<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-28 16:46:41"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U574992" ref_strand="+" ref_description="SGN-U574992 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157348154|emb|CAO22864.1| (e_value=1e-67) unnamed; (*ATH) AT3G50670.1 (e_value=1e-69) | Symbol: None | U1 small nuclear ribonucleoprotein 70 (U1-70k) | chr3:18837281-18840568 REVERSE | Aliases: T3A5.50; (*SWP) sp|Q42404|RU17_ARATH (e_value=1e-68) U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana GN=RNU1; ">
      <seq>tccaatcgtccgattaacgtaactccacttcttggggcggcgattcccatctagcaaaaaccctagtcggcttcaatgggagacttcaacgatgccttcatgcggaacaaccctaacgttcaggcccgtgcaaaggcccagaatcgcgctaatgtcatgcaactcaagctgattggtcaaagtcatccaactgggttgactgctaatcttctgaagttgtttgagccccgaccacctttggagtacaaaccaccccctgagaagagaaaatgcccttcatatactgggatggcacaatttgttagtaacttcgctcaacctggtgatccagaatatgctccaccaatccctgaggttgaaaccccgactgaacgaagagctaggatccacaagatacggctggaggagggtgctaaaaaggctgctgaggagcttgaaaaatatgatcctagcagcgacccaaatgctaccggggatccatacaagacactatttgttgcaagacttaattatgagacaacagaaagcagagtcaaacgcgaatttgaggcttatggtccaatcaagcgggttcgcttggttatggacaagacaaacaataaacccaggggttatgctttcattgagtatgtgccatacacgggatatgaaagctgcgtataaacaagctgatggaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="667" stop="5268"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="967" g_stop="1137" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="1138" i_stop="1913" i_length="776">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="1914" g_stop="2028" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="286" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2029" i_stop="2114" i_length="86">
            <donor d_prob="0.768" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2115" g_stop="2194" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="366" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="2195" i_stop="2913" i_length="719">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="2914" g_stop="2989" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="442" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="2990" i_stop="3069" i_length="80">
            <donor d_prob="0.606" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="3070" g_stop="3134" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="507" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="3135" i_stop="3248" i_length="114">
            <donor d_prob="0.950" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="3249" g_stop="3311" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="570" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="3312" i_stop="4786" i_length="1475">
            <donor d_prob="0.866" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="4787" g_stop="4868" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="571" r_stop="653" r_length="83" r_score="0.976"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="4869" i_stop="4942" i_length="74">
            <donor d_prob="0.719" d_score="0.96"/>
            <acceptor a_prob="0.943" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="4943" g_stop="4968" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="679" r_length="26" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U574992" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U574992" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="967" e_stop="1137"/>
          <exon e_start="1914" e_stop="2028"/>
          <exon e_start="2115" e_stop="2194"/>
          <exon e_start="2914" e_stop="2989"/>
          <exon e_start="3070" e_stop="3134"/>
          <exon e_start="3249" e_stop="3311"/>
          <exon e_start="4787" e_stop="4868"/>
          <exon e_start="4943" e_stop="4968"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTGGTAAGTTATAACCCTCGATCTGTTGTCTTTGTTGTTTACTGGCTTAGATTGTTAAACTAGGCCTTTTTTTTGTGTTAGTGTTTTTTGATTGTTTAGGTTTTCCGTAGGTTCTTTCTTGATGAGTATTAGGTTATAAATTTAGATGATTTTATGTCCTGTTGCTACAATTTGTTTGGTCTTTCGTTATTCAGCAAAGGAAAAATTAGAGTAGAAGTGAAGTACCGATATAGACTATACCGACTTGTTGGGATTATGGTCTAGTCAGTTGTTGTTGGTAAACTCATATTAAGTCCCTCTCTTAATTTGGTTGGGGATTCTCAATGTCGATTTATTTATAATCTTAGGTACCTATAATCTTTCCCAAAATATTAATTGTATGATACTGGGGGAAACAGACCTGGATGGAGTGGAATTGATGTGGATTCATATGTCAACCCCCAAGTTGTTGGTTTCTTGATGTCTTGGTGATTTGTTATTATGGGTAGTGAGTAAGGTTTTGTGGTTTAATTCTTGTTTCGTGATATTTTAGAACTCGTCCAGTTCCAACTCAAGGTTCATTATTTTTGTTTTTTGTGAAATGAGATTCGAAATTGTCTAAGATGCATATTTGTTGTGCTTTTATGACATCTAAATATACTGTGTGATTAGATAGTTGGCTTAGAATAACAGTAGAACTATGTTGTCAGGCTGCTGCACTATTGGATATCCTTTTCTTTGTTCTTCACTGGTGCTACAAGTTTGTGTACTAACTTTGTTAATATACTTAATATATGCAGATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTGGTTAACATTCTTCATGGATTGAGTCATTTCTTGTTCCATCAGTCATCTCGTATAATTCTTAGATATATTCTCATTTCTCTTTTTAGGGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCGGTAAGACTTCATTTTATGTACTGCAAATTTTTTTTCTGATCTTTTTGGGTAAGCCGATATATTTAATTGAGGGTTGCATATTCATTCTTCTCCCTTCTTCTTCTCTTAACAGTGATATTAATTTCATGAATATGATGTTTGCTTGATTATTTATGTGTGCTCTGCCATTTCATGTGCTGCTGAATTGTTTTCTATTTCGAGATGAATGAATCTTGAATGTCCAGCAAATGACACTAAAACATTGTGTTGTTGTTGAATTATTGGTAATATCATGTCTTGTTCTTTATCTTTTTCTTTAGGGTACTTCTTTAGTTCTGTGTTTTATGTTTGTCTTCACTGAATAATGCAAAGATGTCCTGTGTAATGGGAAGGTGCTATTATCATCTCTCCAAGTTGTAGAGCTGTTGTAACCATTGGATCTCATCTTAGAAGATACTGTTGTCTCCCCAAGTCAGTGGAGCTGAAACTGTTGTAAATTGGTAGTGCATGTAGTTAGAGTAGTGCATTATAATTACTATTTAACTTGAGATGTGGGTTATCTAATCCAACTCATTTGGGATTGAGACAGTTATATCCTTTGGTATCCAACCGGTTCTGAAGAGTTACTTTTTCCAGAAAAGTATAATAAGATGTAACATAAGCTGTGCAATTACATACTATGGTGAATCTGTGTATATTTTTTCTTTATGCTCATAGATTGCTTTTGGTACTGCATGCAGACTGAACGAAGAGCTAGGATCCACAAGATACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAATGTATCAAGTGCTTAAATTTTCTGAATATTTGAGAGACATTTATGGGAAAAATGGAATAATTTTTTATTTCTGCTGGACAGATGATCCTAGCAGCGACCCAAATGCTACCGGGGATCCATACAAGACACTATTTGTTGCAAGACTTGTGAGTGAAGATCTTTTTAGATCATTTTTGCTGCTGTGAATATAATCTTTTTCTTTTTTTTTGACAATGGAATATCTCCTTAATTTTGTTGATTGTCTTTTACATGTTTTTCAGAATTATGAGACAACAGAAAGCAGAGTCAAACGCGAATTTGAGGCTTATGGTCCAATCAAGCGGGTAGGTATTATAGAGCATCCCTTTTGGGGCTCAGGTTACTGGCTTTTGGTTGGTAAGATGTGTACTTTTATGGTGGCATGGTACTTCCTCCGTTTCTCAAATTGATATTTCCACAACTTATTATTTCTTAAAGCATAGAACATCTTACGATTTTAGCAGCTTCTCTTTATGTACTTCATAAAAAAAATTAGCATCTTATTAAAACAGATTTTGATAACCAAAATTTAAAGAACTGTGGGGTCGATACACTTTCTGAAATGAGGGTGGATTACCTAAAAGGAAGTGTCACTCATTACTCTTCTAAGTTTCAAACTTCCACTTAAAGGTGCATGCGATTCACATTCTGTGTATAAACTTATAGCATGGATTGCACTTCAGTATTTTGATAAGAACTTATTGAATTCGGCAGTTGTCTGTTAAATAATAAACTGATTAGCTCTCGACTTTCTTAGTGCTTCAGATCATCAAAAAACACGTTTTATCCGGAGAACTTTTTTTTCAATTGTATCTTTGGGTGCATCTCTTCAGGCTGTAGTTAAGAAATGGATTGTTTTTTAAACTGCTAGCACTCTTCCCTGGTGTTCGAGGTGCATACTGCTCTCTGAAAATGGGTGATTTTTTTTGTGAAGTTACTAGTTTTTCTTTGCTTTGTAAAATAAAGGTCAGATTGCCAGTATGCCCTTCCTCAGGTAACAGTACTCCAATTATTGAGTATCAGTTTGATGCCTTTATCCTCTTATCCTGGTTTGGATATCATTAGTTTCAAGTACTATTCATTCTGGTATTCCTTTAGTTTCTAGAACCACAAAGGTAAAGATGTTCAACTCCTAGGTATTTTCCTGGTAAGGGTAAAACTTAATTATCTGGTAGCTTTATGTTTTTTTGAGTTGCCAAACATAACCATTCAATTTCCAAGTCCGAGCTACATTACATGAAACAAAGCTGAACACTTAGATGAGCAGAGCAATGATGCAATATATCTTTGGCCTCTTATTCCAAGCAACACCGGAGATTGATACTTGCCTTTACTTGGTAAAAAAACTGTTGGGAGTATCGACCTTTTCTCTTCTTTACTCTTCTTACATCCCATCTATGCTGCTAAGATTTTACTTTTGGATTCAAAGGCTATCAAAAAAGTTTCAAGCATTTCAGGAGACACCTGGTATTTGACTATACTTCTATAATAATTTATTTTATTTTAAAATGTTCCCTGGTAAGGGGAGTTAGAATATATTGCAAACATAAGGCCACAGTTCTTGTGCAACTCTAGCAGTGATGGTGAAGCATCTCGCCTGGGAGCTCTTTGATTCAAAGGTGAGCACGGCTAATTAGGCATAGTGCCTGCCGTGCCATTAGGAGCTTACTATACCTAATCGCGTTGAGTAGATAAAAAACATTAACTTTTTTGACCGCTGCATCGAAAATGATTATAATGTTATTAGTAGTGTCAATTCCATAAATTGTTTGAGTTTCAGGTTCGCTTGGTTATGGACAAGACAAACAATAAACCCAGGGGTTATGCTTTCATTGAGTATGTG-CATACACGGGATATGAAAGGTTTCTCTAAACTCCTGTTCTTCTGTCTTTTCGAAGTCTCACTTCCATCTCTAATTCTTTTGGATATAATTCAGCTGCGTATAAACAAGCTGATGGAAAG</genome_strand>
        <mrna_strand>TCCAATCGTCCGATTAACGTAACTCCACTTCTTGGGGCGGCGATTCCCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTG......................................................................................GGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAACGAAGAGCTAGGATCCACAAGATACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAAT................................................................................ATGATCCTAGCAGCGACCCAAATGCTACCGGGGATCCATACAAGACACTATTTGTTGCAAGACTT..................................................................................................................AATTATGAGACAACAGAAAGCAGAGTCAAACGCGAATTTGAGGCTTATGGTCCAATCAAGCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGCTTGGTTATGGACAAGACAAACAATAAACCCAGGGGTTATGCTTTCATTGAGTATGTGCCATACACGGGATATGAAAG..........................................................................CTGCGTATAAACAAGCTGATGGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U582681" ref_strand="+" ref_description="SGN-U582681 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>tgcaggacagtccccaattggcgtccacgcagacttggtggcggacttggaacaacaagagttggaaatgaagatgctactagagaggcggttcagcctggaagggcagcatctcgctctgaggagccaagagcacgagatgacagggatagggatcgggagaagtcccgtgaaagggtgcgagataaggacagagagaaatctcgtgagcgttctcatgacaggccaagggaacgtgaaagagatgacaaacatcatagggaacgcgagagaaccagagaaagagaaaaagatcgtggtcgtgaccgtgatcgagaccgcgaacgtgatagagaatatgattatgagcatgttgattcaaaacacgagcgagaccgacacggtgacaaagagaggaattatgatcctgcagaacctgaagatgatcatggacattatgactattatgatcaccaccaaggtcgaggagattatgagaatccagatgcacaaggtggggatgatcgctataaagatgccagtcgtggtcatgatcgttatgatcaaatggaagaggataattatgcttatgaccacggggcatctgagacaaaagaaagggatcgggattacaagcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="4709" stop="6688"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5008" g_stop="5090" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5091" i_stop="5534" i_length="444">
            <donor d_prob="0.937" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5535" g_stop="5603" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="152" r_length="69" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5604" i_stop="5787" i_length="184">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5788" g_stop="5960" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="325" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5961" i_stop="6095" i_length="135">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="6096" g_stop="6388" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="618" r_length="293" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U582681" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>618</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U582681" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5008" e_stop="5090"/>
          <exon e_start="5535" e_stop="5603"/>
          <exon e_start="5788" e_stop="5960"/>
          <exon e_start="6096" e_stop="6388"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTAGAACAGTCCCCAATTGGCGTCCCCGCAGACTTGGTGGTGGACTTGGAACAACAAGAGTTGGAAATGAAGATGCTACTAGGTATTGCATGAACTTGTCATATGTGCATTGCATAGTGCTATAACGGACATTGATCTCAGCTCTTCTTTAGTGCAATAATGGTTCCTGTAGTGTCTATGGAGTAAGAACGCTATTTTGATAGATACAGCAAGACATGTTTGCTTGTAGTTGACATGAACTGCTTTTTTGAATTTCAACTCATCTTTTGGGTTATATGGATGCTTCAGTTTGTGTTTTTTTCCCTATAAAGGACTTGCTGCTCTGAGCATTTATGTATGACGTCTTGCTTAGAAGTTGAATTTATTATTGTTTGGCATTCAGTTTGATAATTACTCGTAAAATGTTCTTAAAAGTAGTTTTTTTTTTGTGTAGTTGCCCTCTTGGTATGATTGTAAAAGTGAAAAGCTTAAATTCTTGGATGGAATTTTAATTATTGAAGACTCTAATACTCCTTTTATTTTTCAGAGAGGTGGTTCAGCCTGGAAGGGCAGCATCTCGCTCTGAGGAGCCAAGAGCACGAGATGACAGGGATAGGTAACAACCTAGGCATTTATAGCTTATGCTTGCTTTGAGTTTCTTTCTCCCAATTTGACTCCCAGACAAATTTCTACTTCTCCAAGGATGAGTTGTCTGATTTACTACTCTGTTTAGTTTAAATGTGAGTTAATACTATAATGTGTTTCACGTCTAATACAATTATGAATTCCCATATTAGCAGGGATCGGGAGAAGTCCCGTGAAAGGGTGCGAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGGCCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAGAGAACCAGAGAAAGAGAAAAAGATCGTGGTCGTGACCGTGATCGAGACCGCGAACGTGATAGGACACGTGACCGTGAGCGAGGCAAAGACAGAGACCGGGATGGTCACCGTGAGCGAGATCGTCACCGTGAGAAGGACAGGGAAAGAGGTAGGGATGAAGGTGAGGTTGACCAGGGTCGTGGGCGTTCTCGTGATAGAGAATATGATTATGAGCATGTTGATTCAAAACACGAGCGAGACCGACACGGTGACAAAGAGAGGAATTATGATCCTGCAGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCACCAAGGTCGAGGAGATTATGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGT</genome_strand>
        <mrna_strand>TGCAGGACAGTCCCCAATTGGCGTCCACGCAGACTTGGTGGCGGACTTGGAACAACAAGAGTTGGAAATGAAGATGCTACTAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGGCGGTTCAGCCTGGAAGGGCAGCATCTCGCTCTGAGGAGCCAAGAGCACGAGATGACAGGGATAG........................................................................................................................................................................................GGATCGGGAGAAGTCCCGTGAAAGGGTGCGAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGGCCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAGAGAACCAGAGAAAGAGAAAAAGATCGTGGTCGTGACCGTGATCGAGACCGCGAAC.......................................................................................................................................GTGATAGAGAATATGATTATGAGCATGTTGATTCAAAACACGAGCGAGACCGACACGGTGACAAAGAGAGGAATTATGATCCTGCAGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCACCAAGGTCGAGGAGATTATGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U602892" ref_strand="+" ref_description="SGN-U602892 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>cacataacaaacacattaccgggcacacatccccaataaattcgcatttaacaagtcacattagaactcagcaagtaatttaccaaacaattccaaaagaagatacaaaattcaaaacatgggctgatgcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="-" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="7086" stop="6355"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6786" g_stop="6655" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="132" r_length="132" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="-" ref_id="SGN-U602892" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>132</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U602892" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6786" e_stop="6655"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACATAACAAACACATTACCGCGCACACATCCCCAATAAATTCGCATTTAACAAGTCACATTAGAACTCAGCAAGTAATTTACCAAACAATTCCAAAAGAAGATACAAAATTCAAAACATGGGCTGATGCGC</genome_strand>
        <mrna_strand>CACATAACAAACACATTACCGGGCACACATCCCCAATAAATTCGCATTTAACAAGTCACATTAGAACTCAGCAAGTAATTTACCAAACAATTCCAAAAGAAGATACAAAATTCAAAACATGGGCTGATGCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U597385" ref_strand="+" ref_description="SGN-U597385 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157348153|emb|CAO22863.1| (e_value=2e-37) unnamed; (*ATH) AT2G25737.1 (e_value=1e-29) | Symbol: None | expressed protein, contains Pfam profile: PF01925 domain of unknown function DUF81 | chr2:10984014-10986978 FORWARD | Aliases: None; ">
      <seq>gaaaggatattcaagcatacaaattaaaagtttgtttctgctcttttaattcccctcaggttcttcaaagtggaatatatatagaagtagccaatttattacctcagaggaagctacttctatatatatttcttaattaaggctatttgagttgaactttttatgatggctaatgaagagataaaaaagagaatgaaggcgtttttcgtatcagcagtatggatactatgctggggattattcataataagcgaagctgggattaatgcagaaaggcttactctgaaggataaattagagccagctgctacttataacattagttatgtagagaataatgagatgagaccacaaacctttgcagtaaggcttgtgcattttctgtggagtggaaagtcctcttatgagcacgtttggccggagatggagtttggatggagagtaattgttggatccattgtgggattctttggtgctgctttgggaagcgttggaggggttggcggcggtggaatttttgttccaatgctaactcttattattggctttgatccaaaatcatctacagctatatccaagtgcatgataatgggagcagctggatcaacagtgtactacaacatgaggctgaggcacccaactctagatatgcctataattgactatgatttggctttgctcttacaacctatgctcatgcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="10671" stop="12243"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10971" g_stop="11390" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="420" r_length="420" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11391" i_stop="11576" i_length="186">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11577" g_stop="11736" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="580" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11737" i_stop="11820" i_length="84">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11821" g_stop="11943" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="581" r_stop="703" r_length="123" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U597385" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U597385" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10971" e_stop="11390"/>
          <exon e_start="11577" e_stop="11736"/>
          <exon e_start="11821" e_stop="11943"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGGATATTCAAGCATACAAATTAAAAGTTTGTTTCTGCTCTTTTAATTCCCCTCAGGTTCTTCAAAGTGGAATATATATAGAAGTAGCCAATTTATTACCTCAGAGGAAGCTACTTCTATATATATTTCTTAATTAAGGCTATTTGAGTTGAACTTTTTATGATGGCTAATGAAGAGATAAAAAAGAGAATGAAGGCGTTTTTCGTATCAGCAGTATGGATACTATGCTGGGGATTATTCATAATAAGCGAAGCTGGGATTAATGCAGAAAGGCTTACTCTGAAGGATAAATTAGAGCCAGCTGCTACTTATAACATTAGTTATGTAGAGAATAATGAGATGAGACCACAAACCTTTGCAGTAAGGCTTGTGCATTTTCTGTGGAGTGGAAAGTCCTCTTATGAGCACGTTTGGCCGGTAAGATTATAGAGAGCATATTTTGTTTACTCAATATCAACATGAAAATATATATGACTTGTTTTAGATTACTAGTTTCAAAAATCTTTTTTTTATTTCTCAAATTCCGTAACCTGACAAACAACATGATCACATAAAAAGTAGTAATGAAATGTAAATAATGTTTTTTCCTTTGGGAGCTTGCAGGAGATGGAGTTTGGATGGAGAGTAATTGTTGGATCCATTGTGGGATTCTTTGGTGCTGCTTTGGGAAGCGTTGGAGGGGTTGGCGGCGGTGGAATTTTTGTTCCAATGCTAACTCTTATTATTGGCTTTGATCCAAAATCATCTACAGCTATATCCAAGTGTAAGTATTTATGTACCATATACTAACATGTAGTTAGTATGTATATTTGTGAAACAGTACTAAACTATATTGATTTTGTTAAAGGCATGATAATGGGAGCAGCTGGATCAACAGTGTACTACAACATGAGGCTGAGGCACCCAACTCTAGATATGCCTATAATTGACTATGATTTGGCTTTGCTCTTACAACCTATGCTCATGCTTG</genome_strand>
        <mrna_strand>GAAAGGATATTCAAGCATACAAATTAAAAGTTTGTTTCTGCTCTTTTAATTCCCCTCAGGTTCTTCAAAGTGGAATATATATAGAAGTAGCCAATTTATTACCTCAGAGGAAGCTACTTCTATATATATTTCTTAATTAAGGCTATTTGAGTTGAACTTTTTATGATGGCTAATGAAGAGATAAAAAAGAGAATGAAGGCGTTTTTCGTATCAGCAGTATGGATACTATGCTGGGGATTATTCATAATAAGCGAAGCTGGGATTAATGCAGAAAGGCTTACTCTGAAGGATAAATTAGAGCCAGCTGCTACTTATAACATTAGTTATGTAGAGAATAATGAGATGAGACCACAAACCTTTGCAGTAAGGCTTGTGCATTTTCTGTGGAGTGGAAAGTCCTCTTATGAGCACGTTTGGCCG..........................................................................................................................................................................................GAGATGGAGTTTGGATGGAGAGTAATTGTTGGATCCATTGTGGGATTCTTTGGTGCTGCTTTGGGAAGCGTTGGAGGGGTTGGCGGCGGTGGAATTTTTGTTCCAATGCTAACTCTTATTATTGGCTTTGATCCAAAATCATCTACAGCTATATCCAAGT....................................................................................GCATGATAATGGGAGCAGCTGGATCAACAGTGTACTACAACATGAGGCTGAGGCACCCAACTCTAGATATGCCTATAATTGACTATGATTTGGCTTTGCTCTTACAACCTATGCTCATGCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U599720" ref_strand="+" ref_description="SGN-U599720 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157348153|emb|CAO22863.1| (e_value=2e-57) unnamed; (*ATH) AT2G25737.1 (e_value=5e-45) | Symbol: None | expressed protein, contains Pfam profile: PF01925 domain of unknown function DUF81 | chr2:10984014-10986978 FORWARD | Aliases: None; ">
      <seq>ggggatgcttcgcaacgtttactggaaagaattgggacttctaatgtttgtttgggtggctttccttgctattcaagttgtcaagacctacaccgtgacatgctccatcgggtactggattttaaatttattgcaggtacctgttgctgtttcggtttcgttgtatgaagcaatatgtctgtacaaggggacaagggtgattgcatcaaaaggaaaggagataacaaactggaagccacatctactcttcttttactgttgttgtggcatagttgctggtattgttggcggattgcttggtctcggaggtggcttcatccttggaccactgtttctagaacttggaattcctcctcaggtagcaagtgcaacatcaaccttttcaatgactttctcatcctctatgtcagttgtgcaatattacctattgaagcgtttccctgttccatacgctacttatttcgtttcaatagcaacaattgctgcagtagttggtcaacacgttataanaanagtanttgcactgcttggaagagcctctataatcatattcntactggncatgacaatanttaccagtgcaatcagcttnnnnggtgtgggganagcaaatatgatagagaanctnaannnnngactatatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="12342" stop="14126"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12638" g_stop="12722" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12723" i_stop="12819" i_length="97">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12820" g_stop="12870" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="136" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12871" i_stop="12956" i_length="86">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12957" g_stop="13178" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="358" r_length="222" r_score="0.995"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13179" i_stop="13373" i_length="195">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.413" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13374" g_stop="13467" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="452" r_length="94" r_score="0.989"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13468" i_stop="13566" i_length="99">
            <donor d_prob="0.843" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="13567" g_stop="13707" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="593" r_length="141" r_score="0.943"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="13708" i_stop="13789" i_length="82">
            <donor d_prob="0.998" d_score="0.90"/>
            <acceptor a_prob="0.999" a_score="0.76"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="13790" g_stop="13843" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="594" r_stop="645" r_length="52" r_score="0.778"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U599720" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U599720" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12638" e_stop="12722"/>
          <exon e_start="12820" e_stop="12870"/>
          <exon e_start="12957" e_stop="13178"/>
          <exon e_start="13374" e_stop="13467"/>
          <exon e_start="13567" e_stop="13707"/>
          <exon e_start="13790" e_stop="13843"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCATGCTTCGCAACGTTTACTGGAAAGAATTGGGACTTCTAATGTTTGTTTGGGTGGCTTTCCTTGCTATTCAAGTTGTCAAGGTAAACAATAATCTTTCTAGTCTCCAACACATACTCATGGTGTATATGCTGCTTCTTTATTTTTATACCAAAGGTTTATTCATTTTTTTGCTTGCAGACCTACACCGTGACATGCTCCATCGGGTACTGGATTTTAAATTTATTGCAGGTAATTCCCATTTAGTTTGGGAATTAAGACAAAAACTTTTTTGAATGAGCAAGAAGGATGACGATTTGATATATGTGTTAAATTAGGTACCTGTTGCTGTTTCGGTTTCGTTGTATGAAGCAGTATGTCTGTACAAGGGGACAAGGGTGATTGCATCAAAAGGAAAGGAGATAACAAACTGGAAGCCACATCTACTCTTCTTTTACTGTTGTTGTGGCATAGTTGCTGGTATTGTTGGCGGATTGCTTGGTCTCGGAGGTGGCTTCATCCTTGGACCACTGTTTCTAGAACTTGGAATTCCTCCTCAGGTACATGTTGCCTTTTAATACTCCATATATTCTATCTGCTTCTTCCCTGTTTCTTCTTTCTTGTACCTATACAATAACTCTGTTCATGTAAAACCAATCGTGTTTAACTTCCATACATTGACAGTCGGGTAATACAATAACTATTACTCACAATAAGTACTCGAATTGACAAAGTGATCAAAACAAATATGGCAGGTAGCAAGTGCAACATCAACCTTTTCAATGACTTTCTCATCCTCTATGTCAGTTGTGCAATATTACCTATTGAAGCGTTTCCCTGTCCCATACGGTACGCAACATAGACAAAAAAAAATTATGAAGAAATTATCTTCACTATAACTACCTTACGAAGAAATTTAATCTTGACAGTTTATATTTCAAAATGCAGCTACTTATTTCGTTTCAATAGCAACAATTGCTGCAGTAGTTGGTCAACACGTTATAAGAAGAGTAATTGCACTGCTTGGAAGAGCCTCTATAATCATATTCATACTGGCCATGACAATATTTACCAGTGCAATCAGCTTAGGTATAAATCATCTTTCATCCTGTCAATTGCTTCTTTCTGTTTTCTGAGCCTTAAAAATAACCTTATGTTGGATAACTGGCAGGTGGTGTGGGGATAGCAAATATGATAGAGAAGCTGAAGAACAATGACTATATGG</genome_strand>
        <mrna_strand>GGGGATGCTTCGCAACGTTTACTGGAAAGAATTGGGACTTCTAATGTTTGTTTGGGTGGCTTTCCTTGCTATTCAAGTTGTCAAG.................................................................................................ACCTACACCGTGACATGCTCCATCGGGTACTGGATTTTAAATTTATTGCAG......................................................................................GTACCTGTTGCTGTTTCGGTTTCGTTGTATGAAGCAATATGTCTGTACAAGGGGACAAGGGTGATTGCATCAAAAGGAAAGGAGATAACAAACTGGAAGCCACATCTACTCTTCTTTTACTGTTGTTGTGGCATAGTTGCTGGTATTGTTGGCGGATTGCTTGGTCTCGGAGGTGGCTTCATCCTTGGACCACTGTTTCTAGAACTTGGAATTCCTCCTCAG...................................................................................................................................................................................................GTAGCAAGTGCAACATCAACCTTTTCAATGACTTTCTCATCCTCTATGTCAGTTGTGCAATATTACCTATTGAAGCGTTTCCCTGTTCCATACG...................................................................................................CTACTTATTTCGTTTCAATAGCAACAATTGCTGCAGTAGTTGGTCAACACGTTATAANAANAGTANTTGCACTGCTTGGAAGAGCCTCTATAATCATATTCNTACTGGNCATGACAATANTTACCAGTGCAATCAGCTTNN..................................................................................NNGGTGTGGGGANAGCAAATATGATAGAGAANCT-NA-ANNNNNGACTATATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U581967" ref_strand="+" ref_description="SGN-U581967 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>ctggcaaggaaaaattccttggtttcatgaacttacaaatgacccataccaatcttagattatttacatgctcctctataacataatattgtacttgttctcatccaaaaagaaatatatgcaagttgttgagaagagaggggaaaaaatatatcagaggcagcctccttgttccaatctgtataggtatgagttgagctcagtttctaacttgagctcatttgacaaaatcttggttgttcaatattgttgtactaaaatcagataaatgtaccaaaaaatcacaaagataagaggagaaagattggagatattttcttgtaagagcctctatccatgcattattaaccctcatttctacgtctgtatgtccagtttactcgtcgagcagtatcttttccttggtttcttgtttaaatggttgagtaatcaaacttgtggtactgcaaattttccaactctcggagataaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="23519" stop="24590"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23819" g_stop="24290" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="472" r_length="472" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U581967" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U581967" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23819" e_stop="24290"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGCAAGGAAAAATTCCTTGGTTTCATGAACTTACAAATGACCCATACCAATCTTAGATTATTTACATGCTCCTCTATAACATAATATTGTACTTGTTCTCATCCAAAAAGAAATATATGCAAGTTGTTGAGAAGAGAGGGGAAAAAATATATCAGAGGCAGCCTCCTTGTTCCAATCTGTATAGGTATGAGTTGAGCTCAGTTTCTAACTTGAGCTCATTTGACAAAATCTTGTTTGTTCAATATTGTTGTACTAAAATCAGATAAATGTACCAAAAAATCACAAAGATAAGAGGAGAAAGATTGGAGATATTTTCTTGTAAGAGCCTCTATCCATGCATTATTAACCCTCATTTCTACGTCTGTATGTCCAGTTTACTCGTCGAGCAGTATCTTTTCCTTGGTTTCTTGTTTAAATGGTTGAGTAATCAAACTTGTGGTACTGCAAATTTTCCAACTCTCGGAGATAAA</genome_strand>
        <mrna_strand>CTGGCAAGGAAAAATTCCTTGGTTTCATGAACTTACAAATGACCCATACCAATCTTAGATTATTTACATGCTCCTCTATAACATAATATTGTACTTGTTCTCATCCAAAAAGAAATATATGCAAGTTGTTGAGAAGAGAGGGGAAAAAATATATCAGAGGCAGCCTCCTTGTTCCAATCTGTATAGGTATGAGTTGAGCTCAGTTTCTAACTTGAGCTCATTTGACAAAATCTTGGTTGTTCAATATTGTTGTACTAAAATCAGATAAATGTACCAAAAAATCACAAAGATAAGAGGAGAAAGATTGGAGATATTTTCTTGTAAGAGCCTCTATCCATGCATTATTAACCCTCATTTCTACGTCTGTATGTCCAGTTTACTCGTCGAGCAGTATCTTTTCCTTGGTTTCTTGTTTAAATGGTTGAGTAATCAAACTTGTGGTACTGCAAATTTTCCAACTCTCGGAGATAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U600903" ref_strand="+" ref_description="SGN-U600903 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157335336|emb|CAO61166.1| (e_value=7e-79) unnamed; (*ATH) AT2G18460.2 (e_value=9e-81) | Symbol: None | expressed protein, contains Pfam domain, PF04367: Protein of unknown function (DUF502); contains non-consensus splice sites | chr2:8008393-8009949 FORWARD | Aliases: None; ">
      <seq>gtattcatttttggggaagaagaaggagggagatctataatggcgacgccaagagcagatagggaattagagcttctcataccaatgggaggcgttgagaatattaatgctagtcactccaaatcttcttctccttctcattcccctaagattccatcttcttctaggtctcatcactcttctggcaaagaggcatttagcaaagttattcgtagctggacttggaaaaagttcatcagcggatgtgtcatcttatttcccatagccataactttttacatcacctggtggttcattcattttgtggatgccttcttttccccgatctataaccaccttggaatcaatgtatttggccttggatttgttacctccatgactttcatcttcttcgttggggtgttcatgtcctcatggttaggtgcatctcttcttagtttaggagagtggttcataaaaaaaatgcccctcatgagctacatctactctgcctccaagcaaattagctcagcaatttcaccagataaaacttcacatgccttcaaagaagtggccataataaggcatccgcgtcttgntgaatatgcatttggttttatcacttcaacagtcatacttcacaagcattcnngtgcagaggaactctgctgtgtttatgtgccaactaatcacctctatcttggnnatatctttcttgngaattctaaanacgttatgaggnccnatctctctgntcganagggtatagaaattgtaatctccgggggca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="-" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="26271" stop="24034"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25972" g_stop="25781" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25780" i_stop="25494" i_length="287">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25493" g_stop="25441" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="245" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25440" i_stop="25337" i_length="104">
            <donor d_prob="0.655" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25336" g_stop="25227" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="355" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25226" i_stop="24911" i_length="316">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.924" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24910" g_stop="24743" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="523" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="24742" i_stop="24672" i_length="71">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="24671" g_stop="24447" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="524" r_stop="748" r_length="225" r_score="0.951"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="24446" i_stop="24355" i_length="92">
            <donor d_prob="0.997" d_score="0.90"/>
            <acceptor a_prob="0.940" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="24354" g_stop="24334" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="749" r_stop="769" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="-" ref_id="SGN-U600903" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>769</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U600903" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25972" e_stop="25781"/>
          <exon e_start="25493" e_stop="25441"/>
          <exon e_start="25336" e_stop="25227"/>
          <exon e_start="24910" e_stop="24743"/>
          <exon e_start="24671" e_stop="24447"/>
          <exon e_start="24354" e_stop="24334"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATTCATTTTTGGGGAAGAAGAAGGAGGGAGATCTATAATGGCGACGCCAAGAGCAGATAGGGAATTAGAGCTTCTCATACCAATGGGAGGCGTTGAGAATATTAATGCTAGTCACTCCAAATCTTCTTCTCCTTCTCATTCCCCTAAGATTCCATCTTCTTCTAGGTCTCATCACTCTTCTGGCAAAGAGGTTTCTCTCTATCATTCATACGCCATTTTGTTATCATCAATCTGATCCGTTACATTTCTCATTATATTTTCTATGGGTTAATCTGAAGCTTATTAGACTATATATAACATGAATCCTGTATTTGCCTTGACGTACTTGTATCAAATGTGCGCTTATTATTTCATGAAAATTCTCCATAAAAAATTGCGCAAAATCACAGTGATTACTTATATACTGAATTTCTATCCGGAAATCAGTCCAGGTAACATAGAGCTTGAATTGTGATGAATTTTTATCTGTCTATGCAGGCATTTAGCAAAGTTATTCGTAGCTGGACTTGGAAAAAGTTCATCAGCGGATGGTTAGTTTTGTATTGTTCAGAAATCTGTTCCTCCTGTTGTTATGCAGTGCTTTTCTCTTTGCTGAATGGTTTATTTGCATGAATGTTCTATAATTGTTTTGCAGTGTCATCTTATTTCCCATAGCCATAACTTTTTACATCACCTGGTGGTTCATTCATTTTGTGGATGCCTTCTTTTCCCCGATCTATAACCACCTTGGAATCAATGTATTTGGTTAGTACCTACGATCTTTATGTATTCATCTATTTAACTGTACAAAAACTGATGAAGATTAAGATTAAGATGGTTTTAAGTGTTGAATGACTGTGTGCGCGCGCCTCTCATTTTATGTATGCATACCGATACGTCTCTCCAATTTGAGTGCCTGTATTCTATATTACCATATTTAATTTGAGTATGTGGATGCTCTTCTGAGAAATGTCTACATGAAGTACTTTCAGTATCTGGTCTTTCTTTTGAGCATGAAAAGATTTATTGCTGTTGTTAAATGCACATTACATTTATGGTTAGTGTTCATATTAATTCACAGGCCTTGGATTTGTTACCTCCATGACTTTCATCTTCTTCGTTGGGGTGTTCATGTCCTCATGGTTAGGTGCATCTCTTCTTAGTTTAGGAGAGTGGTTCATAAAAAAAATGCCCCTCATGAGCTACATCTACTCTGCCTCCAAGCAAATTAGCTCAGCAATTTCACCAGGTATTCTACCAAAATTTGAAATTATGTTTGAACATTCCAAATACTAAACAGAATGTAGCAATTGTTTCCAGATAAAACTTCACATGCCTTCAAAGAAGTGGCCATAATAAGGCATCCGCGTCTTGGTGAATATGCATTTGGTTTTATCACTTCAACAGTCATACTTCACAAGCATTCAGGTGCAGAGGAACTCTGCTGTGTTTATGTGCCAACTAATCACCTCTATCTTGGAGATATCTTTCTTGTGAATTCTAAAGACGTTATGAGGCCCAATCTCTCTGTTCGAGAGGGTATAGGTAAGAGTCTAAATTCGAGCTTTTTGACAAACTAACTTTGCAGTTTTTACCTTCATCTCTTTTTAACGACGTTTAAATTTCAAACTATGTAGAAATTGTAATCTCCGGGGGCA</genome_strand>
        <mrna_strand>GTATTCATTTTTGGGGAAGAAGAAGGAGGGAGATCTATAATGGCGACGCCAAGAGCAGATAGGGAATTAGAGCTTCTCATACCAATGGGAGGCGTTGAGAATATTAATGCTAGTCACTCCAAATCTTCTTCTCCTTCTCATTCCCCTAAGATTCCATCTTCTTCTAGGTCTCATCACTCTTCTGGCAAAGAG...............................................................................................................................................................................................................................................................................................GCATTTAGCAAAGTTATTCGTAGCTGGACTTGGAAAAAGTTCATCAGCGGATG........................................................................................................TGTCATCTTATTTCCCATAGCCATAACTTTTTACATCACCTGGTGGTTCATTCATTTTGTGGATGCCTTCTTTTCCCCGATCTATAACCACCTTGGAATCAATGTATTTG............................................................................................................................................................................................................................................................................................................................GCCTTGGATTTGTTACCTCCATGACTTTCATCTTCTTCGTTGGGGTGTTCATGTCCTCATGGTTAGGTGCATCTCTTCTTAGTTTAGGAGAGTGGTTCATAAAAAAAATGCCCCTCATGAGCTACATCTACTCTGCCTCCAAGCAAATTAGCTCAGCAATTTCACCAG.......................................................................ATAAAACTTCACATGCCTTCAAAGAAGTGGCCATAATAAGGCATCCGCGTCTTGNTGAATATGCATTTGGTTTTATCACTTCAACAGTCATACTTCACAAGCATTCNNGTGCAGAGGAACTCTGCTGTGTTTATGTGCCAACTAATCACCTCTATCTTGGNNATATCTTTCTTGNGAATTCTAAANACGTTATGAGGNCCNATCTCTCTGNTCGANAGGGTATAG............................................................................................AAATTGTAATCTCCGGGGGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U574325" ref_strand="+" ref_description="SGN-U574325 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|115454529|ref|NP_001050865.1| (e_value=8e-15) Os03g0669600; (*ATH) AT1G76185.1 (e_value=1e-12) | Symbol: None | expressed protein | chr1:28595219-28596412 FORWARD | Aliases: None; ">
      <seq>aatttgtttctcttaataaaatagcatactgtattaacaaaatcttctatcttatttcgtctaactgtgtactggggtcatgcgaatccctctcagtttagcattttcttcttcgttttccttttgcgttggaccagtgtaacagcttattcggagggatcgtttcttcaattgctaatctaccaatacctaggtgtagttcgttgcttctgaatttgcaattggtattgaaggcaaaaattaattgagatcggagaatcaggttttcgatcgttttggttaacatgataacaaggtctaaactggttgagcagctcagagattatcagatccgatctcaacacaagtgccctcctcttactttcttttcaccaaagctttatctctccaactgggctgatgttgcagttgctttattctgcgccttgttatttggtgtgcttatattatcatcatatgtggccctttatttacgacattactggagttcctttctcattataagccttgccattacccttccagtgcgtctgagaatgttacgacaggctcatgcaagaaagaaagtaagacagttacctttgtctatgtgaacttccttctacttctggaagcaccaaacagtggtttaagtgaaaggaataccttttgcacaaaagtgctctccaattgtagtaatacagttctttgatcttcgtcacataggctgaccaatcttctgctgtgaaagatgggacacacccttcatattactcttgatgactcattcattaagaaacaggatttagacgatcaattagcttcctatgaaatgaacaaccagagctcaaggtttcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="27456" stop="34121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27756" g_stop="28149" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="394" r_length="394" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28150" i_stop="33376" i_length="5227">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="33377" g_stop="33821" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="839" r_length="445" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U574325" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>839</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U574325" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27756" e_stop="28149"/>
          <exon e_start="33377" e_stop="33821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTGTTTCTCTTAATAAAATAGCATACTGTATTAAAAAAATCTTCTATCTTATTTCGTCTAACTGTGTACTGGGGTCATGCGAATCCCTCTCAGTTTAGCATTTTCTTCTTCGTTTTCCTTTTGCGTTGGACCAGTGTAACAGCTTATTCGGAGGGATCGTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTGGTACGTCTCCATATTTCTCTCTGTAAATGTATTTATCCCTGCACATAGTAATATCAAGTTTAACAAATTTAGCAGGGAGAAGTTTCTGTTTAGACTTTTATGCTTTTTTTTTTTTATTTAGTTCAATTTATTTGTGTATACCTGAGCTATTTGTACAAAAAAAAACTGATTTTGTGATATTTAATTGTTCGCATTACCTGCCACCAGCAGGAATTTTGGCATGTTTGTAGTCCGATGAGTAGAAATCACTGAGCTATTTTTGTTATTTAACCGTGGTTTTTACTTACTTCATTAACAACTAAGCTACACCTTGTGTGCATTATTTTGAATTTATGAATATGTGATTTGGTAAACTACTTCAGTTATAGATATTTAAGCAGTTCAACTAGAATGTCATAGTTCAATTTATACAAACGATGAATCTAAAGCGTCTGCTGAGGCGTAAAGCCAACCAGCTTTGAATTGCAAAGGCAAAGCGTCTGCTGAGGCATAAAGCCAACCAGCTTTGAATTGCAAAGGCAGTGGACATGGACTCACTAATTCCAAAAAAATTATGATCTGCAATGATTTTGGCTAGACTGAAAGCCACCTTGGGTACAAATTGCTAAGGCATTCTACAAAATAAGAATCTGATCTATCCTGATTTTTTTGATAATTGAGATAATCCTCATACCAATGATACATAATTTGAAACACAGTGAATAATGGGTTTGTTCTTTTATCATTCTCCACTTAATTATCAAGTTATTATTTTTGGCAAGGTTCGAACCTGTGACATATGTATAACCTACACCAGCATTACACTAACAACTAGATCAAAGCCCTAGGGGGCAATTCTCTCCAGATATTTCTCCATCTGTTGAAGTTATTAAAGAGTAACTTTTTGTCTTTCTTTTATCTTGCAATTATTTTATGGTGGAGGAGGAGTCTTGGGTCTTTACTAAGTTTATTGTGGCGACATTCTCTTCTGATGTGGTCACCCAAATTCTGATCACCTTCCTTAAAACTGTGCTACCTCTGCTCTTCCAATATCTTCTTGATTACCAAGTAGCATCTGCTGCTCAGATCCGTTTTCAACCATAAAGCTTGAATGTAGTTTACTGACTTATTCTCCTTTATGGATCTCTCCACGTGATGAGTTCCACCAATACGATTTCTCCCCATAAAGAGGAAATGATTTTTGCATGATCTGGTACTCAAGCTTCTGAATTCACCAAAATTTTTGTCAGTTCAATTTTAGTGGGTTAATCACCTGAAGTTCATGGAATAAATCTATCTTATAAATTAATCCTTGTTGTTTTCTGGTCCATATAATTCTGCTTGGTATATGGTAAAGGAATGTCGGTTTTTGGCCCAATATGTGAAACCTGTTAGTTTGTTGGGCATTGTTAAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGTTCTAAGGGAGGAGAATCGCCCAGGCCTTATAAGGATTCACTTATCTTATTAACCGCAAATGTGGAACTTTTGTCATTCTTTATCACCCAACCTCATGCCCATGCTTAGCATTTGGTGCGTGGGCAATTTTGATTTTGGGGGTCCCAACATTTGGTGAGATGAGTCCTGCTCTGATACCACGTTAAAGTGTGTGACCATCTCATTTAAAAGCTTAAGTGGTTAGATTGAGCATACTTTTATTATTTAATTATATTCTTAACCGGCATCAATAGGAATGGTCGCACTTGTTCTAATTTGATTATTTGAACCTGTAAATGATTGTCAGTTTCCTTTCACACAGCTTTCTTTCATCCTTTCCCATTTGGTCACATCTCTTCCATCCATCTCAGAGATATTTGAACAGGCAAAGAGATACTCTTACACTGAAGAATGCTCCACCCATCTTCTCATTGATGTAGATCATCCCCGCGAATAATATTCTCTGCTAGTTCTGGTCACTGCTCTCCTTTCTTACCTTGCCAGAATCCTTTAAGTTGAACCTACTCTGAGGGAGTTGTTCTTAACGAGTGTTAATGATTTATCCAATACCCGTCCATCTTTCATCCTAGCCTTCTCAGTATCTCAATTCTTCAGAACTTTCCCCCTCTGTCAACTTAAGCCAAGTTGAAACACCTTTTTCATTTAAAGCTTGACCCATCAAAACCCCATCTCTCTCTGTAGTGTTTTATTGCCATAGTTATTTTTGCAAATTTACTAAGCTCTGGCTCCCGAACCAATAGAAACTCATTGTATTTCTTTCTACATATATTTCAAATATCCATTACTTCTACCGAGAGAAGAAACCTCATCCTTAAATACAGACCACCTTTCCTGGATAGGTCTTCCTCTCTATTTTCTGAGATTCCTCGAAGCCCTTGTTGCCTCTGAGTACCACTTCTTTGAAGCTTCCTTTTTTCTCACATATATCCATGCTATTAGTTGACCTATGCCTGTTTGAACAGCCTCGGTTAATTGTTACTGAAATGCCGTTTAGTTGGCTTATGTCTGTTTGAACAACCTCGGTTAATCTTACCTCTTTTTGTTCTCCCAATTGAGTAGAATTGAAATATCACCTCTCCTTTTTTCGTCTGTGAATGTCAATCACTGCACCTTCATCTTCTGATTGTCTAGAACTTTAGATTTCCTATAAGTATATCACTATAGCATCGTGTTCATGTTGGTTATTTAATGTAATTAAGCTTCCATGTCAAATACTTAATATTTTCGCCTTTCCATGTTTAGTTCTTTCTTTATTTTTTTTGGAATGGGCTTGGAGGGAAGCTGTAAGGCTATAGCATCACTCATCGATAATTTTGAGTGTACATTTGGTAATTTTAGAATATCAAACTCCTAATTTTTTCTAAAAATTGTCAAATCAGGACACAAATCCCTCCTTAAATTTTGCAACGGATCATGTGTTGTATCTTGAACAGTATAATGGAATATGGTACAGAGTAATACACATATTTTCAAATAACTGATTACTGTTTATGGATAACTCATCAACATTATGCCAGAAATTGCACCCAAGGTGTTGCCTAGTGGTCAATGAAGTGAGAAGAGAACCATGAGGTCTCAAGTTCAAATCCTAGCGGAGATAAAAAGACTTGGGGGTTTCTTCCCATTTGCCTAAGCCTTTGAGGCAAAATTATCTGGTACCTATGCTGGTGGGAGATAACAGGTGCCCAATGGAATAATTAAGGCACAAGCAAGCAGGCTCGGACACCACGATTATTTTAAAAAGAAGTATGCTGGAAATTGCTTTTTTTGTTTTGCATGTGAATAATTTAGAGAACGCCACAGATGCACCAATATCTCCAGTACACATGTTACGTAGATACTCAACCAACTGCCATTCAACTTCAGACAAATTCCGATCTAAACACACAAACAAATGCAAATCAACAAAATCCAATCTATATATATACCCACGTACAAAAGGTAAACAAAACTTCATCTGGATATAATCTCTTCCCCAATAGACAACCCCCTGTTAGCTCCTTTCCTTTGTTACCTGACATTACATTCCATCTATCATAGATGATTTTTCTGTGTCATTCTCTCTTTATAGGTGATTTTCTTATACTTAGTTGCTATCTTTTTACTGGCCCTTCTCAAATTGCATCATTATTTGCTTAGTCTGACTCCCATAGGATGCCTGGAAATTCCTTGACTGATCCCCATGAAAGTGAAACACCTAAAAGTTCCCTAGATTCTTATTACTTTGACATTCTTATCTGAACCGTCCTGGTTCATCAACACTTTGATTTCATTTACTATTTTTACGCATAATCTCTGTTATAAAAGATTGACTCATTTGCCTTGTTGATCTTTGTTGGTTCTGTTTCAAGATATCACTTTTCTTCTTCATTGTTGGTCTCCTAGCATGAAAATTACTCTCCTCATCTCCTAGAATGTCCCTCTCCGAGATCATTTAGGTAGGTATCTGCTGCAATCTCGCATGTTGCGTTAATTCTCCAATATCAGATGTTTCCCCTGTCTGATTTACTTATTCTCTTTGTGCATCAAATACCATAATCCTCTTTCCCGAATGACAAGAATGGATATGTAGCATTAAAGGCTCATATCTAGCATATTAGAGCATAAGTATTGCATTTTGTAAGTTACTCTTATTCTCAGTTTGACTTGCTTTCATCTGCTCTCTCCATTTCAAATGTGGAGTACCGTTTGACTTGGTCGCTTATAAGAGAAAATACTAGATGCTTAATATCTGTCGAGGAAACATCTTGGACTGTGATATGATTAATGTATTTTTAAGGTGAAAATAGAAAAAGCAAACGTATTGAAAAGTGTTGAGTGGATCCACCAGAAACAAAGTTGTAGTATACATAATGAAAAAATTTAAAGAGAAATAGTTTGATAAATTACTATTTCAGATACAAAATTTTGCTGGAAGATTATGAGAGTATTGTATATTAATAGTGGTGGAACTTGTAAAAGGAACATTTAGTTGCTCCATCAATCACAATTTATATCGTATTTCATGTGTTCTCAAGGAGTAAGCTGTAAAAGGAGTAGATGTCCTGAATGATATTACAGGTTCATTCTGTAAAAATTAAATTTGGCGTTAGAATTGCAGAAAGTGAACACCATTGAAACGGCAATAAAAGTAGACTAATTATTTTTAGAATCACAATATCAGATGTTGATAAAATATTATAAACAACTTTTTGTTACTCCCTCCATATACTATATTACGTAGTAATGTTTGACTTGGTACAAAATTAAAATGTTTGTTTACAATTTGTGTTATATTAGATGTAGTGGAAGTAACTACTAAAAGAGTTTAAGAAGTTATTTTAGAGAGATAAAATTTAACTTGTTGAAAGTTGTATAGTATAATATTTTTAGTGTAATGGCTCAAACATTTTAGGACGTTGTGAAAGGGATGGTTGTCATAAAATTGGGACAAACTCCTTTGTTAATGGTATGTCAGGCAATTGCACTTGTAAATGGATGCAGTGCTAGTAGTAGTATATTAGCTCATCATCTGTTATGTGTAACTTGAAAATTTCTTTTCTCGTATATTTACGAGCTTGGATGCGCAAGATCTGAATCTACTCACACACTCAAACTAAATTACCCTCTGTTTTGCACCTTCAGTTATGCCTTGTCATTAGAATAATATTTACATGATGCAATCTTCATTCCACAAGTTTATAATCTAAACAGTTTTGGGAGACCTGTGCATTTGTTAATAGTGTTCCAAATTTGTAATTGTCTCAATTTTTATGTAGGGCTGATGTTGCAGTTGCTTTATTCTGCGCCTTGTTATTTGGTGTGCTTATATTATCATCATATGTGGCCCTTTATTTACGACATTACTGGAGTTCCTTTCTCATTATAAGCCTTGCCATTACCCTTCCAGTGCGTCTGAGAATGTTACGACAGGCTCATGCAAGAAAGAAAGTAAGACAGTTACCTTTGTCTATGTGAACTTCCTTCTACTTCTGGAAGCACCAAACAGTGGTTTAAGTGAAAGGAATACCTTTTGCACAAAAGTGCTCTCCAATTGTAGTAATACAGTTCTTTGATCTTCGTCACATAGGCTGACCAATCTTCTGCTGTGAAAGATGGGACACACCCTTCATATTACTCTTGATGACTCATTCATTAAGAAACAGGATTTAGACGATCAATTAGCTCCCTATGAAATGAACAACCAGAGCTCAAGGTTTCAGC</genome_strand>
        <mrna_strand>AATTTGTTTCTCTTAATAAAATAGCATACTGTATTAACAAAATCTTCTATCTTATTTCGTCTAACTGTGTACTGGGGTCATGCGAATCCCTCTCAGTTTAGCATTTTCTTCTTCGTTTTCCTTTTGCGTTGGACCAGTGTAACAGCTTATTCGGAGGGATCGTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGATGTTGCAGTTGCTTTATTCTGCGCCTTGTTATTTGGTGTGCTTATATTATCATCATATGTGGCCCTTTATTTACGACATTACTGGAGTTCCTTTCTCATTATAAGCCTTGCCATTACCCTTCCAGTGCGTCTGAGAATGTTACGACAGGCTCATGCAAGAAAGAAAGTAAGACAGTTACCTTTGTCTATGTGAACTTCCTTCTACTTCTGGAAGCACCAAACAGTGGTTTAAGTGAAAGGAATACCTTTTGCACAAAAGTGCTCTCCAATTGTAGTAATACAGTTCTTTGATCTTCGTCACATAGGCTGACCAATCTTCTGCTGTGAAAGATGGGACACACCCTTCATATTACTCTTGATGACTCATTCATTAAGAAACAGGATTTAGACGATCAATTAGCTTCCTATGAAATGAACAACCAGAGCTCAAGGTTTCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U596222" ref_strand="+" ref_description="SGN-U596222 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gtttcttcaattgctaatctaccaatacctaggtgtagttcgttgcttctgaatttgcaattggtattgaaggcaaaaattaattgagatcggagaatcaggttttcgatcgttttggttaacatgataacaaggtctaaactggttgagcagctcagagattatcagatccgatctcaacacaagtgccctcctcttactttcttttcaccaaagctttatctctccaactgaaattgcacccaaggtgttgcctagtggtcaatgaagtgagaagagaaccatgaggtctcaagttcaaatcctagcggagataaaaagacttgggggtttcttcccatttgcctaagcctttgaggcaaaattatctggtacctatgctggtgggagataacaggtgcccaatggaataattaaggcacaagcaagcaggctcggacaccacgattattttaaaaagaagtatgctggaaattgctttttttgttttgcatgtgaataatttagagaacgccacagatgcaccaatatctccagtacacatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="27617" stop="31748"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27917" g_stop="28149" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="233" r_length="233" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28150" i_stop="31135" i_length="2986">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.921" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31136" g_stop="31448" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="546" r_length="313" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U596222" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U596222" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27917" e_stop="28149"/>
          <exon e_start="31136" e_stop="31448"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTGGTACGTCTCCATATTTCTCTCTGTAAATGTATTTATCCCTGCACATAGTAATATCAAGTTTAACAAATTTAGCAGGGAGAAGTTTCTGTTTAGACTTTTATGCTTTTTTTTTTTTATTTAGTTCAATTTATTTGTGTATACCTGAGCTATTTGTACAAAAAAAAACTGATTTTGTGATATTTAATTGTTCGCATTACCTGCCACCAGCAGGAATTTTGGCATGTTTGTAGTCCGATGAGTAGAAATCACTGAGCTATTTTTGTTATTTAACCGTGGTTTTTACTTACTTCATTAACAACTAAGCTACACCTTGTGTGCATTATTTTGAATTTATGAATATGTGATTTGGTAAACTACTTCAGTTATAGATATTTAAGCAGTTCAACTAGAATGTCATAGTTCAATTTATACAAACGATGAATCTAAAGCGTCTGCTGAGGCGTAAAGCCAACCAGCTTTGAATTGCAAAGGCAAAGCGTCTGCTGAGGCATAAAGCCAACCAGCTTTGAATTGCAAAGGCAGTGGACATGGACTCACTAATTCCAAAAAAATTATGATCTGCAATGATTTTGGCTAGACTGAAAGCCACCTTGGGTACAAATTGCTAAGGCATTCTACAAAATAAGAATCTGATCTATCCTGATTTTTTTGATAATTGAGATAATCCTCATACCAATGATACATAATTTGAAACACAGTGAATAATGGGTTTGTTCTTTTATCATTCTCCACTTAATTATCAAGTTATTATTTTTGGCAAGGTTCGAACCTGTGACATATGTATAACCTACACCAGCATTACACTAACAACTAGATCAAAGCCCTAGGGGGCAATTCTCTCCAGATATTTCTCCATCTGTTGAAGTTATTAAAGAGTAACTTTTTGTCTTTCTTTTATCTTGCAATTATTTTATGGTGGAGGAGGAGTCTTGGGTCTTTACTAAGTTTATTGTGGCGACATTCTCTTCTGATGTGGTCACCCAAATTCTGATCACCTTCCTTAAAACTGTGCTACCTCTGCTCTTCCAATATCTTCTTGATTACCAAGTAGCATCTGCTGCTCAGATCCGTTTTCAACCATAAAGCTTGAATGTAGTTTACTGACTTATTCTCCTTTATGGATCTCTCCACGTGATGAGTTCCACCAATACGATTTCTCCCCATAAAGAGGAAATGATTTTTGCATGATCTGGTACTCAAGCTTCTGAATTCACCAAAATTTTTGTCAGTTCAATTTTAGTGGGTTAATCACCTGAAGTTCATGGAATAAATCTATCTTATAAATTAATCCTTGTTGTTTTCTGGTCCATATAATTCTGCTTGGTATATGGTAAAGGAATGTCGGTTTTTGGCCCAATATGTGAAACCTGTTAGTTTGTTGGGCATTGTTAAATTAGGTCTTAAGCCTAACTCACACCCCAAAAGCTAGTTCTAAGGGAGGAGAATCGCCCAGGCCTTATAAGGATTCACTTATCTTATTAACCGCAAATGTGGAACTTTTGTCATTCTTTATCACCCAACCTCATGCCCATGCTTAGCATTTGGTGCGTGGGCAATTTTGATTTTGGGGGTCCCAACATTTGGTGAGATGAGTCCTGCTCTGATACCACGTTAAAGTGTGTGACCATCTCATTTAAAAGCTTAAGTGGTTAGATTGAGCATACTTTTATTATTTAATTATATTCTTAACCGGCATCAATAGGAATGGTCGCACTTGTTCTAATTTGATTATTTGAACCTGTAAATGATTGTCAGTTTCCTTTCACACAGCTTTCTTTCATCCTTTCCCATTTGGTCACATCTCTTCCATCCATCTCAGAGATATTTGAACAGGCAAAGAGATACTCTTACACTGAAGAATGCTCCACCCATCTTCTCATTGATGTAGATCATCCCCGCGAATAATATTCTCTGCTAGTTCTGGTCACTGCTCTCCTTTCTTACCTTGCCAGAATCCTTTAAGTTGAACCTACTCTGAGGGAGTTGTTCTTAACGAGTGTTAATGATTTATCCAATACCCGTCCATCTTTCATCCTAGCCTTCTCAGTATCTCAATTCTTCAGAACTTTCCCCCTCTGTCAACTTAAGCCAAGTTGAAACACCTTTTTCATTTAAAGCTTGACCCATCAAAACCCCATCTCTCTCTGTAGTGTTTTATTGCCATAGTTATTTTTGCAAATTTACTAAGCTCTGGCTCCCGAACCAATAGAAACTCATTGTATTTCTTTCTACATATATTTCAAATATCCATTACTTCTACCGAGAGAAGAAACCTCATCCTTAAATACAGACCACCTTTCCTGGATAGGTCTTCCTCTCTATTTTCTGAGATTCCTCGAAGCCCTTGTTGCCTCTGAGTACCACTTCTTTGAAGCTTCCTTTTTTCTCACATATATCCATGCTATTAGTTGACCTATGCCTGTTTGAACAGCCTCGGTTAATTGTTACTGAAATGCCGTTTAGTTGGCTTATGTCTGTTTGAACAACCTCGGTTAATCTTACCTCTTTTTGTTCTCCCAATTGAGTAGAATTGAAATATCACCTCTCCTTTTTTCGTCTGTGAATGTCAATCACTGCACCTTCATCTTCTGATTGTCTAGAACTTTAGATTTCCTATAAGTATATCACTATAGCATCGTGTTCATGTTGGTTATTTAATGTAATTAAGCTTCCATGTCAAATACTTAATATTTTCGCCTTTCCATGTTTAGTTCTTTCTTTATTTTTTTTGGAATGGGCTTGGAGGGAAGCTGTAAGGCTATAGCATCACTCATCGATAATTTTGAGTGTACATTTGGTAATTTTAGAATATCAAACTCCTAATTTTTTCTAAAAATTGTCAAATCAGGACACAAATCCCTCCTTAAATTTTGCAACGGATCATGTGTTGTATCTTGAACAGTATAATGGAATATGGTACAGAGTAATACACATATTTTCAAATAACTGATTACTGTTTATGGATAACTCATCAACATTATGCCAGAAATTGCACCCAAGGTGTTGCCTAGTGGTCAATGAAGTGAGAAGAGAACCATGAGGTCTCAAGTTCAAATCCTAGCGGAGATAAAAAGACTTGGGGGTTTCTTCCCATTTGCCTAAGCCTTTGAGGCAAAATTATCTGGTACCTATGCTGGTGGGAGATAACAGGTGCCCAATGGAATAATTAAGGCACAAGCAAGCAGGCTCGGACACCACGATTATTTTAAAAAGAAGTATGCTGGAAATTGCTTTTTTTGTTTTGCATGTGAATAATTTAGAGAACGCCACAGATGCACCAATATCTCCAGTACACATGT</genome_strand>
        <mrna_strand>GTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTGCACCCAAGGTGTTGCCTAGTGGTCAATGAAGTGAGAAGAGAACCATGAGGTCTCAAGTTCAAATCCTAGCGGAGATAAAAAGACTTGGGGGTTTCTTCCCATTTGCCTAAGCCTTTGAGGCAAAATTATCTGGTACCTATGCTGGTGGGAGATAACAGGTGCCCAATGGAATAATTAAGGCACAAGCAAGCAGGCTCGGACACCACGATTATTTTAAAAAGAAGTATGCTGGAAATTGCTTTTTTTGTTTTGCATGTGAATAATTTAGAGAACGCCACAGATGCACCAATATCTCCAGTACACATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U567839" ref_strand="+" ref_description="SGN-U567839 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|119224824|dbj|BAF41219.1| (e_value=0) cytochrome; (*ATH) AT3G50660.1 (e_value=0) | Symbol: None | steroid 22-alpha-hydroxylase (CYP90B1) (DWF4), identical to gi:2935342 | chr3:18825122-18828214 REVERSE | Aliases: T3A5.40; (*SWP) sp|O64989|C90B1_ARATH (e_value=0) Cytochrome P450 90B1 OS=Arabidopsis thaliana GN=CYP90B1; ">
      <seq>gcttcagaaacagagcttattgagtgttgaaactgaaaaagaagaagaaagaaatagagaagaaggaataacatcaatgtctgacttagagttttttctttttcttattcctccaatcttagcagtacttataattcttaatctattcaaaagaaaacacaactttcaaaatcttccaccaggggatatgggttggccttttcttggtgaaactattggttatttgagaccttattcagctactactattggagatttcatgcaagatcatatttctaggtatgggaaaattttcaagtcaaatttgtttggagagccaacaatagtttcagcagatgcagggctaaacagatacattctgcagaatgaagggagattatttgagtgtaattatccaagaagtataggtgggatacttggtaaatggtctatgttagttcaagttggacaaatgcatagagatatgaggatgatttctctgaattttttgagcaatgctaggctaaggaatcaacttttaagtgaagttgaaaagcatactttgcttgttcttggctcttggaaacaggattctgttgtttgtgcacaagatgaagcaaagaagttaacattcaactttatggcagagcatatcatgagtctacaacctggaaatccagagacagagaagctgaaaaaagagtacatcacatttatgaaaggagtggtttctgctccattgaattttccaggaacagcttacagaaaggccttacagtctcgatcaacaattcttggatttattgagagaaaaatggaggagaggcttaaggaaatgaacagaaacgaaaacgaccttctaggttgggttctgaagaattcaaatctctcaaaagagcaaattcttgatttgctactgagtttgctctttgctggccatgaaacttcatcagtagcaatagctctgtctattttcttactcgaaagctgtcctgctgctgttcaacaattaacagaagagcacttggagatttcccgggcaaaaaaacagtcaggagaaacagaattaaattgggatgactacaagaaaatggaattcacccaatgtgttattaatgagactctaagacttgggaatgtagtgaggtttctgcacaggaaagctgtgaaagatgttcgatataaaggttatgatattccatgtggatggaaagtgttgccggtgatttcagcagcgcatttagatccttcacttttcgaccgacctcacgactttgatccttggagatggcagaacgcagaagagtcgccttcaggtaaaggaggaagcacaggcacaagcagcacaacaaaaagtagtaataatttcatgccatttgggggaggtccacgtctatgtgcaggatctgaactggccaaacttgagatggccattttcattcactatcttgttcttaattttcactggaaattagctgcaactgatcaggcttttgcctatccttacgtagattttcccaatgccctacctatcaatatccaacatcgatcgttaaataaattacatgactagccctaattcatcgtattagaatctacgttcgctcgcacatcgcatcgtctatgggtaaacattttattatattgtataaataaaaaatggtagctgaacaaatgggaaagaggatggtacttgaaatgattcaaaccaaaagagatgttttgtaaatctagctaattatctaggaggtgaagcagctgctacagtttttgttctctcttttttttttttgctttatctcttctcttgtttttttttttcttttttctttccgttacgtagtacataattttctatgtaattaaatacagcgaaattattcgattctccgtttttactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="46011" stop="51121"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46311" g_stop="46589" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="279" r_length="279" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46590" i_stop="46655" i_length="66">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46656" g_stop="46980" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="604" r_length="325" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46981" i_stop="47266" i_length="286">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="47267" g_stop="47419" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="757" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="47420" i_stop="47524" i_length="105">
            <donor d_prob="0.854" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="47525" g_stop="47761" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="758" r_stop="994" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="47762" i_stop="47847" i_length="86">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="47848" g_stop="47940" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="995" r_stop="1087" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="47941" i_stop="48111" i_length="171">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="48112" g_stop="48190" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1088" r_stop="1166" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="48191" i_stop="48301" i_length="111">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.919" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="48302" g_stop="48408" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1167" r_stop="1273" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="48409" i_stop="50215" i_length="1807">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="50216" g_stop="50821" g_length="606"/>
          <reference_exon_boundary r_type="cDNA" r_start="1274" r_stop="1880" r_length="607" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U567839" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1879</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567839" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46311" e_stop="46589"/>
          <exon e_start="46656" e_stop="46980"/>
          <exon e_start="47267" e_stop="47419"/>
          <exon e_start="47525" e_stop="47761"/>
          <exon e_start="47848" e_stop="47940"/>
          <exon e_start="48112" e_stop="48190"/>
          <exon e_start="48302" e_stop="48408"/>
          <exon e_start="50216" e_stop="50821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTCAGAAACAGAGCTTATTGAGTGTTGAAACTGAAAAAGAAGAAGAAAGAAATAGAGAAGAAGGAATAACATCAATGTCTGACTTAGAGTTTTTTCTTTTTCTTATTCCTCCAATCTTAGCAGTACTTATAATTCTTAATCTATTCAAAAGAAAACACAACTTTCAAAATCTTCCACCAGGGGATATGGGTTGGCCTTTTCTTGGTGAAACTATTGGTTATTTGAGACCTTATTCAGCTACTACTATTGGAGATTTCATGCAAGATCATATTTCTAGGTAAATCCCTTTTTTATTTGTGTGTTTGTTGAATTTTTGTACTGAAAAAATTGGATCTTTTTTCAGGTATGGGAAAATTTTCAAGTCAAATTTGTTTGGAGAGCCAACAATAGTTTCAGCAGATGCAGGGCTAAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTAGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGGCTAAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATACTTTGCTTGTTCTTGGCTCTTGGAAACAGGATTCTGTTGTTTGTGCACAAGATGAAGCAAAGAAGGTGAATAAGTGGCTTCGCACTATTTTGTTGTAGTTATTGATCGTATTTTTTCTTCTTTTTTCAATGTATTTTATCATGATTTTTGCACTTCCATAATTTCCTTAAGGTGAGTGTAAAACACTCTACCTTTCAAGGTAGGGTAAGGTTTACACGTTCAATGTACTCTTTCAGACCTCGTTCAATGTACTCTTTCAGACCTCATTTGTATGATTACACTGAGTATGTTATTATTGATGCTACTCTAACTTTGGAAATTGTTGTTGTTTTGTGTGTGAAATTTCTACAGTTAACATTCAACTTTATGGCAGAGCATATCATGAGTCTACAACCTGGAAATCCAGAGACAGAGAAGCTGAAAAAAGAGTACATCACATTTATGAAAGGAGTGGTTTCTGCTCCATTGAATTTTCCAGGAACAGCTTACAGAAAGGCCTTACAGGTACCATTATAAATCACTAGGACATGAACGTGCTTACCATCTGAACAACCCCTTTTACTTGTTCACTTATTTTCAAGTTACGAATTATTTTTCTCTTTTCAACAGTCTCGATCAACAATTCTTGGATTTATTGAGAGAAAAATGGAGGAGAGGCTTAAGGAAATGAACAGAAACGAAAACGACCTTCTAGGTTGGGTTCTGAAGAATTCAAATCTCTCAAAAGAGCAAATTCTTGATTTGCTACTGAGTTTGCTCTTTGCTGGCCATGAAACTTCATCAGTAGCAATAGCTCTGTCTATTTTCTTACTCGAAAGCTGTCCTGCTGCTGTTCAACAATTAACAGTAAGTTCAAATAATCAAACACTTTTATAGAATTTTCTTCTAGTCCACTCTTTAATATTTTTTCAACTTGTTGGTAATAAATTTAGGAAGAGCACTTGGAGATTTCCCGGGCAAAAAAACAGTCAGGAGAAACAGAATTAAATTGGGATGACTACAAGAAAATGGAATTCACCCAATGTGTAAGTTTATACTCTTTAGCTCTTATCAACTCATTTAAAAGATAACTGTTCGTACACAAAGTACAATTGTTTTGTTACATGTTACACACACATTAATAGTGTGAAAACTCTATATACATTGATAGTAACACATATGTAATGCTAAATTATTATTTTTTCCTTCACTTGCAGGTTATTAATGAGACTCTAAGACTTGGGAATGTAGTGAGGTTTCTGCACAGGAAAGCTGTGAAAGATGTTCGATATAAAGGTATTATTGTATGATGATGCATGGCTTCAGCTTTAAAATCTGATTTGTTTTTGCCTTTTTAACAATCTTTTTGTTATTGTTCTGTTTTTCAACTTGAAAACTCAAAAAAAGGTTATGATATTCCATGTGGATGGAAAGTGTTGCCGGTGATTTCAGCAGCGCATTTAGATCCTTCACTTTTCGACCGACCTCACGACTTTGATCCTTGGAGATGGCAGGTTAGTCAATTTGTGCATTTAAACCGACACTCAATTTAGTGTACAAAGCATCCCACGTTATTAAGGTCTTTAACTCAACTACTCTAGTGTGTGATGTATATCCAAATACAAGTATTGGTAAAAGCTTTCACGATTCAAAGTCGTAATCTATAAATCACACAAAGATAATTTTATTATTGTTCCAAGAGTTCATCCAATTTTAAAAATCTTTCATAGATAAATGTAAGTAGTAAACTAAACCTTGCAACTTTATGAGAAGAGCTAAAGGAAAGTTAAATTTGAAAGCAAAAAGTAGTTTTTAATGCATCCACCAATTTTAGTCGTCTTACGTCGTGGGATCATGTGATGAAAAATTGAAAGGAACGCACACCTCTAATTTTAAGAACCAAATATGTGCTTCAGCTTTAAGATTGGAATGTACTTATTAAGCTACGTTACGGGGATAATATTTTCCCAAAAGAGAAAACAATAATTTAATGGATAAGGGAGTGAATTAAGACTAGGTTGGGGAGAGTGGAAAAGAACATTCTATGTAGGCCGTTTGTTGAGTCGCATGATAGAACATATAAAATATCATCAATTAAAAGCAAGGTGGGATTTAGCCATCTTGGTAATCATAATAATCCATAGAAATGAACTGTCACAATCAATTCATGCACATATGCTGCTGCATTATGCACGAAGTAAAACCACACCTTAAGCTTAAAGATGTGAATTGGGTGCAAATAATATAAGCAAGGAATAAATATGGTGGGACGGACGAAATTCTCTTTTCTTTAGTTAGAGATTTTGAGTTCAAGTGTTCAGTTGGAATAGATGTGAAGAGTAATTAGTGTTCGGTTCATAGGAATGATCATTTTCAAACCTTGTGTATGTAATTAATATAATAAGTATAAACATTTGATTTAAAACTCATATCAATTGAGTCAGTAGTAAAATCCTTTAATTGAACCAATAAAGCTCACTCTTGAATTCTCCTATGGTTCTAGGACAATGACTTTAATACGTATATATTGGATGACTTCTTATTTTAGTTATTTTCTTGAGAAAAAAAATTGTCTCCATTTGAAGCAATCATTATAATAGCACTCTTTGAAATGCAATCTTTATGTTAATGTAATATGCTTTTTAGATTGAATTATCTTCTCTCTTTTTTTCGTATTTATCTTCTATCTATATAATATATTCCAACCAAAAACTAGTCCAAAGTCCTAATAGGGGAGGACCCAATCAAGGTAATTACACAATTAAAAGACTTGTCCAAACCCAACCCGCATGTGGGTGGTGGGGTTTTCATGTGCACGTGCACCTGTGCTTTTCATGGTGGCTCACCTCCACTCTACTCCATGCTGGTCCATCCATTTCCCATTCTATCCTCTGTCTTGGGGCCACAATTACATGTTATTTTAATTCCTATTTGTCAAAAATATTCAAAGTGCATTTACTGCTTTCAGCACCACTACTTGTTCCTCAATGCAGATACTCACTTATGCAATTTTCATTTTCTTCTGAAATCTAAACTTAATTATCGAATGGGAAGTACTGTACCGCACAGTGTGAAATGCATTGATAATGTCGGCAATATAGTTGAGAGGAACAAATGATACTTTATGTTTTACCATTTAAAGGGTATGAAGGATGTCAAAAAAAAGTATTTTTGTCATTTTCATTGCTTTATTCCAAATAACAAAATCTCGAGCAACTTATTGGGTACTAATAGTTAATTGAATTTGTTGTCTTTGGTTCATCGTACCAAAATGACACCTTAGATTTAAATTTAAAAGTGATGAGTAGTGTATTAATGCAGAACGCAGAAGAGTCGCCTTCAGGTAAAGGAGGAAGCACAGGCACAAGCAGCACAACAAAAAGTAGTAATAATTTCATGCCATTTGGGGGAGGTCCACGTCTATGTGCAGGATCTGAACTGGCCAAACTTGAGATGGCCATTTTCATTCACTATCTTGTTCTTAATTTTCACTGGAAATTAGCTGCAACTGATCAGGCTTTTGCCTATCCTTACGTAGATTTTCCCAATGCCCTACCTATCAATATCCAACATCGATCGTTAAATAAATTACATGACTAGCCCTAATTCATCGTATTAGAATCTACGTTCGCTCGCACATCGCATCGTCTATGGGTAAACATTTTATTATATTGTATAAATAAAAAATGGTAGCTGAACAAATGGGAAAGAGGATGGTACTTGAAATGATTCAAACCAAAAGAGATGTTTTGTAAATCTAGCTAATTATCTAGGAGGTGAAGCAGCTGCTACAGTTTTTGTTCTCTCTTTTTTTTTTTTGCTTTATCTCTTCTCTTG-TTTTTTTTTTCTTTTTTCTTTCCGTTACGTAGTACATAATTTTCTATGTAATTAAATACAGCGAAATTATTCGATTCTCCGTTTTTACTT</genome_strand>
        <mrna_strand>GCTTCAGAAACAGAGCTTATTGAGTGTTGAAACTGAAAAAGAAGAAGAAAGAAATAGAGAAGAAGGAATAACATCAATGTCTGACTTAGAGTTTTTTCTTTTTCTTATTCCTCCAATCTTAGCAGTACTTATAATTCTTAATCTATTCAAAAGAAAACACAACTTTCAAAATCTTCCACCAGGGGATATGGGTTGGCCTTTTCTTGGTGAAACTATTGGTTATTTGAGACCTTATTCAGCTACTACTATTGGAGATTTCATGCAAGATCATATTTCTAG..................................................................GTATGGGAAAATTTTCAAGTCAAATTTGTTTGGAGAGCCAACAATAGTTTCAGCAGATGCAGGGCTAAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTAGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGGCTAAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATACTTTGCTTGTTCTTGGCTCTTGGAAACAGGATTCTGTTGTTTGTGCACAAGATGAAGCAAAGAAG..............................................................................................................................................................................................................................................................................................TTAACATTCAACTTTATGGCAGAGCATATCATGAGTCTACAACCTGGAAATCCAGAGACAGAGAAGCTGAAAAAAGAGTACATCACATTTATGAAAGGAGTGGTTTCTGCTCCATTGAATTTTCCAGGAACAGCTTACAGAAAGGCCTTACAG.........................................................................................................TCTCGATCAACAATTCTTGGATTTATTGAGAGAAAAATGGAGGAGAGGCTTAAGGAAATGAACAGAAACGAAAACGACCTTCTAGGTTGGGTTCTGAAGAATTCAAATCTCTCAAAAGAGCAAATTCTTGATTTGCTACTGAGTTTGCTCTTTGCTGGCCATGAAACTTCATCAGTAGCAATAGCTCTGTCTATTTTCTTACTCGAAAGCTGTCCTGCTGCTGTTCAACAATTAACA......................................................................................GAAGAGCACTTGGAGATTTCCCGGGCAAAAAAACAGTCAGGAGAAACAGAATTAAATTGGGATGACTACAAGAAAATGGAATTCACCCAATGT...........................................................................................................................................................................GTTATTAATGAGACTCTAAGACTTGGGAATGTAGTGAGGTTTCTGCACAGGAAAGCTGTGAAAGATGTTCGATATAAAG...............................................................................................................GTTATGATATTCCATGTGGATGGAAAGTGTTGCCGGTGATTTCAGCAGCGCATTTAGATCCTTCACTTTTCGACCGACCTCACGACTTTGATCCTTGGAGATGGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAGAAGAGTCGCCTTCAGGTAAAGGAGGAAGCACAGGCACAAGCAGCACAACAAAAAGTAGTAATAATTTCATGCCATTTGGGGGAGGTCCACGTCTATGTGCAGGATCTGAACTGGCCAAACTTGAGATGGCCATTTTCATTCACTATCTTGTTCTTAATTTTCACTGGAAATTAGCTGCAACTGATCAGGCTTTTGCCTATCCTTACGTAGATTTTCCCAATGCCCTACCTATCAATATCCAACATCGATCGTTAAATAAATTACATGACTAGCCCTAATTCATCGTATTAGAATCTACGTTCGCTCGCACATCGCATCGTCTATGGGTAAACATTTTATTATATTGTATAAATAAAAAATGGTAGCTGAACAAATGGGAAAGAGGATGGTACTTGAAATGATTCAAACCAAAAGAGATGTTTTGTAAATCTAGCTAATTATCTAGGAGGTGAAGCAGCTGCTACAGTTTTTGTTCTCTCTTTTTTTTTTTTGCTTTATCTCTTCTCTTGTTTTTTTTTTTCTTTTTTCTTTCCGTTACGTAGTACATAATTTTCTATGTAATTAAATACAGCGAAATTATTCGATTCTCCGTTTTTACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U580353" ref_strand="+" ref_description="SGN-U580353 Tomato 200607#2 [33 ESTs aligned] (*GB) gi|15240075|ref|NP_201477.1| (e_value=0) succinate dehydrogenase [ubiquinone], putative [Arabidopsis thaliana]; (*ATH) AT5G66760.1 (e_value=0)  Symbol: None | succinate dehydrogenase (ubiquinone) flavoprotein subunit, mitochondrial / flavoprotein subunit of complex II, identical to SP:O82663 Succinate dehydrogenase (ubiquinone) flavoprotein subunit, mitochondrial (EC 1.3.5.1) (FP) (Flavopro... ; (*SWP) sp|O82663|DHSA1_ARATH (e_value=0) Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana GN=SDH1-1; ">
      <seq>gtttcntttagaattttaaaagaatgatatttcatattttcttgcgaaaaaacttttttttaggatttcattatattcaggtttggaatatctcaaaattaatatttttaaaataaaatttacacgttaaacgtaatactattattttaggtctacataaacataaattaattttgcgattaaattacgggtttgtcgtacagagcgtgacgtggccgtttagtaatattggttaacattangggtagttccagtaaagtgggaacataatcgtcagtcgccttatactttgtcccggtacccaaaaaaagagcatcccactttcacatccatttgattgctctacattgtattctgtacttcttcatctataactccattcaatctccgaacagaatccgcaccggcatattggtttccgatacgtttcagaatgtggcgctgtgtgtcgcgtggtcttcgcgcttcctccaacagatctatctccggcggcggccattttcgccgactcttctcctcacaaactaatgtgggaggctcgtcctacacggtagtcgatcacacatatgatgcggtggtggttggtgcaggcggtgctgggcttcgtgcagcaatagggttgtctgagcatggattcaatactgcttgcataaccaagctctttcctactcgatctcacactgttgcagctcagggtggtataaatgctgcattaggcaacatgacagaagacgattggaggtggcacatgtatgatacagtcaaaggaagtgattggttaggtgatcaggatgctatccaatacatgtgtagagaagctccaaaagcagttatagagcttgagaattatggtttgcctttctctcgaacagaagatggtaaaatatatcaacgtgcatttggtggtcaaagcctggactttgggaaaggaggacaagcatatcgttgtgcatgcgctgcagatcggactgggcatgctctattgcatactctttatggccaggccatgaagcataatacacagttttttgtggaatatttcgctttggatttactaatgaacagtgatgggagctgccaaggtgtaatagcactaaatatggaggatggtaccttgcatcgattccgtgctgccaatacaattttggccaccgggggttatggccgagcttacttctcggcaacatctgctcatacttgcactggagatggtaatgctatggttgcgcgtgctgggcttcctcttcaggatcttgagtttgtgcaatttcatccaactggtatatatggggctggttgcctcattactgaaggatctcgcggtgaaggtggtatcctgaggaatagtgagggtgagcgatttatggaaaggtatgccccaactgccaaggatcttgcctcaagagatgttgtttccagatctatgactatggaaattcgagaagggcgtggtgtaggacctttgaaggaccatatctatcttcacctcaatcacttacctccagaggttcttaaggagagacttccgggtatctctgaaacagctgccattttcgctggtgttgatgtaactaaggaaccaattcctgttttacctaccgtgcattataatatgggaggaatcccaactaattaccatggacaggtggtcactaaaaacggggatgatccagatgctgtgatccctggactgatggctgctggtgaagcagcatgcgcatctgttcatggtgccaatcgtcttggtgcaaattctcttctagatattgttgtttttggacgggcatgtgctaatagggttgcagagatccaaaaaccaggcgcggaacaaaagccacttgaaaaagatgctggggagaggaccattgcatggttggacaagattaggaactcaaatggttcattgcccacctcaaagataaggctggacatgcaaagagttatgcaaaacaatgctgctgtcttccgcacacaagagacattagaggaaggttgccagctcattgacaaaacatgggagagtttccatgatgttcagttgaaggacagaggtttaatatggaacacagatcttatagagactattgagttggaaaatcttttaattaatgcatgcatcaccatgcactcagccgaggcaagaaaagaaagcagaggagctcatgctcgtgaagattttacgaaaagagatgatgagaagtggatgaaacacaccataggatattgggaggacgagaaagttcggctagaatacagaccagtgcatatgaacactctagatgacgaagtcgagtcgttcccaccaaaggctcgtgtctactgatatactcatttatagggggatttggatggcgtagaagttgataataaggaaggttgcaataaatcgcgaaaattgtgaaattttggtaataactgtttgatttatttgtgcgatgaattgtaagcagcctgtgaagtgttcataaatattagaagcagaacaccgtttgtcttgtaatcaggaagcaaggcttcctgacttttcgatcttgtagaagatgatggaatcacttgtttatgctcttatatactctacttcttgcattttgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="56123" stop="63821"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56423" g_stop="56949" g_length="527"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56950" i_stop="57388" i_length="439">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57389" g_stop="57556" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="694" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57557" i_stop="58094" i_length="538">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="58095" g_stop="58182" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="695" r_stop="782" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="58183" i_stop="58538" i_length="356">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="58539" g_stop="58685" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="783" r_stop="929" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="58686" i_stop="58873" i_length="188">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="58874" g_stop="59014" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="930" r_stop="1070" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="59015" i_stop="59309" i_length="295">
            <donor d_prob="0.500" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59310" g_stop="59395" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1071" r_stop="1156" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="59396" i_stop="59484" i_length="89">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="59485" g_stop="59577" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1157" r_stop="1249" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="59578" i_stop="59672" i_length="95">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="59673" g_stop="59736" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1250" r_stop="1313" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="59737" i_stop="59939" i_length="203">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="59940" g_stop="60083" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1314" r_stop="1457" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="60084" i_stop="60841" i_length="758">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="60842" g_stop="61029" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1458" r_stop="1645" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="61030" i_stop="61143" i_length="114">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="61144" g_stop="61318" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="1646" r_stop="1820" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="61319" i_stop="61391" i_length="73">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="61392" g_stop="61562" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1821" r_stop="1991" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="61563" i_stop="61720" i_length="158">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="61721" g_stop="61790" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1992" r_stop="2061" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="61791" i_stop="61884" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="61885" g_stop="62005" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="2062" r_stop="2182" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="62006" i_stop="62093" i_length="88">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="62094" g_stop="62131" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="2183" r_stop="2220" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="62132" i_stop="63148" i_length="1017">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="63149" g_stop="63521" g_length="373"/>
          <reference_exon_boundary r_type="cDNA" r_start="2221" r_stop="2593" r_length="373" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U580353" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2594</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U580353" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56423" e_stop="56949"/>
          <exon e_start="57389" e_stop="57556"/>
          <exon e_start="58095" e_stop="58182"/>
          <exon e_start="58539" e_stop="58685"/>
          <exon e_start="58874" e_stop="59014"/>
          <exon e_start="59310" e_stop="59395"/>
          <exon e_start="59485" e_stop="59577"/>
          <exon e_start="59673" e_stop="59736"/>
          <exon e_start="59940" e_stop="60083"/>
          <exon e_start="60842" e_stop="61029"/>
          <exon e_start="61144" e_stop="61318"/>
          <exon e_start="61392" e_stop="61562"/>
          <exon e_start="61721" e_stop="61790"/>
          <exon e_start="61885" e_stop="62005"/>
          <exon e_start="62094" e_stop="62131"/>
          <exon e_start="63149" e_stop="63521"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCATTTAGAATTTTAAAAGAATGATATTTCATATTTTCTTGCGAAAAAACTTTTTTTTAGGATTTCATTATATTCAGGTTTGGAATATCTCAAAATTAATATTTTTAAAATAAAATTTACACGTTAAACGTAATACTATTATTTTAGGTCTACATAAACATAAATTAATTTTGCGATTAAATTACGGGTTTGTCGTACAGAGCGTGACGGTGGCCGTTTAGTAATATTGGTTAACATTAGGGGTAGTTCCAGTAAAGTGGGAACATAATCGTCAGTCGCCTTATACTTTGTCCCGGTACCCAAAAAAAGAGCATCCCACTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACTGTACGGTCCCTCTCTCTTTTTCTCAGTCTATTTATTCGATCAACTAATTATAAGCACCCGATTCTATCGTTTTATTGAATCTTATTGATTTTCGATTGATACATTTTGTATTGAAGCGTGTTCTAATCATTGTTGGTGACCTAGCTGTTGGCGAATCTTAGGATCTTTGGTTGATTGAGTTTTAGTTTTGACATCGCATCAGGTTAACGACCTAGATGTTATTGCATTTGATCTTCTGTTTTGAAGGACTTTGTGTGCGATTGTTCTAGAATCTCCGAGCTTTTAAGATTTCTCAATTTAGCCTTAAAGCTCTTTTTTATTATCATTTTTACTATTTTTTACTTTTATAAGCTGAGGTTTCACTTTTCTATTTCATAATTATATATATAAGATTCTGATGATAATTTTTCATTGTTGAATACTGTGTGCTGCCTAGCAGAATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAGGTACCTGGATTCTAACTCTGCCAATTTTTATTTATATTTATTTTCTTGGACTAGGCATTATTGTTGTATCATTGTATGGTAGGGAGGAGAAGACTCCAAATTTTAGAAGGAAATATTGTTGCACAAAGAACATCGAATAATATACTCTAATTGGGACTCTTTGCTCCTTGTTGTCGGGTTGCATGTTTATTTGGTGGGCTGGGCCAACTAGACAATACTCATTTTTACGCTGCATTTTCTTGGAGATGAATAGAAACTTGAACAAGGTTCACTGGATTTACTTTTAAAAAATTAAACTCATGACAGTGGCAGTTGAGATAGATTTGTGTTTTAGTTCGTACAGAATGCTATCTGCTAGTAAGTGAGAGATTACTTAAATATTATTGTTCTTGCTTGTGTCAATCTTGCTAACTTAGAGAAATTGGATAGAAAGCTGGTTTGCTCTGCAGTTTGATGGGTCTGGATTTGAAGATTGATTGACTAGAATAGGATTTTACATGTAATTGCTTAAGTTTTGGTTTGTGATTTTCCTTTGTAGGGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAGGTAAGGTTTATCTTGAAGTCAGATTTTCTCTATGTCTGTTGGCATTAACTCAATGCTTCTTTTGTATGAATAAACCACGTGAAGCTCAAAAGTATAGATTAGAAATATGCAGCTTGACAGTTACAGTTTTATCTCTTACTTGGACCTGTTGTACTTCAAAATAGAACCAATTGCTTTCAATGGGCCAAAGTTACACGGTTTTAACCACTTTGATGTATAAACTCTATGACCTGTTTTACATTTTTGGCAAAACCAATAATTTTGTTTTGGAGAAAGGTATGAACTGGCCAACTTTTGGACCTTTGATATTATGGCTTGGGTTTTTCTTTGTCTCAATGCAAGTGTGTTGATTCCAGGTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAGGTAAGAAGTTGAGCACTTGATCTAGTTGTATTATTTCCTGGGTGCCAAGTCGCATTTGTTAGGGAGCGCTTTACCCTCTGATATGGGACTTTTTGCGCGAATCCAGATTTAGTCGGACTCCAATCTGGGTATCCAGGAAACCAAAGAAAAAAAAATTCTCAATCTGACTCTTGTTTTCTCTTGGACAGGAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATGGTATTGTCTTCTACTTAGAAACTCAGTTTTATGTCATATGATTAAATATTAGCCTAGTTTGATATTACTTGACTTGCACTGTATACTTTGAAACTTTGTGGTAGTAATCTAGCATGTCATACTAAAAATTATCCTGTATTTCTTTTGATTTTTTAACATTTTTCTGATATGAATATTTATCAGTATACATGTGGTTGAAGTTATATGGAGATTCATTGGACCTCTTGCTCATTTTTAGCTGTTTCATTCTACTAATCAACTCTTCTCTGTGCTTTAAATAATGTGTCGACATCAGGGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGGGTACTTACTGGTTAACATTGACCTCTACTTAGACCTCTTGAAGTAGTAATGAATTTGTAAGCGTTCTCTTTTATAAATGTTTGGATTAGGGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAGGTCATTCTATAATGACATCTTCTGACCATGTCAATTCCCCCTCCCCCCTTCTATGGTACGTTATTTTAAATAAACTCTGCTATGTCTCTTTGCAGGATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAGGTTTGTTTCTTCTTCAATGCTATTAGTGATGGTTATAATTATATTGATTGTCCATTCTTCTGTCAATTGTTCTTCCATTCGTGTTTCCTGATGTACAGTGTTTTTCTTTCCTTTTTGAGAGTGATTTCTTGAGTATAGTATTTAACTTTTCTGTTGACATTCTTGAATTTCTATTTGTAACAAGTGCCTCATTCCATGCTTAGGATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACGGTCAGTTTCAATTTCTTATGAATCAGATAGTAGTGCTCTTTTTTTTCTTGTTTGTTCCTAATGGTTTGAACTTTTGATGGTTTTGCAGAAAAGAGATGATGAGAAGTGGATGAAACACACCATAGGGTAAGTGTTTTCCTTGTTTATTTTGATGGCTTACTTCTAGTCATCTTTCCTTAGTCTCTGCAATTGATGAAAGGTTTGCTTGATCATCCATTAAATCACCTTTCCATGAACATATCTTGTTGGGAGGGAGGGAAAGCGGAGGAGTATTGCAACCATTTTTGAGAATCTGTACCTAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAGTAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTTTCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTCTCTACATGTCCGAACAATCTCTAATCCTTCCTTCCTGCATCTTTTCTCTCGTAGTGTATCCATACATCCATCATCTCGTGAAATTGATGTAATACTTCAAAAAATTATTTTTTTTTTGTTAAAATAGTATTATCCTTCAAAAATTATTATCCATCGGAATGTGTTCCTGTGGTAGTGACTTAATTGTTCTCCAGTGCTCTTACCATGATTGATGCGCTCTACCGATTAAAGAAATCATGGTAGATGTACCCTACCAAGTGTTCAGCTTAACAAAGTTCATATATCTGCAGATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAAGGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTATATACTCTACTTCTTGCATTTTGAC</genome_strand>
        <mrna_strand>GTTTCNTTTAGAATTTTAAAAGAATGATATTTCATATTTTCTTGCGAAAAAACTTTTTTTTAGGATTTCATTATATTCAGGTTTGGAATATCTCAAAATTAATATTTTTAAAATAAAATTTACACGTTAAACGTAATACTATTATTTTAGGTCTACATAAACATAAATTAATTTTGCGATTAAATTACGGGTTTGTCGTACAGAGCGTGAC-GTGGCCGTTTAGTAATATTGGTTAACATTANGGGTAGTTCCAGTAAAGTGGGAACATAATCGTCAGTCGCCTTATACTTTGTCCCGGTACCCAAAAAAAGAGCATCCCACTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG....................................................................................................................................................................................................................................................................................................................................................................GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAG............................................................................................................................................................................................GAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG.......................................................................................................................................................................................................................................................................................................GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG.........................................................................................GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAG...............................................................................................GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAG...........................................................................................................................................................................................................GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG..................................................................................................................GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG.........................................................................GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG..............................................................................................................................................................GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG........................................................................................AAAAGAGATGATGAGAAGTGGATGAAACACACCATAGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAAGGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTATATACTCTACTTCTTGCATTTTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U592750" ref_strand="+" ref_description="SGN-U592750 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|115470493|ref|NP_001058845.1| (e_value=2e-136) Os07g0134800; (*ATH) AT5G66760.1 (e_value=6e-138)  Symbol: None | succinate dehydrogenase (ubiquinone) flavoprotein subunit, mitochondrial / flavoprotein subunit of complex II, identical to SP:O82663 Succinate dehydrogenase (ubiquinone) flavoprotein subunit, mitochondrial (EC 1.3.5.1) (FP) (Flavopro... ; (*SWP) sp|Q6ZDY8|DHSA_ORYSJ (e_value=1e-137) Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Oryza sativa subsp. japonica GN=SDH1; ">
      <seq>gtataaatgctgcattaggcaacatgacagaagacgattggaggtggcacatgtatgatacagtcaaaggaagtgattggttaggtgatcaggatgctatccaatacatgtgtagagaagctccaaaagcagttatagagcttgagaattatggtttgcctttctctcgaacagaagatggtaaaatatatcaacgtgcatttggtggtcaaagcctggactttgggaaaggaggacaagcatatcgttgtgcatgcgctgcagatcggactgggcatgctctattgcatactctttatggccaggccatgaagcataatacacagttttttgtggaatatttcgctttggatttactaatgaacagtgatgggagctgccaaggtgtaatagcactaaatatggaggatggtaccttgcatcgattccgtgctgccaatacaattttggccaccgggggttatggccgagcttacttctcggcaacatctgctcatacttgcactggagatggtaatgctatggttgcgcgtgctgggcttcctcttcaggatcttgagtttgtgcaatttcatccaactggtatatatggggctggttgcctcattactgaaggatctcgcggtgaaggtggtatcctgaggaatagtgagggtgagcgatttatggaaaggtatgccccaactgccaaggatcttgcctcaagagatgttgtttccatgatgttcagttgaaggacagaggtttaatatggaacacagatcttatagagactattgagttggaaaatcttttattaatgcatgcatcaccatgcactcagccgaggcaagaaaagaaagcagaggagctcatgctcgtgaagattttaccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="57799" stop="62304"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58099" g_stop="58182" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58183" i_stop="58538" i_length="356">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58539" g_stop="58685" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="231" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58686" i_stop="58873" i_length="188">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="58874" g_stop="59014" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="372" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="59015" i_stop="59309" i_length="295">
            <donor d_prob="0.500" d_score="1.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59310" g_stop="59395" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="458" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="59396" i_stop="59484" i_length="89">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="59485" g_stop="59577" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="551" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="59578" i_stop="59672" i_length="95">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="59673" g_stop="59736" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="552" r_stop="615" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="59737" i_stop="59939" i_length="203">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="59940" g_stop="60037" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="616" r_stop="713" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="60038" i_stop="61750" i_length="1713">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="61751" g_stop="61790" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="714" r_stop="753" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="61791" i_stop="61884" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="61885" g_stop="62005" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="754" r_stop="873" r_length="120" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U592750" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>874</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U592750" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58099" e_stop="58182"/>
          <exon e_start="58539" e_stop="58685"/>
          <exon e_start="58874" e_stop="59014"/>
          <exon e_start="59310" e_stop="59395"/>
          <exon e_start="59485" e_stop="59577"/>
          <exon e_start="59673" e_stop="59736"/>
          <exon e_start="59940" e_stop="60037"/>
          <exon e_start="61751" e_stop="61790"/>
          <exon e_start="61885" e_stop="62005"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAGGTAAGGTTTATCTTGAAGTCAGATTTTCTCTATGTCTGTTGGCATTAACTCAATGCTTCTTTTGTATGAATAAACCACGTGAAGCTCAAAAGTATAGATTAGAAATATGCAGCTTGACAGTTACAGTTTTATCTCTTACTTGGACCTGTTGTACTTCAAAATAGAACCAATTGCTTTCAATGGGCCAAAGTTACACGGTTTTAACCACTTTGATGTATAAACTCTATGACCTGTTTTACATTTTTGGCAAAACCAATAATTTTGTTTTGGAGAAAGGTATGAACTGGCCAACTTTTGGACCTTTGATATTATGGCTTGGGTTTTTCTTTGTCTCAATGCAAGTGTGTTGATTCCAGGTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAGGTAAGAAGTTGAGCACTTGATCTAGTTGTATTATTTCCTGGGTGCCAAGTCGCATTTGTTAGGGAGCGCTTTACCCTCTGATATGGGACTTTTTGCGCGAATCCAGATTTAGTCGGACTCCAATCTGGGTATCCAGGAAACCAAAGAAAAAAAAATTCTCAATCTGACTCTTGTTTTCTCTTGGACAGGAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATGGTATTGTCTTCTACTTAGAAACTCAGTTTTATGTCATATGATTAAATATTAGCCTAGTTTGATATTACTTGACTTGCACTGTATACTTTGAAACTTTGTGGTAGTAATCTAGCATGTCATACTAAAAATTATCCTGTATTTCTTTTGATTTTTTAACATTTTTCTGATATGAATATTTATCAGTATACATGTGGTTGAAGTTATATGGAGATTCATTGGACCTCTTGCTCATTTTTAGCTGTTTCATTCTACTAATCAACTCTTCTCTGTGCTTTAAATAATGTGTCGACATCAGGGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGGGTACTTACTGGTTAACATTGACCTCTACTTAGACCTCTTGAAGTAGTAATGAATTTGTAAGCGTTCTCTTTTATAAATGTTTGGATTAGGGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAGGTCATTCTATAATGACATCTTCTGACCATGTCAATTCCCCCTCCCCCCTTCTATGGTACGTTATTTTAAATAAACTCTGCTATGTCTCTTTGCAGGATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAGGTTTGTTTCTTCTTCAATGCTATTAGTGATGGTTATAATTATATTGATTGTCCATTCTTCTGTCAATTGTTCTTCCATTCGTGTTTCCTGATGTACAGTGTTTTTCTTTCCTTTTTGAGAGTGATTTCTTGAGTATAGTATTTAACTTTTCTGTTGACATTCTTGAATTTCTATTTGTAACAAGTGCCTCATTCCATGCTTAGGATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAGGTATGATGTCATTAATTTAGCCGAATTAAGAAGTTTATTCTTTTAGCACTCTTGTAAGAGCCCTTGTCTTAAGCTTAAGTCATTGTGGTCTGTGGTGGAGTAAGATTCTATAGGCTTAAAATGCACTGGATGGATATCGACCGCGAAGTTTATGATCTGTCTGTTTAAAGTCATCATGTTACGATGACCATAGTGAAAGTCTGAAATGCGAGACCTTTATCTAATTGGATGTATTATATTCAATTCATCTCTAGCTTCTGTCTGACTTAGACGTCATTGTTATTTTTATTTGTTTAGAGCATAATTATATAGGCATGCATGAGTATACTAACGTGAGTGCTCCTCCAATTTAGAAGCTTGTAAACTTTATCTCTAGACAATATGTTTGATGGTAAGCCACCTAAATCGTAAGGTAATTTTGCTATAAAGTCAACTGCATTTGTAATACAGCAACAATCTCAATTAAATAAATAGCAAATGTTTCAACTCTGCATTGAGATATACTAGTTCATGAGAACTACTCATCGACCAATTTCAATTATTAGTGACAAGTGAAGCTTGTTTGTTGTGAAAACTTTAAGTATCATAACTTCATAAGTGTGTGTGTGTGAGACTGCAAATGACAGTACTTATTCTGAGTATTTTGGATGTTTGTGGCACATGTGTTCAGGATGAACTCCTGCCCTGTTTCCTCCCCTTTTTCTTCCTCCTCTAAAGCAGTTTTCAAACGTCTGATATTATTGTCAAACTTTTGGTAGGACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAGGTATGAAAAATTAGTTAACGTCTCCCTCTCTGAAAATCTATTTTTCAACTTTTGTTTTTCTTACCTGCTCCATTTTTGAGTCTGAACTCATTTTTTGTATGTTTTGTTTGGAAGGTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAGGTTAGAGAATTTGTTTATATAATTTTTAGGCATGCATAACATGTTTAAGATTTCTGAACTTTCATATCTCCAGGCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAGGTAGGAAGAGGAGGTGTTTTCATATTTTTAAAGTTTATCTATATCATTTTTATTTTTTTTTGCAATAAGTGTCTTGGGAAGGTTTTATTTTTTATTTTCTTTTAAATATTCGGAGACTTTATCAGCTGAGCTGACTATTTTCTCTGTTGCGGTTACAGGTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATGGTATTATGGAGGAGATTATGAATCGTTATTAAATATTAGGTCTTCCTTTTCGTCTTGTTGTGTTCCTGAATTTCCTTCTATTTCAAATTCATAGGAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG</genome_strand>
        <mrna_strand>GTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG....................................................................................................................................................................................................................................................................................................................................................................GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAG............................................................................................................................................................................................GAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG.......................................................................................................................................................................................................................................................................................................GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG.........................................................................................GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAG...............................................................................................GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAG...........................................................................................................................................................................................................GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG..............................................................................................GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTT-ATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U570387" ref_strand="+" ref_description="SGN-U570387 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>tgagaatctgtacctagtgtgatctcacaagtggaatttggaaaggtggggtgtatgcagaccttacgccgaccttgttgaggtagaaaagtagtttctgacagatcctcggctcaagaaaagcatgatctaaaactgatctgacaaatactaaaataaaagctatagtgaaaattttatggaaatgagaagtaggggcaacaaaaacaataaagatagcctcagtaaaagagacaacaacaaaaatagctgaaaaactgaagaataggataataataataataattctgataagagggagcaaacaaggtgctctaagctagtagcctggaaccatgctctcccgtgggaaagagagaaattgcttgattacctactaaccccctctaccctgccttcatgttttcccatctttggtcatgttctcaatgagctgaagatgtgttatattatgtcttaattgtatctccccaattctttttcggtctacctctacctcttgttgggcccatcactggcagcctctctcaagtctcacctcttcattggaacttttgtgttccttctctctacatgtccnaacaatctctaatccttccttcctgcatcttttctctcgtagtgtatccntacntccntcatctcgtgaaattgatgtaatacttcaaaaaattatttttttttttgttaaaatagtattatccttcaataatnantatccatcngna</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="61991" stop="63317"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62291" g_stop="63017" g_length="727"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="728" r_length="728" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U570387" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U570387" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62291" e_stop="63017"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGAATCTGTACCTAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAGTAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTTTCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTCTCTACATGTCCGAACAATCTCTAATCCTTCCTTCCTGCATCTTTTCTCTCGTAGTGTATCCATACATCCATCATCTCGTGAAATTGATGTAATACTTCAAAAAATTA-TTTTTTTTTTGTTAAAATAGTATTATCCTTCAAAAATTATTATCCATCGGAA</genome_strand>
        <mrna_strand>TGAGAATCTGTACCTAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAATAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTATCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTCTCTACATGTCCNAACAATCTCTAATCCTTCCTTCCTGCATCTTTTCTCTCGTAGTGTATCCNTACNTCCNTCATCTCGTGAAATTGATGTAATACTTCAAAAAATTATTTTTTTTTTTGTTAAAATAGTATTATCCTTCAATAATNANTATCCATCNGNA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U567138" ref_strand="+" ref_description="SGN-U567138 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|157348146|emb|CAO22856.1| (e_value=0) unnamed; (*ATH) AT5G66770.1 (e_value=0) | Symbol: None | scarecrow transcription factor family protein | chr5:26677826-26680120 FORWARD | Aliases: MUD21.1, MUD21_1; (*SWP) sp|Q8GVE1|CIGR2_ORYSJ (e_value=3e-57) Chitin-inducible gibberellin-responsive protein 2 OS=Oryza sativa subsp. japonica GN=CIGR2; ">
      <seq>ctttgtcctccttgaaaggctgagcttttctcaattaaagctaagcacttctaacccccttttcaactctctccctcttcttggggctactctgttagtccactcaaaacttgctcaccaatttcttcttataactgttgttgttgaggtaatgtgtgagtagtgtagcttagtaagatttggtgtggagaatggcctatatgtgtacggacagtgggaatctaatggcaattgctcagcaagtcataaagcaaaagcagcagcaggagcagctccaacagcaagagcaacagcagcagcagcaacaacaattcttgggtgttaatcctttgtgtctcagcccatggacttccaatcaccagaccttaactaatagccccactttaggatatggacttaccgggtcgggttttgcagacccatttcaggtcgccggaggaacagatagcgccgagccgggatttcagttccctaacttggaacatcattcgaccgggtttaggtttgctgatttcggcggtggaccgggtggtgagtttgactcagatgagtggatggagagcttgataggcggcggagattctaccggaagctctaatcttcaatctggttgcgaagcctggcagacgagttccgaattcactaccctctacggagatccgttcccgagttgtccgaatcgactcagtatcggttctgctcctccgcctccaccttcttccgatctcaatggggtcattttttcggaaacccagaaaaatctaagcccactacaaccacagacatctccatgggtcgcaccatcttcatctcctcctccaattgttcaacccgcgagcaaagaatccaaggtggtatcagttgatgtgcagccatgtagttcccctgaaagtttttcgtcaaaaccattgttgaaatccttggtggaatgtgcaagactcgctgaatcagagcctgaaaatgtagtaaaatcactgattcgactaagggaatcagtttcccaacaaggagatccaatggagcgagttgggttctatttcttagaagctctttacaataggctttcgtcgtgtcaagcagagagaactccgtcaatctttggtactgcgccggaggagctcactttgtcatacaaagcctttaatgatgcatgtccctactcaaagtttgctcacttaacggctaatcaggcgattcttgaagcaactgaaaaagcaacgaggattcacattgtagattttggaattgttcatggtatccaatgggcagcttttttacaagctttagcaactagatcagctggtaaaccagtcagtgttagaatctctggcattccatcagtggtattgggtaactctccgtcagcttcacttttagctacagggaatcgtcttcgtgacttcgcgaagcttctggatcttaacttcgaattcgaaccaatattgactccagttcaggaacttaacgggtctagttttcgagttgatccagatgaaatcttagctgtgaacttcatgttgcagctgtacaatttactggacgaaacaaatgttggtgtaaaaactgcactgagtttagccaaatcattgaatccaagcattgtgacattgggtgagtatgaggtgaatttgaatgatgttggattcctgcagcgatttaagaacgcactgaaatactactcaactattttcgagtcattggatccgagcttgacccgagactccgctgagagagtacaagtggaaagactgatacttggccggagaattgccggagcggtgggcctagacgatggcggaaccagaagagaatgtatggaagataaagaacattggaaagaattaatggaaggggctggttttaaaccagtaacacttagccattatgcaatgagtcaagcaaaaattcttctttggaactataattatagttcatcatttggattaattgattctgcccctgggtttctctccttggcttggaaagataatccccttttgactgtttcttcatggcactaattgtgttctacatcagttctgttaggtactttcttctaagtgcttaaatttaaatttcattgctctctgtagattaaaaagttagtatagaaagatgatatttttgagcaagtttaactttgaattcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="74324" stop="77072"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74624" g_stop="76772" g_length="2149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="2149" r_length="2149" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U567138" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2149</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567138" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74624" e_stop="76772"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTGTCCTCCTTGTAAGGCTGAGCTTTTCTCAATTAAAGCTAAGCACTTCTAACCCCCTTTTCAACTCTCTCCCTCTTCTTGGGGCTACTCTGTTAGTCCACTCAAAACTTGCTCACCAATTTCTTCTTATAACTGTTGTTGTTGAGGTAATGTGTGAGTAGTGTAGCTTAGTAAGATTTGGTGTGGAGAATGGCCTATATGTGTACGGACAGTGGGAATCTAATGGCAATTGCTCAGCAAGTCATAAAGCAAAAGCAGCAGCAGGAGCAGCTCCAACAGCAAGAGCAACAGCAGCAGCAGCAACAACAATTCTTGGGTGTTAATCCTTTGTGTCTCAGCCCATGGACTTCCAATCACCAGACCTTAACTAATAGCCCCACTTTAGGATATGGACTTACCGGGTCGGGTTTTGCAGACCCATTTCAGGTCGCCGGAGGAACAGATAGCGCCGAGCCGGGATTTCAGTTCCCTAACTTGGAACATCATTCGACCGGGTTTAGGTTTGCTGATTTCGGCGGTGGACCGGGTGGTGAGTTTGACTCAGATGAGTGGATGGAGAGCTTGATAGGCGGCGGAGATTCTACCGGAAGCTCTAATCTTCAATCTGGTTGCGAAGCCTGGCAGACGAGTTCCGAATTCACTACCCTCTACGGAGATCCGTTCCCGAGTTGTCCGAATCGACTCAGTATCGGTTCTGCTCCTCCGCCTCCACCTTCTTCCGATCTCAATGGGGTCATTTTTTCGGAAACCCAGAAAAATCTAAGCCCACTACAACCACAGACATCTCCATGGGTCGCACCATCTTCATCTCCTCCTCCAATTGTTCAACCCGCGAGCAAAGAATCCAAGGTGGTATCAGTTGATGTGCAGCCATGTAGTTCCCCTGAAAGTTTTTCGTCAAAACCATTGTTGAAATCCTTGGTGGAATGTGCAAGACTCGCTGAATCAGAGCCTGAAAATGTAGTAAAATCATTGATTCGACTAAGGGAATCAGTTTCCCAACAAGGAGATCCAATGGAGCGAGTTGGGTTCTATTTCTTAGAAGCTCTTTACAATAGGCTTTCGTCGTGTCAAGCAGAGAGAACTCCGTCAATCTTTGGTACTGCGCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAATGATGCATGTCCCTACTCAAAGTTTGCTCACTTAACGGCTAATCAGGCGATTCTTGAAGCAACTGAAAAAGCAACGAGGATTCACATTGTAGATTTTGGAATTGTTCATGGTATCCAATGGGCAGCTTTTTTACAAGCTTTAGCAACTAGATCAGCTGGTAAACCAGTCAGTGTTAGAATCTCTGGCATTCCATCAGTGGTATTGGGTAACTCTCCGTCAGCTTCACTTTTAGCTACAGGGAATCGTCTTCGTGACTTCGCGAAGCTTCTGGATCTTAACTTCGAATTCGAACCAATATTGACTCCAGTTCAGGAACTTAACGGGTCTAGTTTTCGAGTTGATCCAGATGAAATCTTAGCTGTGAACTTCATGTTGCAGCTGTACAATTTACTGGACGAAACAAATGTTGGTGTAAAAACTGCACTGAGTTTAGCCAAATCATTGAATCCAAGCATTGTGACATTGGGTGAGTATGAGGTGAATTTGAATGATGTTGGATTCCTGCAGCGATTTAAGAACGCACTGAAATACTACTCAACTATTTTCGAGTCATTGGATCCGAGCTTGACCCGAGACTCCGCTGAGAGAGTACAAGTGGAAAGACTGATACTTGGCCGGAGAATTGCCGGAGCGGTGGGCCTAGACGATGGCGGAACCAGAAGAGAATGTATGGAAGATAAAGAACATTGGAAAGAATTAATGGAAGGGGCTGGTTTTAAACCAGTAACACTTAGCCATTATGCAATGAGTCAAGCAAAAATTCTTCTTTGGAACTATAATTATAGTTCATCATTTGGATTAATTGATTCTGCCCCTGGGTTTCTCTCCTTGGCTTGGAAAGATAATCCCCTTTTGACTGTTTCTTCATGGCACTAATTGTGTTCTACATCAGTTCTGTTAGGTACTTTCTTCTAAGTGCTTAAATTTAAATTTCATTGCTCTCTGTAGATTAAAAAGTTAGTATAGAAAGATGATATTTTTGAGCAAGTTTAACTTTGAATTTC</genome_strand>
        <mrna_strand>CTTTGTCCTCCTTGAAAGGCTGAGCTTTTCTCAATTAAAGCTAAGCACTTCTAACCCCCTTTTCAACTCTCTCCCTCTTCTTGGGGCTACTCTGTTAGTCCACTCAAAACTTGCTCACCAATTTCTTCTTATAACTGTTGTTGTTGAGGTAATGTGTGAGTAGTGTAGCTTAGTAAGATTTGGTGTGGAGAATGGCCTATATGTGTACGGACAGTGGGAATCTAATGGCAATTGCTCAGCAAGTCATAAAGCAAAAGCAGCAGCAGGAGCAGCTCCAACAGCAAGAGCAACAGCAGCAGCAGCAACAACAATTCTTGGGTGTTAATCCTTTGTGTCTCAGCCCATGGACTTCCAATCACCAGACCTTAACTAATAGCCCCACTTTAGGATATGGACTTACCGGGTCGGGTTTTGCAGACCCATTTCAGGTCGCCGGAGGAACAGATAGCGCCGAGCCGGGATTTCAGTTCCCTAACTTGGAACATCATTCGACCGGGTTTAGGTTTGCTGATTTCGGCGGTGGACCGGGTGGTGAGTTTGACTCAGATGAGTGGATGGAGAGCTTGATAGGCGGCGGAGATTCTACCGGAAGCTCTAATCTTCAATCTGGTTGCGAAGCCTGGCAGACGAGTTCCGAATTCACTACCCTCTACGGAGATCCGTTCCCGAGTTGTCCGAATCGACTCAGTATCGGTTCTGCTCCTCCGCCTCCACCTTCTTCCGATCTCAATGGGGTCATTTTTTCGGAAACCCAGAAAAATCTAAGCCCACTACAACCACAGACATCTCCATGGGTCGCACCATCTTCATCTCCTCCTCCAATTGTTCAACCCGCGAGCAAAGAATCCAAGGTGGTATCAGTTGATGTGCAGCCATGTAGTTCCCCTGAAAGTTTTTCGTCAAAACCATTGTTGAAATCCTTGGTGGAATGTGCAAGACTCGCTGAATCAGAGCCTGAAAATGTAGTAAAATCACTGATTCGACTAAGGGAATCAGTTTCCCAACAAGGAGATCCAATGGAGCGAGTTGGGTTCTATTTCTTAGAAGCTCTTTACAATAGGCTTTCGTCGTGTCAAGCAGAGAGAACTCCGTCAATCTTTGGTACTGCGCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAATGATGCATGTCCCTACTCAAAGTTTGCTCACTTAACGGCTAATCAGGCGATTCTTGAAGCAACTGAAAAAGCAACGAGGATTCACATTGTAGATTTTGGAATTGTTCATGGTATCCAATGGGCAGCTTTTTTACAAGCTTTAGCAACTAGATCAGCTGGTAAACCAGTCAGTGTTAGAATCTCTGGCATTCCATCAGTGGTATTGGGTAACTCTCCGTCAGCTTCACTTTTAGCTACAGGGAATCGTCTTCGTGACTTCGCGAAGCTTCTGGATCTTAACTTCGAATTCGAACCAATATTGACTCCAGTTCAGGAACTTAACGGGTCTAGTTTTCGAGTTGATCCAGATGAAATCTTAGCTGTGAACTTCATGTTGCAGCTGTACAATTTACTGGACGAAACAAATGTTGGTGTAAAAACTGCACTGAGTTTAGCCAAATCATTGAATCCAAGCATTGTGACATTGGGTGAGTATGAGGTGAATTTGAATGATGTTGGATTCCTGCAGCGATTTAAGAACGCACTGAAATACTACTCAACTATTTTCGAGTCATTGGATCCGAGCTTGACCCGAGACTCCGCTGAGAGAGTACAAGTGGAAAGACTGATACTTGGCCGGAGAATTGCCGGAGCGGTGGGCCTAGACGATGGCGGAACCAGAAGAGAATGTATGGAAGATAAAGAACATTGGAAAGAATTAATGGAAGGGGCTGGTTTTAAACCAGTAACACTTAGCCATTATGCAATGAGTCAAGCAAAAATTCTTCTTTGGAACTATAATTATAGTTCATCATTTGGATTAATTGATTCTGCCCCTGGGTTTCTCTCCTTGGCTTGGAAAGATAATCCCCTTTTGACTGTTTCTTCATGGCACTAATTGTGTTCTACATCAGTTCTGTTAGGTACTTTCTTCTAAGTGCTTAAATTTAAATTTCATTGCTCTCTGTAGATTAAAAAGTTAGTATAGAAAGATGATATTTTTGAGCAAGTTTAACTTTGAATTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U596960" ref_strand="+" ref_description="SGN-U596960 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ctatccgccgcctcgaaaataattcggttgacaatctctctgtatatagcctttaatgagatggtttttcctccaggtaagtatcgtgttgctgaggagcagggtttgcccaaagtaatgttgatcagatatacacagcatggtggttgggatgagccgcccctggtagaaaggagtcttgattcgtcgtctcagcgaagcttggatctgatggcgtagaaaggagtcttgattcgtcatctcagggaatcttggctcagatggccagggtgtagataaacttgaattcttggcgttgttggatggatttccctgtcgcgtggagagcaatatccatttgaatcagcaacgaactatccttaattggccgcccaccgcccaccgcccaaatcaggttctgctgttaacgccgtagaagatgatgaatatgacctttaagttttgagttttgaacatctccaaatctaacaaaaccaagcatctgtttctgaaaaatgtgcttgggcaaaatcctggaggactttagatgcgctatttggattcgggtgcatatcaagctcgtaaatatggtttgctcggattcctaataattgacgaccttaggtacgcattgtaggcttcgctcgtcttttcagttgatttataattaagcatgtgcagaacagaaatactgaaacaattttgtggaatgtttttaattctatgctctcagaattttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="84977" stop="86715"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85277" g_stop="85617" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="341" r_length="341" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85618" i_stop="85906" i_length="289">
            <donor d_prob="0.006" d_score="1.00"/>
            <acceptor a_prob="0.797" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85907" g_stop="85959" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="394" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85960" i_stop="86088" i_length="129">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="86089" g_stop="86415" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="721" r_length="327" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U596960" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U596960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85277" e_stop="85617"/>
          <exon e_start="85907" e_stop="85959"/>
          <exon e_start="86089" e_stop="86415"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATCCGCCGCCTCGAAAATAATTCGGTTGACAATCTCTCTGTATATAGCCTTTAATGAGATGGTTTTTCCTCCAGGTAAGTATCGTGTTGCTGAGGAGCAGGGTTTGCCCAAAGTAATGTTGATCAGATATACACAGCATGGTGGTTGGGATGAGCCGCCCCTGGTAGAAAGGAGTCTTGATTCGTCGTCTCAGCGAAGCTTGGATCTGATGGCGTAGAAAGGAGTCTTGATTCGTCATCTCAGGGAATCTTGGCTCAGATGGCCAGGGTGTAGATAAACTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCGCGTGGAGAGCAATATCCATTTGAGTATGTTGTTGTATGAAGATATATAGGTGTATAATCGGGATATAGAAGGCCTACTATCAGGGGGTCATGTCCTGTTTATATTACTTTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTAACTTTAATATAAAATGGATTTTTTTGGGGTTTCGAGGGGGGAGATGGCACGGGTTTTTTTTTCTTTTTGGCCCGGGTTCTCTCCCCTCTTGATGTGTGTGTGTTTGTGCCTTTTCTGATTCTTGTTTGCACGTTATGCTCTCATCGTCAGATCAGCAACGAACTATCCTTAATTGGCCGCCCACCGCCCACCGCCCAAATCAGGTATAGGCTAATTAGTTTGAATTTGAACTTGGGCAATTAATTAGACAAAAAACGTAGATAACTACAGGTTTTTTATATGATAGCCAACGGAAGCCACTTAATTTGTATTATCATATATATTGTTGGTAGGTTCTGCTGTTAACGCCGTAGAAGATGATGAATATGACCTTTAAGTTTTGAGTTTTGAACATCTCCAAATCTAACAAAACCAAGCATCTGTTTCTGAAAAATGTGCTTGGGCAAAATCCTGGAGGACTTTAGATGCGCTATTTGGATTCGGGTGCATATCAAGCTCGTAAATATGGTTTGCTCGGATTCCTAATAATTGACGACCTTAGGTACGCATTGTAGGCTTCGCTCGTCTTTTCAGTTGATTTATAATTAAGCATGTGCAGAACAGAAATACTGAAACAATTTTGTGGAATGTTTTTAATTCTATGCTCTCAGAATTTTGAT</genome_strand>
        <mrna_strand>CTATCCGCCGCCTCGAAAATAATTCGGTTGACAATCTCTCTGTATATAGCCTTTAATGAGATGGTTTTTCCTCCAGGTAAGTATCGTGTTGCTGAGGAGCAGGGTTTGCCCAAAGTAATGTTGATCAGATATACACAGCATGGTGGTTGGGATGAGCCGCCCCTGGTAGAAAGGAGTCTTGATTCGTCGTCTCAGCGAAGCTTGGATCTGATGGCGTAGAAAGGAGTCTTGATTCGTCATCTCAGGGAATCTTGGCTCAGATGGCCAGGGTGTAGATAAACTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCGCGTGGAGAGCAATATCCATTTGA.................................................................................................................................................................................................................................................................................................ATCAGCAACGAACTATCCTTAATTGGCCGCCCACCGCCCACCGCCCAAATCAG.................................................................................................................................GTTCTGCTGTTAACGCCGTAGAAGATGATGAATATGACCTTTAAGTTTTGAGTTTTGAACATCTCCAAATCTAACAAAACCAAGCATCTGTTTCTGAAAAATGTGCTTGGGCAAAATCCTGGAGGACTTTAGATGCGCTATTTGGATTCGGGTGCATATCAAGCTCGTAAATATGGTTTGCTCGGATTCCTAATAATTGACGACCTTAGGTACGCATTGTAGGCTTCGCTCGTCTTTTCAGTTGATTTATAATTAAGCATGTGCAGAACAGAAATACTGAAACAATTTTGTGGAATGTTTTTAATTCTATGCTCTCAGAATTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U596959" ref_strand="+" ref_description="SGN-U596959 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aggagcagggtttgcccaaagtaatgttgatcagatatacacagcatggtggttgggatgagccgcccctggtagaaaggagtcttgattcgtcgtctcagcgaagcttggatctgatggcgtagaaaggagtcttgattcgtcatctcagggaatcttggctcagatggccagggtgtagataaacttgaattcttggcgttgttggatggatttccctgtcgcgtggagagcaatatccatttgagtatgttgttgtatgaagatatataggtgtataatcgggatatagaaggcctactatcagggggtcatgtcctgtttatattactttgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctaactttaatataaaatggatttttttggggtttcgaggggggagatggcacgggtttttttttctttttggcccgggttctctcccctcttgatgtgtgtgtgtttgtgccttttctgattcttgtttgcacgttatgctctcatcgtcagatcagcaacgaactatccttaattggccgcccaccgcccaccgcccaaatcaggtataggctaattagtttgaatttgaacttgggcaattaattagacaaaaaacgtagataactacaggttttttatatgatagccaacggaagccacttaatttgtattatcatatatattgttggtaggttctgctgttaacgccgtagaagatgatgaatatgacctttaagttttgagttttgaacatctccaaatctaacaaaaccaagcatctgtttctgaaaaatgtgcttgggcaaaatcctggaggactttagatgcgctatttggattcgggtgcatatcaagctcgtaaatatggtttgctcggattcctaataattgacgaccttagccaatatgacatgttggatcagataatcaatagtaagatctttggaactatcaaatcctaacttgtggagtctctaattggaagatgagggataagggaatgagcagacacttcgaattaggcctgccatgtaatgtaggtgccgagattcaactgatatttttgtaccaacatccaaggaaccttatggaactgcttacaggaaccttatggaattgcttgctgagatgatgacttgtgaagaggatatcggctctgtataatgcagtattttgtactttccacctcttctgcaaagatggatgggataacggtcaatctggcaaagtaagaatagattattgatctaattagtcaaggattagtggccatatttcagcggtattaccaccagctgtaaatgtcatccaacgacgactactagattgttgaagattgtagagatccattcagggagtggatgaggcgtttattctggaccttgttgtgttcagaaattttgaaatactagaggtgatcagtactagcttaagggtagtcaaaggagtacagataaccgtatatcatttctattaaggcgttacatgccaattgtaaatttaaaatctttatatgtgaacgtgaagctttgtgtattttccgtggagtataggcttgaacaaacttgtttgttcctctagtgtccgtgtattaaaacttgatttgtagtgcttggca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="85071" stop="88791"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85371" g_stop="86297" g_length="927"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="927" r_length="927" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86298" i_stop="87661" i_length="1364">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.868" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87662" g_stop="87750" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="928" r_stop="1016" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87751" i_stop="87863" i_length="113">
            <donor d_prob="0.946" d_score="1.00"/>
            <acceptor a_prob="0.811" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87864" g_stop="88491" g_length="628"/>
          <reference_exon_boundary r_type="cDNA" r_start="1017" r_stop="1644" r_length="628" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U596959" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1644</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U596959" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85371" e_stop="86297"/>
          <exon e_start="87662" e_stop="87750"/>
          <exon e_start="87864" e_stop="88491"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAGCAGGGTTTGCCCAAAGTAATGTTGATCAGATATACACAGCATGGTGGTTGGGATGAGCCGCCCCTGGTAGAAAGGAGTCTTGATTCGTCGTCTCAGCGAAGCTTGGATCTGATGGCGTAGAAAGGAGTCTTGATTCGTCATCTCAGGGAATCTTGGCTCAGATGGCCAGGGTGTAGATAAACTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCGCGTGGAGAGCAATATCCATTTGAGTATGTTGTTGTATGAAGATATATAGGTGTATAATCGGGATATAGAAGGCCTACTATCAGGGGGTCATGTCCTGTTTATATTACTTTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTAACTTTAATATAAAATGGATTTTTTTGGGGTTTCGAGGGGGGAGATGGCACGGGTTTTTTTTTCTTTTTGGCCCGGGTTCTCTCCCCTCTTGATGTGTGTGTGTTTGTGCCTTTTCTGATTCTTGTTTGCACGTTATGCTCTCATCGTCAGATCAGCAACGAACTATCCTTAATTGGCCGCCCACCGCCCACCGCCCAAATCAGGTATAGGCTAATTAGTTTGAATTTGAACTTGGGCAATTAATTAGACAAAAAACGTAGATAACTACAGGTTTTTTATATGATAGCCAACGGAAGCCACTTAATTTGTATTATCATATATATTGTTGGTAGGTTCTGCTGTTAACGCCGTAGAAGATGATGAATATGACCTTTAAGTTTTGAGTTTTGAACATCTCCAAATCTAACAAAACCAAGCATCTGTTTCTGAAAAATGTGCTTGGGCAAAATCCTGGAGGACTTTAGATGCGCTATTTGGATTCGGGTGCATATCAAGCTCGTAAATATGGTTTGCTCGGATTCCTAATAATTGACGACCTTAGGTACGCATTGTAGGCTTCGCTCGTCTTTTCAGTTGATTTATAATTAAGCATGTGCAGAACAGAAATACTGAAACAATTTTGTGGAATGTTTTTAATTCTATGCTCTCAGAATTTTGATTCAAAAATTATGTACTGCGATCAATAAATTTCGACTTGAGTTCCAGATATCGGCCTCGACTTATCCTAACTGGGGTCATGCAGTAAGATTGGATTATTAAAAACATAGAACTGTTTTAAGTTTGTGTCTGCTAATGTCAATTAAGTCTTTGTATGAGTGGGCTGTTACTCTTCATTTCATTAGAAGTTGGACTAGAAGAATCTGCAGTGAAGATTTGCATTTAGATATCGATCGCTTTGCAAATACGGTACTGAAGTGGCGGGATGCTGCTTTTCAACTTCGAACATGTAACTGTTGCGGAACTCATGTAGAAATTTGGCAGTAGTGTGATATTTTGGGGGGGGGGGGGGATTTTAATGATGTAAAGAATTATGTTAACTACGGTAATCTTTAGGCATACTCAATTCTGGCGTTCATTGTGGTGGATGTAATCGGCGGAGGAGAACTCACCCAAAGATCGTGGGATTATGCAATTGAGAAATCGAGCTAGGTTGCGGTTGAGATACTCTGTTCTATTGTTGGCTGCAGACGTACATCAGATATGTATCACGCCCTGGGCTGTGGTTTGGTATAGACACTCTTTTCTGTAGGCCTGTTTTATGATATAGGCAAATCCAGTCAAGTTTTATTTATTGTTCGGTCGTGGTGAAAGGTTTGAAAAAACCGATGTTATGCAGACTTGATAGGGAGAACTACTGGTATGAAAGGGTAATGTCAGGTTTTAGCTTTGCTCAATATGTGCTCGAAACACTTTACGCATGCATAGTTTGTTCATGCTATTGAATTTTTAAAATGTACATGTCTTGAAGCTTAGAATTTGGGTGCAAAGACCCTTCGTATACTAATCTGTTACATGCTTCGGTATGTTACCATTTTGATCGGCTGTTTCCTCTTTTTTGTTGGTTAAATTTGTAACTATCCAGTTGTGAGACATCTAGGTGACCAAGTAAGTGTGTTCTGTACGCAATTTTTAGCTTTTTATTTATGTAATTTTAGTTTTCGCGGAGTATTTGATTCTGGAACTTGGAATCTTTTGAATGTAGAAGTCCTTTTGTGGTCTTCTGATGTAAATGCGTTTGCTTTTGTTAAAGTTGATGTAATTCTATACTTCCAGTTTGATCAAGTTTGTGAATATTCTGTATATATTTTTCAGCCAATTGAGGTATATGCTTTTGCTTCTGTTACGGTTGATGTAATTTTTTACCAGCTTGATCAAGTTTGTGAATCTTCTGTATATACTTTTCAGCCAATATGACATGTTGGATCAGATAATCAATAGTAAGATCTTTGGAACTATCAAATCCTAACTTGTGGAGTCTCTAATTGGAAGATGAGGTGAGAATATTTATCAGAAATTTCAAAGTGACTTCTTGAGATGGTCTGTGTATACCTATTTCTATATAGTATTAGTATTTATGTGGTAAATAATGACAATCAGTTACATGAAGGGATAAGGGAATGAGCAGACACTTCGAATTAGGCCTGCCATGTAATGTAGGTGCCGAGATTCAACTGATATTTTTGTACCAACATCCAAGGAACCTTATGGAACTGCTTACAGGAACCTTATGGAATTGCTTGCTGAGATGATGACTTGTGAAGAGGATATCGGCTCTGTATAATGCAGTATTTTGTACTTTCCACCTCTTCTGCAAAGATGGATGGGATAACGGTCAATCTGGCAAAGTAAGAATAGATTATTGATCTAATTAGTCAAGGATTAGTGGCCATATTTCAGCGGTATTACCACCAGCTGTAAATGTCATCCAACGACGACTACTAGATTGTTGAAGATTGTAGAGATCCATTCAGGGAGTGGATGAGGCGTTTATTCTGGACCTTGTTGTGTTCAGAAATTTTGAAATACTAGAGGTGATCAGTACTAGCTTAAGGGTAGTCAAAGGAGTACAGATAACCGTATATCATTTCTATTAAGGCGTTACATGCCAATTGTAAATTTAAAATCTTTATATGTGAACGTGAAGCTTTGTGTATTTTCCGTGGAGTATAGGCTTGAACAAACTTGTTTGTTCCTCTAGTGTCCGTGTATTAAAACTTGATTTGTAGTGCTTGGCA</genome_strand>
        <mrna_strand>AGGAGCAGGGTTTGCCCAAAGTAATGTTGATCAGATATACACAGCATGGTGGTTGGGATGAGCCGCCCCTGGTAGAAAGGAGTCTTGATTCGTCGTCTCAGCGAAGCTTGGATCTGATGGCGTAGAAAGGAGTCTTGATTCGTCATCTCAGGGAATCTTGGCTCAGATGGCCAGGGTGTAGATAAACTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCGCGTGGAGAGCAATATCCATTTGAGTATGTTGTTGTATGAAGATATATAGGTGTATAATCGGGATATAGAAGGCCTACTATCAGGGGGTCATGTCCTGTTTATATTACTTTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTAACTTTAATATAAAATGGATTTTTTTGGGGTTTCGAGGGGGGAGATGGCACGGGTTTTTTTTTCTTTTTGGCCCGGGTTCTCTCCCCTCTTGATGTGTGTGTGTTTGTGCCTTTTCTGATTCTTGTTTGCACGTTATGCTCTCATCGTCAGATCAGCAACGAACTATCCTTAATTGGCCGCCCACCGCCCACCGCCCAAATCAGGTATAGGCTAATTAGTTTGAATTTGAACTTGGGCAATTAATTAGACAAAAAACGTAGATAACTACAGGTTTTTTATATGATAGCCAACGGAAGCCACTTAATTTGTATTATCATATATATTGTTGGTAGGTTCTGCTGTTAACGCCGTAGAAGATGATGAATATGACCTTTAAGTTTTGAGTTTTGAACATCTCCAAATCTAACAAAACCAAGCATCTGTTTCTGAAAAATGTGCTTGGGCAAAATCCTGGAGGACTTTAGATGCGCTATTTGGATTCGGGTGCATATCAAGCTCGTAAATATGGTTTGCTCGGATTCCTAATAATTGACGACCTTAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAATATGACATGTTGGATCAGATAATCAATAGTAAGATCTTTGGAACTATCAAATCCTAACTTGTGGAGTCTCTAATTGGAAGATGAG.................................................................................................................GGATAAGGGAATGAGCAGACACTTCGAATTAGGCCTGCCATGTAATGTAGGTGCCGAGATTCAACTGATATTTTTGTACCAACATCCAAGGAACCTTATGGAACTGCTTACAGGAACCTTATGGAATTGCTTGCTGAGATGATGACTTGTGAAGAGGATATCGGCTCTGTATAATGCAGTATTTTGTACTTTCCACCTCTTCTGCAAAGATGGATGGGATAACGGTCAATCTGGCAAAGTAAGAATAGATTATTGATCTAATTAGTCAAGGATTAGTGGCCATATTTCAGCGGTATTACCACCAGCTGTAAATGTCATCCAACGACGACTACTAGATTGTTGAAGATTGTAGAGATCCATTCAGGGAGTGGATGAGGCGTTTATTCTGGACCTTGTTGTGTTCAGAAATTTTGAAATACTAGAGGTGATCAGTACTAGCTTAAGGGTAGTCAAAGGAGTACAGATAACCGTATATCATTTCTATTAAGGCGTTACATGCCAATTGTAAATTTAAAATCTTTATATGTGAACGTGAAGCTTTGTGTATTTTCCGTGGAGTATAGGCTTGAACAAACTTGTTTGTTCCTCTAGTGTCCGTGTATTAAAACTTGATTTGTAGTGCTTGGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U596961" ref_strand="+" ref_description="SGN-U596961 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aggagcagggtttgcccaaagtaatgttgatcagatatacacagcatggtggttgggatgagccgcccctggtagaaaggagtcttgattcgtcgtctcagcgaagcttggatctgatggcgtagaaaggagtcttgattcgtcatctcagggaatcttggctcagatggccagggtgtagataaacttgaattcttggcgttgttggatggatttccctgtcgcgtggagagcaatatccatttgagtatgttgttgtatgaagatatataggtgtataatcgggatatagaaggcctactatcagggggtcatgtcctgtttatattactttgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctaactttaatataaaatggatttttttggggtttcgaggggggagatggcacgggtttttttttctttttggcccgggttctctcccctcttgatgtgtgtgtgtttgtgccttttctgattcttgtttgcacgttatgctctcatcgtcagatcagcaacgaactatccttaattggccgcccaccgcccaccgcccaaatcaggtataggctaattagtttgaatttgaacttgggcaattaattanacaaaaaacgtanannnctacnngttttttatatgatagccnacggaagccacttaatttgtattatcatata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="85071" stop="86376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85371" g_stop="86076" g_length="706"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="706" r_length="706" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U596961" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U596961" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85371" e_stop="86076"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAGCAGGGTTTGCCCAAAGTAATGTTGATCAGATATACACAGCATGGTGGTTGGGATGAGCCGCCCCTGGTAGAAAGGAGTCTTGATTCGTCGTCTCAGCGAAGCTTGGATCTGATGGCGTAGAAAGGAGTCTTGATTCGTCATCTCAGGGAATCTTGGCTCAGATGGCCAGGGTGTAGATAAACTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCGCGTGGAGAGCAATATCCATTTGAGTATGTTGTTGTATGAAGATATATAGGTGTATAATCGGGATATAGAAGGCCTACTATCAGGGGGTCATGTCCTGTTTATATTACTTTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTAACTTTAATATAAAATGGATTTTTTTGGGGTTTCGAGGGGGGAGATGGCACGGGTTTTTTTTTCTTTTTGGCCCGGGTTCTCTCCCCTCTTGATGTGTGTGTGTTTGTGCCTTTTCTGATTCTTGTTTGCACGTTATGCTCTCATCGTCAGATCAGCAACGAACTATCCTTAATTGGCCGCCCACCGCCCACCGCCCAAATCAGGTATAGGCTAATTAGTTTGAATTTGAACTTGGGCAATTAATTAGACAAAAAACGTAGATAACTACAGGTTTTTTATATGATAGCCAACGGAAGCCACTTAATTTGTATTATCATATA</genome_strand>
        <mrna_strand>AGGAGCAGGGTTTGCCCAAAGTAATGTTGATCAGATATACACAGCATGGTGGTTGGGATGAGCCGCCCCTGGTAGAAAGGAGTCTTGATTCGTCGTCTCAGCGAAGCTTGGATCTGATGGCGTAGAAAGGAGTCTTGATTCGTCATCTCAGGGAATCTTGGCTCAGATGGCCAGGGTGTAGATAAACTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCGCGTGGAGAGCAATATCCATTTGAGTATGTTGTTGTATGAAGATATATAGGTGTATAATCGGGATATAGAAGGCCTACTATCAGGGGGTCATGTCCTGTTTATATTACTTTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTAACTTTAATATAAAATGGATTTTTTTGGGGTTTCGAGGGGGGAGATGGCACGGGTTTTTTTTTCTTTTTGGCCCGGGTTCTCTCCCCTCTTGATGTGTGTGTGTTTGTGCCTTTTCTGATTCTTGTTTGCACGTTATGCTCTCATCGTCAGATCAGCAACGAACTATCCTTAATTGGCCGCCCACCGCCCACCGCCCAAATCAGGTATAGGCTAATTAGTTTGAATTTGAACTTGGGCAATTAATTANACAAAAAACGTANANNNCTACNNGTTTTTTATATGATAGCCNACGGAAGCCACTTAATTTGTATTATCATATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U563950" ref_strand="+" ref_description="SGN-U563950 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>caattctggcgttcattgtggtggatgtaatcggcggaggagaactcacccaaagatcgtgggattatgcaattgagaaatcgagctaggttgcggttgagatactctgttctattgttggctgcagacgtacatcagatatgtatcacgccctgggctgtggtttggtatagacactcttttctgtaggcctgttttatgatataggcaaatccagtcaagttttatttattgttcggtcgtggtgaaaggtttgaaaaaaccgatgttatgcagacttgatagggagaactactggtatgaaagggtaatgtcaggttttagctttgctcaatatgtgctcgaaacactttacgcatgcatagtttgttcatgctattgaatttttaaaatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="86517" stop="87511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86817" g_stop="87211" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="395" r_length="395" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U563950" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U563950" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86817" e_stop="87211"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTCTGGCGTTCATTGTGGTGGATGTAATCGGCGGAGGAGAACTCACCCAAAGATCGTGGGATTATGCAATTGAGAAATCGAGCTAGGTTGCGGTTGAGATACTCTGTTCTATTGTTGGCTGCAGACGTACATCAGATATGTATCACGCCCTGGGCTGTGGTTTGGTATAGACACTCTTTTCTGTAGGCCTGTTTTATGATATAGGCAAATCCAGTCAAGTTTTATTTATTGTTCGGTCGTGGTGAAAGGTTTGAAAAAACCGATGTTATGCAGACTTGATAGGGAGAACTACTGGTATGAAAGGGTAATGTCAGGTTTTAGCTTTGCTCAATATGTGCTCGAAACACTTTACGCATGCATAGTTTGTTCATGCTATTGAATTTTTAAAATGT</genome_strand>
        <mrna_strand>CAATTCTGGCGTTCATTGTGGTGGATGTAATCGGCGGAGGAGAACTCACCCAAAGATCGTGGGATTATGCAATTGAGAAATCGAGCTAGGTTGCGGTTGAGATACTCTGTTCTATTGTTGGCTGCAGACGTACATCAGATATGTATCACGCCCTGGGCTGTGGTTTGGTATAGACACTCTTTTCTGTAGGCCTGTTTTATGATATAGGCAAATCCAGTCAAGTTTTATTTATTGTTCGGTCGTGGTGAAAGGTTTGAAAAAACCGATGTTATGCAGACTTGATAGGGAGAACTACTGGTATGAAAGGGTAATGTCAGGTTTTAGCTTTGCTCAATATGTGCTCGAAACACTTTACGCATGCATAGTTTGTTCATGCTATTGAATTTTTAAAATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U596958" ref_strand="+" ref_description="SGN-U596958 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ctccctgaatggatctctacaatcttcaacaatctagtagtcgtcgttggatgacatttacagctggtggtaataccgctgaaatatggccactaatccttgactaattagatcaataatctattcttactttgccagattgaccgttatcccatccatctttgcagaagaggtggaaagtacaaaatactgcattatacagagccgatatcctcttcacaagtcatcatctcagcaagcaattccataaggttcctgtaagcagttccataaggttccttggatgttggtacaaaaatatcagttgaatctcggcacctacattacatggcaggcctaattcgaagtgtctgctcattcccttatcccttcatgtaactgattgtcattatttaccacataaatactaatactatatagaaataggtatacacagaccatctcaagaagtcactttgaaatttctgataaatattctcacctcatcttccaattagagactccacaagttaggatttgatagttccaaagatcttactattgattatctgatccaacatgtcatattggctgaaaagtatatacagaagattcacaaacttgatcaagctggtaaaaaattacatcaaccgtaacagaagcaaaagcatatacctcanntggctgaaaaatatatacagaatattcacaaacttgatcaaactggaagtatagaattacntcaactttaacaaaagcaaacgcatttacntcanaanancacaaaannacttctacnttcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="-" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="88531" stop="87147"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88231" g_stop="87447" g_length="785"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="785" r_length="785" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="-" ref_id="SGN-U596958" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>785</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U596958" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88231" e_stop="87447"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCCTGAATGGATCTCTACAATCTTCAACAATCTAGTAGTCGTCGTTGGATGACATTTACAGCTGGTGGTAATACCGCTGAAATATGGCCACTAATCCTTGACTAATTAGATCAATAATCTATTCTTACTTTGCCAGATTGACCGTTATCCCATCCATCTTTGCAGAAGAGGTGGAAAGTACAAAATACTGCATTATACAGAGCCGATATCCTCTTCACAAGTCATCATCTCAGCAAGCAATTCCATAAGGTTCCTGTAAGCAGTTCCATAAGGTTCCTTGGATGTTGGTACAAAAATATCAGTTGAATCTCGGCACCTACATTACATGGCAGGCCTAATTCGAAGTGTCTGCTCATTCCCTTATCCCTTCATGTAACTGATTGTCATTATTTACCACATAAATACTAATACTATATAGAAATAGGTATACACAGACCATCTCAAGAAGTCACTTTGAAATTTCTGATAAATATTCTCACCTCATCTTCCAATTAGAGACTCCACAAGTTAGGATTTGATAGTTCCAAAGATCTTACTATTGATTATCTGATCCAACATGTCATATTGGCTGAAAAGTATATACAGAAGATTCACAAACTTGATCAAGCTGGTAAAAAATTACATCAACCGTAACAGAAGCAAAAGCATATACCTCAATTGGCTGAAAAATATATACAGAATATTCACAAACTTGATCAAACTGGAAGTATAGAATTACATCAACTTTAACAAAAGCAAACGCATTTACATCAGAAGACCACAAAAGGACTTCTACATTCAAAA</genome_strand>
        <mrna_strand>CTCCCTGAATGGATCTCTACAATCTTCAACAATCTAGTAGTCGTCGTTGGATGACATTTACAGCTGGTGGTAATACCGCTGAAATATGGCCACTAATCCTTGACTAATTAGATCAATAATCTATTCTTACTTTGCCAGATTGACCGTTATCCCATCCATCTTTGCAGAAGAGGTGGAAAGTACAAAATACTGCATTATACAGAGCCGATATCCTCTTCACAAGTCATCATCTCAGCAAGCAATTCCATAAGGTTCCTGTAAGCAGTTCCATAAGGTTCCTTGGATGTTGGTACAAAAATATCAGTTGAATCTCGGCACCTACATTACATGGCAGGCCTAATTCGAAGTGTCTGCTCATTCCCTTATCCCTTCATGTAACTGATTGTCATTATTTACCACATAAATACTAATACTATATAGAAATAGGTATACACAGACCATCTCAAGAAGTCACTTTGAAATTTCTGATAAATATTCTCACCTCATCTTCCAATTAGAGACTCCACAAGTTAGGATTTGATAGTTCCAAAGATCTTACTATTGATTATCTGATCCAACATGTCATATTGGCTGAAAAGTATATACAGAAGATTCACAAACTTGATCAAGCTGGTAAAAAATTACATCAACCGTAACAGAAGCAAAAGCATATACCTCANNTGGCTGAAAAATATATACAGAATATTCACAAACTTGATCAAACTGGAAGTATAGAATTACNTCAACTTTAACAAAAGCAAACGCATTTACNTCANAANANCACAAAANNACTTCTACNTTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U572228" ref_strand="+" ref_description="SGN-U572228 Tomato 200607#2 [46 ESTs aligned] ">
      <seq>cggcaagaggagatatttttcttctaggattctatccgccgcctcgcaaataagtcggttgacaatctctctatatatagcctgtaattagatagtttctccagtcattctagccttcttttccgccggatgagtaacgtggattccttaagcaggttgctggggagcagggtcgttttgcccaaagtattgtcgatcaggtatgaacagcgtgatggctcgaatgatccgcccctggtagtaaggagtcttgattcgtcatctcagggctgagatggcgtagaaaggagtcttgatacgtcttcacaaggaatcttggctcagattgtgtagaggagagtcttgattcgtcatctcaaggaatcttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagaggtataggtggggcataaaagccctaatatcaggggtgatgtcccgttttaaattaccctgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctatatttaatataaattggatttttcggggttttgagggggagatagcacggatttttttttttggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtctctcaacgagctatccttaatttgccgcccacccaaatgtaagtcaaggcagaagaagattatgaaggtgaacgttcaagattgaacatcgatttcatcagtgctaacaactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcataataggctcgtaatcagggttgcttggattcctaataatagacctcaggtatgcttcgtggatgcttgtccttgatttgatttatgataaagcatgtgcagaacaaaaatactgaactaatttgtggtgttggagaacgtttccaactctgcacttccgaaattttgatttagaaaatttttactgtacatacactgcgatacttgaattcctagatattgacgcatcctaactggtgtcctgcaagattcaattataagaaactgagaactgaaatatataagttctctgcctgctgatgtcaattaagtctctttgcgcgagtggttgttgctcttcattacattcatagttgggccagaaggagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatctcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggcgggataatgcttattcaacttggagcggaagatgcatgcagaaatttttgtggtagtgagaaattttgataatagtgggaagaaaattttggctatggtcatctttggcattactcaactctggcgtttatttgctcaatcgacactctgcacatacacaatctgttcatgctattatgctgttacatgatgtacataccttgaagcttagaatttgggtgcacaggccctttgttacacttttccggttatatgctttgccatgttagcactgactggctttctttctttttcctgtaaatatccggttgagatatttaggtgtctttctatgatgtgaagtgatccggcattttcgagtgtgtcctgtttggacttgtaacaatttgtttatgtatctttagttttggcagaggatgtatgttttgatacatgaagcttaaaagtgcagaaatgctttgtagttttctgaggttaatgattttacttctgtttcagttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="89939" stop="92550"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90241" g_stop="91034" g_length="794"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="806" r_length="794" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91035" i_stop="91139" i_length="105">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.703" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91140" g_stop="92250" g_length="1111"/>
          <reference_exon_boundary r_type="cDNA" r_start="807" r_stop="1917" r_length="1111" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U572228" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1905</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U572228" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90241" e_stop="91034"/>
          <exon e_start="91140" e_stop="92250"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATTTTTCTTCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAGTTTTCTGAGGTTAATGATTTTACTTCTGTTTCAGTTG</genome_strand>
        <mrna_strand>ATATTTTTCTTCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAG.........................................................................................................TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATCAGGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAGTTTTCTGAGGTTAATGATTTTACTTCTGTTTCAGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U572229" ref_strand="+" ref_description="SGN-U572229 Tomato 200607#2 [7 ESTs aligned] ">
      <seq>gctaggattctatccgccgcctcgcaaataagtcggttgacaatctctctctatatatccttgtaattagatagtttctccagccattctagccttcttttcctccgggtaagtaacgtggattccttaagcagggttgttttgcccaaagtattgtcgatcaggtatgtacagcgtgatggctcggatgatccccccctggttgtaaggagtcttgattcgtcatctcagggctgagatggcgtagaaaggagtctttatacgtcttctcagggaatcttggctcagatggtgtagaggagagtcttgactcgtcatctcaaggaatcttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagaggtatagttggggcataaaagccctaatatcaggggtgatgtcccgttttaaattactctgttactgctctggcctttgccatgtcgggtgcgcttgcatggcaggtccctatatttaatataaattggatttttcggggttttgagggggagatagcacggattttttttttggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtctctcaacgagctatccttaatttgccgcccacccaaatgtaagtcaaggcagaagaagattatgaaggtgaacgttcaagattgaacatcgatttcatcagtgctaacaactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcataataggctcgtaattatggttgcttggattcctaataatagacctcagattcaattataagaaactgagaactgaaatatataagttctctgcctgctgatgtcaattaagtctctttgcgcgagtggttgttgctcttcattacattcatagttgggccagaaggagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatctcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggcgggataatgcttattcaacttggagcggaagatgcatgcagaaatttttgtggtagtgagaaattttgataatagtgggaagaaaattttggctatggtcatctttggcattacttaactctggcgtttatttgctcaatcgacactctgcacatacacaatctgttcttgctattatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="89952" stop="92228"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90251" g_stop="91034" g_length="784"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="769" r_length="769" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91035" i_stop="91139" i_length="105">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.703" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91140" g_stop="91309" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="770" r_stop="939" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91310" i_stop="91508" i_length="199">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91509" g_stop="91928" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="940" r_stop="1359" r_length="420" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U572229" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>1374</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U572229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90251" e_stop="91034"/>
          <exon e_start="91140" e_stop="91309"/>
          <exon e_start="91509" e_stop="91928"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCC-TGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATG</genome_strand>
        <mrna_strand>GCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTCTATATATCCTTGTAATTAGATAGTTTCTCCAGCCATTCTAGCCTTCTTTTCCTCCGGGTAAGTAACGTGGATTCCTTAAGCAGG--G-T-----------T-GTTTTGCCCAAAGTATTGTCGATCAGGTATGTACAGCGTGATGGCTCGGATGATCCCCCCCTGGTTGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTTATACGTCTTCTCAGGGAATCTTGGCTCAGATGGTGTAGAGGAGAGTCTTGACTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGTTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACTCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGA-TTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAG.........................................................................................................TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAG.......................................................................................................................................................................................................ATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTTAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCTTGCTATTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U572227" ref_strand="+" ref_description="SGN-U572227 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>aggattctatccgccgcctcgcaaataagtcggttgacaatctctctatatatagcctgtaattagatagtttctccagtcattctagccttcttttccgccggatgagtaacgtggattccttaagcaggttgctggggagcagggtcgttttgcccaaagtattgtcgatcaggtatgaacagcgtgatggctcgaatgatccgcccctggtagtaaggagtcttgattcgtcatctcagggctgagatggcgtagaaaggagtcttgatacgtcttcacaaggaatcttggctcagattgtgtagaggagagtcttgattcgtcatctcaaggaatcttggctcagatggctagggtgccagatgaatttgaattcttggcgttgttggatggatttccctgtcataatcagaagcgtcgagagcaatacccataggaagttgttgttgtatgaagatgtatagagatcagcagtctctcaacgagctatccttaatttgccgcccacccaaattcaaggcagaagaagattatgaaggtgaacgttcaagattgaacatcgatttcatcagtgctaacaactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcataataggctcgtaattatggttgcttggattcctaataatagacctcaggtatgcttcgtggatgcttgtccttgatttgatttatgataaagcatgtgcagaacaaaaatactgaactaatttgtggtgttggagaacgtttccaactctgcacttccgaaattttgatttagaaaatttttactgtacatacactgcgatacttgaattcctagatattgacgcatcctaactggtgtcctgcaagattcaattataagaaactgagaactgaaatatataagttctctgcctgctgatgtcaattaagtctctttgcgcgagtggttgttgctcttcattacattcattagttgggccagaaggagctactgaattgcggttcttcaaatatttagttgataagcgatttgcatttaaataccaaatctcagatttgcatttaaattccaaaccttaatcgctttgcaaatatggtactgaactggcgggataatgcttattcaacttggagcggaagatgcatgcagaaatttttgtggtagtgagaaattttgataatagtgggaagaaaattttggctatggtcatctttggcattactcaactctggcgtttatttgctcaatcgacactctgcacatacacaatctgttcatgctattatgctgttacatgatgtacataccttgaagcttagaatttgggtgcacaggccctttgttacacttttccggttatatgctttgccatgttagcactgactggctttctttctttttcctgtaaatatccggttgagatatttaggtgtctttctatgatgtgaagtgatccggcattttcgagtgtgtcctgtttggacttgtaacaatttgtttatgtatctttagttttggcagaggatgtatgttttgatacatgaagcttaaaagtgcagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="89954" stop="92502"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90254" g_stop="90722" g_length="469"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="469" r_length="469" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90723" i_stop="90981" i_length="259">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.451" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90982" g_stop="91029" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="470" r_stop="517" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91030" i_stop="91139" i_length="110">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.703" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91140" g_stop="92202" g_length="1063"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="1581" r_length="1064" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U572227" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1580</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U572227" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90254" e_stop="90722"/>
          <exon e_start="90982" e_stop="91029"/>
          <exon e_start="91140" e_stop="92202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCA-TAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAA</genome_strand>
        <mrna_strand>AGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAG...................................................................................................................................................................................................................................................................ATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAAT..............................................................................................................TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATTAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U572226" ref_strand="+" ref_description="SGN-U572226 Tomato 200607#2 [5 ESTs aligned] ">
      <seq>ggcccgggatctctcccctcttggtgtgtgtgtgtgttttatgccttctctgattcttgtttgcacgttatgctctgcatcgtcagatcagcagtctctcaacgagctatccttaatttgccgcccacccaaatgtaaggtacaggctaattagatagcatttgaactttgcaattaattagactaaaaaaacccagatagctagttttttgcaattatcatatagtattggtagtttgtgcagtcaaggcagaagaagattatgaaggtgaacgttcaagattgaacatcgatttcatcagtgctaacaactccaaatctagtgcactatctgtggacaaaatctactcggattcagatatgcataataggctcgtaattatggttgcttggattcctaataatagacctcaggtatgcttcgtggatgcttgtccttgatttgatttatgataaagcatgtgcagaacaaaaatactgaactaatttgtggtgttgggagaacgtttccaactctgcacttccgaaattttgatttagaaaatttttactgtacatacactgcgatacttgaattcctagatattgacgcatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="90596" stop="91790"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90896" g_stop="91490" g_length="595"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U572226" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U572226" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90896" e_stop="91490"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTT-GGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCC</genome_strand>
        <mrna_strand>GGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U604233" ref_strand="+" ref_description="SGN-U604233 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gaccggagagatcaaaatgaactctcgagatggtctgtgaatacctattagtatttgctaacgtggtaaatggcgataatcaatctaaccaagagatgttacggcaattcacttgaatatgttccaagttcatgaaaacagaggaagtggatgttattacagaaattatttcagtagctgaggtgggtacagctccaagtagtgaggagacacttcttattaggcatgcatgtaatgtagttgccgaaattcaacagacgattataaaccaacacctaaggaatctttgtggattgtggaattgcttgctgagatgttgacttgttaaggagacgcaggcctagtatggtgcagtattttgtactttcctcctcctctatggagacggactctggcaagtcagaacagatcattgatctaatccatcggagattcaagggtatagcagtagtaccaccaaatgtaagtgtttatccaacaatgactactaggttgtgtaaagactgcagagaggagaaagatcatttgccgttgagggtgtataagtgatatttggcatttgccaattgtgaatataagatccgtgaagcttattgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="92106" stop="93301"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92405" g_stop="93001" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="597" r_length="597" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U604233" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U604233" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92405" e_stop="93001"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACCGGAGAGATCAAAATGAACTCTCGAGATGGTCTGTGAATACCTATTAGTATTTGCTAACGTGGTAAATGGCGATAATCAATCTAACCAAGAGATGTTACGGCAATTCACTTGAATATGTTCCAAGTTCATGAAAACAGAGGAAGTGGATGTTATTACAGAAATTATTTCAGTAGCTGAGGTGGGTACAGCTCCAAGTAGTGAGGAGACACTTCTTATTAGGCATGCATGTAATGTAGTTGCCGAAATTCAACAGACGATTATAAACCAACACCTAAGGAATCTTTGTGGATTGTGGAATTGCTTGCTGAGATGTTGACTTGTTAAGGAGACGCAGGCCTAGTATGGTGCAGTATTTTGTACTTTCCTCCTCCTCTATGGAGACGGACTCTGGCAAGTCAGAACAGATCATTGATCTAATCCATCGGAGATTCAAGGGTATAGCAGTAGTACCACCAAATGTAAGTGTTTATCCAACAATGACTACTAGGTTGTGTAAAGACTGCAGAGAGGAGAAAGATCATTTGCCGTTGAGGGTGTATAAGTGATATTTGGCATTTGCCAATTGTGAATATAAGATCCGTGAAGCTTATTGT</genome_strand>
        <mrna_strand>GACCGGAGAGATCAAAATGAACTCTCGAGATGGTCTGTGAATACCTATTAGTATTTGCTAACGTGGTAAATGGCGATAATCAATCTAACCAAGAGATGTTACGGCAATTCACTTGAATATGTTCCAAGTTCATGAAAACAGAGGAAGTGGATGTTATTACAGAAATTATTTCAGTAGCTGAGGTGGGTACAGCTCCAAGTAGTGAGGAGACACTTCTTATTAGGCATGCATGTAATGTAGTTGCCGAAATTCAACAGACGATTATAAACCAACACCTAAGGAATCTTTGTGGATTGTGGAATTGCTTGCTGAGATGTTGACTTGTTAAGGAGACGCAGGCCTAGTATGGTGCAGTATTTTGTACTTTCCTCCTCCTCTATGGAGACGGACTCTGGCAAGTCAGAACAGATCATTGATCTAATCCATCGGAGATTCAAGGGTATAGCAGTAGTACCACCAAATGTAAGTGTTTATCCAACAATGACTACTAGGTTGTGTAAAGACTGCAGAGAGGAGAAAGATCATTTGCCGTTGAGGGTGTATAAGTGATATTTGGCATTTGCCAATTGTGAATATAAGATCCGTGAAGCTTATTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U568417" ref_strand="+" ref_description="SGN-U568417 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157348142|emb|CAO22852.1| (e_value=2e-85) unnamed; (*ATH) AT1G75170.1 (e_value=2e-72)  Symbol: None | SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein, similar to polyphosphoinositide binding protein Ssh1p (GI:2739044) {Glycine max}; similar to SEC14 cytosolic factor (Phosphatidylinositol/phosphatidylch... ; (*SWP) sp|Q9UU99|YJX4_SCHPO (e_value=2e-17) Uncharacterized protein C23B6.04c OS=Schizosaccharomyces pombe GN=SPCC23B6.04c; ">
      <seq>gagactacaagcgtgtgaaaaattccattttccgtctgttccgtctttgtgactgttcaagtgaatgatcacctactttgcgtgatatctctacaacttcaagtggtgttgtatacttttcccacaagaattaatttctattgtgttcatgtagagtgatcgaggggatcacaggaatcatgttccggagaaagtcgtctcgcacaattcaggcagatgattctgcagcccgtggtgcaaaggttagcgagttaagagaggctgttggacctctctctgggcgaaacttaaagttctgtaccgatgtgtgtctgaggcaatacttagaagctcgaaattggaaccttgacaaggcaaaaaaaatgctcgaagagactctcaagtggagatccacctataagcctgaagaaattcgttggcatgaagtggcacatgaaagtgaaactggcaaagtttctaagggtaattttcaagaccgacttggcagaaccgtccttataatgaggcctgggaaacagaatacatcatctccggaaggtaatattcgtcatctagtctatctgatggagagtgctatccttaacctgccagaaggccaagaacaaatgtcttgnttgatagacttcaatggatggtcattgaacaccaacattcccattaaaactgcaagaaatattatctacntcttgcagaatcattatccagagaggcttgctatagttgttctttatagtccacctaganttttcgaggcattttggnaanancaagtttgngtatcccaataacaaagatagcgnnnnttnangaagacttttttcgatnctgngaatcttccaagnngagtttnggggaaangccncnttgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="93388" stop="95669"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93687" g_stop="93860" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="174" r_length="174" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93861" i_stop="94114" i_length="254">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.580" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94115" g_stop="94182" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="242" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="94183" i_stop="94407" i_length="225">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.857" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="94408" g_stop="94584" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="419" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="94585" i_stop="94746" i_length="162">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="94747" g_stop="94845" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="518" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="94846" i_stop="94938" i_length="93">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.789" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="94939" g_stop="95184" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="765" r_length="247" r_score="0.967"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="95185" i_stop="95292" i_length="108">
            <donor d_prob="0.960" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="95293" g_stop="95396" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="766" r_stop="869" r_length="104" r_score="0.827"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U568417" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>868</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U568417" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93687" e_stop="93860"/>
          <exon e_start="94115" e_stop="94182"/>
          <exon e_start="94408" e_stop="94584"/>
          <exon e_start="94747" e_stop="94845"/>
          <exon e_start="94939" e_stop="95184"/>
          <exon e_start="95293" e_stop="95396"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGACTACAAGCGTGTGAAAAATTCCATTTTCCGTCTGTTCCCTCTTTGTAACTGTTCAAGTGAATGATCACCTACTTTGCGTGATATCTCTACAACTTCAAGTGGTGTTGTATACTTTTCCCACAAGAATTAATTTCTATTGTGTTCATGTAGAGTGATCGAGGGGATCACAGGTTTCTCTCTTTATTTCTCTCTTTTGTATGATATCTTTCAAGTCCCAAATCTTTCTGCAATCTTCCTAATTCCTTTCCAAGAAAAGTAATCGTTTTTTTCTTAAAGTCATTCTCATCTCTTTTCCTTTTGCTTTATTTACTTTTTCATAATCCAGCTTATCTTACCGGAATTCTAAATTTACTAGTGGTAGTCTTAGTGATGAAGCAGAGTCGCATATACATGTAACTGCTAGCACCATTTTTTCAATTAACAGGAATCATGTTCCGGAGAAAGTCGTCTCGCACAATTCAGGCAGATGATTCTGCAGCCCGTGGTGCAAAGGTAACAGACAAAGTTATATTCTTACATTCCGATTTGCTTCATCAAATCCACCATGACAAAGTATCTGTCTCAATTACCCCTAGAAAATCCATTTAATGTTTAATAATAACTAGATTGACCACTGGGTAAATGTTCCATTCAAATTGAATTGTCAGGACAATTAAACTGAGCAATAACTGGTAGTTAAAACTATAGAACAGGGATTAATTTTCTATGGCAAACCAGGTTAGCGAGTTAAGAGAGGCTGTTGGACCTCTCTCTGGGCGAAACTTAAAGTTCTGTACCGATGTGTGTCTGAGGCAATACTTAGAAGCTCGAAATTGGAACCTTGACAAGGCAAAAAAAATGCTCGAAGAGACTCTCAAGTGGAGATCCACCTATAAGCCTGAAGAAATTCGTTGGGTGATTGTTCTTTGACCTTTTCCATCTATATACACTTTGTACTCTCAACTTTGTCATGAACTAACCAAGATCGCGGTTATCCATCTAAAAGAATTGGATCGCTTGGTAGTATAATGTTGGAAGATCAATGATAAATTATTAATGATCTCACAATGTTCACAGCATGAAGTGGCACATGAAAGTGAAACTGGCAAAGTTTCTAAGGGTAATTTTCAAGACCGACTTGGCAGAACCGTCCTTATAATGAGGCCTGGGAAACAGGTTAGTGTTCTTACTTTTTAAATTAAAATCTAATCTATATATCTGAAGTTTACAGACTGGAGTATCCGAATTGTTCTGTTTCATGGATGACAGAATACATCATCTCCGGAAGGTAATATTCGTCATCTAGTCTATCTGATGGAGAGTGCTATCCTTAACCTGCCAGAAGGCCAAGAACAAATGTCTTGGTTGATAGACTTCAATGGATGGTCATTGAACACCAACATTCCCATTAAAACTGCAAGAGATATTATCTACATTTTGCAGAATCATTATCCAGAGAGGCTTGCTATAGTTGTTCTTTATAGTCCACCTAGATTTTTCGAGGCATTTTGG-AAGGTAAGATTCTTCCTACAGGCGGGTTCCTTTTGGTCAATCACAATTTGATCATTCATTCTCTGTACGTAGGTAGTGAAATATTTTATTGATTCGAAAACATTTGAGAAGATCAAGTTTGTGTATCCCAATAACAAAGATAGCGTGGAGTTGATGAAGACTTTTTTCGATACTGAGAATCTTCCAAG-TGAGTTTGGGGGAAAAGCCACATTGAA</genome_strand>
        <mrna_strand>GAGACTACAAGCGTGTGAAAAATTCCATTTTCCGTCTGTTCCGTCTTTGTGACTGTTCAAGTGAATGATCACCTACTTTGCGTGATATCTCTACAACTTCAAGTGGTGTTGTATACTTTTCCCACAAGAATTAATTTCTATTGTGTTCATGTAGAGTGATCGAGGGGATCACAG..............................................................................................................................................................................................................................................................GAATCATGTTCCGGAGAAAGTCGTCTCGCACAATTCAGGCAGATGATTCTGCAGCCCGTGGTGCAAAG.................................................................................................................................................................................................................................GTTAGCGAGTTAAGAGAGGCTGTTGGACCTCTCTCTGGGCGAAACTTAAAGTTCTGTACCGATGTGTGTCTGAGGCAATACTTAGAAGCTCGAAATTGGAACCTTGACAAGGCAAAAAAAATGCTCGAAGAGACTCTCAAGTGGAGATCCACCTATAAGCCTGAAGAAATTCGTTGG..................................................................................................................................................................CATGAAGTGGCACATGAAAGTGAAACTGGCAAAGTTTCTAAGGGTAATTTTCAAGACCGACTTGGCAGAACCGTCCTTATAATGAGGCCTGGGAAACAG.............................................................................................AATACATCATCTCCGGAAGGTAATATTCGTCATCTAGTCTATCTGATGGAGAGTGCTATCCTTAACCTGCCAGAAGGCCAAGAACAAATGTCTTGNTTGATAGACTTCAATGGATGGTCATTGAACACCAACATTCCCATTAAAACTGCAAGAAATATTATCTACNTCTTGCAGAATCATTATCCAGAGAGGCTTGCTATAGTTGTTCTTTATAGTCCACCTAGANTTTTCGAGGCATTTTGGNAAN............................................................................................................ANCAAGTTTGNGTATCCCAATAACAAAGATAGCG-NNNNTTNANGAAGACTTTTTTCGATNCTGNGAATCTTCCAAGNNGAGTTTNGGGGAAANGCCNCNTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U596267" ref_strand="+" ref_description="SGN-U596267 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gtctgttccctctttgtaactgttcaagtgaatgatcacctactttgcgtgatatctctacaacttcaagtggtgttgtatacttttcccacaagaattaatttctattgtgttcatgtagagtgatcgaggggatcacaggtttctctctttatttctctcttttgtatgatatctttcaagtcccaaatctttctgcaatcttcctaattcctttccaagaaaagtaatcgtttttttcttaaagtcattctcatctcttttccttttgctttatttactttttcataatccagcttatcttaccggaattctaaatttactagtggtagtcttagtgatgaagcagagtcgcatatacatgtaactgctagcaccattttttcaattaacaggaatcatgttccggagaaagtcgtctcgcacaattcaggcagatgattctgcagcccgtggtgcaaaggtaacagacaaagttatattcttacattccgatttgcttcatcaaatccaccatgacaaagtatctgtctcaattacccctagaaaatccatttaatgnttaataataactagattgaccactgggtaaatgntccattcaaattgaattgtcaggacaattaaactgagcaataactgggtagttaaaactatagaacagggnntaattttctatggcaaaccnggttagcgagttaanagaggctgntgganctctctctgggcnaanctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="93420" stop="94754"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93720" g_stop="94454" g_length="735"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="736" r_length="736" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U596267" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U596267" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93720" e_stop="94454"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTGTTCCCTCTTTGTAACTGTTCAAGTGAATGATCACCTACTTTGCGTGATATCTCTACAACTTCAAGTGGTGTTGTATACTTTTCCCACAAGAATTAATTTCTATTGTGTTCATGTAGAGTGATCGAGGGGATCACAGGTTTCTCTCTTTATTTCTCTCTTTTGTATGATATCTTTCAAGTCCCAAATCTTTCTGCAATCTTCCTAATTCCTTTCCAAGAAAAGTAATCGTTTTTTTCTTAAAGTCATTCTCATCTCTTTTCCTTTTGCTTTATTTACTTTTTCATAATCCAGCTTATCTTACCGGAATTCTAAATTTACTAGTGGTAGTCTTAGTGATGAAGCAGAGTCGCATATACATGTAACTGCTAGCACCATTTTTTCAATTAACAGGAATCATGTTCCGGAGAAAGTCGTCTCGCACAATTCAGGCAGATGATTCTGCAGCCCGTGGTGCAAAGGTAACAGACAAAGTTATATTCTTACATTCCGATTTGCTTCATCAAATCCACCATGACAAAGTATCTGTCTCAATTACCCCTAGAAAATCCATTTAATGTTTAATAATAACTAGATTGACCACTGGGTAAATGTTCCATTCAAATTGAATTGTCAGGACAATTAAACTGAGCAATAACT-GGTAGTTAAAACTATAGAACAGGGATTAATTTTCTATGGCAAACCAGGTTAGCGAGTTAAGAGAGGCTGTTGGACCTCTCTCTGGGCGAAACTT</genome_strand>
        <mrna_strand>GTCTGTTCCCTCTTTGTAACTGTTCAAGTGAATGATCACCTACTTTGCGTGATATCTCTACAACTTCAAGTGGTGTTGTATACTTTTCCCACAAGAATTAATTTCTATTGTGTTCATGTAGAGTGATCGAGGGGATCACAGGTTTCTCTCTTTATTTCTCTCTTTTGTATGATATCTTTCAAGTCCCAAATCTTTCTGCAATCTTCCTAATTCCTTTCCAAGAAAAGTAATCGTTTTTTTCTTAAAGTCATTCTCATCTCTTTTCCTTTTGCTTTATTTACTTTTTCATAATCCAGCTTATCTTACCGGAATTCTAAATTTACTAGTGGTAGTCTTAGTGATGAAGCAGAGTCGCATATACATGTAACTGCTAGCACCATTTTTTCAATTAACAGGAATCATGTTCCGGAGAAAGTCGTCTCGCACAATTCAGGCAGATGATTCTGCAGCCCGTGGTGCAAAGGTAACAGACAAAGTTATATTCTTACATTCCGATTTGCTTCATCAAATCCACCATGACAAAGTATCTGTCTCAATTACCCCTAGAAAATCCATTTAATGNTTAATAATAACTAGATTGACCACTGGGTAAATGNTCCATTCAAATTGAATTGTCAGGACAATTAAACTGAGCAATAACTGGGTAGTTAAAACTATAGAACAGGGNNTAATTTTCTATGGCAAACCNGGTTAGCGAGTTAANAGAGGCTGNTGGANCTCTCTCTGGGCNAANCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U573619" ref_strand="+" ref_description="SGN-U573619 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|195651973|gb|ACG45454.1| (e_value=1e-64) maf-like; (*ATH) AT5G66550.1 (e_value=1e-62) | Symbol: None | Maf family protein, contains Pfam domain PF02545: Maf-like protein | chr5:26576856-26578404 REVERSE | Aliases: K1F13.22, K1F13_22; (*SWP) sp|Q54TC5|MAFL2_DICDI (e_value=3e-31) Maf-like protein DDB_0218334 OS=Dictyostelium discoideum GN=DDB_0218334; ">
      <seq>gcttatctccaaagctaaccgttgccctttgaagaagaggtgagaaagagagcgccaaacaaatggctccgaagaacttgtcgttcaagataatcttgggttcttcctcaatggcacgtcgcaaaatattagcggacatgggttatgaatttacagtaatgggtgctgacattgatgaaaagagcattaggaaagataatgcagaggaattagtgatagctctagcagaggcaaaggcagatgctattatgtcaaggctcaaaacaactgatcagttggacgaaaatacccattccactctgttaattactgcagatacagtggcggtttacgaaggaattgttagagaaaaaccatcaagcaaggaagaagcgcgtcagttcatcaaaagttattctggtggtcaagccacagttgtaggatctgttgttgtgaccaaccttacaaaggggataagaaaaggagcttgggaaaggtccgaggtatatttccatgacatacctgatgagattattgacagcctgattgaggagggaataatacttaatgttgctggtggcttaatgcttgaacatccattgacgctgccctttgttgacactctgattggaactgctgacagtgttatgggactcccaagaaatctcactgaaaaacttatcgaagaagccctctagctgctggaattccacaagggaataaatatcctttcgatcacctctcctgaaatgtacttgattactagatttttgagtttataaacttgtctttctgaagtgaacattggaaacatgcacgaaaagaaatactggctgaaagacatttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="97129" stop="102027"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97429" g_stop="97517" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97518" i_stop="97652" i_length="135">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97653" g_stop="97724" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="161" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="97725" i_stop="98017" i_length="293">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98018" g_stop="98092" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="236" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98093" i_stop="98864" i_length="772">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98865" g_stop="98948" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="320" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98949" i_stop="99493" i_length="545">
            <donor d_prob="0.950" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="99494" g_stop="99563" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="390" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="99564" i_stop="99667" i_length="104">
            <donor d_prob="0.154" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="99668" g_stop="99759" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="482" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="99760" i_stop="101208" i_length="1449">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="101209" g_stop="101250" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="524" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="101251" i_stop="101322" i_length="72">
            <donor d_prob="0.910" d_score="1.00"/>
            <acceptor a_prob="0.738" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="101323" g_stop="101403" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="605" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="101404" i_stop="101501" i_length="98">
            <donor d_prob="0.704" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="101502" g_stop="101728" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="606" r_stop="832" r_length="227" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U573619" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>832</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U573619" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97429" e_stop="97517"/>
          <exon e_start="97653" e_stop="97724"/>
          <exon e_start="98018" e_stop="98092"/>
          <exon e_start="98865" e_stop="98948"/>
          <exon e_start="99494" e_stop="99563"/>
          <exon e_start="99668" e_stop="99759"/>
          <exon e_start="101209" e_stop="101250"/>
          <exon e_start="101323" e_stop="101403"/>
          <exon e_start="101502" e_stop="101728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTATCTCCAAAGCTAACCGTTGCCCTTTGAAGAAGAGGTGAGAAAGAGAGCGCCAAACAAATGGCTCCGAAGAACTTGTCGTTCAAGGTTTGCTTTTTCACCCACTCATGAACTGTTCTCCTTTATCTCAAATCTTTCTTTTAAGGATTAAAACGGAAGTTAATGTTTTCTTTAATATACTGAATGTACATGTAAATCACTAATGGTTCTATATGTTTAAAGATAATCTTGGGTTCTTCCTCAATGGCACGTCGCAAAATATTAGCGGACATGGGTTATGAATTTACAGTAATGGTACGTTCAATTTTGTTTTAAAAGATTCTGTATTTTGCTAAAACTTGCACTGTCTGTCCAGATTAAGTTTTGGACCTGCTCGGGCTCGTTTGGCGTGAGAGATTAAAAATAAAATAGTGATGAGATAAGGAATGGTGATGGATAAACTTATTCCACTATTTATATCATAGTGAATACATACTAGGATAAGTTATCCCACAATAGCTAACTCATGAGATAACTTATTTCCAATTAAACGAGCTCTTAGTTTTCTAGTGTATTGCGACTTATATTTTAATTTTTTTTTGGAGTAGGGTGCTGACATTGATGAAAAGAGCATTAGGAAAGATAATGCAGAGGAATTAGTGATAGCTCTAGCAGAGGCAAAGGTATACTACCTCTTCTCTATTACCGGTGTGTTTGGTTATATGGTTGATAAAAATGTTCTCAAAAATATTTTTTCTAGAAAAACGATTATTTAAGTTAATTGTCTCCTCCCACCACCTAATGCCCCTACTCCACACCCTCATACTAAGTAAGAAATCCACTTGTTTCCTGATGACGTTTTTTTTGTCTTCGAGTTCATTTCACTGGTGAAGTAATTGGTAGAAGTTCACCATTTAGGTTTGAAACTATAATCAATTTTTTTTGTCCAAGTAACATGAAACAAAGATCTTCGTAGTGTATGTTATTCTTCTAAGTAACACATATCGCCCTATAAAAGTAAAAAGGCCAGGAGTAATTTTAGTGCAGTTATTAGAGGAGTTCTGTTGATAATTGTGTAGAACATGATATCAATAAGAAGGTCAAAATTCAATATTCTTGTGATTGGATGAGATTTATTATTTTGGCATTCCCTTGGCATCTTTTGTGTTCCGACTAACTTCCAATCATTCTGCCCATCAGTGATTTATGTTATGGAATTTCCATTTGATGGTTAGGGACTATCTATTAATGGGTACTTCTCTTCCGCTGATAATGGGCTGATTCTGGATAGTTCGTCTCACTATAATCAACTCACTTGCTTTCCTTCCATTTCCATGACACTCTAGTTGTGCCGTATAAATCAAGACGGAGGGAGTAATATGTATTACAGTTATATCATGTTCCAGTGCTCAAAGAGCAAATCTTATGTTTACTTACTGGTTCTGTTCTTCTTAGGCAGATGCTATTATGTCAAGGCTCAAAACAACTGATCAGTTGGACGAAAATACCCATTCCACTCTGTTAATTACTGCAGATACAGTATGTTTACTTTTCTTCATTAGAATATTTCAAGTGCTATAGCCTTGATTAGTTTAATACTAAGCCCATATTCACAGGTATTTCTCTGATTGAATGGAGAGCTTATCAGAAACCATTAAATGATTGTTTTTCATTTATTGCAAAACTAGTTGGTGATATAGGCACATTTAGCTATAATTATAAAACAGCAGTACAATATTTTAGCTAGTAACGTTGCATAGAGAAGTTTGGAGAAAGTGTTGAAATTAGCTTGCTGTTAGTTTCTTTTTATTAGACAAATAATGCAAGCAGCTGGCCTATCTTGTATGACATTTTAGATTGACATTTATTGTGTCGTTAGCTCATTTCTAATCTTTTGTTTTGCTCTCTAAATTCATTCGAAATTTGATTCTCCTCACTTGCTCCATGATTTGACAATCTTAATTTAATATCACTGTTAAATAGCATATTGCAAAATTAGAATACTTGAGCCTTCTAATGATTTTTCTCTTGGATGAAGAATAGATCTTTTTGGCTATATCTTACCTACATCTATTGGTATTGAGGTGGCGGTTTACGAAGGAATTGTTAGAGAAAAACCATCAAGCAAGGAAGAAGCGCGTCAGTTCATCAAAAGTATGTTTGTATTTGCCGTCTGCAGTTCCTCCAGTATCTCAGCTAAGCAGGTTATTCTTTTTCTTTTCTACCAATATTACTGTTCTTGTTATTATGAATTGCAGGTTATTCTGGTGGTCAAGCCACAGTTGTAGGATCTGTTGTTGTGACCAACCTTACAAAGGGGATAAGAAAAGGAGCTTGGGAAAGGTCCGAGGTATATCTTTTACTCCATATGAAGTAATTCCTACATGATGGAGACTATTGAAATACAACTATGCATTTATATAGTACATTTTTACTTAAGTTGATATGTTCCAATGGTGAATAGGCTTAAAAACATCTGATGCATAAGTGTATGTGATGTGGTGGTGAGGATTAAGGTGATGTGACATTTCGAAGATATGTCAGGTATCTGATAATAGATATTTGAATAAGTATATGCTTATCCCGGCCTGTGACTTTGAGCTTATTTGATCCCCATCCTTACAAATGATTTTTTTTTTCAGAAACTAGAAGGATTATTTTATAGTTATATTCACCGTGTGCGAGACTTTAAATAAAGAGAACGTACATTCTTTGCTAAATTAGACTGCAACAAGGAAGAGCTCAATTGCCTGATTTTACCAACTTTCCTTATGCCAATATGAATAACCATAGTTTACAAGTGGAGTTCTTGCAGAAAAATTCCTTTCCGGTTTCTATTTGTGAATTGTGACATTAATTTCATCCTTGAAATTCGGCATAGGTCTTTGAATGTTGGGATCATTAGAATACATGAATTACTGGGTCTCTGGTATAATATTGGAGCCTCAAAATTACCGGTAATTGATGTGACTGTTGTAGGCTTATTCATAAGTCTATGAGTGGAAAGAGACCTTAACCTTGACTTATCTACTAATTTAAACAGAGGCACAAGTTGAGTCAATAATGGAGAGAGACTATGAATAGACTGATTTCTATTTAGCACACGTGAGCATTACAACTCCAGGCATAACAAGGGAGTATTTTTTGAAAATTGCTTAGGTTTCTAAATTTTCATCGCTGCTAGGCTTTGGCATAGAGAATTGTATCTGCTATTACCTCACCATCATGATCTTTGAACCATCTTAATCCTGTCAAGTATGATCAGAATGGTTGTTGTTACAGTTGTACTACTCAATACTGTCAAACTGGAAGTGCAGAGATCTTTTGTTTCGTATTACGAAGGCAGGAAAGAGTGAATGCTGATGAAAACTGGTGTATTTACATCTTTATGTGAAGGGCAGAAAGAGGGTGAATGTGGATGGAATCTGGTTCATTACAGCCCATCAACATTACTCTCTCCAGTCTCCACCCATGAATTTGTTTCCCAAGACTTCTTTTTACTGACCATACCAGTTTGTAAGGATGTCGAGAATGCTTCCCCTTTTATCTGCTTATCAGAACACCAATACAATTGCCTCACAGCTCTCAGTTTATTAGTTAGCTTGTCTGATCTTCTCTAAGCCCTCCTTTTGTTACTATTATGAATTTGTTCTTTCTTGATGGTGTGGTGCAACATGATTTTCTCGGAAACCTTCTTGCTGACTTAACTATTAGTGCAATGGTGTAATATGGAGTATTACACAATTATACAACTGTGATTGTTTAACATGGAGTAAATTGTTCTTCTGCCTAATTGCAGGTATATTTCCATGACATACCTGATGAGATTATTGACAGCCTGGTAAATATGACTCTGTTCTTAAATAGGGGATGTTCTTTACCTGCAACATTAACTATTAGTACATTTGTATAGATTGAGGAGGGAATAATACTTAATGTTGCTGGTGGCTTAATGCTTGAACATCCATTGACGCTGCCCTTTGTTGACACTCTGGTTCGTCTCCCTCTCTCTCTCTCTCACCCTCTCTTTGAAGCTTGGAACTGCCGATTACTGACCTGTTGTTTATACTGTTACTTCCCAATACTTTGTAGATTGGAACTGCTGACAGTGTTATGGGACTCCCAAGAAATCTCACTGAAAAACTTATCGAAGAAGCCCTCTAGCTGCTGGAATTCCACAAGTGAATAAATATCCTTTCGATCACCTCTCCTGAAATGTACTTGATTACTAGATTTTTGAGTTTATAAACTTGTCTTTCTGAAGTGAACATTGGAAACATGCACGAAAGGAAATACTGGCTGAAAGACATTCTTCTTTC</genome_strand>
        <mrna_strand>GCTTATCTCCAAAGCTAACCGTTGCCCTTTGAAGAAGAGGTGAGAAAGAGAGCGCCAAACAAATGGCTCCGAAGAACTTGTCGTTCAAG.......................................................................................................................................ATAATCTTGGGTTCTTCCTCAATGGCACGTCGCAAAATATTAGCGGACATGGGTTATGAATTTACAGTAATG.....................................................................................................................................................................................................................................................................................................GGTGCTGACATTGATGAAAAGAGCATTAGGAAAGATAATGCAGAGGAATTAGTGATAGCTCTAGCAGAGGCAAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATGCTATTATGTCAAGGCTCAAAACAACTGATCAGTTGGACGAAAATACCCATTCCACTCTGTTAATTACTGCAGATACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGGTTTACGAAGGAATTGTTAGAGAAAAACCATCAAGCAAGGAAGAAGCGCGTCAGTTCATCAAAA........................................................................................................GTTATTCTGGTGGTCAAGCCACAGTTGTAGGATCTGTTGTTGTGACCAACCTTACAAAGGGGATAAGAAAAGGAGCTTGGGAAAGGTCCGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATATTTCCATGACATACCTGATGAGATTATTGACAGCCTG........................................................................ATTGAGGAGGGAATAATACTTAATGTTGCTGGTGGCTTAATGCTTGAACATCCATTGACGCTGCCCTTTGTTGACACTCTG..................................................................................................ATTGGAACTGCTGACAGTGTTATGGGACTCCCAAGAAATCTCACTGAAAAACTTATCGAAGAAGCCCTCTAGCTGCTGGAATTCCACAAGGGAATAAATATCCTTTCGATCACCTCTCCTGAAATGTACTTGATTACTAGATTTTTGAGTTTATAAACTTGTCTTTCTGAAGTGAACATTGGAAACATGCACGAAAAGAAATACTGGCTGAAAGACATTTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U589070" ref_strand="+" ref_description="SGN-U589070 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|194466227|gb|ACF74344.1| (e_value=7e-15) Maf-like; (*ATH) AT5G42770.1 (e_value=1e-16) | Symbol: None | Maf family protein, contains Pfam domain PF02545: Maf-like protein | chr5:17169295-17171706 FORWARD | Aliases: MJB21.15, MJB21_15; ">
      <seq>aaccgttgccctttgaagaagaggtgagaaagagagcgccaaacaaatggctccgaagaacttgtcgttcaagataatcttgggttcttcctcaatggcacgtcgcaaaatattagcggacatgggttatgaatttacagtaatgggtgctgacattgatgaaaagagcattaggaaagataatgcagaggaattagtgatagctctagcagaggcaaaggtatactacctcttctctattaccggtgtgtttggttatatggttgataaaaatgttctcaaaaatattttttctagaaaaacgattatttaagttaattgtctcctcccaccacctaatgcccctactccacaccctcatactaagtaagaaatccacttgtttcctgatgacgttttttttgtcttcgagttcatttcactggtgaagtaattggtagaagttcaccatttaggtttgaaactataatcaattttttttgtccaagtaacatgaaacaaagatcttcgtagtgtatgttattcttctaagtaacacatatcgccctataaaagtaaaaaggccaggagtaattttagtgcagttattagaggagttctgttgataattgtgtagaacatgatatcaataanaaggtcaaaattcaatattcttgtgantgnatgaganttattattttggcattcccttggcatcttttgtgttccnactaacttccaatcattctgcccatcagtgatttatgntatggnatttncatttganggnnagggnc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="97145" stop="98948"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97445" g_stop="97517" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97518" i_stop="97652" i_length="135">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97653" g_stop="97724" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="145" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="97725" i_stop="98017" i_length="293">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98018" g_stop="98648" g_length="631"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="776" r_length="631" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U589070" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>776</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589070" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97445" e_stop="97517"/>
          <exon e_start="97653" e_stop="97724"/>
          <exon e_start="98018" e_stop="98648"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCGTTGCCCTTTGAAGAAGAGGTGAGAAAGAGAGCGCCAAACAAATGGCTCCGAAGAACTTGTCGTTCAAGGTTTGCTTTTTCACCCACTCATGAACTGTTCTCCTTTATCTCAAATCTTTCTTTTAAGGATTAAAACGGAAGTTAATGTTTTCTTTAATATACTGAATGTACATGTAAATCACTAATGGTTCTATATGTTTAAAGATAATCTTGGGTTCTTCCTCAATGGCACGTCGCAAAATATTAGCGGACATGGGTTATGAATTTACAGTAATGGTACGTTCAATTTTGTTTTAAAAGATTCTGTATTTTGCTAAAACTTGCACTGTCTGTCCAGATTAAGTTTTGGACCTGCTCGGGCTCGTTTGGCGTGAGAGATTAAAAATAAAATAGTGATGAGATAAGGAATGGTGATGGATAAACTTATTCCACTATTTATATCATAGTGAATACATACTAGGATAAGTTATCCCACAATAGCTAACTCATGAGATAACTTATTTCCAATTAAACGAGCTCTTAGTTTTCTAGTGTATTGCGACTTATATTTTAATTTTTTTTTGGAGTAGGGTGCTGACATTGATGAAAAGAGCATTAGGAAAGATAATGCAGAGGAATTAGTGATAGCTCTAGCAGAGGCAAAGGTATACTACCTCTTCTCTATTACCGGTGTGTTTGGTTATATGGTTGATAAAAATGTTCTCAAAAATATTTTTTCTAGAAAAACGATTATTTAAGTTAATTGTCTCCTCCCACCACCTAATGCCCCTACTCCACACCCTCATACTAAGTAAGAAATCCACTTGTTTCCTGATGACGTTTTTTTTGTCTTCGAGTTCATTTCACTGGTGAAGTAATTGGTAGAAGTTCACCATTTAGGTTTGAAACTATAATCAATTTTTTTTGTCCAAGTAACATGAAACAAAGATCTTCGTAGTGTATGTTATTCTTCTAAGTAACACATATCGCCCTATAAAAGTAAAAAGGCCAGGAGTAATTTTAGTGCAGTTATTAGAGGAGTTCTGTTGATAATTGTGTAGAACATGATATCAATAAGAAGGTCAAAATTCAATATTCTTGTGATTGGATGAGATTTATTATTTTGGCATTCCCTTGGCATCTTTTGTGTTCCGACTAACTTCCAATCATTCTGCCCATCAGTGATTTATGTTATGGAATTTCCATTTGATGGTTAGGGAC</genome_strand>
        <mrna_strand>AACCGTTGCCCTTTGAAGAAGAGGTGAGAAAGAGAGCGCCAAACAAATGGCTCCGAAGAACTTGTCGTTCAAG.......................................................................................................................................ATAATCTTGGGTTCTTCCTCAATGGCACGTCGCAAAATATTAGCGGACATGGGTTATGAATTTACAGTAATG.....................................................................................................................................................................................................................................................................................................GGTGCTGACATTGATGAAAAGAGCATTAGGAAAGATAATGCAGAGGAATTAGTGATAGCTCTAGCAGAGGCAAAGGTATACTACCTCTTCTCTATTACCGGTGTGTTTGGTTATATGGTTGATAAAAATGTTCTCAAAAATATTTTTTCTAGAAAAACGATTATTTAAGTTAATTGTCTCCTCCCACCACCTAATGCCCCTACTCCACACCCTCATACTAAGTAAGAAATCCACTTGTTTCCTGATGACGTTTTTTTTGTCTTCGAGTTCATTTCACTGGTGAAGTAATTGGTAGAAGTTCACCATTTAGGTTTGAAACTATAATCAATTTTTTTTGTCCAAGTAACATGAAACAAAGATCTTCGTAGTGTATGTTATTCTTCTAAGTAACACATATCGCCCTATAAAAGTAAAAAGGCCAGGAGTAATTTTAGTGCAGTTATTAGAGGAGTTCTGTTGATAATTGTGTAGAACATGATATCAATAANAAGGTCAAAATTCAATATTCTTGTGANTGNATGAGANTTATTATTTTGGCATTCCCTTGGCATCTTTTGTGTTCCNACTAACTTCCAATCATTCTGCCCATCAGTGATTTATGNTATGGNATTTNCATTTGANGGNNAGGGNC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U604718" ref_strand="+" ref_description="SGN-U604718 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gctgcagggtggaaagagaccttatccttgacttatctactaatttaaacagaggcacaagttgagtcaataatggagagagactatgaatagactgatttctatttagcacacgtgagcattacaactccaggcataacaagggagtattttttgaaaattgcttaggtttctaaattttcatcgctgctaggctttggcatagagaattgtatctgctattacctcaccatcatgatctttgaaccatcttaatcctgtcaagtatgatcagaatggttgttgttacagttgtactactcaatactgtcaaactggaagtgcagagatcttttgtttcgtattacgaaggcaggaaagagtgaatgctgatgaaaactggtgtatttacatctttatgtgaagggcagaaagagggtgaatgtggatggaatctggttcattacagcccatcaacatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="100099" stop="101161"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100401" g_stop="100861" g_length="461"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="461" r_length="461" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U604718" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U604718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100401" e_stop="100861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTATGAGTGGAAAGAGACCTTAACCTTGACTTATCTACTAATTTAAACAGAGGCACAAGTTGAGTCAATAATGGAGAGAGACTATGAATAGACTGATTTCTATTTAGCACACGTGAGCATTACAACTCCAGGCATAACAAGGGAGTATTTTTTGAAAATTGCTTAGGTTTCTAAATTTTCATCGCTGCTAGGCTTTGGCATAGAGAATTGTATCTGCTATTACCTCACCATCATGATCTTTGAACCATCTTAATCCTGTCAAGTATGATCAGAATGGTTGTTGTTACAGTTGTACTACTCAATACTGTCAAACTGGAAGTGCAGAGATCTTTTGTTTCGTATTACGAAGGCAGGAAAGAGTGAATGCTGATGAAAACTGGTGTATTTACATCTTTATGTGAAGGGCAGAAAGAGGGTGAATGTGGATGGAATCTGGTTCATTACAGCCCATCAACATTA</genome_strand>
        <mrna_strand>GCTGCAGGGTGGAAAGAGACCTTATCCTTGACTTATCTACTAATTTAAACAGAGGCACAAGTTGAGTCAATAATGGAGAGAGACTATGAATAGACTGATTTCTATTTAGCACACGTGAGCATTACAACTCCAGGCATAACAAGGGAGTATTTTTTGAAAATTGCTTAGGTTTCTAAATTTTCATCGCTGCTAGGCTTTGGCATAGAGAATTGTATCTGCTATTACCTCACCATCATGATCTTTGAACCATCTTAATCCTGTCAAGTATGATCAGAATGGTTGTTGTTACAGTTGTACTACTCAATACTGTCAAACTGGAAGTGCAGAGATCTTTTGTTTCGTATTACGAAGGCAGGAAAGAGTGAATGCTGATGAAAACTGGTGTATTTACATCTTTATGTGAAGGGCAGAAAGAGGGTGAATGTGGATGGAATCTGGTTCATTACAGCCCATCAACATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U583077" ref_strand="+" ref_description="SGN-U583077 Tomato 200607#2 [16 ESTs aligned] (*GB) gi|157348132|emb|CAO22842.1| (e_value=7e-46) unnamed; (*ATH) AT2G18400.1 (e_value=1e-43) | Symbol: None | ribosomal protein L6 family protein | chr2:7996561-7997668 REVERSE | Aliases: T30D6.9, T30D6_9; (*SWP) sp|P26861|RM06_MARPO (e_value=9e-33) 60S ribosomal protein L6, mitochondrial OS=Marchantia polymorpha GN=RPL6; ">
      <seq>ggcgattggcggccaatcggccgaataatttcttgtgttgacgaacagagccctcggaaagctccactgaccggtgaactgcggatctccggcggtttttaggtttgctgaggtagcgatacagagaaagcctgctgattgataaaagtcatccaatggaagctaaattcttccgctttctcaagattgttggagttggtttcaaggctagggcagaatcagaaggtcgtctcttgtaccttaagctgggttacagccatgaggttgaactgaccgtgcctcctgcagttcgtgtcttctgtttcaaacccaatgtggtttgctgcactgggattgacaagtatagggtacaccaatttgctgcctctgtaaggagctgtaaacctcctgaagtttacaagggcaaaggtattatgtacattgatgaagtgataaaaaagaagcagggaaagaaatcaaaatgagaacccattaatcatggttctttcttgggcttggtactttttatgatgctagacaattttcctttaattatctttcctatttgtaatttcctaatgtaattttgttttctgactgctttggtatttttaaaagttagaggagttgaagatcttttaccttggtcacggaagttgctaaacatctcaatgacagtttttgtatcaacttttttcatcctttcaaatgctacaaataagtgatggacggtgttgatgaatttgtggtctttatatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="102765" stop="106413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103065" g_stop="103173" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="134" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103174" i_stop="105508" i_length="2335">
            <donor d_prob="0.726" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105509" g_stop="106113" g_length="605"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="739" r_length="605" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U583077" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U583077" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103065" e_stop="103173"/>
          <exon e_start="105509" e_stop="106113"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATTTCTTGTGTTGACGAACAGAGCCCTCGGAAAGCTCCACTGACCGGTGAACTGCGGATCTCCGGCGGTTTTTAGGTTTGCTGAGGTAGCGATACAGAGAAAGCCTGGTATGCTGTTGTTCTCATTCTTATTAGTTTCTCCTCTTTCTCATCGAAATGAATTGCTCGTTATTTGCTTAGGTTTTGTCTTTAATTAATATCTGAAAATTGTCATGCATATGAGGTGTTCGATGAAATTCATTTTTAATGTGATGTTTCTGAAATGAGATTGTTATTTCCGCCAGAAAAGTCAATCTTCACTAGGCTTCTTTTCTAGTTTTGTGTGATTTTGTTGTTTTCAGTAGACAGTTACTGACTGTTTTGGTGAGTGATAATCATAGTTACGTCTCAGGCGATTGTCATGCCATCATGCCGCTAGAAGAAATCCCTTAATGAATTTATTTGAATATTACGCTTCTGAAGTGAGAGTATGGGATAACAATTTATTCGTAGTGGTCGAATAAGTCCCTGCTCCACTCATTGGCAAGTTAGCTGAACTCATGACTGCTCCTGGGGGTTTGGTAAATGTTATTTCTGCTGACTTAAACAAGTTTGCGAAACACAAAATGCTGATTTAGAATCGGCATAATCTGTAATACTTGAAGATCAACAACCAATTCCTCTTAGACTAGCTCTTAAACCGTTCTTTTTCTTTTTCGATTTTGGTTTTCATTTTCCTAATTAGCTATTCTTTGCATCTTGAGAAGGTTTAGGAATGGTTGTTGTTGCTCATCATTTGAGTTTTTTAATTGGTCATATATCTAATTGTAGGAGTTAATTTTACCCCTTTACCCTTCATTATATTACATATCCACATCAGAAGAAACCCCTGCTTGTTCCCAGTTCCCCTGAAGTGTGAACTACATAAAATCTACTGATCATAGATTGTAAATCAACCACCTGCTTGTGAAACTCAAAGAATGATGGAGAGTTATTGAGCAAGTTGACATGCTAATAGGTGAGAAATTAAGCATGATGCTATTCCATGGTAATAAAGAATAAAAACATGGTAATACTGAAGAATACACCATTACCATTTTCAAAAAAAAAAGAAGAATAAAAACATGGATACAATTTAACAGTTACTTATGTTAGAAAACAAACAAACATGGATACAGTTTCTATGGAGGACATGCTCCTGCTAGAGTACAACAAAGCATAACAATAGGTTGATTATATGCACATGCTTTAATTGTTAATCTTATTTTAAAATTAGTCATCAGCCAATTTTCAAAGATTATATCAGAGTCATTTTAAAAGTGGTCCAGTTCTTTTCATTTAGTAGTAGAACGAAAGATCTGCTTCACCTGTTGGTACTAATGAAATTTGAATTGATTTTCTTGCTAAAGACATTTAAAAAATTCTTAATGAACATATGTTGCCAGTGAAAGGAATAATGCAATATGCTCGGTTCGAGTCTAGGGTCTATCAGAAACAACCTGTCTACCTCCTAAGGTAGGTGTAATGGCATACACTCTCCCCTCCCCAGGCCAGATACCACTTGTGAATTACACTGCGTGAGTTGTTGTTCTTGTTGGCCAGTGCCTGTGGTTCTTCTTCCGCCATCTCTCCATCGGATAAGGAAAACTGAAATTAGTCCCTGGAGCTACTGAAAGCAAATTATGCTGAAGAAGAGTGTAAAAGTGCTTAGACAAACTATTCAGAAGTGAAAACAAACTGTCTGAATTGATTTTATGAGTTAATTATCTGTATTTGTCATTTATTTCTTGAAAACAAAATCTTCCCCCATTTTTGGATCAAAAAGGAAAATCACTTTGCACACCCAAGGGACAGCCTAGTTGTCAATGAAGTGGGTTGAGCACCACAAGGTCTTAGGTTCAAATACTAGCCCAGCAGAGACAAAAAACCTATGTGATTTATTCCCATATGTTTAGCCTTCGTGACATAGTTACTAGTACATGTTGCTGGTAGAAGGTAATATGTATCCCGTGGAATCAGTCGAGATGTACACAAGTTGGTCTGGACACCATGATTATCAAAAAGAAAAAAAAGAAGTAAAATCAATTTAGTTTTCTTCCCTTCCTTGAGCAGTTTTCCTTTGTGTAGCCAAGAGACTAGTCAGATTTTCAGTCACAAAGTGGCATTGCATTTCCTTCTCTACTGTTGTGGTTGTTTTTCCCGAGTATTAGTCACAAACCATTATATTAGATGTCCTAACTTTAGAATTAATACTTGGCAGGTTTGTCTCCGATAGTGGAAAAAGAATGTTGCTGTTGTATTATCTTTTGAAACTGATTTTTTTTTTTTGAAACTGAAATTTGCTGCTGTTATATTATTGTCTAGGTGTTTTTCTTATTTGGCATGTTACGGTTGTATTATTGTCAAGGTCTTTTTCTTGTTTGGCCTAGTAATGTAGCTTTTGTCATGTCATCTCCTATTTCAGCTGATTGATAAAAGTCATCCAATGGAAGCTAAATTCTTCCGCTTTCTCAAGATTGTTGGAGTTGGTTTCAAGGCTAGGGCAGAATCAGAAGGTCGTCTCTTGTACCTTAAGCTGGGTTACAGCCATGAGGTTGAACTGACCGTGCCTCCTGCAGTTCGTGTCTTCTGTTTCAAACCCAATGTGGTTTGCTGCACTGGGATTGACAAGTATAGGGTACACCAATTTGCTGCCTCTGTAAGGAGCTGTAAACCTCCTGAAGTTTACAAGGGCAAAGGTATTATGTACATTGATGAAGTGATAAAAAAGAAGCAGGGAAAGAAATCAAAATGAGAACCCATTAATCATGGTTCTTTCTTGGGCTTGGTACTTTTTATGATGCTAGACAATTTTCCTTTAATTATCTTTCCTATTTGTAATTTCCTAATGTAATTTTGTTTTCTGACTGCTTTGGTATTTTTAAAAGTTAGAGGAGTTGAAGATCTTTTACCTTGGTCACGGAAGTTGCTAAACATCTCAATGACAGTTTTTGTATCAACTTTTTTCATCCTTTCAAATGCTACAAATAAGTGATGGACGGTGTTGATGAATTTGTGGTCTTTATATCC</genome_strand>
        <mrna_strand>TAATTTCTTGTGTTGACGAACAGAGCCCTCGGAAAGCTCCACTGACCGGTGAACTGCGGATCTCCGGCGGTTTTTAGGTTTGCTGAGGTAGCGATACAGAGAAAGCCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATTGATAAAAGTCATCCAATGGAAGCTAAATTCTTCCGCTTTCTCAAGATTGTTGGAGTTGGTTTCAAGGCTAGGGCAGAATCAGAAGGTCGTCTCTTGTACCTTAAGCTGGGTTACAGCCATGAGGTTGAACTGACCGTGCCTCCTGCAGTTCGTGTCTTCTGTTTCAAACCCAATGTGGTTTGCTGCACTGGGATTGACAAGTATAGGGTACACCAATTTGCTGCCTCTGTAAGGAGCTGTAAACCTCCTGAAGTTTACAAGGGCAAAGGTATTATGTACATTGATGAAGTGATAAAAAAGAAGCAGGGAAAGAAATCAAAATGAGAACCCATTAATCATGGTTCTTTCTTGGGCTTGGTACTTTTTATGATGCTAGACAATTTTCCTTTAATTATCTTTCCTATTTGTAATTTCCTAATGTAATTTTGTTTTCTGACTGCTTTGGTATTTTTAAAAGTTAGAGGAGTTGAAGATCTTTTACCTTGGTCACGGAAGTTGCTAAACATCTCAATGACAGTTTTTGTATCAACTTTTTTCATCCTTTCAAATGCTACAAATAAGTGATGGACGGTGTTGATGAATTTGTGGTCTTTATATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U567062" ref_strand="+" ref_description="SGN-U567062 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157348135|emb|CAO22845.1| (e_value=5e-87) unnamed; (*ATH) AT5G49555.1 (e_value=6e-85) | Symbol: None | amine oxidase-related, contains Pfam profile PF01593: amine oxidase, flavin-containing | chr5:20124455-20127862 REVERSE | Aliases: None; (*SWP) sp|Q3MHH6|CJ033_BOVIN (e_value=3e-42) Probable oxidoreductase C10orf33 homolog OS=Bos taurus; ">
      <seq>gcagtgttgaagctcggatagattccctattccctgttcaaagagttgctagtgttaaaatcagagattaggcaaaaaaaaaaaaaagttcaaaaatgtggagacaggtccgaaaatttagcagtaacagcagcttcaatgcgaaagagaagaaatgggatgctctgatcatcggcggtggtcacaacggccttacagctgccgcgtatctcgctcgttccggtctctctgttgccgttctcgagaggcgccacatcataggaggtgctgctgtcactgaagaactcattcccggtttcaagttttctcgttgcagttacctacaaagcctccttagaccctgcgttattaaagaattggagctgaagagacatggattgaagctactgaaaaggagtccttcatcattcacgcctcgtcttgacggacgctatcttctgcttggttctgacaaggagcagaactattctgagatttcaaagttttctaaatctgatgctgatgcttactcaaggtatgagagtcaactcgacaagttctgcgagttcatggacccacttctggattcgtctacaccagaaactctacaaggctcttcacaactcaatactcgtatgaagcacaaattgcgtaattcagcgttttgggctaattgtctccgtcgagcactccacttgggacaaaaggacctagtggacttgatgggacttttactcgctccaacttcaagggtttgaataactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="112087" stop="114122"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112386" g_stop="112736" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="352" r_length="352" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="112737" i_stop="112818" i_length="82">
            <donor d_prob="0.816" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="112819" g_stop="112980" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="514" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="112981" i_stop="113639" i_length="659">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113640" g_stop="113819" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="515" r_stop="694" r_length="180" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="113820" i_stop="113969" i_length="150">
            <donor d_prob="0.860" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="113970" g_stop="114020" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="695" r_stop="744" r_length="50" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U567062" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>744</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U567062" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112386" e_stop="112736"/>
          <exon e_start="112819" e_stop="112980"/>
          <exon e_start="113640" e_stop="113819"/>
          <exon e_start="113970" e_stop="114020"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGTGTTGAAGCTCGGATAGATTCCCTATTCCCTGTTCAAAGAGTTGCTAGTGTTAAAATCAGAGATTAGGCAAA-AAAAAAAAAAGTTCAAAAATGTGGAGACAGGTCCGAAAATTTAGCAGTAACAGCAGCTTCAATGCGAAAGAGAAGAAATGGGATGCTCTGATCATCGGCGGTGGTCACAACGGCCTTACAGCTGCCGCGTATCTCGCTCGTTCCGGTCTCTCTGTTGCCGTTCTCGAGAGGCGCCACATCATAGGAGGTGCTGCTGTCACTGAAGAACTCATTCCCGGTTTCAAGTTTTCTCGTTGCAGTTACCTACAAAGCCTCCTTAGACCCTGCGTTATTAAGTGAGACCTAATTATTGCAATGATTTATTGTTAGCATTGATTTATTTTTCTTCAATTATTGAGGATGCGTTATGATTAATAGAGAATTGGAGCTGAAGAGACATGGATTGAAGCTACTGAAAAGGAGTCCTTCATCATTCACGCCTCGTCTTGACGGACGCTATCTTCTGCTTGGTTCTGACAAGGAGCAGAACTATTCTGAGATTTCAAAGTTTTCTAAATCTGATGCTGATGCTTACTCAAGGTTCAGTATTTATTTTTATACTGGTCGTTACTTCAACTTTATGTATTCTCTGGCAACTTTGTTTGCTGCAATTTTATTTTAAAAGACAAAGAGGTTAAATAACCATGTTTTTCTACACGAGAATTGAACCTTGAGCAATTCATTTTGTCGAAAAAGCATTTGATTATTTTAAGGCGATTAAATGCAACAGTGCTGAGGTGAACTAGACTATAAGATGGAGATACATAGGTGTACAGCCATTTGTGTGGTGGATTAACTCATATACATCATTGAGAATGCTTCAGTTAAGCTCTGATCATGTCTATGATTGGAAAATAGATACGGCATGTAGCTCGTGTCCATATCACTGGAATCTGGTTCACCTTTCTTCAATACTGAAATTTAATGTGTTCATTGTTCTTGACACTTTCAAGATTGACATACTCAAGATGGAGAACCCAAGGGTTCTTCGCCTGCTAACTTAACGGGAAGAAAAAATAAGTTCCCTGCCAAAAATTTCCAGGCATGGAACTTGATGATAATTTAGCAGAATTTGAGGATTGAGCTCACTTAGCACCCTAAAGTCTGAATGAGAATTCATATATTTCTTTCTGCTCATCATTTTATCTATTACTATCATACTCTAAATTTTTGAGTTACCAAGTGCCACCTAATTGTAGGTATGAGAGTCAACTCGACAAGTTCTGCGAGTTCATGGACCCACTTCTGGATTCGTCTACACCAGAAACTCTACAAGGCTCTTCACAACTCAATACTCGTATGAAGCACAAATTGCGTAATTCAGCGTTTTGGGCTAATTGTCTCCGTCGAGCACTCCACTTGGGACAAAAGGACCTAGTGTAAGATGTTCTAGATGGTCCTGTTTGCATAATTTCACCAAACCTATTGTTATCAACTGGACATACTAGGGCAACATCTACTCAAATAGTATGAAGTCTCGACTTCAACTGTCATAGTCCATGTTTAATTGTTTCCACTGGACTTTTCAGGGACTTGATGGACCTTTTACTCGCTCCAGCTTCGAAGGTTTTGAATAACTG</genome_strand>
        <mrna_strand>GCAGTGTTGAAGCTCGGATAGATTCCCTATTCCCTGTTCAAAGAGTTGCTAGTGTTAAAATCAGAGATTAGGCAAAAAAAAAAAAAAGTTCAAAAATGTGGAGACAGGTCCGAAAATTTAGCAGTAACAGCAGCTTCAATGCGAAAGAGAAGAAATGGGATGCTCTGATCATCGGCGGTGGTCACAACGGCCTTACAGCTGCCGCGTATCTCGCTCGTTCCGGTCTCTCTGTTGCCGTTCTCGAGAGGCGCCACATCATAGGAGGTGCTGCTGTCACTGAAGAACTCATTCCCGGTTTCAAGTTTTCTCGTTGCAGTTACCTACAAAGCCTCCTTAGACCCTGCGTTATTAA..................................................................................AGAATTGGAGCTGAAGAGACATGGATTGAAGCTACTGAAAAGGAGTCCTTCATCATTCACGCCTCGTCTTGACGGACGCTATCTTCTGCTTGGTTCTGACAAGGAGCAGAACTATTCTGAGATTTCAAAGTTTTCTAAATCTGATGCTGATGCTTACTCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGAGAGTCAACTCGACAAGTTCTGCGAGTTCATGGACCCACTTCTGGATTCGTCTACACCAGAAACTCTACAAGGCTCTTCACAACTCAATACTCGTATGAAGCACAAATTGCGTAATTCAGCGTTTTGGGCTAATTGTCTCCGTCGAGCACTCCACTTGGGACAAAAGGACCTAGT......................................................................................................................................................GGACTTGATGGGACTTTTACTCGCTCCAACTTC-AAGGGTTTGAATAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U596481" ref_strand="+" ref_description="SGN-U596481 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157348135|emb|CAO22845.1| (e_value=1e-61) unnamed; (*ATH) AT5G49555.1 (e_value=3e-62) | Symbol: None | amine oxidase-related, contains Pfam profile PF01593: amine oxidase, flavin-containing | chr5:20124455-20127862 REVERSE | Aliases: None; (*SWP) sp|Q3MHH6|CJ033_BOVIN (e_value=5e-38) Probable oxidoreductase C10orf33 homolog OS=Bos taurus; ">
      <seq>agtgttgaagctcggatagattccctattccctgttcaaagagttctagtgtttaaatcagagattaagcaaaagaagataaagttaaaaatgtggagacaattccgaaaatttagcagtaacagcagcttcaatgcgaaagagaagaaatgggatgctctgatcatcggcggtggtcacaacggccttacagctgccgcatatctcgctcgttccggtctctctgttgccgttctcgagaggcgccacatcataggcggtgctgctgtcactgaagagctcattcccggtttcaagttttctcgttgcagttacctacaaagcctccttagaccctgcgttatcaaagaattggagctgaagagacatggattgaagctactgaaaaggagtccttcatcattcacgcctcgtcttgacggacgctatcttctgcttggttctgacaaggagcagaactattctgagatttcaaagctgtctaaatctgatgctgatgcttactcaaggtatgagagtcaactagacaagttctgcgagttcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="112088" stop="113975"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112388" g_stop="112736" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="347" r_length="347" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="112737" i_stop="112818" i_length="82">
            <donor d_prob="0.816" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="112819" g_stop="112980" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="509" r_length="162" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="112981" i_stop="113639" i_length="659">
            <donor d_prob="0.970" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113640" g_stop="113675" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="545" r_length="36" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U596481" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U596481" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112388" e_stop="112736"/>
          <exon e_start="112819" e_stop="112980"/>
          <exon e_start="113640" e_stop="113675"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGTTGAAGCTCGGATAGATTCCCTATTCCCTGTTCAAAGAGTTGCTAGTGTTAAAATCAGAGATTAGGCAAAAAAAAAAAAAGTTCAAAAATGTGGAGACAGGTCCGAAAATTTAGCAGTAACAGCAGCTTCAATGCGAAAGAGAAGAAATGGGATGCTCTGATCATCGGCGGTGGTCACAACGGCCTTACAGCTGCCGCGTATCTCGCTCGTTCCGGTCTCTCTGTTGCCGTTCTCGAGAGGCGCCACATCATAGGAGGTGCTGCTGTCACTGAAGAACTCATTCCCGGTTTCAAGTTTTCTCGTTGCAGTTACCTACAAAGCCTCCTTAGACCCTGCGTTATTAAGTGAGACCTAATTATTGCAATGATTTATTGTTAGCATTGATTTATTTTTCTTCAATTATTGAGGATGCGTTATGATTAATAGAGAATTGGAGCTGAAGAGACATGGATTGAAGCTACTGAAAAGGAGTCCTTCATCATTCACGCCTCGTCTTGACGGACGCTATCTTCTGCTTGGTTCTGACAAGGAGCAGAACTATTCTGAGATTTCAAAGTTTTCTAAATCTGATGCTGATGCTTACTCAAGGTTCAGTATTTATTTTTATACTGGTCGTTACTTCAACTTTATGTATTCTCTGGCAACTTTGTTTGCTGCAATTTTATTTTAAAAGACAAAGAGGTTAAATAACCATGTTTTTCTACACGAGAATTGAACCTTGAGCAATTCATTTTGTCGAAAAAGCATTTGATTATTTTAAGGCGATTAAATGCAACAGTGCTGAGGTGAACTAGACTATAAGATGGAGATACATAGGTGTACAGCCATTTGTGTGGTGGATTAACTCATATACATCATTGAGAATGCTTCAGTTAAGCTCTGATCATGTCTATGATTGGAAAATAGATACGGCATGTAGCTCGTGTCCATATCACTGGAATCTGGTTCACCTTTCTTCAATACTGAAATTTAATGTGTTCATTGTTCTTGACACTTTCAAGATTGACATACTCAAGATGGAGAACCCAAGGGTTCTTCGCCTGCTAACTTAACGGGAAGAAAAAATAAGTTCCCTGCCAAAAATTTCCAGGCATGGAACTTGATGATAATTTAGCAGAATTTGAGGATTGAGCTCACTTAGCACCCTAAAGTCTGAATGAGAATTCATATATTTCTTTCTGCTCATCATTTTATCTATTACTATCATACTCTAAATTTTTGAGTTACCAAGTGCCACCTAATTGTAGGTATGAGAGTCAACTCGACAAGTTCTGCGAGTTCAT</genome_strand>
        <mrna_strand>AGTGTTGAAGCTCGGATAGATTCCCTATTCCCTGTTCAAAGAGTT-CTAGTGTTTAAATCAGAGATTAAGCAAAAGAAGATAAAGTT-AAAAATGTGGAGACAATTCCGAAAATTTAGCAGTAACAGCAGCTTCAATGCGAAAGAGAAGAAATGGGATGCTCTGATCATCGGCGGTGGTCACAACGGCCTTACAGCTGCCGCATATCTCGCTCGTTCCGGTCTCTCTGTTGCCGTTCTCGAGAGGCGCCACATCATAGGCGGTGCTGCTGTCACTGAAGAGCTCATTCCCGGTTTCAAGTTTTCTCGTTGCAGTTACCTACAAAGCCTCCTTAGACCCTGCGTTATCAA..................................................................................AGAATTGGAGCTGAAGAGACATGGATTGAAGCTACTGAAAAGGAGTCCTTCATCATTCACGCCTCGTCTTGACGGACGCTATCTTCTGCTTGGTTCTGACAAGGAGCAGAACTATTCTGAGATTTCAAAGCTGTCTAAATCTGATGCTGATGCTTACTCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGAGAGTCAACTAGACAAGTTCTGCGAGTTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U566620" ref_strand="+" ref_description="SGN-U566620 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>cgggctgcaggttaatcaatcgtgttgatgtactggaagctgctactacatgttcttatgctgtgtacaattttgttacattcctcaaaagacgtttcgaaaaattctcacatctttagcataatcccttctggtgtcactagcttactaattgtgtgtgcttgactgaaatatcacaggcagatgttctgaaagtaactcttgcaactgatgcagtgatagggaccacggtaagcttttttcatgtgggttgttccagaatgtgtcgaatgatgcatggaggaacagtcaattgctgcatacattgtttgcatctataaagacttgtaatgtatatctaggatcccacatatatatgattcggcagtgctgaaaagtaaatgttctgttattctgcattaccatatatttagtgaaaatgattgaatgttttaagtgaaaaatgtgcttacttatgggatcatgtagaagtcatgtctttgcagcaaatattggacgtttcacatggcccatggtttagaaatttcttttaagttatatgcatatatccgccatacatttactggcagttctccatctgcatgaagtagcaggcttgagtacctcttggaccactctgaaattcttacaaaaacatgtangactaagagttttttgagtctctagtcaggcaggaaagaaaaacaggttcttttagtgttccccggggttttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="114304" stop="115606"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114593" g_stop="115306" g_length="714"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="715" r_length="715" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U566620" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U566620" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114593" e_stop="115306"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGTATGTATTAATTAATCGTGTTGATGTACTGGAAGCTGCTACTACATGTTCTTATGCTGTGTACAATTTTGTTACATTCCTCAAAAGACGTTTCGAAAAATTCTCACATCTTTAGCATAATCCCTTCTGGTGTCACTAGCTTACTAATTGTGTGTGCTTGACTGAAATATCACAGGCAGATGTTCTGAAAGTAACTCTTGCAACTGATGCAGTGATAGGGACCACGGTAAGCTTTTTTCATGTGGGTTGTTCCAGAATGTGTCGAATGATGCATGGAGGAACAGTCAATTGCTGCATACATTGTTTGCATCTATAAAGACTTGTAATGTATATCTAGGATCCCACATATATATGATTCGGCAGTGCTGAAAAGTAAATGTTCTGTTATTCTGCATTACCATATATTTAGTGAAAATGATTGAATGTTTTAAGTGAAAAATGTGCTTACTTATGGGATCATGTAGAAGTCATGTCTTTGCAGCAAATATTGGACGTTTCACATGGCCCATGGTTTAGAAATTTCTTTTAAGTTATATGCATATATCCGCCATACATTTACTGGCAGTTCTCCATCTGCATGAAGTAGCAGGCTTGAGTACCTCTTGGACCACTCTGAAATTCTTACAAAAACATGTAGGACTAAGAGTTTTTTGAGTCTCTAGTCAGGCAGGAAAGAAAAACAGGTTCTTTTAGTGTTCCCC-GGGTTTTGT</genome_strand>
        <mrna_strand>CGGGCTGCAGGTTAATCAATCGTGTTGATGTACTGGAAGCTGCTACTACATGTTCTTATGCTGTGTACAATTTTGTTACATTCCTCAAAAGACGTTTCGAAAAATTCTCACATCTTTAGCATAATCCCTTCTGGTGTCACTAGCTTACTAATTGTGTGTGCTTGACTGAAATATCACAGGCAGATGTTCTGAAAGTAACTCTTGCAACTGATGCAGTGATAGGGACCACGGTAAGCTTTTTTCATGTGGGTTGTTCCAGAATGTGTCGAATGATGCATGGAGGAACAGTCAATTGCTGCATACATTGTTTGCATCTATAAAGACTTGTAATGTATATCTAGGATCCCACATATATATGATTCGGCAGTGCTGAAAAGTAAATGTTCTGTTATTCTGCATTACCATATATTTAGTGAAAATGATTGAATGTTTTAAGTGAAAAATGTGCTTACTTATGGGATCATGTAGAAGTCATGTCTTTGCAGCAAATATTGGACGTTTCACATGGCCCATGGTTTAGAAATTTCTTTTAAGTTATATGCATATATCCGCCATACATTTACTGGCAGTTCTCCATCTGCATGAAGTAGCAGGCTTGAGTACCTCTTGGACCACTCTGAAATTCTTACAAAAACATGTANGACTAAGAGTTTTTTGAGTCTCTAGTCAGGCAGGAAAGAAAAACAGGTTCTTTTAGTGTTCCCCGGGGTTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U572262" ref_strand="-" ref_description="SGN-U572262 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157348135|emb|CAO22845.1| (e_value=3e-95) unnamed; (*ATH) AT5G49555.1 (e_value=1e-94) | Symbol: None | amine oxidase-related, contains Pfam profile PF01593: amine oxidase, flavin-containing | chr5:20124455-20127862 REVERSE | Aliases: None; (*SWP) sp|Q68FT3|CJ033_RAT (e_value=1e-51) Probable oxidoreductase C10orf33 homolog OS=Rattus norvegicus; ">
      <seq>caatttggccgttgacagatgnccacagttccaatgctgtaatttaagtcatccagatgctggtccacagcatggtggtaccattcacatagggccagagagcatagaagagatgcacagtgctgcacaggatgctgaaaatggcttaccatctcaacggcccataattgagatgacaattcccactgtctttgacaagacaatatctccatctggaaagcatgtgattggtttattcatccagtacacaccttataaaccctctgatggcagctgggaaaatcctgtatatagagaatcattcgctcagagatgctttagcatgatagatgaatatgctcctggatttagctcatcaattatcgggtatgatatgttgactcctccagacctcgaaagagaaattggtttgacaggaggcaatatattccacggatccatgggattagattctctgtttttaatgcggccagtgaaaggatggtaatggttctgaatgcacaagtccttcaaggactcaagtccatgaaatgatgatttttgctattatcttaacattgaattgcaggtcaaattatcggactccaattgaaggcctatacttgtgtggcagcgggacacatcccggtggtggagtaatgggcgccccaggacgcaatgctgcgcatgttgtcattgaggacttcaagaaatcatgaagcttctcttgtgtgattcttttgacgagttcaatcagttaaaataatgacatctagtctaaaacactctggtgttatagccaaatattgcgaattagttgcttaagagtctatttgaagtctattaaatattgaagtcagtttgactgatcacaagcgcaaatctcttcgattgaagaatcttcagaatgagtgaatcccctcaatgtaaagaataatgtcatgctgggaacgggaaaataagttaaggcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="117994" stop="122515"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="118294" g_stop="118395" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="118396" i_stop="119113" i_length="718">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="119114" g_stop="119226" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="215" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="119227" i_stop="120762" i_length="1536">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.533" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="120763" g_stop="120842" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="295" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="120843" i_stop="121044" i_length="202">
            <donor d_prob="0.823" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="121045" g_stop="121165" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="416" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="121166" i_stop="121681" i_length="516">
            <donor d_prob="0.644" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="121682" g_stop="122212" g_length="531"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="947" r_length="531" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U572262" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>947</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U572262" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="118294" e_stop="118395"/>
          <exon e_start="119114" e_stop="119226"/>
          <exon e_start="120763" e_stop="120842"/>
          <exon e_start="121045" e_stop="121165"/>
          <exon e_start="121682" e_stop="122212"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTTGGCCGTTGACAGATTGCCACAGTTCCAATGCTGTAATTTAAGTCATCCAGATGCTGGTCCACAGCATGGTGGTACCATTCACATAGGGCCAGAGAGGTATTCACATAGAGTTATCCATTTCAGATTCATTTTCTTCTGATCTGCATGGGTTGATTCATTTACGTAACCCAAGTACAAATAAACAAGAATATGAGTTAGTCTCCTAGCCTGTCATAAGTCCATGAACACAATGTTTCTGAAAATTTGTAGTTAACATGACGCTACGAGGATATACAAATGATTCATTTATCCTGTATGTAGGTCTTTTTTGACTTAAAAGACAAGTTGTTTACTGGTGAATAGAGAATGCCAGAATTGAGTGGAATGGATTTTAGAAGATTGATATTGTATTGAGGCTTAGTTGATTGATTGTGCTCAAATCAGTTTAGTTTGTTGCTCATTGGATGAGCAAAAGTTAAAAGCTTACTTCCATGTCAAATAGGCAAGAATCTCTTATTCCAATCTGTTGAAATGACAAGAGAGGGATGCTCGTATAGTAAACACCCTCCAACTCCAACCCTAACCCTGAGGTTATGAGTTTGAGTTCCTCTGGGAGAAAAATGCAGAACTCCTAGGGAGGGGTAAAAAACATCAGTCAAATCTGATAGTAATGATCTTTGAGTTTTTTTAACACATAACAAGAAGGTTTGCCCACAATCTATCTTTCTAATACTGACATTGAACAAATTATTATAGGTGTCATCATTCTTGCCTTTCCTGTTATTTTAATTATGATTTTAATCCATAGACAACTATATAATTTTGGTGCTTGTAGCATAGAAGAGATGCACAGTGCTGCACAGGATGCTGAAAATGGCTTACCATCTCAACGGCCCATAATTGAGATGACAATTCCCACTGTCTTTGACAAGACAATATCTCCATCTGGTACTCAAGTTTGCTTCCGAACTTGTTTATGCAATTATCTGTTTAATAATAAACTGCTTTTTGAATTTCTGTCAGAACTTGACCTCAATTCAACAATTATTGAATAGAAATTTAATAGAACAGTAGAAGTTTTTGGACAATTTTCTATTAATCAACTAAACGTAAGGAATATTACAACTTGAAACAAATGGAAAATGAAGCTAAAGTTTGAAAGTTTCCATAGATGAGTCCTTAATCTGCAGAAGAAGAATGAGTGGGATTAGGAAAGAAGAAGAAGAAAGGAGAGATCTGAGAGAAAAGAGAATAAGAGAGAAAGATACCAAATTTCTGTTCCCTCTTCTTTCCTCTGCAGAGTTGGTTAAATCAACGTAACTTGTGCTGGTTTGGTAGTGATGACGTGGCTGCATCTCCACCCTTTAATCTCATTAATCTACATCTAATCTGGACCGTTGCTTCTACCCGGTAGTTATAACTACTTATTGGAAGCCCAGGTCATGACAATCTCTATGGTGGTATTAAGTTTTTGAATTTGAAATTGTGAATTTCAACATTTTAAAAGTGAAGTTGTGACTCGTCTAGAGGTTGTCAACCTCTTAACCCCCTGAATGTTCACGCGAGGCTAAATTCAAAAAGGGTTTACTCCTCCATAACGGGAGCATTTGCCCCCCACACGCTTTATACCTTTGAGATATTTGTCTATGTGCTATGCACACTTTATGCTTTGTGTCTTTTGCCCTATATACACCTAGAACATTTTCCTTAAAATTTCTTTGAAGTAATTGATTAAAATTTATGTAATGTTGTCGATCTAAAAATAATAATTGGGTGCCTTGGAATATTATGTACATACTATTGTATGTTTTCCCATTATGATTAGATTAACGTTTCTACGTTCTTCACCTTTTGAATTTGACACAGTTATTAACTATCTTCAATATTTTTTTCTTACTTAACATATTTTAACTTGAAAGTTTATGGAGTCTGCTCCTTCATCTTAGGTTCTTGTAATTCAGTTGCTATGTTTATATGTTTTGCCTCTTTCCTATATTCGGAACAAGTTGATTTCCATTTTTTCGTCCATATTTTTTCTTTCATTTGGAGTCAAATTATTATTTACGTCATCTCAGATTAATCCTAGATAAGAAATCTTAAACCAATTCAACATGAAATAAGTGAAATTAAGACTGAAATCTTTATACAAGATCTGAAGTTATGTAAAGAAAAAATCTTTTTTGTGATGATGACTTAAGCTAAGTTAACAAAGATAGTCTTATGTTTAGAACAGCGTGAACAAGCTTTTGGAGGGAAATGAGTTTACACTGTTTGAGGGGTTAGAATACTGGAATTCCAAAATCATGTAGGGGTTTTAGGCTATTTCTCAACATGGGGGAGGGAATTCTAAATGTGCAAACATGACGAAGTAAAATAAACACATAGTATTATGTTATTCTCATTCAACAGAATAAGACAGATGTTATTTCTTGTGGTTTTCAATCAATACTAGAACTTACACATATTCATTATTGTTTTACCTAGGAAAGCATGTGATTGGTTTATTCATCCAGTACACACCTTATAAACCCTCTGATGGCAGCTGGGAAAATCCTGTATATAGAGTTAAGTATCTCTGAGTTACATTCTTTTACCCACTTTTTTCAAGTCATCTATTTCTTTTCCTTTTTCCTAGAAGGAGTAGGAGTTCTTCACTTATAACTTCGATACCTTTCAGATTTATTCACAAACTTCTTGATCCAACCTGTAGCATGTTTATGCATCACATATTTCATGTTTGTGATTAATAAAGATTTATTGCTATAGGAATCATTCGCTCAGAGATGCTTTAGCATGATAGATGAATATGCTCCTGGATTTAGCTCATCAATTATCGGGTATGATATGTTGACTCCTCCAGACCTCGAAAGAGAAATTGGTTTGACAGGTGCGCCACTGCTATCCTCTTGATCAGTTGTACCTTTTCTACTCCTCCCTGGAGAAAGAACCATTGCTGTATGGAATGTCCTTCATTAGTTTTCTTTTTTTGGTTGATAAATTAAAGGATAGGGACCCGAACACTTCATTGTTGTCCTTAAGTTGCCACAACATTGGCGAAGTTTATTGTAGTTCAACAACTGTACCATATAGTTTATGCACCACACAGAATTTAAATCATGTTCATAGCTTAATCTTCCTGTAAACTAACGTTTTATGATCAACTTACCTGACTTGTTTCTTGTTGAAGCATCAGTGTTTCACCCACAGTAGGTTATAAGTATCAGCATACTACAATCCTGGAAGATAAAACGAAACCTGATGTTTGGTTTATCTGAGCCCAGTCTAAGAAATTTGTGGATTGTTTTAGTTATGAGAACGAACGACTATCAGCTGGAGCATGCTTCATATAGTCCCTGGCAAAATGATATAGCAAATACTGATGTGTTGTATTATATGTTGACAGGAGGCAATATATTCCACGGATCCATGGGATTAGATTCTCTGTTTTTAATGCGGCCAGTGAAAGGATGGTAATGGTTCTGAATGCACAAGTCCTTCAAGGACTCAAGTCCATGAAATGATGATTTTTGCTATTATCTTAACATTGAATTGCAGGTCAAATTATCGGACTCCAATTGAAGGCCTATACTTGTGTGGCAGCGGGACACATCCCGGTGGTGGAGTAATGGGCGCCCCAGGACGCAATGCTGCGCATGTTGTCATTGAGGACTTCAAGAAATCATGAAGCTTCTCTTGTGTGATTCTTTTGACGAGTTCAATCAGTTAAAATAATGACATCTAGTCTAAAACACTCTGGTGTTATAGCCAAATATTGCGAATTAGTTGCTTAAGAGTCTATTTGAAGTCTATTAAATATTGAAGTCAGTTTGACTGATCACAAGCGCAAATCTCTTCGATTGAAGAATCTTCAGAATGAGTGAATCCCCTCAATGTAAAGAATAATGTCATGCTGGGAACGGGAAAATAAGTTAAG</genome_strand>
        <mrna_strand>CAATTTGGCCGTTGACAGATGNCCACAGTTCCAATGCTGTAATTTAAGTCATCCAGATGCTGGTCCACAGCATGGTGGTACCATTCACATAGGGCCAGAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATAGAAGAGATGCACAGTGCTGCACAGGATGCTGAAAATGGCTTACCATCTCAACGGCCCATAATTGAGATGACAATTCCCACTGTCTTTGACAAGACAATATCTCCATCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGCATGTGATTGGTTTATTCATCCAGTACACACCTTATAAACCCTCTGATGGCAGCTGGGAAAATCCTGTATATAGA..........................................................................................................................................................................................................GAATCATTCGCTCAGAGATGCTTTAGCATGATAGATGAATATGCTCCTGGATTTAGCTCATCAATTATCGGGTATGATATGTTGACTCCTCCAGACCTCGAAAGAGAAATTGGTTTGACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCAATATATTCCACGGATCCATGGGATTAGATTCTCTGTTTTTAATGCGGCCAGTGAAAGGATGGTAATGGTTCTGAATGCACAAGTCCTTCAAGGACTCAAGTCCATGAAATGATGATTTTTGCTATTATCTTAACATTGAATTGCAGGTCAAATTATCGGACTCCAATTGAAGGCCTATACTTGTGTGGCAGCGGGACACATCCCGGTGGTGGAGTAATGGGCGCCCCAGGACGCAATGCTGCGCATGTTGTCATTGAGGACTTCAAGAAATCATGAAGCTTCTCTTGTGTGATTCTTTTGACGAGTTCAATCAGTTAAAATAATGACATCTAGTCTAAAACACTCTGGTGTTATAGCCAAATATTGCGAATTAGTTGCTTAAGAGTCTATTTGAAGTCTATTAAATATTGAAGTCAGTTTGACTGATCACAAGCGCAAATCTCTTCGATTGAAGAATCTTCAGAATGAGTGAATCCCCTCAATGTAAAGAATAATGTCATGCTGGGAACGGGAAAATAAGTTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U572982" ref_strand="+" ref_description="SGN-U572982 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|22331732|ref|NP_190655.2| (e_value=1e-62) clathrin coat assembly protein -related [Arabidopsis thaliana]; (*ATH) AT3G50860.1 (e_value=1e-64) | Symbol: None | clathrin adaptor complex small chain family protein, contains Pfam profile: PF01217 clathrin adaptor complex small chain | chr3:18912978-18915178 FORWARD | Aliases: F18B3.140; (*SWP) sp|Q5RDP9|AP3S2_PONAB (e_value=9e-42) AP-3 complex subunit sigma-2 OS=Pongo abelii GN=AP3S2; ">
      <seq>acaaaagagtagctttgccagttcttctattgtgagatttacaggaagaatgataaaggcggtaatggtgattaacaccttcggcaagcctcgcctttcgaaattttacgaatttcagccagtggagaagcaacaagagctcatccgccatgtctacacagtcttaagcaacaggcctgacaatgtgagcaattttattcggagcttaggggcaattttcggtccggatacaaggctcgtgtataagcactatgctaccttatatttcgtgtttctatttgataactctgagaatgagttggccatgctcgacttaatacaagtttttgtagaaactctggacaaatgcttcagaagtgtatgcgagcttgatgtagtattcaattatagcaagatgcatatcattctagatgaaataattttaggtggtcaagtgctagaaacagattctgttgaagtcgtgaaagcagtggaagagatctcaaaattagagtcaaccactagtgctggcacattgatcaacaaatctattccgtcttggtgggctagataacacatggttcctctgtacattaccatatcttagtgttgaaaatgaactatagggaatatgacatgtatactttttcagtatggcatgttaactgacttctcaattcgtaatcatagctggatacacccttctctgagttaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="-" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="125864" stop="122941"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="125564" g_stop="125447" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="118" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="125446" i_stop="125344" i_length="103">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.443" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="125343" g_stop="125301" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="161" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="125300" i_stop="125220" i_length="81">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="125219" g_stop="125155" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="226" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="125154" i_stop="124563" i_length="592">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.600" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="124562" g_stop="124466" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="323" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="124465" i_stop="124300" i_length="166">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.848" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="124299" g_stop="124229" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="394" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="124228" i_stop="123645" i_length="584">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="123644" g_stop="123553" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="395" r_stop="486" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="123552" i_stop="123448" i_length="105">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="123447" g_stop="123238" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="696" r_length="210" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="-" ref_id="SGN-U572982" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U572982" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="125564" e_stop="125447"/>
          <exon e_start="125343" e_stop="125301"/>
          <exon e_start="125219" e_stop="125155"/>
          <exon e_start="124562" e_stop="124466"/>
          <exon e_start="124299" e_stop="124229"/>
          <exon e_start="123644" e_stop="123553"/>
          <exon e_start="123447" e_stop="123238"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAAGAGTAGCTTTGCCAGTTCTTCTATTGTGAGATTTACAGGAAGAATGATAAAGGCGGTAATGGTGATTAACACCTTCGGCAAGCCTCGCCTTTCGAAATTTTACGAATTTCAGGTTTGTGGCTCATAATTATCTTTTTTTTTTCTATTCCTAAGATCTATCTTTGATTCGATCCTGTTCAATTTTCGCTGAAATTTGTTATTGGGATTGGAATTAGCCAGTGGAGAAGCAACAAGAGCTCATCCGCCATGTCTACACAGGTAAACACACAATTTGATTAAACTGAGATTTCGTTCAGTTGAATGAGTTTTTGTTTCTTCGTTTTGGATTTCATTTTTCAGTCTTAAGCAACAGGCCTGACAATGTGAGCAATTTTATTCGGAGCTTAGGGGCAATTTTCGGTCCGGTAATTACTTGATTGTCTGGAAATTTTCAATTAGTAATTCTTCCCACATTTACTATTCGGATTATGAAAGTATCCTTCTGCAACTTTATCTAATGCTGGTGCAGGCATTTGCTATATGAGAAAATTATGTATGGATTGTACGTAACTCTATGATCTTAAACTTAAGGATTTCCACGATATATATAACAAGGACACTTTATCTAAATAGAATCGTTGATGCTGTGCAAATTCGCAGAAATACAGACATAAAACTTTCGAAATTTTGATTTCTATACCATCACCTTTGGTTTATTGTTGTATGTTAGTTATCCTCTTCCATCGAGTGAGTAAATACATACATGTAGAGAACTTACTCCATCTGAATTGTAAAATTTTAGCTAATTAATGTTGACTAAAACCAGATAAAAAATGATGTACCAAAATAGGACAAGTGGAGCCCTGTAGATACTATCATTTAGGCAACAATTTACATGCTACTGTTTTTTTAATGGTTGTGTACTACTCATTGTGATGTACAAATTAAGAAGAGTAATTTATACTCTCAACTATAAAGAGTAAATTTTAATGATAGCCATTACTATATCTTTTCCAGGATACAAGGCTCGTGTATAAGCACTATGCTACCTTATATTTCGTGTTTCTATTTGATAACTCTGAGAATGAGTTGGCCATGCTCGACTTAATACAAGGTACTTGTTTCCACTATTTACATAGTTTTATTGTGGGAAAACACATTTTTTAATTTCATGTTTAAGTTAACTATGCTTAGTTTTATTGTGGGAAGACACATTTTTTAATTTCATGTTTAAGTTAGGTAACTTTGCTTAAGTGATGATGTTGTTTTCTTTATAGCAGTTTTTGTAGAAACTCTGGACAAATGCTTCAGAAGTGTATGCGAGCTTGATGTAGTATTCAATTATAGCAAGGTAAGAGTATTGCACTAACCTATTTGTTGTATTTTATATACTTATCTTTGAAACATGAATATCCGTATGTAGAAACCAATGAGCTTGATGTAGTATTCAGTTATAGCAAGGTAAGAGTATTGCATTAACCTATTTGTTGTATTTTATATACTTATCTTTGAAACATGAATATCCGTGTATAGAAACCAATTTGGATACATAGGTGGAATATATCATTAATAAGTCTCAGAAATCAACTTCTGTTGCTAATTAGTTGCAGAACTTTCATGCTCCCTCAATGACAAACTCTGATCATTACAATGCATAAGATGTTTAGATGGACTACTATTTTCCAGACAATTCCACTTTTCCCAATATTCTCCACCATTGGGACTTTTAAGTGTTATAACTTCTAATTCACATATGGTCACTTCCATAACATAATTAATTAATGCTTCTAAAGCTCTAGTAGTAAAAGCTTGGGCTCGTTCACAATTTTACATCAAGCTTCATCCTATGCAATGCATTACAAGTGCTATTTCTCTTGCCTTTTGGGGTATCAATCAGCATATTTGTTGTGTCTAATGGATGCTTGTCTTATGCAGATGCATATCATTCTAGATGAAATAATTTTAGGTGGTCAAGTGCTAGAAACAGATTCTGTTGAAGTCGTGAAAGCAGTGGAAGAGATCTCAAAGTTTGTCTCTATCTCTCTCACTTGCATTTGTCATGATTTTTTTTTTCGAGCTTTATGTGCAAAACTTGTAAATTGTTTTAAAGAATAATTCATATCTAATTGCAGATTAGAGTCAACCACTAGTGCTGGCACATTGATCAACAAATCTATTCCGTCTTGGTGGGCTAGATAACACATGGTTCCTCTGTACATTACCATATCTTAGTGTTGAAAATGAACTATAGGGAATATGACATGTATACTTTTTCAGTTTGGCATGTTAACTGACTTCTCGATTTGTAATCATAGCTGGATACACCCTTCTCTGAGTTATCA</genome_strand>
        <mrna_strand>ACAAAAGAGTAGCTTTGCCAGTTCTTCTATTGTGAGATTTACAGGAAGAATGATAAAGGCGGTAATGGTGATTAACACCTTCGGCAAGCCTCGCCTTTCGAAATTTTACGAATTTCAG.......................................................................................................CCAGTGGAGAAGCAACAAGAGCTCATCCGCCATGTCTACACAG.................................................................................TCTTAAGCAACAGGCCTGACAATGTGAGCAATTTTATTCGGAGCTTAGGGGCAATTTTCGGTCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACAAGGCTCGTGTATAAGCACTATGCTACCTTATATTTCGTGTTTCTATTTGATAACTCTGAGAATGAGTTGGCCATGCTCGACTTAATACAAG......................................................................................................................................................................TTTTTGTAGAAACTCTGGACAAATGCTTCAGAAGTGTATGCGAGCTTGATGTAGTATTCAATTATAGCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCATATCATTCTAGATGAAATAATTTTAGGTGGTCAAGTGCTAGAAACAGATTCTGTTGAAGTCGTGAAAGCAGTGGAAGAGATCTCAAA.........................................................................................................ATTAGAGTCAACCACTAGTGCTGGCACATTGATCAACAAATCTATTCCGTCTTGGTGGGCTAGATAACACATGGTTCCTCTGTACATTACCATATCTTAGTGTTGAAAATGAACTATAGGGAATATGACATGTATACTTTTTCAGTATGGCATGTTAACTGACTTCTCAATTCGTAATCATAGCTGGATACACCCTTCTCTGAGTTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U601298" ref_strand="+" ref_description="SGN-U601298 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157348130|emb|CAO22840.1| (e_value=5e-33) unnamed; (*ATH) AT1G63810.1 (e_value=1e-24)  Symbol: None | nucleolar RNA-associated family protein / Nrap family protein, contains Pfam profile PF03813: Nrap protein; similar to nucleolar RNA-associated protein alpha (GI:18539461) (Mus musculus) | chr1:23673215-23679223 REVERSE | Aliases: T12... ; ">
      <seq>cttcttctttcggggttttagcagggttttagacaaagtgcctaaatccgcctgttctttttcaattagttcttgtcaagaaagaataattcttacagaaattgtagagcaatggcatcggatacattaacttacacggactcgatgaactttaaggtgagggaactgttgaaggaggttcagttcgaatgctcgccggaaaccactgcaactgtggacaatgttgtttctggcataaaataagcaattgataagatccccgaggaccaggttaaggctaacttggcgccggggtttgttagagatatcaatgcggataaggtggagttcacatttaagaagccaaaatctttggaaattggcgggagttattctatacattgtgttaccaaacgcgatctaaatgttgatctttttcttcacttgccaaaggagtgcttttatgaaaaagattacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="126429" stop="128909"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126729" g_stop="126998" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="270" r_length="270" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126999" i_stop="127657" i_length="659">
            <donor d_prob="0.972" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="127658" g_stop="127819" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="432" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="127820" i_stop="128584" i_length="765">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="128585" g_stop="128609" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="457" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U601298" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U601298" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126729" e_stop="126998"/>
          <exon e_start="127658" e_stop="127819"/>
          <exon e_start="128585" e_stop="128609"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTTCTTTCGGGGTTTTAGCAGGGTTTTAGACAAAGTGCCTAAATCCGCCTGTTCTTTTTCAATTAGTTCTTGTCAAGAAAGAATAATTCTTACAGAAATTGTAGAGCAATGGCATCGGATACATTAACTTACACGGACTCGATGAACTTTAAGGTGAGGGAACTGTTGAAGGAGGTTCAGTTCGAATGCTCGCCGGAAACCACTGCAACTGTGGACAATGTTGTTTCTGGCATAAAAGAAGCAATTGATAAGATCCCCGAGGACCAGGTCAATCTCTTTCTAAAACCTTTATATCATCCTTAGAACGAAAACGTAATTTATGTAGTCAAGAAATAGTAGTGGTGAATTAGAACTTCTTTTTCTTGGATAAAGTAAGTGGTAGTAATGACAACATCGAGAAGATGCAATAATTCCAAGAGGGACAAGGAAAAAAATTCACCACCATAGGCTAATCCAAGATTTTGAAGTTTCAATTCAATTTGTGGGTGCATTAGAACTTTTTTTTTTTGTGTAAGTAAGTTGTATTAATAACAGCATCAAGAAAATGCAAGAATTCCAAGAAAGTGCAAGAATTCCAAGAGGACAAGAAAAAAGAAAAACTCACCACCATAGGCTAGTCCAAGATTTTGAAGTTCTAATTCAATTTGGGGATGAATTAAAGCTTTCTTTTTTTGATGAAGTAAGTTGTATTAATAACAGCATGTAGAAGATACAAGAGGGACAAGAAAAAAAACTTAACCACCAGAGGCTAATCCAAGATTTAAAGTTCTAATTCAATATGTGGGTGAATTAGAACTTTAAATCTTGGATTAGCCTCTGGTGGTGAGTTATTTTCTTATTCAAGGAGTTCTGAAATATGCTGAGTTACTAGTTGACTCCACTGCTCCACTCCTCTCTTTTAATTCTTGTAATCATTTTGTTGACAGGTTAAGGCTAACTTGGCGCCGGGGTTTGTTAGAGATATCAATGCGGATAAGGTGGAGTTCACATTTAAGAAGCCAAAATCTTTGGAAATTGGCGGGAGTTATTCTATACATTGTGTTACCAAACGCGATCTAAATGTTGATCTTTTTCTTCACTTGCCAAAGGTGTGCTGTCTATTTCCTCTAGAAAGCTATACTCTCGAGTGTCTTAAAGCCCTACTTGATGTGTATTGTATTAAATTATATTGTAATTTATTTACTTTTCACTTTGATGCTAAGTTAAAATGTTTTAATTTGTTACACGATAATATAAGAAGCTTGGTATGTAAATAAGAAAATTCACATGTTTGAAATGTCAAAACTTTAAACTTTTAGCTCTTTCTTAGTCTATGCAATGGAGAAGGATTTATAAGCTATGAAATGTGAGAAAGTTCAAATTTCTTGAAGTCCAACTCCATTCAAGAGTTTGTTTAACAGCAATGCAGGGAACATGATGAGTAAAGCAAGCTATCTGGTTTCCATCTTCTCCTTATAGCTTCTTTTTTTACACAATACATGCCTTGTAAATTCCTAACTATGAATATGGAGAAATTGAAAGAAGTTTTACTTGATGAATCCTAGTCGCGGGCTTATCTTACTGGAAAAAAGTGGCCTGGAACACACACATGTAATGGTGGTTTTATAGTTGTGATAGACCATAAGTTTTTGTTCATGGGATCTGTCATAGGTGAAAGCTCATTTGTCGGTATGCTGAATGAATAGTGTGAAGATCGTACCTTATGCTTCATGTAAACATAGTTGGGACTAATTGATTTGGGCGAAATGATCATGCAGGTCTTATTGTAAATAACCACATTCATGATATGTTACTTTTCTGAGTTTCTGGTTGTGAGATATCTTGTTCTTTTTCAAATTTGTTCCTTTTGGCAGGAGTGCTTTTATGAAAAAGATTACC</genome_strand>
        <mrna_strand>CTTCTTCTTTCGGGGTTTTAGCAGGGTTTTAGACAAAGTGCCTAAATCCGCCTGTTCTTTTTCAATTAGTTCTTGTCAAGAAAGAATAATTCTTACAGAAATTGTAGAGCAATGGCATCGGATACATTAACTTACACGGACTCGATGAACTTTAAGGTGAGGGAACTGTTGAAGGAGGTTCAGTTCGAATGCTCGCCGGAAACCACTGCAACTGTGGACAATGTTGTTTCTGGCATAAAATAAGCAATTGATAAGATCCCCGAGGACCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAGGCTAACTTGGCGCCGGGGTTTGTTAGAGATATCAATGCGGATAAGGTGGAGTTCACATTTAAGAAGCCAAAATCTTTGGAAATTGGCGGGAGTTATTCTATACATTGTGTTACCAAACGCGATCTAAATGTTGATCTTTTTCTTCACTTGCCAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGCTTTTATGAAAAAGATTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U573389" ref_strand="+" ref_description="SGN-U573389 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157348130|emb|CAO22840.1| (e_value=9e-73) unnamed; (*ATH) AT1G63810.1 (e_value=8e-66)  Symbol: None | nucleolar RNA-associated family protein / Nrap family protein, contains Pfam profile PF03813: Nrap protein; similar to nucleolar RNA-associated protein alpha (GI:18539461) (Mus musculus) | chr1:23673215-23679223 REVERSE | Aliases: T12... ; (*SWP) sp|Q8R5K4|NOL6_MOUSE (e_value=8e-26) Nucleolar protein 6 OS=Mus musculus GN=Nol6; ">
      <seq>cccctcacacactctagggggtcctttaagacgctggacacccctgcatttcttcttagagttgctgaaagtctgcagaacaattgggggatgatgtttacagctacagaagatgatgtagatgttctaatgtctggctatgcattccgccttaaaatttctcatgaaagggctcttggtctggtgactgggcaaagtaataacagtcgacatcaatggagcctctctgctgacagaaaacttcttctgcaacaccaacatgcgagcaagatcaatgctttaaggggtcgttatcctatatatggaccaatagttcggctagctaaaagatgggtctctgcacatctattatccacggtgctgacagaggaggcagttgaactattggtttcaaatcttttcttgagacctttgccatttgaacctcctttctcccgaataacaggatttttgaggttcttacgattattatcggaatatgattgggccttttctcccttaatcgttgattttgatggtgacttttcaactgaggagaaaaataaaattaatgagaatttcatgagaagtagagaagagcatgaaaaggacacacagaaatcaagtcctgccatgtttttagctactaaatatgacgttgcatctgaagcttggacaagatcctcaccaactacagcagagctaagacgactggtggctttttcaactagcagtgcgaatttgttgaccaaactgatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="133392" stop="138332"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133693" g_stop="133719" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="71" r_length="27" r_score="0.926"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="133720" i_stop="133803" i_length="84">
            <donor d_prob="0.820" d_score="0.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="133804" g_stop="133928" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="196" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="133929" i_stop="134065" i_length="137">
            <donor d_prob="0.921" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="134066" g_stop="134186" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="317" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="134187" i_stop="134258" i_length="72">
            <donor d_prob="0.537" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="134259" g_stop="134396" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="455" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="134397" i_stop="136119" i_length="1723">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="136120" g_stop="136216" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="552" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="136217" i_stop="136329" i_length="113">
            <donor d_prob="0.375" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="136330" g_stop="136455" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="553" r_stop="678" r_length="126" r_score="0.992"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="136456" i_stop="137971" i_length="1516">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.901" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="137972" g_stop="138032" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="679" r_stop="739" r_length="61" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U573389" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U573389" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133693" e_stop="133719"/>
          <exon e_start="133804" e_stop="133928"/>
          <exon e_start="134066" e_stop="134186"/>
          <exon e_start="134259" e_stop="134396"/>
          <exon e_start="136120" e_stop="136216"/>
          <exon e_start="136330" e_stop="136455"/>
          <exon e_start="137972" e_stop="138032"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCATTTCTTCTTAGAATTGCTGAGAGGTGGTCTTTCTTGAGTTTATTTTTTATGGAACAATACTTTGTGTAAGCCAACATTTAACTCATTTGAGTGCACCATTCTGGCAGTCTGCAGAACAATTGGGGGATGATGTTTACAGCTACAGAAGATGATGTAGATGTTCTAATGTCTGGCTATGCATTCCGCCTTAAAATTTCTCATGAAAGGGCTCTTGGTCTGGTGACTGGGCAAAGTAAGACAGTTTGTGCCTGTATTCTTTACTCAAATAGAAAATTTCCCTATTGTTATGGAACTTTTTATCTAATATGTAAAAGACAGCCTGTAGTGACCTACTTCTGTGTATTGATTATGGATGATTTTTTTCCACAGGTAATAACAGTCGACATCAATGGAGCCTCTCTGCTGACAGAAAACTTCTTCTGCAACACCAACATGCGAGCAAGATCAATGCTTTAAGGGGTCGTTATCCTATATATGGACCAATAGTTCGGTAAGGACATGAGTTCATACTCCATGCCCGTTTTCATCCTCCTTATAGCTCATTTACGTCTTTGCTTTGCAGGCTAGCTAAAAGATGGGTCTCTGCACATCTATTATCCACGGTGCTGACAGAGGAGGCAGTTGAACTATTGGTTTCAAATCTTTTCTTGAGACCTTTGCCATTTGAACCTCCTTTCTCCCGAATAACAGGATTTTTGAGGTTTAATATCTGTCACTCAGCATTCAATTTTACTCAATTATATTACCGGTTACTTTCTCTTCCCCACTTCTTCACACTCAAATACTATTTGGTTAAAAGTTAACTATCAAGAACAAAAGAATTACAATTTGGTTGCTTGGAACACACATGTGCTCTTCCGAAAACCTAATAAGTTCCTGCAAAATTGTGGGCGACTGTCATGCGTGCATCAAATAGTGTTCACTTTCTGTTGTTGTTTCAAAATTATCTTTGCTCTTTCACATTTATGATGGACCTCTTTTTTATTTTCCCTTGTGTATGTTTGTATGTGTCACTTGCAACTTATACTTCTTTCACAACACAGTAGAATGTTGTGACCTTGAATGGAACAGCTAACTTTTTGTGCATTTGATGCTATCTGTTTGAGGGTAAGAATGTGGTGGGTCTTCAGGTAATGTAATTATGTGCATGATTTATAGGGAAGGAGGTGGAGGGCTAAAAAATGTGCATATGTGTAGAGCCATGGTTGGCTGTGGTGCTGATTGTTAGCAGATTTTCTTTTATGAAATAGGCAATGGCTCTTGGCAGTTAAATAGTAGTAGGCTCTAATTGCCACTAATATAGTAACTTCAATTGATCTTTAATTATGATTTTACATGGTCTTAGCATTAATATGTCCTAATCATATGATCAGTTGATGTATTTGGTCAAATTCCTGGTGTCATTGCAAGTTGTTTGAGCCCCATGGCATATTCGGTCGGCCAGCCGTGGCACTTATCTGGCTTATTATTGATGATTGTACTGTTTTGATCCCCATAATCATGGCCAATTGCTATTCATTTCTGTTTTATGTTGCCTATTGCCTCCTGTTCTTCACTATTACTTCTTTTATTACCAAGGTCACTTTCAAAGCTTCAAATATAACAGCTATGCCAATTCAAGTTTTACAGTAATGGTAGGAATACTATGAACCACTAACCCCCGAATTTTTTTCATTCCTAAAACTTCACTTCTTGCGATCTTTTTCATTTACAATCCCAAGTTTGATTGAAGAACACTGTGAGAGAATATTTATCATATTATTTATTGGGGTTGAGTGTGGTGCAAAAGCTACTTCTAAGTTCTAATTGCTTATGAATATATGACTCTACAATATGAGAAGCTTCAAGCCACTTCCGCTGTCCGTGAAACTTTAACTTGATGCAGACTGAGAAAGAATTGTTGAAGGTGCAGATCAGTTTTGTATTTAAAAGTTCCAATATGATATTGGGGCTTGAAGCTAATTATAAAAAGTAAAGGACTCAACTTAAATAAGAAGTTTGCTTGTACCTTTATAAATTTATCAGTTCTACATGACAGCTTGTGCATCTATATCAAAGAGCAGCAGATTCCTCAAAAGAACAGAAAATCTAGGGTGGAAGTGCAGTACTTCTCCCTGGTAGTTATACCCGTGTAGGCTAGAAGATCTACATAAGACAAAAGTTACTGACGTCTGTAATCACGTCAAAACATACTCGTGAGCAGTCAATTGATATAGTGTCCTGCAAACCAACGTTTGAGCTCTAATAGCTGTGTTCTTTTTTCATGCTTGTTTTTTCCCCTTTTAAATTCCCCCGTCCTTTTATGTTCTTTGTTGTTTTTGAGGTAAGAAATGGATGAAATCTGAAATGGTGCTTTCGGTTTCAAATTTAGTTATAAACTCTGTTAGTTGGTCACTTTTTCTTATATTCTGTATCTTAAACAGGTTCTTACGATTATTATCGGAATATGATTGGGCCTTTTCTCCCTTAATCGTTGATTTTGATGGTGACTTTTCAACTGAGGAGAAAAATAAAATTAATGTAAGTACCAAGCCAAATGATCCATCTTTGGAGGGTGTTCCATGCTCTTATCTTGTTTTTCCATGTATATTTTTTTATAATTCAGAATACTATTTGCATATGAAATTTGACAGGAGAATTTCATGAGAAGTAGAGAAGAGCATGAAAAGGACACACAGAAATCAAGTCCTGCAATGTTTTTAGCTACTAAATATGACGTTGCATCTGAAGCTTGGACAAGATCCTCACCAACTACAGCAGTAAGTGTTCCTCAATGATTGAACACTTGTATTAAATCTTCTCCTGTATTTTATGGAATCTTGTTCACCTAAGCATATTCTTATGCTTTTACAGAATTAAGGGGTTGTTTGGTAGAGAGTATAAAAATAATGCTCAATAGAGTGTATTAGTAATGCTAGCAATAGTTTTACTTGCATTGGTTATGCATAGATTATTTCTTATGCATTGTTTGGTTTGGTGTGTTAAAAGTGGTATGCATTGTATAAAAATCTATGTTTACAAGAGTATCCTTCACAATTATGATGGAAAAAATGTAAAAAGTGCTTTTTGAGGGGTAATTGAGTCATTATTAAATTTTTTGCATTGCTAATACCTAGAAATTCATGGTATTAGTAATACACTCCTCAATAGTCAATACACAATAGAGTGTGTAACTAATGCTTACATTAGTTATATATAGCATGAAAAAATGCTCAAACAAGGGCCTACTAATACACATTAGCTAATGCATGCATTATTTTTGCTATTACATTCTACCAAATGACCCCTAAGTGAAGAAACATAGTGTTTTGCTTCCTAATGTATATATATTGCACCCAAATAGTTAGCACATGTTTAGAAAACACTGTAGATTAGATGTCAACTTAAGACCATTGTCCCTAGAATGTATGACCAAGGTTTCATTTGTAGAAAAGTGGCCTCTGGAGAGGCTCATGTTAATCTTAGTTTCCATCTGCAGACTACTTTTTGCAGCTGCCTTACTACCATATACATACTCACAACAAAAGTAATTCTTAATTACTATATGCAAACCACATGCTTTGTCAATATTGTTTGTGGTTGAATCATTTAGGAGAAAGGAGAAGTATTTCATATGATGGTAACCATGATCTGTCCTGTACATATTTGGACCAGTGATGTTACAACTTCACACTTTGGCTAAACATGTGCATAGGATGCTTATCAAACATATATACAACACAAAATTACACCAGATCCACGTTTCCACTTCTTGTGCATCCTTTTCTCTTTTATATTCCTAGATTAAGAAAAGTAGCTAGAAGTAATTCTCTTAAGAATTTTTTTTTTTTATGGTAAACCTGTTGTCAAACCCACCAAGGAGCTCCATATTGATCCTATTCCTCCTTATCTCTCTTGTTGGCTCGATTCCTCAACCTTATGGTTGGAGGTGGAGGGTTCTTACCATTAGGTTATCCCTCGCATCTCAAAGTCTTCATAAAGTCAATCGGGGAAGTTTAGCTTGGGACATGACTACCGAAAAGGATAAATATTGTTGTCTTATGGATAATGAGATATCACAATATGAAGAAATCAAACAATAAGATAAAGCATTTAAACCTTCTATGGAACCAGGGCCTGTAGTGTAACACAATCTGTGCATGTATACTAGTTTTTAGGAAATATTGTCGTTCATGGTCTTGAGAACAAACTCCTCTCATGATTGTTTTGTTGATAAGTTTTCACGATTGTCATGGCTTTTTTTCTGGCATTAATGTGGGTACCGATGTGTACTAGGAGCTAAGACGACTGGTGGCTTATTCAACTAGCAGTGCGAATTTGTTGACCAAACTGATTA</genome_strand>
        <mrna_strand>TGCATTTCTTCTTAGAGTTGCTGAAAG....................................................................................TCTGCAGAACAATTGGGGGATGATGTTTACAGCTACAGAAGATGATGTAGATGTTCTAATGTCTGGCTATGCATTCCGCCTTAAAATTTCTCATGAAAGGGCTCTTGGTCTGGTGACTGGGCAAA.........................................................................................................................................GTAATAACAGTCGACATCAATGGAGCCTCTCTGCTGACAGAAAACTTCTTCTGCAACACCAACATGCGAGCAAGATCAATGCTTTAAGGGGTCGTTATCCTATATATGGACCAATAGTTCG........................................................................GCTAGCTAAAAGATGGGTCTCTGCACATCTATTATCCACGGTGCTGACAGAGGAGGCAGTTGAACTATTGGTTTCAAATCTTTTCTTGAGACCTTTGCCATTTGAACCTCCTTTCTCCCGAATAACAGGATTTTTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTACGATTATTATCGGAATATGATTGGGCCTTTTCTCCCTTAATCGTTGATTTTGATGGTGACTTTTCAACTGAGGAGAAAAATAAAATTAAT.................................................................................................................GAGAATTTCATGAGAAGTAGAGAAGAGCATGAAAAGGACACACAGAAATCAAGTCCTGCCATGTTTTTAGCTACTAAATATGACGTTGCATCTGAAGCTTGGACAAGATCCTCACCAACTACAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTAAGACGACTGGTGGCTTTTTCAACTAGCAGTGCGAATTTGTTGACCAAACTGATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U603556" ref_strand="+" ref_description="SGN-U603556 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157348130|emb|CAO22840.1| (e_value=3e-36) unnamed; (*ATH) AT1G63810.1 (e_value=2e-33)  Symbol: None | nucleolar RNA-associated family protein / Nrap family protein, contains Pfam profile PF03813: Nrap protein; similar to nucleolar RNA-associated protein alpha (GI:18539461) (Mus musculus) | chr1:23673215-23679223 REVERSE | Aliases: T12... ; ">
      <seq>ggataaattgccctacccccagcatcttctctttccatccgaacttgaacaagagcgatgtgtggtgcgtgggcatgcatccaagattttccatcctttcttttctcctcgagacttcaaagtgaactctggggaactgaaaagtaagctgatggtgaattttgatccagtaaggtgctttattgccgatatcgagaaaggatttcccgatgtggtcaaggtttggtacgatgctgtgggtggtgatgctcttggtcttacactaggaaaagcaagttcacagaaacggaagcatgatgactccgcggaggagagcacagatcttttgaatacgctaaaaaccataggcgaggttgggaaaggccttgtgagaagtattcatgttgtcaaggcccgaaaggcgtgataattgaaatgttcaaaagaatgtacactatgggtattgttatcaaggttaccggccggtagggagctcttcaaattttgcagcacaacttttgtacatgtgtagtctcttgtcgaagagccaacaatcacttgtatttgtaattgtattgagaaattcattttataattcgagaaaaagaagaaaaaagagaactgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="137905" stop="139469"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138204" g_stop="138256" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="53" r_length="53" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="138257" i_stop="138396" i_length="140">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="138397" g_stop="138539" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="54" r_stop="196" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="138540" i_stop="138688" i_length="149">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="138689" g_stop="138775" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="283" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="138776" i_stop="138848" i_length="73">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="138849" g_stop="139169" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="284" r_stop="604" r_length="321" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U603556" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U603556" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="138204" e_stop="138256"/>
          <exon e_start="138397" e_stop="138539"/>
          <exon e_start="138689" e_stop="138775"/>
          <exon e_start="138849" e_stop="139169"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATAAATTGCCCTACCCCCAGCATCTTCTCTTTCCATCCGAACTTGAACAAGGTTCTTTTTCTCATCTTACTTTGTAATTGCATTTGTTTCCACATGATATCTACCTCTATTTCCTCCCCCATTTTCACCCATTAAGCATTGAAACTCCTGTACTAATTAAGAGTCTGAAACACTTCCATTTTTTTTTCTAGAGCGATGTGTGGTGCGTGGGCATGCATCCAAGATTTTCCATCCTTTCTTTTCTCCTCGAGACTTCAAAGTGAACTCTGGGGAACTGAAAAGTAAGCTGATGGTGAATTTTGATCCAGTAAGGTGCTTTATTGCCGATATCGAGGCAAGTACTTACATTTGCTGATATTTTTTCCACTGAGGTGCTAGTCAGTTATTCAATCCCTTGAATCCCATCGTTCCTGTGATTCTGAGGATCACCCATTTCTTCTTGCCCATATGTGACCCATTTCTTCTTGCCCATATGTGATGCAGAAAGGATTTCCCGATGTGGTCAAGGTTTGGTACGATGCTGTGGGTGGTGATGCTCTTGGTCTTACACTAGGAAAAGCAAGTTCACAGGTATGCTTTCTAGTTGTATTGAAGTAACAATGATGGTTTAGTAACAAGATTGTAATTGTGGTCTGTTCTCCAGAAACGGAAGCATGATGACTCCGCGGAGGAGAGCACAGATCTTTTGAATACGCTAAAAACCATAGGCGAGGTTGGGAAAGGCCTTGTGAGAAGTATTCATGTTGTCAAGGCCCGAAAGGCGTGATAATTGAAATGTTCAAAAGAATGTACACTATGGGTATTGTTATCAAGGTTACCGGCCGGTAGGGAGCTCTTCAAATTTTGCAGCACAACTTTTGTACATGTGTAGTCTCTTGTCGAAGAGCCAACAATCACTTGTATTTGTAATTGTATTGAGAAATTCATTTTATAATTCGAGAAAAAGAAGAAAAAAGAGAACTGC</genome_strand>
        <mrna_strand>GGATAAATTGCCCTACCCCCAGCATCTTCTCTTTCCATCCGAACTTGAACAAG............................................................................................................................................AGCGATGTGTGGTGCGTGGGCATGCATCCAAGATTTTCCATCCTTTCTTTTCTCCTCGAGACTTCAAAGTGAACTCTGGGGAACTGAAAAGTAAGCTGATGGTGAATTTTGATCCAGTAAGGTGCTTTATTGCCGATATCGAG.....................................................................................................................................................AAAGGATTTCCCGATGTGGTCAAGGTTTGGTACGATGCTGTGGGTGGTGATGCTCTTGGTCTTACACTAGGAAAAGCAAGTTCACAG.........................................................................AAACGGAAGCATGATGACTCCGCGGAGGAGAGCACAGATCTTTTGAATACGCTAAAAACCATAGGCGAGGTTGGGAAAGGCCTTGTGAGAAGTATTCATGTTGTCAAGGCCCGAAAGGCGTGATAATTGAAATGTTCAAAAGAATGTACACTATGGGTATTGTTATCAAGGTTACCGGCCGGTAGGGAGCTCTTCAAATTTTGCAGCACAACTTTTGTACATGTGTAGTCTCTTGTCGAAGAGCCAACAATCACTTGTATTTGTAATTGTATTGAGAAATTCATTTTATAATTCGAGAAAAAGAAGAAAAAAGAGAACTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U571784" ref_strand="+" ref_description="SGN-U571784 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157348138|emb|CAO22848.1| (e_value=2e-70) unnamed; (*ATH) AT4G36630.1 (e_value=2e-70) | Symbol: EMB2754 | expressed protein | chr4:17271832-17276621 REVERSE | Aliases: AP22.59, AP22_59, EMB2754, EMBRYO DEFECTIVE 2754; (*SWP) sp|Q8R5L3|VPS39_MOUSE (e_value=2e-13) Vam6/Vps39-like protein OS=Mus musculus GN=Vps39; ">
      <seq>gcgggacaaagcattaacatgctaataatacgcatgtagattgtggaacagagaggttattttgacatgctacccaaatcaatcagggaagaagaaagatggtgcacactgcctacgataccttccaactcctcaataattctccctccaaaatcgatgccattgaatcataccgctcaaatttgctcatcgcatgttccgatggatcgctccgtgtttacgttccagaatcctcagtttccgatcaatctgatttccattccgaaaccttagggcttcatcaaggaccatatgtgcttgaaagaactctgaatggattctccagaagacaaatgctggccatggaagtcctcgtctcacgagaacttctgctttccctctccgagtcaattgcgttacatcgattgcctgatttggagactttatcagtgattactaaggctaaaggtgcaaatgtatattcgtgggatgataaacgagggttactttgcttcggcaggcaaaaaagagtctgtatttacaaacacgacggggggagtggatttgtggaggtgaaagaatttggagtacctgacacagttaagtcgatgtcatggtgtggtgagaatatttgcttggggattagaagagagtacaagatattgaataccactaatggtgtattgtctgaggtgttctcttcaggnaggatcgccgcacctcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="140095" stop="141972"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="140395" g_stop="140925" g_length="531"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="531" r_length="531" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="140926" i_stop="141498" i_length="573">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="141499" g_stop="141672" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="705" r_length="174" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U571784" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571784" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="140395" e_stop="140925"/>
          <exon e_start="141499" e_stop="141672"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGGGACAAAGCATTAACATGCTAATAATACGCATGTAGATTGTGGAACAGAGAGGTTATTTTGACATGCTACCCAAATCAATCAGGGAAGAAGAAAGATGGTGCACACTGCCTACGATACCTTCCAACTCCTCAATAATTCTCCCTCCAAAATCGATGCCATTGAATCATACCGCTCAAATTTGCTCATCGCATGTTCCGATGGATCGCTCCGTGTTTACGTTCCAGAATCCTCAGTTTCCGATCAATCTGATTTCCATTCCGAAACCTTAGGGCTTCATCAAGGACCATATGTGCTTGAAAGAACTCTGAATGGATTCTCCAGAAGACAAATGCTGGCCATGGAAGTCCTCGTCTCACGAGAACTTCTGCTTTCCCTCTCCGAGTCAATTGCGTTACATCGATTGCCTGATTTGGAGACTTTATCAGTGATTACTAAGGCTAAAGGTGCAAATGTATATTCGTGGGATGATAAACGAGGGTTACTTTGCTTCGGCAGGCAAAAAAGAGTCTGTATTTACAAACACGACGGTAATGACTTGAATGTAATTTAATTGTTGTATTGTTAATTGAAAATTTTATATTATTGTCACGGCAATGCGGTTTCGTGCATGTGTACTAGATCAGTCTCTGCCATATGTGAAAGGAAAAAGGAACTACTTTTCTCTATGGGCTGATCAATCATTTAATGATGTTACAAACATAATGTAGAACTGTGCTTTCCCACTATCAAGTGGACGTAGAGATATTATATATGTTATAATAATCGCTGGAAAGATTGTTTGATGTAAAAAACATAAGATAATGCCCAAAATAATTGAATAATTTAATGATTTGAATTTTTGGAAGTTGTATAGAAACAGAATGGTTCAAACATTTTGTGACATCCGAAAATAGCCGAGTGTTACATAAATTGGGACAGGGGAGTATAGTTTTTGGTTCACTACATTTAGTTTAACACAAGTATCATAAAGGCCTGTAATTTCTTTTTCCTTTGATTATCAGGTTTGTTGCCTAAAGCAGTTTGGATACTGATGATCGTATTTGTCTAATGATATAAGAACTCTATTGCTGTAACCTGATTTTTATTTGGAACTTCTATAGGGGGGAGTGGATTTGTGGAGGTGAAAGAATTTGGAGTACCTGACACAGTTAAGTCGATGTCATGGTGTGGTGAGAATATTTGCTTGGGGATTAGAAGAGAGTACAAGATATTGAATACCACTAATGGTGTATTGTCTGAGGTGTTCTCTTCAGGGAGGATCGCCGCACCTCTTG</genome_strand>
        <mrna_strand>GCGGGACAAAGCATTAACATGCTAATAATACGCATGTAGATTGTGGAACAGAGAGGTTATTTTGACATGCTACCCAAATCAATCAGGGAAGAAGAAAGATGGTGCACACTGCCTACGATACCTTCCAACTCCTCAATAATTCTCCCTCCAAAATCGATGCCATTGAATCATACCGCTCAAATTTGCTCATCGCATGTTCCGATGGATCGCTCCGTGTTTACGTTCCAGAATCCTCAGTTTCCGATCAATCTGATTTCCATTCCGAAACCTTAGGGCTTCATCAAGGACCATATGTGCTTGAAAGAACTCTGAATGGATTCTCCAGAAGACAAATGCTGGCCATGGAAGTCCTCGTCTCACGAGAACTTCTGCTTTCCCTCTCCGAGTCAATTGCGTTACATCGATTGCCTGATTTGGAGACTTTATCAGTGATTACTAAGGCTAAAGGTGCAAATGTATATTCGTGGGATGATAAACGAGGGTTACTTTGCTTCGGCAGGCAAAAAAGAGTCTGTATTTACAAACACGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGGAGTGGATTTGTGGAGGTGAAAGAATTTGGAGTACCTGACACAGTTAAGTCGATGTCATGGTGTGGTGAGAATATTTGCTTGGGGATTAGAAGAGAGTACAAGATATTGAATACCACTAATGGTGTATTGTCTGAGGTGTTCTCTTCAGGNAGGATCGCCGCACCTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U580079" ref_strand="+" ref_description="SGN-U580079 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>gtggaagtcccaagctcaaaccactgggccaccccgaagttataatatatccatagaatctatatcctcaaagttttcttcattgcatataaaagagcaaatgtagcacattgtccaaatttttatgctgcctcatctctttgaatattatgtggtttgactaggagtgcaaactaagaaatttgtttgaattgtatatcacattcatgtggtggaaaagatcaagttaaatattggagttcatgtgaacggctggtttgattggaaaatataagactgcgatataattagactcgaaagtttaatttgggaagtcatccaaagtgaactgtgtaatatatgtcagatgggtgtatattctagtaccagtgtaatttgtctttatgatttaccgtaactgaagtgccctcagtcaataaatatcggtgtttagctgaggtgatggatattggagattgaagaatgttagtgatcaaaacagtatgtagaaccttgtactttaaggtttggaatgtagactcttggattactattatggatcctaggcccatctactgttcaactcaagtaccaccatctttagccttcatcttgtagaactcactacgatcccaggtggccccatagagccgagttctgatgcctaagtgagtgttgaccaaaaatttctaggtgttgaccaaggtagaagaaagattgacacaaccttagcaccaaaagctagctatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="143269" stop="144597"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="143568" g_stop="144297" g_length="730"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="729" r_length="729" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U580079" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U580079" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="143568" e_stop="144297"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGATGTCCCAAGCTCAAACCACTGGGCCACCCCGAAGTTATAATATATCCATAGAATCTATATCCTCAAAGTTTTCTTCATTGTATATAAAAGAGCAAATGTAGCACATTGTCCAAATTCTTATGCTGCCTCATCTCTTTGAATATTATGTGGTTTGACTAGGAGTGCAAACTAAGAAATTTGTTTGAATTGTATATCACATTCATGTGGTGAAAAAGATCAAGTTAAATATTGGAGTTCATGTGAACGGCTGGTTTGATTGGAAAATATAAGACTGCAATATAGTTTAGACTCGAAAGTTTAATTTGGGAAGTCATCCAAAGTGAACTGTGTAATATACGTCAGATGGGGGTGTATTCTAGTACCAGTGTATTTTGTCTTTATGATTTACCGTAACTGAAGTGCCCTCAGTCAATAAATATCGGTGTTTAGCTGAGGTGATGGATATTGGAGATTGAAGAATGTTAGTGATCAAAACAGTATGTTGAACCTTGTACTTTAAGGTTTGGAATGTAGACTCTTGGATTACTATTATGGATCCTAGGCCCATCTACTGTTCAACTCAAGTACCACCATCTTTAGCCTTCAACTTGTAGAACTCACTACGATTCCAGGTGGCCCCATAGAGCCGAGTTCTGATGCCTAAGTGAGTGTTGACCAAAAACTTCTAGGTGTTGACCAAGGTAGAAGAAAGATTGACACAACCTTAGCACCAAAAGCTAGCTATT</genome_strand>
        <mrna_strand>GTGGAAGTCCCAAGCTCAAACCACTGGGCCACCCCGAAGTTATAATATATCCATAGAATCTATATCCTCAAAGTTTTCTTCATTGCATATAAAAGAGCAAATGTAGCACATTGTCCAAATTTTTATGCTGCCTCATCTCTTTGAATATTATGTGGTTTGACTAGGAGTGCAAACTAAGAAATTTGTTTGAATTGTATATCACATTCATGTGGTGGAAAAGATCAAGTTAAATATTGGAGTTCATGTGAACGGCTGGTTTGATTGGAAAATATAAGACTGCGATATA-ATTAGACTCGAAAGTTTAATTTGGGAAGTCATCCAAAGTGAACTGTGTAATATATGTCAGATGGGTGTATATTCTAGTACCAGTGTAATTTGTCTTTATGATTTACCGTAACTGAAGTGCCCTCAGTCAATAAATATCGGTGTTTAGCTGAGGTGATGGATATTGGAGATTGAAGAATGTTAGTGATCAAAACAGTATGTAGAACCTTGTACTTTAAGGTTTGGAATGTAGACTCTTGGATTACTATTATGGATCCTAGGCCCATCTACTGTTCAACTCAAGTACCACCATCTTTAGCCTTCATCTTGTAGAACTCACTACGATCCCAGGTGGCCCCATAGAGCCGAGTTCTGATGCCTAAGTGAGTGTTGACCAAAAATTTCTAGGTGTTGACCAAGGTAGAAGAAAGATTGACACAACCTTAGCACCAAAAGCTAGCTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U599354" ref_strand="+" ref_description="SGN-U599354 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157348138|emb|CAO22848.1| (e_value=2e-101) unnamed; (*ATH) AT4G36630.1 (e_value=5e-94) | Symbol: EMB2754 | expressed protein | chr4:17271832-17276621 REVERSE | Aliases: AP22.59, AP22_59, EMB2754, EMBRYO DEFECTIVE 2754; ">
      <seq>ccgttgaagcaacaatgctgtcattgttgctcttgataattccgtttttggatttttccctgttcctctcggtgcacagattgtacaactaacagcctctggaaactttgaggaggccttggctttgtgcaaattgctaccaccagaagattcaagtcttagatctgcaaaggagcaatcaattcatataagatatgcacacttcctgtttgaaaatgggagctatgaagaagcaatggaacattttctggcatctcaagttgaactcacttatgtgcttgccttatatccatccattattgttccaaaatcatctttcatacctgaaccacagaaatttgtggaagttggggatgcaccgtatctctcccgagcttcctctggtctgtcagatgatctggattctacgccttcacatgtcttagaatctgatgaaatggatatagaatccaaaaaaatgagtcacaacactttgatggctctgattaagtatttacagaagagaagatacagtgttgttgagaaagccacaactgagggcacttaagaggtcgtttcagatgctgtcggagataatttcatttcttatggaactagccggtccaaaaaaccaaccaagggcagaattcatgctccaatcacttccatcgctagggatatggctgcaatactggacactgcacttcttcaagctcttatattaactggacagttctcagcagctacagattttctgaaagtcctcaactactgtgatgtgaaaatatgtgaggagttcctgcaaaaaaaaagccagtatgcttgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="144632" stop="147803"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="144935" g_stop="145047" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="192" r_length="113" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="145048" i_stop="146353" i_length="1306">
            <donor d_prob="0.618" d_score="0.92"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="146354" g_stop="146780" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="619" r_length="427" r_score="0.909"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="146781" i_stop="147316" i_length="536">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="147317" g_stop="147503" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="620" r_stop="806" r_length="187" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U599354" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="0.902" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U599354" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="144935" e_stop="145047"/>
          <exon e_start="146354" e_stop="146780"/>
          <exon e_start="147317" e_stop="147503"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGTACAACTAACAGCATCTGGAAACTTTGAGGAGGCCTTGGCTTTGTGCAAATTGCTACCACCAGAAGATTCCAGTCTTAGATCTTCAAAGGAGCAGTCAATTCATATGAGGTGATTGCCCCCTTCCCTTGTCCCCACCGCCCCTCTTCTGCACTAACTTTGTGCTAAGTTGTAAGTCAATAGCAACAGCATCTCACTTAGATCATTTTCAGCACCTTCTTGTTTATATAATTATATTAATGAAAGTTAATTTTTACCTGAACCAAACAAAAATATATCTCATTGAAGTCATGGTTACATTGAACCTCCTGCCTGGGGTGGGGGGTGGGTGCGTGATTTAACCAAATATTATGTGTTAACGTTGCAGTTCAATGGCAATAGTCTCCTGTTATGTCAAATCTATTGAAATTGCATCTTTTAGTATATGATGTTATGGTGTATACGTGTTTATATCTAGCACAAGTTATAAATTGATATGGGTCCATTTCGAGGCTGATATCAATGTAGCTGTGAAGTCTTAATTTAAAACTTTTAGATCAAGAATCGGCCAAAAATTTGTGGAAACATCTGTAGTTGATATTCTTTATAACTAGGGATTTGTTCTTTCTTCTAGAGTGCTTTTGAAATCCTCAACTCGGAAAGTTTTGGCTTGTTAATGGCTTTGATAATGTGGGTTCTAACAAAGTATGTCACATATCTTGATAAAGATTAGATTATATAGAGGCTATATGGAAATTAATTCTTGTAGAAAACTTGGAAACATCTTTGATAAAATGTAGGCTTCAACCAAAATGTGAAATTATTGATAATGTACATTTATTTCTTTGGATAGGAACAATGTATAGGGTATTAGCACCATAAACTTATTTGAGGTGTTATGTTTGCTTAAAGTTTTACTTCATCCAGTGTAGTACGCATGAGTAGTAAGACTGACAGCATACTGGCTTGACCAGGAAACTGTCCTGGCTCGATTTTCTAGTCAGTTTCTTTTTCCCAGGAAAGATGAAATAAGAACAACACCCAAGGGTGAGGCCTAGAGGCTAATGTAATTGAAAAGGCCCTGGGAGACCAGGGCTAGAATTTCAGCAAAGGCGAAAAAATATAGGTGATTACTTCTAATCCTGCTATACCTTGGTGGGCAGGGTCAACCAGTACGTGTGCTTGTGGGAGGTAGAAGGTAACACGGATTATTCGAGGTTTGAACAATCTGTCATTTACACCATTGTTGTGGGAAAAAATTGAAATATGAACATTGCTTGGCAAGAAGTTACTAAATACAACTTGGTTCTTCTCTTTTATTGTTCTTTCCATTTTTTGTAGTTTTAGCTCATATAGTTTGTTTTTTTTTGGGAAAGAAGGAATGAAACGAAATGTGAAACTAATATACATGAAGATTGATAATAAATCTTTGATTCAGATATGCGCACTTTCTATTTGAAAATGGGAGCTATGAAGAAGCAATGGAACATTTTCTGGCATCTCAAGTTGAAATCACTTATGTGCTCGCCTTATATCCATCCATTATTGTTCCAAAATCATCTTGCATACCTGAACCACAGAAATTTGCAGATGTTGCAGATGCACCATATCTCTCCCGAGGCTCTTCTGGTCTGTCAGATGATCTAGATTCTCCGTCTTCGGATGTATTTGAATCTGATGAAATGGATATAGAGTCCAAGAAAATGAGCCACAACACTTTGATGGCTCTGATTAAGTATTTGCAGAAAAAGAGATACAGTGTCATTGAGAAAGCAACAACTGAGGGAACTGAAGAAGTGGTTTCAGATGCTGTTGGAGATAATTTCATTTCTTATGGAACTGACCGGTCCAAAAAACCAACCAAGGTAACTTTTCAATGTGTCTTGTGCCTTCCATAAACAGCTTTTCGGGGAAATCTTTTTTGTTGAATAAGTTCTCAATTGGAAGTCAAAGTTTTGACATTAAGCATATCTCTTCTTGATAACTGTGACTAGCAATGTATTTAGTATTTTCAGCAAAGCTTTCTAGAAATCCCAAAGATATGCAGTTGGCAGCGCGCATTATATTGAGCTGTTTAACATGTACCTTTCTTTGCATCAAAGCATAAATACCTTTCTGGCTGCATGTGTTTGATCATTTATGAATTTGATGGATTATTCAAGTCATCGATCATTTATAGCCTTCTGAAAAATACTGTTTCATTTGTATCTTCCAAAAGTCTGATGTCAGGTAGGTAAGTTCTGATTCTTCCATATGCAAAAGTACTGGCTTATTCTAGTGAGCCTACTGAAGGGAGAAACCACTTACGCCTCAAAGAGCTGTTAGTACTTGGATAATTTCTACTTAGCTGTATTACTTGCCTAATTTAAATCTAAAATGTGTTTTTCTTTGATCCATTTAGGGCAGAATTCATATTCCTATCACTTCCATCGCTAGGGACATGGCTGCAATACTGGACACTGCACTTCTTCAAGCTCTGTTTTTAACTGGACAGTCCTCTGCTGCTACAAATTTTCTGAAAGTCCTCAACTACTGTGATGTGAAAATATGCGATGCGTTCCTGCAAGAGAGAAGCCAGTATGCTTGTC</genome_strand>
        <mrna_strand>ATTGTACAACTAACAGCCTCTGGAAACTTTGAGGAGGCCTTGGCTTTGTGCAAATTGCTACCACCAGAAGATTCAAGTCTTAGATCTGCAAAGGAGCAATCAATTCATATAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGCACACTTCCTGTTTGAAAATGGGAGCTATGAAGAAGCAATGGAACATTTTCTGGCATCTCAAGTTGAACTCACTTATGTGCTTGCCTTATATCCATCCATTATTGTTCCAAAATCATCTTTCATACCTGAACCACAGAAATTTGTGGAAGTTGGGGATGCACCGTATCTCTCCCGAGCTTCCTCTGGTCTGTCAGATGATCTGGATTCTACGCCTTCACATGTCTTAGAATCTGATGAAATGGATATAGAATCCAAAAAAATGAGTCACAACACTTTGATGGCTCTGATTAAGTATTTACAGAAGAGAAGATACAGTGTTGTTGAGAAAGCCACAACTGAGGGCACTTAAGAGGTCGTTTCAGATGCTGTCGGAGATAATTTCATTTCTTATGGAACTAGCCGGTCCAAAAAACCAACCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAATTCATGCTCCAATCACTTCCATCGCTAGGGATATGGCTGCAATACTGGACACTGCACTTCTTCAAGCTCTTATATTAACTGGACAGTTCTCAGCAGCTACAGATTTTCTGAAAGTCCTCAACTACTGTGATGTGAAAATATGTGAGGAGTTCCTGCAAAAAAAAAGCCAGTATGCTTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U574826" ref_strand="+" ref_description="SGN-U574826 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|147790107|emb|CAN61039.1| (e_value=1e-117) hypothetical; (*ATH) AT4G36630.1 (e_value=4e-101) | Symbol: EMB2754 | expressed protein | chr4:17271832-17276621 REVERSE | Aliases: AP22.59, AP22_59, EMB2754, EMBRYO DEFECTIVE 2754; (*SWP) sp|Q8R5L3|VPS39_MOUSE (e_value=7e-17) Vam6/Vps39-like protein OS=Mus musculus GN=Vps39; ">
      <seq>atgcttagcacagggaatgaatctctctttaagtattttatggaacaatgcttcgccaaaacagttatctgattattttttcttttttgggcagcccctttgtgcaactgaccccatgcttgtcctggagttctcattgcctgttcttgaaagctgtccgatgcaaaccattgagctatttttgtctggtaacattccagcagacttggtgaattcttacttaaagcagcatgctccagacatgcaggcaacatatctagaactcatgcttgccatgaatgaaaatagtatctcagggaatctgcagaatgaaatggtgcaaatttatctctcagaagtgcttgattttcatgctgaacataattcacagcaaaagtgggatgagaaaacatgtcctccaccaaggaaaaagctactgtctgctttggagggtatgtctggatataatccagaggtgttgctgaagagacttccaccagatgctctgtatgaagaacgtgcaattctgttggggaaaatgaataaacatgaacttgccctatctatttatgtgcacaagcttcatgctcccgaacttgcactgtcctattgtgaccgggtgtacgagtcaggacttcaacaacattcagcaaaatcttacggaaacatttacctgactctactgcaaatctatctaaatcccaggaagacaacaaaaaattttgagaagaaaattactaatctggtatcatctcagagccctgggattccaaaagttggttcaggaactccagcaaaggtaaaaggaggccgcttcaagaaaattgctgaaattgagggcgctgaggacactcgattcagtccaagtggcactgacagtggtaggagcgatggagatacagaaaatgctgccgaggaaagagattctactattatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="147565" stop="150034"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="147865" g_stop="148180" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="316" r_length="316" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="148181" i_stop="148638" i_length="458">
            <donor d_prob="0.076" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="148639" g_stop="148881" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="559" r_length="243" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="148882" i_stop="149376" i_length="495">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="149377" g_stop="149734" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="560" r_stop="917" r_length="358" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U574826" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>917</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U574826" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="147865" e_stop="148180"/>
          <exon e_start="148639" e_stop="148881"/>
          <exon e_start="149377" e_stop="149734"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCTTAGCACAGGGAATGAATCTCTCTTTAAGTATTTTATGGAACAATGCTTCGCCAAAACAGTTATCTGATTATTTTTTCTTTTTTGGGCAGCCCCTTTGTGCAACTGACCCCATGCTTGTCCTGGAGTTCTCATTGCCTGTTCTTGAAAGCTGTCCGATGCAAACCATTGAGCTATTTTTGTCTGGTAACATTCCAGCAGACTTGGTGAATTCTTACTTAAAGCAGCATGCTCCAGACATGCAGGCAACATATCTAGAACTCATGCTTGCCATGAATGAAAATAGTATCTCAGGGAATCTGCAGAATGAAATGGTAGAGGCACTTGTCCATCTGTCTGGTTTTATGTAGCTTCTCTCTGTCTTTCCCCTTTTGTACCTTTTATTTCATAAAAACCATTAAAGCAACATTGCTTCAAGTGAAGCCAGAAAGCTGAGGCTTATAGTTCTCCTCGTGATATGGGCATATGTCTAATGAAGCTCACATGTTTAGGCTTCTTTGAACTCAAATCTTTGAGAAACCCTGAGTGACAAAATTTAGGAACAATTATCTTGCCTCCTACTGTTTCTCAGGGATAAAGATTTTGCTCGGACTCTTCAAAATGGGTGCGTGTTGGATCCTCCAAAAGTAGTGTATTTTTGGAGGATCGAACACAGTTGGAGTAACATTTTTGGAGAGTCCGCTCAACAGTCTTTTGTGCTTCAATCCATGCGTCTGACAAAATGTTGAGTGTTTATGTGATTATGATAAATTCGCTTAGCAACTTGTGGCAGGTGCAAATTTATCTCTCAGAAGTGCTTGATTTTCATGCTGAACATAATTCACAGCAAAAGTGGGATGAGAAAACATGTCCTCCACCAAGGAAAAAGCTACTGTCTGCTTTGGAGGGTATGTCTGGATATACTCCAGAGGTGTTGCTGAAGAGACTTCCACCAGATGCTCTGTATGAAGAACGTGCAATTCTTTTGGGGAAAATGAATAAACATGAACTTGCCCTGTCTATTTATGTGCACAAGGTATTTTTCCACCTTAACTGCACATGATATTTTAGGATTGGCTTTTATCTAATGCATTGGTGCTTTCGAGGGTATTTAAGGTATGCAAAAATCTAAAACTGTGCAAGTTCTCCATCATAAGCATTATAACAGACTTATATTGTGAACTTCACATTTGCTGTTAGATCGGTTGACTAATGTAGCAGTCATCTCAATAGTGCAATCATTTCACTCTTCTTTTAGTTAGTGTACCTGTTCGTCAGACATGTTAACCTTCTCATAGTTTAATTACATCATTGGATTTTGCATCGACCCTTTCTTTCTCTGTATGTTGTTGGGCTAGTATGCATTCCCAAGTCGGGATATTGGATATGTAATCTTTTTGTCATTAATACATGTCTAATTTTATGAATTTGATGGACATTGAAGTCTTTTCAGTTGTCTCTGTGTTGCATTTTATAAGCTTAAATTGTGGGTTTTTTCATACTGAATTGAATTTCTCTCTTTGATTTGTAGCTTCATGCTCCCGAACTTGCACTGTCCTATTGTGACCGGGTGTACGATTCAGGACTTCAACAACATTCAGCAAAATCTTACGGAAACATTTACCTGACTCTACTGCAAATCTATCTAAATCCTAGGAAGACAACAAAAAAATTTGAGAAGAAAATTACTAATCTGGTATCAGCTCAGAGCCCTAGGATTCCAAAAGTTGGTTTAGGAACTACAGGAAAGGTAAAAGGAGGCCGCTCCAAGAAAATTGCTGAAATTGGGGGCGCTGAGGACACTCGATTCAGTCTAAGCGGCACAGACAGTGGTAGGAGTGATGGAGATACAGAAGATGCTGCCGAGGAAGGTGGTTCTACTATTATGC</genome_strand>
        <mrna_strand>ATGCTTAGCACAGGGAATGAATCTCTCTTTAAGTATTTTATGGAACAATGCTTCGCCAAAACAGTTATCTGATTATTTTTTCTTTTTTGGGCAGCCCCTTTGTGCAACTGACCCCATGCTTGTCCTGGAGTTCTCATTGCCTGTTCTTGAAAGCTGTCCGATGCAAACCATTGAGCTATTTTTGTCTGGTAACATTCCAGCAGACTTGGTGAATTCTTACTTAAAGCAGCATGCTCCAGACATGCAGGCAACATATCTAGAACTCATGCTTGCCATGAATGAAAATAGTATCTCAGGGAATCTGCAGAATGAAATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAAATTTATCTCTCAGAAGTGCTTGATTTTCATGCTGAACATAATTCACAGCAAAAGTGGGATGAGAAAACATGTCCTCCACCAAGGAAAAAGCTACTGTCTGCTTTGGAGGGTATGTCTGGATATAATCCAGAGGTGTTGCTGAAGAGACTTCCACCAGATGCTCTGTATGAAGAACGTGCAATTCTGTTGGGGAAAATGAATAAACATGAACTTGCCCTATCTATTTATGTGCACAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCATGCTCCCGAACTTGCACTGTCCTATTGTGACCGGGTGTACGAGTCAGGACTTCAACAACATTCAGCAAAATCTTACGGAAACATTTACCTGACTCTACTGCAAATCTATCTAAATCCCAGGAAGACAACAAAAAATTTTGAGAAGAAAATTACTAATCTGGTATCATCTCAGAGCCCTGGGATTCCAAAAGTTGGTTCAGGAACTCCAGCAAAGGTAAAAGGAGGCCGCTTCAAGAAAATTGCTGAAATTGAGGGCGCTGAGGACACTCGATTCAGTCCAAGTGGCACTGACAGTGGTAGGAGCGATGGAGATACAGAAAATGCTGCCGAGGAAAGAGATTCTACTATTATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U574825" ref_strand="+" ref_description="SGN-U574825 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157348138|emb|CAO22848.1| (e_value=1e-30) unnamed; (*ATH) AT4G36630.1 (e_value=5e-28) | Symbol: EMB2754 | expressed protein | chr4:17271832-17276621 REVERSE | Aliases: AP22.59, AP22_59, EMB2754, EMBRYO DEFECTIVE 2754; ">
      <seq>ccatgaatgtctctttaagtattttatggaacaatgcttcgccaaaacagttatctgattattttttcttttttgggcagcccctttgtgcaactgaccccatgcttgtcctggagttctcattgcctgttcttgaaagctgtccgatgcaaaccattgagctatttttgtctggtaacattccagcagacttggtgaattcttacttaaagcagcatgctccagacatgcaggcaacatatctagaactcatgcttgccatgaatgaaaatagtatctcagggaatctgcagaatgaaatggtagaggcacttgtccatctgtctggttttatgtagcttctctctgtctttccccttttgtaccttttatttcataaaaaccattaaagcaacattgcttcaagtgaagccagaaagctgaggcttatagttctcctcgtgatatgggcatatgtctaatgaagctcacatgtttaggcttctttgaactcaaatctttgaaaaaccctgagtgacaaaatttaggaacaattatcttgcctcctactgtttctcagggataaagattttgctcggactcttcaaaatgggtgcgtgttggatcctccaaaagtagtgtatttttggaggatcgaacacagtcggagtaacatttttggagagtccgctcaacagtcttttgtgcttcaatccatgcgtctgacaaaatgttgagtgtttatgtgattatgataaattcgcttagcaacttgtggcaggtgcaaatttatctctcagaagtgcttgattttcatgctgaacataattcacagcaaaagtgggatgagaaaacatgtccctccaccaaggaaaaagctactgtctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="+" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="147581" stop="149044"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="147879" g_stop="148744" g_length="866"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="867" r_length="867" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="+" ref_id="SGN-U574825" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>866</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U574825" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="147879" e_stop="148744"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATGAATCTCTCTTTAAGTATTTTATGGAACAATGCTTCGCCAAAACAGTTATCTGATTATTTTTTCTTTTTTGGGCAGCCCCTTTGTGCAACTGACCCCATGCTTGTCCTGGAGTTCTCATTGCCTGTTCTTGAAAGCTGTCCGATGCAAACCATTGAGCTATTTTTGTCTGGTAACATTCCAGCAGACTTGGTGAATTCTTACTTAAAGCAGCATGCTCCAGACATGCAGGCAACATATCTAGAACTCATGCTTGCCATGAATGAAAATAGTATCTCAGGGAATCTGCAGAATGAAATGGTAGAGGCACTTGTCCATCTGTCTGGTTTTATGTAGCTTCTCTCTGTCTTTCCCCTTTTGTACCTTTTATTTCATAAAAACCATTAAAGCAACATTGCTTCAAGTGAAGCCAGAAAGCTGAGGCTTATAGTTCTCCTCGTGATATGGGCATATGTCTAATGAAGCTCACATGTTTAGGCTTCTTTGAACTCAAATCTTTGAGAAACCCTGAGTGACAAAATTTAGGAACAATTATCTTGCCTCCTACTGTTTCTCAGGGATAAAGATTTTGCTCGGACTCTTCAAAATGGGTGCGTGTTGGATCCTCCAAAAGTAGTGTATTTTTGGAGGATCGAACACAGTTGGAGTAACATTTTTGGAGAGTCCGCTCAACAGTCTTTTGTGCTTCAATCCATGCGTCTGACAAAATGTTGAGTGTTTATGTGATTATGATAAATTCGCTTAGCAACTTGTGGCAGGTGCAAATTTATCTCTCAGAAGTGCTTGATTTTCATGCTGAACATAATTCACAGCAAAAGTGGGATGAGAAAACATGT-CCTCCACCAAGGAAAAAGCTACTGTCTG</genome_strand>
        <mrna_strand>CCATGAATGTCTCTTTAAGTATTTTATGGAACAATGCTTCGCCAAAACAGTTATCTGATTATTTTTTCTTTTTTGGGCAGCCCCTTTGTGCAACTGACCCCATGCTTGTCCTGGAGTTCTCATTGCCTGTTCTTGAAAGCTGTCCGATGCAAACCATTGAGCTATTTTTGTCTGGTAACATTCCAGCAGACTTGGTGAATTCTTACTTAAAGCAGCATGCTCCAGACATGCAGGCAACATATCTAGAACTCATGCTTGCCATGAATGAAAATAGTATCTCAGGGAATCTGCAGAATGAAATGGTAGAGGCACTTGTCCATCTGTCTGGTTTTATGTAGCTTCTCTCTGTCTTTCCCCTTTTGTACCTTTTATTTCATAAAAACCATTAAAGCAACATTGCTTCAAGTGAAGCCAGAAAGCTGAGGCTTATAGTTCTCCTCGTGATATGGGCATATGTCTAATGAAGCTCACATGTTTAGGCTTCTTTGAACTCAAATCTTTGAAAAACCCTGAGTGACAAAATTTAGGAACAATTATCTTGCCTCCTACTGTTTCTCAGGGATAAAGATTTTGCTCGGACTCTTCAAAATGGGTGCGTGTTGGATCCTCCAAAAGTAGTGTATTTTTGGAGGATCGAACACAGTCGGAGTAACATTTTTGGAGAGTCCGCTCAACAGTCTTTTGTGCTTCAATCCATGCGTCTGACAAAATGTTGAGTGTTTATGTGATTATGATAAATTCGCTTAGCAACTTGTGGCAGGTGCAAATTTATCTCTCAGAAGTGCTTGATTTTCATGCTGAACATAATTCACAGCAAAAGTGGGATGAGAAAACATGTCCCTCCACCAAGGAAAAAGCTACTGTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U588804" ref_strand="+" ref_description="SGN-U588804 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>acaatcaacaaagaaagttgtgtattattgcattttaattgaacattcacaaccttgagttgtaacaaaactctactcaaaattaagttataaaccacctcaagttaagagctctcatccattttaatacagaaaaattacacaacatcaaatcaattgcattcgcttccacgttggacataatctgcaaaaaaatgtttataacatgttccttcatgaggagcactgtcattctccggttgcatacttgtaccattagcaacccgttgcagcccttgtgaattgagagcagaagtgtcttactttcaggataaatgacagcttaaaactgagttgcagaacatgttaaatggggctagcatgaagaaatgggatcaataccaccaatagcaacccaaaacattcagtttattcccaaatccaacttctcattatcatcttttcctcaactgagagcctcttccaactgccttcata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="-" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="152203" stop="151128"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="151903" g_stop="151428" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="477" r_length="477" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="-" ref_id="SGN-U588804" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588804" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="151903" e_stop="151428"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAATCAACAAAGAAAGTTGTGTATTATTGCATTTTAATTGAACATTCACAACCTTGAGTTGTAACAAAACTCTACTCAAAATTAAGTTATAAA-CACCTCAAGTTAAGAGCTCTCATCCATTTTAATACAGAAAAAATACACAACATCAAATCAATTGTATTCGCTTCTACATTGGCCATAATCTGCAAAAAAAATGTGTATAACTTGTTACTTCTTGAGGAGCACTGTCATTCTAGGCTTGCACACTTGTACCATTTGCAACCCATTGCAGCCCTTGTGACTTGAGAGCAGAAGTGTCTTACTTTCAGGATAAATGGCAACTTAAAACTGAGCTGCAGAACATGTTAAATGGTGCTAGCATGAAGAAATGGGATCAATGCCACCAATAGCAACCCAAAACATTCAG-TTAATCCCAAATCCAACTTCTCATTATCATCTTTTCCTCAACTGAGAGCCTCTTCCAACTGCCTTCATA</genome_strand>
        <mrna_strand>ACAATCAACAAAGAAAGTTGTGTATTATTGCATTTTAATTGAACATTCACAACCTTGAGTTGTAACAAAACTCTACTCAAAATTAAGTTATAAACCACCTCAAGTTAAGAGCTCTCATCCATTTTAATACAGAAAAATTACACAACATCAAATCAATTGCATTCGCTTCCACGTTGGACATAATCTGC-AAAAAAATGTTTATAACATGTTCCTTCATGAGGAGCACTGTCATTCTCCGGTTGCATACTTGTACCATTAGCAACCCGTTGCAGCCCTTGTGAATTGAGAGCAGAAGTGTCTTACTTTCAGGATAAATGACAGCTTAAAACTGAGTTGCAGAACATGTTAAATGGGGCTAGCATGAAGAAATGGGATCAATACCACCAATAGCAACCCAAAACATTCAGTTTATTCCCAAATCCAACTTCTCATTATCATCTTTTCCTCAACTGAGAGCCTCTTCCAACTGCCTTCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U574014" ref_strand="+" ref_description="SGN-U574014 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>tcaccgggaaaagatagccactatagtcaatcaaggctagatgttggtgggatgtcagtctgaatcttattgtcatgtcatgtataacaatggggatggggttagcccaacaaagaagtaaaaaactactgtatttgctttacgtggaaatacaatcaacaaagaaagttgtgtattattgcatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="-" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="152354" stop="151568"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="152054" g_stop="151868" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="187" r_length="187" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="-" ref_id="SGN-U574014" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>187</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U574014" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="152054" e_stop="151868"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACCGGGAAAAGATAGCCACTATAGTCAATCAAGGCTAGATGTTGGTGGGATGTCAGTCTGAATCTTATTGTCATGTCATGTATAACAATGGGGATGGGGTTAGCCCAACAAAGAAGTAAAAAACTACTGTATTTGCTTTACGTGGAAATACAATCAACAAAGAAAGTTGTGTATTATTGCATTTT</genome_strand>
        <mrna_strand>TCACCGGGAAAAGATAGCCACTATAGTCAATCAAGGCTAGATGTTGGTGGGATGTCAGTCTGAATCTTATTGTCATGTCATGTATAACAATGGGGATGGGGTTAGCCCAACAAAGAAGTAAAAAACTACTGTATTTGCTTTACGTGGAAATACAATCAACAAAGAAAGTTGTGTATTATTGCATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U591505" ref_strand="+" ref_description="SGN-U591505 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|15240506|ref|NP_199767.1| (e_value=2e-51) expressed protein [Arabidopsis thaliana]; (*ATH) AT5G49560.1 (e_value=1e-53) | Symbol: None | expressed protein, similar to SP:P40389 Rapid response to glucose protein 1 {Schizosaccharomyces pombe} | chr5:20128187-20129011 REVERSE | Aliases: K6M13.11, K6M13_11; ">
      <seq>caattgtcgaaatcaaaggagacattgacacggacgacctcaatccgttcactatgattctcccacaagatggccatgacaatgacgcctctccgcagcagcaaaaacagcaactccatttcctccaatccattaactcaaacgtagtcatcagacaacttccatctgaaggcctttctttccaactctggcctgccgctactattctcgtcactctccttgataacactcgtaacggcgaatcaactccgttttccgatttgttcaaacgtcaggaaaaaggggtttcgctaccccttcgtattctcgaactgggttcaggaacaggtgttgttgggatagctgctgctgctattcttggtgctaaggttactgtcactgaccttcctcatgtgctgcctaatatacagttcaatgttgatgcaaactcacaagttttggaacaacagagtgggggtgttgatgttgcggcgcttagctggggggataaccagcatatggaggctgttggtagagattatgacctgattttgggatctgatgtggtgtaccatgatcacctctatgatcctctgattaacacgttgaggttcttcctgttaggaggtggaaagaagatagcttttgttatggctcatttgagaagatggaagaaggaatctgctttcttcaagagagccaagaagctttttgatgtccaaatcatacataccgagcctccgcccgatgggtctagggatttgggggtggttgtatacccttttcaccggggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="-" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="153113" stop="151744"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="152813" g_stop="152043" g_length="771"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="775" r_length="775" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="-" ref_id="SGN-U591505" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>771</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U591505" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="152813" e_stop="152043"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTGTCGAAATCAAAGGAGACATTGACACGGACGACCTCAATCCGTTCACTATGATTCTCCCACAAGATGGCCATGACAATGACGCCTCTCCGCAGCAGCAAAAACAGCAACTCCATTTCCTCCAATCCATTAACTCAAACGTAGTCATCAGACAACTTCCATCTGAAGGCCTTTCTTTCCAACTCTGGCCTGCCGCTACTATTCTCGTCACTCTCCTTGATAACACTCGTAACGGCGAATCAACTCCGTTTTCCGATTTGTTCAAACGTCAGGAAAAAGGGGTTTCGCTACCCCTTCGTATTCTCGAACTGGGTTCAGGAACAGGTGTTGTTGGGATAGCTGCTGCTGCTATTCTTGGTGCTAAGGTTACTGTCACTGACCTTCCTCATGTGCTGCCTAATATACAGTTCAATGTTGATGCAAACTCACAAGTTTTGGAACAACAGAGTGGGGGTGTTGATGTTGCGGCGCTTAGCTGGGGGGATAACCAGCATATGGAGGCTGTTGGTAGAGATTATGACCTGATTTTGGGATCTGATGTGGTGTACCATGATCACCTCTATGATCCTCTGATTAACACGTTGAGGTTCTTCCTGTTAGGAGGTGGAAAGAAGATAGCTTTTGTTATGGCTCATTTGAGAAGATGGAAGAAGGAATCTGCTTTCTTCAAGAGAGCCAAGAAGCTTTTTGATGTCCAAATCATACATACCGAGCCTCCGCCCGATGGGTCTA-GGA-TT-GGGGTGGTTGTATA-CCTTTTCACCGGGAAAA</genome_strand>
        <mrna_strand>CAATTGTCGAAATCAAAGGAGACATTGACACGGACGACCTCAATCCGTTCACTATGATTCTCCCACAAGATGGCCATGACAATGACGCCTCTCCGCAGCAGCAAAAACAGCAACTCCATTTCCTCCAATCCATTAACTCAAACGTAGTCATCAGACAACTTCCATCTGAAGGCCTTTCTTTCCAACTCTGGCCTGCCGCTACTATTCTCGTCACTCTCCTTGATAACACTCGTAACGGCGAATCAACTCCGTTTTCCGATTTGTTCAAACGTCAGGAAAAAGGGGTTTCGCTACCCCTTCGTATTCTCGAACTGGGTTCAGGAACAGGTGTTGTTGGGATAGCTGCTGCTGCTATTCTTGGTGCTAAGGTTACTGTCACTGACCTTCCTCATGTGCTGCCTAATATACAGTTCAATGTTGATGCAAACTCACAAGTTTTGGAACAACAGAGTGGGGGTGTTGATGTTGCGGCGCTTAGCTGGGGGGATAACCAGCATATGGAGGCTGTTGGTAGAGATTATGACCTGATTTTGGGATCTGATGTGGTGTACCATGATCACCTCTATGATCCTCTGATTAACACGTTGAGGTTCTTCCTGTTAGGAGGTGGAAAGAAGATAGCTTTTGTTATGGCTCATTTGAGAAGATGGAAGAAGGAATCTGCTTTCTTCAAGAGAGCCAAGAAGCTTTTTGATGTCCAAATCATACATACCGAGCCTCCGCCCGATGGGTCTAGGGATTTGGGGGTGGTTGTATACCCTTTTCACCGGGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U577230" ref_strand="+" ref_description="SGN-U577230 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|15240506|ref|NP_199767.1| (e_value=6e-31) expressed protein [Arabidopsis thaliana]; (*ATH) AT5G49560.1 (e_value=5e-33) | Symbol: None | expressed protein, similar to SP:P40389 Rapid response to glucose protein 1 {Schizosaccharomyces pombe} | chr5:20128187-20129011 REVERSE | Aliases: K6M13.11, K6M13_11; ">
      <seq>aattgattgataattatttaaacaaaaaaatcaatccttttggttttaaattcgttattaccatctggcgtccttcaaattctttggcaacttgaccattttatattctatatttatggtaatactactttaccatttatattaccaaaaaaaaataaaaaataaaaatttgttgttagggcaagactccgcagactgggtcggataaacccctcaagaaccccggaatcgccgccgcctgtcacatgacttctccaattgtcgaaatcaaaggagacattgacacggacgacctcaatccgttcactatgattctcccacaagatggccatgacaatgacgcctctccgcagcagcaaaaacagcaactccatttcctccaatccattaactcaaacgtagtcatcagacaacttccatctgaaggcctttctttccaactctggcctgccgctactattctcgtcactctccttgataacactcgtaacggcgaatcaactccgttttccgatttgttcaaacgtcaggaaaaaggggtttcgctaccccttcgtattctcgaactgggttcaggaacaggtgttgttgggatagctgctgctgctattcttggtgctaaggttactgtcactgaccttcctcatgtgctgcctaatatacagttcaatgttgatgcaaactcacaagttttggaacaacagagtgggggtgttgatgttgcggcgcttagctggggggataaccagcatatggaggctgttggtagagattatgacctgattttgggatctgatgtggtgtaccatgatcacctctatgatcctctgattaacacgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0215M12-7r9rr/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0215M12.2" temp_strand="-" temp_description="C02HBa0215M12.2  AC215426.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0215M12 sequenced_by:kribb upload_account_name:korea">
        <position start="153368" stop="151927"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="153068" g_stop="152227" g_length="842"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="842" r_length="842" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0215M12.2" gen_strand="-" ref_id="SGN-U577230" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>842</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0215M12.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U577230" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="153068" e_stop="152227"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGATTGATAATTATTTAAACAAAAAAATCAATCCTTTTGGTTTTAAATTCGTTATTACCATCTGGCGTCCTTCAAATTCTTTGGCAACTTGACCATTTTATATTCTATATTTATGGTAATACTACTTTACCATTTATATTACCAAAAAAAAATAAAAAATAAAAATTTGTTGTTAGGGCAAGACTCCGCAGACTGGGTCGGATAAACCCCTCAAGAACCCCGGAATCGCCGCCGCCTGTCACATGACTTCTCCAATTGTCGAAATCAAAGGAGACATTGACACGGACGACCTCAATCCGTTCACTATGATTCTCCCACAAGATGGCCATGACAATGACGCCTCTCCGCAGCAGCAAAAACAGCAACTCCATTTCCTCCAATCCATTAACTCAAACGTAGTCATCAGACAACTTCCATCTGAAGGCCTTTCTTTCCAACTCTGGCCTGCCGCTACTATTCTCGTCACTCTCCTTGATAACACTCGTAACGGCGAATCAACTCCGTTTTCCGATTTGTTCAAACGTCAGGAAAAAGGGGTTTCGCTACCCCTTCGTATTCTCGAACTGGGTTCAGGAACAGGTGTTGTTGGGATAGCTGCTGCTGCTATTCTTGGTGCTAAGGTTACTGTCACTGACCTTCCTCATGTGCTGCCTAATATACAGTTCAATGTTGATGCAAACTCACAAGTTTTGGAACAACAGAGTGGGGGTGTTGATGTTGCGGCGCTTAGCTGGGGGGATAACCAGCATATGGAGGCTGTTGGTAGAGATTATGACCTGATTTTGGGATCTGATGTGGTGTACCATGATCACCTCTATGATCCTCTGATTAACACGTTG</genome_strand>
        <mrna_strand>AATTGATTGATAATTATTTAAACAAAAAAATCAATCCTTTTGGTTTTAAATTCGTTATTACCATCTGGCGTCCTTCAAATTCTTTGGCAACTTGACCATTTTATATTCTATATTTATGGTAATACTACTTTACCATTTATATTACCAAAAAAAAATAAAAAATAAAAATTTGTTGTTAGGGCAAGACTCCGCAGACTGGGTCGGATAAACCCCTCAAGAACCCCGGAATCGCCGCCGCCTGTCACATGACTTCTCCAATTGTCGAAATCAAAGGAGACATTGACACGGACGACCTCAATCCGTTCACTATGATTCTCCCACAAGATGGCCATGACAATGACGCCTCTCCGCAGCAGCAAAAACAGCAACTCCATTTCCTCCAATCCATTAACTCAAACGTAGTCATCAGACAACTTCCATCTGAAGGCCTTTCTTTCCAACTCTGGCCTGCCGCTACTATTCTCGTCACTCTCCTTGATAACACTCGTAACGGCGAATCAACTCCGTTTTCCGATTTGTTCAAACGTCAGGAAAAAGGGGTTTCGCTACCCCTTCGTATTCTCGAACTGGGTTCAGGAACAGGTGTTGTTGGGATAGCTGCTGCTGCTATTCTTGGTGCTAAGGTTACTGTCACTGACCTTCCTCATGTGCTGCCTAATATACAGTTCAATGTTGATGCAAACTCACAAGTTTTGGAACAACAGAGTGGGGGTGTTGATGTTGCGGCGCTTAGCTGGGGGGATAACCAGCATATGGAGGCTGTTGGTAGAGATTATGACCTGATTTTGGGATCTGATGTGGTGTACCATGATCACCTCTATGATCCTCTGATTAACACGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>47</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="967" PGL_stop="4968"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="967" e_stop="1137"/>
            <exon e_start="1914" e_stop="2028"/>
            <exon e_start="2115" e_stop="2194"/>
            <exon e_start="2914" e_stop="2989"/>
            <exon e_start="3070" e_stop="3134"/>
            <exon e_start="3249" e_stop="3311"/>
            <exon e_start="4787" e_stop="4868"/>
            <exon e_start="4943" e_stop="4968"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="0.988"/>
          <exon-intron don_prob="0.768" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.606" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.950" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.866" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="0.719" acc_prob="0.943" e_score="0.976"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="967" e_stop="1137" e_length="171"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="1138" i_stop="1913" i_length="776"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="1914" e_stop="2028" e_length="115"/>
          </exon>
          <intron i_serial="2" don_prob="0.768" acc_prob="0.985">
            <gDNA_intron_boundary i_start="2029" i_stop="2114" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="2115" e_stop="2194" e_length="80"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="2195" i_stop="2913" i_length="719"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="2914" e_stop="2989" e_length="76"/>
          </exon>
          <intron i_serial="4" don_prob="0.606" acc_prob="0.998">
            <gDNA_intron_boundary i_start="2990" i_stop="3069" i_length="80"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="3070" e_stop="3134" e_length="65"/>
          </exon>
          <intron i_serial="5" don_prob="0.950" acc_prob="0.996">
            <gDNA_intron_boundary i_start="3135" i_stop="3248" i_length="114"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="3249" e_stop="3311" e_length="63"/>
          </exon>
          <intron i_serial="6" don_prob="0.866" acc_prob="0.962">
            <gDNA_intron_boundary i_start="3312" i_stop="4786" i_length="1475"/>
          </intron>
          <exon e_serial="7" e_score="0.976">
            <gDNA_exon_boundary e_start="4787" e_stop="4868" e_length="82"/>
          </exon>
          <intron i_serial="7" don_prob="0.719" acc_prob="0.943">
            <gDNA_intron_boundary i_start="4869" i_stop="4942" i_length="74"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="4943" e_stop="4968" e_length="26"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="967" stop="1137"/>
              <exon start="1914" stop="2028"/>
              <exon start="2115" stop="2194"/>
              <exon start="2914" stop="2989"/>
              <exon start="3070" stop="3134"/>
              <exon start="3249" stop="3311"/>
              <exon start="4787" stop="4868"/>
              <exon start="4943" stop="4968"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574992" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCAATCGTCCGATTAACGTAACTCCACTTCTTGTGGCGGCGATTCGCATCTAGCAAAAACCCTAGTCGGCTTCAATGGGAGACTTCAACGATGCCTTCATGCGGAACAACCCTAACGTTCAGGCCCGTGCAAAGGCCCAGAATCGCGCTAATGTCATGCAACTCAAGCTG : ATTGGTCAAAGTCATCCAACTGGGTTGACTGCTAATCTTCTGAAGTTGTTTGAGCCCCGACCACCTTTGGAGTACAAACCACCCCCTGAGAAGAGAAAATGCCCTTCATATACTG : GGATGGCACAATTTGTTAGTAACTTCGCTCAACCTGGTGATCCAGAATATGCTCCACCAATCCCTGAGGTTGAAACCCCG : ACTGAACGAAGAGCTAGGATCCACAAGATACGGCTGGAGGAGGGTGCTAAAAAGGCTGCTGAGGAGCTTGAAAAAT : ATGATCCTAGCAGCGACCCAAATGCTACCGGGGATCCATACAAGACACTATTTGTTGCAAGACTT : AATTATGAGACAACAGAAAGCAGAGTCAAACGCGAATTTGAGGCTTATGGTCCAATCAAGCGG : GTTCGCTTGGTTATGGACAAGACAAACAATAAACCCAGGGGTTATGCTTTCATTGAGTATGTGCATACACGGGATATGAAAG : CTGCGTATAAACAAGCTGATGGAAAG</gDNA_template>
            <first_frame> S  N  R  P  I  N  V  T  P  L  L  V  A  A  I  R  I  *  Q  K  P  *  S  A  S  M  G  D  F  N  D  A  F  M  R  N  N  P  N  V  Q  A  R  A  K  A  Q  N  R  A  N  V  M  Q  L  K  L  :  I  G  Q  S  H  P  T  G  L  T  A  N  L  L  K  L  F  E  P  R  P  P  L  E  Y  K  P  P  P  E  K  R  K  C  P  S  Y  T   : G  M  A  Q  F  V  S  N  F  A  Q  P  G  D  P  E  Y  A  P  P  I  P  E  V  E  T  P  :  T  E  R  R  A  R  I  H  K  I  R  L  E  E  G  A  K  K  A  A  E  E  L  E  K   : Y  D  P  S  S  D  P  N  A  T  G  D  P  Y  K  T  L  F  V  A  R  L  :  N  Y  E  T  T  E  S  R  V  K  R  E  F  E  A  Y  G  P  I  K  R  :  V  R  L  V  M  D  K  T  N  N  K  P  R  G  Y  A  F  I  E  Y  V  H  T  R  D  M  K   : A  A  Y  K  Q  A  D  G  K </first_frame>
            <second_frame>  P  I  V  R  L  T  *  L  H  F  L  W  R  R  F  A  S  S  K  N  P  S  R  L  Q  W  E  T  S  T  M  P  S  C  G  T  T  L  T  F  R  P  V  Q  R  P  R  I  A  L  M  S  C  N  S  S  * :   L  V  K  V  I  Q  L  G  *  L  L  I  F  *  S  C  L  S  P  D  H  L  W  S  T  N  H  P  L  R  R  E  N  A  L  H  I  L  :  G  W  H  N  L  L  V  T  S  L  N  L  V  I  Q  N  M  L  H  Q  S  L  R  L  K  P  R :   L  N  E  E  L  G  S  T  R  Y  G  W  R  R  V  L  K  R  L  L  R  S  L  K  N  :  M  I  L  A  A  T  Q  M  L  P  G  I  H  T  R  H  Y  L  L  Q  D  L :   I  M  R  Q  Q  K  A  E  S  N  A  N  L  R  L  M  V  Q  S  S  G :   F  A  W  L  W  T  R  Q  T  I  N  P  G  V  M  L  S  L  S  M  C  I  H  G  I  *  K  :  L  R  I  N  K  L  M  E   </second_frame>
            <third_frame>   Q  S  S  D  *  R  N  S  T  S  C  G  G  D  S  H  L  A  K  T  L  V  G  F  N  G  R  L  Q  R  C  L  H  A  E  Q  P  *  R  S  G  P  C  K  G  P  E  S  R  *  C  H  A  T  Q  A   : D  W  S  K  S  S  N  W  V  D  C  *  S  S  E  V  V  *  A  P  T  T  F  G  V  Q  T  T  P  *  E  E  K  M  P  F  I  Y  W :   D  G  T  I  C  *  *  L  R  S  T  W  *  S  R  I  C  S  T  N  P  *  G  *  N  P   : D  *  T  K  S  *  D  P  Q  D  T  A  G  G  G  C  *  K  G  C  *  G  A  *  K  I :   *  S  *  Q  R  P  K  C  Y  R  G  S  I  Q  D  T  I  C  C  K  T   : *  L  *  D  N  R  K  Q  S  Q  T  R  I  *  G  L  W  S  N  Q  A   : G  S  L  G  Y  G  Q  D  K  Q  *  T  Q  G  L  C  F  H  *  V  C  A  Y  T  G  Y  E  S :   C  V  *  T  S  *  W  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="1033" stop="1137"/>
                    <exon start="1914" stop="2028"/>
                    <exon start="2115" stop="2194"/>
                    <exon start="2914" stop="2989"/>
                    <exon start="3070" stop="3134"/>
                    <exon start="3249" stop="3311"/>
                    <exon start="4787" stop="4868"/>
                    <exon start="4943" stop="4968"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>612</number_coding_nucleotides>
                  <number_encoded_amino_acids>204</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SASMGDFNDAFMRNNPNVQARAKAQNRANVMQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKRKCPSYTGMAQFVSNFAQPGDPEYAPPIPEVETPTERRARIHKIRLEEGAKKAAEELEKYDPSSDPNATGDPYKTLFVARLNYETTESRVKREFEAYGPIKRVRLVMDKTNNKPRGYAFIEYVHTRDMKAAYKQADGK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="5008" PGL_stop="6388"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5008" e_stop="5090"/>
            <exon e_start="5535" e_stop="5603"/>
            <exon e_start="5788" e_stop="5960"/>
            <exon e_start="6096" e_stop="6388"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.937" acc_prob="0.993" e_score="0.940"/>
          <exon-intron don_prob="0.995" acc_prob="0.986" e_score="0.986"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.940">
            <gDNA_exon_boundary e_start="5008" e_stop="5090" e_length="83"/>
          </exon>
          <intron i_serial="1" don_prob="0.937" acc_prob="0.993">
            <gDNA_intron_boundary i_start="5091" i_stop="5534" i_length="444"/>
          </intron>
          <exon e_serial="2" e_score="0.986">
            <gDNA_exon_boundary e_start="5535" e_stop="5603" e_length="69"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.986">
            <gDNA_intron_boundary i_start="5604" i_stop="5787" i_length="184"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="5788" e_stop="5960" e_length="173"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="5961" i_stop="6095" i_length="135"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="6096" e_stop="6388" e_length="293"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5008" stop="5090"/>
              <exon start="5535" stop="5603"/>
              <exon start="5788" stop="5960"/>
              <exon start="6096" stop="6388"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582681" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGTAGAACAGTCCCCAATTGGCGTCCCCGCAGACTTGGTGGTGGACTTGGAACAACAAGAGTTGGAAATGAAGATGCTACTAG : AGAGGTGGTTCAGCCTGGAAGGGCAGCATCTCGCTCTGAGGAGCCAAGAGCACGAGATGACAGGGATAG : GGATCGGGAGAAGTCCCGTGAAAGGGTGCGAGATAAGGACAGAGAGAAATCTCGTGAGCGTTCTCATGACAGGCCAAGGGAACGTGAAAGAGATGACAAACATCATAGGGAACGCGAGAGAACCAGAGAAAGAGAAAAAGATCGTGGTCGTGACCGTGATCGAGACCGCGAAC : GTGATAGAGAATATGATTATGAGCATGTTGATTCAAAACACGAGCGAGACCGACACGGTGACAAAGAGAGGAATTATGATCCTGCAGAACCTGAAGATGATCATGGACATTATGACTATTATGATCACCACCAAGGTCGAGGAGATTATGAGAATCCAGATGCACAAGGTGGGGATGATCGCTATAAAGATGCCAGTCGTGGTCATGATCGTTATGATCAAATGGAAGAGGATAATTATGCTTATGACCACGGGGCATCTGAGACAAAAGAAAGGGATCGGGATTACAAGCGT</gDNA_template>
            <first_frame> G  R  T  V  P  N  W  R  P  R  R  L  G  G  G  L  G  T  T  R  V  G  N  E  D  A  T  R :   E  V  V  Q  P  G  R  A  A  S  R  S  E  E  P  R  A  R  D  D  R  D  R :   D  R  E  K  S  R  E  R  V  R  D  K  D  R  E  K  S  R  E  R  S  H  D  R  P  R  E  R  E  R  D  D  K  H  H  R  E  R  E  R  T  R  E  R  E  K  D  R  G  R  D  R  D  R  D  R  E   : R  D  R  E  Y  D  Y  E  H  V  D  S  K  H  E  R  D  R  H  G  D  K  E  R  N  Y  D  P  A  E  P  E  D  D  H  G  H  Y  D  Y  Y  D  H  H  Q  G  R  G  D  Y  E  N  P  D  A  Q  G  G  D  D  R  Y  K  D  A  S  R  G  H  D  R  Y  D  Q  M  E  E  D  N  Y  A  Y  D  H  G  A  S  E  T  K  E  R  D  R  D  Y  K  R </first_frame>
            <second_frame>  V  E  Q  S  P  I  G  V  P  A  D  L  V  V  D  L  E  Q  Q  E  L  E  M  K  M  L  L   : E  R  W  F  S  L  E  G  Q  H  L  A  L  R  S  Q  E  H  E  M  T  G  I   : G  I  G  R  S  P  V  K  G  C  E  I  R  T  E  R  N  L  V  S  V  L  M  T  G  Q  G  N  V  K  E  M  T  N  I  I  G  N  A  R  E  P  E  K  E  K  K  I  V  V  V  T  V  I  E  T  A  N  :  V  I  E  N  M  I  M  S  M  L  I  Q  N  T  S  E  T  D  T  V  T  K  R  G  I  M  I  L  Q  N  L  K  M  I  M  D  I  M  T  I  M  I  T  T  K  V  E  E  I  M  R  I  Q  M  H  K  V  G  M  I  A  I  K  M  P  V  V  V  M  I  V  M  I  K  W  K  R  I  I  M  L  M  T  T  G  H  L  R  Q  K  K  G  I  G  I  T  S   </second_frame>
            <third_frame>   *  N  S  P  Q  L  A  S  P  Q  T  W  W  W  T  W  N  N  K  S  W  K  *  R  C  Y  *  :  R  G  G  S  A  W  K  G  S  I  S  L  *  G  A  K  S  T  R  *  Q  G  *  :  G  S  G  E  V  P  *  K  G  A  R  *  G  Q  R  E  I  S  *  A  F  S  *  Q  A  K  G  T  *  K  R  *  Q  T  S  *  G  T  R  E  N  Q  R  K  R  K  R  S  W  S  *  P  *  S  R  P  R  T :   *  *  R  I  *  L  *  A  C  *  F  K  T  R  A  R  P  T  R  *  Q  R  E  E  L  *  S  C  R  T  *  R  *  S  W  T  L  *  L  L  *  S  P  P  R  S  R  R  L  *  E  S  R  C  T  R  W  G  *  S  L  *  R  C  Q  S  W  S  *  S  L  *  S  N  G  R  G  *  L  C  L  *  P  R  G  I  *  D  K  R  K  G  S  G  L  Q  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5008" stop="5090"/>
                    <exon start="5535" stop="5603"/>
                    <exon start="5788" stop="5960"/>
                    <exon start="6096" stop="6388"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>618</number_coding_nucleotides>
                  <number_encoded_amino_acids>206</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GRTVPNWRPRRLGGGLGTTRVGNEDATREVVQPGRAASRSEEPRARDDRDRDREKSRERVRDKDREKSRERSHDRPRERERDDKHHRERERTREREKDRGRDRDRDRERDREYDYEHVDSKHERDRHGDKERNYDPAEPEDDHGHYDYYDHHQGRGDYENPDAQGGDDRYKDASRGHDRYDQMEEDNYAYDHGASETKERDRDYKR</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5009" stop="5090"/>
                    <exon start="5535" stop="5603"/>
                    <exon start="5788" stop="5960"/>
                    <exon start="6096" stop="6386"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>615</number_coding_nucleotides>
                  <number_encoded_amino_acids>205</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VEQSPIGVPADLVVDLEQQELEMKMLLERWFSLEGQHLALRSQEHEMTGIGIGRSPVKGCEIRTERNLVSVLMTGQGNVKEMTNIIGNAREPEKEKKIVVVTVIETANVIENMIMSMLIQNTSETDTVTKRGIMILQNLKMIMDIMTIMITTKVEEIMRIQMHKVGMIAIKMPVVVMIVMIKWKRIIMLMTTGHLRQKKGIGITS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="6786" PGL_stop="6655"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6786" e_stop="6655"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="6786" e_stop="6655" e_length="132"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6786" stop="6655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602892" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACATAACAAACACATTACCGCGCACACATCCCCAATAAATTCGCATTTAACAAGTCACATTAGAACTCAGCAAGTAATTTACCAAACAATTCCAAAAGAAGATACAAAATTCAAAACATGGGCTGATGCGC</gDNA_template>
            <first_frame> H  I  T  N  T  L  P  R  T  H  P  Q  *  I  R  I  *  Q  V  T  L  E  L  S  K  *  F  T  K  Q  F  Q  K  K  I  Q  N  S  K  H  G  L  M  R </first_frame>
            <second_frame>  T  *  Q  T  H  Y  R  A  H  I  P  N  K  F  A  F  N  K  S  H  *  N  S  A  S  N  L  P  N  N  S  K  R  R  Y  K  I  Q  N  M  G  *  C   </second_frame>
            <third_frame>   H  N  K  H  I  T  A  H  T  S  P  I  N  S  H  L  T  S  H  I  R  T  Q  Q  V  I  Y  Q  T  I  P  K  E  D  T  K  F  K  T  W  A  D  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0215M12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="10971" PGL_stop="11943"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10971" e_stop="11390"/>
            <exon e_start="11577" e_stop="11736"/>
            <exon e_start="11821" e_stop="11943"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.974" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.908" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="10971" e_stop="11390" e_length="420"/>
          </exon>
          <intron i_serial="1" don_prob="0.974" acc_prob="0.976">
            <gDNA_intron_boundary i_start="11391" i_stop="11576" i_length="186"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="11577" e_stop="11736" e_length="160"/>
          </exon>
          <intron i_serial="2" don_prob="0.908" acc_prob="0.998">
            <gDNA_intron_boundary i_start="11737" i_stop="11820" i_length="84"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="11821" e_stop="11943" e_length="123"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10971" stop="11390"/>
              <exon start="11577" stop="11736"/>
              <exon start="11821" stop="11943"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597385" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAGGATATTCAAGCATACAAATTAAAAGTTTGTTTCTGCTCTTTTAATTCCCCTCAGGTTCTTCAAAGTGGAATATATATAGAAGTAGCCAATTTATTACCTCAGAGGAAGCTACTTCTATATATATTTCTTAATTAAGGCTATTTGAGTTGAACTTTTTATGATGGCTAATGAAGAGATAAAAAAGAGAATGAAGGCGTTTTTCGTATCAGCAGTATGGATACTATGCTGGGGATTATTCATAATAAGCGAAGCTGGGATTAATGCAGAAAGGCTTACTCTGAAGGATAAATTAGAGCCAGCTGCTACTTATAACATTAGTTATGTAGAGAATAATGAGATGAGACCACAAACCTTTGCAGTAAGGCTTGTGCATTTTCTGTGGAGTGGAAAGTCCTCTTATGAGCACGTTTGGCCG : GAGATGGAGTTTGGATGGAGAGTAATTGTTGGATCCATTGTGGGATTCTTTGGTGCTGCTTTGGGAAGCGTTGGAGGGGTTGGCGGCGGTGGAATTTTTGTTCCAATGCTAACTCTTATTATTGGCTTTGATCCAAAATCATCTACAGCTATATCCAAGT : GCATGATAATGGGAGCAGCTGGATCAACAGTGTACTACAACATGAGGCTGAGGCACCCAACTCTAGATATGCCTATAATTGACTATGATTTGGCTTTGCTCTTACAACCTATGCTCATGCTTG</gDNA_template>
            <first_frame> E  R  I  F  K  H  T  N  *  K  F  V  S  A  L  L  I  P  L  R  F  F  K  V  E  Y  I  *  K  *  P  I  Y  Y  L  R  G  S  Y  F  Y  I  Y  F  L  I  K  A  I  *  V  E  L  F  M  M  A  N  E  E  I  K  K  R  M  K  A  F  F  V  S  A  V  W  I  L  C  W  G  L  F  I  I  S  E  A  G  I  N  A  E  R  L  T  L  K  D  K  L  E  P  A  A  T  Y  N  I  S  Y  V  E  N  N  E  M  R  P  Q  T  F  A  V  R  L  V  H  F  L  W  S  G  K  S  S  Y  E  H  V  W  P  :  E  M  E  F  G  W  R  V  I  V  G  S  I  V  G  F  F  G  A  A  L  G  S  V  G  G  V  G  G  G  G  I  F  V  P  M  L  T  L  I  I  G  F  D  P  K  S  S  T  A  I  S  K   : C  M  I  M  G  A  A  G  S  T  V  Y  Y  N  M  R  L  R  H  P  T  L  D  M  P  I  I  D  Y  D  L  A  L  L  L  Q  P  M  L  M  L  </first_frame>
            <second_frame>  K  G  Y  S  S  I  Q  I  K  S  L  F  L  L  F  *  F  P  S  G  S  S  K  W  N  I  Y  R  S  S  Q  F  I  T  S  E  E  A  T  S  I  Y  I  S  *  L  R  L  F  E  L  N  F  L  *  W  L  M  K  R  *  K  R  E  *  R  R  F  S  Y  Q  Q  Y  G  Y  Y  A  G  D  Y  S  *  *  A  K  L  G  L  M  Q  K  G  L  L  *  R  I  N  *  S  Q  L  L  L  I  T  L  V  M  *  R  I  M  R  *  D  H  K  P  L  Q  *  G  L  C  I  F  C  G  V  E  S  P  L  M  S  T  F  G  R :   R  W  S  L  D  G  E  *  L  L  D  P  L  W  D  S  L  V  L  L  W  E  A  L  E  G  L  A  A  V  E  F  L  F  Q  C  *  L  L  L  L  A  L  I  Q  N  H  L  Q  L  Y  P  S  :  A  *  *  W  E  Q  L  D  Q  Q  C  T  T  T  *  G  *  G  T  Q  L  *  I  C  L  *  L  T  M  I  W  L  C  S  Y  N  L  C  S  C  L </second_frame>
            <third_frame>   K  D  I  Q  A  Y  K  L  K  V  C  F  C  S  F  N  S  P  Q  V  L  Q  S  G  I  Y  I  E  V  A  N  L  L  P  Q  R  K  L  L  L  Y  I  F  L  N  *  G  Y  L  S  *  T  F  Y  D  G  *  *  R  D  K  K  E  N  E  G  V  F  R  I  S  S  M  D  T  M  L  G  I  I  H  N  K  R  S  W  D  *  C  R  K  A  Y  S  E  G  *  I  R  A  S  C  Y  L  *  H  *  L  C  R  E  *  *  D  E  T  T  N  L  C  S  K  A  C  A  F  S  V  E  W  K  V  L  L  *  A  R  L  A   : G  D  G  V  W  M  E  S  N  C  W  I  H  C  G  I  L  W  C  C  F  G  K  R  W  R  G  W  R  R  W  N  F  C  S  N  A  N  S  Y  Y  W  L  *  S  K  I  I  Y  S  Y  I  Q  V :   H  D  N  G  S  S  W  I  N  S  V  L  Q  H  E  A  E  A  P  N  S  R  Y  A  Y  N  *  L  *  F  G  F  A  L  T  T  Y  A  H  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11121" stop="11390"/>
                    <exon start="11577" stop="11736"/>
                    <exon start="11821" stop="11942"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VELFMMANEEIKKRMKAFFVSAVWILCWGLFIISEAGINAERLTLKDKLEPAATYNISYVENNEMRPQTFAVRLVHFLWSGKSSYEHVWPEMEFGWRVIVGSIVGFFGAALGSVGGVGGGGIFVPMLTLIIGFDPKSSTAISKCMIMGAAGSTVYYNMRLRHPTLDMPIIDYDLALLLQPMLML</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="12638" PGL_stop="13843"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12638" e_stop="12722"/>
            <exon e_start="12820" e_stop="12870"/>
            <exon e_start="12957" e_stop="13178"/>
            <exon e_start="13374" e_stop="13467"/>
            <exon e_start="13567" e_stop="13707"/>
            <exon e_start="13790" e_stop="13843"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.979" e_score="0.953"/>
          <exon-intron don_prob="0.944" acc_prob="0.916" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.413" e_score="0.995"/>
          <exon-intron don_prob="0.843" acc_prob="0.987" e_score="0.989"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="0.943"/>
          <exon-only e_score="0.778"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.953">
            <gDNA_exon_boundary e_start="12638" e_stop="12722" e_length="85"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.979">
            <gDNA_intron_boundary i_start="12723" i_stop="12819" i_length="97"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="12820" e_stop="12870" e_length="51"/>
          </exon>
          <intron i_serial="2" don_prob="0.944" acc_prob="0.916">
            <gDNA_intron_boundary i_start="12871" i_stop="12956" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="12957" e_stop="13178" e_length="222"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.413">
            <gDNA_intron_boundary i_start="13179" i_stop="13373" i_length="195"/>
          </intron>
          <exon e_serial="4" e_score="0.989">
            <gDNA_exon_boundary e_start="13374" e_stop="13467" e_length="94"/>
          </exon>
          <intron i_serial="4" don_prob="0.843" acc_prob="0.987">
            <gDNA_intron_boundary i_start="13468" i_stop="13566" i_length="99"/>
          </intron>
          <exon e_serial="5" e_score="0.943">
            <gDNA_exon_boundary e_start="13567" e_stop="13707" e_length="141"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="13708" i_stop="13789" i_length="82"/>
          </intron>
          <exon e_serial="6" e_score="0.778">
            <gDNA_exon_boundary e_start="13790" e_stop="13843" e_length="54"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12638" stop="12722"/>
              <exon start="12820" stop="12870"/>
              <exon start="12957" stop="13178"/>
              <exon start="13374" stop="13467"/>
              <exon start="13567" stop="13707"/>
              <exon start="13790" stop="13843"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599720" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCCATGCTTCGCAACGTTTACTGGAAAGAATTGGGACTTCTAATGTTTGTTTGGGTGGCTTTCCTTGCTATTCAAGTTGTCAAG : ACCTACACCGTGACATGCTCCATCGGGTACTGGATTTTAAATTTATTGCAG : GTACCTGTTGCTGTTTCGGTTTCGTTGTATGAAGCAGTATGTCTGTACAAGGGGACAAGGGTGATTGCATCAAAAGGAAAGGAGATAACAAACTGGAAGCCACATCTACTCTTCTTTTACTGTTGTTGTGGCATAGTTGCTGGTATTGTTGGCGGATTGCTTGGTCTCGGAGGTGGCTTCATCCTTGGACCACTGTTTCTAGAACTTGGAATTCCTCCTCAG : GTAGCAAGTGCAACATCAACCTTTTCAATGACTTTCTCATCCTCTATGTCAGTTGTGCAATATTACCTATTGAAGCGTTTCCCTGTCCCATACG : CTACTTATTTCGTTTCAATAGCAACAATTGCTGCAGTAGTTGGTCAACACGTTATAAGAAGAGTAATTGCACTGCTTGGAAGAGCCTCTATAATCATATTCATACTGGCCATGACAATATTTACCAGTGCAATCAGCTTAG : GTGGTGTGGGGATAGCAAATATGATAGAGAAGCTGAAGAACAATGACTATATGG</gDNA_template>
            <first_frame> S  H  A  S  Q  R  L  L  E  R  I  G  T  S  N  V  C  L  G  G  F  P  C  Y  S  S  C  Q   : D  L  H  R  D  M  L  H  R  V  L  D  F  K  F  I  A   : G  T  C  C  C  F  G  F  V  V  *  S  S  M  S  V  Q  G  D  K  G  D  C  I  K  R  K  G  D  N  K  L  E  A  T  S  T  L  L  L  L  L  L  W  H  S  C  W  Y  C  W  R  I  A  W  S  R  R  W  L  H  P  W  T  T  V  S  R  T  W  N  S  S  S   : G  S  K  C  N  I  N  L  F  N  D  F  L  I  L  Y  V  S  C  A  I  L  P  I  E  A  F  P  C  P  I  R :   Y  L  F  R  F  N  S  N  N  C  C  S  S  W  S  T  R  Y  K  K  S  N  C  T  A  W  K  S  L  Y  N  H  I  H  T  G  H  D  N  I  Y  Q  C  N  Q  L  R :   W  C  G  D  S  K  Y  D  R  E  A  E  E  Q  *  L  Y   </first_frame>
            <second_frame>  P  M  L  R  N  V  Y  W  K  E  L  G  L  L  M  F  V  W  V  A  F  L  A  I  Q  V  V  K  :  T  Y  T  V  T  C  S  I  G  Y  W  I  L  N  L  L  Q  :  V  P  V  A  V  S  V  S  L  Y  E  A  V  C  L  Y  K  G  T  R  V  I  A  S  K  G  K  E  I  T  N  W  K  P  H  L  L  F  F  Y  C  C  C  G  I  V  A  G  I  V  G  G  L  L  G  L  G  G  G  F  I  L  G  P  L  F  L  E  L  G  I  P  P  Q  :  V  A  S  A  T  S  T  F  S  M  T  F  S  S  S  M  S  V  V  Q  Y  Y  L  L  K  R  F  P  V  P  Y   : A  T  Y  F  V  S  I  A  T  I  A  A  V  V  G  Q  H  V  I  R  R  V  I  A  L  L  G  R  A  S  I  I  I  F  I  L  A  M  T  I  F  T  S  A  I  S  L   : G  G  V  G  I  A  N  M  I  E  K  L  K  N  N  D  Y  M  </second_frame>
            <third_frame>   P  C  F  A  T  F  T  G  K  N  W  D  F  *  C  L  F  G  W  L  S  L  L  F  K  L  S  R :   P  T  P  *  H  A  P  S  G  T  G  F  *  I  Y  C  R :   Y  L  L  L  F  R  F  R  C  M  K  Q  Y  V  C  T  R  G  Q  G  *  L  H  Q  K  E  R  R  *  Q  T  G  S  H  I  Y  S  S  F  T  V  V  V  A  *  L  L  V  L  L  A  D  C  L  V  S  E  V  A  S  S  L  D  H  C  F  *  N  L  E  F  L  L  R :   *  Q  V  Q  H  Q  P  F  Q  *  L  S  H  P  L  C  Q  L  C  N  I  T  Y  *  S  V  S  L  S  H  T  :  L  L  I  S  F  Q  *  Q  Q  L  L  Q  *  L  V  N  T  L  *  E  E  *  L  H  C  L  E  E  P  L  *  S  Y  S  Y  W  P  *  Q  Y  L  P  V  Q  S  A  *  :  V  V  W  G  *  Q  I  *  *  R  S  *  R  T  M  T  I  W </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12639" stop="12722"/>
                    <exon start="12820" stop="12870"/>
                    <exon start="12957" stop="13178"/>
                    <exon start="13374" stop="13467"/>
                    <exon start="13567" stop="13707"/>
                    <exon start="13790" stop="13842"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>645</number_coding_nucleotides>
                  <number_encoded_amino_acids>215</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PMLRNVYWKELGLLMFVWVAFLAIQVVKTYTVTCSIGYWILNLLQVPVAVSVSLYEAVCLYKGTRVIASKGKEITNWKPHLLFFYCCCGIVAGIVGGLLGLGGGFILGPLFLELGIPPQVASATSTFSMTFSSSMSVVQYYLLKRFPVPYATYFVSIATIAAVVGQHVIRRVIALLGRASIIIFILAMTIFTSAISLGGVGIANMIEKLKNNDYM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="23819" PGL_stop="24290"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23819" e_stop="24290"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="23819" e_stop="24290" e_length="472"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23819" stop="24290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581967" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGGCAAGGAAAAATTCCTTGGTTTCATGAACTTACAAATGACCCATACCAATCTTAGATTATTTACATGCTCCTCTATAACATAATATTGTACTTGTTCTCATCCAAAAAGAAATATATGCAAGTTGTTGAGAAGAGAGGGGAAAAAATATATCAGAGGCAGCCTCCTTGTTCCAATCTGTATAGGTATGAGTTGAGCTCAGTTTCTAACTTGAGCTCATTTGACAAAATCTTGTTTGTTCAATATTGTTGTACTAAAATCAGATAAATGTACCAAAAAATCACAAAGATAAGAGGAGAAAGATTGGAGATATTTTCTTGTAAGAGCCTCTATCCATGCATTATTAACCCTCATTTCTACGTCTGTATGTCCAGTTTACTCGTCGAGCAGTATCTTTTCCTTGGTTTCTTGTTTAAATGGTTGAGTAATCAAACTTGTGGTACTGCAAATTTTCCAACTCTCGGAGATAAA</gDNA_template>
            <first_frame> L  A  R  K  N  S  L  V  S  *  T  Y  K  *  P  I  P  I  L  D  Y  L  H  A  P  L  *  H  N  I  V  L  V  L  I  Q  K  E  I  Y  A  S  C  *  E  E  R  G  K  N  I  S  E  A  A  S  L  F  Q  S  V  *  V  *  V  E  L  S  F  *  L  E  L  I  *  Q  N  L  V  C  S  I  L  L  Y  *  N  Q  I  N  V  P  K  N  H  K  D  K  R  R  K  I  G  D  I  F  L  *  E  P  L  S  M  H  Y  *  P  S  F  L  R  L  Y  V  Q  F  T  R  R  A  V  S  F  P  W  F  L  V  *  M  V  E  *  S  N  L  W  Y  C  K  F  S  N  S  R  R  *  </first_frame>
            <second_frame>  W  Q  G  K  I  P  W  F  H  E  L  T  N  D  P  Y  Q  S  *  I  I  Y  M  L  L  Y  N  I  I  L  Y  L  F  S  S  K  K  K  Y  M  Q  V  V  E  K  R  G  E  K  I  Y  Q  R  Q  P  P  C  S  N  L  Y  R  Y  E  L  S  S  V  S  N  L  S  S  F  D  K  I  L  F  V  Q  Y  C  C  T  K  I  R  *  M  Y  Q  K  I  T  K  I  R  G  E  R  L  E  I  F  S  C  K  S  L  Y  P  C  I  I  N  P  H  F  Y  V  C  M  S  S  L  L  V  E  Q  Y  L  F  L  G  F  L  F  K  W  L  S  N  Q  T  C  G  T  A  N  F  P  T  L  G  D  K </second_frame>
            <third_frame>   G  K  E  K  F  L  G  F  M  N  L  Q  M  T  H  T  N  L  R  L  F  T  C  S  S  I  T  *  Y  C  T  C  S  H  P  K  R  N  I  C  K  L  L  R  R  E  G  K  K  Y  I  R  G  S  L  L  V  P  I  C  I  G  M  S  *  A  Q  F  L  T  *  A  H  L  T  K  S  C  L  F  N  I  V  V  L  K  S  D  K  C  T  K  K  S  Q  R  *  E  E  K  D  W  R  Y  F  L  V  R  A  S  I  H  A  L  L  T  L  I  S  T  S  V  C  P  V  Y  S  S  S  S  I  F  S  L  V  S  C  L  N  G  *  V  I  K  L  V  V  L  Q  I  F  Q  L  S  E  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23877" stop="24086"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IIYMLLYNIILYLFSSKKKYMQVVEKRGEKIYQRQPPCSNLYRYELSSVSNLSSFDKILFVQYCCTKIR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24087" stop="24290"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MYQKITKIRGERLEIFSCKSLYPCIINPHFYVCMSSLLVEQYLFLGFLFKWLSNQTCGTANFPTLGDK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="25972" PGL_stop="24334"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25972" e_stop="25781"/>
            <exon e_start="25493" e_stop="25441"/>
            <exon e_start="25336" e_stop="25227"/>
            <exon e_start="24910" e_stop="24743"/>
            <exon e_start="24671" e_stop="24447"/>
            <exon e_start="24354" e_stop="24334"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="0.999" e_score="0.995"/>
          <exon-intron don_prob="0.655" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.924" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.921" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.940" e_score="0.951"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="25972" e_stop="25781" e_length="192"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="0.999">
            <gDNA_intron_boundary i_start="25780" i_stop="25494" i_length="287"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="25493" e_stop="25441" e_length="53"/>
          </exon>
          <intron i_serial="2" don_prob="0.655" acc_prob="0.953">
            <gDNA_intron_boundary i_start="25440" i_stop="25337" i_length="104"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="25336" e_stop="25227" e_length="110"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.924">
            <gDNA_intron_boundary i_start="25226" i_stop="24911" i_length="316"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="24910" e_stop="24743" e_length="168"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.921">
            <gDNA_intron_boundary i_start="24742" i_stop="24672" i_length="71"/>
          </intron>
          <exon e_serial="5" e_score="0.951">
            <gDNA_exon_boundary e_start="24671" e_stop="24447" e_length="225"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.940">
            <gDNA_intron_boundary i_start="24446" i_stop="24355" i_length="92"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="24354" e_stop="24334" e_length="21"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25972" stop="25781"/>
              <exon start="25493" stop="25441"/>
              <exon start="25336" stop="25227"/>
              <exon start="24910" stop="24743"/>
              <exon start="24671" stop="24447"/>
              <exon start="24354" stop="24334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600903" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATATTCATTTTTGGGGAAGAAGAAGGAGGGAGATCTATAATGGCGACGCCAAGAGCAGATAGGGAATTAGAGCTTCTCATACCAATGGGAGGCGTTGAGAATATTAATGCTAGTCACTCCAAATCTTCTTCTCCTTCTCATTCCCCTAAGATTCCATCTTCTTCTAGGTCTCATCACTCTTCTGGCAAAGAG : GCATTTAGCAAAGTTATTCGTAGCTGGACTTGGAAAAAGTTCATCAGCGGATG : TGTCATCTTATTTCCCATAGCCATAACTTTTTACATCACCTGGTGGTTCATTCATTTTGTGGATGCCTTCTTTTCCCCGATCTATAACCACCTTGGAATCAATGTATTTG : GCCTTGGATTTGTTACCTCCATGACTTTCATCTTCTTCGTTGGGGTGTTCATGTCCTCATGGTTAGGTGCATCTCTTCTTAGTTTAGGAGAGTGGTTCATAAAAAAAATGCCCCTCATGAGCTACATCTACTCTGCCTCCAAGCAAATTAGCTCAGCAATTTCACCAG : ATAAAACTTCACATGCCTTCAAAGAAGTGGCCATAATAAGGCATCCGCGTCTTGGTGAATATGCATTTGGTTTTATCACTTCAACAGTCATACTTCACAAGCATTCAGGTGCAGAGGAACTCTGCTGTGTTTATGTGCCAACTAATCACCTCTATCTTGGAGATATCTTTCTTGTGAATTCTAAAGACGTTATGAGGCCCAATCTCTCTGTTCGAGAGGGTATAG : AAATTGTAATCTCCGGGGGCA</gDNA_template>
            <first_frame> I  F  I  F  G  E  E  E  G  G  R  S  I  M  A  T  P  R  A  D  R  E  L  E  L  L  I  P  M  G  G  V  E  N  I  N  A  S  H  S  K  S  S  S  P  S  H  S  P  K  I  P  S  S  S  R  S  H  H  S  S  G  K  E  :  A  F  S  K  V  I  R  S  W  T  W  K  K  F  I  S  G  C :   V  I  L  F  P  I  A  I  T  F  Y  I  T  W  W  F  I  H  F  V  D  A  F  F  S  P  I  Y  N  H  L  G  I  N  V  F   : G  L  G  F  V  T  S  M  T  F  I  F  F  V  G  V  F  M  S  S  W  L  G  A  S  L  L  S  L  G  E  W  F  I  K  K  M  P  L  M  S  Y  I  Y  S  A  S  K  Q  I  S  S  A  I  S  P   : D  K  T  S  H  A  F  K  E  V  A  I  I  R  H  P  R  L  G  E  Y  A  F  G  F  I  T  S  T  V  I  L  H  K  H  S  G  A  E  E  L  C  C  V  Y  V  P  T  N  H  L  Y  L  G  D  I  F  L  V  N  S  K  D  V  M  R  P  N  L  S  V  R  E  G  I   : E  I  V  I  S  G  G  </first_frame>
            <second_frame>  Y  S  F  L  G  K  K  K  E  G  D  L  *  W  R  R  Q  E  Q  I  G  N  *  S  F  S  Y  Q  W  E  A  L  R  I  L  M  L  V  T  P  N  L  L  L  L  L  I  P  L  R  F  H  L  L  L  G  L  I  T  L  L  A  K  R :   H  L  A  K  L  F  V  A  G  L  G  K  S  S  S  A  D   : V  S  S  Y  F  P  *  P  *  L  F  T  S  P  G  G  S  F  I  L  W  M  P  S  F  P  R  S  I  T  T  L  E  S  M  Y  L  :  A  L  D  L  L  P  P  *  L  S  S  S  S  L  G  C  S  C  P  H  G  *  V  H  L  F  L  V  *  E  S  G  S  *  K  K  C  P  S  *  A  T  S  T  L  P  P  S  K  L  A  Q  Q  F  H  Q  :  I  K  L  H  M  P  S  K  K  W  P  *  *  G  I  R  V  L  V  N  M  H  L  V  L  S  L  Q  Q  S  Y  F  T  S  I  Q  V  Q  R  N  S  A  V  F  M  C  Q  L  I  T  S  I  L  E  I  S  F  L  *  I  L  K  T  L  *  G  P  I  S  L  F  E  R  V  *  :  K  L  *  S  P  G  A </second_frame>
            <third_frame>   I  H  F  W  G  R  R  R  R  E  I  Y  N  G  D  A  K  S  R  *  G  I  R  A  S  H  T  N  G  R  R  *  E  Y  *  C  *  S  L  Q  I  F  F  S  F  S  F  P  *  D  S  I  F  F  *  V  S  S  L  F  W  Q  R   : G  I  *  Q  S  Y  S  *  L  D  L  E  K  V  H  Q  R  M  :  C  H  L  I  S  H  S  H  N  F  L  H  H  L  V  V  H  S  F  C  G  C  L  L  F  P  D  L  *  P  P  W  N  Q  C  I  W :   P  W  I  C  Y  L  H  D  F  H  L  L  R  W  G  V  H  V  L  M  V  R  C  I  S  S  *  F  R  R  V  V  H  K  K  N  A  P  H  E  L  H  L  L  C  L  Q  A  N  *  L  S  N  F  T  R :   *  N  F  T  C  L  Q  R  S  G  H  N  K  A  S  A  S  W  *  I  C  I  W  F  Y  H  F  N  S  H  T  S  Q  A  F  R  C  R  G  T  L  L  C  L  C  A  N  *  S  P  L  S  W  R  Y  L  S  C  E  F  *  R  R  Y  E  A  Q  S  L  C  S  R  G  Y  R :   N  C  N  L  R  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25972" stop="25781"/>
                    <exon start="25493" stop="25441"/>
                    <exon start="25336" stop="25227"/>
                    <exon start="24910" stop="24743"/>
                    <exon start="24671" stop="24447"/>
                    <exon start="24354" stop="24335"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>768</number_coding_nucleotides>
                  <number_encoded_amino_acids>256</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFIFGEEEGGRSIMATPRADRELELLIPMGGVENINASHSKSSSPSHSPKIPSSSRSHHSSGKEAFSKVIRSWTWKKFISGCVILFPIAITFYITWWFIHFVDAFFSPIYNHLGINVFGLGFVTSMTFIFFVGVFMSSWLGASLLSLGEWFIKKMPLMSYIYSASKQISSAISPDKTSHAFKEVAIIRHPRLGEYAFGFITSTVILHKHSGAEELCCVYVPTNHLYLGDIFLVNSKDVMRPNLSVREGIEIVISGG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="27756" PGL_stop="33821"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="27756" e_stop="28149"/>
            <exon e_start="33377" e_stop="33821"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.981" e_score="0.997"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="27756" e_stop="28149" e_length="394"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.981">
            <gDNA_intron_boundary i_start="28150" i_stop="33376" i_length="5227"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="33377" e_stop="33821" e_length="445"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27756" stop="28149"/>
              <exon start="33377" stop="33821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574325" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTTGTTTCTCTTAATAAAATAGCATACTGTATTAAAAAAATCTTCTATCTTATTTCGTCTAACTGTGTACTGGGGTCATGCGAATCCCTCTCAGTTTAGCATTTTCTTCTTCGTTTTCCTTTTGCGTTGGACCAGTGTAACAGCTTATTCGGAGGGATCGTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTG : GGCTGATGTTGCAGTTGCTTTATTCTGCGCCTTGTTATTTGGTGTGCTTATATTATCATCATATGTGGCCCTTTATTTACGACATTACTGGAGTTCCTTTCTCATTATAAGCCTTGCCATTACCCTTCCAGTGCGTCTGAGAATGTTACGACAGGCTCATGCAAGAAAGAAAGTAAGACAGTTACCTTTGTCTATGTGAACTTCCTTCTACTTCTGGAAGCACCAAACAGTGGTTTAAGTGAAAGGAATACCTTTTGCACAAAAGTGCTCTCCAATTGTAGTAATACAGTTCTTTGATCTTCGTCACATAGGCTGACCAATCTTCTGCTGTGAAAGATGGGACACACCCTTCATATTACTCTTGATGACTCATTCATTAAGAAACAGGATTTAGACGATCAATTAGCTCCCTATGAAATGAACAACCAGAGCTCAAGGTTTCAGC</gDNA_template>
            <first_frame> N  L  F  L  L  I  K  *  H  T  V  L  K  K  S  S  I  L  F  R  L  T  V  Y  W  G  H  A  N  P  S  Q  F  S  I  F  F  F  V  F  L  L  R  W  T  S  V  T  A  Y  S  E  G  S  F  L  Q  L  L  I  Y  Q  Y  L  G  V  V  R  C  F  *  I  C  N  W  Y  *  R  Q  K  L  I  E  I  G  E  S  G  F  R  S  F  W  L  T  *  *  Q  G  L  N  W  L  S  S  S  E  I  I  R  S  D  L  N  T  S  A  L  L  L  L  S  F  H  Q  S  F  I  S  P  T   : G  L  M  L  Q  L  L  Y  S  A  P  C  Y  L  V  C  L  Y  Y  H  H  M  W  P  F  I  Y  D  I  T  G  V  P  F  S  L  *  A  L  P  L  P  F  Q  C  V  *  E  C  Y  D  R  L  M  Q  E  R  K  *  D  S  Y  L  C  L  C  E  L  P  S  T  S  G  S  T  K  Q  W  F  K  *  K  E  Y  L  L  H  K  S  A  L  Q  L  *  *  Y  S  S  L  I  F  V  T  *  A  D  Q  S  S  A  V  K  D  G  T  H  P  S  Y  Y  S  *  *  L  I  H  *  E  T  G  F  R  R  S  I  S  S  L  *  N  E  Q  P  E  L  K  V  S   </first_frame>
            <second_frame>  I  C  F  S  *  *  N  S  I  L  Y  *  K  N  L  L  S  Y  F  V  *  L  C  T  G  V  M  R  I  P  L  S  L  A  F  S  S  S  F  S  F  C  V  G  P  V  *  Q  L  I  R  R  D  R  F  F  N  C  *  S  T  N  T  *  V  *  F  V  A  S  E  F  A  I  G  I  E  G  K  N  *  L  R  S  E  N  Q  V  F  D  R  F  G  *  H  D  N  K  V  *  T  G  *  A  A  Q  R  L  S  D  P  I  S  T  Q  V  P  S  S  Y  F  L  F  T  K  A  L  S  L  Q  L  :  G  *  C  C  S  C  F  I  L  R  L  V  I  W  C  A  Y  I  I  I  I  C  G  P  L  F  T  T  L  L  E  F  L  S  H  Y  K  P  C  H  Y  P  S  S  A  S  E  N  V  T  T  G  S  C  K  K  E  S  K  T  V  T  F  V  Y  V  N  F  L  L  L  L  E  A  P  N  S  G  L  S  E  R  N  T  F  C  T  K  V  L  S  N  C  S  N  T  V  L  *  S  S  S  H  R  L  T  N  L  L  L  *  K  M  G  H  T  L  H  I  T  L  D  D  S  F  I  K  K  Q  D  L  D  D  Q  L  A  P  Y  E  M  N  N  Q  S  S  R  F  Q  </second_frame>
            <third_frame>   F  V  S  L  N  K  I  A  Y  C  I  K  K  I  F  Y  L  I  S  S  N  C  V  L  G  S  C  E  S  L  S  V  *  H  F  L  L  R  F  P  F  A  L  D  Q  C  N  S  L  F  G  G  I  V  S  S  I  A  N  L  P  I  P  R  C  S  S  L  L  L  N  L  Q  L  V  L  K  A  K  I  N  *  D  R  R  I  R  F  S  I  V  L  V  N  M  I  T  R  S  K  L  V  E  Q  L  R  D  Y  Q  I  R  S  Q  H  K  C  P  P  L  T  F  F  S  P  K  L  Y  L  S  N  W :   A  D  V  A  V  A  L  F  C  A  L  L  F  G  V  L  I  L  S  S  Y  V  A  L  Y  L  R  H  Y  W  S  S  F  L  I  I  S  L  A  I  T  L  P  V  R  L  R  M  L  R  Q  A  H  A  R  K  K  V  R  Q  L  P  L  S  M  *  T  S  F  Y  F  W  K  H  Q  T  V  V  *  V  K  G  I  P  F  A  Q  K  C  S  P  I  V  V  I  Q  F  F  D  L  R  H  I  G  *  P  I  F  C  C  E  R  W  D  T  P  F  I  L  L  L  M  T  H  S  L  R  N  R  I  *  T  I  N  *  L  P  M  K  *  T  T  R  A  Q  G  F  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28004" stop="28149"/>
                    <exon start="33377" stop="33575"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>342</number_coding_nucleotides>
                  <number_encoded_amino_acids>114</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DRRIRFSIVLVNMITRSKLVEQLRDYQIRSQHKCPPLTFFSPKLYLSNWADVAVALFCALLFGVLILSSYVALYLRHYWSSFLIISLAITLPVRLRMLRQAHARKKVRQLPLSM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33383" stop="33673"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CCSCFILRLVIWCAYIIIICGPLFTTLLEFLSHYKPCHYPSSASENVTTGSCKKESKTVTFVYVNFLLLLEAPNSGLSERNTFCTKVLSNCSNTVL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="27917" e_stop="28149"/>
            <exon e_start="31136" e_stop="31448"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.921" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="27917" e_stop="28149" e_length="233"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.921">
            <gDNA_intron_boundary i_start="28150" i_stop="31135" i_length="2986"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="31136" e_stop="31448" e_length="313"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27917" stop="28149"/>
              <exon start="31136" stop="31448"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596222" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTCTTCAATTGCTAATCTACCAATACCTAGGTGTAGTTCGTTGCTTCTGAATTTGCAATTGGTATTGAAGGCAAAAATTAATTGAGATCGGAGAATCAGGTTTTCGATCGTTTTGGTTAACATGATAACAAGGTCTAAACTGGTTGAGCAGCTCAGAGATTATCAGATCCGATCTCAACACAAGTGCCCTCCTCTTACTTTCTTTTCACCAAAGCTTTATCTCTCCAACTG : AAATTGCACCCAAGGTGTTGCCTAGTGGTCAATGAAGTGAGAAGAGAACCATGAGGTCTCAAGTTCAAATCCTAGCGGAGATAAAAAGACTTGGGGGTTTCTTCCCATTTGCCTAAGCCTTTGAGGCAAAATTATCTGGTACCTATGCTGGTGGGAGATAACAGGTGCCCAATGGAATAATTAAGGCACAAGCAAGCAGGCTCGGACACCACGATTATTTTAAAAAGAAGTATGCTGGAAATTGCTTTTTTTGTTTTGCATGTGAATAATTTAGAGAACGCCACAGATGCACCAATATCTCCAGTACACATGT</gDNA_template>
            <first_frame> V  S  S  I  A  N  L  P  I  P  R  C  S  S  L  L  L  N  L  Q  L  V  L  K  A  K  I  N  *  D  R  R  I  R  F  S  I  V  L  V  N  M  I  T  R  S  K  L  V  E  Q  L  R  D  Y  Q  I  R  S  Q  H  K  C  P  P  L  T  F  F  S  P  K  L  Y  L  S  N  * :   N  C  T  Q  G  V  A  *  W  S  M  K  *  E  E  N  H  E  V  S  S  S  N  P  S  G  D  K  K  T  W  G  F  L  P  I  C  L  S  L  *  G  K  I  I  W  Y  L  C  W  W  E  I  T  G  A  Q  W  N  N  *  G  T  S  K  Q  A  R  T  P  R  L  F  *  K  E  V  C  W  K  L  L  F  L  F  C  M  *  I  I  *  R  T  P  Q  M  H  Q  Y  L  Q  Y  T  C </first_frame>
            <second_frame>  F  L  Q  L  L  I  Y  Q  Y  L  G  V  V  R  C  F  *  I  C  N  W  Y  *  R  Q  K  L  I  E  I  G  E  S  G  F  R  S  F  W  L  T  *  *  Q  G  L  N  W  L  S  S  S  E  I  I  R  S  D  L  N  T  S  A  L  L  L  L  S  F  H  Q  S  F  I  S  P  T   : E  I  A  P  K  V  L  P  S  G  Q  *  S  E  K  R  T  M  R  S  Q  V  Q  I  L  A  E  I  K  R  L  G  G  F  F  P  F  A  *  A  F  E  A  K  L  S  G  T  Y  A  G  G  R  *  Q  V  P  N  G  I  I  K  A  Q  A  S  R  L  G  H  H  D  Y  F  K  K  K  Y  A  G  N  C  F  F  C  F  A  C  E  *  F  R  E  R  H  R  C  T  N  I  S  S  T  H   </second_frame>
            <third_frame>   F  F  N  C  *  S  T  N  T  *  V  *  F  V  A  S  E  F  A  I  G  I  E  G  K  N  *  L  R  S  E  N  Q  V  F  D  R  F  G  *  H  D  N  K  V  *  T  G  *  A  A  Q  R  L  S  D  P  I  S  T  Q  V  P  S  S  Y  F  L  F  T  K  A  L  S  L  Q  L  :  K  L  H  P  R  C  C  L  V  V  N  E  V  R  R  E  P  *  G  L  K  F  K  S  *  R  R  *  K  D  L  G  V  S  S  H  L  P  K  P  L  R  Q  N  Y  L  V  P  M  L  V  G  D  N  R  C  P  M  E  *  L  R  H  K  Q  A  G  S  D  T  T  I  I  L  K  R  S  M  L  E  I  A  F  F  V  L  H  V  N  N  L  E  N  A  T  D  A  P  I  S  P  V  H  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0215M12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="46311" PGL_stop="50821"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46311" e_stop="46589"/>
            <exon e_start="46656" e_stop="46980"/>
            <exon e_start="47267" e_stop="47419"/>
            <exon e_start="47525" e_stop="47761"/>
            <exon e_start="47848" e_stop="47940"/>
            <exon e_start="48112" e_stop="48190"/>
            <exon e_start="48302" e_stop="48408"/>
            <exon e_start="50216" e_stop="50821"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.854" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.930" acc_prob="0.919" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.964" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="46311" e_stop="46589" e_length="279"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="46590" i_stop="46655" i_length="66"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="46656" e_stop="46980" e_length="325"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.990">
            <gDNA_intron_boundary i_start="46981" i_stop="47266" i_length="286"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="47267" e_stop="47419" e_length="153"/>
          </exon>
          <intron i_serial="3" don_prob="0.854" acc_prob="0.983">
            <gDNA_intron_boundary i_start="47420" i_stop="47524" i_length="105"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="47525" e_stop="47761" e_length="237"/>
          </exon>
          <intron i_serial="4" don_prob="0.994" acc_prob="0.998">
            <gDNA_intron_boundary i_start="47762" i_stop="47847" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="47848" e_stop="47940" e_length="93"/>
          </exon>
          <intron i_serial="5" don_prob="0.961" acc_prob="1.000">
            <gDNA_intron_boundary i_start="47941" i_stop="48111" i_length="171"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="48112" e_stop="48190" e_length="79"/>
          </exon>
          <intron i_serial="6" don_prob="0.930" acc_prob="0.919">
            <gDNA_intron_boundary i_start="48191" i_stop="48301" i_length="111"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="48302" e_stop="48408" e_length="107"/>
          </exon>
          <intron i_serial="7" don_prob="0.990" acc_prob="0.964">
            <gDNA_intron_boundary i_start="48409" i_stop="50215" i_length="1807"/>
          </intron>
          <exon e_serial="8" e_score="0.997">
            <gDNA_exon_boundary e_start="50216" e_stop="50821" e_length="606"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46311" stop="46589"/>
              <exon start="46656" stop="46980"/>
              <exon start="47267" stop="47419"/>
              <exon start="47525" stop="47761"/>
              <exon start="47848" stop="47940"/>
              <exon start="48112" stop="48190"/>
              <exon start="48302" stop="48408"/>
              <exon start="50216" stop="50821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567839" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCTTCAGAAACAGAGCTTATTGAGTGTTGAAACTGAAAAAGAAGAAGAAAGAAATAGAGAAGAAGGAATAACATCAATGTCTGACTTAGAGTTTTTTCTTTTTCTTATTCCTCCAATCTTAGCAGTACTTATAATTCTTAATCTATTCAAAAGAAAACACAACTTTCAAAATCTTCCACCAGGGGATATGGGTTGGCCTTTTCTTGGTGAAACTATTGGTTATTTGAGACCTTATTCAGCTACTACTATTGGAGATTTCATGCAAGATCATATTTCTAG : GTATGGGAAAATTTTCAAGTCAAATTTGTTTGGAGAGCCAACAATAGTTTCAGCAGATGCAGGGCTAAACAGATACATTCTGCAGAATGAAGGGAGATTATTTGAGTGTAATTATCCAAGAAGTATAGGTGGGATACTTGGTAAATGGTCTATGTTAGTTCAAGTTGGACAAATGCATAGAGATATGAGGATGATTTCTCTGAATTTTTTGAGCAATGCTAGGCTAAGGAATCAACTTTTAAGTGAAGTTGAAAAGCATACTTTGCTTGTTCTTGGCTCTTGGAAACAGGATTCTGTTGTTTGTGCACAAGATGAAGCAAAGAAG : TTAACATTCAACTTTATGGCAGAGCATATCATGAGTCTACAACCTGGAAATCCAGAGACAGAGAAGCTGAAAAAAGAGTACATCACATTTATGAAAGGAGTGGTTTCTGCTCCATTGAATTTTCCAGGAACAGCTTACAGAAAGGCCTTACAG : TCTCGATCAACAATTCTTGGATTTATTGAGAGAAAAATGGAGGAGAGGCTTAAGGAAATGAACAGAAACGAAAACGACCTTCTAGGTTGGGTTCTGAAGAATTCAAATCTCTCAAAAGAGCAAATTCTTGATTTGCTACTGAGTTTGCTCTTTGCTGGCCATGAAACTTCATCAGTAGCAATAGCTCTGTCTATTTTCTTACTCGAAAGCTGTCCTGCTGCTGTTCAACAATTAACA : GAAGAGCACTTGGAGATTTCCCGGGCAAAAAAACAGTCAGGAGAAACAGAATTAAATTGGGATGACTACAAGAAAATGGAATTCACCCAATGT : GTTATTAATGAGACTCTAAGACTTGGGAATGTAGTGAGGTTTCTGCACAGGAAAGCTGTGAAAGATGTTCGATATAAAG : GTTATGATATTCCATGTGGATGGAAAGTGTTGCCGGTGATTTCAGCAGCGCATTTAGATCCTTCACTTTTCGACCGACCTCACGACTTTGATCCTTGGAGATGGCAG : AACGCAGAAGAGTCGCCTTCAGGTAAAGGAGGAAGCACAGGCACAAGCAGCACAACAAAAAGTAGTAATAATTTCATGCCATTTGGGGGAGGTCCACGTCTATGTGCAGGATCTGAACTGGCCAAACTTGAGATGGCCATTTTCATTCACTATCTTGTTCTTAATTTTCACTGGAAATTAGCTGCAACTGATCAGGCTTTTGCCTATCCTTACGTAGATTTTCCCAATGCCCTACCTATCAATATCCAACATCGATCGTTAAATAAATTACATGACTAGCCCTAATTCATCGTATTAGAATCTACGTTCGCTCGCACATCGCATCGTCTATGGGTAAACATTTTATTATATTGTATAAATAAAAAATGGTAGCTGAACAAATGGGAAAGAGGATGGTACTTGAAATGATTCAAACCAAAAGAGATGTTTTGTAAATCTAGCTAATTATCTAGGAGGTGAAGCAGCTGCTACAGTTTTTGTTCTCTCTTTTTTTTTTTTGCTTTATCTCTTCTCTTGTTTTTTTTTTCTTTTTTCTTTCCGTTACGTAGTACATAATTTTCTATGTAATTAAATACAGCGAAATTATTCGATTCTCCGTTTTTACTT</gDNA_template>
            <first_frame> A  S  E  T  E  L  I  E  C  *  N  *  K  R  R  R  K  K  *  R  R  R  N  N  I  N  V  *  L  R  V  F  S  F  S  Y  S  S  N  L  S  S  T  Y  N  S  *  S  I  Q  K  K  T  Q  L  S  K  S  S  T  R  G  Y  G  L  A  F  S  W  *  N  Y  W  L  F  E  T  L  F  S  Y  Y  Y  W  R  F  H  A  R  S  Y  F  *  :  V  W  E  N  F  Q  V  K  F  V  W  R  A  N  N  S  F  S  R  C  R  A  K  Q  I  H  S  A  E  *  R  E  I  I  *  V  *  L  S  K  K  Y  R  W  D  T  W  *  M  V  Y  V  S  S  S  W  T  N  A  *  R  Y  E  D  D  F  S  E  F  F  E  Q  C  *  A  K  E  S  T  F  K  *  S  *  K  A  Y  F  A  C  S  W  L  L  E  T  G  F  C  C  L  C  T  R  *  S  K  E   : V  N  I  Q  L  Y  G  R  A  Y  H  E  S  T  T  W  K  S  R  D  R  E  A  E  K  R  V  H  H  I  Y  E  R  S  G  F  C  S  I  E  F  S  R  N  S  L  Q  K  G  L  T   : V  S  I  N  N  S  W  I  Y  *  E  K  N  G  G  E  A  *  G  N  E  Q  K  R  K  R  P  S  R  L  G  S  E  E  F  K  S  L  K  R  A  N  S  *  F  A  T  E  F  A  L  C  W  P  *  N  F  I  S  S  N  S  S  V  Y  F  L  T  R  K  L  S  C  C  C  S  T  I  N   : R  R  A  L  G  D  F  P  G  K  K  T  V  R  R  N  R  I  K  L  G  *  L  Q  E  N  G  I  H  P  M   : C  Y  *  *  D  S  K  T  W  E  C  S  E  V  S  A  Q  E  S  C  E  R  C  S  I  *  R :   L  *  Y  S  M  W  M  E  S  V  A  G  D  F  S  S  A  F  R  S  F  T  F  R  P  T  S  R  L  *  S  L  E  M  A   : E  R  R  R  V  A  F  R  *  R  R  K  H  R  H  K  Q  H  N  K  K  *  *  *  F  H  A  I  W  G  R  S  T  S  M  C  R  I  *  T  G  Q  T  *  D  G  H  F  H  S  L  S  C  S  *  F  S  L  E  I  S  C  N  *  S  G  F  C  L  S  L  R  R  F  S  Q  C  P  T  Y  Q  Y  P  T  S  I  V  K  *  I  T  *  L  A  L  I  H  R  I  R  I  Y  V  R  S  H  I  A  S  S  M  G  K  H  F  I  I  L  Y  K  *  K  M  V  A  E  Q  M  G  K  R  M  V  L  E  M  I  Q  T  K  R  D  V  L  *  I  *  L  I  I  *  E  V  K  Q  L  L  Q  F  L  F  S  L  F  F  F  C  F  I  S  S  L  V  F  F  F  F  F  L  S  V  T  *  Y  I  I  F  Y  V  I  K  Y  S  E  I  I  R  F  S  V  F  T  </first_frame>
            <second_frame>  L  Q  K  Q  S  L  L  S  V  E  T  E  K  E  E  E  R  N  R  E  E  G  I  T  S  M  S  D  L  E  F  F  L  F  L  I  P  P  I  L  A  V  L  I  I  L  N  L  F  K  R  K  H  N  F  Q  N  L  P  P  G  D  M  G  W  P  F  L  G  E  T  I  G  Y  L  R  P  Y  S  A  T  T  I  G  D  F  M  Q  D  H  I  S  R :   Y  G  K  I  F  K  S  N  L  F  G  E  P  T  I  V  S  A  D  A  G  L  N  R  Y  I  L  Q  N  E  G  R  L  F  E  C  N  Y  P  R  S  I  G  G  I  L  G  K  W  S  M  L  V  Q  V  G  Q  M  H  R  D  M  R  M  I  S  L  N  F  L  S  N  A  R  L  R  N  Q  L  L  S  E  V  E  K  H  T  L  L  V  L  G  S  W  K  Q  D  S  V  V  C  A  Q  D  E  A  K  K  :  L  T  F  N  F  M  A  E  H  I  M  S  L  Q  P  G  N  P  E  T  E  K  L  K  K  E  Y  I  T  F  M  K  G  V  V  S  A  P  L  N  F  P  G  T  A  Y  R  K  A  L  Q  :  S  R  S  T  I  L  G  F  I  E  R  K  M  E  E  R  L  K  E  M  N  R  N  E  N  D  L  L  G  W  V  L  K  N  S  N  L  S  K  E  Q  I  L  D  L  L  L  S  L  L  F  A  G  H  E  T  S  S  V  A  I  A  L  S  I  F  L  L  E  S  C  P  A  A  V  Q  Q  L  T  :  E  E  H  L  E  I  S  R  A  K  K  Q  S  G  E  T  E  L  N  W  D  D  Y  K  K  M  E  F  T  Q  C  :  V  I  N  E  T  L  R  L  G  N  V  V  R  F  L  H  R  K  A  V  K  D  V  R  Y  K   : G  Y  D  I  P  C  G  W  K  V  L  P  V  I  S  A  A  H  L  D  P  S  L  F  D  R  P  H  D  F  D  P  W  R  W  Q  :  N  A  E  E  S  P  S  G  K  G  G  S  T  G  T  S  S  T  T  K  S  S  N  N  F  M  P  F  G  G  G  P  R  L  C  A  G  S  E  L  A  K  L  E  M  A  I  F  I  H  Y  L  V  L  N  F  H  W  K  L  A  A  T  D  Q  A  F  A  Y  P  Y  V  D  F  P  N  A  L  P  I  N  I  Q  H  R  S  L  N  K  L  H  D  *  P  *  F  I  V  L  E  S  T  F  A  R  T  S  H  R  L  W  V  N  I  L  L  Y  C  I  N  K  K  W  *  L  N  K  W  E  R  G  W  Y  L  K  *  F  K  P  K  E  M  F  C  K  S  S  *  L  S  R  R  *  S  S  C  Y  S  F  C  S  L  F  F  F  F  A  L  S  L  L  L  F  F  F  S  F  F  F  P  L  R  S  T  *  F  S  M  *  L  N  T  A  K  L  F  D  S  P  F  L  L </second_frame>
            <third_frame>   F  R  N  R  A  Y  *  V  L  K  L  K  K  K  K  K  E  I  E  K  K  E  *  H  Q  C  L  T  *  S  F  F  F  F  L  F  L  Q  S  *  Q  Y  L  *  F  L  I  Y  S  K  E  N  T  T  F  K  I  F  H  Q  G  I  W  V  G  L  F  L  V  K  L  L  V  I  *  D  L  I  Q  L  L  L  L  E  I  S  C  K  I  I  F  L   : G  M  G  K  F  S  S  Q  I  C  L  E  S  Q  Q  *  F  Q  Q  M  Q  G  *  T  D  T  F  C  R  M  K  G  D  Y  L  S  V  I  I  Q  E  V  *  V  G  Y  L  V  N  G  L  C  *  F  K  L  D  K  C  I  E  I  *  G  *  F  L  *  I  F  *  A  M  L  G  *  G  I  N  F  *  V  K  L  K  S  I  L  C  L  F  L  A  L  G  N  R  I  L  L  F  V  H  K  M  K  Q  R  S :   *  H  S  T  L  W  Q  S  I  S  *  V  Y  N  L  E  I  Q  R  Q  R  S  *  K  K  S  T  S  H  L  *  K  E  W  F  L  L  H  *  I  F  Q  E  Q  L  T  E  R  P  Y  S :   L  D  Q  Q  F  L  D  L  L  R  E  K  W  R  R  G  L  R  K  *  T  E  T  K  T  T  F  *  V  G  F  *  R  I  Q  I  S  Q  K  S  K  F  L  I  C  Y  *  V  C  S  L  L  A  M  K  L  H  Q  *  Q  *  L  C  L  F  S  Y  S  K  A  V  L  L  L  F  N  N  *  Q :   K  S  T  W  R  F  P  G  Q  K  N  S  Q  E  K  Q  N  *  I  G  M  T  T  R  K  W  N  S  P  N  V :   L  L  M  R  L  *  D  L  G  M  *  *  G  F  C  T  G  K  L  *  K  M  F  D  I  K  :  V  M  I  F  H  V  D  G  K  C  C  R  *  F  Q  Q  R  I  *  I  L  H  F  S  T  D  L  T  T  L  I  L  G  D  G  R :   T  Q  K  S  R  L  Q  V  K  E  E  A  Q  A  Q  A  A  Q  Q  K  V  V  I  I  S  C  H  L  G  E  V  H  V  Y  V  Q  D  L  N  W  P  N  L  R  W  P  F  S  F  T  I  L  F  L  I  F  T  G  N  *  L  Q  L  I  R  L  L  P  I  L  T  *  I  F  P  M  P  Y  L  S  I  S  N  I  D  R  *  I  N  Y  M  T  S  P  N  S  S  Y  *  N  L  R  S  L  A  H  R  I  V  Y  G  *  T  F  Y  Y  I  V  *  I  K  N  G  S  *  T  N  G  K  E  D  G  T  *  N  D  S  N  Q  K  R  C  F  V  N  L  A  N  Y  L  G  G  E  A  A  A  T  V  F  V  L  S  F  F  F  L  L  Y  L  F  S  C  F  F  F  L  F  S  F  R  Y  V  V  H  N  F  L  C  N  *  I  Q  R  N  Y  S  I  L  R  F  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46312" stop="46589"/>
                    <exon start="46656" stop="46980"/>
                    <exon start="47267" stop="47419"/>
                    <exon start="47525" stop="47761"/>
                    <exon start="47848" stop="47940"/>
                    <exon start="48112" stop="48190"/>
                    <exon start="48302" stop="48408"/>
                    <exon start="50216" stop="50494"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1548</number_coding_nucleotides>
                  <number_encoded_amino_acids>516</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQKQSLLSVETEKEEERNREEGITSMSDLEFFLFLIPPILAVLIILNLFKRKHNFQNLPPGDMGWPFLGETIGYLRPYSATTIGDFMQDHISRYGKIFKSNLFGEPTIVSADAGLNRYILQNEGRLFECNYPRSIGGILGKWSMLVQVGQMHRDMRMISLNFLSNARLRNQLLSEVEKHTLLVLGSWKQDSVVCAQDEAKKLTFNFMAEHIMSLQPGNPETEKLKKEYITFMKGVVSAPLNFPGTAYRKALQSRSTILGFIERKMEERLKEMNRNENDLLGWVLKNSNLSKEQILDLLLSLLFAGHETSSVAIALSIFLLESCPAAVQQLTEEHLEISRAKKQSGETELNWDDYKKMEFTQCVINETLRLGNVVRFLHRKAVKDVRYKGYDIPCGWKVLPVISAAHLDPSLFDRPHDFDPWRWQNAEESPSGKGGSTGTSSTTKSSNNFMPFGGGPRLCAGSELAKLEMAIFIHYLVLNFHWKLAATDQAFAYPYVDFPNALPINIQHRSLNKLHD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="56423" PGL_stop="63521"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="56423" e_stop="56949"/>
            <exon e_start="57389" e_stop="57556"/>
            <exon e_start="58095" e_stop="58182"/>
            <exon e_start="58539" e_stop="58685"/>
            <exon e_start="58874" e_stop="59014"/>
            <exon e_start="59310" e_stop="59395"/>
            <exon e_start="59485" e_stop="59577"/>
            <exon e_start="59673" e_stop="59736"/>
            <exon e_start="59940" e_stop="60083"/>
            <exon e_start="60842" e_stop="61029"/>
            <exon e_start="61144" e_stop="61318"/>
            <exon e_start="61392" e_stop="61562"/>
            <exon e_start="61721" e_stop="61790"/>
            <exon e_start="61885" e_stop="62005"/>
            <exon e_start="62094" e_stop="62131"/>
            <exon e_start="63149" e_stop="63521"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.977" e_score="0.994"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.886" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.500" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.944" acc_prob="0.943" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.895" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.929" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.935" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="56423" e_stop="56949" e_length="527"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.977">
            <gDNA_intron_boundary i_start="56950" i_stop="57388" i_length="439"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="57389" e_stop="57556" e_length="168"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="57557" i_stop="58094" i_length="538"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="58095" e_stop="58182" e_length="88"/>
          </exon>
          <intron i_serial="3" don_prob="0.886" acc_prob="0.944">
            <gDNA_intron_boundary i_start="58183" i_stop="58538" i_length="356"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="58539" e_stop="58685" e_length="147"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.971">
            <gDNA_intron_boundary i_start="58686" i_stop="58873" i_length="188"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="58874" e_stop="59014" e_length="141"/>
          </exon>
          <intron i_serial="5" don_prob="0.500" acc_prob="0.944">
            <gDNA_intron_boundary i_start="59015" i_stop="59309" i_length="295"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="59310" e_stop="59395" e_length="86"/>
          </exon>
          <intron i_serial="6" don_prob="0.944" acc_prob="0.943">
            <gDNA_intron_boundary i_start="59396" i_stop="59484" i_length="89"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="59485" e_stop="59577" e_length="93"/>
          </exon>
          <intron i_serial="7" don_prob="0.991" acc_prob="0.991">
            <gDNA_intron_boundary i_start="59578" i_stop="59672" i_length="95"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="59673" e_stop="59736" e_length="64"/>
          </exon>
          <intron i_serial="8" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="59737" i_stop="59939" i_length="203"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="59940" e_stop="60083" e_length="144"/>
          </exon>
          <intron i_serial="9" don_prob="0.943" acc_prob="0.895">
            <gDNA_intron_boundary i_start="60084" i_stop="60841" i_length="758"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="60842" e_stop="61029" e_length="188"/>
          </exon>
          <intron i_serial="10" don_prob="0.995" acc_prob="0.999">
            <gDNA_intron_boundary i_start="61030" i_stop="61143" i_length="114"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="61144" e_stop="61318" e_length="175"/>
          </exon>
          <intron i_serial="11" don_prob="0.997" acc_prob="0.994">
            <gDNA_intron_boundary i_start="61319" i_stop="61391" i_length="73"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="61392" e_stop="61562" e_length="171"/>
          </exon>
          <intron i_serial="12" don_prob="0.987" acc_prob="0.929">
            <gDNA_intron_boundary i_start="61563" i_stop="61720" i_length="158"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="61721" e_stop="61790" e_length="70"/>
          </exon>
          <intron i_serial="13" don_prob="0.000" acc_prob="0.969">
            <gDNA_intron_boundary i_start="61791" i_stop="61884" i_length="94"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="61885" e_stop="62005" e_length="121"/>
          </exon>
          <intron i_serial="14" don_prob="0.986" acc_prob="1.000">
            <gDNA_intron_boundary i_start="62006" i_stop="62093" i_length="88"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="62094" e_stop="62131" e_length="38"/>
          </exon>
          <intron i_serial="15" don_prob="0.999" acc_prob="0.935">
            <gDNA_intron_boundary i_start="62132" i_stop="63148" i_length="1017"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="63149" e_stop="63521" e_length="373"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56423" stop="56949"/>
              <exon start="57389" stop="57556"/>
              <exon start="58095" stop="58182"/>
              <exon start="58539" stop="58685"/>
              <exon start="58874" stop="59014"/>
              <exon start="59310" stop="59395"/>
              <exon start="59485" stop="59577"/>
              <exon start="59673" stop="59736"/>
              <exon start="59940" stop="60083"/>
              <exon start="60842" stop="61029"/>
              <exon start="61144" stop="61318"/>
              <exon start="61392" stop="61562"/>
              <exon start="61721" stop="61790"/>
              <exon start="61885" stop="62005"/>
              <exon start="62094" stop="62131"/>
              <exon start="63149" stop="63521"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580353" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTCATTTAGAATTTTAAAAGAATGATATTTCATATTTTCTTGCGAAAAAACTTTTTTTTAGGATTTCATTATATTCAGGTTTGGAATATCTCAAAATTAATATTTTTAAAATAAAATTTACACGTTAAACGTAATACTATTATTTTAGGTCTACATAAACATAAATTAATTTTGCGATTAAATTACGGGTTTGTCGTACAGAGCGTGACGGTGGCCGTTTAGTAATATTGGTTAACATTAGGGGTAGTTCCAGTAAAGTGGGAACATAATCGTCAGTCGCCTTATACTTTGTCCCGGTACCCAAAAAAAGAGCATCCCACTTTCACATCCATTTGATTGCTCTACATTGTATTCTGTACTTCTTCATCTATAACTCCATTCAATCTCCGAACAGAATCCGCACCGGCATATTGGTTTCCGATACGTTTCAGAATGTGGCGCTGTGTGTCGCGTGGTCTTCGCGCTTCCTCCAACAGATCTATCTCCGGCGGCGGCCATTTTCGCCGACTCTTCTCCTCACAAACT : AATGTGGGAGGCTCGTCCTACACGGTAGTCGATCACACATATGATGCGGTGGTGGTTGGTGCAGGCGGTGCTGGGCTTCGTGCAGCAATAGGGTTGTCTGAGCATGGATTCAATACTGCTTGCATAACCAAGCTCTTTCCTACTCGATCTCACACTGTTGCAGCTCAG : GGTGGTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG : GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAG : GAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG : GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG : GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAG : GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAG : GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTTGTTTCCAGATCTATGACTATGGAAATTCGAGAAGGGCGTGGTGTAG : GACCTTTGAAGGACCATATCTATCTTCACCTCAATCACTTACCTCCAGAGGTTCTTAAGGAGAGACTTCCGGGTATCTCTGAAACAGCTGCCATTTTCGCTGGTGTTGATGTAACTAAGGAACCAATTCCTGTTTTACCTACCGTGCATTATAATATGGGAGGAATCCCAACTAATTACCATGGACAG : GTGGTCACTAAAAACGGGGATGATCCAGATGCTGTGATCCCTGGACTGATGGCTGCTGGTGAAGCAGCATGCGCATCTGTTCATGGTGCCAATCGTCTTGGTGCAAATTCTCTTCTAGATATTGTTGTTTTTGGACGGGCATGTGCTAATAGGGTTGCAGAGATCCAAAAACCAG : GCGCGGAACAAAAGCCACTTGAAAAAGATGCTGGGGAGAGGACCATTGCATGGTTGGACAAGATTAGGAACTCAAATGGTTCATTGCCCACCTCAAAGATAAGGCTGGACATGCAAAGAGTTATGCAAAACAATGCTGCTGTCTTCCGCACACAAGAGACATTAGAGGAAG : GTTGCCAGCTCATTGACAAAACATGGGAGAGTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG : GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG : AAAAGAGATGATGAGAAGTGGATGAAACACACCATAGG : ATATTGGGAGGACGAGAAAGTTCGGCTAGAATACAGACCAGTGCATATGAACACTCTAGATGACGAAGTCGAGTCGTTCCCACCAAAGGCTCGTGTCTACTGATATACTCATTTATAGGGGGATTTGGATGGCGTAGAAGTTGATAATAAGGAAGGTTGCAATAAATCGCGAAAATTGTGAAATTTTGGTAATAACTGTTTGATTTATTTGTGCGATGAATTGTAAGCAGCCTGTGAAGTGTTCATAAATATTAGAAGCAGAACACCGTTTGTCTTGTAATCAGGAAGCAAGGCTTCCTGACTTTTCGATCTTGTAGAAGATGATGGAATCACTTGTTTATGCTCTTATATACTCTACTTCTTGCATTTTGAC</gDNA_template>
            <first_frame> V  S  F  R  I  L  K  E  *  Y  F  I  F  S  C  E  K  T  F  F  *  D  F  I  I  F  R  F  G  I  S  Q  N  *  Y  F  *  N  K  I  Y  T  L  N  V  I  L  L  F  *  V  Y  I  N  I  N  *  F  C  D  *  I  T  G  L  S  Y  R  A  *  R  W  P  F  S  N  I  G  *  H  *  G  *  F  Q  *  S  G  N  I  I  V  S  R  L  I  L  C  P  G  T  Q  K  K  S  I  P  L  S  H  P  F  D  C  S  T  L  Y  S  V  L  L  H  L  *  L  H  S  I  S  E  Q  N  P  H  R  H  I  G  F  R  Y  V  S  E  C  G  A  V  C  R  V  V  F  A  L  P  P  T  D  L  S  P  A  A  A  I  F  A  D  S  S  P  H  K  L :   M  W  E  A  R  P  T  R  *  S  I  T  H  M  M  R  W  W  L  V  Q  A  V  L  G  F  V  Q  Q  *  G  C  L  S  M  D  S  I  L  L  A  *  P  S  S  F  L  L  D  L  T  L  L  Q  L  R :   V  V  *  M  L  H  *  A  T  *  Q  K  T  I  G  G  G  T  C  M  I  Q  S  K  E  V  I  G  *  :  V  I  R  M  L  S  N  T  C  V  E  K  L  Q  K  Q  L  *  S  L  R  I  M  V  C  L  S  L  E  Q  K  M  V  K  Y  I  N  V  H  L  V  V  K  A  W  T  L  G  K  :  E  D  K  H  I  V  V  H  A  L  Q  I  G  L  G  M  L  Y  C  I  L  F  M  A  R  P  *  S  I  I  H  S  F  L  W  N  I  S  L  W  I  Y  *  *  T  V  M  :  G  A  A  K  V  *  *  H  *  I  W  R  M  V  P  C  I  D  S  V  L  P  I  Q  F  W  P  P  G :   V  M  A  E  L  T  S  R  Q  H  L  L  I  L  A  L  E  M  V  M  L  W  L  R  V  L  G  F  L  F  R :   I  L  S  L  C  N  F  I  Q  L  V  Y  M  G  L  V  A  S  L  L  K  :  D  L  A  V  K  V  V  S  *  G  I  V  R  V  S  D  L  W  K  G  M  P  Q  L  P  R  I  L  P  Q  E  M  L  F  P  D  L  *  L  W  K  F  E  K  G  V  V  *  :  D  L  *  R  T  I  S  I  F  T  S  I  T  Y  L  Q  R  F  L  R  R  D  F  R  V  S  L  K  Q  L  P  F  S  L  V  L  M  *  L  R  N  Q  F  L  F  Y  L  P  C  I  I  I  W  E  E  S  Q  L  I  T  M  D  R :   W  S  L  K  T  G  M  I  Q  M  L  *  S  L  D  *  W  L  L  V  K  Q  H  A  H  L  F  M  V  P  I  V  L  V  Q  I  L  F  *  I  L  L  F  L  D  G  H  V  L  I  G  L  Q  R  S  K  N  Q  :  A  R  N  K  S  H  L  K  K  M  L  G  R  G  P  L  H  G  W  T  R  L  G  T  Q  M  V  H  C  P  P  Q  R  *  G  W  T  C  K  E  L  C  K  T  M  L  L  S  S  A  H  K  R  H  *  R  K  :  V  A  S  S  L  T  K  H  G  R  V  S  M  M  F  S  *  R  T  E  V  *  Y   : G  T  Q  I  L  *  R  L  L  S  W  K  I  F  *  L  M  H  A  S  P  C  T  Q  P  R  Q  E  K  K  A  E  E  L  M  L  V  K  I  L  R :   K  E  M  M  R  S  G  *  N  T  P  *   : D  I  G  R  T  R  K  F  G  *  N  T  D  Q  C  I  *  T  L  *  M  T  K  S  S  R  S  H  Q  R  L  V  S  T  D  I  L  I  Y  R  G  I  W  M  A  *  K  L  I  I  R  K  V  A  I  N  R  E  N  C  E  I  L  V  I  T  V  *  F  I  C  A  M  N  C  K  Q  P  V  K  C  S  *  I  L  E  A  E  H  R  L  S  C  N  Q  E  A  R  L  P  D  F  S  I  L  *  K  M  M  E  S  L  V  Y  A  L  I  Y  S  T  S  C  I  L   </first_frame>
            <second_frame>  F  H  L  E  F  *  K  N  D  I  S  Y  F  L  A  K  K  L  F  F  R  I  S  L  Y  S  G  L  E  Y  L  K  I  N  I  F  K  I  K  F  T  R  *  T  *  Y  Y  Y  F  R  S  T  *  T  *  I  N  F  A  I  K  L  R  V  C  R  T  E  R  D  G  G  R  L  V  I  L  V  N  I  R  G  S  S  S  K  V  G  T  *  S  S  V  A  L  Y  F  V  P  V  P  K  K  R  A  S  H  F  H  I  H  L  I  A  L  H  C  I  L  Y  F  F  I  Y  N  S  I  Q  S  P  N  R  I  R  T  G  I  L  V  S  D  T  F  Q  N  V  A  L  C  V  A  W  S  S  R  F  L  Q  Q  I  Y  L  R  R  R  P  F  S  P  T  L  L  L  T  N   : *  C  G  R  L  V  L  H  G  S  R  S  H  I  *  C  G  G  G  W  C  R  R  C  W  A  S  C  S  N  R  V  V  *  A  W  I  Q  Y  C  L  H  N  Q  A  L  S  Y  S  I  S  H  C  C  S  S   : G  W  Y  K  C  C  I  R  Q  H  D  R  R  R  L  E  V  A  H  V  *  Y  S  Q  R  K  *  L  V  R :   *  S  G  C  Y  P  I  H  V  *  R  S  S  K  S  S  Y  R  A  *  E  L  W  F  A  F  L  S  N  R  R  W  *  N  I  S  T  C  I  W  W  S  K  P  G  L  W  E  R :   R  T  S  I  S  L  C  M  R  C  R  S  D  W  A  C  S  I  A  Y  S  L  W  P  G  H  E  A  *  Y  T  V  F  C  G  I  F  R  F  G  F  T  N  E  Q  *  W :   E  L  P  R  C  N  S  T  K  Y  G  G  W  Y  L  A  S  I  P  C  C  Q  Y  N  F  G  H  R   : G  L  W  P  S  L  L  L  G  N  I  C  S  Y  L  H  W  R  W  *  C  Y  G  C  A  C  W  A  S  S  S   : G  S  *  V  C  A  I  S  S  N  W  Y  I  W  G  W  L  P  H  Y  *  R :   I  S  R  *  R  W  Y  P  E  E  *  *  G  *  A  I  Y  G  K  V  C  P  N  C  Q  G  S  C  L  K  R  C  C  F  Q  I  Y  D  Y  G  N  S  R  R  A  W  C  R :   T  F  E  G  P  Y  L  S  S  P  Q  S  L  T  S  R  G  S  *  G  E  T  S  G  Y  L  *  N  S  C  H  F  R  W  C  *  C  N  *  G  T  N  S  C  F  T  Y  R  A  L  *  Y  G  R  N  P  N  *  L  P  W  T   : G  G  H  *  K  R  G  *  S  R  C  C  D  P  W  T  D  G  C  W  *  S  S  M  R  I  C  S  W  C  Q  S  S  W  C  K  F  S  S  R  Y  C  C  F  W  T  G  M  C  *  *  G  C  R  D  P  K  T  R :   R  G  T  K  A  T  *  K  R  C  W  G  E  D  H  C  M  V  G  Q  D  *  E  L  K  W  F  I  A  H  L  K  D  K  A  G  H  A  K  S  Y  A  K  Q  C  C  C  L  P  H  T  R  D  I  R  G  R :   L  P  A  H  *  Q  N  M  G  E  F  P  *  C  S  V  E  G  Q  R  F  N  M  :  E  H  R  S  Y  R  D  Y  *  V  G  K  S  F  N  *  C  M  H  H  H  A  L  S  R  G  K  K  R  K  Q  R  S  S  C  S  *  R  F  Y   : E  K  R  *  *  E  V  D  E  T  H  H  R  :  I  L  G  G  R  E  S  S  A  R  I  Q  T  S  A  Y  E  H  S  R  *  R  S  R  V  V  P  T  K  G  S  C  L  L  I  Y  S  F  I  G  G  F  G  W  R  R  S  *  *  *  G  R  L  Q  *  I  A  K  I  V  K  F  W  *  *  L  F  D  L  F  V  R  *  I  V  S  S  L  *  S  V  H  K  Y  *  K  Q  N  T  V  C  L  V  I  R  K  Q  G  F  L  T  F  R  S  C  R  R  *  W  N  H  L  F  M  L  L  Y  T  L  L  L  A  F  *  </second_frame>
            <third_frame>   F  I  *  N  F  K  R  M  I  F  H  I  F  L  R  K  N  F  F  L  G  F  H  Y  I  Q  V  W  N  I  S  K  L  I  F  L  K  *  N  L  H  V  K  R  N  T  I  I  L  G  L  H  K  H  K  L  I  L  R  L  N  Y  G  F  V  V  Q  S  V  T  V  A  V  *  *  Y  W  L  T  L  G  V  V  P  V  K  W  E  H  N  R  Q  S  P  Y  T  L  S  R  Y  P  K  K  E  H  P  T  F  T  S  I  *  L  L  Y  I  V  F  C  T  S  S  S  I  T  P  F  N  L  R  T  E  S  A  P  A  Y  W  F  P  I  R  F  R  M  W  R  C  V  S  R  G  L  R  A  S  S  N  R  S  I  S  G  G  G  H  F  R  R  L  F  S  S  Q  T  :  N  V  G  G  S  S  Y  T  V  V  D  H  T  Y  D  A  V  V  V  G  A  G  G  A  G  L  R  A  A  I  G  L  S  E  H  G  F  N  T  A  C  I  T  K  L  F  P  T  R  S  H  T  V  A  A  Q  :  G  G  I  N  A  A  L  G  N  M  T  E  D  D  W  R  W  H  M  Y  D  T  V  K  G  S  D  W  L   : G  D  Q  D  A  I  Q  Y  M  C  R  E  A  P  K  A  V  I  E  L  E  N  Y  G  L  P  F  S  R  T  E  D  G  K  I  Y  Q  R  A  F  G  G  Q  S  L  D  F  G  K   : G  G  Q  A  Y  R  C  A  C  A  A  D  R  T  G  H  A  L  L  H  T  L  Y  G  Q  A  M  K  H  N  T  Q  F  F  V  E  Y  F  A  L  D  L  L  M  N  S  D   : G  S  C  Q  G  V  I  A  L  N  M  E  D  G  T  L  H  R  F  R  A  A  N  T  I  L  A  T  G  :  G  Y  G  R  A  Y  F  S  A  T  S  A  H  T  C  T  G  D  G  N  A  M  V  A  R  A  G  L  P  L  Q  :  D  L  E  F  V  Q  F  H  P  T  G  I  Y  G  A  G  C  L  I  T  E   : G  S  R  G  E  G  G  I  L  R  N  S  E  G  E  R  F  M  E  R  Y  A  P  T  A  K  D  L  A  S  R  D  V  V  S  R  S  M  T  M  E  I  R  E  G  R  G  V   : G  P  L  K  D  H  I  Y  L  H  L  N  H  L  P  P  E  V  L  K  E  R  L  P  G  I  S  E  T  A  A  I  F  A  G  V  D  V  T  K  E  P  I  P  V  L  P  T  V  H  Y  N  M  G  G  I  P  T  N  Y  H  G  Q  :  V  V  T  K  N  G  D  D  P  D  A  V  I  P  G  L  M  A  A  G  E  A  A  C  A  S  V  H  G  A  N  R  L  G  A  N  S  L  L  D  I  V  V  F  G  R  A  C  A  N  R  V  A  E  I  Q  K  P   : G  A  E  Q  K  P  L  E  K  D  A  G  E  R  T  I  A  W  L  D  K  I  R  N  S  N  G  S  L  P  T  S  K  I  R  L  D  M  Q  R  V  M  Q  N  N  A  A  V  F  R  T  Q  E  T  L  E  E   : G  C  Q  L  I  D  K  T  W  E  S  F  H  D  V  Q  L  K  D  R  G  L  I  W :   N  T  D  L  I  E  T  I  E  L  E  N  L  L  I  N  A  C  I  T  M  H  S  A  E  A  R  K  E  S  R  G  A  H  A  R  E  D  F  T  :  K  R  D  D  E  K  W  M  K  H  T  I  G :   Y  W  E  D  E  K  V  R  L  E  Y  R  P  V  H  M  N  T  L  D  D  E  V  E  S  F  P  P  K  A  R  V  Y  *  Y  T  H  L  *  G  D  L  D  G  V  E  V  D  N  K  E  G  C  N  K  S  R  K  L  *  N  F  G  N  N  C  L  I  Y  L  C  D  E  L  *  A  A  C  E  V  F  I  N  I  R  S  R  T  P  F  V  L  *  S  G  S  K  A  S  *  L  F  D  L  V  E  D  D  G  I  T  C  L  C  S  Y  I  L  Y  F  L  H  F  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="56761" stop="56949"/>
                    <exon start="57389" stop="57556"/>
                    <exon start="58095" stop="58182"/>
                    <exon start="58539" stop="58685"/>
                    <exon start="58874" stop="59014"/>
                    <exon start="59310" stop="59395"/>
                    <exon start="59485" stop="59577"/>
                    <exon start="59673" stop="59736"/>
                    <exon start="59940" stop="60083"/>
                    <exon start="60842" stop="61029"/>
                    <exon start="61144" stop="61318"/>
                    <exon start="61392" stop="61562"/>
                    <exon start="61721" stop="61790"/>
                    <exon start="61885" stop="62005"/>
                    <exon start="62094" stop="62131"/>
                    <exon start="63149" stop="63251"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1983</number_coding_nucleotides>
                  <number_encoded_amino_acids>661</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLYIVFCTSSSITPFNLRTESAPAYWFPIRFRMWRCVSRGLRASSNRSISGGGHFRRLFSSQTNVGGSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAANTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGQVVTKNGDDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIQKPGAEQKPLEKDAGERTIAWLDKIRNSNGSLPTSKIRLDMQRVMQNNAAVFRTQETLEEGCQLIDKTWESFHDVQLKDRGLIWNTDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDEKWMKHTIGYWEDEKVRLEYRPVHMNTLDDEVESFPPKARVY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="62291" e_stop="63017"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="62291" e_stop="63017" e_length="727"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62291" stop="63017"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570387" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAGAATCTGTACCTAGTGTGATCTCACAAGTGGAATTTGGAAAGGTGGGGTGTATGCAGACCTTACGCCGACCTTGTTGAGGTAGAAAAGTAGTTTCTGACAGATCCTCGGCTCAAGAAAAGCATGATCTAAAACTGATCTGACAAATACTAAAGTAAAAGCTATAGTGAAAATTTTATGGAAATGAGAAGTAGGGGCAACAAAAACAATAAAGATAGCCTCAGTAAAAGAGACAACAACAAAAATAGCTGAAAAACTGAAGAATAGGATAATAATAATAATAATTCTGATAAGAGGGAGCAAACAAGGTGCTCTAAGCTAGTAGCCTGGAACCATGCTCTCCCGTGGGAAAGAGAGAAATTGCTTGATTACCTACTAACCCCCTCTACCCTGCCTTCATGTTTTCCCATCTTTGGTCATGTTCTCAATGAGCTGAAGATGTGTTATATTATGTCTTAATTGTTTCTCCCCAATTCTTTTTCGGTCTACCTCTACCTCTTGTTGGGCCCATCACTGGCAGCCTCTCTCAAGTCTCACCTCTTCATTGGAACTTTTGTGTTCCTTCTCTCTACATGTCCGAACAATCTCTAATCCTTCCTTCCTGCATCTTTTCTCTCGTAGTGTATCCATACATCCATCATCTCGTGAAATTGATGTAATACTTCAAAAAATTATTTTTTTTTTGTTAAAATAGTATTATCCTTCAAAAATTATTATCCATCGGAA</gDNA_template>
            <first_frame> *  E  S  V  P  S  V  I  S  Q  V  E  F  G  K  V  G  C  M  Q  T  L  R  R  P  C  *  G  R  K  V  V  S  D  R  S  S  A  Q  E  K  H  D  L  K  L  I  *  Q  I  L  K  *  K  L  *  *  K  F  Y  G  N  E  K  *  G  Q  Q  K  Q  *  R  *  P  Q  *  K  R  Q  Q  Q  K  *  L  K  N  *  R  I  G  *  *  *  *  *  F  *  *  E  G  A  N  K  V  L  *  A  S  S  L  E  P  C  S  P  V  G  K  R  E  I  A  *  L  P  T  N  P  L  Y  P  A  F  M  F  S  H  L  W  S  C  S  Q  *  A  E  D  V  L  Y  Y  V  L  I  V  S  P  Q  F  F  F  G  L  P  L  P  L  V  G  P  I  T  G  S  L  S  Q  V  S  P  L  H  W  N  F  C  V  P  S  L  Y  M  S  E  Q  S  L  I  L  P  S  C  I  F  S  L  V  V  Y  P  Y  I  H  H  L  V  K  L  M  *  Y  F  K  K  L  F  F  F  C  *  N  S  I  I  L  Q  K  L  L  S  I  G  </first_frame>
            <second_frame>  E  N  L  Y  L  V  *  S  H  K  W  N  L  E  R  W  G  V  C  R  P  Y  A  D  L  V  E  V  E  K  *  F  L  T  D  P  R  L  K  K  S  M  I  *  N  *  S  D  K  Y  *  S  K  S  Y  S  E  N  F  M  E  M  R  S  R  G  N  K  N  N  K  D  S  L  S  K  R  D  N  N  K  N  S  *  K  T  E  E  *  D  N  N  N  N  N  S  D  K  R  E  Q  T  R  C  S  K  L  V  A  W  N  H  A  L  P  W  E  R  E  K  L  L  D  Y  L  L  T  P  S  T  L  P  S  C  F  P  I  F  G  H  V  L  N  E  L  K  M  C  Y  I  M  S  *  L  F  L  P  N  S  F  S  V  Y  L  Y  L  L  L  G  P  S  L  A  A  S  L  K  S  H  L  F  I  G  T  F  V  F  L  L  S  T  C  P  N  N  L  *  S  F  L  P  A  S  F  L  S  *  C  I  H  T  S  I  I  S  *  N  *  C  N  T  S  K  N  Y  F  F  F  V  K  I  V  L  S  F  K  N  Y  Y  P  S  E </second_frame>
            <third_frame>   R  I  C  T  *  C  D  L  T  S  G  I  W  K  G  G  V  Y  A  D  L  T  P  T  L  L  R  *  K  S  S  F  *  Q  I  L  G  S  R  K  A  *  S  K  T  D  L  T  N  T  K  V  K  A  I  V  K  I  L  W  K  *  E  V  G  A  T  K  T  I  K  I  A  S  V  K  E  T  T  T  K  I  A  E  K  L  K  N  R  I  I  I  I  I  I  L  I  R  G  S  K  Q  G  A  L  S  *  *  P  G  T  M  L  S  R  G  K  E  R  N  C  L  I  T  Y  *  P  P  L  P  C  L  H  V  F  P  S  L  V  M  F  S  M  S  *  R  C  V  I  L  C  L  N  C  F  S  P  I  L  F  R  S  T  S  T  S  C  W  A  H  H  W  Q  P  L  S  S  L  T  S  S  L  E  L  L  C  S  F  S  L  H  V  R  T  I  S  N  P  S  F  L  H  L  F  S  R  S  V  S  I  H  P  S  S  R  E  I  D  V  I  L  Q  K  I  I  F  F  L  L  K  *  Y  Y  P  S  K  I  I  I  H  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62728" stop="62985"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RCVILCLNCFSPILFRSTSTSCWAHHWQPLSSLTSSLELLCSFSLHVRTISNPSFLHLFSRSVSIHPSSREIDVILQKIIFFLLK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62723" stop="62950"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AEDVLYYVLIVSPQFFFGLPLPLVGPITGSLSQVSPLHWNFCVPSLYMSEQSLILPSCIFSLVVYPYIHHLVKLM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="58099" e_stop="58182"/>
            <exon e_start="58539" e_stop="58685"/>
            <exon e_start="58874" e_stop="59014"/>
            <exon e_start="59310" e_stop="59395"/>
            <exon e_start="59485" e_stop="59577"/>
            <exon e_start="59673" e_stop="59736"/>
            <exon e_start="59940" e_stop="60037"/>
            <exon e_start="61751" e_stop="61790"/>
            <exon e_start="61885" e_stop="62005"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.886" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.500" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.944" acc_prob="0.943" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.969" e_score="1.000"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="58099" e_stop="58182" e_length="84"/>
          </exon>
          <intron i_serial="1" don_prob="0.886" acc_prob="0.944">
            <gDNA_intron_boundary i_start="58183" i_stop="58538" i_length="356"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="58539" e_stop="58685" e_length="147"/>
          </exon>
          <intron i_serial="2" don_prob="0.978" acc_prob="0.971">
            <gDNA_intron_boundary i_start="58686" i_stop="58873" i_length="188"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="58874" e_stop="59014" e_length="141"/>
          </exon>
          <intron i_serial="3" don_prob="0.500" acc_prob="0.944">
            <gDNA_intron_boundary i_start="59015" i_stop="59309" i_length="295"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="59310" e_stop="59395" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.944" acc_prob="0.943">
            <gDNA_intron_boundary i_start="59396" i_stop="59484" i_length="89"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="59485" e_stop="59577" e_length="93"/>
          </exon>
          <intron i_serial="5" don_prob="0.991" acc_prob="0.991">
            <gDNA_intron_boundary i_start="59578" i_stop="59672" i_length="95"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="59673" e_stop="59736" e_length="64"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="59737" i_stop="59939" i_length="203"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="59940" e_stop="60037" e_length="98"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="60038" i_stop="61750" i_length="1713"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="61751" e_stop="61790" e_length="40"/>
          </exon>
          <intron i_serial="8" don_prob="0.000" acc_prob="0.969">
            <gDNA_intron_boundary i_start="61791" i_stop="61884" i_length="94"/>
          </intron>
          <exon e_serial="9" e_score="0.983">
            <gDNA_exon_boundary e_start="61885" e_stop="62005" e_length="121"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58099" stop="58182"/>
              <exon start="58539" stop="58685"/>
              <exon start="58874" stop="59014"/>
              <exon start="59310" stop="59395"/>
              <exon start="59485" stop="59577"/>
              <exon start="59673" stop="59736"/>
              <exon start="59940" stop="60037"/>
              <exon start="61751" stop="61790"/>
              <exon start="61885" stop="62005"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592750" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTATAAATGCTGCATTAGGCAACATGACAGAAGACGATTGGAGGTGGCACATGTATGATACAGTCAAAGGAAGTGATTGGTTAG : GTGATCAGGATGCTATCCAATACATGTGTAGAGAAGCTCCAAAAGCAGTTATAGAGCTTGAGAATTATGGTTTGCCTTTCTCTCGAACAGAAGATGGTAAAATATATCAACGTGCATTTGGTGGTCAAAGCCTGGACTTTGGGAAAG : GAGGACAAGCATATCGTTGTGCATGCGCTGCAGATCGGACTGGGCATGCTCTATTGCATACTCTTTATGGCCAGGCCATGAAGCATAATACACAGTTTTTTGTGGAATATTTCGCTTTGGATTTACTAATGAACAGTGATG : GGAGCTGCCAAGGTGTAATAGCACTAAATATGGAGGATGGTACCTTGCATCGATTCCGTGCTGCCAATACAATTTTGGCCACCGGG : GGTTATGGCCGAGCTTACTTCTCGGCAACATCTGCTCATACTTGCACTGGAGATGGTAATGCTATGGTTGCGCGTGCTGGGCTTCCTCTTCAG : GATCTTGAGTTTGTGCAATTTCATCCAACTGGTATATATGGGGCTGGTTGCCTCATTACTGAAG : GATCTCGCGGTGAAGGTGGTATCCTGAGGAATAGTGAGGGTGAGCGATTTATGGAAAGGTATGCCCCAACTGCCAAGGATCTTGCCTCAAGAGATGTT : GTTTCCATGATGTTCAGTTGAAGGACAGAGGTTTAATATG : GAACACAGATCTTATAGAGACTATTGAGTTGGAAAATCTTTTAATTAATGCATGCATCACCATGCACTCAGCCGAGGCAAGAAAAGAAAGCAGAGGAGCTCATGCTCGTGAAGATTTTACG</gDNA_template>
            <first_frame> V  *  M  L  H  *  A  T  *  Q  K  T  I  G  G  G  T  C  M  I  Q  S  K  E  V  I  G  *  :  V  I  R  M  L  S  N  T  C  V  E  K  L  Q  K  Q  L  *  S  L  R  I  M  V  C  L  S  L  E  Q  K  M  V  K  Y  I  N  V  H  L  V  V  K  A  W  T  L  G  K  :  E  D  K  H  I  V  V  H  A  L  Q  I  G  L  G  M  L  Y  C  I  L  F  M  A  R  P  *  S  I  I  H  S  F  L  W  N  I  S  L  W  I  Y  *  *  T  V  M  :  G  A  A  K  V  *  *  H  *  I  W  R  M  V  P  C  I  D  S  V  L  P  I  Q  F  W  P  P  G :   V  M  A  E  L  T  S  R  Q  H  L  L  I  L  A  L  E  M  V  M  L  W  L  R  V  L  G  F  L  F  R :   I  L  S  L  C  N  F  I  Q  L  V  Y  M  G  L  V  A  S  L  L  K  :  D  L  A  V  K  V  V  S  *  G  I  V  R  V  S  D  L  W  K  G  M  P  Q  L  P  R  I  L  P  Q  E  M  L :   F  P  *  C  S  V  E  G  Q  R  F  N  M  :  E  H  R  S  Y  R  D  Y  *  V  G  K  S  F  N  *  C  M  H  H  H  A  L  S  R  G  K  K  R  K  Q  R  S  S  C  S  *  R  F  Y  </first_frame>
            <second_frame>  Y  K  C  C  I  R  Q  H  D  R  R  R  L  E  V  A  H  V  *  Y  S  Q  R  K  *  L  V  R :   *  S  G  C  Y  P  I  H  V  *  R  S  S  K  S  S  Y  R  A  *  E  L  W  F  A  F  L  S  N  R  R  W  *  N  I  S  T  C  I  W  W  S  K  P  G  L  W  E  R :   R  T  S  I  S  L  C  M  R  C  R  S  D  W  A  C  S  I  A  Y  S  L  W  P  G  H  E  A  *  Y  T  V  F  C  G  I  F  R  F  G  F  T  N  E  Q  *  W :   E  L  P  R  C  N  S  T  K  Y  G  G  W  Y  L  A  S  I  P  C  C  Q  Y  N  F  G  H  R   : G  L  W  P  S  L  L  L  G  N  I  C  S  Y  L  H  W  R  W  *  C  Y  G  C  A  C  W  A  S  S  S   : G  S  *  V  C  A  I  S  S  N  W  Y  I  W  G  W  L  P  H  Y  *  R :   I  S  R  *  R  W  Y  P  E  E  *  *  G  *  A  I  Y  G  K  V  C  P  N  C  Q  G  S  C  L  K  R  C   : C  F  H  D  V  Q  L  K  D  R  G  L  I  W :   N  T  D  L  I  E  T  I  E  L  E  N  L  L  I  N  A  C  I  T  M  H  S  A  E  A  R  K  E  S  R  G  A  H  A  R  E  D  F  T </second_frame>
            <third_frame>   I  N  A  A  L  G  N  M  T  E  D  D  W  R  W  H  M  Y  D  T  V  K  G  S  D  W  L   : G  D  Q  D  A  I  Q  Y  M  C  R  E  A  P  K  A  V  I  E  L  E  N  Y  G  L  P  F  S  R  T  E  D  G  K  I  Y  Q  R  A  F  G  G  Q  S  L  D  F  G  K   : G  G  Q  A  Y  R  C  A  C  A  A  D  R  T  G  H  A  L  L  H  T  L  Y  G  Q  A  M  K  H  N  T  Q  F  F  V  E  Y  F  A  L  D  L  L  M  N  S  D   : G  S  C  Q  G  V  I  A  L  N  M  E  D  G  T  L  H  R  F  R  A  A  N  T  I  L  A  T  G  :  G  Y  G  R  A  Y  F  S  A  T  S  A  H  T  C  T  G  D  G  N  A  M  V  A  R  A  G  L  P  L  Q  :  D  L  E  F  V  Q  F  H  P  T  G  I  Y  G  A  G  C  L  I  T  E   : G  S  R  G  E  G  G  I  L  R  N  S  E  G  E  R  F  M  E  R  Y  A  P  T  A  K  D  L  A  S  R  D  V  :  V  S  M  M  F  S  *  R  T  E  V  *  Y   : G  T  Q  I  L  *  R  L  L  S  W  K  I  F  *  L  M  H  A  S  P  C  T  Q  P  R  Q  E  K  K  A  E  E  L  M  L  V  K  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="10" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58101" stop="58182"/>
                    <exon start="58539" stop="58685"/>
                    <exon start="58874" stop="59014"/>
                    <exon start="59310" stop="59395"/>
                    <exon start="59485" stop="59577"/>
                    <exon start="59673" stop="59736"/>
                    <exon start="59940" stop="60037"/>
                    <exon start="61751" stop="61771"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>729</number_coding_nucleotides>
                  <number_encoded_amino_acids>243</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMNSDGSCQGVIALNMEDGTLHRFRAANTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSMMFS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="74624" PGL_stop="76772"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74624" e_stop="76772"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="74624" e_stop="76772" e_length="2149"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74624" stop="76772"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567138" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTTGTCCTCCTTGTAAGGCTGAGCTTTTCTCAATTAAAGCTAAGCACTTCTAACCCCCTTTTCAACTCTCTCCCTCTTCTTGGGGCTACTCTGTTAGTCCACTCAAAACTTGCTCACCAATTTCTTCTTATAACTGTTGTTGTTGAGGTAATGTGTGAGTAGTGTAGCTTAGTAAGATTTGGTGTGGAGAATGGCCTATATGTGTACGGACAGTGGGAATCTAATGGCAATTGCTCAGCAAGTCATAAAGCAAAAGCAGCAGCAGGAGCAGCTCCAACAGCAAGAGCAACAGCAGCAGCAGCAACAACAATTCTTGGGTGTTAATCCTTTGTGTCTCAGCCCATGGACTTCCAATCACCAGACCTTAACTAATAGCCCCACTTTAGGATATGGACTTACCGGGTCGGGTTTTGCAGACCCATTTCAGGTCGCCGGAGGAACAGATAGCGCCGAGCCGGGATTTCAGTTCCCTAACTTGGAACATCATTCGACCGGGTTTAGGTTTGCTGATTTCGGCGGTGGACCGGGTGGTGAGTTTGACTCAGATGAGTGGATGGAGAGCTTGATAGGCGGCGGAGATTCTACCGGAAGCTCTAATCTTCAATCTGGTTGCGAAGCCTGGCAGACGAGTTCCGAATTCACTACCCTCTACGGAGATCCGTTCCCGAGTTGTCCGAATCGACTCAGTATCGGTTCTGCTCCTCCGCCTCCACCTTCTTCCGATCTCAATGGGGTCATTTTTTCGGAAACCCAGAAAAATCTAAGCCCACTACAACCACAGACATCTCCATGGGTCGCACCATCTTCATCTCCTCCTCCAATTGTTCAACCCGCGAGCAAAGAATCCAAGGTGGTATCAGTTGATGTGCAGCCATGTAGTTCCCCTGAAAGTTTTTCGTCAAAACCATTGTTGAAATCCTTGGTGGAATGTGCAAGACTCGCTGAATCAGAGCCTGAAAATGTAGTAAAATCATTGATTCGACTAAGGGAATCAGTTTCCCAACAAGGAGATCCAATGGAGCGAGTTGGGTTCTATTTCTTAGAAGCTCTTTACAATAGGCTTTCGTCGTGTCAAGCAGAGAGAACTCCGTCAATCTTTGGTACTGCGCCGGAGGAGCTCACTTTGTCATACAAAGCCTTTAATGATGCATGTCCCTACTCAAAGTTTGCTCACTTAACGGCTAATCAGGCGATTCTTGAAGCAACTGAAAAAGCAACGAGGATTCACATTGTAGATTTTGGAATTGTTCATGGTATCCAATGGGCAGCTTTTTTACAAGCTTTAGCAACTAGATCAGCTGGTAAACCAGTCAGTGTTAGAATCTCTGGCATTCCATCAGTGGTATTGGGTAACTCTCCGTCAGCTTCACTTTTAGCTACAGGGAATCGTCTTCGTGACTTCGCGAAGCTTCTGGATCTTAACTTCGAATTCGAACCAATATTGACTCCAGTTCAGGAACTTAACGGGTCTAGTTTTCGAGTTGATCCAGATGAAATCTTAGCTGTGAACTTCATGTTGCAGCTGTACAATTTACTGGACGAAACAAATGTTGGTGTAAAAACTGCACTGAGTTTAGCCAAATCATTGAATCCAAGCATTGTGACATTGGGTGAGTATGAGGTGAATTTGAATGATGTTGGATTCCTGCAGCGATTTAAGAACGCACTGAAATACTACTCAACTATTTTCGAGTCATTGGATCCGAGCTTGACCCGAGACTCCGCTGAGAGAGTACAAGTGGAAAGACTGATACTTGGCCGGAGAATTGCCGGAGCGGTGGGCCTAGACGATGGCGGAACCAGAAGAGAATGTATGGAAGATAAAGAACATTGGAAAGAATTAATGGAAGGGGCTGGTTTTAAACCAGTAACACTTAGCCATTATGCAATGAGTCAAGCAAAAATTCTTCTTTGGAACTATAATTATAGTTCATCATTTGGATTAATTGATTCTGCCCCTGGGTTTCTCTCCTTGGCTTGGAAAGATAATCCCCTTTTGACTGTTTCTTCATGGCACTAATTGTGTTCTACATCAGTTCTGTTAGGTACTTTCTTCTAAGTGCTTAAATTTAAATTTCATTGCTCTCTGTAGATTAAAAAGTTAGTATAGAAAGATGATATTTTTGAGCAAGTTTAACTTTGAATTTC</gDNA_template>
            <first_frame> L  C  P  P  C  K  A  E  L  F  S  I  K  A  K  H  F  *  P  P  F  Q  L  S  P  S  S  W  G  Y  S  V  S  P  L  K  T  C  S  P  I  S  S  Y  N  C  C  C  *  G  N  V  *  V  V  *  L  S  K  I  W  C  G  E  W  P  I  C  V  R  T  V  G  I  *  W  Q  L  L  S  K  S  *  S  K  S  S  S  R  S  S  S  N  S  K  S  N  S  S  S  S  N  N  N  S  W  V  L  I  L  C  V  S  A  H  G  L  P  I  T  R  P  *  L  I  A  P  L  *  D  M  D  L  P  G  R  V  L  Q  T  H  F  R  S  P  E  E  Q  I  A  P  S  R  D  F  S  S  L  T  W  N  I  I  R  P  G  L  G  L  L  I  S  A  V  D  R  V  V  S  L  T  Q  M  S  G  W  R  A  *  *  A  A  E  I  L  P  E  A  L  I  F  N  L  V  A  K  P  G  R  R  V  P  N  S  L  P  S  T  E  I  R  S  R  V  V  R  I  D  S  V  S  V  L  L  L  R  L  H  L  L  P  I  S  M  G  S  F  F  R  K  P  R  K  I  *  A  H  Y  N  H  R  H  L  H  G  S  H  H  L  H  L  L  L  Q  L  F  N  P  R  A  K  N  P  R  W  Y  Q  L  M  C  S  H  V  V  P  L  K  V  F  R  Q  N  H  C  *  N  P  W  W  N  V  Q  D  S  L  N  Q  S  L  K  M  *  *  N  H  *  F  D  *  G  N  Q  F  P  N  K  E  I  Q  W  S  E  L  G  S  I  S  *  K  L  F  T  I  G  F  R  R  V  K  Q  R  E  L  R  Q  S  L  V  L  R  R  R  S  S  L  C  H  T  K  P  L  M  M  H  V  P  T  Q  S  L  L  T  *  R  L  I  R  R  F  L  K  Q  L  K  K  Q  R  G  F  T  L  *  I  L  E  L  F  M  V  S  N  G  Q  L  F  Y  K  L  *  Q  L  D  Q  L  V  N  Q  S  V  L  E  S  L  A  F  H  Q  W  Y  W  V  T  L  R  Q  L  H  F  *  L  Q  G  I  V  F  V  T  S  R  S  F  W  I  L  T  S  N  S  N  Q  Y  *  L  Q  F  R  N  L  T  G  L  V  F  E  L  I  Q  M  K  S  *  L  *  T  S  C  C  S  C  T  I  Y  W  T  K  Q  M  L  V  *  K  L  H  *  V  *  P  N  H  *  I  Q  A  L  *  H  W  V  S  M  R  *  I  *  M  M  L  D  S  C  S  D  L  R  T  H  *  N  T  T  Q  L  F  S  S  H  W  I  R  A  *  P  E  T  P  L  R  E  Y  K  W  K  D  *  Y  L  A  G  E  L  P  E  R  W  A  *  T  M  A  E  P  E  E  N  V  W  K  I  K  N  I  G  K  N  *  W  K  G  L  V  L  N  Q  *  H  L  A  I  M  Q  *  V  K  Q  K  F  F  F  G  T  I  I  I  V  H  H  L  D  *  L  I  L  P  L  G  F  S  P  W  L  G  K  I  I  P  F  *  L  F  L  H  G  T  N  C  V  L  H  Q  F  C  *  V  L  S  S  K  C  L  N  L  N  F  I  A  L  C  R  L  K  S  *  Y  R  K  M  I  F  L  S  K  F  N  F  E  F  </first_frame>
            <second_frame>  F  V  L  L  V  R  L  S  F  S  Q  L  K  L  S  T  S  N  P  L  F  N  S  L  P  L  L  G  A  T  L  L  V  H  S  K  L  A  H  Q  F  L  L  I  T  V  V  V  E  V  M  C  E  *  C  S  L  V  R  F  G  V  E  N  G  L  Y  V  Y  G  Q  W  E  S  N  G  N  C  S  A  S  H  K  A  K  A  A  A  G  A  A  P  T  A  R  A  T  A  A  A  A  T  T  I  L  G  C  *  S  F  V  S  Q  P  M  D  F  Q  S  P  D  L  N  *  *  P  H  F  R  I  W  T  Y  R  V  G  F  C  R  P  I  S  G  R  R  R  N  R  *  R  R  A  G  I  S  V  P  *  L  G  T  S  F  D  R  V  *  V  C  *  F  R  R  W  T  G  W  *  V  *  L  R  *  V  D  G  E  L  D  R  R  R  R  F  Y  R  K  L  *  S  S  I  W  L  R  S  L  A  D  E  F  R  I  H  Y  P  L  R  R  S  V  P  E  L  S  E  S  T  Q  Y  R  F  C  S  S  A  S  T  F  F  R  S  Q  W  G  H  F  F  G  N  P  E  K  S  K  P  T  T  T  T  D  I  S  M  G  R  T  I  F  I  S  S  S  N  C  S  T  R  E  Q  R  I  Q  G  G  I  S  *  C  A  A  M  *  F  P  *  K  F  F  V  K  T  I  V  E  I  L  G  G  M  C  K  T  R  *  I  R  A  *  K  C  S  K  I  I  D  S  T  K  G  I  S  F  P  T  R  R  S  N  G  A  S  W  V  L  F  L  R  S  S  L  Q  *  A  F  V  V  S  S  R  E  N  S  V  N  L  W  Y  C  A  G  G  A  H  F  V  I  Q  S  L  *  *  C  M  S  L  L  K  V  C  S  L  N  G  *  S  G  D  S  *  S  N  *  K  S  N  E  D  S  H  C  R  F  W  N  C  S  W  Y  P  M  G  S  F  F  T  S  F  S  N  *  I  S  W  *  T  S  Q  C  *  N  L  W  H  S  I  S  G  I  G  *  L  S  V  S  F  T  F  S  Y  R  E  S  S  S  *  L  R  E  A  S  G  S  *  L  R  I  R  T  N  I  D  S  S  S  G  T  *  R  V  *  F  S  S  *  S  R  *  N  L  S  C  E  L  H  V  A  A  V  Q  F  T  G  R  N  K  C  W  C  K  N  C  T  E  F  S  Q  I  I  E  S  K  H  C  D  I  G  *  V  *  G  E  F  E  *  C  W  I  P  A  A  I  *  E  R  T  E  I  L  L  N  Y  F  R  V  I  G  S  E  L  D  P  R  L  R  *  E  S  T  S  G  K  T  D  T  W  P  E  N  C  R  S  G  G  P  R  R  W  R  N  Q  K  R  M  Y  G  R  *  R  T  L  E  R  I  N  G  R  G  W  F  *  T  S  N  T  *  P  L  C  N  E  S  S  K  N  S  S  L  E  L  *  L  *  F  I  I  W  I  N  *  F  C  P  W  V  S  L  L  G  L  E  R  *  S  P  F  D  C  F  F  M  A  L  I  V  F  Y  I  S  S  V  R  Y  F  L  L  S  A  *  I  *  I  S  L  L  S  V  D  *  K  V  S  I  E  R  *  Y  F  *  A  S  L  T  L  N  F </second_frame>
            <third_frame>   L  S  S  L  *  G  *  A  F  L  N  *  S  *  A  L  L  T  P  F  S  T  L  S  L  F  L  G  L  L  C  *  S  T  Q  N  L  L  T  N  F  F  L  *  L  L  L  L  R  *  C  V  S  S  V  A  *  *  D  L  V  W  R  M  A  Y  M  C  T  D  S  G  N  L  M  A  I  A  Q  Q  V  I  K  Q  K  Q  Q  Q  E  Q  L  Q  Q  Q  E  Q  Q  Q  Q  Q  Q  Q  Q  F  L  G  V  N  P  L  C  L  S  P  W  T  S  N  H  Q  T  L  T  N  S  P  T  L  G  Y  G  L  T  G  S  G  F  A  D  P  F  Q  V  A  G  G  T  D  S  A  E  P  G  F  Q  F  P  N  L  E  H  H  S  T  G  F  R  F  A  D  F  G  G  G  P  G  G  E  F  D  S  D  E  W  M  E  S  L  I  G  G  G  D  S  T  G  S  S  N  L  Q  S  G  C  E  A  W  Q  T  S  S  E  F  T  T  L  Y  G  D  P  F  P  S  C  P  N  R  L  S  I  G  S  A  P  P  P  P  P  S  S  D  L  N  G  V  I  F  S  E  T  Q  K  N  L  S  P  L  Q  P  Q  T  S  P  W  V  A  P  S  S  S  P  P  P  I  V  Q  P  A  S  K  E  S  K  V  V  S  V  D  V  Q  P  C  S  S  P  E  S  F  S  S  K  P  L  L  K  S  L  V  E  C  A  R  L  A  E  S  E  P  E  N  V  V  K  S  L  I  R  L  R  E  S  V  S  Q  Q  G  D  P  M  E  R  V  G  F  Y  F  L  E  A  L  Y  N  R  L  S  S  C  Q  A  E  R  T  P  S  I  F  G  T  A  P  E  E  L  T  L  S  Y  K  A  F  N  D  A  C  P  Y  S  K  F  A  H  L  T  A  N  Q  A  I  L  E  A  T  E  K  A  T  R  I  H  I  V  D  F  G  I  V  H  G  I  Q  W  A  A  F  L  Q  A  L  A  T  R  S  A  G  K  P  V  S  V  R  I  S  G  I  P  S  V  V  L  G  N  S  P  S  A  S  L  L  A  T  G  N  R  L  R  D  F  A  K  L  L  D  L  N  F  E  F  E  P  I  L  T  P  V  Q  E  L  N  G  S  S  F  R  V  D  P  D  E  I  L  A  V  N  F  M  L  Q  L  Y  N  L  L  D  E  T  N  V  G  V  K  T  A  L  S  L  A  K  S  L  N  P  S  I  V  T  L  G  E  Y  E  V  N  L  N  D  V  G  F  L  Q  R  F  K  N  A  L  K  Y  Y  S  T  I  F  E  S  L  D  P  S  L  T  R  D  S  A  E  R  V  Q  V  E  R  L  I  L  G  R  R  I  A  G  A  V  G  L  D  D  G  G  T  R  R  E  C  M  E  D  K  E  H  W  K  E  L  M  E  G  A  G  F  K  P  V  T  L  S  H  Y  A  M  S  Q  A  K  I  L  L  W  N  Y  N  Y  S  S  S  F  G  L  I  D  S  A  P  G  F  L  S  L  A  W  K  D  N  P  L  L  T  V  S  S  W  H  *  L  C  S  T  S  V  L  L  G  T  F  F  *  V  L  K  F  K  F  H  C  S  L  *  I  K  K  L  V  *  K  D  D  I  F  E  Q  V  *  L  *  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74800" stop="76644"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1842</number_coding_nucleotides>
                  <number_encoded_amino_acids>614</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLVWRMAYMCTDSGNLMAIAQQVIKQKQQQEQLQQQEQQQQQQQQFLGVNPLCLSPWTSNHQTLTNSPTLGYGLTGSGFADPFQVAGGTDSAEPGFQFPNLEHHSTGFRFADFGGGPGGEFDSDEWMESLIGGGDSTGSSNLQSGCEAWQTSSEFTTLYGDPFPSCPNRLSIGSAPPPPPSSDLNGVIFSETQKNLSPLQPQTSPWVAPSSSPPPIVQPASKESKVVSVDVQPCSSPESFSSKPLLKSLVECARLAESEPENVVKSLIRLRESVSQQGDPMERVGFYFLEALYNRLSSCQAERTPSIFGTAPEELTLSYKAFNDACPYSKFAHLTANQAILEATEKATRIHIVDFGIVHGIQWAAFLQALATRSAGKPVSVRISGIPSVVLGNSPSASLLATGNRLRDFAKLLDLNFEFEPILTPVQELNGSSFRVDPDEILAVNFMLQLYNLLDETNVGVKTALSLAKSLNPSIVTLGEYEVNLNDVGFLQRFKNALKYYSTIFESLDPSLTRDSAERVQVERLILGRRIAGAVGLDDGGTRRECMEDKEHWKELMEGAGFKPVTLSHYAMSQAKILLWNYNYSSSFGLIDSAPGFLSLAWKDNPLLTVSSWH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="85277" PGL_stop="88491"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85371" e_stop="86297"/>
            <exon e_start="87662" e_stop="87750"/>
            <exon e_start="87864" e_stop="88491"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.868" e_score="1.000"/>
          <exon-intron don_prob="0.946" acc_prob="0.811" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="85371" e_stop="86297" e_length="927"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.868">
            <gDNA_intron_boundary i_start="86298" i_stop="87661" i_length="1364"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="87662" e_stop="87750" e_length="89"/>
          </exon>
          <intron i_serial="2" don_prob="0.946" acc_prob="0.811">
            <gDNA_intron_boundary i_start="87751" i_stop="87863" i_length="113"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="87864" e_stop="88491" e_length="628"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85371" stop="86297"/>
              <exon start="87662" stop="87750"/>
              <exon start="87864" stop="88491"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85371" stop="86076"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596961" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGAGCAGGGTTTGCCCAAAGTAATGTTGATCAGATATACACAGCATGGTGGTTGGGATGAGCCGCCCCTGGTAGAAAGGAGTCTTGATTCGTCGTCTCAGCGAAGCTTGGATCTGATGGCGTAGAAAGGAGTCTTGATTCGTCATCTCAGGGAATCTTGGCTCAGATGGCCAGGGTGTAGATAAACTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCGCGTGGAGAGCAATATCCATTTGAGTATGTTGTTGTATGAAGATATATAGGTGTATAATCGGGATATAGAAGGCCTACTATCAGGGGGTCATGTCCTGTTTATATTACTTTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTAACTTTAATATAAAATGGATTTTTTTGGGGTTTCGAGGGGGGAGATGGCACGGGTTTTTTTTTCTTTTTGGCCCGGGTTCTCTCCCCTCTTGATGTGTGTGTGTTTGTGCCTTTTCTGATTCTTGTTTGCACGTTATGCTCTCATCGTCAGATCAGCAACGAACTATCCTTAATTGGCCGCCCACCGCCCACCGCCCAAATCAGGTATAGGCTAATTAGTTTGAATTTGAACTTGGGCAATTAATTAGACAAAAAACGTAGATAACTACAGGTTTTTTATATGATAGCCAACGGAAGCCACTTAATTTGTATTATCATATATATTGTTGGTAGGTTCTGCTGTTAACGCCGTAGAAGATGATGAATATGACCTTTAAGTTTTGAGTTTTGAACATCTCCAAATCTAACAAAACCAAGCATCTGTTTCTGAAAAATGTGCTTGGGCAAAATCCTGGAGGACTTTAGATGCGCTATTTGGATTCGGGTGCATATCAAGCTCGTAAATATGGTTTGCTCGGATTCCTAATAATTGACGACCTTAG : CCAATATGACATGTTGGATCAGATAATCAATAGTAAGATCTTTGGAACTATCAAATCCTAACTTGTGGAGTCTCTAATTGGAAGATGAG : GGATAAGGGAATGAGCAGACACTTCGAATTAGGCCTGCCATGTAATGTAGGTGCCGAGATTCAACTGATATTTTTGTACCAACATCCAAGGAACCTTATGGAACTGCTTACAGGAACCTTATGGAATTGCTTGCTGAGATGATGACTTGTGAAGAGGATATCGGCTCTGTATAATGCAGTATTTTGTACTTTCCACCTCTTCTGCAAAGATGGATGGGATAACGGTCAATCTGGCAAAGTAAGAATAGATTATTGATCTAATTAGTCAAGGATTAGTGGCCATATTTCAGCGGTATTACCACCAGCTGTAAATGTCATCCAACGACGACTACTAGATTGTTGAAGATTGTAGAGATCCATTCAGGGAGTGGATGAGGCGTTTATTCTGGACCTTGTTGTGTTCAGAAATTTTGAAATACTAGAGGTGATCAGTACTAGCTTAAGGGTAGTCAAAGGAGTACAGATAACCGTATATCATTTCTATTAAGGCGTTACATGCCAATTGTAAATTTAAAATCTTTATATGTGAACGTGAAGCTTTGTGTATTTTCCGTGGAGTATAGGCTTGAACAAACTTGTTTGTTCCTCTAGTGTCCGTGTATTAAAACTTGATTTGTAGTGCTTGGCA</gDNA_template>
            <first_frame> R  S  R  V  C  P  K  *  C  *  S  D  I  H  S  M  V  V  G  M  S  R  P  W  *  K  G  V  L  I  R  R  L  S  E  A  W  I  *  W  R  R  K  E  S  *  F  V  I  S  G  N  L  G  S  D  G  Q  G  V  D  K  L  E  F  L  A  L  L  D  G  F  P  C  R  V  E  S  N  I  H  L  S  M  L  L  Y  E  D  I  *  V  Y  N  R  D  I  E  G  L  L  S  G  G  H  V  L  F  I  L  L  C  Y  C  S  G  L  C  H  V  G  C  A  C  M  A  G  P  *  L  *  Y  K  M  D  F  F  G  V  S  R  G  E  M  A  R  V  F  F  S  F  W  P  G  F  S  P  L  L  M  C  V  C  L  C  L  F  *  F  L  F  A  R  Y  A  L  I  V  R  S  A  T  N  Y  P  *  L  A  A  H  R  P  P  P  K  S  G  I  G  *  L  V  *  I  *  T  W  A  I  N  *  T  K  N  V  D  N  Y  R  F  F  I  *  *  P  T  E  A  T  *  F  V  L  S  Y  I  L  L  V  G  S  A  V  N  A  V  E  D  D  E  Y  D  L  *  V  L  S  F  E  H  L  Q  I  *  Q  N  Q  A  S  V  S  E  K  C  A  W  A  K  S  W  R  T  L  D  A  L  F  G  F  G  C  I  S  S  S  *  I  W  F  A  R  I  P  N  N  *  R  P  *  :  P  I  *  H  V  G  S  D  N  Q  *  *  D  L  W  N  Y  Q  I  L  T  C  G  V  S  N  W  K  M  R :   D  K  G  M  S  R  H  F  E  L  G  L  P  C  N  V  G  A  E  I  Q  L  I  F  L  Y  Q  H  P  R  N  L  M  E  L  L  T  G  T  L  W  N  C  L  L  R  *  *  L  V  K  R  I  S  A  L  Y  N  A  V  F  C  T  F  H  L  F  C  K  D  G  W  D  N  G  Q  S  G  K  V  R  I  D  Y  *  S  N  *  S  R  I  S  G  H  I  S  A  V  L  P  P  A  V  N  V  I  Q  R  R  L  L  D  C  *  R  L  *  R  S  I  Q  G  V  D  E  A  F  I  L  D  L  V  V  F  R  N  F  E  I  L  E  V  I  S  T  S  L  R  V  V  K  G  V  Q  I  T  V  Y  H  F  Y  *  G  V  T  C  Q  L  *  I  *  N  L  Y  M  *  T  *  S  F  V  Y  F  P  W  S  I  G  L  N  K  L  V  C  S  S  S  V  R  V  L  K  L  D  L  *  C  L  A </first_frame>
            <second_frame>  G  A  G  F  A  Q  S  N  V  D  Q  I  Y  T  A  W  W  L  G  *  A  A  P  G  R  K  E  S  *  F  V  V  S  A  K  L  G  S  D  G  V  E  R  S  L  D  S  S  S  Q  G  I  L  A  Q  M  A  R  V  *  I  N  L  N  S  W  R  C  W  M  D  F  P  V  A  W  R  A  I  S  I  *  V  C  C  C  M  K  I  Y  R  C  I  I  G  I  *  K  A  Y  Y  Q  G  V  M  S  C  L  Y  Y  F  V  T  A  L  A  F  A  M  S  G  A  L  A  W  Q  V  P  N  F  N  I  K  W  I  F  L  G  F  R  G  G  R  W  H  G  F  F  F  L  F  G  P  G  S  L  P  S  *  C  V  C  V  C  A  F  S  D  S  C  L  H  V  M  L  S  S  S  D  Q  Q  R  T  I  L  N  W  P  P  T  A  H  R  P  N  Q  V  *  A  N  *  F  E  F  E  L  G  Q  L  I  R  Q  K  T  *  I  T  T  G  F  L  Y  D  S  Q  R  K  P  L  N  L  Y  Y  H  I  Y  C  W  *  V  L  L  L  T  P  *  K  M  M  N  M  T  F  K  F  *  V  L  N  I  S  K  S  N  K  T  K  H  L  F  L  K  N  V  L  G  Q  N  P  G  G  L  *  M  R  Y  L  D  S  G  A  Y  Q  A  R  K  Y  G  L  L  G  F  L  I  I  D  D  L  S :   Q  Y  D  M  L  D  Q  I  I  N  S  K  I  F  G  T  I  K  S  *  L  V  E  S  L  I  G  R  *   : G  I  R  E  *  A  D  T  S  N  *  A  C  H  V  M  *  V  P  R  F  N  *  Y  F  C  T  N  I  Q  G  T  L  W  N  C  L  Q  E  P  Y  G  I  A  C  *  D  D  D  L  *  R  G  Y  R  L  C  I  M  Q  Y  F  V  L  S  T  S  S  A  K  M  D  G  I  T  V  N  L  A  K  *  E  *  I  I  D  L  I  S  Q  G  L  V  A  I  F  Q  R  Y  Y  H  Q  L  *  M  S  S  N  D  D  Y  *  I  V  E  D  C  R  D  P  F  R  E  W  M  R  R  L  F  W  T  L  L  C  S  E  I  L  K  Y  *  R  *  S  V  L  A  *  G  *  S  K  E  Y  R  *  P  Y  I  I  S  I  K  A  L  H  A  N  C  K  F  K  I  F  I  C  E  R  E  A  L  C  I  F  R  G  V  *  A  *  T  N  L  F  V  P  L  V  S  V  Y  *  N  L  I  C  S  A  W   </second_frame>
            <third_frame>   E  Q  G  L  P  K  V  M  L  I  R  Y  T  Q  H  G  G  W  D  E  P  P  L  V  E  R  S  L  D  S  S  S  Q  R  S  L  D  L  M  A  *  K  G  V  L  I  R  H  L  R  E  S  W  L  R  W  P  G  C  R  *  T  *  I  L  G  V  V  G  W  I  S  L  S  R  G  E  Q  Y  P  F  E  Y  V  V  V  *  R  Y  I  G  V  *  S  G  Y  R  R  P  T  I  R  G  S  C  P  V  Y  I  T  L  L  L  L  W  P  L  P  C  R  V  R  L  H  G  R  S  L  T  L  I  *  N  G  F  F  W  G  F  E  G  G  D  G  T  G  F  F  F  F  L  A  R  V  L  S  P  L  D  V  C  V  F  V  P  F  L  I  L  V  C  T  L  C  S  H  R  Q  I  S  N  E  L  S  L  I  G  R  P  P  P  T  A  Q  I  R  Y  R  L  I  S  L  N  L  N  L  G  N  *  L  D  K  K  R  R  *  L  Q  V  F  Y  M  I  A  N  G  S  H  L  I  C  I  I  I  Y  I  V  G  R  F  C  C  *  R  R  R  R  *  *  I  *  P  L  S  F  E  F  *  T  S  P  N  L  T  K  P  S  I  C  F  *  K  M  C  L  G  K  I  L  E  D  F  R  C  A  I  W  I  R  V  H  I  K  L  V  N  M  V  C  S  D  S  *  *  L  T  T  L   : A  N  M  T  C  W  I  R  *  S  I  V  R  S  L  E  L  S  N  P  N  L  W  S  L  *  L  E  D  E  :  G  *  G  N  E  Q  T  L  R  I  R  P  A  M  *  C  R  C  R  D  S  T  D  I  F  V  P  T  S  K  E  P  Y  G  T  A  Y  R  N  L  M  E  L  L  A  E  M  M  T  C  E  E  D  I  G  S  V  *  C  S  I  L  Y  F  P  P  L  L  Q  R  W  M  G  *  R  S  I  W  Q  S  K  N  R  L  L  I  *  L  V  K  D  *  W  P  Y  F  S  G  I  T  T  S  C  K  C  H  P  T  T  T  T  R  L  L  K  I  V  E  I  H  S  G  S  G  *  G  V  Y  S  G  P  C  C  V  Q  K  F  *  N  T  R  G  D  Q  Y  *  L  K  G  S  Q  R  S  T  D  N  R  I  S  F  L  L  R  R  Y  M  P  I  V  N  L  K  S  L  Y  V  N  V  K  L  C  V  F  S  V  E  Y  R  L  E  Q  T  C  L  F  L  *  C  P  C  I  K  T  *  F  V  V  L  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85769" stop="85999"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NGFFWGFEGGDGTGFFFFLARVLSPLDVCVFVPFLILVCTLCSHRQISNELSLIGRPPPTAQIRYRLISLNLNLGN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87698" stop="87750"/>
                    <exon start="87864" stop="88005"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLWNYQILTCGVSNWKMRDKGMSRHFELGLPCNVGAEIQLIFLYQHPRNLMELLTGTLWNCLLR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="86817" e_stop="87211"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="86817" e_stop="87211" e_length="395"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86817" stop="87211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563950" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAATTCTGGCGTTCATTGTGGTGGATGTAATCGGCGGAGGAGAACTCACCCAAAGATCGTGGGATTATGCAATTGAGAAATCGAGCTAGGTTGCGGTTGAGATACTCTGTTCTATTGTTGGCTGCAGACGTACATCAGATATGTATCACGCCCTGGGCTGTGGTTTGGTATAGACACTCTTTTCTGTAGGCCTGTTTTATGATATAGGCAAATCCAGTCAAGTTTTATTTATTGTTCGGTCGTGGTGAAAGGTTTGAAAAAACCGATGTTATGCAGACTTGATAGGGAGAACTACTGGTATGAAAGGGTAATGTCAGGTTTTAGCTTTGCTCAATATGTGCTCGAAACACTTTACGCATGCATAGTTTGTTCATGCTATTGAATTTTTAAAATGT</gDNA_template>
            <first_frame> Q  F  W  R  S  L  W  W  M  *  S  A  E  E  N  S  P  K  D  R  G  I  M  Q  L  R  N  R  A  R  L  R  L  R  Y  S  V  L  L  L  A  A  D  V  H  Q  I  C  I  T  P  W  A  V  V  W  Y  R  H  S  F  L  *  A  C  F  M  I  *  A  N  P  V  K  F  Y  L  L  F  G  R  G  E  R  F  E  K  T  D  V  M  Q  T  *  *  G  E  L  L  V  *  K  G  N  V  R  F  *  L  C  S  I  C  A  R  N  T  L  R  M  H  S  L  F  M  L  L  N  F  *  N   </first_frame>
            <second_frame>  N  S  G  V  H  C  G  G  C  N  R  R  R  R  T  H  P  K  I  V  G  L  C  N  *  E  I  E  L  G  C  G  *  D  T  L  F  Y  C  W  L  Q  T  Y  I  R  Y  V  S  R  P  G  L  W  F  G  I  D  T  L  F  C  R  P  V  L  *  Y  R  Q  I  Q  S  S  F  I  Y  C  S  V  V  V  K  G  L  K  K  P  M  L  C  R  L  D  R  E  N  Y  W  Y  E  R  V  M  S  G  F  S  F  A  Q  Y  V  L  E  T  L  Y  A  C  I  V  C  S  C  Y  *  I  F  K  M  </second_frame>
            <third_frame>   I  L  A  F  I  V  V  D  V  I  G  G  G  E  L  T  Q  R  S  W  D  Y  A  I  E  K  S  S  *  V  A  V  E  I  L  C  S  I  V  G  C  R  R  T  S  D  M  Y  H  A  L  G  C  G  L  V  *  T  L  F  S  V  G  L  F  Y  D  I  G  K  S  S  Q  V  L  F  I  V  R  S  W  *  K  V  *  K  N  R  C  Y  A  D  L  I  G  R  T  T  G  M  K  G  *  C  Q  V  L  A  L  L  N  M  C  S  K  H  F  T  H  A  *  F  V  H  A  I  E  F  L  K  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0215M12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="85277" e_stop="85617"/>
            <exon e_start="85907" e_stop="85959"/>
            <exon e_start="86089" e_stop="86415"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.006" acc_prob="0.797" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.930" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="85277" e_stop="85617" e_length="341"/>
          </exon>
          <intron i_serial="1" don_prob="0.006" acc_prob="0.797">
            <gDNA_intron_boundary i_start="85618" i_stop="85906" i_length="289"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="85907" e_stop="85959" e_length="53"/>
          </exon>
          <intron i_serial="2" don_prob="0.980" acc_prob="0.930">
            <gDNA_intron_boundary i_start="85960" i_stop="86088" i_length="129"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="86089" e_stop="86415" e_length="327"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85277" stop="85617"/>
              <exon start="85907" stop="85959"/>
              <exon start="86089" stop="86415"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596960" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTATCCGCCGCCTCGAAAATAATTCGGTTGACAATCTCTCTGTATATAGCCTTTAATGAGATGGTTTTTCCTCCAGGTAAGTATCGTGTTGCTGAGGAGCAGGGTTTGCCCAAAGTAATGTTGATCAGATATACACAGCATGGTGGTTGGGATGAGCCGCCCCTGGTAGAAAGGAGTCTTGATTCGTCGTCTCAGCGAAGCTTGGATCTGATGGCGTAGAAAGGAGTCTTGATTCGTCATCTCAGGGAATCTTGGCTCAGATGGCCAGGGTGTAGATAAACTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCGCGTGGAGAGCAATATCCATTTGA : ATCAGCAACGAACTATCCTTAATTGGCCGCCCACCGCCCACCGCCCAAATCAG : GTTCTGCTGTTAACGCCGTAGAAGATGATGAATATGACCTTTAAGTTTTGAGTTTTGAACATCTCCAAATCTAACAAAACCAAGCATCTGTTTCTGAAAAATGTGCTTGGGCAAAATCCTGGAGGACTTTAGATGCGCTATTTGGATTCGGGTGCATATCAAGCTCGTAAATATGGTTTGCTCGGATTCCTAATAATTGACGACCTTAGGTACGCATTGTAGGCTTCGCTCGTCTTTTCAGTTGATTTATAATTAAGCATGTGCAGAACAGAAATACTGAAACAATTTTGTGGAATGTTTTTAATTCTATGCTCTCAGAATTTTGAT</gDNA_template>
            <first_frame> L  S  A  A  S  K  I  I  R  L  T  I  S  L  Y  I  A  F  N  E  M  V  F  P  P  G  K  Y  R  V  A  E  E  Q  G  L  P  K  V  M  L  I  R  Y  T  Q  H  G  G  W  D  E  P  P  L  V  E  R  S  L  D  S  S  S  Q  R  S  L  D  L  M  A  *  K  G  V  L  I  R  H  L  R  E  S  W  L  R  W  P  G  C  R  *  T  *  I  L  G  V  V  G  W  I  S  L  S  R  G  E  Q  Y  P  F  E :   S  A  T  N  Y  P  *  L  A  A  H  R  P  P  P  K  S   : G  S  A  V  N  A  V  E  D  D  E  Y  D  L  *  V  L  S  F  E  H  L  Q  I  *  Q  N  Q  A  S  V  S  E  K  C  A  W  A  K  S  W  R  T  L  D  A  L  F  G  F  G  C  I  S  S  S  *  I  W  F  A  R  I  P  N  N  *  R  P  *  V  R  I  V  G  F  A  R  L  F  S  *  F  I  I  K  H  V  Q  N  R  N  T  E  T  I  L  W  N  V  F  N  S  M  L  S  E  F  *  </first_frame>
            <second_frame>  Y  P  P  P  R  K  *  F  G  *  Q  S  L  C  I  *  P  L  M  R  W  F  F  L  Q  V  S  I  V  L  L  R  S  R  V  C  P  K  *  C  *  S  D  I  H  S  M  V  V  G  M  S  R  P  W  *  K  G  V  L  I  R  R  L  S  E  A  W  I  *  W  R  R  K  E  S  *  F  V  I  S  G  N  L  G  S  D  G  Q  G  V  D  K  L  E  F  L  A  L  L  D  G  F  P  C  R  V  E  S  N  I  H  L   : N  Q  Q  R  T  I  L  N  W  P  P  T  A  H  R  P  N  Q  :  V  L  L  L  T  P  *  K  M  M  N  M  T  F  K  F  *  V  L  N  I  S  K  S  N  K  T  K  H  L  F  L  K  N  V  L  G  Q  N  P  G  G  L  *  M  R  Y  L  D  S  G  A  Y  Q  A  R  K  Y  G  L  L  G  F  L  I  I  D  D  L  R  Y  A  L  *  A  S  L  V  F  S  V  D  L  *  L  S  M  C  R  T  E  I  L  K  Q  F  C  G  M  F  L  I  L  C  S  Q  N  F  D </second_frame>
            <third_frame>   I  R  R  L  E  N  N  S  V  D  N  L  S  V  Y  S  L  *  *  D  G  F  S  S  R  *  V  S  C  C  *  G  A  G  F  A  Q  S  N  V  D  Q  I  Y  T  A  W  W  L  G  *  A  A  P  G  R  K  E  S  *  F  V  V  S  A  K  L  G  S  D  G  V  E  R  S  L  D  S  S  S  Q  G  I  L  A  Q  M  A  R  V  *  I  N  L  N  S  W  R  C  W  M  D  F  P  V  A  W  R  A  I  S  I  *  :  I  S  N  E  L  S  L  I  G  R  P  P  P  T  A  Q  I  R :   F  C  C  *  R  R  R  R  *  *  I  *  P  L  S  F  E  F  *  T  S  P  N  L  T  K  P  S  I  C  F  *  K  M  C  L  G  K  I  L  E  D  F  R  C  A  I  W  I  R  V  H  I  K  L  V  N  M  V  C  S  D  S  *  *  L  T  T  L  G  T  H  C  R  L  R  S  S  F  Q  L  I  Y  N  *  A  C  A  E  Q  K  Y  *  N  N  F  V  E  C  F  *  F  Y  A  L  R  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="12" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85277" stop="85495"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSAASKIIRLTISLYIAFNEMVFPPGKYRVAEEQGLPKVMLIRYTQHGGWDEPPLVERSLDSSSQRSLDLMA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="88231" PGL_stop="87447"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88231" e_stop="87447"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="88231" e_stop="87447" e_length="785"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88231" stop="87447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596958" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCCCTGAATGGATCTCTACAATCTTCAACAATCTAGTAGTCGTCGTTGGATGACATTTACAGCTGGTGGTAATACCGCTGAAATATGGCCACTAATCCTTGACTAATTAGATCAATAATCTATTCTTACTTTGCCAGATTGACCGTTATCCCATCCATCTTTGCAGAAGAGGTGGAAAGTACAAAATACTGCATTATACAGAGCCGATATCCTCTTCACAAGTCATCATCTCAGCAAGCAATTCCATAAGGTTCCTGTAAGCAGTTCCATAAGGTTCCTTGGATGTTGGTACAAAAATATCAGTTGAATCTCGGCACCTACATTACATGGCAGGCCTAATTCGAAGTGTCTGCTCATTCCCTTATCCCTTCATGTAACTGATTGTCATTATTTACCACATAAATACTAATACTATATAGAAATAGGTATACACAGACCATCTCAAGAAGTCACTTTGAAATTTCTGATAAATATTCTCACCTCATCTTCCAATTAGAGACTCCACAAGTTAGGATTTGATAGTTCCAAAGATCTTACTATTGATTATCTGATCCAACATGTCATATTGGCTGAAAAGTATATACAGAAGATTCACAAACTTGATCAAGCTGGTAAAAAATTACATCAACCGTAACAGAAGCAAAAGCATATACCTCAATTGGCTGAAAAATATATACAGAATATTCACAAACTTGATCAAACTGGAAGTATAGAATTACATCAACTTTAACAAAAGCAAACGCATTTACATCAGAAGACCACAAAAGGACTTCTACATTCAAAA</gDNA_template>
            <first_frame> L  P  E  W  I  S  T  I  F  N  N  L  V  V  V  V  G  *  H  L  Q  L  V  V  I  P  L  K  Y  G  H  *  S  L  T  N  *  I  N  N  L  F  L  L  C  Q  I  D  R  Y  P  I  H  L  C  R  R  G  G  K  Y  K  I  L  H  Y  T  E  P  I  S  S  S  Q  V  I  I  S  A  S  N  S  I  R  F  L  *  A  V  P  *  G  S  L  D  V  G  T  K  I  S  V  E  S  R  H  L  H  Y  M  A  G  L  I  R  S  V  C  S  F  P  Y  P  F  M  *  L  I  V  I  I  Y  H  I  N  T  N  T  I  *  K  *  V  Y  T  D  H  L  K  K  S  L  *  N  F  *  *  I  F  S  P  H  L  P  I  R  D  S  T  S  *  D  L  I  V  P  K  I  L  L  L  I  I  *  S  N  M  S  Y  W  L  K  S  I  Y  R  R  F  T  N  L  I  K  L  V  K  N  Y  I  N  R  N  R  S  K  S  I  Y  L  N  W  L  K  N  I  Y  R  I  F  T  N  L  I  K  L  E  V  *  N  Y  I  N  F  N  K  S  K  R  I  Y  I  R  R  P  Q  K  D  F  Y  I  Q   </first_frame>
            <second_frame>  S  L  N  G  S  L  Q  S  S  T  I  *  *  S  S  L  D  D  I  Y  S  W  W  *  Y  R  *  N  M  A  T  N  P  *  L  I  R  S  I  I  Y  S  Y  F  A  R  L  T  V  I  P  S  I  F  A  E  E  V  E  S  T  K  Y  C  I  I  Q  S  R  Y  P  L  H  K  S  S  S  Q  Q  A  I  P  *  G  S  C  K  Q  F  H  K  V  P  W  M  L  V  Q  K  Y  Q  L  N  L  G  T  Y  I  T  W  Q  A  *  F  E  V  S  A  H  S  L  I  P  S  C  N  *  L  S  L  F  T  T  *  I  L  I  L  Y  R  N  R  Y  T  Q  T  I  S  R  S  H  F  E  I  S  D  K  Y  S  H  L  I  F  Q  L  E  T  P  Q  V  R  I  *  *  F  Q  R  S  Y  Y  *  L  S  D  P  T  C  H  I  G  *  K  V  Y  T  E  D  S  Q  T  *  S  S  W  *  K  I  T  S  T  V  T  E  A  K  A  Y  T  S  I  G  *  K  I  Y  T  E  Y  S  Q  T  *  S  N  W  K  Y  R  I  T  S  T  L  T  K  A  N  A  F  T  S  E  D  H  K  R  T  S  T  F  K  </second_frame>
            <third_frame>   P  *  M  D  L  Y  N  L  Q  Q  S  S  S  R  R  W  M  T  F  T  A  G  G  N  T  A  E  I  W  P  L  I  L  D  *  L  D  Q  *  S  I  L  T  L  P  D  *  P  L  S  H  P  S  L  Q  K  R  W  K  V  Q  N  T  A  L  Y  R  A  D  I  L  F  T  S  H  H  L  S  K  Q  F  H  K  V  P  V  S  S  S  I  R  F  L  G  C  W  Y  K  N  I  S  *  I  S  A  P  T  L  H  G  R  P  N  S  K  C  L  L  I  P  L  S  L  H  V  T  D  C  H  Y  L  P  H  K  Y  *  Y  Y  I  E  I  G  I  H  R  P  S  Q  E  V  T  L  K  F  L  I  N  I  L  T  S  S  S  N  *  R  L  H  K  L  G  F  D  S  S  K  D  L  T  I  D  Y  L  I  Q  H  V  I  L  A  E  K  Y  I  Q  K  I  H  K  L  D  Q  A  G  K  K  L  H  Q  P  *  Q  K  Q  K  H  I  P  Q  L  A  E  K  Y  I  Q  N  I  H  K  L  D  Q  T  G  S  I  E  L  H  Q  L  *  Q  K  Q  T  H  L  H  Q  K  T  T  K  G  L  L  H  S  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0215M12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="90241" PGL_stop="92250"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90241" e_stop="91034"/>
            <exon e_start="91140" e_stop="92250"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.962" acc_prob="0.703" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90241" e_stop="91034" e_length="794"/>
          </exon>
          <intron i_serial="1" don_prob="0.962" acc_prob="0.703">
            <gDNA_intron_boundary i_start="91035" i_stop="91139" i_length="105"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="91140" e_stop="92250" e_length="1111"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90241" stop="91034"/>
              <exon start="91140" stop="92250"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572228" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATATTTTTCTTCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAG : TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAAATGCTTTGTAGTTTTCTGAGGTTAATGATTTTACTTCTGTTTCAGTTG</gDNA_template>
            <first_frame> I  F  F  F  *  D  S  I  R  R  L  A  N  K  S  V  D  N  L  S  I  Y  S  L  *  L  D  S  F  S  S  H  S  S  L  L  F  R  R  M  S  N  V  D  S  L  S  R  L  L  G  S  R  V  V  L  P  K  V  L  S  I  R  Y  E  Q  R  D  G  S  N  D  P  P  L  V  V  R  S  L  D  S  S  S  Q  G  *  D  G  V  E  R  S  L  D  T  S  S  Q  G  I  L  A  Q  I  V  *  R  R  V  L  I  R  H  L  K  E  S  W  L  R  W  L  G  C  Q  M  N  L  N  S  W  R  C  W  M  D  F  P  V  I  I  R  S  V  E  S  N  T  H  R  K  L  L  L  Y  E  D  V  *  R  Y  R  W  G  I  K  A  L  I  S  G  V  M  S  R  F  K  L  P  C  Y  C  S  G  L  C  H  V  G  C  A  C  M  A  G  P  Y  I  *  Y  K  L  D  F  S  G  F  *  G  G  D  S  T  D  F  F  F  W  P  G  I  S  P  L  L  V  C  V  C  V  L  C  L  L  *  F  L  F  A  R  Y  A  L  H  R  Q  I  S  S  L  S  T  S  Y  P  *  F  A  A  H  P  N  V  S :   Q  G  R  R  R  L  *  R  *  T  F  K  I  E  H  R  F  H  Q  C  *  Q  L  Q  I  *  C  T  I  C  G  Q  N  L  L  G  F  R  Y  A  *  *  A  R  N  Y  G  C  L  D  S  *  *  *  T  S  G  M  L  R  G  C  L  S  L  I  *  F  M  I  K  H  V  Q  N  K  N  T  E  L  I  C  G  V  G  E  R  F  Q  L  C  T  S  E  I  L  I  *  K  I  F  T  V  H  T  L  R  Y  L  N  S  *  I  L  T  H  P  N  W  C  P  A  R  F  N  Y  K  K  L  R  T  E  I  Y  K  F  S  A  C  *  C  Q  L  S  L  F  A  R  V  V  V  A  L  H  Y  I  H  S  W  A  R  R  S  Y  *  I  A  V  L  Q  I  F  S  *  *  A  I  C  I  *  I  P  N  L  R  F  A  F  K  F  Q  T  L  I  A  L  Q  I  W  Y  *  T  G  G  I  M  L  I  Q  L  G  A  E  D  A  C  R  N  F  C  G  S  E  K  F  *  *  *  W  E  E  N  F  G  Y  G  H  L  W  H  Y  S  T  L  A  F  I  C  S  I  D  T  L  H  I  H  N  L  F  M  L  L  C  C  Y  M  M  Y  I  P  *  S  L  E  F  G  C  T  G  P  L  L  H  F  S  G  Y  M  L  C  H  V  S  T  D  W  L  S  F  F  F  L  *  I  S  G  *  D  I  *  V  S  F  Y  D  V  K  *  S  G  I  F  E  C  V  L  F  G  L  V  T  I  C  L  C  I  F  S  F  G  R  G  C  M  F  *  Y  M  K  L  K  S  A  E  M  L  C  S  F  L  R  L  M  I  L  L  L  F  Q  L </first_frame>
            <second_frame>  Y  F  S  S  R  I  L  S  A  A  S  Q  I  S  R  L  T  I  S  L  Y  I  A  C  N  *  I  V  S  P  V  I  L  A  F  F  S  A  G  *  V  T  W  I  P  *  A  G  C  W  G  A  G  S  F  C  P  K  Y  C  R  S  G  M  N  S  V  M  A  R  M  I  R  P  W  *  *  G  V  L  I  R  H  L  R  A  E  M  A  *  K  G  V  L  I  R  L  H  K  E  S  W  L  R  L  C  R  G  E  S  *  F  V  I  S  R  N  L  G  S  D  G  *  G  A  R  *  I  *  I  L  G  V  V  G  W  I  S  L  S  *  S  E  A  S  R  A  I  P  I  G  S  C  C  C  M  K  M  Y  R  G  I  G  G  A  *  K  P  *  Y  Q  G  *  C  P  V  L  N  Y  P  V  T  A  L  A  F  A  M  S  G  A  L  A  W  Q  V  P  I  F  N  I  N  W  I  F  R  G  F  E  G  E  I  A  R  I  F  F  F  G  P  G  S  L  P  S  W  C  V  C  V  F  Y  A  F  S  D  S  C  L  H  V  M  L  C  I  V  R  S  A  V  S  Q  R  A  I  L  N  L  P  P  T  Q  M  *   : V  K  A  E  E  D  Y  E  G  E  R  S  R  L  N  I  D  F  I  S  A  N  N  S  K  S  S  A  L  S  V  D  K  I  Y  S  D  S  D  M  H  N  R  L  V  I  M  V  A  W  I  P  N  N  R  P  Q  V  C  F  V  D  A  C  P  *  F  D  L  *  *  S  M  C  R  T  K  I  L  N  *  F  V  V  L  E  N  V  S  N  S  A  L  P  K  F  *  F  R  K  F  L  L  Y  I  H  C  D  T  *  I  P  R  Y  *  R  I  L  T  G  V  L  Q  D  S  I  I  R  N  *  E  L  K  Y  I  S  S  L  P  A  D  V  N  *  V  S  L  R  E  W  L  L  L  F  I  T  F  I  V  G  P  E  G  A  T  E  L  R  F  F  K  Y  L  V  D  K  R  F  A  F  K  Y  Q  I  S  D  L  H  L  N  S  K  P  *  S  L  C  K  Y  G  T  E  L  A  G  *  C  L  F  N  L  E  R  K  M  H  A  E  I  F  V  V  V  R  N  F  D  N  S  G  K  K  I  L  A  M  V  I  F  G  I  T  Q  L  W  R  L  F  A  Q  S  T  L  C  T  Y  T  I  C  S  C  Y  Y  A  V  T  *  C  T  Y  L  E  A  *  N  L  G  A  Q  A  L  C  Y  T  F  P  V  I  C  F  A  M  L  A  L  T  G  F  L  S  F  S  C  K  Y  P  V  E  I  F  R  C  L  S  M  M  *  S  D  P  A  F  S  S  V  S  C  L  D  L  *  Q  F  V  Y  V  S  L  V  L  A  E  D  V  C  F  D  T  *  S  L  K  V  Q  K  C  F  V  V  F  *  G  *  *  F  Y  F  C  F  S   </second_frame>
            <third_frame>   I  F  L  L  G  F  Y  P  P  P  R  K  *  V  G  *  Q  S  L  Y  I  *  P  V  I  R  *  F  L  Q  S  F  *  P  S  F  P  P  D  E  *  R  G  F  L  K  Q  V  A  G  E  Q  G  R  F  A  Q  S  I  V  D  Q  V  *  T  A  *  W  L  E  *  S  A  P  G  S  K  E  S  *  F  V  I  S  G  L  R  W  R  R  K  E  S  *  Y  V  F  T  R  N  L  G  S  D  C  V  E  E  S  L  D  S  S  S  Q  G  I  L  A  Q  M  A  R  V  P  D  E  F  E  F  L  A  L  L  D  G  F  P  C  H  N  Q  K  R  R  E  Q  Y  P  *  E  V  V  V  V  *  R  C  I  E  V  *  V  G  H  K  S  P  N  I  R  G  D  V  P  F  *  I  T  L  L  L  L  W  P  L  P  C  R  V  R  L  H  G  R  S  L  Y  L  I  *  I  G  F  F  G  V  L  R  G  R  *  H  G  F  F  F  L  A  R  D  L  S  P  L  G  V  C  V  C  F  M  P  S  L  I  L  V  C  T  L  C  S  A  S  S  D  Q  Q  S  L  N  E  L  S  L  I  C  R  P  P  K  C  K  :  S  R  Q  K  K  I  M  K  V  N  V  Q  D  *  T  S  I  S  S  V  L  T  T  P  N  L  V  H  Y  L  W  T  K  S  T  R  I  Q  I  C  I  I  G  S  *  L  W  L  L  G  F  L  I  I  D  L  R  Y  A  S  W  M  L  V  L  D  L  I  Y  D  K  A  C  A  E  Q  K  Y  *  T  N  L  W  C  W  R  T  F  P  T  L  H  F  R  N  F  D  L  E  N  F  Y  C  T  Y  T  A  I  L  E  F  L  D  I  D  A  S  *  L  V  S  C  K  I  Q  L  *  E  T  E  N  *  N  I  *  V  L  C  L  L  M  S  I  K  S  L  C  A  S  G  C  C  S  S  L  H  S  *  L  G  Q  K  E  L  L  N  C  G  S  S  N  I  *  L  I  S  D  L  H  L  N  T  K  S  Q  I  C  I  *  I  P  N  L  N  R  F  A  N  M  V  L  N  W  R  D  N  A  Y  S  T  W  S  G  R  C  M  Q  K  F  L  W  *  *  E  I  L  I  I  V  G  R  K  F  W  L  W  S  S  L  A  L  L  N  S  G  V  Y  L  L  N  R  H  S  A  H  T  Q  S  V  H  A  I  M  L  L  H  D  V  H  T  L  K  L  R  I  W  V  H  R  P  F  V  T  L  F  R  L  Y  A  L  P  C  *  H  *  L  A  F  F  L  F  P  V  N  I  R  L  R  Y  L  G  V  F  L  *  C  E  V  I  R  H  F  R  V  C  P  V  W  T  C  N  N  L  F  M  Y  L  *  F  W  Q  R  M  Y  V  L  I  H  E  A  *  K  C  R  N  A  L  *  F  S  E  V  N  D  F  T  S  V  S  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90761" stop="91033"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CPVLNYPVTALAFAMSGALAWQVPIFNINWIFRGFEGEIARIFFFGPGSLPSWCVCVFYAFSDSCLHVMLCIVRSAVSQRAILNLPPTQM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91809" stop="92018"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EILIIVGRKFWLWSSLALLNSGVYLLNRHSAHTQSVHAIMLLHDVHTLKLRIWVHRPFVTLFRLYALPC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91034" stop="91336"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKAEEDYEGERSRLNIDFISANNSKSSALSVDKIYSDSDMHNRLVIMVAWIPNNRPQVCFVDACP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90879" stop="91034"/>
                    <exon start="91140" stop="91181"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HGFFFLARDLSPLGVCVCFMPSLILVCTLCSASSDQQSLNELSLICRPPKCKSRQKKIMKVNVQD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="90896" e_stop="91490"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="90896" e_stop="91490" e_length="595"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90896" stop="91490"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572226" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAGGTACAGGCTAATTAGATAGCATTTGAACTTTGCAATTAATTAGACTAAAAAAACCCAGATAGCTAGTTTTTTGCAATTATCATATAGTATTGGTAGTTTGTGCAGTCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCC</gDNA_template>
            <first_frame> G  P  G  S  L  P  S  W  C  V  C  V  F  Y  A  F  S  D  S  C  L  H  V  M  L  C  I  V  R  S  A  V  S  Q  R  A  I  L  N  L  P  P  T  Q  M  *  G  T  G  *  L  D  S  I  *  T  L  Q  L  I  R  L  K  K  P  R  *  L  V  F  C  N  Y  H  I  V  L  V  V  C  A  V  K  A  E  E  D  Y  E  G  E  R  S  R  L  N  I  D  F  I  S  A  N  N  S  K  S  S  A  L  S  V  D  K  I  Y  S  D  S  D  M  H  N  R  L  V  I  M  V  A  W  I  P  N  N  R  P  Q  V  C  F  V  D  A  C  P  *  F  D  L  *  *  S  M  C  R  T  K  I  L  N  *  F  V  V  L  E  N  V  S  N  S  A  L  P  K  F  *  F  R  K  F  L  L  Y  I  H  C  D  T  *  I  P  R  Y  *  R  I  </first_frame>
            <second_frame>  A  R  D  L  S  P  L  G  V  C  V  C  F  M  P  S  L  I  L  V  C  T  L  C  S  A  S  S  D  Q  Q  S  L  N  E  L  S  L  I  C  R  P  P  K  C  K  V  Q  A  N  *  I  A  F  E  L  C  N  *  L  D  *  K  N  P  D  S  *  F  F  A  I  I  I  *  Y  W  *  F  V  Q  S  R  Q  K  K  I  M  K  V  N  V  Q  D  *  T  S  I  S  S  V  L  T  T  P  N  L  V  H  Y  L  W  T  K  S  T  R  I  Q  I  C  I  I  G  S  *  L  W  L  L  G  F  L  I  I  D  L  R  Y  A  S  W  M  L  V  L  D  L  I  Y  D  K  A  C  A  E  Q  K  Y  *  T  N  L  W  C  W  R  T  F  P  T  L  H  F  R  N  F  D  L  E  N  F  Y  C  T  Y  T  A  I  L  E  F  L  D  I  D  A  S </second_frame>
            <third_frame>   P  G  I  S  P  L  L  V  C  V  C  V  L  C  L  L  *  F  L  F  A  R  Y  A  L  H  R  Q  I  S  S  L  S  T  S  Y  P  *  F  A  A  H  P  N  V  R  Y  R  L  I  R  *  H  L  N  F  A  I  N  *  T  K  K  T  Q  I  A  S  F  L  Q  L  S  Y  S  I  G  S  L  C  S  Q  G  R  R  R  L  *  R  *  T  F  K  I  E  H  R  F  H  Q  C  *  Q  L  Q  I  *  C  T  I  C  G  Q  N  L  L  G  F  R  Y  A  *  *  A  R  N  Y  G  C  L  D  S  *  *  *  T  S  G  M  L  R  G  C  L  S  L  I  *  F  M  I  K  H  V  Q  N  K  N  T  E  L  I  C  G  V  G  E  R  F  Q  L  C  T  S  E  I  L  I  *  K  I  F  T  V  H  T  L  R  Y  L  N  S  *  I  L  T  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91097" stop="91336"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVFCNYHIVLVVCAVKAEEDYEGERSRLNIDFISANNSKSSALSVDKIYSDSDMHNRLVIMVAWIPNNRPQVCFVDACP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="90254" e_stop="90722"/>
            <exon e_start="90982" e_stop="91029"/>
            <exon e_start="91140" e_stop="92202"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.451" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.703" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90254" e_stop="90722" e_length="469"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.451">
            <gDNA_intron_boundary i_start="90723" i_stop="90981" i_length="259"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="90982" e_stop="91029" e_length="48"/>
          </exon>
          <intron i_serial="2" don_prob="0.975" acc_prob="0.703">
            <gDNA_intron_boundary i_start="91030" i_stop="91139" i_length="110"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="91140" e_stop="92202" e_length="1063"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90254" stop="90722"/>
              <exon start="90982" stop="91029"/>
              <exon start="91140" stop="92202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572227" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAG : ATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAAT : TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAGGTATGCTTCGTGGATGCTTGTCCTTGATTTGATTTATGATAAAGCATGTGCAGAACAAAAATACTGAACTAATTTGTGGTGTTGGAGAACGTTTCCAACTCTGCACTTCCGAAATTTTGATTTAGAAAATTTTTACTGTACATACACTGCGATACTTGAATTCCTAGATATTGACGCATCCTAACTGGTGTCCTGCAAGATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATGCTGTTACATGATGTACATACCTTGAAGCTTAGAATTTGGGTGCACAGGCCCTTTGTTACACTTTTCCGGTTATATGCTTTGCCATGTTAGCACTGACTGGCTTTCTTTCTTTTTCCTGTAAATATCCGGTTGAGATATTTAGGTGTCTTTCTATGATGTGAAGTGATCCGGCATTTTCGAGTGTGTCCTGTTTGGACTTGTAACAATTTGTTTATGTATCTTTAGTTTTGGCAGAGGATGTATGTTTTGATACATGAAGCTTAAAAGTGCAGAA</gDNA_template>
            <first_frame> R  I  L  S  A  A  S  Q  I  S  R  L  T  I  S  L  Y  I  A  C  N  *  I  V  S  P  V  I  L  A  F  F  S  A  G  *  V  T  W  I  P  *  A  G  C  W  G  A  G  S  F  C  P  K  Y  C  R  S  G  M  N  S  V  M  A  R  M  I  R  P  W  *  *  G  V  L  I  R  H  L  R  A  E  M  A  *  K  G  V  L  I  R  L  H  K  E  S  W  L  R  L  C  R  G  E  S  *  F  V  I  S  R  N  L  G  S  D  G  *  G  A  R  *  I  *  I  L  G  V  V  G  W  I  S  L  S  *  S  E  A  S  R  A  I  P  I  G  S  C  C  C  M  K  M  Y  R   : D  Q  Q  S  L  N  E  L  S  L  I  C  R  P  P  K   : F  K  A  E  E  D  Y  E  G  E  R  S  R  L  N  I  D  F  I  S  A  N  N  S  K  S  S  A  L  S  V  D  K  I  Y  S  D  S  D  M  H  N  R  L  V  I  M  V  A  W  I  P  N  N  R  P  Q  V  C  F  V  D  A  C  P  *  F  D  L  *  *  S  M  C  R  T  K  I  L  N  *  F  V  V  L  E  N  V  S  N  S  A  L  P  K  F  *  F  R  K  F  L  L  Y  I  H  C  D  T  *  I  P  R  Y  *  R  I  L  T  G  V  L  Q  D  S  I  I  R  N  *  E  L  K  Y  I  S  S  L  P  A  D  V  N  *  V  S  L  R  E  W  L  L  L  F  I  T  F  I  V  G  P  E  G  A  T  E  L  R  F  F  K  Y  L  V  D  K  R  F  A  F  K  Y  Q  I  S  D  L  H  L  N  S  K  P  *  S  L  C  K  Y  G  T  E  L  A  G  *  C  L  F  N  L  E  R  K  M  H  A  E  I  F  V  V  V  R  N  F  D  N  S  G  K  K  I  L  A  M  V  I  F  G  I  T  Q  L  W  R  L  F  A  Q  S  T  L  C  T  Y  T  I  C  S  C  Y  Y  A  V  T  *  C  T  Y  L  E  A  *  N  L  G  A  Q  A  L  C  Y  T  F  P  V  I  C  F  A  M  L  A  L  T  G  F  L  S  F  S  C  K  Y  P  V  E  I  F  R  C  L  S  M  M  *  S  D  P  A  F  S  S  V  S  C  L  D  L  *  Q  F  V  Y  V  S  L  V  L  A  E  D  V  C  F  D  T  *  S  L  K  V  Q   </first_frame>
            <second_frame>  G  F  Y  P  P  P  R  K  *  V  G  *  Q  S  L  Y  I  *  P  V  I  R  *  F  L  Q  S  F  *  P  S  F  P  P  D  E  *  R  G  F  L  K  Q  V  A  G  E  Q  G  R  F  A  Q  S  I  V  D  Q  V  *  T  A  *  W  L  E  *  S  A  P  G  S  K  E  S  *  F  V  I  S  G  L  R  W  R  R  K  E  S  *  Y  V  F  T  R  N  L  G  S  D  C  V  E  E  S  L  D  S  S  S  Q  G  I  L  A  Q  M  A  R  V  P  D  E  F  E  F  L  A  L  L  D  G  F  P  C  H  N  Q  K  R  R  E  Q  Y  P  *  E  V  V  V  V  *  R  C  I  E  :  I  S  S  L  S  T  S  Y  P  *  F  A  A  H  P  N  :  S  R  Q  K  K  I  M  K  V  N  V  Q  D  *  T  S  I  S  S  V  L  T  T  P  N  L  V  H  Y  L  W  T  K  S  T  R  I  Q  I  C  I  I  G  S  *  L  W  L  L  G  F  L  I  I  D  L  R  Y  A  S  W  M  L  V  L  D  L  I  Y  D  K  A  C  A  E  Q  K  Y  *  T  N  L  W  C  W  R  T  F  P  T  L  H  F  R  N  F  D  L  E  N  F  Y  C  T  Y  T  A  I  L  E  F  L  D  I  D  A  S  *  L  V  S  C  K  I  Q  L  *  E  T  E  N  *  N  I  *  V  L  C  L  L  M  S  I  K  S  L  C  A  S  G  C  C  S  S  L  H  S  *  L  G  Q  K  E  L  L  N  C  G  S  S  N  I  *  L  I  S  D  L  H  L  N  T  K  S  Q  I  C  I  *  I  P  N  L  N  R  F  A  N  M  V  L  N  W  R  D  N  A  Y  S  T  W  S  G  R  C  M  Q  K  F  L  W  *  *  E  I  L  I  I  V  G  R  K  F  W  L  W  S  S  L  A  L  L  N  S  G  V  Y  L  L  N  R  H  S  A  H  T  Q  S  V  H  A  I  M  L  L  H  D  V  H  T  L  K  L  R  I  W  V  H  R  P  F  V  T  L  F  R  L  Y  A  L  P  C  *  H  *  L  A  F  F  L  F  P  V  N  I  R  L  R  Y  L  G  V  F  L  *  C  E  V  I  R  H  F  R  V  C  P  V  W  T  C  N  N  L  F  M  Y  L  *  F  W  Q  R  M  Y  V  L  I  H  E  A  *  K  C  R  </second_frame>
            <third_frame>   D  S  I  R  R  L  A  N  K  S  V  D  N  L  S  I  Y  S  L  *  L  D  S  F  S  S  H  S  S  L  L  F  R  R  M  S  N  V  D  S  L  S  R  L  L  G  S  R  V  V  L  P  K  V  L  S  I  R  Y  E  Q  R  D  G  S  N  D  P  P  L  V  V  R  S  L  D  S  S  S  Q  G  *  D  G  V  E  R  S  L  D  T  S  S  Q  G  I  L  A  Q  I  V  *  R  R  V  L  I  R  H  L  K  E  S  W  L  R  W  L  G  C  Q  M  N  L  N  S  W  R  C  W  M  D  F  P  V  I  I  R  S  V  E  S  N  T  H  R  K  L  L  L  Y  E  D  V  *  R :   S  A  V  S  Q  R  A  I  L  N  L  P  P  T  Q  I :   Q  G  R  R  R  L  *  R  *  T  F  K  I  E  H  R  F  H  Q  C  *  Q  L  Q  I  *  C  T  I  C  G  Q  N  L  L  G  F  R  Y  A  *  *  A  R  N  Y  G  C  L  D  S  *  *  *  T  S  G  M  L  R  G  C  L  S  L  I  *  F  M  I  K  H  V  Q  N  K  N  T  E  L  I  C  G  V  G  E  R  F  Q  L  C  T  S  E  I  L  I  *  K  I  F  T  V  H  T  L  R  Y  L  N  S  *  I  L  T  H  P  N  W  C  P  A  R  F  N  Y  K  K  L  R  T  E  I  Y  K  F  S  A  C  *  C  Q  L  S  L  F  A  R  V  V  V  A  L  H  Y  I  H  S  W  A  R  R  S  Y  *  I  A  V  L  Q  I  F  S  *  *  A  I  C  I  *  I  P  N  L  R  F  A  F  K  F  Q  T  L  I  A  L  Q  I  W  Y  *  T  G  G  I  M  L  I  Q  L  G  A  E  D  A  C  R  N  F  C  G  S  E  K  F  *  *  *  W  E  E  N  F  G  Y  G  H  L  W  H  Y  S  T  L  A  F  I  C  S  I  D  T  L  H  I  H  N  L  F  M  L  L  C  C  Y  M  M  Y  I  P  *  S  L  E  F  G  C  T  G  P  L  L  H  F  S  G  Y  M  L  C  H  V  S  T  D  W  L  S  F  F  F  L  *  I  S  G  *  D  I  *  V  S  F  Y  D  V  K  *  S  G  I  F  E  C  V  L  F  G  L  V  T  I  C  L  C  I  F  S  F  G  R  G  C  M  F  *  Y  M  K  L  K  S  A  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90665" stop="90722"/>
                    <exon start="90982" stop="91029"/>
                    <exon start="91140" stop="91336"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>300</number_coding_nucleotides>
                  <number_encoded_amino_acids>100</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SEASRAIPIGSCCCMKMYRDQQSLNELSLICRPPKFKAEEDYEGERSRLNIDFISANNSKSSALSVDKIYSDSDMHNRLVIMVAWIPNNRPQVCFVDACP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91809" stop="92018"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EILIIVGRKFWLWSSLALLNSGVYLLNRHSAHTQSVHAIMLLHDVHTLKLRIWVHRPFVTLFRLYALPC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="90251" e_stop="91034"/>
            <exon e_start="91140" e_stop="91309"/>
            <exon e_start="91509" e_stop="91928"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.962" acc_prob="0.703" e_score="0.954"/>
          <exon-intron don_prob="0.968" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.954">
            <gDNA_exon_boundary e_start="90251" e_stop="91034" e_length="784"/>
          </exon>
          <intron i_serial="1" don_prob="0.962" acc_prob="0.703">
            <gDNA_intron_boundary i_start="91035" i_stop="91139" i_length="105"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="91140" e_stop="91309" e_length="170"/>
          </exon>
          <intron i_serial="2" don_prob="0.968" acc_prob="0.000">
            <gDNA_intron_boundary i_start="91310" i_stop="91508" i_length="199"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="91509" e_stop="91928" e_length="420"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90251" stop="91034"/>
              <exon start="91140" stop="91309"/>
              <exon start="91509" stop="91928"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572229" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTAGGATTCTATCCGCCGCCTCGCAAATAAGTCGGTTGACAATCTCTCTATATATAGCCTGTAATTAGATAGTTTCTCCAGTCATTCTAGCCTTCTTTTCCGCCGGATGAGTAACGTGGATTCCTTAAGCAGGTTGCTGGGGAGCAGGGTCGTTTTGCCCAAAGTATTGTCGATCAGGTATGAACAGCGTGATGGCTCGAATGATCCGCCCCTGGTAGTAAGGAGTCTTGATTCGTCATCTCAGGGCTGAGATGGCGTAGAAAGGAGTCTTGATACGTCTTCACAAGGAATCTTGGCTCAGATTGTGTAGAGGAGAGTCTTGATTCGTCATCTCAAGGAATCTTGGCTCAGATGGCTAGGGTGCCAGATGAATTTGAATTCTTGGCGTTGTTGGATGGATTTCCCTGTCATAATCAGAAGCGTCGAGAGCAATACCCATAGGAAGTTGTTGTTGTATGAAGATGTATAGAGGTATAGGTGGGGCATAAAAGCCCTAATATCAGGGGTGATGTCCCGTTTTAAATTACCCTGTTACTGCTCTGGCCTTTGCCATGTCGGGTGCGCTTGCATGGCAGGTCCCTATATTTAATATAAATTGGATTTTTCGGGGTTTTGAGGGGGAGATAGCACGGATTTTTTTTTTTGGCCCGGGATCTCTCCCCTCTTGGTGTGTGTGTGTGTTTTATGCCTTCTCTGATTCTTGTTTGCACGTTATGCTCTGCATCGTCAGATCAGCAGTCTCTCAACGAGCTATCCTTAATTTGCCGCCCACCCAAATGTAAG : TCAAGGCAGAAGAAGATTATGAAGGTGAACGTTCAAGATTGAACATCGATTTCATCAGTGCTAACAACTCCAAATCTAGTGCACTATCTGTGGACAAAATCTACTCGGATTCAGATATGCATAATAGGCTCGTAATTATGGTTGCTTGGATTCCTAATAATAGACCTCAG : ATTCAATTATAAGAAACTGAGAACTGAAATATATAAGTTCTCTGCCTGCTGATGTCAATTAAGTCTCTTTGCGCGAGTGGTTGTTGCTCTTCATTACATTCATAGTTGGGCCAGAAGGAGCTACTGAATTGCGGTTCTTCAAATATTTAGTTGATAAGCGATTTGCATTTAAATACCAAATCTCAGATTTGCATTTAAATTCCAAACCTTAATCGCTTTGCAAATATGGTACTGAACTGGCGGGATAATGCTTATTCAACTTGGAGCGGAAGATGCATGCAGAAATTTTTGTGGTAGTGAGAAATTTTGATAATAGTGGGAAGAAAATTTTGGCTATGGTCATCTTTGGCATTACTCAACTCTGGCGTTTATTTGCTCAATCGACACTCTGCACATACACAATCTGTTCATGCTATTATG</gDNA_template>
            <first_frame> S  R  I  L  S  A  A  S  Q  I  S  R  L  T  I  S  L  Y  I  A  C  N  *  I  V  S  P  V  I  L  A  F  F  S  A  G  *  V  T  W  I  P  *  A  G  C  W  G  A  G  S  F  C  P  K  Y  C  R  S  G  M  N  S  V  M  A  R  M  I  R  P  W  *  *  G  V  L  I  R  H  L  R  A  E  M  A  *  K  G  V  L  I  R  L  H  K  E  S  W  L  R  L  C  R  G  E  S  *  F  V  I  S  R  N  L  G  S  D  G  *  G  A  R  *  I  *  I  L  G  V  V  G  W  I  S  L  S  *  S  E  A  S  R  A  I  P  I  G  S  C  C  C  M  K  M  Y  R  G  I  G  G  A  *  K  P  *  Y  Q  G  *  C  P  V  L  N  Y  P  V  T  A  L  A  F  A  M  S  G  A  L  A  W  Q  V  P  I  F  N  I  N  W  I  F  R  G  F  E  G  E  I  A  R  I  F  F  F  G  P  G  S  L  P  S  W  C  V  C  V  F  Y  A  F  S  D  S  C  L  H  V  M  L  C  I  V  R  S  A  V  S  Q  R  A  I  L  N  L  P  P  T  Q  M  *   : V  K  A  E  E  D  Y  E  G  E  R  S  R  L  N  I  D  F  I  S  A  N  N  S  K  S  S  A  L  S  V  D  K  I  Y  S  D  S  D  M  H  N  R  L  V  I  M  V  A  W  I  P  N  N  R  P  Q  :  I  Q  L  *  E  T  E  N  *  N  I  *  V  L  C  L  L  M  S  I  K  S  L  C  A  S  G  C  C  S  S  L  H  S  *  L  G  Q  K  E  L  L  N  C  G  S  S  N  I  *  L  I  S  D  L  H  L  N  T  K  S  Q  I  C  I  *  I  P  N  L  N  R  F  A  N  M  V  L  N  W  R  D  N  A  Y  S  T  W  S  G  R  C  M  Q  K  F  L  W  *  *  E  I  L  I  I  V  G  R  K  F  W  L  W  S  S  L  A  L  L  N  S  G  V  Y  L  L  N  R  H  S  A  H  T  Q  S  V  H  A  I  M </first_frame>
            <second_frame>  L  G  F  Y  P  P  P  R  K  *  V  G  *  Q  S  L  Y  I  *  P  V  I  R  *  F  L  Q  S  F  *  P  S  F  P  P  D  E  *  R  G  F  L  K  Q  V  A  G  E  Q  G  R  F  A  Q  S  I  V  D  Q  V  *  T  A  *  W  L  E  *  S  A  P  G  S  K  E  S  *  F  V  I  S  G  L  R  W  R  R  K  E  S  *  Y  V  F  T  R  N  L  G  S  D  C  V  E  E  S  L  D  S  S  S  Q  G  I  L  A  Q  M  A  R  V  P  D  E  F  E  F  L  A  L  L  D  G  F  P  C  H  N  Q  K  R  R  E  Q  Y  P  *  E  V  V  V  V  *  R  C  I  E  V  *  V  G  H  K  S  P  N  I  R  G  D  V  P  F  *  I  T  L  L  L  L  W  P  L  P  C  R  V  R  L  H  G  R  S  L  Y  L  I  *  I  G  F  F  G  V  L  R  G  R  *  H  G  F  F  F  L  A  R  D  L  S  P  L  G  V  C  V  C  F  M  P  S  L  I  L  V  C  T  L  C  S  A  S  S  D  Q  Q  S  L  N  E  L  S  L  I  C  R  P  P  K  C  K  :  S  R  Q  K  K  I  M  K  V  N  V  Q  D  *  T  S  I  S  S  V  L  T  T  P  N  L  V  H  Y  L  W  T  K  S  T  R  I  Q  I  C  I  I  G  S  *  L  W  L  L  G  F  L  I  I  D  L  R :   F  N  Y  K  K  L  R  T  E  I  Y  K  F  S  A  C  *  C  Q  L  S  L  F  A  R  V  V  V  A  L  H  Y  I  H  S  W  A  R  R  S  Y  *  I  A  V  L  Q  I  F  S  *  *  A  I  C  I  *  I  P  N  L  R  F  A  F  K  F  Q  T  L  I  A  L  Q  I  W  Y  *  T  G  G  I  M  L  I  Q  L  G  A  E  D  A  C  R  N  F  C  G  S  E  K  F  *  *  *  W  E  E  N  F  G  Y  G  H  L  W  H  Y  S  T  L  A  F  I  C  S  I  D  T  L  H  I  H  N  L  F  M  L  L   </second_frame>
            <third_frame>   *  D  S  I  R  R  L  A  N  K  S  V  D  N  L  S  I  Y  S  L  *  L  D  S  F  S  S  H  S  S  L  L  F  R  R  M  S  N  V  D  S  L  S  R  L  L  G  S  R  V  V  L  P  K  V  L  S  I  R  Y  E  Q  R  D  G  S  N  D  P  P  L  V  V  R  S  L  D  S  S  S  Q  G  *  D  G  V  E  R  S  L  D  T  S  S  Q  G  I  L  A  Q  I  V  *  R  R  V  L  I  R  H  L  K  E  S  W  L  R  W  L  G  C  Q  M  N  L  N  S  W  R  C  W  M  D  F  P  V  I  I  R  S  V  E  S  N  T  H  R  K  L  L  L  Y  E  D  V  *  R  Y  R  W  G  I  K  A  L  I  S  G  V  M  S  R  F  K  L  P  C  Y  C  S  G  L  C  H  V  G  C  A  C  M  A  G  P  Y  I  *  Y  K  L  D  F  S  G  F  *  G  G  D  S  T  D  F  F  F  W  P  G  I  S  P  L  L  V  C  V  C  V  L  C  L  L  *  F  L  F  A  R  Y  A  L  H  R  Q  I  S  S  L  S  T  S  Y  P  *  F  A  A  H  P  N  V  S :   Q  G  R  R  R  L  *  R  *  T  F  K  I  E  H  R  F  H  Q  C  *  Q  L  Q  I  *  C  T  I  C  G  Q  N  L  L  G  F  R  Y  A  *  *  A  R  N  Y  G  C  L  D  S  *  *  *  T  S   : D  S  I  I  R  N  *  E  L  K  Y  I  S  S  L  P  A  D  V  N  *  V  S  L  R  E  W  L  L  L  F  I  T  F  I  V  G  P  E  G  A  T  E  L  R  F  F  K  Y  L  V  D  K  R  F  A  F  K  Y  Q  I  S  D  L  H  L  N  S  K  P  *  S  L  C  K  Y  G  T  E  L  A  G  *  C  L  F  N  L  E  R  K  M  H  A  E  I  F  V  V  V  R  N  F  D  N  S  G  K  K  I  L  A  M  V  I  F  G  I  T  Q  L  W  R  L  F  A  Q  S  T  L  C  T  Y  T  I  C  S  C  Y  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90761" stop="91033"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CPVLNYPVTALAFAMSGALAWQVPIFNINWIFRGFEGEIARIFFFGPGSLPSWCVCVFYAFSDSCLHVMLCIVRSAVSQRAILNLPPTQM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90879" stop="91034"/>
                    <exon start="91140" stop="91181"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HGFFFLARDLSPLGVCVCFMPSLILVCTLCSASSDQQSLNELSLICRPPKCKSRQKKIMKVNVQD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="92405" PGL_stop="93001"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92405" e_stop="93001"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="92405" e_stop="93001" e_length="597"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92405" stop="93001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604233" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TACCGGAGAGATCAAAATGAACTCTCGAGATGGTCTGTGAATACCTATTAGTATTTGCTAACGTGGTAAATGGCGATAATCAATCTAACCAAGAGATGTTACGGCAATTCACTTGAATATGTTCCAAGTTCATGAAAACAGAGGAAGTGGATGTTATTACAGAAATTATTTCAGTAGCTGAGGTGGGTACAGCTCCAAGTAGTGAGGAGACACTTCTTATTAGGCATGCATGTAATGTAGTTGCCGAAATTCAACAGACGATTATAAACCAACACCTAAGGAATCTTTGTGGATTGTGGAATTGCTTGCTGAGATGTTGACTTGTTAAGGAGACGCAGGCCTAGTATGGTGCAGTATTTTGTACTTTCCTCCTCCTCTATGGAGACGGACTCTGGCAAGTCAGAACAGATCATTGATCTAATCCATCGGAGATTCAAGGGTATAGCAGTAGTACCACCAAATGTAAGTGTTTATCCAACAATGACTACTAGGTTGTGTAAAGACTGCAGAGAGGAGAAAGATCATTTGCCGTTGAGGGTGTATAAGTGATATTTGGCATTTGCCAATTGTGAATATAAGATCCGTGAAGCTTATTGT</gDNA_template>
            <first_frame> Y  R  R  D  Q  N  E  L  S  R  W  S  V  N  T  Y  *  Y  L  L  T  W  *  M  A  I  I  N  L  T  K  R  C  Y  G  N  S  L  E  Y  V  P  S  S  *  K  Q  R  K  W  M  L  L  Q  K  L  F  Q  *  L  R  W  V  Q  L  Q  V  V  R  R  H  F  L  L  G  M  H  V  M  *  L  P  K  F  N  R  R  L  *  T  N  T  *  G  I  F  V  D  C  G  I  A  C  *  D  V  D  L  L  R  R  R  R  P  S  M  V  Q  Y  F  V  L  S  S  S  S  M  E  T  D  S  G  K  S  E  Q  I  I  D  L  I  H  R  R  F  K  G  I  A  V  V  P  P  N  V  S  V  Y  P  T  M  T  T  R  L  C  K  D  C  R  E  E  K  D  H  L  P  L  R  V  Y  K  *  Y  L  A  F  A  N  C  E  Y  K  I  R  E  A  Y  C </first_frame>
            <second_frame>  T  G  E  I  K  M  N  S  R  D  G  L  *  I  P  I  S  I  C  *  R  G  K  W  R  *  S  I  *  P  R  D  V  T  A  I  H  L  N  M  F  Q  V  H  E  N  R  G  S  G  C  Y  Y  R  N  Y  F  S  S  *  G  G  Y  S  S  K  *  *  G  D  T  S  Y  *  A  C  M  *  C  S  C  R  N  S  T  D  D  Y  K  P  T  P  K  E  S  L  W  I  V  E  L  L  A  E  M  L  T  C  *  G  D  A  G  L  V  W  C  S  I  L  Y  F  P  P  P  L  W  R  R  T  L  A  S  Q  N  R  S  L  I  *  S  I  G  D  S  R  V  *  Q  *  Y  H  Q  M  *  V  F  I  Q  Q  *  L  L  G  C  V  K  T  A  E  R  R  K  I  I  C  R  *  G  C  I  S  D  I  W  H  L  P  I  V  N  I  R  S  V  K  L  I   </second_frame>
            <third_frame>   P  E  R  S  K  *  T  L  E  M  V  C  E  Y  L  L  V  F  A  N  V  V  N  G  D  N  Q  S  N  Q  E  M  L  R  Q  F  T  *  I  C  S  K  F  M  K  T  E  E  V  D  V  I  T  E  I  I  S  V  A  E  V  G  T  A  P  S  S  E  E  T  L  L  I  R  H  A  C  N  V  V  A  E  I  Q  Q  T  I  I  N  Q  H  L  R  N  L  C  G  L  W  N  C  L  L  R  C  *  L  V  K  E  T  Q  A  *  Y  G  A  V  F  C  T  F  L  L  L  Y  G  D  G  L  W  Q  V  R  T  D  H  *  S  N  P  S  E  I  Q  G  Y  S  S  S  T  T  K  C  K  C  L  S  N  N  D  Y  *  V  V  *  R  L  Q  R  G  E  R  S  F  A  V  E  G  V  *  V  I  F  G  I  C  Q  L  *  I  *  D  P  *  S  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92717" stop="92953"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DVDLLRRRRPSMVQYFVLSSSSMETDSGKSEQIIDLIHRRFKGIAVVPPNVSVYPTMTTRLCKDCREEKDHLPLRVYK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92521" stop="92724"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ICSKFMKTEEVDVITEIISVAEVGTAPSSEETLLIRHACNVVAEIQQTIINQHLRNLCGLWNCLLRC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="93687" PGL_stop="95396"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="93687" e_stop="93860"/>
            <exon e_start="94115" e_stop="94182"/>
            <exon e_start="94408" e_stop="94584"/>
            <exon e_start="94747" e_stop="94845"/>
            <exon e_start="94939" e_stop="95184"/>
            <exon e_start="95293" e_stop="95396"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.983" acc_prob="0.580" e_score="0.983"/>
          <exon-intron don_prob="0.982" acc_prob="0.857" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.789" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.000" e_score="0.967"/>
          <exon-only e_score="0.827"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="93687" e_stop="93860" e_length="174"/>
          </exon>
          <intron i_serial="1" don_prob="0.983" acc_prob="0.580">
            <gDNA_intron_boundary i_start="93861" i_stop="94114" i_length="254"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="94115" e_stop="94182" e_length="68"/>
          </exon>
          <intron i_serial="2" don_prob="0.982" acc_prob="0.857">
            <gDNA_intron_boundary i_start="94183" i_stop="94407" i_length="225"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="94408" e_stop="94584" e_length="177"/>
          </exon>
          <intron i_serial="3" don_prob="0.981" acc_prob="0.977">
            <gDNA_intron_boundary i_start="94585" i_stop="94746" i_length="162"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="94747" e_stop="94845" e_length="99"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.789">
            <gDNA_intron_boundary i_start="94846" i_stop="94938" i_length="93"/>
          </intron>
          <exon e_serial="5" e_score="0.967">
            <gDNA_exon_boundary e_start="94939" e_stop="95184" e_length="246"/>
          </exon>
          <intron i_serial="5" don_prob="0.960" acc_prob="0.000">
            <gDNA_intron_boundary i_start="95185" i_stop="95292" i_length="108"/>
          </intron>
          <exon e_serial="6" e_score="0.827">
            <gDNA_exon_boundary e_start="95293" e_stop="95396" e_length="104"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93687" stop="93860"/>
              <exon start="94115" stop="94182"/>
              <exon start="94408" stop="94584"/>
              <exon start="94747" stop="94845"/>
              <exon start="94939" stop="95184"/>
              <exon start="95293" stop="95396"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568417" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGACTACAAGCGTGTGAAAAATTCCATTTTCCGTCTGTTCCCTCTTTGTAACTGTTCAAGTGAATGATCACCTACTTTGCGTGATATCTCTACAACTTCAAGTGGTGTTGTATACTTTTCCCACAAGAATTAATTTCTATTGTGTTCATGTAGAGTGATCGAGGGGATCACAG : GAATCATGTTCCGGAGAAAGTCGTCTCGCACAATTCAGGCAGATGATTCTGCAGCCCGTGGTGCAAAG : GTTAGCGAGTTAAGAGAGGCTGTTGGACCTCTCTCTGGGCGAAACTTAAAGTTCTGTACCGATGTGTGTCTGAGGCAATACTTAGAAGCTCGAAATTGGAACCTTGACAAGGCAAAAAAAATGCTCGAAGAGACTCTCAAGTGGAGATCCACCTATAAGCCTGAAGAAATTCGTTGG : CATGAAGTGGCACATGAAAGTGAAACTGGCAAAGTTTCTAAGGGTAATTTTCAAGACCGACTTGGCAGAACCGTCCTTATAATGAGGCCTGGGAAACAG : AATACATCATCTCCGGAAGGTAATATTCGTCATCTAGTCTATCTGATGGAGAGTGCTATCCTTAACCTGCCAGAAGGCCAAGAACAAATGTCTTGGTTGATAGACTTCAATGGATGGTCATTGAACACCAACATTCCCATTAAAACTGCAAGAGATATTATCTACATTTTGCAGAATCATTATCCAGAGAGGCTTGCTATAGTTGTTCTTTATAGTCCACCTAGATTTTTCGAGGCATTTTGGAAG : ATCAAGTTTGTGTATCCCAATAACAAAGATAGCGTGGAGTTGATGAAGACTTTTTTCGATACTGAGAATCTTCCAAGTGAGTTTGGGGGAAAAGCCACATTGAA</gDNA_template>
            <first_frame> K  T  T  S  V  *  K  I  P  F  S  V  C  S  L  F  V  T  V  Q  V  N  D  H  L  L  C  V  I  S  L  Q  L  Q  V  V  L  Y  T  F  P  T  R  I  N  F  Y  C  V  H  V  E  *  S  R  G  S  Q  :  E  S  C  S  G  E  S  R  L  A  Q  F  R  Q  M  I  L  Q  P  V  V  Q  R :   L  A  S  *  E  R  L  L  D  L  S  L  G  E  T  *  S  S  V  P  M  C  V  *  G  N  T  *  K  L  E  I  G  T  L  T  R  Q  K  K  C  S  K  R  L  S  S  G  D  P  P  I  S  L  K  K  F  V  G :   M  K  W  H  M  K  V  K  L  A  K  F  L  R  V  I  F  K  T  D  L  A  E  P  S  L  *  *  G  L  G  N  R :   I  H  H  L  R  K  V  I  F  V  I  *  S  I  *  W  R  V  L  S  L  T  C  Q  K  A  K  N  K  C  L  G  *  *  T  S  M  D  G  H  *  T  P  T  F  P  L  K  L  Q  E  I  L  S  T  F  C  R  I  I  I  Q  R  G  L  L  *  L  F  F  I  V  H  L  D  F  S  R  H  F  G  R :   S  S  L  C  I  P  I  T  K  I  A  W  S  *  *  R  L  F  S  I  L  R  I  F  Q  V  S  L  G  E  K  P  H  *  </first_frame>
            <second_frame>  R  L  Q  A  C  E  K  F  H  F  P  S  V  P  S  L  *  L  F  K  *  M  I  T  Y  F  A  *  Y  L  Y  N  F  K  W  C  C  I  L  F  P  Q  E  L  I  S  I  V  F  M  *  S  D  R  G  D  H  R :   N  H  V  P  E  K  V  V  S  H  N  S  G  R  *  F  C  S  P  W  C  K   : G  *  R  V  K  R  G  C  W  T  S  L  W  A  K  L  K  V  L  Y  R  C  V  S  E  A  I  L  R  S  S  K  L  E  P  *  Q  G  K  K  N  A  R  R  D  S  Q  V  E  I  H  L  *  A  *  R  N  S  L   : A  *  S  G  T  *  K  *  N  W  Q  S  F  *  G  *  F  S  R  P  T  W  Q  N  R  P  Y  N  E  A  W  E  T   : E  Y  I  I  S  G  R  *  Y  S  S  S  S  L  S  D  G  E  C  Y  P  *  P  A  R  R  P  R  T  N  V  L  V  D  R  L  Q  W  M  V  I  E  H  Q  H  S  H  *  N  C  K  R  Y  Y  L  H  F  A  E  S  L  S  R  E  A  C  Y  S  C  S  L  *  S  T  *  I  F  R  G  I  L  E   : D  Q  V  C  V  S  Q  *  Q  R  *  R  G  V  D  E  D  F  F  R  Y  *  E  S  S  K  *  V  W  G  K  S  H  I  E </second_frame>
            <third_frame>   D  Y  K  R  V  K  N  S  I  F  R  L  F  P  L  C  N  C  S  S  E  *  S  P  T  L  R  D  I  S  T  T  S  S  G  V  V  Y  F  S  H  K  N  *  F  L  L  C  S  C  R  V  I  E  G  I  T   : G  I  M  F  R  R  K  S  S  R  T  I  Q  A  D  D  S  A  A  R  G  A  K  :  V  S  E  L  R  E  A  V  G  P  L  S  G  R  N  L  K  F  C  T  D  V  C  L  R  Q  Y  L  E  A  R  N  W  N  L  D  K  A  K  K  M  L  E  E  T  L  K  W  R  S  T  Y  K  P  E  E  I  R  W  :  H  E  V  A  H  E  S  E  T  G  K  V  S  K  G  N  F  Q  D  R  L  G  R  T  V  L  I  M  R  P  G  K  Q  :  N  T  S  S  P  E  G  N  I  R  H  L  V  Y  L  M  E  S  A  I  L  N  L  P  E  G  Q  E  Q  M  S  W  L  I  D  F  N  G  W  S  L  N  T  N  I  P  I  K  T  A  R  D  I  I  Y  I  L  Q  N  H  Y  P  E  R  L  A  I  V  V  L  Y  S  P  P  R  F  F  E  A  F  W  K  :  I  K  F  V  Y  P  N  N  K  D  S  V  E  L  M  K  T  F  F  D  T  E  N  L  P  S  E  F  G  G  K  A  T  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93821" stop="93860"/>
                    <exon start="94115" stop="94182"/>
                    <exon start="94408" stop="94584"/>
                    <exon start="94747" stop="94845"/>
                    <exon start="94939" stop="95184"/>
                    <exon start="95293" stop="95394"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>732</number_coding_nucleotides>
                  <number_encoded_amino_acids>244</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLLCSCRVIEGITGIMFRRKSSRTIQADDSAARGAKVSELREAVGPLSGRNLKFCTDVCLRQYLEARNWNLDKAKKMLEETLKWRSTYKPEEIRWHEVAHESETGKVSKGNFQDRLGRTVLIMRPGKQNTSSPEGNIRHLVYLMESAILNLPEGQEQMSWLIDFNGWSLNTNIPIKTARDIIYILQNHYPERLAIVVLYSPPRFFEAFWKIKFVYPNNKDSVELMKTFFDTENLPSEFGGKATL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="93720" e_stop="94454"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="93720" e_stop="94454" e_length="735"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93720" stop="94454"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596267" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCTGTTCCCTCTTTGTAACTGTTCAAGTGAATGATCACCTACTTTGCGTGATATCTCTACAACTTCAAGTGGTGTTGTATACTTTTCCCACAAGAATTAATTTCTATTGTGTTCATGTAGAGTGATCGAGGGGATCACAGGTTTCTCTCTTTATTTCTCTCTTTTGTATGATATCTTTCAAGTCCCAAATCTTTCTGCAATCTTCCTAATTCCTTTCCAAGAAAAGTAATCGTTTTTTTCTTAAAGTCATTCTCATCTCTTTTCCTTTTGCTTTATTTACTTTTTCATAATCCAGCTTATCTTACCGGAATTCTAAATTTACTAGTGGTAGTCTTAGTGATGAAGCAGAGTCGCATATACATGTAACTGCTAGCACCATTTTTTCAATTAACAGGAATCATGTTCCGGAGAAAGTCGTCTCGCACAATTCAGGCAGATGATTCTGCAGCCCGTGGTGCAAAGGTAACAGACAAAGTTATATTCTTACATTCCGATTTGCTTCATCAAATCCACCATGACAAAGTATCTGTCTCAATTACCCCTAGAAAATCCATTTAATGTTTAATAATAACTAGATTGACCACTGGGTAAATGTTCCATTCAAATTGAATTGTCAGGACAATTAAACTGAGCAATAACTGGTAGTTAAAACTATAGAACAGGGATTAATTTTCTATGGCAAACCAGGTTAGCGAGTTAAGAGAGGCTGTTGGACCTCTCTCTGGGCGAAACTT</gDNA_template>
            <first_frame> V  C  S  L  F  V  T  V  Q  V  N  D  H  L  L  C  V  I  S  L  Q  L  Q  V  V  L  Y  T  F  P  T  R  I  N  F  Y  C  V  H  V  E  *  S  R  G  S  Q  V  S  L  F  I  S  L  F  C  M  I  S  F  K  S  Q  I  F  L  Q  S  S  *  F  L  S  K  K  S  N  R  F  F  L  K  V  I  L  I  S  F  P  F  A  L  F  T  F  S  *  S  S  L  S  Y  R  N  S  K  F  T  S  G  S  L  S  D  E  A  E  S  H  I  H  V  T  A  S  T  I  F  S  I  N  R  N  H  V  P  E  K  V  V  S  H  N  S  G  R  *  F  C  S  P  W  C  K  G  N  R  Q  S  Y  I  L  T  F  R  F  A  S  S  N  P  P  *  Q  S  I  C  L  N  Y  P  *  K  I  H  L  M  F  N  N  N  *  I  D  H  W  V  N  V  P  F  K  L  N  C  Q  D  N  *  T  E  Q  *  L  V  V  K  T  I  E  Q  G  L  I  F  Y  G  K  P  G  *  R  V  K  R  G  C  W  T  S  L  W  A  K  L </first_frame>
            <second_frame>  S  V  P  S  L  *  L  F  K  *  M  I  T  Y  F  A  *  Y  L  Y  N  F  K  W  C  C  I  L  F  P  Q  E  L  I  S  I  V  F  M  *  S  D  R  G  D  H  R  F  L  S  L  F  L  S  F  V  *  Y  L  S  S  P  K  S  F  C  N  L  P  N  S  F  P  R  K  V  I  V  F  F  L  K  S  F  S  S  L  F  L  L  L  Y  L  L  F  H  N  P  A  Y  L  T  G  I  L  N  L  L  V  V  V  L  V  M  K  Q  S  R  I  Y  M  *  L  L  A  P  F  F  Q  L  T  G  I  M  F  R  R  K  S  S  R  T  I  Q  A  D  D  S  A  A  R  G  A  K  V  T  D  K  V  I  F  L  H  S  D  L  L  H  Q  I  H  H  D  K  V  S  V  S  I  T  P  R  K  S  I  *  C  L  I  I  T  R  L  T  T  G  *  M  F  H  S  N  *  I  V  R  T  I  K  L  S  N  N  W  *  L  K  L  *  N  R  D  *  F  S  M  A  N  Q  V  S  E  L  R  E  A  V  G  P  L  S  G  R  N   </second_frame>
            <third_frame>   L  F  P  L  C  N  C  S  S  E  *  S  P  T  L  R  D  I  S  T  T  S  S  G  V  V  Y  F  S  H  K  N  *  F  L  L  C  S  C  R  V  I  E  G  I  T  G  F  S  L  Y  F  S  L  L  Y  D  I  F  Q  V  P  N  L  S  A  I  F  L  I  P  F  Q  E  K  *  S  F  F  S  *  S  H  S  H  L  F  S  F  C  F  I  Y  F  F  I  I  Q  L  I  L  P  E  F  *  I  Y  *  W  *  S  *  *  *  S  R  V  A  Y  T  C  N  C  *  H  H  F  F  N  *  Q  E  S  C  S  G  E  S  R  L  A  Q  F  R  Q  M  I  L  Q  P  V  V  Q  R  *  Q  T  K  L  Y  S  Y  I  P  I  C  F  I  K  S  T  M  T  K  Y  L  S  Q  L  P  L  E  N  P  F  N  V  *  *  *  L  D  *  P  L  G  K  C  S  I  Q  I  E  L  S  G  Q  L  N  *  A  I  T  G  S  *  N  Y  R  T  G  I  N  F  L  W  Q  T  R  L  A  S  *  E  R  L  L  D  L  S  L  G  E  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="16" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93892" stop="94086"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YLSSPKSFCNLPNSFPRKVIVFFLKSFSSLFLLLYLLFHNPAYLTGILNLLVVVLVMKQSRIYM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="97429" PGL_stop="101728"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="97429" e_stop="97517"/>
            <exon e_start="97653" e_stop="97724"/>
            <exon e_start="98018" e_stop="98092"/>
            <exon e_start="98865" e_stop="98948"/>
            <exon e_start="99494" e_stop="99563"/>
            <exon e_start="99668" e_stop="99759"/>
            <exon e_start="101209" e_stop="101250"/>
            <exon e_start="101323" e_stop="101403"/>
            <exon e_start="101502" e_stop="101728"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.950" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.950" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.154" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.910" acc_prob="0.738" e_score="1.000"/>
          <exon-intron don_prob="0.704" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.978"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="97429" e_stop="97517" e_length="89"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.950">
            <gDNA_intron_boundary i_start="97518" i_stop="97652" i_length="135"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="97653" e_stop="97724" e_length="72"/>
          </exon>
          <intron i_serial="2" don_prob="0.982" acc_prob="1.000">
            <gDNA_intron_boundary i_start="97725" i_stop="98017" i_length="293"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="98018" e_stop="98092" e_length="75"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="98093" i_stop="98864" i_length="772"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="98865" e_stop="98948" e_length="84"/>
          </exon>
          <intron i_serial="4" don_prob="0.950" acc_prob="0.000">
            <gDNA_intron_boundary i_start="98949" i_stop="99493" i_length="545"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="99494" e_stop="99563" e_length="70"/>
          </exon>
          <intron i_serial="5" don_prob="0.154" acc_prob="1.000">
            <gDNA_intron_boundary i_start="99564" i_stop="99667" i_length="104"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="99668" e_stop="99759" e_length="92"/>
          </exon>
          <intron i_serial="6" don_prob="0.987" acc_prob="0.998">
            <gDNA_intron_boundary i_start="99760" i_stop="101208" i_length="1449"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="101209" e_stop="101250" e_length="42"/>
          </exon>
          <intron i_serial="7" don_prob="0.910" acc_prob="0.738">
            <gDNA_intron_boundary i_start="101251" i_stop="101322" i_length="72"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="101323" e_stop="101403" e_length="81"/>
          </exon>
          <intron i_serial="8" don_prob="0.704" acc_prob="0.999">
            <gDNA_intron_boundary i_start="101404" i_stop="101501" i_length="98"/>
          </intron>
          <exon e_serial="9" e_score="0.978">
            <gDNA_exon_boundary e_start="101502" e_stop="101728" e_length="227"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97429" stop="97517"/>
              <exon start="97653" stop="97724"/>
              <exon start="98018" stop="98092"/>
              <exon start="98865" stop="98948"/>
              <exon start="99494" stop="99563"/>
              <exon start="99668" stop="99759"/>
              <exon start="101209" stop="101250"/>
              <exon start="101323" stop="101403"/>
              <exon start="101502" stop="101728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573619" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCTTATCTCCAAAGCTAACCGTTGCCCTTTGAAGAAGAGGTGAGAAAGAGAGCGCCAAACAAATGGCTCCGAAGAACTTGTCGTTCAAG : ATAATCTTGGGTTCTTCCTCAATGGCACGTCGCAAAATATTAGCGGACATGGGTTATGAATTTACAGTAATG : GGTGCTGACATTGATGAAAAGAGCATTAGGAAAGATAATGCAGAGGAATTAGTGATAGCTCTAGCAGAGGCAAAG : GCAGATGCTATTATGTCAAGGCTCAAAACAACTGATCAGTTGGACGAAAATACCCATTCCACTCTGTTAATTACTGCAGATACA : GTGGCGGTTTACGAAGGAATTGTTAGAGAAAAACCATCAAGCAAGGAAGAAGCGCGTCAGTTCATCAAAA : GTTATTCTGGTGGTCAAGCCACAGTTGTAGGATCTGTTGTTGTGACCAACCTTACAAAGGGGATAAGAAAAGGAGCTTGGGAAAGGTCCGAG : GTATATTTCCATGACATACCTGATGAGATTATTGACAGCCTG : ATTGAGGAGGGAATAATACTTAATGTTGCTGGTGGCTTAATGCTTGAACATCCATTGACGCTGCCCTTTGTTGACACTCTG : ATTGGAACTGCTGACAGTGTTATGGGACTCCCAAGAAATCTCACTGAAAAACTTATCGAAGAAGCCCTCTAGCTGCTGGAATTCCACAAGTGAATAAATATCCTTTCGATCACCTCTCCTGAAATGTACTTGATTACTAGATTTTTGAGTTTATAAACTTGTCTTTCTGAAGTGAACATTGGAAACATGCACGAAAGGAAATACTGGCTGAAAGACATTCTTCTTTC</gDNA_template>
            <first_frame> A  Y  L  Q  S  *  P  L  P  F  E  E  E  V  R  K  R  A  P  N  K  W  L  R  R  T  C  R  S  R :   *  S  W  V  L  P  Q  W  H  V  A  K  Y  *  R  T  W  V  M  N  L  Q  *  W :   V  L  T  L  M  K  R  A  L  G  K  I  M  Q  R  N  *  *  *  L  *  Q  R  Q  R :   Q  M  L  L  C  Q  G  S  K  Q  L  I  S  W  T  K  I  P  I  P  L  C  *  L  L  Q  I  Q :   W  R  F  T  K  E  L  L  E  K  N  H  Q  A  R  K  K  R  V  S  S  S  K  :  V  I  L  V  V  K  P  Q  L  *  D  L  L  L  *  P  T  L  Q  R  G  *  E  K  E  L  G  K  G  P  R :   Y  I  S  M  T  Y  L  M  R  L  L  T  A  * :   L  R  R  E  *  Y  L  M  L  L  V  A  *  C  L  N  I  H  *  R  C  P  L  L  T  L  * :   L  E  L  L  T  V  L  W  D  S  Q  E  I  S  L  K  N  L  S  K  K  P  S  S  C  W  N  S  T  S  E  *  I  S  F  R  S  P  L  L  K  C  T  *  L  L  D  F  *  V  Y  K  L  V  F  L  K  *  T  L  E  T  C  T  K  G  N  T  G  *  K  T  F  F  F  </first_frame>
            <second_frame>  L  I  S  K  A  N  R  C  P  L  K  K  R  *  E  R  E  R  Q  T  N  G  S  E  E  L  V  V  Q   : D  N  L  G  F  F  L  N  G  T  S  Q  N  I  S  G  H  G  L  *  I  Y  S  N   : G  C  *  H  *  *  K  E  H  *  E  R  *  C  R  G  I  S  D  S  S  S  R  G  K   : G  R  C  Y  Y  V  K  A  Q  N  N  *  S  V  G  R  K  Y  P  F  H  S  V  N  Y  C  R  Y   : S  G  G  L  R  R  N  C  *  R  K  T  I  K  Q  G  R  S  A  S  V  H  Q  K :   L  F  W  W  S  S  H  S  C  R  I  C  C  C  D  Q  P  Y  K  G  D  K  K  R  S  L  G  K  V  R   : G  I  F  P  *  H  T  *  *  D  Y  *  Q  P   : D  *  G  G  N  N  T  *  C  C  W  W  L  N  A  *  T  S  I  D  A  A  L  C  *  H  S   : D  W  N  C  *  Q  C  Y  G  T  P  K  K  S  H  *  K  T  Y  R  R  S  P  L  A  A  G  I  P  Q  V  N  K  Y  P  F  D  H  L  S  *  N  V  L  D  Y  *  I  F  E  F  I  N  L  S  F  *  S  E  H  W  K  H  A  R  K  E  I  L  A  E  R  H  S  S  F </second_frame>
            <third_frame>   L  S  P  K  L  T  V  A  L  *  R  R  G  E  K  E  S  A  K  Q  M  A  P  K  N  L  S  F  K  :  I  I  L  G  S  S  S  M  A  R  R  K  I  L  A  D  M  G  Y  E  F  T  V  M  :  G  A  D  I  D  E  K  S  I  R  K  D  N  A  E  E  L  V  I  A  L  A  E  A  K  :  A  D  A  I  M  S  R  L  K  T  T  D  Q  L  D  E  N  T  H  S  T  L  L  I  T  A  D  T  :  V  A  V  Y  E  G  I  V  R  E  K  P  S  S  K  E  E  A  R  Q  F  I  K   : S  Y  S  G  G  Q  A  T  V  V  G  S  V  V  V  T  N  L  T  K  G  I  R  K  G  A  W  E  R  S  E  :  V  Y  F  H  D  I  P  D  E  I  I  D  S  L  :  I  E  E  G  I  I  L  N  V  A  G  G  L  M  L  E  H  P  L  T  L  P  F  V  D  T  L  :  I  G  T  A  D  S  V  M  G  L  P  R  N  L  T  E  K  L  I  E  E  A  L  *  L  L  E  F  H  K  *  I  N  I  L  S  I  T  S  P  E  M  Y  L  I  T  R  F  L  S  L  *  T  C  L  S  E  V  N  I  G  N  M  H  E  R  K  Y  W  L  K  D  I  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97461" stop="97517"/>
                    <exon start="97653" stop="97724"/>
                    <exon start="98018" stop="98092"/>
                    <exon start="98865" stop="98948"/>
                    <exon start="99494" stop="99563"/>
                    <exon start="99668" stop="99759"/>
                    <exon start="101209" stop="101250"/>
                    <exon start="101323" stop="101403"/>
                    <exon start="101502" stop="101573"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>642</number_coding_nucleotides>
                  <number_encoded_amino_acids>214</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRGEKESAKQMAPKNLSFKIILGSSSMARRKILADMGYEFTVMGADIDEKSIRKDNAEELVIALAEAKADAIMSRLKTTDQLDENTHSTLLITADTVAVYEGIVREKPSSKEEARQFIKSYSGGQATVVGSVVVTNLTKGIRKGAWERSEVYFHDIPDEIIDSLIEEGIILNVAGGLMLEHPLTLPFVDTLIGTADSVMGLPRNLTEKLIEEAL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="100401" e_stop="100861"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="100401" e_stop="100861" e_length="461"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100401" stop="100861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604718" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCTATGAGTGGAAAGAGACCTTAACCTTGACTTATCTACTAATTTAAACAGAGGCACAAGTTGAGTCAATAATGGAGAGAGACTATGAATAGACTGATTTCTATTTAGCACACGTGAGCATTACAACTCCAGGCATAACAAGGGAGTATTTTTTGAAAATTGCTTAGGTTTCTAAATTTTCATCGCTGCTAGGCTTTGGCATAGAGAATTGTATCTGCTATTACCTCACCATCATGATCTTTGAACCATCTTAATCCTGTCAAGTATGATCAGAATGGTTGTTGTTACAGTTGTACTACTCAATACTGTCAAACTGGAAGTGCAGAGATCTTTTGTTTCGTATTACGAAGGCAGGAAAGAGTGAATGCTGATGAAAACTGGTGTATTTACATCTTTATGTGAAGGGCAGAAAGAGGGTGAATGTGGATGGAATCTGGTTCATTACAGCCCATCAACATTA</gDNA_template>
            <first_frame> V  Y  E  W  K  E  T  L  T  L  T  Y  L  L  I  *  T  E  A  Q  V  E  S  I  M  E  R  D  Y  E  *  T  D  F  Y  L  A  H  V  S  I  T  T  P  G  I  T  R  E  Y  F  L  K  I  A  *  V  S  K  F  S  S  L  L  G  F  G  I  E  N  C  I  C  Y  Y  L  T  I  M  I  F  E  P  S  *  S  C  Q  V  *  S  E  W  L  L  L  Q  L  Y  Y  S  I  L  S  N  W  K  C  R  D  L  L  F  R  I  T  K  A  G  K  S  E  C  *  *  K  L  V  Y  L  H  L  Y  V  K  G  R  K  R  V  N  V  D  G  I  W  F  I  T  A  H  Q  H   </first_frame>
            <second_frame>  S  M  S  G  K  R  P  *  P  *  L  I  Y  *  F  K  Q  R  H  K  L  S  Q  *  W  R  E  T  M  N  R  L  I  S  I  *  H  T  *  A  L  Q  L  Q  A  *  Q  G  S  I  F  *  K  L  L  R  F  L  N  F  H  R  C  *  A  L  A  *  R  I  V  S  A  I  T  S  P  S  *  S  L  N  H  L  N  P  V  K  Y  D  Q  N  G  C  C  Y  S  C  T  T  Q  Y  C  Q  T  G  S  A  E  I  F  C  F  V  L  R  R  Q  E  R  V  N  A  D  E  N  W  C  I  Y  I  F  M  *  R  A  E  R  G  *  M  W  M  E  S  G  S  L  Q  P  I  N  I  </second_frame>
            <third_frame>   L  *  V  E  R  D  L  N  L  D  L  S  T  N  L  N  R  G  T  S  *  V  N  N  G  E  R  L  *  I  D  *  F  L  F  S  T  R  E  H  Y  N  S  R  H  N  K  G  V  F  F  E  N  C  L  G  F  *  I  F  I  A  A  R  L  W  H  R  E  L  Y  L  L  L  P  H  H  H  D  L  *  T  I  L  I  L  S  S  M  I  R  M  V  V  V  T  V  V  L  L  N  T  V  K  L  E  V  Q  R  S  F  V  S  Y  Y  E  G  R  K  E  *  M  L  M  K  T  G  V  F  T  S  L  C  E  G  Q  K  E  G  E  C  G  W  N  L  V  H  Y  S  P  S  T  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0215M12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="97445" e_stop="97517"/>
            <exon e_start="97653" e_stop="97724"/>
            <exon e_start="98018" e_stop="98648"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.950" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="97445" e_stop="97517" e_length="73"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.950">
            <gDNA_intron_boundary i_start="97518" i_stop="97652" i_length="135"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="97653" e_stop="97724" e_length="72"/>
          </exon>
          <intron i_serial="2" don_prob="0.982" acc_prob="1.000">
            <gDNA_intron_boundary i_start="97725" i_stop="98017" i_length="293"/>
          </intron>
          <exon e_serial="3" e_score="0.981">
            <gDNA_exon_boundary e_start="98018" e_stop="98648" e_length="631"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97445" stop="97517"/>
              <exon start="97653" stop="97724"/>
              <exon start="98018" stop="98648"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589070" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACCGTTGCCCTTTGAAGAAGAGGTGAGAAAGAGAGCGCCAAACAAATGGCTCCGAAGAACTTGTCGTTCAAG : ATAATCTTGGGTTCTTCCTCAATGGCACGTCGCAAAATATTAGCGGACATGGGTTATGAATTTACAGTAATG : GGTGCTGACATTGATGAAAAGAGCATTAGGAAAGATAATGCAGAGGAATTAGTGATAGCTCTAGCAGAGGCAAAGGTATACTACCTCTTCTCTATTACCGGTGTGTTTGGTTATATGGTTGATAAAAATGTTCTCAAAAATATTTTTTCTAGAAAAACGATTATTTAAGTTAATTGTCTCCTCCCACCACCTAATGCCCCTACTCCACACCCTCATACTAAGTAAGAAATCCACTTGTTTCCTGATGACGTTTTTTTTGTCTTCGAGTTCATTTCACTGGTGAAGTAATTGGTAGAAGTTCACCATTTAGGTTTGAAACTATAATCAATTTTTTTTGTCCAAGTAACATGAAACAAAGATCTTCGTAGTGTATGTTATTCTTCTAAGTAACACATATCGCCCTATAAAAGTAAAAAGGCCAGGAGTAATTTTAGTGCAGTTATTAGAGGAGTTCTGTTGATAATTGTGTAGAACATGATATCAATAAGAAGGTCAAAATTCAATATTCTTGTGATTGGATGAGATTTATTATTTTGGCATTCCCTTGGCATCTTTTGTGTTCCGACTAACTTCCAATCATTCTGCCCATCAGTGATTTATGTTATGGAATTTCCATTTGATGGTTAGGGAC</gDNA_template>
            <first_frame> N  R  C  P  L  K  K  R  *  E  R  E  R  Q  T  N  G  S  E  E  L  V  V  Q   : D  N  L  G  F  F  L  N  G  T  S  Q  N  I  S  G  H  G  L  *  I  Y  S  N   : G  C  *  H  *  *  K  E  H  *  E  R  *  C  R  G  I  S  D  S  S  S  R  G  K  G  I  L  P  L  L  Y  Y  R  C  V  W  L  Y  G  *  *  K  C  S  Q  K  Y  F  F  *  K  N  D  Y  L  S  *  L  S  P  P  T  T  *  C  P  Y  S  T  P  S  Y  *  V  R  N  P  L  V  S  *  *  R  F  F  C  L  R  V  H  F  T  G  E  V  I  G  R  S  S  P  F  R  F  E  T  I  I  N  F  F  C  P  S  N  M  K  Q  R  S  S  *  C  M  L  F  F  *  V  T  H  I  A  L  *  K  *  K  G  Q  E  *  F  *  C  S  Y  *  R  S  S  V  D  N  C  V  E  H  D  I  N  K  K  V  K  I  Q  Y  S  C  D  W  M  R  F  I  I  L  A  F  P  W  H  L  L  C  S  D  *  L  P  I  I  L  P  I  S  D  L  C  Y  G  I  S  I  *  W  L  G   </first_frame>
            <second_frame>  T  V  A  L  *  R  R  G  E  K  E  S  A  K  Q  M  A  P  K  N  L  S  F  K  :  I  I  L  G  S  S  S  M  A  R  R  K  I  L  A  D  M  G  Y  E  F  T  V  M  :  G  A  D  I  D  E  K  S  I  R  K  D  N  A  E  E  L  V  I  A  L  A  E  A  K  V  Y  Y  L  F  S  I  T  G  V  F  G  Y  M  V  D  K  N  V  L  K  N  I  F  S  R  K  T  I  I  *  V  N  C  L  L  P  P  P  N  A  P  T  P  H  P  H  T  K  *  E  I  H  L  F  P  D  D  V  F  F  V  F  E  F  I  S  L  V  K  *  L  V  E  V  H  H  L  G  L  K  L  *  S  I  F  F  V  Q  V  T  *  N  K  D  L  R  S  V  C  Y  S  S  K  *  H  I  S  P  Y  K  S  K  K  A  R  S  N  F  S  A  V  I  R  G  V  L  L  I  I  V  *  N  M  I  S  I  R  R  S  K  F  N  I  L  V  I  G  *  D  L  L  F  W  H  S  L  G  I  F  C  V  P  T  N  F  Q  S  F  C  P  S  V  I  Y  V  M  E  F  P  F  D  G  *  G  </second_frame>
            <third_frame>   P  L  P  F  E  E  E  V  R  K  R  A  P  N  K  W  L  R  R  T  C  R  S  R :   *  S  W  V  L  P  Q  W  H  V  A  K  Y  *  R  T  W  V  M  N  L  Q  *  W :   V  L  T  L  M  K  R  A  L  G  K  I  M  Q  R  N  *  *  *  L  *  Q  R  Q  R  Y  T  T  S  S  L  L  P  V  C  L  V  I  W  L  I  K  M  F  S  K  I  F  F  L  E  K  R  L  F  K  L  I  V  S  S  H  H  L  M  P  L  L  H  T  L  I  L  S  K  K  S  T  C  F  L  M  T  F  F  L  S  S  S  S  F  H  W  *  S  N  W  *  K  F  T  I  *  V  *  N  Y  N  Q  F  F  L  S  K  *  H  E  T  K  I  F  V  V  Y  V  I  L  L  S  N  T  Y  R  P  I  K  V  K  R  P  G  V  I  L  V  Q  L  L  E  E  F  C  *  *  L  C  R  T  *  Y  Q  *  E  G  Q  N  S  I  F  L  *  L  D  E  I  Y  Y  F  G  I  P  L  A  S  F  V  F  R  L  T  S  N  H  S  A  H  Q  *  F  M  L  W  N  F  H  L  M  V  R  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97461" stop="97517"/>
                    <exon start="97653" stop="97724"/>
                    <exon start="98018" stop="98185"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>294</number_coding_nucleotides>
                  <number_encoded_amino_acids>98</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RRGEKESAKQMAPKNLSFKIILGSSSMARRKILADMGYEFTVMGADIDEKSIRKDNAEELVIALAEAKVYYLFSITGVFGYMVDKNVLKNIFSRKTII*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98082" stop="98300"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QRQRYTTSSLLPVCLVIWLIKMFSKIFFLEKRLFKLIVSSHHLMPLLHTLILSKKSTCFLMTFFLSSSSFHW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="103065" PGL_stop="106113"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="103065" e_stop="103173"/>
            <exon e_start="105509" e_stop="106113"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.726" acc_prob="0.967" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="103065" e_stop="103173" e_length="109"/>
          </exon>
          <intron i_serial="1" don_prob="0.726" acc_prob="0.967">
            <gDNA_intron_boundary i_start="103174" i_stop="105508" i_length="2335"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="105509" e_stop="106113" e_length="605"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103065" stop="103173"/>
              <exon start="105509" stop="106113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583077" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATTTCTTGTGTTGACGAACAGAGCCCTCGGAAAGCTCCACTGACCGGTGAACTGCGGATCTCCGGCGGTTTTTAGGTTTGCTGAGGTAGCGATACAGAGAAAGCCTG : CTGATTGATAAAAGTCATCCAATGGAAGCTAAATTCTTCCGCTTTCTCAAGATTGTTGGAGTTGGTTTCAAGGCTAGGGCAGAATCAGAAGGTCGTCTCTTGTACCTTAAGCTGGGTTACAGCCATGAGGTTGAACTGACCGTGCCTCCTGCAGTTCGTGTCTTCTGTTTCAAACCCAATGTGGTTTGCTGCACTGGGATTGACAAGTATAGGGTACACCAATTTGCTGCCTCTGTAAGGAGCTGTAAACCTCCTGAAGTTTACAAGGGCAAAGGTATTATGTACATTGATGAAGTGATAAAAAAGAAGCAGGGAAAGAAATCAAAATGAGAACCCATTAATCATGGTTCTTTCTTGGGCTTGGTACTTTTTATGATGCTAGACAATTTTCCTTTAATTATCTTTCCTATTTGTAATTTCCTAATGTAATTTTGTTTTCTGACTGCTTTGGTATTTTTAAAAGTTAGAGGAGTTGAAGATCTTTTACCTTGGTCACGGAAGTTGCTAAACATCTCAATGACAGTTTTTGTATCAACTTTTTTCATCCTTTCAAATGCTACAAATAAGTGATGGACGGTGTTGATGAATTTGTGGTCTTTATATCC</gDNA_template>
            <first_frame> *  F  L  V  L  T  N  R  A  L  G  K  L  H  *  P  V  N  C  G  S  P  A  V  F  R  F  A  E  V  A  I  Q  R  K  P   : A  D  *  *  K  S  S  N  G  S  *  I  L  P  L  S  Q  D  C  W  S  W  F  Q  G  *  G  R  I  R  R  S  S  L  V  P  *  A  G  L  Q  P  *  G  *  T  D  R  A  S  C  S  S  C  L  L  F  Q  T  Q  C  G  L  L  H  W  D  *  Q  V  *  G  T  P  I  C  C  L  C  K  E  L  *  T  S  *  S  L  Q  G  Q  R  Y  Y  V  H  *  *  S  D  K  K  E  A  G  K  E  I  K  M  R  T  H  *  S  W  F  F  L  G  L  G  T  F  Y  D  A  R  Q  F  S  F  N  Y  L  S  Y  L  *  F  P  N  V  I  L  F  S  D  C  F  G  I  F  K  S  *  R  S  *  R  S  F  T  L  V  T  E  V  A  K  H  L  N  D  S  F  C  I  N  F  F  H  P  F  K  C  Y  K  *  V  M  D  G  V  D  E  F  V  V  F  I  S </first_frame>
            <second_frame>  N  F  L  C  *  R  T  E  P  S  E  S  S  T  D  R  *  T  A  D  L  R  R  F  L  G  L  L  R  *  R  Y  R  E  S  L  :  L  I  D  K  S  H  P  M  E  A  K  F  F  R  F  L  K  I  V  G  V  G  F  K  A  R  A  E  S  E  G  R  L  L  Y  L  K  L  G  Y  S  H  E  V  E  L  T  V  P  P  A  V  R  V  F  C  F  K  P  N  V  V  C  C  T  G  I  D  K  Y  R  V  H  Q  F  A  A  S  V  R  S  C  K  P  P  E  V  Y  K  G  K  G  I  M  Y  I  D  E  V  I  K  K  K  Q  G  K  K  S  K  *  E  P  I  N  H  G  S  F  L  G  L  V  L  F  M  M  L  D  N  F  P  L  I  I  F  P  I  C  N  F  L  M  *  F  C  F  L  T  A  L  V  F  L  K  V  R  G  V  E  D  L  L  P  W  S  R  K  L  L  N  I  S  M  T  V  F  V  S  T  F  F  I  L  S  N  A  T  N  K  *  W  T  V  L  M  N  L  W  S  L  Y   </second_frame>
            <third_frame>   I  S  C  V  D  E  Q  S  P  R  K  A  P  L  T  G  E  L  R  I  S  G  G  F  *  V  C  *  G  S  D  T  E  K  A  C :   *  L  I  K  V  I  Q  W  K  L  N  S  S  A  F  S  R  L  L  E  L  V  S  R  L  G  Q  N  Q  K  V  V  S  C  T  L  S  W  V  T  A  M  R  L  N  *  P  C  L  L  Q  F  V  S  S  V  S  N  P  M  W  F  A  A  L  G  L  T  S  I  G  Y  T  N  L  L  P  L  *  G  A  V  N  L  L  K  F  T  R  A  K  V  L  C  T  L  M  K  *  *  K  R  S  R  E  R  N  Q  N  E  N  P  L  I  M  V  L  S  W  A  W  Y  F  L  *  C  *  T  I  F  L  *  L  S  F  L  F  V  I  S  *  C  N  F  V  F  *  L  L  W  Y  F  *  K  L  E  E  L  K  I  F  Y  L  G  H  G  S  C  *  T  S  Q  *  Q  F  L  Y  Q  L  F  S  S  F  Q  M  L  Q  I  S  D  G  R  C  *  *  I  C  G  L  Y  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103156" stop="103173"/>
                    <exon start="105509" stop="105838"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>345</number_coding_nucleotides>
                  <number_encoded_amino_acids>115</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RYRESLLIDKSHPMEAKFFRFLKIVGVGFKARAESEGRLLYLKLGYSHEVELTVPPAVRVFCFKPNVVCCTGIDKYRVHQFAASVRSCKPPEVYKGKGIMYIDEVIKKKQGKKSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="112386" PGL_stop="114020"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="112386" e_stop="112736"/>
            <exon e_start="112819" e_stop="112980"/>
            <exon e_start="113640" e_stop="113819"/>
            <exon e_start="113970" e_stop="114020"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.816" acc_prob="0.991" e_score="0.991"/>
          <exon-intron don_prob="0.970" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.860" acc_prob="0.986" e_score="1.000"/>
          <exon-only e_score="0.902"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="112386" e_stop="112736" e_length="351"/>
          </exon>
          <intron i_serial="1" don_prob="0.816" acc_prob="0.991">
            <gDNA_intron_boundary i_start="112737" i_stop="112818" i_length="82"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="112819" e_stop="112980" e_length="162"/>
          </exon>
          <intron i_serial="2" don_prob="0.970" acc_prob="0.989">
            <gDNA_intron_boundary i_start="112981" i_stop="113639" i_length="659"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="113640" e_stop="113819" e_length="180"/>
          </exon>
          <intron i_serial="3" don_prob="0.860" acc_prob="0.986">
            <gDNA_intron_boundary i_start="113820" i_stop="113969" i_length="150"/>
          </intron>
          <exon e_serial="4" e_score="0.902">
            <gDNA_exon_boundary e_start="113970" e_stop="114020" e_length="51"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112386" stop="112736"/>
              <exon start="112819" stop="112980"/>
              <exon start="113640" stop="113819"/>
              <exon start="113970" stop="114020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U567062" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112388" stop="112736"/>
              <exon start="112819" stop="112980"/>
              <exon start="113640" stop="113675"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596481" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCAGTGTTGAAGCTCGGATAGATTCCCTATTCCCTGTTCAAAGAGTTGCTAGTGTTAAAATCAGAGATTAGGCAAAAAAAAAAAAAGTTCAAAAATGTGGAGACAGGTCCGAAAATTTAGCAGTAACAGCAGCTTCAATGCGAAAGAGAAGAAATGGGATGCTCTGATCATCGGCGGTGGTCACAACGGCCTTACAGCTGCCGCGTATCTCGCTCGTTCCGGTCTCTCTGTTGCCGTTCTCGAGAGGCGCCACATCATAGGAGGTGCTGCTGTCACTGAAGAACTCATTCCCGGTTTCAAGTTTTCTCGTTGCAGTTACCTACAAAGCCTCCTTAGACCCTGCGTTATTAA : AGAATTGGAGCTGAAGAGACATGGATTGAAGCTACTGAAAAGGAGTCCTTCATCATTCACGCCTCGTCTTGACGGACGCTATCTTCTGCTTGGTTCTGACAAGGAGCAGAACTATTCTGAGATTTCAAAGTTTTCTAAATCTGATGCTGATGCTTACTCAAG : GTATGAGAGTCAACTCGACAAGTTCTGCGAGTTCATGGACCCACTTCTGGATTCGTCTACACCAGAAACTCTACAAGGCTCTTCACAACTCAATACTCGTATGAAGCACAAATTGCGTAATTCAGCGTTTTGGGCTAATTGTCTCCGTCGAGCACTCCACTTGGGACAAAAGGACCTAGT : GGACTTGATGGACCTTTTACTCGCTCCAGCTTCGAAGGTTTTGAATAACTG</gDNA_template>
            <first_frame> P  V  L  K  L  G  *  I  P  Y  S  L  F  K  E  L  L  V  L  K  S  E  I  R  Q  K  K  K  K  F  K  N  V  E  T  G  P  K  I  *  Q  *  Q  Q  L  Q  C  E  R  E  E  M  G  C  S  D  H  R  R  W  S  Q  R  P  Y  S  C  R  V  S  R  S  F  R  S  L  C  C  R  S  R  E  A  P  H  H  R  R  C  C  C  H  *  R  T  H  S  R  F  Q  V  F  S  L  Q  L  P  T  K  P  P  *  T  L  R  Y  *  :  R  I  G  A  E  E  T  W  I  E  A  T  E  K  E  S  F  I  I  H  A  S  S  *  R  T  L  S  S  A  W  F  *  Q  G  A  E  L  F  *  D  F  K  V  F  *  I  *  C  *  C  L  L  K  :  V  *  E  S  T  R  Q  V  L  R  V  H  G  P  T  S  G  F  V  Y  T  R  N  S  T  R  L  F  T  T  Q  Y  S  Y  E  A  Q  I  A  *  F  S  V  L  G  *  L  S  P  S  S  T  P  L  G  T  K  G  P  S  :  G  L  D  G  P  F  T  R  S  S  F  E  G  F  E  *  L </first_frame>
            <second_frame>  Q  C  *  S  S  D  R  F  P  I  P  C  S  K  S  C  *  C  *  N  Q  R  L  G  K  K  K  K  S  S  K  M  W  R  Q  V  R  K  F  S  S  N  S  S  F  N  A  K  E  K  K  W  D  A  L  I  I  G  G  G  H  N  G  L  T  A  A  A  Y  L  A  R  S  G  L  S  V  A  V  L  E  R  R  H  I  I  G  G  A  A  V  T  E  E  L  I  P  G  F  K  F  S  R  C  S  Y  L  Q  S  L  L  R  P  C  V  I  K :   E  L  E  L  K  R  H  G  L  K  L  L  K  R  S  P  S  S  F  T  P  R  L  D  G  R  Y  L  L  L  G  S  D  K  E  Q  N  Y  S  E  I  S  K  F  S  K  S  D  A  D  A  Y  S  R :   Y  E  S  Q  L  D  K  F  C  E  F  M  D  P  L  L  D  S  S  T  P  E  T  L  Q  G  S  S  Q  L  N  T  R  M  K  H  K  L  R  N  S  A  F  W  A  N  C  L  R  R  A  L  H  L  G  Q  K  D  L  V :   D  L  M  D  L  L  L  A  P  A  S  K  V  L  N  N   </second_frame>
            <third_frame>   S  V  E  A  R  I  D  S  L  F  P  V  Q  R  V  A  S  V  K  I  R  D  *  A  K  K  K  K  V  Q  K  C  G  D  R  S  E  N  L  A  V  T  A  A  S  M  R  K  R  R  N  G  M  L  *  S  S  A  V  V  T  T  A  L  Q  L  P  R  I  S  L  V  P  V  S  L  L  P  F  S  R  G  A  T  S  *  E  V  L  L  S  L  K  N  S  F  P  V  S  S  F  L  V  A  V  T  Y  K  A  S  L  D  P  A  L  L   : K  N  W  S  *  R  D  M  D  *  S  Y  *  K  G  V  L  H  H  S  R  L  V  L  T  D  A  I  F  C  L  V  L  T  R  S  R  T  I  L  R  F  Q  S  F  L  N  L  M  L  M  L  T  Q   : G  M  R  V  N  S  T  S  S  A  S  S  W  T  H  F  W  I  R  L  H  Q  K  L  Y  K  A  L  H  N  S  I  L  V  *  S  T  N  C  V  I  Q  R  F  G  L  I  V  S  V  E  H  S  T  W  D  K  R  T  *   : W  T  *  W  T  F  Y  S  L  Q  L  R  R  F  *  I  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="112444" stop="112736"/>
                    <exon start="112819" stop="112980"/>
                    <exon start="113640" stop="113819"/>
                    <exon start="113970" stop="114018"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>684</number_coding_nucleotides>
                  <number_encoded_amino_acids>228</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NQRLGKKKKSSKMWRQVRKFSSNSSFNAKEKKWDALIIGGGHNGLTAAAYLARSGLSVAVLERRHIIGGAAVTEELIPGFKFSRCSYLQSLLRPCVIKELELKRHGLKLLKRSPSSFTPRLDGRYLLLGSDKEQNYSEISKFSKSDADAYSRYESQLDKFCEFMDPLLDSSTPETLQGSSQLNTRMKHKLRNSAFWANCLRRALHLGQKDLVDLMDLLLAPASKVLNN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="114593" PGL_stop="115306"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="114593" e_stop="115306"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="114593" e_stop="115306" e_length="714"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114593" stop="115306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566620" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGTGTATGTATTAATTAATCGTGTTGATGTACTGGAAGCTGCTACTACATGTTCTTATGCTGTGTACAATTTTGTTACATTCCTCAAAAGACGTTTCGAAAAATTCTCACATCTTTAGCATAATCCCTTCTGGTGTCACTAGCTTACTAATTGTGTGTGCTTGACTGAAATATCACAGGCAGATGTTCTGAAAGTAACTCTTGCAACTGATGCAGTGATAGGGACCACGGTAAGCTTTTTTCATGTGGGTTGTTCCAGAATGTGTCGAATGATGCATGGAGGAACAGTCAATTGCTGCATACATTGTTTGCATCTATAAAGACTTGTAATGTATATCTAGGATCCCACATATATATGATTCGGCAGTGCTGAAAAGTAAATGTTCTGTTATTCTGCATTACCATATATTTAGTGAAAATGATTGAATGTTTTAAGTGAAAAATGTGCTTACTTATGGGATCATGTAGAAGTCATGTCTTTGCAGCAAATATTGGACGTTTCACATGGCCCATGGTTTAGAAATTTCTTTTAAGTTATATGCATATATCCGCCATACATTTACTGGCAGTTCTCCATCTGCATGAAGTAGCAGGCTTGAGTACCTCTTGGACCACTCTGAAATTCTTACAAAAACATGTAGGACTAAGAGTTTTTTGAGTCTCTAGTCAGGCAGGAAAGAAAAACAGGTTCTTTTAGTGTTCCCCGGGTTTTGT</gDNA_template>
            <first_frame> W  C  M  Y  *  L  I  V  L  M  Y  W  K  L  L  L  H  V  L  M  L  C  T  I  L  L  H  S  S  K  D  V  S  K  N  S  H  I  F  S  I  I  P  S  G  V  T  S  L  L  I  V  C  A  *  L  K  Y  H  R  Q  M  F  *  K  *  L  L  Q  L  M  Q  *  *  G  P  R  *  A  F  F  M  W  V  V  P  E  C  V  E  *  C  M  E  E  Q  S  I  A  A  Y  I  V  C  I  Y  K  D  L  *  C  I  S  R  I  P  H  I  Y  D  S  A  V  L  K  S  K  C  S  V  I  L  H  Y  H  I  F  S  E  N  D  *  M  F  *  V  K  N  V  L  T  Y  G  I  M  *  K  S  C  L  C  S  K  Y  W  T  F  H  M  A  H  G  L  E  I  S  F  K  L  Y  A  Y  I  R  H  T  F  T  G  S  S  P  S  A  *  S  S  R  L  E  Y  L  L  D  H  S  E  I  L  T  K  T  C  R  T  K  S  F  L  S  L  *  S  G  R  K  E  K  Q  V  L  L  V  F  P  G  F  C </first_frame>
            <second_frame>  G  V  C  I  N  *  S  C  *  C  T  G  S  C  Y  Y  M  F  L  C  C  V  Q  F  C  Y  I  P  Q  K  T  F  R  K  I  L  T  S  L  A  *  S  L  L  V  S  L  A  Y  *  L  C  V  L  D  *  N  I  T  G  R  C  S  E  S  N  S  C  N  *  C  S  D  R  D  H  G  K  L  F  S  C  G  L  F  Q  N  V  S  N  D  A  W  R  N  S  Q  L  L  H  T  L  F  A  S  I  K  T  C  N  V  Y  L  G  S  H  I  Y  M  I  R  Q  C  *  K  V  N  V  L  L  F  C  I  T  I  Y  L  V  K  M  I  E  C  F  K  *  K  M  C  L  L  M  G  S  C  R  S  H  V  F  A  A  N  I  G  R  F  T  W  P  M  V  *  K  F  L  L  S  Y  M  H  I  S  A  I  H  L  L  A  V  L  H  L  H  E  V  A  G  L  S  T  S  W  T  T  L  K  F  L  Q  K  H  V  G  L  R  V  F  *  V  S  S  Q  A  G  K  K  N  R  F  F  *  C  S  P  G  F   </second_frame>
            <third_frame>   V  Y  V  L  I  N  R  V  D  V  L  E  A  A  T  T  C  S  Y  A  V  Y  N  F  V  T  F  L  K  R  R  F  E  K  F  S  H  L  *  H  N  P  F  W  C  H  *  L  T  N  C  V  C  L  T  E  I  S  Q  A  D  V  L  K  V  T  L  A  T  D  A  V  I  G  T  T  V  S  F  F  H  V  G  C  S  R  M  C  R  M  M  H  G  G  T  V  N  C  C  I  H  C  L  H  L  *  R  L  V  M  Y  I  *  D  P  T  Y  I  *  F  G  S  A  E  K  *  M  F  C  Y  S  A  L  P  Y  I  *  *  K  *  L  N  V  L  S  E  K  C  A  Y  L  W  D  H  V  E  V  M  S  L  Q  Q  I  L  D  V  S  H  G  P  W  F  R  N  F  F  *  V  I  C  I  Y  P  P  Y  I  Y  W  Q  F  S  I  C  M  K  *  Q  A  *  V  P  L  G  P  L  *  N  S  Y  K  N  M  *  D  *  E  F  F  E  S  L  V  R  Q  E  R  K  T  G  S  F  S  V  P  R  V  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0215M12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="+" PGL_start="118294" PGL_stop="122212"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="118294" e_stop="118395"/>
            <exon e_start="119114" e_stop="119226"/>
            <exon e_start="120763" e_stop="120842"/>
            <exon e_start="121045" e_stop="121165"/>
            <exon e_start="121682" e_stop="122212"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="1.000" e_score="0.980"/>
          <exon-intron don_prob="0.998" acc_prob="0.533" e_score="1.000"/>
          <exon-intron don_prob="0.823" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.644" acc_prob="0.973" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="118294" e_stop="118395" e_length="102"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="1.000">
            <gDNA_intron_boundary i_start="118396" i_stop="119113" i_length="718"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="119114" e_stop="119226" e_length="113"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.533">
            <gDNA_intron_boundary i_start="119227" i_stop="120762" i_length="1536"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="120763" e_stop="120842" e_length="80"/>
          </exon>
          <intron i_serial="3" don_prob="0.823" acc_prob="0.967">
            <gDNA_intron_boundary i_start="120843" i_stop="121044" i_length="202"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="121045" e_stop="121165" e_length="121"/>
          </exon>
          <intron i_serial="4" don_prob="0.644" acc_prob="0.973">
            <gDNA_intron_boundary i_start="121166" i_stop="121681" i_length="516"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="121682" e_stop="122212" e_length="531"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="118294" stop="118395"/>
              <exon start="119114" stop="119226"/>
              <exon start="120763" stop="120842"/>
              <exon start="121045" stop="121165"/>
              <exon start="121682" stop="122212"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572262" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAATTTGGCCGTTGACAGATTGCCACAGTTCCAATGCTGTAATTTAAGTCATCCAGATGCTGGTCCACAGCATGGTGGTACCATTCACATAGGGCCAGAGAG : CATAGAAGAGATGCACAGTGCTGCACAGGATGCTGAAAATGGCTTACCATCTCAACGGCCCATAATTGAGATGACAATTCCCACTGTCTTTGACAAGACAATATCTCCATCTG : GAAAGCATGTGATTGGTTTATTCATCCAGTACACACCTTATAAACCCTCTGATGGCAGCTGGGAAAATCCTGTATATAGA : GAATCATTCGCTCAGAGATGCTTTAGCATGATAGATGAATATGCTCCTGGATTTAGCTCATCAATTATCGGGTATGATATGTTGACTCCTCCAGACCTCGAAAGAGAAATTGGTTTGACAG : GAGGCAATATATTCCACGGATCCATGGGATTAGATTCTCTGTTTTTAATGCGGCCAGTGAAAGGATGGTAATGGTTCTGAATGCACAAGTCCTTCAAGGACTCAAGTCCATGAAATGATGATTTTTGCTATTATCTTAACATTGAATTGCAGGTCAAATTATCGGACTCCAATTGAAGGCCTATACTTGTGTGGCAGCGGGACACATCCCGGTGGTGGAGTAATGGGCGCCCCAGGACGCAATGCTGCGCATGTTGTCATTGAGGACTTCAAGAAATCATGAAGCTTCTCTTGTGTGATTCTTTTGACGAGTTCAATCAGTTAAAATAATGACATCTAGTCTAAAACACTCTGGTGTTATAGCCAAATATTGCGAATTAGTTGCTTAAGAGTCTATTTGAAGTCTATTAAATATTGAAGTCAGTTTGACTGATCACAAGCGCAAATCTCTTCGATTGAAGAATCTTCAGAATGAGTGAATCCCCTCAATGTAAAGAATAATGTCATGCTGGGAACGGGAAAATAAGTTAAG</gDNA_template>
            <first_frame> Q  F  G  R  *  Q  I  A  T  V  P  M  L  *  F  K  S  S  R  C  W  S  T  A  W  W  Y  H  S  H  R  A  R  E  :  H  R  R  D  A  Q  C  C  T  G  C  *  K  W  L  T  I  S  T  A  H  N  *  D  D  N  S  H  C  L  *  Q  D  N  I  S  I  W :   K  A  C  D  W  F  I  H  P  V  H  T  L  *  T  L  *  W  Q  L  G  K  S  C  I  *   : R  I  I  R  S  E  M  L  *  H  D  R  *  I  C  S  W  I  *  L  I  N  Y  R  V  *  Y  V  D  S  S  R  P  R  K  R  N  W  F  D  R :   R  Q  Y  I  P  R  I  H  G  I  R  F  S  V  F  N  A  A  S  E  R  M  V  M  V  L  N  A  Q  V  L  Q  G  L  K  S  M  K  *  *  F  L  L  L  S  *  H  *  I  A  G  Q  I  I  G  L  Q  L  K  A  Y  T  C  V  A  A  G  H  I  P  V  V  E  *  W  A  P  Q  D  A  M  L  R  M  L  S  L  R  T  S  R  N  H  E  A  S  L  V  *  F  F  *  R  V  Q  S  V  K  I  M  T  S  S  L  K  H  S  G  V  I  A  K  Y  C  E  L  V  A  *  E  S  I  *  S  L  L  N  I  E  V  S  L  T  D  H  K  R  K  S  L  R  L  K  N  L  Q  N  E  *  I  P  S  M  *  R  I  M  S  C  W  E  R  E  N  K  L   </first_frame>
            <second_frame>  N  L  A  V  D  R  L  P  Q  F  Q  C  C  N  L  S  H  P  D  A  G  P  Q  H  G  G  T  I  H  I  G  P  E  S :   I  E  E  M  H  S  A  A  Q  D  A  E  N  G  L  P  S  Q  R  P  I  I  E  M  T  I  P  T  V  F  D  K  T  I  S  P  S   : G  K  H  V  I  G  L  F  I  Q  Y  T  P  Y  K  P  S  D  G  S  W  E  N  P  V  Y  R  :  E  S  F  A  Q  R  C  F  S  M  I  D  E  Y  A  P  G  F  S  S  S  I  I  G  Y  D  M  L  T  P  P  D  L  E  R  E  I  G  L  T   : G  G  N  I  F  H  G  S  M  G  L  D  S  L  F  L  M  R  P  V  K  G  W  *  W  F  *  M  H  K  S  F  K  D  S  S  P  *  N  D  D  F  C  Y  Y  L  N  I  E  L  Q  V  K  L  S  D  S  N  *  R  P  I  L  V  W  Q  R  D  T  S  R  W  W  S  N  G  R  P  R  T  Q  C  C  A  C  C  H  *  G  L  Q  E  I  M  K  L  L  L  C  D  S  F  D  E  F  N  Q  L  K  *  *  H  L  V  *  N  T  L  V  L  *  P  N  I  A  N  *  L  L  K  S  L  F  E  V  Y  *  I  L  K  S  V  *  L  I  T  S  A  N  L  F  D  *  R  I  F  R  M  S  E  S  P  Q  C  K  E  *  C  H  A  G  N  G  K  I  S  *  </second_frame>
            <third_frame>   I  W  P  L  T  D  C  H  S  S  N  A  V  I  *  V  I  Q  M  L  V  H  S  M  V  V  P  F  T  *  G  Q  R   : A  *  K  R  C  T  V  L  H  R  M  L  K  M  A  Y  H  L  N  G  P  *  L  R  *  Q  F  P  L  S  L  T  R  Q  Y  L  H  L  :  E  S  M  *  L  V  Y  S  S  S  T  H  L  I  N  P  L  M  A  A  G  K  I  L  Y  I  E :   N  H  S  L  R  D  A  L  A  *  *  M  N  M  L  L  D  L  A  H  Q  L  S  G  M  I  C  *  L  L  Q  T  S  K  E  K  L  V  *  Q  :  E  A  I  Y  S  T  D  P  W  D  *  I  L  C  F  *  C  G  Q  *  K  D  G  N  G  S  E  C  T  S  P  S  R  T  Q  V  H  E  M  M  I  F  A  I  I  L  T  L  N  C  R  S  N  Y  R  T  P  I  E  G  L  Y  L  C  G  S  G  T  H  P  G  G  G  V  M  G  A  P  G  R  N  A  A  H  V  V  I  E  D  F  K  K  S  *  S  F  S  C  V  I  L  L  T  S  S  I  S  *  N  N  D  I  *  S  K  T  L  W  C  Y  S  Q  I  L  R  I  S  C  L  R  V  Y  L  K  S  I  K  Y  *  S  Q  F  D  *  S  Q  A  Q  I  S  S  I  E  E  S  S  E  *  V  N  P  L  N  V  K  N  N  V  M  L  G  T  G  K  *  V  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="118295" stop="118395"/>
                    <exon start="119114" stop="119226"/>
                    <exon start="120763" stop="120842"/>
                    <exon start="121045" stop="121165"/>
                    <exon start="121682" stop="121752"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>483</number_coding_nucleotides>
                  <number_encoded_amino_acids>161</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLAVDRLPQFQCCNLSHPDAGPQHGGTIHIGPESIEEMHSAAQDAENGLPSQRPIIEMTIPTVFDKTISPSGKHVIGLFIQYTPYKPSDGSWENPVYRESFAQRCFSMIDEYAPGFSSSIIGYDMLTPPDLEREIGLTGGNIFHGSMGLDSLFLMRPVKGW*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121742" stop="121963"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KDGNGSECTSPSRTQVHEMMIFAIILTLNCRSNYRTPIEGLYLCGSGTHPGGGVMGAPGRNAAHVVIEDFKKS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="-" PGL_start="125564" PGL_stop="123238"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="125564" e_stop="125447"/>
            <exon e_start="125343" e_stop="125301"/>
            <exon e_start="125219" e_stop="125155"/>
            <exon e_start="124562" e_stop="124466"/>
            <exon e_start="124299" e_stop="124229"/>
            <exon e_start="123644" e_stop="123553"/>
            <exon e_start="123447" e_stop="123238"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.443" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.600" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.848" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="125564" e_stop="125447" e_length="118"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.443">
            <gDNA_intron_boundary i_start="125446" i_stop="125344" i_length="103"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="125343" e_stop="125301" e_length="43"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.985">
            <gDNA_intron_boundary i_start="125300" i_stop="125220" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="125219" e_stop="125155" e_length="65"/>
          </exon>
          <intron i_serial="3" don_prob="0.974" acc_prob="0.600">
            <gDNA_intron_boundary i_start="125154" i_stop="124563" i_length="592"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="124562" e_stop="124466" e_length="97"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.848">
            <gDNA_intron_boundary i_start="124465" i_stop="124300" i_length="166"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="124299" e_stop="124229" e_length="71"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.979">
            <gDNA_intron_boundary i_start="124228" i_stop="123645" i_length="584"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="123644" e_stop="123553" e_length="92"/>
          </exon>
          <intron i_serial="6" don_prob="0.990" acc_prob="0.992">
            <gDNA_intron_boundary i_start="123552" i_stop="123448" i_length="105"/>
          </intron>
          <exon e_serial="7" e_score="0.976">
            <gDNA_exon_boundary e_start="123447" e_stop="123238" e_length="210"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="125564" stop="125447"/>
              <exon start="125343" stop="125301"/>
              <exon start="125219" stop="125155"/>
              <exon start="124562" stop="124466"/>
              <exon start="124299" stop="124229"/>
              <exon start="123644" stop="123553"/>
              <exon start="123447" stop="123238"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572982" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAAAAGAGTAGCTTTGCCAGTTCTTCTATTGTGAGATTTACAGGAAGAATGATAAAGGCGGTAATGGTGATTAACACCTTCGGCAAGCCTCGCCTTTCGAAATTTTACGAATTTCAG : CCAGTGGAGAAGCAACAAGAGCTCATCCGCCATGTCTACACAG : TCTTAAGCAACAGGCCTGACAATGTGAGCAATTTTATTCGGAGCTTAGGGGCAATTTTCGGTCCG : GATACAAGGCTCGTGTATAAGCACTATGCTACCTTATATTTCGTGTTTCTATTTGATAACTCTGAGAATGAGTTGGCCATGCTCGACTTAATACAAG : TTTTTGTAGAAACTCTGGACAAATGCTTCAGAAGTGTATGCGAGCTTGATGTAGTATTCAATTATAGCAAG : ATGCATATCATTCTAGATGAAATAATTTTAGGTGGTCAAGTGCTAGAAACAGATTCTGTTGAAGTCGTGAAAGCAGTGGAAGAGATCTCAAA : ATTAGAGTCAACCACTAGTGCTGGCACATTGATCAACAAATCTATTCCGTCTTGGTGGGCTAGATAACACATGGTTCCTCTGTACATTACCATATCTTAGTGTTGAAAATGAACTATAGGGAATATGACATGTATACTTTTTCAGTTTGGCATGTTAACTGACTTCTCGATTTGTAATCATAGCTGGATACACCCTTCTCTGAGTTATCA</gDNA_template>
            <first_frame> T  K  E  *  L  C  Q  F  F  Y  C  E  I  Y  R  K  N  D  K  G  G  N  G  D  *  H  L  R  Q  A  S  P  F  E  I  L  R  I  S   : A  S  G  E  A  T  R  A  H  P  P  C  L  H  S :   L  K  Q  Q  A  *  Q  C  E  Q  F  Y  S  E  L  R  G  N  F  R  S   : G  Y  K  A  R  V  *  A  L  C  Y  L  I  F  R  V  S  I  *  *  L  *  E  *  V  G  H  A  R  L  N  T  S :   F  C  R  N  S  G  Q  M  L  Q  K  C  M  R  A  *  C  S  I  Q  L  *  Q   : D  A  Y  H  S  R  *  N  N  F  R  W  S  S  A  R  N  R  F  C  *  S  R  E  S  S  G  R  D  L  K  :  I  R  V  N  H  *  C  W  H  I  D  Q  Q  I  Y  S  V  L  V  G  *  I  T  H  G  S  S  V  H  Y  H  I  L  V  L  K  M  N  Y  R  E  Y  D  M  Y  T  F  S  V  W  H  V  N  *  L  L  D  L  *  S  *  L  D  T  P  F  S  E  L  S </first_frame>
            <second_frame>  Q  K  S  S  F  A  S  S  S  I  V  R  F  T  G  R  M  I  K  A  V  M  V  I  N  T  F  G  K  P  R  L  S  K  F  Y  E  F  Q  :  P  V  E  K  Q  Q  E  L  I  R  H  V  Y  T   : V  L  S  N  R  P  D  N  V  S  N  F  I  R  S  L  G  A  I  F  G  P  :  D  T  R  L  V  Y  K  H  Y  A  T  L  Y  F  V  F  L  F  D  N  S  E  N  E  L  A  M  L  D  L  I  Q   : V  F  V  E  T  L  D  K  C  F  R  S  V  C  E  L  D  V  V  F  N  Y  S  K  :  M  H  I  I  L  D  E  I  I  L  G  G  Q  V  L  E  T  D  S  V  E  V  V  K  A  V  E  E  I  S  K :   L  E  S  T  T  S  A  G  T  L  I  N  K  S  I  P  S  W  W  A  R  *  H  M  V  P  L  Y  I  T  I  S  *  C  *  K  *  T  I  G  N  M  T  C  I  L  F  Q  F  G  M  L  T  D  F  S  I  C  N  H  S  W  I  H  P  S  L  S  Y   </second_frame>
            <third_frame>   K  R  V  A  L  P  V  L  L  L  *  D  L  Q  E  E  *  *  R  R  *  W  *  L  T  P  S  A  S  L  A  F  R  N  F  T  N  F  S :   Q  W  R  S  N  K  S  S  S  A  M  S  T  Q  :  S  *  A  T  G  L  T  M  *  A  I  L  F  G  A  *  G  Q  F  S  V  R :   I  Q  G  S  C  I  S  T  M  L  P  Y  I  S  C  F  Y  L  I  T  L  R  M  S  W  P  C  S  T  *  Y  K  :  F  L  *  K  L  W  T  N  A  S  E  V  Y  A  S  L  M  *  Y  S  I  I  A  R :   C  I  S  F  *  M  K  *  F  *  V  V  K  C  *  K  Q  I  L  L  K  S  *  K  Q  W  K  R  S  Q   : N  *  S  Q  P  L  V  L  A  H  *  S  T  N  L  F  R  L  G  G  L  D  N  T  W  F  L  C  T  L  P  Y  L  S  V  E  N  E  L  *  G  I  *  H  V  Y  F  F  S  L  A  C  *  L  T  S  R  F  V  I  I  A  G  Y  T  L  L  *  V  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="-"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="125563" stop="125447"/>
                    <exon start="125343" stop="125301"/>
                    <exon start="125219" stop="125155"/>
                    <exon start="124562" stop="124466"/>
                    <exon start="124299" stop="124229"/>
                    <exon start="123644" stop="123553"/>
                    <exon start="123447" stop="123381"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>549</number_coding_nucleotides>
                  <number_encoded_amino_acids>183</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QKSSFASSSIVRFTGRMIKAVMVINTFGKPRLSKFYEFQPVEKQQELIRHVYTVLSNRPDNVSNFIRSLGAIFGPDTRLVYKHYATLYFVFLFDNSENELAMLDLIQVFVETLDKCFRSVCELDVVFNYSKMHIILDEIILGGQVLETDSVEVVKAVEEISKLESTTSAGTLINKSIPSWWAR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="+" PGL_start="126729" PGL_stop="128609"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="126729" e_stop="126998"/>
            <exon e_start="127658" e_stop="127819"/>
            <exon e_start="128585" e_stop="128609"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.972" acc_prob="1.000" e_score="0.996"/>
          <exon-intron don_prob="0.952" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="126729" e_stop="126998" e_length="270"/>
          </exon>
          <intron i_serial="1" don_prob="0.972" acc_prob="1.000">
            <gDNA_intron_boundary i_start="126999" i_stop="127657" i_length="659"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="127658" e_stop="127819" e_length="162"/>
          </exon>
          <intron i_serial="2" don_prob="0.952" acc_prob="0.993">
            <gDNA_intron_boundary i_start="127820" i_stop="128584" i_length="765"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="128585" e_stop="128609" e_length="25"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126729" stop="126998"/>
              <exon start="127658" stop="127819"/>
              <exon start="128585" stop="128609"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U601298" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTCTTCTTTCGGGGTTTTAGCAGGGTTTTAGACAAAGTGCCTAAATCCGCCTGTTCTTTTTCAATTAGTTCTTGTCAAGAAAGAATAATTCTTACAGAAATTGTAGAGCAATGGCATCGGATACATTAACTTACACGGACTCGATGAACTTTAAGGTGAGGGAACTGTTGAAGGAGGTTCAGTTCGAATGCTCGCCGGAAACCACTGCAACTGTGGACAATGTTGTTTCTGGCATAAAAGAAGCAATTGATAAGATCCCCGAGGACCAG : GTTAAGGCTAACTTGGCGCCGGGGTTTGTTAGAGATATCAATGCGGATAAGGTGGAGTTCACATTTAAGAAGCCAAAATCTTTGGAAATTGGCGGGAGTTATTCTATACATTGTGTTACCAAACGCGATCTAAATGTTGATCTTTTTCTTCACTTGCCAAAG : GAGTGCTTTTATGAAAAAGATTACC</gDNA_template>
            <first_frame> L  L  L  S  G  F  *  Q  G  F  R  Q  S  A  *  I  R  L  F  F  F  N  *  F  L  S  R  K  N  N  S  Y  R  N  C  R  A  M  A  S  D  T  L  T  Y  T  D  S  M  N  F  K  V  R  E  L  L  K  E  V  Q  F  E  C  S  P  E  T  T  A  T  V  D  N  V  V  S  G  I  K  E  A  I  D  K  I  P  E  D  Q  :  V  K  A  N  L  A  P  G  F  V  R  D  I  N  A  D  K  V  E  F  T  F  K  K  P  K  S  L  E  I  G  G  S  Y  S  I  H  C  V  T  K  R  D  L  N  V  D  L  F  L  H  L  P  K  :  E  C  F  Y  E  K  D  Y  </first_frame>
            <second_frame>  F  F  F  R  G  F  S  R  V  L  D  K  V  P  K  S  A  C  S  F  S  I  S  S  C  Q  E  R  I  I  L  T  E  I  V  E  Q  W  H  R  I  H  *  L  T  R  T  R  *  T  L  R  *  G  N  C  *  R  R  F  S  S  N  A  R  R  K  P  L  Q  L  W  T  M  L  F  L  A  *  K  K  Q  L  I  R  S  P  R  T  R :   L  R  L  T  W  R  R  G  L  L  E  I  S  M  R  I  R  W  S  S  H  L  R  S  Q  N  L  W  K  L  A  G  V  I  L  Y  I  V  L  P  N  A  I  *  M  L  I  F  F  F  T  C  Q  R :   S  A  F  M  K  K  I  T </second_frame>
            <third_frame>   S  S  F  G  V  L  A  G  F  *  T  K  C  L  N  P  P  V  L  F  Q  L  V  L  V  K  K  E  *  F  L  Q  K  L  *  S  N  G  I  G  Y  I  N  L  H  G  L  D  E  L  *  G  E  G  T  V  E  G  G  S  V  R  M  L  A  G  N  H  C  N  C  G  Q  C  C  F  W  H  K  R  S  N  *  *  D  P  R  G  P   : G  *  G  *  L  G  A  G  V  C  *  R  Y  Q  C  G  *  G  G  V  H  I  *  E  A  K  I  F  G  N  W  R  E  L  F  Y  T  L  C  Y  Q  T  R  S  K  C  *  S  F  S  S  L  A  K   : G  V  L  L  *  K  R  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="126798" stop="126998"/>
                    <exon start="127658" stop="127819"/>
                    <exon start="128585" stop="128608"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>387</number_coding_nucleotides>
                  <number_encoded_amino_acids>129</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLSRKNNSYRNCRAMASDTLTYTDSMNFKVRELLKEVQFECSPETTATVDNVVSGIKEAIDKIPEDQVKANLAPGFVRDINADKVEFTFKKPKSLEIGGSYSIHCVTKRDLNVDLFLHLPKECFYEKDY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="+" PGL_start="133693" PGL_stop="138032"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="133693" e_stop="133719"/>
            <exon e_start="133804" e_stop="133928"/>
            <exon e_start="134066" e_stop="134186"/>
            <exon e_start="134259" e_stop="134396"/>
            <exon e_start="136120" e_stop="136216"/>
            <exon e_start="136330" e_stop="136455"/>
            <exon e_start="137972" e_stop="138032"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.820" acc_prob="0.979" e_score="0.926"/>
          <exon-intron don_prob="0.921" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.537" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.946" e_score="1.000"/>
          <exon-intron don_prob="0.375" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.901" e_score="0.992"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.926">
            <gDNA_exon_boundary e_start="133693" e_stop="133719" e_length="27"/>
          </exon>
          <intron i_serial="1" don_prob="0.820" acc_prob="0.979">
            <gDNA_intron_boundary i_start="133720" i_stop="133803" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="133804" e_stop="133928" e_length="125"/>
          </exon>
          <intron i_serial="2" don_prob="0.921" acc_prob="0.998">
            <gDNA_intron_boundary i_start="133929" i_stop="134065" i_length="137"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="134066" e_stop="134186" e_length="121"/>
          </exon>
          <intron i_serial="3" don_prob="0.537" acc_prob="0.985">
            <gDNA_intron_boundary i_start="134187" i_stop="134258" i_length="72"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="134259" e_stop="134396" e_length="138"/>
          </exon>
          <intron i_serial="4" don_prob="0.979" acc_prob="0.946">
            <gDNA_intron_boundary i_start="134397" i_stop="136119" i_length="1723"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="136120" e_stop="136216" e_length="97"/>
          </exon>
          <intron i_serial="5" don_prob="0.375" acc_prob="1.000">
            <gDNA_intron_boundary i_start="136217" i_stop="136329" i_length="113"/>
          </intron>
          <exon e_serial="6" e_score="0.992">
            <gDNA_exon_boundary e_start="136330" e_stop="136455" e_length="126"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.901">
            <gDNA_intron_boundary i_start="136456" i_stop="137971" i_length="1516"/>
          </intron>
          <exon e_serial="7" e_score="0.984">
            <gDNA_exon_boundary e_start="137972" e_stop="138032" e_length="61"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133693" stop="133719"/>
              <exon start="133804" stop="133928"/>
              <exon start="134066" stop="134186"/>
              <exon start="134259" stop="134396"/>
              <exon start="136120" stop="136216"/>
              <exon start="136330" stop="136455"/>
              <exon start="137972" stop="138032"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573389" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCATTTCTTCTTAGAATTGCTGAGAG : TCTGCAGAACAATTGGGGGATGATGTTTACAGCTACAGAAGATGATGTAGATGTTCTAATGTCTGGCTATGCATTCCGCCTTAAAATTTCTCATGAAAGGGCTCTTGGTCTGGTGACTGGGCAAA : GTAATAACAGTCGACATCAATGGAGCCTCTCTGCTGACAGAAAACTTCTTCTGCAACACCAACATGCGAGCAAGATCAATGCTTTAAGGGGTCGTTATCCTATATATGGACCAATAGTTCG : GCTAGCTAAAAGATGGGTCTCTGCACATCTATTATCCACGGTGCTGACAGAGGAGGCAGTTGAACTATTGGTTTCAAATCTTTTCTTGAGACCTTTGCCATTTGAACCTCCTTTCTCCCGAATAACAGGATTTTTGAG : GTTCTTACGATTATTATCGGAATATGATTGGGCCTTTTCTCCCTTAATCGTTGATTTTGATGGTGACTTTTCAACTGAGGAGAAAAATAAAATTAAT : GAGAATTTCATGAGAAGTAGAGAAGAGCATGAAAAGGACACACAGAAATCAAGTCCTGCAATGTTTTTAGCTACTAAATATGACGTTGCATCTGAAGCTTGGACAAGATCCTCACCAACTACAGCA : GAGCTAAGACGACTGGTGGCTTATTCAACTAGCAGTGCGAATTTGTTGACCAAACTGATTA</gDNA_template>
            <first_frame> C  I  S  S  *  N  C  *  E  :  S  A  E  Q  L  G  D  D  V  Y  S  Y  R  R  *  C  R  C  S  N  V  W  L  C  I  P  P  *  N  F  S  *  K  G  S  W  S  G  D  W  A  K :   *  *  Q  S  T  S  M  E  P  L  C  *  Q  K  T  S  S  A  T  P  T  C  E  Q  D  Q  C  F  K  G  S  L  S  Y  I  W  T  N  S  S  :  A  S  *  K  M  G  L  C  T  S  I  I  H  G  A  D  R  G  G  S  *  T  I  G  F  K  S  F  L  E  T  F  A  I  *  T  S  F  L  P  N  N  R  I  F  E  :  V  L  T  I  I  I  G  I  *  L  G  L  F  S  L  N  R  *  F  *  W  *  L  F  N  *  G  E  K  *  N  *   : *  E  F  H  E  K  *  R  R  A  *  K  G  H  T  E  I  K  S  C  N  V  F  S  Y  *  I  *  R  C  I  *  S  L  D  K  I  L  T  N  Y  S   : R  A  K  T  T  G  G  L  F  N  *  Q  C  E  F  V  D  Q  T  D   </first_frame>
            <second_frame>  A  F  L  L  R  I  A  E  S :   L  Q  N  N  W  G  M  M  F  T  A  T  E  D  D  V  D  V  L  M  S  G  Y  A  F  R  L  K  I  S  H  E  R  A  L  G  L  V  T  G  Q   : S  N  N  S  R  H  Q  W  S  L  S  A  D  R  K  L  L  L  Q  H  Q  H  A  S  K  I  N  A  L  R  G  R  Y  P  I  Y  G  P  I  V  R :   L  A  K  R  W  V  S  A  H  L  L  S  T  V  L  T  E  E  A  V  E  L  L  V  S  N  L  F  L  R  P  L  P  F  E  P  P  F  S  R  I  T  G  F  L  R :   F  L  R  L  L  S  E  Y  D  W  A  F  S  P  L  I  V  D  F  D  G  D  F  S  T  E  E  K  N  K  I  N  :  E  N  F  M  R  S  R  E  E  H  E  K  D  T  Q  K  S  S  P  A  M  F  L  A  T  K  Y  D  V  A  S  E  A  W  T  R  S  S  P  T  T  A  :  E  L  R  R  L  V  A  Y  S  T  S  S  A  N  L  L  T  K  L  I  </second_frame>
            <third_frame>   H  F  F  L  E  L  L  R   : V  C  R  T  I  G  G  *  C  L  Q  L  Q  K  M  M  *  M  F  *  C  L  A  M  H  S  A  L  K  F  L  M  K  G  L  L  V  W  *  L  G  K  :  V  I  T  V  D  I  N  G  A  S  L  L  T  E  N  F  F  C  N  T  N  M  R  A  R  S  M  L  *  G  V  V  I  L  Y  M  D  Q  *  F   : G  *  L  K  D  G  S  L  H  I  Y  Y  P  R  C  *  Q  R  R  Q  L  N  Y  W  F  Q  I  F  S  *  D  L  C  H  L  N  L  L  S  P  E  *  Q  D  F  *   : G  S  Y  D  Y  Y  R  N  M  I  G  P  F  L  P  *  S  L  I  L  M  V  T  F  Q  L  R  R  K  I  K  L  M :   R  I  S  *  E  V  E  K  S  M  K  R  T  H  R  N  Q  V  L  Q  C  F  *  L  L  N  M  T  L  H  L  K  L  G  Q  D  P  H  Q  L  Q  Q :   S  *  D  D  W  W  L  I  Q  L  A  V  R  I  C  *  P  N  *  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="133694" stop="133719"/>
                    <exon start="133804" stop="133928"/>
                    <exon start="134066" stop="134186"/>
                    <exon start="134259" stop="134396"/>
                    <exon start="136120" stop="136216"/>
                    <exon start="136330" stop="136455"/>
                    <exon start="137972" stop="138031"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>693</number_coding_nucleotides>
                  <number_encoded_amino_acids>231</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AFLLRIAESLQNNWGMMFTATEDDVDVLMSGYAFRLKISHERALGLVTGQSNNSRHQWSLSADRKLLLQHQHASKINALRGRYPIYGPIVRLAKRWVSAHLLSTVLTEEAVELLVSNLFLRPLPFEPPFSRITGFLRFLRLLSEYDWAFSPLIVDFDGDFSTEEKNKINENFMRSREEHEKDTQKSSPAMFLATKYDVASEAWTRSSPTTAELRRLVAYSTSSANLLTKLI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="25" PGL_strand="+" PGL_start="138204" PGL_stop="139169"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="138204" e_stop="138256"/>
            <exon e_start="138397" e_stop="138539"/>
            <exon e_start="138689" e_stop="138775"/>
            <exon e_start="138849" e_stop="139169"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.900" e_score="0.981"/>
          <exon-intron don_prob="1.000" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.975" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="138204" e_stop="138256" e_length="53"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.900">
            <gDNA_intron_boundary i_start="138257" i_stop="138396" i_length="140"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="138397" e_stop="138539" e_length="143"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.962">
            <gDNA_intron_boundary i_start="138540" i_stop="138688" i_length="149"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="138689" e_stop="138775" e_length="87"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.975">
            <gDNA_intron_boundary i_start="138776" i_stop="138848" i_length="73"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="138849" e_stop="139169" e_length="321"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138204" stop="138256"/>
              <exon start="138397" stop="138539"/>
              <exon start="138689" stop="138775"/>
              <exon start="138849" stop="139169"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603556" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGATAAATTGCCCTACCCCCAGCATCTTCTCTTTCCATCCGAACTTGAACAAG : AGCGATGTGTGGTGCGTGGGCATGCATCCAAGATTTTCCATCCTTTCTTTTCTCCTCGAGACTTCAAAGTGAACTCTGGGGAACTGAAAAGTAAGCTGATGGTGAATTTTGATCCAGTAAGGTGCTTTATTGCCGATATCGAG : AAAGGATTTCCCGATGTGGTCAAGGTTTGGTACGATGCTGTGGGTGGTGATGCTCTTGGTCTTACACTAGGAAAAGCAAGTTCACAG : AAACGGAAGCATGATGACTCCGCGGAGGAGAGCACAGATCTTTTGAATACGCTAAAAACCATAGGCGAGGTTGGGAAAGGCCTTGTGAGAAGTATTCATGTTGTCAAGGCCCGAAAGGCGTGATAATTGAAATGTTCAAAAGAATGTACACTATGGGTATTGTTATCAAGGTTACCGGCCGGTAGGGAGCTCTTCAAATTTTGCAGCACAACTTTTGTACATGTGTAGTCTCTTGTCGAAGAGCCAACAATCACTTGTATTTGTAATTGTATTGAGAAATTCATTTTATAATTCGAGAAAAAGAAGAAAAAAGAGAACTGC</gDNA_template>
            <first_frame> R  *  I  A  L  P  P  A  S  S  L  S  I  R  T  *  T  R :   A  M  C  G  A  W  A  C  I  Q  D  F  P  S  F  L  F  S  S  R  L  Q  S  E  L  W  G  T  E  K  *  A  D  G  E  F  *  S  S  K  V  L  Y  C  R  Y  R   : E  R  I  S  R  C  G  Q  G  L  V  R  C  C  G  W  *  C  S  W  S  Y  T  R  K  S  K  F  T   : E  T  E  A  *  *  L  R  G  G  E  H  R  S  F  E  Y  A  K  N  H  R  R  G  W  E  R  P  C  E  K  Y  S  C  C  Q  G  P  K  G  V  I  I  E  M  F  K  R  M  Y  T  M  G  I  V  I  K  V  T  G  R  *  G  A  L  Q  I  L  Q  H  N  F  C  T  C  V  V  S  C  R  R  A  N  N  H  L  Y  L  *  L  Y  *  E  I  H  F  I  I  R  E  K  E  E  K  R  E  L  </first_frame>
            <second_frame>  D  K  L  P  Y  P  Q  H  L  L  F  P  S  E  L  E  Q   : E  R  C  V  V  R  G  H  A  S  K  I  F  H  P  F  F  S  P  R  D  F  K  V  N  S  G  E  L  K  S  K  L  M  V  N  F  D  P  V  R  C  F  I  A  D  I  E  :  K  G  F  P  D  V  V  K  V  W  Y  D  A  V  G  G  D  A  L  G  L  T  L  G  K  A  S  S  Q  :  K  R  K  H  D  D  S  A  E  E  S  T  D  L  L  N  T  L  K  T  I  G  E  V  G  K  G  L  V  R  S  I  H  V  V  K  A  R  K  A  *  *  L  K  C  S  K  E  C  T  L  W  V  L  L  S  R  L  P  A  G  R  E  L  F  K  F  C  S  T  T  F  V  H  V  *  S  L  V  E  E  P  T  I  T  C  I  C  N  C  I  E  K  F  I  L  *  F  E  K  K  K  K  K  E  N  C </second_frame>
            <third_frame>   I  N  C  P  T  P  S  I  F  S  F  H  P  N  L  N  K  :  S  D  V  W  C  V  G  M  H  P  R  F  S  I  L  S  F  L  L  E  T  S  K  *  T  L  G  N  *  K  V  S  *  W  *  I  L  I  Q  *  G  A  L  L  P  I  S  R :   K  D  F  P  M  W  S  R  F  G  T  M  L  W  V  V  M  L  L  V  L  H  *  E  K  Q  V  H  R :   N  G  S  M  M  T  P  R  R  R  A  Q  I  F  *  I  R  *  K  P  *  A  R  L  G  K  A  L  *  E  V  F  M  L  S  R  P  E  R  R  D  N  *  N  V  Q  K  N  V  H  Y  G  Y  C  Y  Q  G  Y  R  P  V  G  S  S  S  N  F  A  A  Q  L  L  Y  M  C  S  L  L  S  K  S  Q  Q  S  L  V  F  V  I  V  L  R  N  S  F  Y  N  S  R  K  R  R  K  K  R  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="25" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="138205" stop="138256"/>
                    <exon start="138397" stop="138539"/>
                    <exon start="138689" stop="138775"/>
                    <exon start="138849" stop="138971"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>402</number_coding_nucleotides>
                  <number_encoded_amino_acids>134</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DKLPYPQHLLFPSELEQERCVVRGHASKIFHPFFSPRDFKVNSGELKSKLMVNFDPVRCFIADIEKGFPDVVKVWYDAVGGDALGLTLGKASSQKRKHDDSAEESTDLLNTLKTIGEVGKGLVRSIHVVKARKA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="26" PGL_strand="+" PGL_start="140395" PGL_stop="141672"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="140395" e_stop="140925"/>
            <exon e_start="141499" e_stop="141672"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.953" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="140395" e_stop="140925" e_length="531"/>
          </exon>
          <intron i_serial="1" don_prob="0.953" acc_prob="0.999">
            <gDNA_intron_boundary i_start="140926" i_stop="141498" i_length="573"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="141499" e_stop="141672" e_length="174"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="140395" stop="140925"/>
              <exon start="141499" stop="141672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571784" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="26" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCGGGACAAAGCATTAACATGCTAATAATACGCATGTAGATTGTGGAACAGAGAGGTTATTTTGACATGCTACCCAAATCAATCAGGGAAGAAGAAAGATGGTGCACACTGCCTACGATACCTTCCAACTCCTCAATAATTCTCCCTCCAAAATCGATGCCATTGAATCATACCGCTCAAATTTGCTCATCGCATGTTCCGATGGATCGCTCCGTGTTTACGTTCCAGAATCCTCAGTTTCCGATCAATCTGATTTCCATTCCGAAACCTTAGGGCTTCATCAAGGACCATATGTGCTTGAAAGAACTCTGAATGGATTCTCCAGAAGACAAATGCTGGCCATGGAAGTCCTCGTCTCACGAGAACTTCTGCTTTCCCTCTCCGAGTCAATTGCGTTACATCGATTGCCTGATTTGGAGACTTTATCAGTGATTACTAAGGCTAAAGGTGCAAATGTATATTCGTGGGATGATAAACGAGGGTTACTTTGCTTCGGCAGGCAAAAAAGAGTCTGTATTTACAAACACGACG : GGGGGAGTGGATTTGTGGAGGTGAAAGAATTTGGAGTACCTGACACAGTTAAGTCGATGTCATGGTGTGGTGAGAATATTTGCTTGGGGATTAGAAGAGAGTACAAGATATTGAATACCACTAATGGTGTATTGTCTGAGGTGTTCTCTTCAGGGAGGATCGCCGCACCTCTTG</gDNA_template>
            <first_frame> A  G  Q  S  I  N  M  L  I  I  R  M  *  I  V  E  Q  R  G  Y  F  D  M  L  P  K  S  I  R  E  E  E  R  W  C  T  L  P  T  I  P  S  N  S  S  I  I  L  P  P  K  S  M  P  L  N  H  T  A  Q  I  C  S  S  H  V  P  M  D  R  S  V  F  T  F  Q  N  P  Q  F  P  I  N  L  I  S  I  P  K  P  *  G  F  I  K  D  H  M  C  L  K  E  L  *  M  D  S  P  E  D  K  C  W  P  W  K  S  S  S  H  E  N  F  C  F  P  S  P  S  Q  L  R  Y  I  D  C  L  I  W  R  L  Y  Q  *  L  L  R  L  K  V  Q  M  Y  I  R  G  M  I  N  E  G  Y  F  A  S  A  G  K  K  E  S  V  F  T  N  T  T  :  G  G  V  D  L  W  R  *  K  N  L  E  Y  L  T  Q  L  S  R  C  H  G  V  V  R  I  F  A  W  G  L  E  E  S  T  R  Y  *  I  P  L  M  V  Y  C  L  R  C  S  L  Q  G  G  S  P  H  L  L </first_frame>
            <second_frame>  R  D  K  A  L  T  C  *  *  Y  A  C  R  L  W  N  R  E  V  I  L  T  C  Y  P  N  Q  S  G  K  K  K  D  G  A  H  C  L  R  Y  L  P  T  P  Q  *  F  S  L  Q  N  R  C  H  *  I  I  P  L  K  F  A  H  R  M  F  R  W  I  A  P  C  L  R  S  R  I  L  S  F  R  S  I  *  F  P  F  R  N  L  R  A  S  S  R  T  I  C  A  *  K  N  S  E  W  I  L  Q  K  T  N  A  G  H  G  S  P  R  L  T  R  T  S  A  F  P  L  R  V  N  C  V  T  S  I  A  *  F  G  D  F  I  S  D  Y  *  G  *  R  C  K  C  I  F  V  G  *  *  T  R  V  T  L  L  R  Q  A  K  K  S  L  Y  L  Q  T  R  R :   G  E  W  I  C  G  G  E  R  I  W  S  T  *  H  S  *  V  D  V  M  V  W  *  E  Y  L  L  G  D  *  K  R  V  Q  D  I  E  Y  H  *  W  C  I  V  *  G  V  L  F  R  E  D  R  R  T  S   </second_frame>
            <third_frame>   G  T  K  H  *  H  A  N  N  T  H  V  D  C  G  T  E  R  L  F  *  H  A  T  Q  I  N  Q  G  R  R  K  M  V  H  T  A  Y  D  T  F  Q  L  L  N  N  S  P  S  K  I  D  A  I  E  S  Y  R  S  N  L  L  I  A  C  S  D  G  S  L  R  V  Y  V  P  E  S  S  V  S  D  Q  S  D  F  H  S  E  T  L  G  L  H  Q  G  P  Y  V  L  E  R  T  L  N  G  F  S  R  R  Q  M  L  A  M  E  V  L  V  S  R  E  L  L  L  S  L  S  E  S  I  A  L  H  R  L  P  D  L  E  T  L  S  V  I  T  K  A  K  G  A  N  V  Y  S  W  D  D  K  R  G  L  L  C  F  G  R  Q  K  R  V  C  I  Y  K  H  D   : G  G  S  G  F  V  E  V  K  E  F  G  V  P  D  T  V  K  S  M  S  W  C  G  E  N  I  C  L  G  I  R  R  E  Y  K  I  L  N  T  T  N  G  V  L  S  E  V  F  S  S  G  R  I  A  A  P  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="26" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="140460" stop="140925"/>
                    <exon start="141499" stop="141671"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>639</number_coding_nucleotides>
                  <number_encoded_amino_acids>213</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HATQINQGRRKMVHTAYDTFQLLNNSPSKIDAIESYRSNLLIACSDGSLRVYVPESSVSDQSDFHSETLGLHQGPYVLERTLNGFSRRQMLAMEVLVSRELLLSLSESIALHRLPDLETLSVITKAKGANVYSWDDKRGLLCFGRQKRVCIYKHDGGSGFVEVKEFGVPDTVKSMSWCGENICLGIRREYKILNTTNGVLSEVFSSGRIAAPL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="27" PGL_strand="+" PGL_start="143568" PGL_stop="144297"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="143568" e_stop="144297"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.978"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.978">
            <gDNA_exon_boundary e_start="143568" e_stop="144297" e_length="730"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="143568" stop="144297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580079" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATGGATGTCCCAAGCTCAAACCACTGGGCCACCCCGAAGTTATAATATATCCATAGAATCTATATCCTCAAAGTTTTCTTCATTGTATATAAAAGAGCAAATGTAGCACATTGTCCAAATTCTTATGCTGCCTCATCTCTTTGAATATTATGTGGTTTGACTAGGAGTGCAAACTAAGAAATTTGTTTGAATTGTATATCACATTCATGTGGTGAAAAAGATCAAGTTAAATATTGGAGTTCATGTGAACGGCTGGTTTGATTGGAAAATATAAGACTGCAATATAGTTTAGACTCGAAAGTTTAATTTGGGAAGTCATCCAAAGTGAACTGTGTAATATACGTCAGATGGGGGTGTATTCTAGTACCAGTGTATTTTGTCTTTATGATTTACCGTAACTGAAGTGCCCTCAGTCAATAAATATCGGTGTTTAGCTGAGGTGATGGATATTGGAGATTGAAGAATGTTAGTGATCAAAACAGTATGTTGAACCTTGTACTTTAAGGTTTGGAATGTAGACTCTTGGATTACTATTATGGATCCTAGGCCCATCTACTGTTCAACTCAAGTACCACCATCTTTAGCCTTCAACTTGTAGAACTCACTACGATTCCAGGTGGCCCCATAGAGCCGAGTTCTGATGCCTAAGTGAGTGTTGACCAAAAACTTCTAGGTGTTGACCAAGGTAGAAGAAAGATTGACACAACCTTAGCACCAAAAGCTAGCTATT</gDNA_template>
            <first_frame> M  D  V  P  S  S  N  H  W  A  T  P  K  L  *  Y  I  H  R  I  Y  I  L  K  V  F  F  I  V  Y  K  R  A  N  V  A  H  C  P  N  S  Y  A  A  S  S  L  *  I  L  C  G  L  T  R  S  A  N  *  E  I  C  L  N  C  I  S  H  S  C  G  E  K  D  Q  V  K  Y  W  S  S  C  E  R  L  V  *  L  E  N  I  R  L  Q  Y  S  L  D  S  K  V  *  F  G  K  S  S  K  V  N  C  V  I  Y  V  R  W  G  C  I  L  V  P  V  Y  F  V  F  M  I  Y  R  N  *  S  A  L  S  Q  *  I  S  V  F  S  *  G  D  G  Y  W  R  L  K  N  V  S  D  Q  N  S  M  L  N  L  V  L  *  G  L  E  C  R  L  L  D  Y  Y  Y  G  S  *  A  H  L  L  F  N  S  S  T  T  I  F  S  L  Q  L  V  E  L  T  T  I  P  G  G  P  I  E  P  S  S  D  A  *  V  S  V  D  Q  K  L  L  G  V  D  Q  G  R  R  K  I  D  T  T  L  A  P  K  A  S  Y  </first_frame>
            <second_frame>  W  M  S  Q  A  Q  T  T  G  P  P  R  S  Y  N  I  S  I  E  S  I  S  S  K  F  S  S  L  Y  I  K  E  Q  M  *  H  I  V  Q  I  L  M  L  P  H  L  F  E  Y  Y  V  V  *  L  G  V  Q  T  K  K  F  V  *  I  V  Y  H  I  H  V  V  K  K  I  K  L  N  I  G  V  H  V  N  G  W  F  D  W  K  I  *  D  C  N  I  V  *  T  R  K  F  N  L  G  S  H  P  K  *  T  V  *  Y  T  S  D  G  G  V  F  *  Y  Q  C  I  L  S  L  *  F  T  V  T  E  V  P  S  V  N  K  Y  R  C  L  A  E  V  M  D  I  G  D  *  R  M  L  V  I  K  T  V  C  *  T  L  Y  F  K  V  W  N  V  D  S  W  I  T  I  M  D  P  R  P  I  Y  C  S  T  Q  V  P  P  S  L  A  F  N  L  *  N  S  L  R  F  Q  V  A  P  *  S  R  V  L  M  P  K  *  V  L  T  K  N  F  *  V  L  T  K  V  E  E  R  L  T  Q  P  *  H  Q  K  L  A  I </second_frame>
            <third_frame>   G  C  P  K  L  K  P  L  G  H  P  E  V  I  I  Y  P  *  N  L  Y  P  Q  S  F  L  H  C  I  *  K  S  K  C  S  T  L  S  K  F  L  C  C  L  I  S  L  N  I  M  W  F  D  *  E  C  K  L  R  N  L  F  E  L  Y  I  T  F  M  W  *  K  R  S  S  *  I  L  E  F  M  *  T  A  G  L  I  G  K  Y  K  T  A  I  *  F  R  L  E  S  L  I  W  E  V  I  Q  S  E  L  C  N  I  R  Q  M  G  V  Y  S  S  T  S  V  F  C  L  Y  D  L  P  *  L  K  C  P  Q  S  I  N  I  G  V  *  L  R  *  W  I  L  E  I  E  E  C  *  *  S  K  Q  Y  V  E  P  C  T  L  R  F  G  M  *  T  L  G  L  L  L  W  I  L  G  P  S  T  V  Q  L  K  Y  H  H  L  *  P  S  T  C  R  T  H  Y  D  S  R  W  P  H  R  A  E  F  *  C  L  S  E  C  *  P  K  T  S  R  C  *  P  R  *  K  K  D  *  H  N  L  S  T  K  S  *  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0215M12.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="28" PGL_strand="+" PGL_start="144935" PGL_stop="147503"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="144935" e_stop="145047"/>
            <exon e_start="146354" e_stop="146780"/>
            <exon e_start="147317" e_stop="147503"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.618" acc_prob="0.996" e_score="0.956"/>
          <exon-intron don_prob="0.992" acc_prob="0.995" e_score="0.909"/>
          <exon-only e_score="0.909"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.956">
            <gDNA_exon_boundary e_start="144935" e_stop="145047" e_length="113"/>
          </exon>
          <intron i_serial="1" don_prob="0.618" acc_prob="0.996">
            <gDNA_intron_boundary i_start="145048" i_stop="146353" i_length="1306"/>
          </intron>
          <exon e_serial="2" e_score="0.909">
            <gDNA_exon_boundary e_start="146354" e_stop="146780" e_length="427"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.995">
            <gDNA_intron_boundary i_start="146781" i_stop="147316" i_length="536"/>
          </intron>
          <exon e_serial="3" e_score="0.909">
            <gDNA_exon_boundary e_start="147317" e_stop="147503" e_length="187"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="144935" stop="145047"/>
              <exon start="146354" stop="146780"/>
              <exon start="147317" stop="147503"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599354" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="28" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTGTACAACTAACAGCATCTGGAAACTTTGAGGAGGCCTTGGCTTTGTGCAAATTGCTACCACCAGAAGATTCCAGTCTTAGATCTTCAAAGGAGCAGTCAATTCATATGAG : ATATGCGCACTTTCTATTTGAAAATGGGAGCTATGAAGAAGCAATGGAACATTTTCTGGCATCTCAAGTTGAAATCACTTATGTGCTCGCCTTATATCCATCCATTATTGTTCCAAAATCATCTTGCATACCTGAACCACAGAAATTTGCAGATGTTGCAGATGCACCATATCTCTCCCGAGGCTCTTCTGGTCTGTCAGATGATCTAGATTCTCCGTCTTCGGATGTATTTGAATCTGATGAAATGGATATAGAGTCCAAGAAAATGAGCCACAACACTTTGATGGCTCTGATTAAGTATTTGCAGAAAAAGAGATACAGTGTCATTGAGAAAGCAACAACTGAGGGAACTGAAGAAGTGGTTTCAGATGCTGTTGGAGATAATTTCATTTCTTATGGAACTGACCGGTCCAAAAAACCAACCAAG : GGCAGAATTCATATTCCTATCACTTCCATCGCTAGGGACATGGCTGCAATACTGGACACTGCACTTCTTCAAGCTCTGTTTTTAACTGGACAGTCCTCTGCTGCTACAAATTTTCTGAAAGTCCTCAACTACTGTGATGTGAAAATATGCGATGCGTTCCTGCAAGAGAGAAGCCAGTATGCTTGTC</gDNA_template>
            <first_frame> I  V  Q  L  T  A  S  G  N  F  E  E  A  L  A  L  C  K  L  L  P  P  E  D  S  S  L  R  S  S  K  E  Q  S  I  H  M  R :   Y  A  H  F  L  F  E  N  G  S  Y  E  E  A  M  E  H  F  L  A  S  Q  V  E  I  T  Y  V  L  A  L  Y  P  S  I  I  V  P  K  S  S  C  I  P  E  P  Q  K  F  A  D  V  A  D  A  P  Y  L  S  R  G  S  S  G  L  S  D  D  L  D  S  P  S  S  D  V  F  E  S  D  E  M  D  I  E  S  K  K  M  S  H  N  T  L  M  A  L  I  K  Y  L  Q  K  K  R  Y  S  V  I  E  K  A  T  T  E  G  T  E  E  V  V  S  D  A  V  G  D  N  F  I  S  Y  G  T  D  R  S  K  K  P  T  K  :  G  R  I  H  I  P  I  T  S  I  A  R  D  M  A  A  I  L  D  T  A  L  L  Q  A  L  F  L  T  G  Q  S  S  A  A  T  N  F  L  K  V  L  N  Y  C  D  V  K  I  C  D  A  F  L  Q  E  R  S  Q  Y  A  C  </first_frame>
            <second_frame>  L  Y  N  *  Q  H  L  E  T  L  R  R  P  W  L  C  A  N  C  Y  H  Q  K  I  P  V  L  D  L  Q  R  S  S  Q  F  I  *   : D  M  R  T  F  Y  L  K  M  G  A  M  K  K  Q  W  N  I  F  W  H  L  K  L  K  S  L  M  C  S  P  Y  I  H  P  L  L  F  Q  N  H  L  A  Y  L  N  H  R  N  L  Q  M  L  Q  M  H  H  I  S  P  E  A  L  L  V  C  Q  M  I  *  I  L  R  L  R  M  Y  L  N  L  M  K  W  I  *  S  P  R  K  *  A  T  T  L  *  W  L  *  L  S  I  C  R  K  R  D  T  V  S  L  R  K  Q  Q  L  R  E  L  K  K  W  F  Q  M  L  L  E  I  I  S  F  L  M  E  L  T  G  P  K  N  Q  P  R :   A  E  F  I  F  L  S  L  P  S  L  G  T  W  L  Q  Y  W  T  L  H  F  F  K  L  C  F  *  L  D  S  P  L  L  L  Q  I  F  *  K  S  S  T  T  V  M  *  K  Y  A  M  R  S  C  K  R  E  A  S  M  L  V </second_frame>
            <third_frame>   C  T  T  N  S  I  W  K  L  *  G  G  L  G  F  V  Q  I  A  T  T  R  R  F  Q  S  *  I  F  K  G  A  V  N  S  Y  E  :  I  C  A  L  S  I  *  K  W  E  L  *  R  S  N  G  T  F  S  G  I  S  S  *  N  H  L  C  A  R  L  I  S  I  H  Y  C  S  K  I  I  L  H  T  *  T  T  E  I  C  R  C  C  R  C  T  I  S  L  P  R  L  F  W  S  V  R  *  S  R  F  S  V  F  G  C  I  *  I  *  *  N  G  Y  R  V  Q  E  N  E  P  Q  H  F  D  G  S  D  *  V  F  A  E  K  E  I  Q  C  H  *  E  S  N  N  *  G  N  *  R  S  G  F  R  C  C  W  R  *  F  H  F  L  W  N  *  P  V  Q  K  T  N  Q   : G  Q  N  S  Y  S  Y  H  F  H  R  *  G  H  G  C  N  T  G  H  C  T  S  S  S  S  V  F  N  W  T  V  L  C  C  Y  K  F  S  E  S  P  Q  L  L  *  C  E  N  M  R  C  V  P  A  R  E  K  P  V  C  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="28" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="144935" stop="145047"/>
                    <exon start="146354" stop="146780"/>
                    <exon start="147317" stop="147502"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>726</number_coding_nucleotides>
                  <number_encoded_amino_acids>242</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IVQLTASGNFEEALALCKLLPPEDSSLRSSKEQSIHMRYAHFLFENGSYEEAMEHFLASQVEITYVLALYPSIIVPKSSCIPEPQKFADVADAPYLSRGSSGLSDDLDSPSSDVFESDEMDIESKKMSHNTLMALIKYLQKKRYSVIEKATTEGTEEVVSDAVGDNFISYGTDRSKKPTKGRIHIPITSIARDMAAILDTALLQALFLTGQSSAATNFLKVLNYCDVKICDAFLQERSQYAC</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="29" PGL_strand="+" PGL_start="147865" PGL_stop="149734"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="147865" e_stop="148180"/>
            <exon e_start="148639" e_stop="148881"/>
            <exon e_start="149377" e_stop="149734"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.076" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.992" e_score="0.988"/>
          <exon-only e_score="0.950"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="147865" e_stop="148180" e_length="316"/>
          </exon>
          <intron i_serial="1" don_prob="0.076" acc_prob="0.967">
            <gDNA_intron_boundary i_start="148181" i_stop="148638" i_length="458"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="148639" e_stop="148881" e_length="243"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.992">
            <gDNA_intron_boundary i_start="148882" i_stop="149376" i_length="495"/>
          </intron>
          <exon e_serial="3" e_score="0.950">
            <gDNA_exon_boundary e_start="149377" e_stop="149734" e_length="358"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="147865" stop="148180"/>
              <exon start="148639" stop="148881"/>
              <exon start="149377" stop="149734"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574826" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="29" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATGCTTAGCACAGGGAATGAATCTCTCTTTAAGTATTTTATGGAACAATGCTTCGCCAAAACAGTTATCTGATTATTTTTTCTTTTTTGGGCAGCCCCTTTGTGCAACTGACCCCATGCTTGTCCTGGAGTTCTCATTGCCTGTTCTTGAAAGCTGTCCGATGCAAACCATTGAGCTATTTTTGTCTGGTAACATTCCAGCAGACTTGGTGAATTCTTACTTAAAGCAGCATGCTCCAGACATGCAGGCAACATATCTAGAACTCATGCTTGCCATGAATGAAAATAGTATCTCAGGGAATCTGCAGAATGAAATG : GTGCAAATTTATCTCTCAGAAGTGCTTGATTTTCATGCTGAACATAATTCACAGCAAAAGTGGGATGAGAAAACATGTCCTCCACCAAGGAAAAAGCTACTGTCTGCTTTGGAGGGTATGTCTGGATATACTCCAGAGGTGTTGCTGAAGAGACTTCCACCAGATGCTCTGTATGAAGAACGTGCAATTCTTTTGGGGAAAATGAATAAACATGAACTTGCCCTGTCTATTTATGTGCACAAG : CTTCATGCTCCCGAACTTGCACTGTCCTATTGTGACCGGGTGTACGATTCAGGACTTCAACAACATTCAGCAAAATCTTACGGAAACATTTACCTGACTCTACTGCAAATCTATCTAAATCCTAGGAAGACAACAAAAAAATTTGAGAAGAAAATTACTAATCTGGTATCAGCTCAGAGCCCTAGGATTCCAAAAGTTGGTTTAGGAACTACAGGAAAGGTAAAAGGAGGCCGCTCCAAGAAAATTGCTGAAATTGGGGGCGCTGAGGACACTCGATTCAGTCTAAGCGGCACAGACAGTGGTAGGAGTGATGGAGATACAGAAGATGCTGCCGAGGAAGGTGGTTCTACTATTATGC</gDNA_template>
            <first_frame> M  L  S  T  G  N  E  S  L  F  K  Y  F  M  E  Q  C  F  A  K  T  V  I  *  L  F  F  L  F  W  A  A  P  L  C  N  *  P  H  A  C  P  G  V  L  I  A  C  S  *  K  L  S  D  A  N  H  *  A  I  F  V  W  *  H  S  S  R  L  G  E  F  L  L  K  A  A  C  S  R  H  A  G  N  I  S  R  T  H  A  C  H  E  *  K  *  Y  L  R  E  S  A  E  *  N   : G  A  N  L  S  L  R  S  A  *  F  S  C  *  T  *  F  T  A  K  V  G  *  E  N  M  S  S  T  K  E  K  A  T  V  C  F  G  G  Y  V  W  I  Y  S  R  G  V  A  E  E  T  S  T  R  C  S  V  *  R  T  C  N  S  F  G  E  N  E  *  T  *  T  C  P  V  Y  L  C  A  Q   : A  S  C  S  R  T  C  T  V  L  L  *  P  G  V  R  F  R  T  S  T  T  F  S  K  I  L  R  K  H  L  P  D  S  T  A  N  L  S  K  S  *  E  D  N  K  K  I  *  E  E  N  Y  *  S  G  I  S  S  E  P  *  D  S  K  S  W  F  R  N  Y  R  K  G  K  R  R  P  L  Q  E  N  C  *  N  W  G  R  *  G  H  S  I  Q  S  K  R  H  R  Q  W  *  E  *  W  R  Y  R  R  C  C  R  G  R  W  F  Y  Y  Y   </first_frame>
            <second_frame>  C  L  A  Q  G  M  N  L  S  L  S  I  L  W  N  N  A  S  P  K  Q  L  S  D  Y  F  F  F  F  G  Q  P  L  C  A  T  D  P  M  L  V  L  E  F  S  L  P  V  L  E  S  C  P  M  Q  T  I  E  L  F  L  S  G  N  I  P  A  D  L  V  N  S  Y  L  K  Q  H  A  P  D  M  Q  A  T  Y  L  E  L  M  L  A  M  N  E  N  S  I  S  G  N  L  Q  N  E  M  :  V  Q  I  Y  L  S  E  V  L  D  F  H  A  E  H  N  S  Q  Q  K  W  D  E  K  T  C  P  P  P  R  K  K  L  L  S  A  L  E  G  M  S  G  Y  T  P  E  V  L  L  K  R  L  P  P  D  A  L  Y  E  E  R  A  I  L  L  G  K  M  N  K  H  E  L  A  L  S  I  Y  V  H  K  :  L  H  A  P  E  L  A  L  S  Y  C  D  R  V  Y  D  S  G  L  Q  Q  H  S  A  K  S  Y  G  N  I  Y  L  T  L  L  Q  I  Y  L  N  P  R  K  T  T  K  K  F  E  K  K  I  T  N  L  V  S  A  Q  S  P  R  I  P  K  V  G  L  G  T  T  G  K  V  K  G  G  R  S  K  K  I  A  E  I  G  G  A  E  D  T  R  F  S  L  S  G  T  D  S  G  R  S  D  G  D  T  E  D  A  A  E  E  G  G  S  T  I  M  </second_frame>
            <third_frame>   A  *  H  R  E  *  I  S  L  *  V  F  Y  G  T  M  L  R  Q  N  S  Y  L  I  I  F  S  F  L  G  S  P  F  V  Q  L  T  P  C  L  S  W  S  S  H  C  L  F  L  K  A  V  R  C  K  P  L  S  Y  F  C  L  V  T  F  Q  Q  T  W  *  I  L  T  *  S  S  M  L  Q  T  C  R  Q  H  I  *  N  S  C  L  P  *  M  K  I  V  S  Q  G  I  C  R  M  K  W :   C  K  F  I  S  Q  K  C  L  I  F  M  L  N  I  I  H  S  K  S  G  M  R  K  H  V  L  H  Q  G  K  S  Y  C  L  L  W  R  V  C  L  D  I  L  Q  R  C  C  *  R  D  F  H  Q  M  L  C  M  K  N  V  Q  F  F  W  G  K  *  I  N  M  N  L  P  C  L  F  M  C  T  S :   F  M  L  P  N  L  H  C  P  I  V  T  G  C  T  I  Q  D  F  N  N  I  Q  Q  N  L  T  E  T  F  T  *  L  Y  C  K  S  I  *  I  L  G  R  Q  Q  K  N  L  R  R  K  L  L  I  W  Y  Q  L  R  A  L  G  F  Q  K  L  V  *  E  L  Q  E  R  *  K  E  A  A  P  R  K  L  L  K  L  G  A  L  R  T  L  D  S  V  *  A  A  Q  T  V  V  G  V  M  E  I  Q  K  M  L  P  R  K  V  V  L  L  L  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="29" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="147866" stop="148180"/>
                    <exon start="148639" stop="148881"/>
                    <exon start="149377" stop="149733"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>915</number_coding_nucleotides>
                  <number_encoded_amino_acids>305</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CLAQGMNLSLSILWNNASPKQLSDYFFFFGQPLCATDPMLVLEFSLPVLESCPMQTIELFLSGNIPADLVNSYLKQHAPDMQATYLELMLAMNENSISGNLQNEMVQIYLSEVLDFHAEHNSQQKWDEKTCPPPRKKLLSALEGMSGYTPEVLLKRLPPDALYEERAILLGKMNKHELALSIYVHKLHAPELALSYCDRVYDSGLQQHSAKSYGNIYLTLLQIYLNPRKTTKKFEKKITNLVSAQSPRIPKVGLGTTGKVKGGRSKKIAEIGGAEDTRFSLSGTDSGRSDGDTEDAAEEGGSTIM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="147879" e_stop="148744"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="147879" e_stop="148744" e_length="866"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="147879" stop="148744"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574825" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="29" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATGAATCTCTCTTTAAGTATTTTATGGAACAATGCTTCGCCAAAACAGTTATCTGATTATTTTTTCTTTTTTGGGCAGCCCCTTTGTGCAACTGACCCCATGCTTGTCCTGGAGTTCTCATTGCCTGTTCTTGAAAGCTGTCCGATGCAAACCATTGAGCTATTTTTGTCTGGTAACATTCCAGCAGACTTGGTGAATTCTTACTTAAAGCAGCATGCTCCAGACATGCAGGCAACATATCTAGAACTCATGCTTGCCATGAATGAAAATAGTATCTCAGGGAATCTGCAGAATGAAATGGTAGAGGCACTTGTCCATCTGTCTGGTTTTATGTAGCTTCTCTCTGTCTTTCCCCTTTTGTACCTTTTATTTCATAAAAACCATTAAAGCAACATTGCTTCAAGTGAAGCCAGAAAGCTGAGGCTTATAGTTCTCCTCGTGATATGGGCATATGTCTAATGAAGCTCACATGTTTAGGCTTCTTTGAACTCAAATCTTTGAGAAACCCTGAGTGACAAAATTTAGGAACAATTATCTTGCCTCCTACTGTTTCTCAGGGATAAAGATTTTGCTCGGACTCTTCAAAATGGGTGCGTGTTGGATCCTCCAAAAGTAGTGTATTTTTGGAGGATCGAACACAGTTGGAGTAACATTTTTGGAGAGTCCGCTCAACAGTCTTTTGTGCTTCAATCCATGCGTCTGACAAAATGTTGAGTGTTTATGTGATTATGATAAATTCGCTTAGCAACTTGTGGCAGGTGCAAATTTATCTCTCAGAAGTGCTTGATTTTCATGCTGAACATAATTCACAGCAAAAGTGGGATGAGAAAACATGTCCTCCACCAAGGAAAAAGCTACTGTCTG</gDNA_template>
            <first_frame> E  *  I  S  L  *  V  F  Y  G  T  M  L  R  Q  N  S  Y  L  I  I  F  S  F  L  G  S  P  F  V  Q  L  T  P  C  L  S  W  S  S  H  C  L  F  L  K  A  V  R  C  K  P  L  S  Y  F  C  L  V  T  F  Q  Q  T  W  *  I  L  T  *  S  S  M  L  Q  T  C  R  Q  H  I  *  N  S  C  L  P  *  M  K  I  V  S  Q  G  I  C  R  M  K  W  *  R  H  L  S  I  C  L  V  L  C  S  F  S  L  S  F  P  F  C  T  F  Y  F  I  K  T  I  K  A  T  L  L  Q  V  K  P  E  S  *  G  L  *  F  S  S  *  Y  G  H  M  S  N  E  A  H  M  F  R  L  L  *  T  Q  I  F  E  K  P  *  V  T  K  F  R  N  N  Y  L  A  S  Y  C  F  S  G  I  K  I  L  L  G  L  F  K  M  G  A  C  W  I  L  Q  K  *  C  I  F  G  G  S  N  T  V  G  V  T  F  L  E  S  P  L  N  S  L  L  C  F  N  P  C  V  *  Q  N  V  E  C  L  C  D  Y  D  K  F  A  *  Q  L  V  A  G  A  N  L  S  L  R  S  A  *  F  S  C  *  T  *  F  T  A  K  V  G  *  E  N  M  S  S  T  K  E  K  A  T  V   </first_frame>
            <second_frame>  N  E  S  L  F  K  Y  F  M  E  Q  C  F  A  K  T  V  I  *  L  F  F  L  F  W  A  A  P  L  C  N  *  P  H  A  C  P  G  V  L  I  A  C  S  *  K  L  S  D  A  N  H  *  A  I  F  V  W  *  H  S  S  R  L  G  E  F  L  L  K  A  A  C  S  R  H  A  G  N  I  S  R  T  H  A  C  H  E  *  K  *  Y  L  R  E  S  A  E  *  N  G  R  G  T  C  P  S  V  W  F  Y  V  A  S  L  C  L  S  P  F  V  P  F  I  S  *  K  P  L  K  Q  H  C  F  K  *  S  Q  K  A  E  A  Y  S  S  P  R  D  M  G  I  C  L  M  K  L  T  C  L  G  F  F  E  L  K  S  L  R  N  P  E  *  Q  N  L  G  T  I  I  L  P  P  T  V  S  Q  G  *  R  F  C  S  D  S  S  K  W  V  R  V  G  S  S  K  S  S  V  F  L  E  D  R  T  Q  L  E  *  H  F  W  R  V  R  S  T  V  F  C  A  S  I  H  A  S  D  K  M  L  S  V  Y  V  I  M  I  N  S  L  S  N  L  W  Q  V  Q  I  Y  L  S  E  V  L  D  F  H  A  E  H  N  S  Q  Q  K  W  D  E  K  T  C  P  P  P  R  K  K  L  L  S  </second_frame>
            <third_frame>   M  N  L  S  L  S  I  L  W  N  N  A  S  P  K  Q  L  S  D  Y  F  F  F  F  G  Q  P  L  C  A  T  D  P  M  L  V  L  E  F  S  L  P  V  L  E  S  C  P  M  Q  T  I  E  L  F  L  S  G  N  I  P  A  D  L  V  N  S  Y  L  K  Q  H  A  P  D  M  Q  A  T  Y  L  E  L  M  L  A  M  N  E  N  S  I  S  G  N  L  Q  N  E  M  V  E  A  L  V  H  L  S  G  F  M  *  L  L  S  V  F  P  L  L  Y  L  L  F  H  K  N  H  *  S  N  I  A  S  S  E  A  R  K  L  R  L  I  V  L  L  V  I  W  A  Y  V  *  *  S  S  H  V  *  A  S  L  N  S  N  L  *  E  T  L  S  D  K  I  *  E  Q  L  S  C  L  L  L  F  L  R  D  K  D  F  A  R  T  L  Q  N  G  C  V  L  D  P  P  K  V  V  Y  F  W  R  I  E  H  S  W  S  N  I  F  G  E  S  A  Q  Q  S  F  V  L  Q  S  M  R  L  T  K  C  *  V  F  M  *  L  *  *  I  R  L  A  T  C  G  R  C  K  F  I  S  Q  K  C  L  I  F  M  L  N  I  I  H  S  K  S  G  M  R  K  H  V  L  H  Q  G  K  S  Y  C  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="29" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="147881" stop="148216"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>333</number_coding_nucleotides>
                  <number_encoded_amino_acids>111</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MNLSLSILWNNASPKQLSDYFFFFGQPLCATDPMLVLEFSLPVLESCPMQTIELFLSGNIPADLVNSYLKQHAPDMQATYLELMLAMNENSISGNLQNEMVEALVHLSGFM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="+"/>
                <serials PGL_serial="29" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="148531" stop="148743"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HFWRVRSTVFCASIHASDKMLSVYVIMINSLSNLWQVQIYLSEVLDFHAEHNSQQKWDEKTCPPPRKKLLS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="30" PGL_strand="-" PGL_start="153068" PGL_stop="151428"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="153068" e_stop="151428"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="153068" e_stop="151428" e_length="1641"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="153068" stop="152227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="152813" stop="152043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591505" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="152054" stop="151868"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574014" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="151903" stop="151428"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588804" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="30" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTGATTGATAATTATTTAAACAAAAAAATCAATCCTTTTGGTTTTAAATTCGTTATTACCATCTGGCGTCCTTCAAATTCTTTGGCAACTTGACCATTTTATATTCTATATTTATGGTAATACTACTTTACCATTTATATTACCAAAAAAAAATAAAAAATAAAAATTTGTTGTTAGGGCAAGACTCCGCAGACTGGGTCGGATAAACCCCTCAAGAACCCCGGAATCGCCGCCGCCTGTCACATGACTTCTCCAATTGTCGAAATCAAAGGAGACATTGACACGGACGACCTCAATCCGTTCACTATGATTCTCCCACAAGATGGCCATGACAATGACGCCTCTCCGCAGCAGCAAAAACAGCAACTCCATTTCCTCCAATCCATTAACTCAAACGTAGTCATCAGACAACTTCCATCTGAAGGCCTTTCTTTCCAACTCTGGCCTGCCGCTACTATTCTCGTCACTCTCCTTGATAACACTCGTAACGGCGAATCAACTCCGTTTTCCGATTTGTTCAAACGTCAGGAAAAAGGGGTTTCGCTACCCCTTCGTATTCTCGAACTGGGTTCAGGAACAGGTGTTGTTGGGATAGCTGCTGCTGCTATTCTTGGTGCTAAGGTTACTGTCACTGACCTTCCTCATGTGCTGCCTAATATACAGTTCAATGTTGATGCAAACTCACAAGTTTTGGAACAACAGAGTGGGGGTGTTGATGTTGCGGCGCTTAGCTGGGGGGATAACCAGCATATGGAGGCTGTTGGTAGAGATTATGACCTGATTTTGGGATCTGATGTGGTGTACCATGATCACCTCTATGATCCTCTGATTAACACGTTGAGGTTCTTCCTGTTAGGAGGTGGAAAGAAGATAGCTTTTGTTATGGCTCATTTGAGAAGATGGAAGAAGGAATCTGCTTTCTTCAAGAGAGCCAAGAAGCTTTTTGATGTCCAAATCATACATACCGAGCCTCCGCCCGATGGGTCTAGGATTGGGGTGGTTGTATACCTTTTCACCGGGAAAAGATAGCCACTATAGTCAATCAAGGCTAGATGTTGGTGGGATGTCAGTCTGAATCTTATTGTCATGTCATGTATAACAATGGGGATGGGGTTAGCCCAACAAAGAAGTAAAAAACTACTGTATTTGCTTTACGTGGAAATACAATCAACAAAGAAAGTTGTGTATTATTGCATTTTAATTGAACATTCACAACCTTGAGTTGTAACAAAACTCTACTCAAAATTAAGTTATAAACACCTCAAGTTAAGAGCTCTCATCCATTTTAATACAGAAAAAATACACAACATCAAATCAATTGTATTCGCTTCTACATTGGCCATAATCTGCAAAAAAAATGTGTATAACTTGTTACTTCTTGAGGAGCACTGTCATTCTAGGCTTGCACACTTGTACCATTTGCAACCCATTGCAGCCCTTGTGACTTGAGAGCAGAAGTGTCTTACTTTCAGGATAAATGGCAACTTAAAACTGAGCTGCAGAACATGTTAAATGGTGCTAGCATGAAGAAATGGGATCAATGCCACCAATAGCAACCCAAAACATTCAGTTAATCCCAAATCCAACTTCTCATTATCATCTTTTCCTCAACTGAGAGCCTCTTCCAACTGCCTTCATA</gDNA_template>
            <first_frame> N  *  L  I  I  I  *  T  K  K  S  I  L  L  V  L  N  S  L  L  P  S  G  V  L  Q  I  L  W  Q  L  D  H  F  I  F  Y  I  Y  G  N  T  T  L  P  F  I  L  P  K  K  N  K  K  *  K  F  V  V  R  A  R  L  R  R  L  G  R  I  N  P  S  R  T  P  E  S  P  P  P  V  T  *  L  L  Q  L  S  K  S  K  E  T  L  T  R  T  T  S  I  R  S  L  *  F  S  H  K  M  A  M  T  M  T  P  L  R  S  S  K  N  S  N  S  I  S  S  N  P  L  T  Q  T  *  S  S  D  N  F  H  L  K  A  F  L  S  N  S  G  L  P  L  L  F  S  S  L  S  L  I  T  L  V  T  A  N  Q  L  R  F  P  I  C  S  N  V  R  K  K  G  F  R  Y  P  F  V  F  S  N  W  V  Q  E  Q  V  L  L  G  *  L  L  L  L  F  L  V  L  R  L  L  S  L  T  F  L  M  C  C  L  I  Y  S  S  M  L  M  Q  T  H  K  F  W  N  N  R  V  G  V  L  M  L  R  R  L  A  G  G  I  T  S  I  W  R  L  L  V  E  I  M  T  *  F  W  D  L  M  W  C  T  M  I  T  S  M  I  L  *  L  T  R  *  G  S  S  C  *  E  V  E  R  R  *  L  L  L  W  L  I  *  E  D  G  R  R  N  L  L  S  S  R  E  P  R  S  F  L  M  S  K  S  Y  I  P  S  L  R  P  M  G  L  G  L  G  W  L  Y  T  F  S  P  G  K  D  S  H  Y  S  Q  S  R  L  D  V  G  G  M  S  V  *  I  L  L  S  C  H  V  *  Q  W  G  W  G  *  P  N  K  E  V  K  N  Y  C  I  C  F  T  W  K  Y  N  Q  Q  R  K  L  C  I  I  A  F  *  L  N  I  H  N  L  E  L  *  Q  N  S  T  Q  N  *  V  I  N  T  S  S  *  E  L  S  S  I  L  I  Q  K  K  Y  T  T  S  N  Q  L  Y  S  L  L  H  W  P  *  S  A  K  K  M  C  I  T  C  Y  F  L  R  S  T  V  I  L  G  L  H  T  C  T  I  C  N  P  L  Q  P  L  *  L  E  S  R  S  V  L  L  S  G  *  M  A  T  *  N  *  A  A  E  H  V  K  W  C  *  H  E  E  M  G  S  M  P  P  I  A  T  Q  N  I  Q  L  I  P  N  P  T  S  H  Y  H  L  F  L  N  *  E  P  L  P  T  A  F  I </first_frame>
            <second_frame>  I  D  *  *  L  F  K  Q  K  N  Q  S  F  W  F  *  I  R  Y  Y  H  L  A  S  F  K  F  F  G  N  L  T  I  L  Y  S  I  F  M  V  I  L  L  Y  H  L  Y  Y  Q  K  K  I  K  N  K  N  L  L  L  G  Q  D  S  A  D  W  V  G  *  T  P  Q  E  P  R  N  R  R  R  L  S  H  D  F  S  N  C  R  N  Q  R  R  H  *  H  G  R  P  Q  S  V  H  Y  D  S  P  T  R  W  P  *  Q  *  R  L  S  A  A  A  K  T  A  T  P  F  P  P  I  H  *  L  K  R  S  H  Q  T  T  S  I  *  R  P  F  F  P  T  L  A  C  R  Y  Y  S  R  H  S  P  *  *  H  S  *  R  R  I  N  S  V  F  R  F  V  Q  T  S  G  K  R  G  F  A  T  P  S  Y  S  R  T  G  F  R  N  R  C  C  W  D  S  C  C  C  Y  S  W  C  *  G  Y  C  H  *  P  S  S  C  A  A  *  Y  T  V  Q  C  *  C  K  L  T  S  F  G  T  T  E  W  G  C  *  C  C  G  A  *  L  G  G  *  P  A  Y  G  G  C  W  *  R  L  *  P  D  F  G  I  *  C  G  V  P  *  S  P  L  *  S  S  D  *  H  V  E  V  L  P  V  R  R  W  K  E  D  S  F  C  Y  G  S  F  E  K  M  E  E  G  I  C  F  L  Q  E  S  Q  E  A  F  *  C  P  N  H  T  Y  R  A  S  A  R  W  V  *  D  W  G  G  C  I  P  F  H  R  E  K  I  A  T  I  V  N  Q  G  *  M  L  V  G  C  Q  S  E  S  Y  C  H  V  M  Y  N  N  G  D  G  V  S  P  T  K  K  *  K  T  T  V  F  A  L  R  G  N  T  I  N  K  E  S  C  V  L  L  H  F  N  *  T  F  T  T  L  S  C  N  K  T  L  L  K  I  K  L  *  T  P  Q  V  K  S  S  H  P  F  *  Y  R  K  N  T  Q  H  Q  I  N  C  I  R  F  Y  I  G  H  N  L  Q  K  K  C  V  *  L  V  T  S  *  G  A  L  S  F  *  A  C  T  L  V  P  F  A  T  H  C  S  P  C  D  L  R  A  E  V  S  Y  F  Q  D  K  W  Q  L  K  T  E  L  Q  N  M  L  N  G  A  S  M  K  K  W  D  Q  C  H  Q  *  Q  P  K  T  F  S  *  S  Q  I  Q  L  L  I  I  I  F  S  S  T  E  S  L  F  Q  L  P  S   </second_frame>
            <third_frame>   L  I  D  N  Y  L  N  K  K  I  N  P  F  G  F  K  F  V  I  T  I  W  R  P  S  N  S  L  A  T  *  P  F  Y  I  L  Y  L  W  *  Y  Y  F  T  I  Y  I  T  K  K  K  *  K  I  K  I  C  C  *  G  K  T  P  Q  T  G  S  D  K  P  L  K  N  P  G  I  A  A  A  C  H  M  T  S  P  I  V  E  I  K  G  D  I  D  T  D  D  L  N  P  F  T  M  I  L  P  Q  D  G  H  D  N  D  A  S  P  Q  Q  Q  K  Q  Q  L  H  F  L  Q  S  I  N  S  N  V  V  I  R  Q  L  P  S  E  G  L  S  F  Q  L  W  P  A  A  T  I  L  V  T  L  L  D  N  T  R  N  G  E  S  T  P  F  S  D  L  F  K  R  Q  E  K  G  V  S  L  P  L  R  I  L  E  L  G  S  G  T  G  V  V  G  I  A  A  A  A  I  L  G  A  K  V  T  V  T  D  L  P  H  V  L  P  N  I  Q  F  N  V  D  A  N  S  Q  V  L  E  Q  Q  S  G  G  V  D  V  A  A  L  S  W  G  D  N  Q  H  M  E  A  V  G  R  D  Y  D  L  I  L  G  S  D  V  V  Y  H  D  H  L  Y  D  P  L  I  N  T  L  R  F  F  L  L  G  G  G  K  K  I  A  F  V  M  A  H  L  R  R  W  K  K  E  S  A  F  F  K  R  A  K  K  L  F  D  V  Q  I  I  H  T  E  P  P  P  D  G  S  R  I  G  V  V  V  Y  L  F  T  G  K  R  *  P  L  *  S  I  K  A  R  C  W  W  D  V  S  L  N  L  I  V  M  S  C  I  T  M  G  M  G  L  A  Q  Q  R  S  K  K  L  L  Y  L  L  Y  V  E  I  Q  S  T  K  K  V  V  Y  Y  C  I  L  I  E  H  S  Q  P  *  V  V  T  K  L  Y  S  K  L  S  Y  K  H  L  K  L  R  A  L  I  H  F  N  T  E  K  I  H  N  I  K  S  I  V  F  A  S  T  L  A  I  I  C  K  K  N  V  Y  N  L  L  L  L  E  E  H  C  H  S  R  L  A  H  L  Y  H  L  Q  P  I  A  A  L  V  T  *  E  Q  K  C  L  T  F  R  I  N  G  N  L  K  L  S  C  R  T  C  *  M  V  L  A  *  R  N  G  I  N  A  T  N  S  N  P  K  H  S  V  N  P  K  S  N  F  S  L  S  S  F  P  Q  L  R  A  S  S  N  C  L  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="-"/>
                <serials PGL_serial="30" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="152889" stop="152038"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>849</number_coding_nucleotides>
                  <number_encoded_amino_acids>283</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GKTPQTGSDKPLKNPGIAAACHMTSPIVEIKGDIDTDDLNPFTMILPQDGHDNDASPQQQKQQLHFLQSINSNVVIRQLPSEGLSFQLWPAATILVTLLDNTRNGESTPFSDLFKRQEKGVSLPLRILELGSGTGVVGIAAAAILGAKVTVTDLPHVLPNIQFNVDANSQVLEQQSGGVDVAALSWGDNQHMEAVGRDYDLILGSDVVYHDHLYDPLINTLRFFLLGGGKKIAFVMAHLRRWKKESAFFKRAKKLFDVQIIHTEPPPDGSRIGVVVYLFTGKR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0215M12.2" strand="-"/>
                <serials PGL_serial="30" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="151845" stop="151618"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VVTKLYSKLSYKHLKLRALIHFNTEKIHNIKSIVFASTLAIICKKNVYNLLLLEEHCHSRLAHLYHLQPIAALVT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 76 chains have been computed
$ 
$ memory statistics:
$ 101688 bytes spliced alignments in total
$ 47 spliced alignments have been stored
$ 2163 bytes was the average size of a spliced alignment
$ 44144 bytes predicted gene locations in total
$ 30 predicted gene locations have been stored
$ 1471 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 87 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-28 16:47:36
-->
