<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:08:31"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591302" ref_strand="+" ref_description="SGN-U591302 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ggaaatggagaaaccaaccctgcaactcttggccagtagctgcaaataatttggggagtaatctccttgtttggtgtgttaattctttagaacacccttgttaattatccattaattttaagaagggggcgtgaccagttgcttacgaagtttgttttagttattgaatgtgctaagtatgaatggaaaccataatcggattattagtggtgtcgtgttggtgcttgggctgttttgattaaagcaaactgcaggaaaattctattttggcattatgtatatgctgaatgtgattatgagtatatactccaacggatgaatacgattaggtaaatgtgttgcgaattataaaacgagttatcgctcggtgtgtcggtgcttcgctgctatagttgcccagacggaactgttttggggagggggctgcctaatgtgatacttcgggttatatgtgttatgggcattgctgcggataatttgcattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="2547" stop="1463"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2247" g_stop="1763" g_length="485"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="485" r_length="485" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U591302" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U591302" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2247" e_stop="1763"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAATGGAGAAACCAACCCTTCAACTCTTGGCCAGCAGCTGCAAATAATTTTGTTAGTAATCTCCTTGTTTGGTGTGTTAATTCTATAGAATACCCTTGTTAATTATCCATTAATTTTAAGAAGGGGGCGTGACCAGTAGCTTAGGAAGTTTGTTTTAGTTATTGAATGTGCTAAGTATGAACGGAAACCATAATCGGATTATTAGTGGTGTCATGTTGGTGCTTGGGCTGTTTTGATTAAAGCAAACTGCAGGAAAATTCTGTTTTGGCATTATGTATATGTTGAATGTTATTATGAGTATATACTCCAAAGGATGAATACGATAAGGTAGATGTGTTGCAAATTATAAAATGAGTTATCGCTCGGTGTGTCGTTGCTTTGCTGGTATGGTTGCCGAGACGGAACTGTTTTGGGGAGGGGGCTGTTTAATATGATTCTTTGGGTTATATGTGTTATTGGTATTGCTGTGGATAATTTTGATTG</genome_strand>
        <mrna_strand>GGAAATGGAGAAACCAACCCTGCAACTCTTGGCCAGTAGCTGCAAATAATTTGGGGAGTAATCTCCTTGTTTGGTGTGTTAATTCTTTAGAACACCCTTGTTAATTATCCATTAATTTTAAGAAGGGGGCGTGACCAGTTGCTTACGAAGTTTGTTTTAGTTATTGAATGTGCTAAGTATGAATGGAAACCATAATCGGATTATTAGTGGTGTCGTGTTGGTGCTTGGGCTGTTTTGATTAAAGCAAACTGCAGGAAAATTCTATTTTGGCATTATGTATATGCTGAATGTGATTATGAGTATATACTCCAACGGATGAATACGATTAGGTAAATGTGTTGCGAATTATAAAACGAGTTATCGCTCGGTGTGTCGGTGCTTCGCTGCTATAGTTGCCCAGACGGAACTGTTTTGGGGAGGGGGCTGCCTAATGTGATACTTCGGGTTATATGTGTTATGGGCATTGCTGCGGATAATTTGCATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U564544" ref_strand="+" ref_description="SGN-U564544 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|113205218|gb|AAT39297.2| (e_value=4e-96) Gag-pol; (*SWP) sp|Q99315|YG31B_YEAST (e_value=4e-31) Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-G; ">
      <seq>cagcttaaatagtcttcatgctcctcttctgaacgtgaatagaccagaatagcggctataaatccaataacaaacatatcaaggaatggattaaatactcaattcattaaatccatgaataccgctggagcaatagtcagcccaaaagacaacactctaaacacataatgcccatatcgggtccggaatgccgtcattgggatatctgcctccctaacccgtacctgatgataacctgaccgcaagtctatctttgaaaaaccctttgcaccctgcaactggtcaaatagatcgtcaatccttgggaggggatacctgttcattattgttactttgttcagctgcctataatcaatgcacatccggagcgacccatccttcttcctcacaaatagtaccggtgctccccaaggtgacgtactaggcctgatgaagcccttttctagtaaatccctcaattgctctttcaattctttcaactcagcaggtgccattctataaggaggtatagatataggttgggtatctggcagtacatctatagtaaactctatctcccgttctggaggaaggcctggaagttcctcggggaatacatcaggaaattcattaactaccgagactgattgaagagtcagtgcctctgcctttatgtcatgcacccgaatcagatggtaaatatagccttttctaaacatcttcccggccttgaagtatgaaatgaacttaccttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="+" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="4845" stop="6174"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5142" g_stop="5874" g_length="733"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="734" r_length="734" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="+" ref_id="SGN-U564544" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>733</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U564544" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5142" e_stop="5874"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCTTAAATGATCTGTATGCTCCTCTTCTGAACGTGAATATACCAGAATATCGTCTATAAATACAATAACAAACATATCAAGGAATGGTTTAAATACTCGATTCATTAAATCCATGAACACCGCTGGAGCATTAGTCAGCCCAAAAGACATCACTCTAAACTCATAATGCCCATATCGGGTCCGGAATGCCGTCTTTGGAATATCAGCCTCCCTTACCCGCACCTGATGATAACCTGACCGCAAGTCTATCTTTGAAAAACACTTTGCACCCTTCAACTGGTCAAATAGATCGTCAATCCTTGGGAGGGGATAGCTGTTCTTTATTGTTACTTTGTTCAACTGCCTATAATCAATGCACATCCGCAGCGACCCATCCTTCTTCCTCACAAACAGTACCGGTGCTCCCCAAGGTGACGTACTAGGCCTGATGAAGCCCTTTTCTAGCAAATCCCTCAATTGCTCTTTCAATTCTTTCAACTCAGCAGGTGCCATTCTATAAGGA-GTATAGATATAGGCTGGGTATCTGGTAGTACATCTACAGTAAACTCTATCTCCCGTTCGGGAGGAAGGCCTGGAAGTTCCTCGGGGAATACATCGGGAAATTTATTAACTACTGGGACTGATTGAAGAGTCGGTGCCTCTGCCTTTATGTCAAGCACCCGAATCAGATGGTAAATATAGCCTTTTCTAACCATCTTCCCGGCCTTGAGGTATGAAATGAACTTACCTTT</genome_strand>
        <mrna_strand>CAGCTTAAATAGTCTTCATGCTCCTCTTCTGAACGTGAATAGACCAGAATAGCGGCTATAAATCCAATAACAAACATATCAAGGAATGGATTAAATACTCAATTCATTAAATCCATGAATACCGCTGGAGCAATAGTCAGCCCAAAAGACAACACTCTAAACACATAATGCCCATATCGGGTCCGGAATGCCGTCATTGGGATATCTGCCTCCCTAACCCGTACCTGATGATAACCTGACCGCAAGTCTATCTTTGAAAAACCCTTTGCACCCTGCAACTGGTCAAATAGATCGTCAATCCTTGGGAGGGGATACCTGTTCATTATTGTTACTTTGTTCAGCTGCCTATAATCAATGCACATCCGGAGCGACCCATCCTTCTTCCTCACAAATAGTACCGGTGCTCCCCAAGGTGACGTACTAGGCCTGATGAAGCCCTTTTCTAGTAAATCCCTCAATTGCTCTTTCAATTCTTTCAACTCAGCAGGTGCCATTCTATAAGGAGGTATAGATATAGGTTGGGTATCTGGCAGTACATCTATAGTAAACTCTATCTCCCGTTCTGGAGGAAGGCCTGGAAGTTCCTCGGGGAATACATCAGGAAATTCATTAACTACCGAGACTGATTGAAGAGTCAGTGCCTCTGCCTTTATGTCATGCACCCGAATCAGATGGTAAATATAGCCTTTTCTAAACATCTTCCCGGCCTTGAAGTATGAAATGAACTTACCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587176" ref_strand="+" ref_description="SGN-U587176 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|54261821|gb|AAV31171.1| (e_value=2e-22) putative polyprotein [Solanum tuberosum]; ">
      <seq>ctcaaatggttctatcaactcatactctattccgatcctactagcaacaaagggagatatatatgataaggtggaacctgggtctatcaatgtatacacacttcgggagaatagtgataatatacctgtgatcacattaggtgacaccccctgatcctgcctattagtcaaagcatatatacggttcgaggcactgctagaactggaagctccaccacgtcctctaccatggcctgctggcgcctgaataccctgccccgtagggcgcatagccacagaagaaaatgaaccagcaacggaccctgtaggctgtgccataccacctgcactacctctaaggtgacactccctcatagtatggccctgacggccgcaagaaaaacacgcacctgtagcccaacgacattccccaggatgggacttaccacaatgagaacactgaggcaaaggtggcctcgactggctcaaactcctgcccatctgtgaccctaacgccctagagctctgaccagcttctgaatatcccatacgatcgaaccccctacccatgaaacgtgggggtgcactctgtgctggctgggaagaaaatctaacatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="+" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="5816" stop="7003"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6116" g_stop="6703" g_length="588"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="599" r_length="599" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="+" ref_id="SGN-U587176" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>588</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U587176" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6116" e_stop="6703"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAAATAGTTCTATCAACTCAGACTCTATTCCGATCCTACTAGCAACAAAGGGAGATATATATGATAAGGTGGAACCTGGGTCTATCAATGCATACACACTTCGGGAGAATAGTGATAATATACCTGTGATCACATTAGGTGACGCCTCTTGATCTTGCCTATTAGTCAAAGCATATATACGGTTTGAGGGACCGCTAGAACTGGAAGCTCCACCACGTCCTCTACCACGGCCTGCTGGCGCCTGAATACCCTGCTCCGTAGGGCGCATAGCCACAGAAGAAGATGAACCAGCAACGGACCCTGTAGGCTGTGCCATACCACCTG--C-A---CT-A----ACACTCCCTCATAGTATGGCCCTGACGGCCGCAAGAAAAACATGCACCCGTAGCCCAACGACATTCCCCAGGATGAGACTTACCACAACGAGAACACCGAGGCAAAGGTGGCCTCGACTGGCTCAAACCCCTGCCCATCTGTGACCCTGACGCCCTAGAGCTCTGACCAGCTCCAGAATATCCCATAAGATCGAACCCCCTACCCATGAAACGTAGAGGTGCACTCTGTGCTGGCTGGGAAGAAAATCTAACATGCT</genome_strand>
        <mrna_strand>CTCAAATGGTTCTATCAACTCATACTCTATTCCGATCCTACTAGCAACAAAGGGAGATATATATGATAAGGTGGAACCTGGGTCTATCAATGTATACACACTTCGGGAGAATAGTGATAATATACCTGTGATCACATTAGGTGACACCCCCTGATCCTGCCTATTAGTCAAAGCATATATACGGTTCGAGGCACTGCTAGAACTGGAAGCTCCACCACGTCCTCTACCATGGCCTGCTGGCGCCTGAATACCCTGCCCCGTAGGGCGCATAGCCACAGAAGAAAATGAACCAGCAACGGACCCTGTAGGCTGTGCCATACCACCTGCACTACCTCTAAGGTGACACTCCCTCATAGTATGGCCCTGACGGCCGCAAGAAAAACACGCACCTGTAGCCCAACGACATTCCCCAGGATGGGACTTACCACAATGAGAACACTGAGGCAAAGGTGGCCTCGACTGGCTCAAACTCCTGCCCATCTGTGACCCTAACGCCCTAGAGCTCTGACCAGCTTCTGAATATCCCATACGATCGAACCCCCTACCCATGAAACGTGGGGGTGCACTCTGTGCTGGCTGGGAAGAAAATCTAACATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587175" ref_strand="+" ref_description="SGN-U587175 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>acatcgttatgtgatgggattggatggttatctgattgacattcctatggcagtgactcttcatccaggtatggacattgctcgggtgcaggcatatgcacagggggtagaggatcggcaccggggacgttagccagatagagattataatagagggccccataagagggctagatcaccaggttatcttgacgagtttctaagcgggcagtctcagcagcattttagattttcttcccagtcagcacaaagtgcacccccacgtttcatgggtaggggggtcgatcgtatgggatattctgaagttggtcagagctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="7179" stop="6304"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6921" g_stop="6604" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="318" r_length="318" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U587175" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>318</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U587175" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6921" e_stop="6604"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATCGTTATGTAATGGGATTGGATCGTTATCTGATTGACGGTTCTATGGCAGTGACTCTTCCGCCAGGTATGGACATTGCTCAGGTGCAGGCATATGCACAGGGGGTAGAGGATCGGCACCGGGGACATCAGCCAGATAGAGATTATAATAGAGGCCAGCATAAGAGGGCTAGATCAGCAGGTTATCCTGACGAGTTTCAAAGCGGGCAGTCTCAGCAGCATGTTAGATTTTCTTCCCAGCCAGCACAGAGTGCACCTCTACGTTTCATGGGTAGGGGGTTCGATCTTATGGGATATTCTGGAGCTGGTCAGAGCTC</genome_strand>
        <mrna_strand>ACATCGTTATGTGATGGGATTGGATGGTTATCTGATTGACATTCCTATGGCAGTGACTCTTCATCCAGGTATGGACATTGCTCGGGTGCAGGCATATGCACAGGGGGTAGAGGATCGGCACCGGGGACGTTAGCCAGATAGAGATTATAATAGAGGGCCCCATAAGAGGGCTAGATCACCAGGTTATCTTGACGAGTTTCTAAGCGGGCAGTCTCAGCAGCATTTTAGATTTTCTTCCCAGTCAGCACAAAGTGCACCCCCACGTTTCATGGGTAGGGGGGTCGATCGTATGGGATATTCTGAAGTTGGTCAGAGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587845" ref_strand="+" ref_description="SGN-U587845 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|82754670|gb|ABB90084.1| (e_value=5e-60) ribosomal; (*ATH) ATCG00900.1 (e_value=1e-60) | Symbol: RPS7.1 | encodes a chloroplast ribosomal protein S7, a constituent of the small subunit of the ribosomal complex | chrC:97478-97945 REVERSE | Aliases: RPS7.1; (*SWP) sp|Q2MI54|RR7_SOLLC (e_value=4e-61) 30S ribosomal protein S7, chloroplastic OS=Solanum lycopersicum GN=rps7-A; ">
      <seq>aaaaatcattggcttatcaaattatctatcgagccgtgaaaaagattcaacaaaagacagaaacaaatccactatccgttttacgtcaagcaatacgtggagtaactcccgatataacagtaaaagcaagacgtgtaggtggatcgactcatcaagttcccattgaaataggatccacacaaggaaaagcacttgccattcgttggttattagcggcatcccgaaaacgtccgggtcgaaatatggctttcaaattaagttccgaattagtggatgctgccaaagggagtggcgatgccatacgcaaaaaggaagagactcatagaatggcagaggcaaatagagcttttgcacattttcgttaatccatgaacaggatctatacatctcgatcggaaaagaatcaagagaaaaagaaagaatcggaattgatcgatagatttctcgaaacaaacgaaaaggaaacgaaagatgaaacataaatcatggatcaactaagccctctcggggactttcttaaagaggaacctcatgtaaataccatggaataaggtttgatcctattcatggagattccgtaactattccaaaaatggaaagttcgacacaattggtatttttttttttggaaattggaaggcagtactaattcatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="12999" stop="11776"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12699" g_stop="12048" g_length="652"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="656" r_length="656" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U587845" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U587845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12699" e_stop="12048"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATCATTGGCTTATCAAATTATCTATCGAGCCGTGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCCGTTTTACGTCAAGCAATACGTGGAGTAACTCTTGATATAACAGTAAAAGCAAGACGTGTAGGTGGATCGACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGCGGCATCCCGAACACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTTGTTAATCCATGAACAGGATCTATACATCTCGATCGGAAAAGAATCAAGAGAAAAAGAAAGAATCAGAATTGATCGATAGATTTCTTGAAACAAACGAAAAGGAAACGAAAGATGAAACATAAATCATGGATCAACTAAGCCCTCTCGGGGACTTTCTTAAAGAGGAACCTCATGTAAATACCATGGAATAAGGTTTGATCCTATTCATGGAGATTCCGTAACTATTCCAAAAATGGAAAGTTCGACACAATTGGTA---TTTTTTTT-GAAATTGGAAGCAGTTACTAATTCATGA</genome_strand>
        <mrna_strand>AAAAATCATTGGCTTATCAAATTATCTATCGAGCCGTGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCCGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAACAGTAAAAGCAAGACGTGTAGGTGGATCGACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGCGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAATCCATGAACAGGATCTATACATCTCGATCGGAAAAGAATCAAGAGAAAAAGAAAGAATCGGAATTGATCGATAGATTTCTCGAAACAAACGAAAAGGAAACGAAAGATGAAACATAAATCATGGATCAACTAAGCCCTCTCGGGGACTTTCTTAAAGAGGAACCTCATGTAAATACCATGGAATAAGGTTTGATCCTATTCATGGAGATTCCGTAACTATTCCAAAAATGGAAAGTTCGACACAATTGGTATTTTTTTTTTTGGAAATTGGAAGGCAGTACTAATTCATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U593380" ref_strand="+" ref_description="SGN-U593380 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157357381|emb|CAO63909.1| (e_value=7e-29) unnamed; ">
      <seq>gggtctcatggagagttcgatcctggctcaggatgaacgctggcggcatgcttaacacatgcaagtcggacgggaaacacgggaaacggtgtttccagtggcggacgggtgagtaacgcgtaagaacctgcccttgggaggggaacaacagctggaaacggctgctaataccccgtaggctgaggagcaaaaggaggaatccgcccgaggaggggctcgcgtctgattagctagttggtgaggcaatagcttaccaaggcgatgatcagtagctggtccgagaggatgatcagccacactgggactgagacacggcccagactcctacgggaggcagcagtggggaattttccgcaatgggcgaaagcctgacggagcaatgccgcgtggaggtagaaggcccacgggtcgngaacttcttttcccggagaagaagcaatgacggtatctggggaataagcatcggctaactctgtgccagcagccgcggtaatacagaggatgcnagcgttatccggaatgattgggcgtaaagcgnctgtangnggntttttaagtccgccgtcaaatcccagggntcnccctggacnngnggnggaaactaccaagnnggantncggtaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="+" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="15282" stop="16504"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15579" g_stop="16204" g_length="626"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="625" r_length="625" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="+" ref_id="SGN-U593380" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>626</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U593380" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15579" e_stop="16204"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCTCATGGAGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCAAGTCGGATGGGAAACACGGGAAACGGTGTTTCCAGTGGCGGACGGGTGAGTAACGCGTAAGAACCTGCCCTTGGGAGGGGAACAACAGCTGGAAACGGCTGCTAATACCCCGTAGGCTGAGGAGCAAAATGAGGAATCCGCCCGAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGACGATGATCAGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCTAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCACAATGGGCGAAAGCCTGATGGAGCAATGCCGCGTGGAGGTAGAAGGCCTACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGTGGTAATACAGAGGATGCAAGCGTTATCCGGAATAATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGG</genome_strand>
        <mrna_strand>GGGTCTCATGGAGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCAAGTCGGACGGGAAACACGGGAAACGGTGTTTCCAGTGGCGGACGGGTGAGTAACGCGTAAGAACCTGCCCTTGGGAGGGGAACAACAGCTGGAAACGGCTGCTAATACCCCGTAGGCTGAGGAGCAAAAGGAGGAATCCGCCCGAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGGCGATGATCAGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAAGGCCCACGGGTCGNGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGATGCNAGCGTTATCCGGAATGATTGGGCGTAAAGCGNCTGTANGNGGNTTTTTAAGTCCGCCGTCAAATCCCAGGGNTC-NCCCTGGACNNGNGGNGGAAACTACCAAGNNGGANTNCGGTAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U602366" ref_strand="+" ref_description="SGN-U602366 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gttcggcctcaatgggaaaataaaatggagcacctaacaacgcancttcncagaccaagaactacgagatcacccctttcattctggggtgacggagggatcgtaccattcgagccgtttttttcntgactcgaaatcgaaatgggagcaggtttgaaaaangatcttanagtgtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="+" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="17439" stop="18215"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17739" g_stop="17915" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="+" ref_id="SGN-U602366" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U602366" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17739" e_stop="17915"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCGGCCTCAATGGGAAAATAAAATGGAGCACCTAACAACGCATCTTCATAGACCAAGAACTACGAGATCACCCCTTTCATTATGGGGTGACGGAGGGATCGTACCATTCGAGACGTTTTTTTCTTGACTCGAAATCGAAATGGGAGCAGGTTTGAAAAAGGATCTTAGAGTGTCT</genome_strand>
        <mrna_strand>GTTCGGCCTCAATGGGAAAATAAAATGGAGCACCTAACAACGCANCTTCNCAGACCAAGAACTACGAGATCACCCCTTTCATTCTGGGGTGACGGAGGGATCGTACCATTCGAGCCGTTTTTTTCNTGACTCGAAATCGAAATGGGAGCAGGTTTGAAAAANGATCTTANAGTGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570769" ref_strand="+" ref_description="SGN-U570769 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|82754279|gb|ABB89938.1| (e_value=6e-120) putative; ">
      <seq>gctacgtcgttcggcagacggtaaaaagccagaactagaaggagacgttgggaaactccataaaacccatgacaatgtttgtttaaatgcagctacagcaagcacgtctacaacaaaaggagctagtggaataagatatacaaatttaaatatgaacaaaatcttcgataaaccatttattccaaagaaccaaaaagactcattatttataccaccgcaaatacatacttactcagaaagtttaaaacaagataaaaaagcctacaaccacataacccgctcatatattgaaaacctttataaaatccaaaattatttaaactcaacacctagatctccaactaccaaaaaccctaacactgattttataacccaaaagctacaagggatataataagttaatagcacaaccgggcaccaatgcaaatctagtaaaaacatgttatagttatggattacttaatacagtttatacccaaacaggagatgaaatatctaccataccagagctatacaaagcctttatgaactataaaagaattactaaaggaacattgttttatataaagttttattcagcaccagcagagatattatttgatgagataaaaccaattatacaagttataaaaattggtttgaccagagatatgataattccagaagatatcggaatacaacaagaaatacaaaagattgagataccagaattctacgccaacaaaagagttataggaatagcaactatcctaaataaactaactaacaattatttaaacggaaactcagtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="20453" stop="19063"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20153" g_stop="19363" g_length="791"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="792" r_length="792" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U570769" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>791</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U570769" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20153" e_stop="19363"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTACGTCGTTCGGCGGACGGTAAAAAGCCAGAACTAGAAGGAGACGTTGGGAAACTCTATAAAACTCATGACAACGTTTGTTTAAATGCAGCTACAGCAAGCACATCTACAACAAAAGGAGCCAGTGGAATAAGATATACAAATTTAAATATGAACAAAATCTTCGATAAACCATTTATTCCAAAGAACCAAAAAGACTCATTATTTATACCACCACAAATACATACTTACTCAGAAAGTTTAAACCAGGATAAAAAAGCCTACAACCACATAACCCGCTCATATATTGAAAACCTTTATAAAATCCAAAATTATTTAAACTCAACACCTAGATCTCCAACTACCAAAGACCCTAATACTGATTTTATAACCCAAAAGCTACAA-GGATATAATAAGTTAATAGCACAACCAGGCACCAATGCAAATCTAGTAAAAACATGTTATAGTTATGGATTACTTAATAAAGTTTATACCCAAACAGGAGATGAAATATCTACCATACCAGAGCTATACAAAGCCTTTATGAACTATAAAAGAATTACTAAAGGAACATTGTTTTATATAATATTTTATTCAGCACCAGCAGAGATATTATTTGATGAGATAAAACCAATTATACAAGTTATAAAAATTGGTTTGACCAGAGATATGATAATTCCAGAAGATATCGGAATACAACAAGAAATACAAAAGATTGAGATACCAGAATTCTACGCCAACAAAAGAGTTATAGGAATAGAAACTATCCTAAATGAACTAACTAACAATTATTTAAACGGAAATTCAGTAT</genome_strand>
        <mrna_strand>GCTACGTCGTTCGGCAGACGGTAAAAAGCCAGAACTAGAAGGAGACGTTGGGAAACTCCATAAAACCCATGACAATGTTTGTTTAAATGCAGCTACAGCAAGCACGTCTACAACAAAAGGAGCTAGTGGAATAAGATATACAAATTTAAATATGAACAAAATCTTCGATAAACCATTTATTCCAAAGAACCAAAAAGACTCATTATTTATACCACCGCAAATACATACTTACTCAGAAAGTTTAAAACAAGATAAAAAAGCCTACAACCACATAACCCGCTCATATATTGAAAACCTTTATAAAATCCAAAATTATTTAAACTCAACACCTAGATCTCCAACTACCAAAAACCCTAACACTGATTTTATAACCCAAAAGCTACAAGGGATATAATAAGTTAATAGCACAACCGGGCACCAATGCAAATCTAGTAAAAACATGTTATAGTTATGGATTACTTAATACAGTTTATACCCAAACAGGAGATGAAATATCTACCATACCAGAGCTATACAAAGCCTTTATGAACTATAAAAGAATTACTAAAGGAACATTGTTTTATATAAAGTTTTATTCAGCACCAGCAGAGATATTATTTGATGAGATAAAACCAATTATACAAGTTATAAAAATTGGTTTGACCAGAGATATGATAATTCCAGAAGATATCGGAATACAACAAGAAATACAAAAGATTGAGATACCAGAATTCTACGCCAACAAAAGAGTTATAGGAATAGCAACTATCCTAAATAAACTAACTAACAATTATTTAAACGGAAACTCAGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589636" ref_strand="+" ref_description="SGN-U589636 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|18450265|ref|NP_569140.1| (e_value=4e-66) putative cell-to-cell movement protein [tobacco vein-clearing virus]; (*SWP) sp|Q01089|MOVP_CAMVW (e_value=2e-16) Movement protein OS=Cauliflower mosaic virus (strain W260) GN=ORF I; ">
      <seq>ggatattatataaaaaaataataaaataaaaagaccatatagaccaaaaagaaaaatattccaatgtacttgttataattgcggaaagataggacatttagctagagattgtaaactacccaaagatccgaaaatgaagcaaattgcagaagtaattatagataatcataaatatatgcaaatagaatacatagactatgaattaagtgaagacgatagtatatatgaagtatcagatatagaaactgaaaatgaagaagaaaatattaatctagataataatgaaacagatgaagaaatataatgtctgaagatgagataaaaataatatctaaagaagattatcaaaatgaagaattatcagactaaaaaattatatttgataatacaatttttgaacaaataaaaggaaaagaattagacttaagtgttgaaaaagtacttgaaatacctactctatgaaattggtttaaaagacaaaaagaagaatattatgtagttagtcaaaaagaacatattatagattgtaaatatgcaagaggaaaaacatatatacctatactaagtaaacgaataataaataaagaaatacaagatataaaagctaaaacaccaataaaatatgtacatttaggaggaacagaaatattaataaaagcttgttttagagaaggaatagatacacctattgaaatatacttagcagatgatagaattatacaccctatagaaaaaagtgtaattagtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="24036" stop="22690"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23737" g_stop="22990" g_length="748"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="749" r_length="749" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U589636" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>748</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U589636" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23737" e_stop="22990"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTATTATGT-AAAAAATCATAAAATAAAAAGACCATACAGACCAAAAAGAAAAATATCCCAATGTACTTGTTATAATTGTGGAAAGATAGGACACATAGCTAAAGATTGTAAATTACCCAAAAATCCAAAAAGAAAACAAATAGAAGAATTAATTATAGACAATGAAAAATATATGCAAATAGAGTACATAGATTATGAATTAAGTGAAAATGATAGTATATATGAAGTATCAGACATAGAAACTGAGAATGAAGAAGAAAATATTAACATAGATAACAACGAAACAGATGAAGAAATATAATGTCTGAAAATGAAATAAAAATAATATCTAAGGAAGAATATCAAGATGAAGAATCATCAGAACAGAAAATTATATTTGATAATACGATATTTGAACAAATAAAAGGAAAAGATTTAGATTTAAGTGTTGAAAAAGTACTAGAAATACCTATTTTAAGAAATTGGTTTAAAAGACAAAAAGAAGAATACTATGTAGTTAGTCAAAAAGAACATATCATAGATTGTAAATTCACAAGAGGAAAAGCATATATACCTATAATAAATAAAAGAATGATAAAAAAAGAAATACAAGATATAAAAGCTAAAACACCAATAAAATATGTACATTTAGGAGGAACAGAAATATTAATAAAAGCCTGCTTTAGAGAAGGAATAGATACACCTATAGAAATATATTTAGCAGATGATAGAATTGTACACCCTATAGAAAAAAGCATAATTAGTGC</genome_strand>
        <mrna_strand>GGATATTATATAAAAAAATAATAAAATAAAAAGACCATATAGACCAAAAAGAAAAATATTCCAATGTACTTGTTATAATTGCGGAAAGATAGGACATTTAGCTAGAGATTGTAAACTACCCAAAGATCCGAAAATGAAGCAAATTGCAGAAGTAATTATAGATAATCATAAATATATGCAAATAGAATACATAGACTATGAATTAAGTGAAGACGATAGTATATATGAAGTATCAGATATAGAAACTGAAAATGAAGAAGAAAATATTAATCTAGATAATAATGAAACAGATGAAGAAATATAATGTCTGAAGATGAGATAAAAATAATATCTAAAGAAGATTATCAAAATGAAGAATTATCAGACTAAAAAATTATATTTGATAATACAATTTTTGAACAAATAAAAGGAAAAGAATTAGACTTAAGTGTTGAAAAAGTACTTGAAATACCTACTCTATGAAATTGGTTTAAAAGACAAAAAGAAGAATATTATGTAGTTAGTCAAAAAGAACATATTATAGATTGTAAATATGCAAGAGGAAAAACATATATACCTATACTAAGTAAACGAATAATAAATAAAGAAATACAAGATATAAAAGCTAAAACACCAATAAAATATGTACATTTAGGAGGAACAGAAATATTAATAAAAGCTTGTTTTAGAGAAGGAATAGATACACCTATTGAAATATACTTAGCAGATGATAGAATTATACACCCTATAGAAAAAAGTGTAATTAGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U580401" ref_strand="+" ref_description="SGN-U580401 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|127706198|ref|YP_398359.2| (e_value=4e-85) cytochrome; (*ATH) ATCG00730.1 (e_value=1e-86) |; (*SWP) sp|Q4VZK4|PETD_CUCSA (e_value=3e-86) Cytochrome b6-f complex subunit 4 OS=Cucumis sativus GN=petD; ">
      <seq>aacaaaaaaacctgacttgaatgatcctgtattaagagctaaattggctaagggtatgggtcataattattatggcgagcccgcatggcccaatgatcttttatatatttttccagtagtaattctaggtactattgcatgtaatgtaggcttagccgttttagaaccatcaatgattggtgaaccagcggatccatttgcaacccctttggaaatcttacctgaatggtatttctttcctgtatttcaaatacttcgtacagtgcccaataaattattgggggttcttttaatggtttcagtacctgcgggattattaacagtaccttttttagagaatgttaataaattccaaaatccatttcgccgtccagtagcgacgactgtctttttgattggtaccgcagtcgccctttggttgggcattggtgcaacattacctattgataaatccctaactttaggtcttttttaaattttttaattgattcaattgtgaactaacacgacatgtgtatctagggaatagtttcttcaaagcgaattctccctagatacatctattcaatttcattattaatttctttctaatatctaatatatgatatattaattgtgctaaattgtgctttttcaatctattttcactaagtaagtccaatagatttaaaacttattttttgctaaatcaattacgaaatatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="+" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="25990" stop="27294"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26289" g_stop="26994" g_length="706"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="706" r_length="706" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="+" ref_id="SGN-U580401" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U580401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26289" e_stop="26994"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACAAAAAAACCTGACTTGAATGATCCTGTATTAAGAGCTAAATTGGCTAAGGGTATGGGTCATAATTATTATGGCGAGCCCGCATGGCCCAATGATCTTTTATATATTTTTCCAGTAGTAATTCTAGGTACTATTGCATGTAATGTAGGCTTAGCCGTTTTAGAACCATCAATGATTGGTGAACCAGCGGATCCATTTGCAACCCCTTTGGAAATCTTACTTGAATGGTATTTCTTTCCTGTATTTCAAATACTTCGTACAGTGCCTAATAAATTATTGGGGGTTCTTTTAATGGTTTCAGTACCTGCGGGATTATTAACAGTACCTTTTTTAGAGAATGTTAATAAATTCCAAAATCCATTTCGCCGTCCAGTAGCGACGACTGTCTTTTTGATTGGTACCGCAGTCGCCCTTTGGTTGGGCATTGGTGCAACATTACCTATTGATAAATCCCTAACTTTAGGTCTTTTTTAAATTTTTTAATTGATTCAATTGTGAACTAACACGACATGTGTATCTAGGGAATAGTTTCTTCAAAGCGAATTCTCCCTAGATACATCTATTCAATTTCATTATTAATTTCTTTCTAATATCTAATATATGATATATTAATTGTGCTAAATTGTGCTTTTTCAATCTATTTTCACTAAGTAAGTCCAATAGATTTAAAACTTATTTTTTGCTAAATCAATTATGAAATATTTT</genome_strand>
        <mrna_strand>AACAAAAAAACCTGACTTGAATGATCCTGTATTAAGAGCTAAATTGGCTAAGGGTATGGGTCATAATTATTATGGCGAGCCCGCATGGCCCAATGATCTTTTATATATTTTTCCAGTAGTAATTCTAGGTACTATTGCATGTAATGTAGGCTTAGCCGTTTTAGAACCATCAATGATTGGTGAACCAGCGGATCCATTTGCAACCCCTTTGGAAATCTTACCTGAATGGTATTTCTTTCCTGTATTTCAAATACTTCGTACAGTGCCCAATAAATTATTGGGGGTTCTTTTAATGGTTTCAGTACCTGCGGGATTATTAACAGTACCTTTTTTAGAGAATGTTAATAAATTCCAAAATCCATTTCGCCGTCCAGTAGCGACGACTGTCTTTTTGATTGGTACCGCAGTCGCCCTTTGGTTGGGCATTGGTGCAACATTACCTATTGATAAATCCCTAACTTTAGGTCTTTTTTAAATTTTTTAATTGATTCAATTGTGAACTAACACGACATGTGTATCTAGGGAATAGTTTCTTCAAAGCGAATTCTCCCTAGATACATCTATTCAATTTCATTATTAATTTCTTTCTAATATCTAATATATGATATATTAATTGTGCTAAATTGTGCTTTTTCAATCTATTTTCACTAAGTAAGTCCAATAGATTTAAAACTTATTTTTTGCTAAATCAATTACGAAATATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585866" ref_strand="+" ref_description="SGN-U585866 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|89280667|ref|YP_514884.1| (e_value=5e-147) RNA; (*ATH) ATCG00740.1 (e_value=3e-122) | Symbol: RPOA | RNA polymerase alpha subunit | chrC:77901-78890 REVERSE | Aliases: RPOA; (*SWP) sp|Q2MI69|RPOA_SOLLC (e_value=3e-148) DNA-directed RNA polymerase subunit alpha OS=Solanum lycopersicum GN=rpoA; ">
      <seq>atgagtttagccaatttatcatgaaaggtaaaaggggataaaggaaccgtgtgttgattgtcctgtaaatataagttgtcttcctccatatgtaaaaagggaataaataaatcaattaaatttcgggatgcgtcatgaagtgcttctttcggagttaaacttccgtttgtccatatttcgataaaaagtatctcttgtttttcattcccattcccataagaatgaatactatgattcgcgtttcgaacaggcatgaatacagcatctataggataacttccatcttgaaagttatgtggcgtttttataagatatccacgatttctctctatttgtaatccaatacaaaaatcaattggttccgttaaactagctatatgttgtgtattatcaacgatttccacataaggtggcaagatgatatcttgagcagttacatatccaggacccttgacacaaatagacgcctcagaagttccatataaattacttctcaatacaatctctttcaaattcattaaaatttcatgtaccgattcttgaatgcccgttatggtagaatattcatgtggtactttctcaaattttacacgtgtgatacatgttccttctatttccccaagtaaagctcttcgcatcgcaatgcctattgtgtcggcttggcctttcataagtggagacagaataaagcgtccataataaaggcgtttactgtctattcttgattcaacacacttccactgtagtgtccgagtagatactgttactttctctcgaaccatagtactattatttgattagatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="+" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="26886" stop="28288"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27186" g_stop="27988" g_length="803"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="804" r_length="804" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="+" ref_id="SGN-U585866" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>803</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585866" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27186" e_stop="27988"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAGTTTAGCCAATTTATCATGAAAGGTAAAAGGGGATAAAGGAACCGTGTGTTGATTGTCCTGTAAATATAAGTTGTCTTCCTCCATATGTAAAAAGGGAATAAATAAATCAATTAAATTTTGGGATGCGTCATGAAGTGCTTTTTTCGGAGTTAAACTTCCGTTTGTCCATATTTCGATAAAAAGTATCTCTTGTTTTTCATTCCCATTCCCATAAGAATGAATACTATGATTCGCGTTTCGAACAGGCATGAATAAAGCATCTTTAGGATAACTTCCATCTTGAAAGTTATGTGGCGTTTTTATAAGATATCCACGATTTCTCTCTA-TTGTAATCTAATACAAAAATCAATTGGTTCCGTTAAACTAGCTATATGTTGTGTATTATCAACGATTTCCACATAAGGTGGCAAGATGATATCTTGAGCAGTTACATATCCGGGACCATTGAAACAAATAGACGCCTCAGAAGTTCCATATAAATTACTTCTCAATACAATCTCTTTCAAATTCATTAAAATTTCATGTACCGATTCTTGAATGCCCGTTATGGTAGAATATTCATGTGGTACTTTCTCAGATTTTACACGTGTGATACATGTTCCTTCTATTTCCCCAAGTAAAGCTCTTCGCATCGCAATGCCTATTGTGTCGGCTTGGCCTTTCATAAGTGGAGACAGAATAAAGCGTCCATAATAAAGGCGTTTACTGTCTGTTCTTGATTCAACACACTTCCACTGTAGTGTCCGAGTAGATACTGTTACTTTCTCTCGAACCATAGTACTATTATTTGATTAGATC</genome_strand>
        <mrna_strand>ATGAGTTTAGCCAATTTATCATGAAAGGTAAAAGGGGATAAAGGAACCGTGTGTTGATTGTCCTGTAAATATAAGTTGTCTTCCTCCATATGTAAAAAGGGAATAAATAAATCAATTAAATTTCGGGATGCGTCATGAAGTGCTTCTTTCGGAGTTAAACTTCCGTTTGTCCATATTTCGATAAAAAGTATCTCTTGTTTTTCATTCCCATTCCCATAAGAATGAATACTATGATTCGCGTTTCGAACAGGCATGAATACAGCATCTATAGGATAACTTCCATCTTGAAAGTTATGTGGCGTTTTTATAAGATATCCACGATTTCTCTCTATTTGTAATCCAATACAAAAATCAATTGGTTCCGTTAAACTAGCTATATGTTGTGTATTATCAACGATTTCCACATAAGGTGGCAAGATGATATCTTGAGCAGTTACATATCCAGGACCCTTGACACAAATAGACGCCTCAGAAGTTCCATATAAATTACTTCTCAATACAATCTCTTTCAAATTCATTAAAATTTCATGTACCGATTCTTGAATGCCCGTTATGGTAGAATATTCATGTGGTACTTTCTCAAATTTTACACGTGTGATACATGTTCCTTCTATTTCCCCAAGTAAAGCTCTTCGCATCGCAATGCCTATTGTGTCGGCTTGGCCTTTCATAAGTGGAGACAGAATAAAGCGTCCATAATAAAGGCGTTTACTGTCTATTCTTGATTCAACACACTTCCACTGTAGTGTCCGAGTAGATACTGTTACTTTCTCTCGAACCATAGTACTATTATTTGATTAGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584886" ref_strand="+" ref_description="SGN-U584886 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|81301601|ref|YP_398897.1| (e_value=1e-54) ribosomal; (*ATH) ATCG00750.1 (e_value=1e-53) | Symbol: RPS11 | 30S chloroplast ribosomal protein S11 | chrC:78960-79376 REVERSE | Aliases: RPS11; (*SWP) sp|P69656|RR11_TOBAC (e_value=6e-56) 30S ribosomal protein S11, chloroplastic OS=Nicotiana tabacum GN=rps11; ">
      <seq>accgaaaattagttcgcgtcggaatggacgtattagttcacgtaagggggcacgtagaataccaaagggagttattcatgttcaagcaagtttcaataataccattgtcactgttacagatgtacggggtcgagtagtttcttggtcctcagctggtacttctggattcaaaggtacgagaagaggaacaccgtttgctgctcaaaccgcagcagcaaacgctatccgtacagtagtggatcaaggtatgcaacgagcagaagtcatgataaaaggtcccggtctcggaagagatgcagcattacgagctattcgtcgcagtggtatactattaactttcgtacgggatgtaactccgatgccacataatggctgtagacctccgaaaaaaagacgtgtgtag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="28734" stop="27732"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28434" g_stop="28032" g_length="403"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="403" r_length="403" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U584886" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>403</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584886" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28434" e_stop="28032"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCAAAAATTAGTTCGCGTCGGAATGGACGTATTAGTTCACGTAAGGGTGCACGTAGAATACCAAAGGGAGTTATTCATGTTCAAGCAAGTTTCAATAATACCATTATCACTGTTACAGATGTACGGGGTCGAGTAGTTTCTTGGTCCTCAACTGGTACTTCTGGATTCAAAGGTACGAGAAGAGGAACACTGTTTGCTGCTCAAACCGCAGCAACAAACGCTATCCGTACAGTAGTTGATCAAGGTATGGAACGAGCAGAAGTCATGATAAAAGGTCCCGGTCTCGGAAGAGATGCAGCATTACGAGCTATTCGTCGCAGTGGTATACTATTAACTTTCGTACGGGATGTAACTCCGATGCCACATAATGGCTGTAGACCTCTGAAAAAAAGACGTGTGTAG</genome_strand>
        <mrna_strand>ACCGAAAATTAGTTCGCGTCGGAATGGACGTATTAGTTCACGTAAGGGGGCACGTAGAATACCAAAGGGAGTTATTCATGTTCAAGCAAGTTTCAATAATACCATTGTCACTGTTACAGATGTACGGGGTCGAGTAGTTTCTTGGTCCTCAGCTGGTACTTCTGGATTCAAAGGTACGAGAAGAGGAACACCGTTTGCTGCTCAAACCGCAGCAGCAAACGCTATCCGTACAGTAGTGGATCAAGGTATGCAACGAGCAGAAGTCATGATAAAAGGTCCCGGTCTCGGAAGAGATGCAGCATTACGAGCTATTCGTCGCAGTGGTATACTATTAACTTTCGTACGGGATGTAACTCCGATGCCACATAATGGCTGTAGACCTCCGAAAAAAAGACGTGTGTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568772" ref_strand="+" ref_description="SGN-U568772 Tomato 200607#2 [10 ESTs aligned] (*GB) gi|124199|sp|P12136|IF1C_TOBAC (e_value=3e-29) Putative translation initiation factor IF-1, chloroplast; (*SWP) sp|P12136|IF1C_TOBAC (e_value=1e-30) Putative translation initiation factor IF-1, chloroplastic OS=Nicotiana tabacum GN=infA; ">
      <seq>tataatgacagaccgagaggctcgactagaaggaataggtggagaaattttgtgttatatctggtaatcctttataatatgcaaattgaattcgaaacttcctatttgcgaaaaagggggggagagttatctaatatctttcgcattagttgatacctcaaaggaactttgttttatacagatactgccaggagatagagtcaaaattgaagtaagtccttatgattcaaccaaaggacatataatttatcgactccacaacaaagatttgaaggattaggttttcaacttcaccattcctttcgtgggaatacaattcgagatgaaaaatttcaagaaacttattttcttccaagaaatagattcagaattaaggtaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="29354" stop="28376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29054" g_stop="28676" g_length="379"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="379" r_length="379" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U568772" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>379</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U568772" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29054" e_stop="28676"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATAATGACAGACCGAGAGGCTCGACTAGAAGGAATAGGTGGAGAAATTTTGTGTTATATCTGGTAATCCTTTATAATATGCAAATTGAATTCGAAACTTCCTATTTGCGAAAAAGGAGGGGAGAGTTATCTAATATCTTTCGCATTAGTTGATACCTCAAAGGAACTTTGTTTTATACAGATACTGCAAGGAGATAGAGTCAAAATTGAAGTAAGTCCTTATGATTCAACCAAAGGACATATAATTTATCGACTCCACAACAAAGATTTGAAGGATTAGGTTTTCAACTTCACCATTCCTTTCGTGGGAATACAATTCGAGATGAAAAATTTCAAGAAACTTATTTTCTTCCAAGAAATAGATTCAGAATTAAGGTAA</genome_strand>
        <mrna_strand>TATAATGACAGACCGAGAGGCTCGACTAGAAGGAATAGGTGGAGAAATTTTGTGTTATATCTGGTAATCCTTTATAATATGCAAATTGAATTCGAAACTTCCTATTTGCGAAAAAGGGGGGGAGAGTTATCTAATATCTTTCGCATTAGTTGATACCTCAAAGGAACTTTGTTTTATACAGATACTGCCAGGAGATAGAGTCAAAATTGAAGTAAGTCCTTATGATTCAACCAAAGGACATATAATTTATCGACTCCACAACAAAGATTTGAAGGATTAGGTTTTCAACTTCACCATTCCTTTCGTGGGAATACAATTCGAGATGAAAAATTTCAAGAAACTTATTTTCTTCCAAGAAATAGATTCAGAATTAAGGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584966" ref_strand="+" ref_description="SGN-U584966 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|28261753|ref|NP_783267.1| (e_value=1e-61) ribosomal protein L14 [Atropa belladonna]; (*ATH) ATCG00780.1 (e_value=9e-60) | Symbol: RPL14 | encodes a chloroplast ribosomal protein L14, a constituent of the large subunit of the ribosomal complex | chrC:80696-81064 REVERSE | Aliases: RPL14; (*SWP) sp|Q3C1L9|RK14_NICSY (e_value=8e-63) 50S ribosomal protein L14, chloroplastic OS=Nicotiana sylvestris GN=rpl14; ">
      <seq>gaacagaaaatatagccagaagggctatttcactagcagcatccaaaatgcctatacgaactcaattcattatttcgtaatgtaatagaaaaaaatgtagaaagggctcttagatatgaaagaaaaccgcatgtttcttttttttggacaaaaatatttctttttttttttcttcgccctttgcattcaaagaacggattaaaaaaatgattcaacctcagacccatttaaatgtagcggataatagcggggctcgagaattgatgtgtattcgaatcataggagctagcaatcgtcgatatgctcatattggtgacgttattgttgctgtgatcaaagaagcagtaccaaatatgcccctagaaagatcagaagtagtcagagctgtaattgtgcgtacctgtaaagaactcaaacgtgacaacgggatgataatacgatacgatgacaatgctgcagttgttattgatcaagaaggaaatccaaaaggaactcgaatttttggtgcaatcgcccgggaattgagagaattaaattttactaaaatagtttcattagctcccgaggtattataaaatgaaattgtgatctgtttcgagtggggtatctgaaagaaatagttaatttaggtaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="30295" stop="29064"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29996" g_stop="29364" g_length="633"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="636" r_length="636" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U584966" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584966" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29996" e_stop="29364"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAACAGAAAATATAGCCAGAAGGGCTATTTCACTAGAAGCATCCAAAATGCCTATACGAACTCAATTCATTATTTCGTAATGTAATAGAAAAAAATGTAGAAAGGGCTCTTAGATATGAAAGAAAACCGCATGTTTCTTTTTTTTGGACAAAAATATTTC--TTTTTTTTTCTTCGCCCTTTGCATTCAAAGAACGGATTAAAAAAATGATTCAACCTCAGACCCATTTAAATGTAGCGGATAATAGCGGGGCTCGAGAATTGATGTGTATTCGAATCATAGGAGCTAGCAATCCTCGATATGCTCATATTGGTGACGTTATTGTTGCTGTGATCAAAGAAGCAATACCAAATATGCCCCTAGAAAGATCAGAAGTAGTCAGAGCTGTAATTTTGCATACCTGTAAAGAACTCAAACGTGACAACGGGATGATAATACTATACGATGACAATGCTGCAGTTGTTATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATCGCCCGGGAATTGAGAGAATTAAATTTTACTAAAATAGTTTCATTAGCTCCCGAGGTATTATAAAATGAAATTGTGATCTGTTTCGAGTGGGGTATTTGAAAGAAATAGATTAATTTG-TAGATT</genome_strand>
        <mrna_strand>GAACAGAAAATATAGCCAGAAGGGCTATTTCACTAGCAGCATCCAAAATGCCTATACGAACTCAATTCATTATTTCGTAATGTAATAGAAAAAAATGTAGAAAGGGCTCTTAGATATGAAAGAAAACCGCATGTTTCTTTTTTTTGGACAAAAATATTTCTTTTTTTTTTTCTTCGCCCTTTGCATTCAAAGAACGGATTAAAAAAATGATTCAACCTCAGACCCATTTAAATGTAGCGGATAATAGCGGGGCTCGAGAATTGATGTGTATTCGAATCATAGGAGCTAGCAATCGTCGATATGCTCATATTGGTGACGTTATTGTTGCTGTGATCAAAGAAGCAGTACCAAATATGCCCCTAGAAAGATCAGAAGTAGTCAGAGCTGTAATTGTGCGTACCTGTAAAGAACTCAAACGTGACAACGGGATGATAATACGATACGATGACAATGCTGCAGTTGTTATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATCGCCCGGGAATTGAGAGAATTAAATTTTACTAAAATAGTTTCATTAGCTCCCGAGGTATTATAAAATGAAATTGTGATCTGTTTCGAGTGGGGTATCTGAAAGAAATAGTTAATTTAGGTAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U601812" ref_strand="+" ref_description="SGN-U601812 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gcaaggtattactcagtaaatacatatgggatatatcttaacttaagatttactattctagctgaattcaaattggatttttttgagtccttttattggcgaggagctggatgagaagaaactctgacgtccggtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="30788" stop="30054"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30489" g_stop="30354" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="136" r_length="136" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U601812" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>136</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U601812" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30489" e_stop="30354"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGGTATTACTCAGTAAATACATATCTTATATATCTTAACTTAAGATTTACTATTCTAGCTTAATTCAAATAGAATTTTTTTGAATCCTTTTATTTGCGGGGAGCTGGATGAGAAGAAACTCTCACGTCCGGTT</genome_strand>
        <mrna_strand>GCAAGGTATTACTCAGTAAATACATATGGGATATATCTTAACTTAAGATTTACTATTCTAGCTGAATTCAAATTGGATTTTTTTGAGTCCTTTTATTGGCGAGGAGCTGGATGAGAAGAAACTCTGACGTCCGGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563870" ref_strand="+" ref_description="SGN-U563870 Tomato 200607#2 [4 ESTs aligned] ">
      <seq>gtcgttcccatcacttcttacnaaatgttagggtccgaattctacattggagctcataatcaaattggttcttgagtcaatcttcttagtctttattggctcgaagctcttgattttttgttctatttctataagaagattctttttagtatggtatgaatgcgtattgatgctttattacactgtcttttatgaaattactcatagaccttacatattggagttttatatcattggtattctttttctctctttctctcatccttccctttatccacatcttttttgtctattttgctttacaacttagaagcagatttttttgtttatgcaaaagatttcagttgctacaaagatatgacctatatatcatatcttgactggttctttagatccagataatgcgaagtgatgggttggttattagttctatagtttttagttcatactatgtgggctgggtttttttaatcctaaccctaacaaaacccacgagtcacacactaagcatagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="+" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="30528" stop="31641"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30828" g_stop="31341" g_length="514"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="514" r_length="514" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="+" ref_id="SGN-U563870" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U563870" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30828" e_stop="31341"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGTTCCAATCACTTCTTACTTAATGGTTAGGTCCGAATTCTTCAATGGAGCTCAGAATCAAATTGTTTCTTGAGTCAATCTTCTTTGTCTTTATTGGATCGAAGCTCTTGATTTTTTGTTCTATTTCTATAAGAAGATTCTTTTTAGTATGGTATGAATGCGTATTGATGCTTTATTACACTGTCTTTTATGAGATTACTCATAGACCTTACATATTGGAATTTTATATCATTGGTATTCTTTTTCTCTCTTTCTCTCATCCTTCCCTTTATCCACATCTTTTTTGTCTATTTTGCTTTACAACTTAGAAGCAGATTTTTTTGTTTATGCAAAAGATTTCAGTTGCTACAAAGATATGACCTATATATCATATCTTGACTGGTTCTTTAGATCCAGATAATGCGAAGTGATGGGTTGGTTATTAGTTCTATAGTTTTTAGTTCATACTATGTGGGCTGGGTTTTTGTAATCCTAACCCTAACAAAACCTACGAGTCACACGCTAAGCATAGC</genome_strand>
        <mrna_strand>GTCGTTCCCATCACTTCTTACNAAATGTTAGGGTCCGAATTCTACATTGGAGCTCATAATCAAATTGGTTCTTGAGTCAATCTTCTTAGTCTTTATTGGCTCGAAGCTCTTGATTTTTTGTTCTATTTCTATAAGAAGATTCTTTTTAGTATGGTATGAATGCGTATTGATGCTTTATTACACTGTCTTTTATGAAATTACTCATAGACCTTACATATTGGAGTTTTATATCATTGGTATTCTTTTTCTCTCTTTCTCTCATCCTTCCCTTTATCCACATCTTTTTTGTCTATTTTGCTTTACAACTTAGAAGCAGATTTTTTTGTTTATGCAAAAGATTTCAGTTGCTACAAAGATATGACCTATATATCATATCTTGACTGGTTCTTTAGATCCAGATAATGCGAAGTGATGGGTTGGTTATTAGTTCTATAGTTTTTAGTTCATACTATGTGGGCTGGGTTTTTTTAATCCTAACCCTAACAAAACCCACGAGTCACACACTAAGCATAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575798" ref_strand="+" ref_description="SGN-U575798 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|89280673|ref|YP_514890.1| (e_value=2e-120) ribosomal; (*ATH) ATCG00800.1 (e_value=3e-112) | Symbol: RPS3 | encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex | chrC:82826-83482 REVERSE | Aliases: RPS3; (*SWP) sp|Q2MI62|RR3_SOLLC (e_value=1e-121) 30S ribosomal protein S3, chloroplastic OS=Solanum lycopersicum GN=rps3; ">
      <seq>atgggacaaaaaataaatccacttggtttcagactgggtacaacccaaagtcatcattccctttggttttcacaacccaaaaattattctgagggtttacaagaagataaaaaaatcagagattgtatcaagaattatgtacaaaaaaatatgagaacgtcctctggcatcgagggaattgcacgtatagagattcaaaaaagaatcgatctgatccaggtcataatctttatgggattcccaaaattattaatagaaagtcgaccgcgcggaatcgaagaattacaaatgaccttacaaaaagaatttaattgtgtaaaccgaaaactgaacattgctgtcacaagaattgcaaaaccttacggaaaccctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaagcaatgaaaaaggctattgaattaacagaacaagcggatacaaaaggaattcaaatacaaattgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggcagggttcccctacaaacgattcgagctaaaattgattattgctcttatacagttcgaactatctatggaatattgggcatcaaaatttggatatttctagacgaggaataattttactacttgtctttcccttctatccaatgattgaacaaaaaaaaagaccaattcattctttttctaatcaaggggaacatttctaattcttaattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="32434" stop="31101"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32134" g_stop="31401" g_length="734"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="756" r_length="756" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U575798" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>734</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U575798" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32134" e_stop="31401"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGGACAAAAAATAAATCCACTTGGTTTCAGACTGGGTACAACGCAAGGTCATCATTCCCTTTGGTTTTCACAACCCAAAAATTATTCTGAGGGTTTACAAGAAGA-AAACAAATCAGAGATTGTATCAAGAATTATGTACAAAAAAATATGAGAATGTCCTCTGGCATCGAGGGAATTGCACGTATAGAGATTCAAAAAAGAATCGATCTGATCCAGGTCATAATCTTTATGGGATTCCCAAAATTATTAATAGAAAGTCAACCGCGCGAAATCGAAGAATTACAAATGACCTTACAAAATGAATTTAATTGTGTAAACCGAAAACTGAACATTGCTGTCAAAAGAATTGCAAAACCTTACGGAAACCCTAATATTCTTGCAGAATTTATAGTTGGACAATTAAAGAATAGAGTTTCATTTCGAAAAGCAATGAAAAAGGCTATTGAATT-----AAC-A---GA-AC--AA-G--------TACAAATTGCGGGGCGTATCGACGGAAAAGAAATTGCACGTGTCGAATGGATCAGAGAAGGCAAGGTTCCCCTACAAACGATTCGAGCTAAAATTGATTATTGCTCTTATACAGTTCGAACTATCTATGGAATATTGGGCATCAAAATTTAGATATTTCTAGACGAGGAATAATTTTAGTACTTGTCTTTCCCTTCTATCCAATGATTGAACAAAAAAAAAGACCAATTCATTCTTTTTCTAATCAAGGGGAACATTACTAATTCTTAATTC</genome_strand>
        <mrna_strand>ATGGGACAAAAAATAAATCCACTTGGTTTCAGACTGGGTACAACCCAAAGTCATCATTCCCTTTGGTTTTCACAACCCAAAAATTATTCTGAGGGTTTACAAGAAGATAAAAAAATCAGAGATTGTATCAAGAATTATGTACAAAAAAATATGAGAACGTCCTCTGGCATCGAGGGAATTGCACGTATAGAGATTCAAAAAAGAATCGATCTGATCCAGGTCATAATCTTTATGGGATTCCCAAAATTATTAATAGAAAGTCGACCGCGCGGAATCGAAGAATTACAAATGACCTTACAAAAAGAATTTAATTGTGTAAACCGAAAACTGAACATTGCTGTCACAAGAATTGCAAAACCTTACGGAAACCCTAATATTCTTGCAGAATTTATAGCTGGACAATTAAAGAATAGAGTTTCATTTCGAAAAGCAATGAAAAAGGCTATTGAATTAACAGAACAAGCGGATACAAAAGGAATTCAAATACAAATTGCGGGGCGTATCGACGGAAAAGAAATTGCACGTGTCGAATGGATCAGAGAAGGCAGGGTTCCCCTACAAACGATTCGAGCTAAAATTGATTATTGCTCTTATACAGTTCGAACTATCTATGGAATATTGGGCATCAAAATTTGGATATTTCTAGACGAGGAATAATTTTACTACTTGTCTTTCCCTTCTATCCAATGATTGAACAAAAAAAAAGACCAATTCATTCTTTTTCTAATCAAGGGGAACATTTCTAATTCTTAATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588052" ref_strand="+" ref_description="SGN-U588052 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|115605060|ref|YP_784512.1| (e_value=1e-15) ribosomal; (*ATH) ATCG00800.1 (e_value=2e-17) | Symbol: RPS3 | encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex | chrC:82826-83482 REVERSE | Aliases: RPS3; (*SWP) sp|Q2MI62|RR3_SOLLC (e_value=5e-17) 30S ribosomal protein S3, chloroplastic OS=Solanum lycopersicum GN=rps3; ">
      <seq>gcgtatcgacggaaaacaaattgcacgtgacgaatggataatagaacgcatggttcctctaccaactattctagctaaaattgattattgctcttatacaattcgaactatctatggaatattgggcatcaaaatttggatatttctacactaggaataattttactacttgtctttcccttctatccaatgattgaacaaaaaataagaccaattcattctttttctaatcacggggaacatttctaattcttaattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="31959" stop="31101"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31659" g_stop="31401" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="259" r_length="259" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U588052" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>259</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588052" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31659" e_stop="31401"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGTATCGACGGAAAAGAAATTGCACGTGTCGAATGGATCAGAGAAGGCAAGGTTCCCCTACAAACGATTCGAGCTAAAATTGATTATTGCTCTTATACAGTTCGAACTATCTATGGAATATTGGGCATCAAAATTTAGATATTTCTAGACGAGGAATAATTTTAGTACTTGTCTTTCCCTTCTATCCAATGATTGAACAAAAAAAAAGACCAATTCATTCTTTTTCTAATCAAGGGGAACATTACTAATTCTTAATTC</genome_strand>
        <mrna_strand>GCGTATCGACGGAAAACAAATTGCACGTGACGAATGGATAATAGAACGCATGGTTCCTCTACCAACTATTCTAGCTAAAATTGATTATTGCTCTTATACAATTCGAACTATCTATGGAATATTGGGCATCAAAATTTGGATATTTCTACACTAGGAATAATTTTACTACTTGTCTTTCCCTTCTATCCAATGATTGAACAAAAAATAAGACCAATTCATTCTTTTTCTAATCACGGGGAACATTTCTAATTCTTAATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U573617" ref_strand="+" ref_description="SGN-U573617 Tomato 200607#2 [18 ESTs aligned] (*GB) gi|28261758|ref|NP_783272.1| (e_value=3e-69) ribosomal protein L2 [Atropa belladonna]; (*ATH) ATCG00830.1 (e_value=3e-67) | Symbol: RPL2.1 | encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex | chrC:84337-85843 REVERSE | Aliases: RPL2.1; (*SWP) sp|Q2MI59|RK2_SOLLC (e_value=2e-70) 50S ribosomal protein L2, chloroplastic OS=Solanum lycopersicum GN=rpl2-A; ">
      <seq>ccgatatgcccttaggcacggccatacataacatagaaatcacacttggaaagggtggacaattagctagagcagcgggtgctgtagcgaaactgattgcaaaagaggggaaatcggccacattaaaattaccttctggggaggtccgtttgatatccaaaaactgctcagcaacagtcggacaagtggggaatgttggggtgaaccagaaaagtttgggtagagccggatctaagcgttggctaggtaagcgtcctgtagtaagaggagtagttatgaaccctgtagaccatccccatgggggtggtgaagggagagccccaattggtagaaaaaaacccacaaccccttggggttatcctgcacttggaagaagaagtagaaaaaggaataaatatagtgataatttgattcttcgtcgccgtagtaaataggagagaaaatagaatttaattattcgtttttacaaaaactttacaaaaaaaaataggagtaagcttgtgacacgttcactaaaaaaaaatccctttgtagccaatcatttattaaaaaaaaattgataagcttaacacaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="33712" stop="32542"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33413" g_stop="32842" g_length="572"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="576" r_length="576" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U573617" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U573617" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33413" e_stop="32842"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGATATGCCCTTAGGCACGTCCATACATAACATAGAAATCACACTTGGAAAGGGTGGACAATTAGCTAGAGCAGCGGGTGCTGTAGCAAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCAAAAAACTGCTCAGCAACAATCGGACAAGTGGGGAATGTTGGGGTGAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAGCGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTATTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGAGCCCCAATTGGTAGAAAAAAACCCACAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAGGAGAGAAAATAGAATTTAATTATTCGTTTTTACAAAAACTTTAC-AAAAAAAATAGCAGTAAGCTTGTGACACGTTCACT-AAAAAAAATCCCTTTGTAGCCAATCATTTATT--AAAAAAATTGATAAGCTTAACACAAAA</genome_strand>
        <mrna_strand>CCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTTGGAAAGGGTGGACAATTAGCTAGAGCAGCGGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAACTGCTCAGCAACAGTCGGACAAGTGGGGAATGTTGGGGTGAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAGCGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGAGCCCCAATTGGTAGAAAAAAACCCACAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAGGAGAGAAAATAGAATTTAATTATTCGTTTTTACAAAAACTTTACAAAAAAAAATAGGAGTAAGCTTGTGACACGTTCACTAAAAAAAAATCCCTTTGTAGCCAATCATTTATTAAAAAAAAATTGATAAGCTTAACACAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587546" ref_strand="+" ref_description="SGN-U587546 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|139387293|ref|YP_001123414.1| (e_value=5e-33) ribosomal; (*ATH) ATCG00830.1 (e_value=5e-34) | Symbol: RPL2.1 | encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex | chrC:84337-85843 REVERSE | Aliases: RPL2.1; (*SWP) sp|Q2MI59|RK2_SOLLC (e_value=3e-34) 50S ribosomal protein L2, chloroplastic OS=Solanum lycopersicum GN=rpl2-A; ">
      <seq>ccgatatgcccttaggcacggccatacataacatagaaatcacacttggaaagggtggacaattagctagagcagcgggtgctgtagcgaaactgattgcaaaagaggggaaatcggccacattaaaattaccttctggggaggtccgtttgatatccaaaaactgctcagcaacagtcggacaagtggggaatgttggggtgaaccagaaaagtttgggtagagccggatctaagcgttggctnnnaagcgtcctgtagtaannnnntagttatgaaccctgtagaccatccccatggggggtng</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="33712" stop="32810"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33413" g_stop="33110" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U587546" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>304</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U587546" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33413" e_stop="33110"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGATATGCCCTTAGGCACGTCCATACATAACATAGAAATCACACTTGGAAAGGGTGGACAATTAGCTAGAGCAGCGGGTGCTGTAGCAAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCAAAAAACTGCTCAGCAACAATCGGACAAGTGGGGAATGTTGGGGTGAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAGCGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTATTTATGAACCCTGTAGACCATCCCCATGGGGG</genome_strand>
        <mrna_strand>CCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACTTGGAAAGGGTGGACAATTAGCTAGAGCAGCGGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAACTGCTCAGCAACAGTCGGACAAGTGGGGAATGTTGGGGTGAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAGCGTTGGCT-NNNAAGCGTCCTGTAGTAA-NNNNNTAGTTATGAACCCTGTAGACCATCCCCATGGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571342" ref_strand="+" ref_description="SGN-U571342 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|28261781|ref|NP_783294.1| (e_value=3e-41) Ycf2 [Atropa belladonna]; (*ATH) ATCG00860.1 (e_value=2e-35) | Symbol: YCF2.1 | hypothetical protein | chrC:86474-93358 FORWARD | Aliases: YCF2.1; (*SWP) sp|Q3C1N4|YCF2_NICSY (e_value=2e-42) Protein ycf2 OS=Nicotiana sylvestris GN=ycf2-A; ">
      <seq>gatccgatccgcaaggaccatgattgggaattgtttgatcgtctttctctgaggaagagtcgaaatagaatcaacttgaattcgggaccgctattcgaaatcttagtgaaacactggatttcttatctcatgtctgcttttcgtgaaaaaataccaattgaagtggagggtttcttcaaacaacaaggggctgggtcaactattcaatcaaatgatattgagcatgtttcccatctcttctcgagggggggccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="+" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="35494" stop="36338"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35794" g_stop="36038" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="245" r_length="245" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="+" ref_id="SGN-U571342" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>245</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571342" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35794" e_stop="36038"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCCGATCCGCAAGGACCATGATTGGGAATTGTTTGATCGTCTTTCTCTGAGGAAGAGTCGAAATAGAATCAACTTGAATTCGGGACCGCTATTCGAAATCTTAGTGAAACACTGGATTTCTTATCTCATGTCTGCTTTTCGTGAAAAAATACCAATTGAAGTGGTGGGTTTCTTCAAACAACAAGGGGCTGGGTCAATTATTCAATCAAATGATATTGAGCATGTTTACCATCTCTTCTCGAG</genome_strand>
        <mrna_strand>GATCCGATCCGCAAGGACCATGATTGGGAATTGTTTGATCGTCTTTCTCTGAGGAAGAGTCGAAATAGAATCAACTTGAATTCGGGACCGCTATTCGAAATCTTAGTGAAACACTGGATTTCTTATCTCATGTCTGCTTTTCGTGAAAAAATACCAATTGAAGTGGAGGGTTTCTTCAAACAACAAGGGGCTGGGTCAACTATTCAATCAAATGATATTGAGCATGTTTCCCATCTCTTCTCGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563183" ref_strand="+" ref_description="SGN-U563183 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|82754667|gb|ABB90081.1| (e_value=7e-147) Ycf2; (*ATH) ATCG00860.1 (e_value=3e-128) | Symbol: YCF2.1 | hypothetical protein | chrC:86474-93358 FORWARD | Aliases: YCF2.1; (*SWP) sp|Q2MIC5|YCF2_SOLBU (e_value=4e-148) Protein ycf2 OS=Solanum bulbocastanum GN=ycf2-A; ">
      <seq>gcgattgggtacgggccccccctcgagaacaagtgggctatttctttgcaaaactgtgctcaatttcatatgtggcaattccgccaagatctcttcgttagttgggggaagaatccgcccgaatcggattttttgaggaacgtatcgagagagaattggatttggttagacaatgtgtggttggtaaacaaggatcggttttttagcaaggtacagaatgtatcgtcaaatattcaatatgattccacaagatctagtttcgttcaagtaacggattctagccaactgaaaggatcttctgatcaatccagagatcatttggattccattagtaatgaggattcggaatatcacacattgattaatcaaagagagattcaacaacgaaaagaaagatcgattctttgggatccttcctttcttcaaacggaacgaaaagagatagaatcaggccgattcccgaaatgcctttctggatattcctcaatgtcccggctattcacggaacgtgagaagcagatgattaatcatctgtttccggaagaaatcgaagaatttcttgggaatcctacaagatccgttcgttcttttttctctgatagatgggcagaacttcatctgggttcgaatcctactgagaggtccactagagatcagaaattgttgaagaaacaacaagatctttcttttgtcccttccaggcgatcggaaaagaaagaaatggttaatatattcaagataattacgtatttacaaaataccgtctcaattcatcctatttcatcagatccggggatgtgatatggttccgaaagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="+" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="35728" stop="37128"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36039" g_stop="36828" g_length="790"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="817" r_length="791" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="+" ref_id="SGN-U563183" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>790</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U563183" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36039" e_stop="36828"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAAGTGGGCTATTTCTTTGCAAAACTGTGCTCAATTTCATATGGGGCAATTCCGCCAAGATCTCTTCGTTAGTTGGGGGAAGAATCTGCCCGAATCGGATTTTTTGAGGAACGTATCGAGAGGGAATTGGATTTGGTTAGACAATGTGTGGTTGGTAAACAAGGATCGGTTTTTTAGCAAGGTACAGAATGTATCGTCAAATATTCAATATGATTCCACAAGATCTAGTTTCGTTCAAGTAACGGATTCTAGCCAACTGAAAGGATCTTCTGATCAATCCAGAGATCATTTGGATTCCATCATTAATGAGGATTCGGAATATCACACATTGATTAATCAAAGAGAGATTCAACAACGAAAAGAAAGATCGATTCTTTGGGATCCTTCCTTTCTTCAAACGGAACGAAAAGAGATAGAATCAGGCCGATCCCCGAAATGCCTTTCTGGATATTCCTCAATGTCCCGGCTATTCACGGAACGTGAGAAGCAGATGATTAATTATCTGTTTCCGGAAGAAATCGAAGAATTTCTTGGGAATCCTACAAGATCCGTTCGTTCTTTTTTCTCTGATAGATGGTCAGAACTTCATCTAGGTTCGAATCCTACTGAGAGGTCCACTAGAGATCAGAAATTGTTGAAGAAACAACAAGATCTTTCTTTTGTCCCTTCTAGGCGATCGGAAAAGAAAGAAATGGTTAATATATTCATGATAATTACGTATTTACAAAATACCATCTCAATTCATCCTATTTCATCAGATCC-GGGATGTGATATGGTTCCGAAGGAT</genome_strand>
        <mrna_strand>GAACAAGTGGGCTATTTCTTTGCAAAACTGTGCTCAATTTCATATGTGGCAATTCCGCCAAGATCTCTTCGTTAGTTGGGGGAAGAATCCGCCCGAATCGGATTTTTTGAGGAACGTATCGAGAGAGAATTGGATTTGGTTAGACAATGTGTGGTTGGTAAACAAGGATCGGTTTTTTAGCAAGGTACAGAATGTATCGTCAAATATTCAATATGATTCCACAAGATCTAGTTTCGTTCAAGTAACGGATTCTAGCCAACTGAAAGGATCTTCTGATCAATCCAGAGATCATTTGGATTCCATTAGTAATGAGGATTCGGAATATCACACATTGATTAATCAAAGAGAGATTCAACAACGAAAAGAAAGATCGATTCTTTGGGATCCTTCCTTTCTTCAAACGGAACGAAAAGAGATAGAATCAGGCCGATTCCCGAAATGCCTTTCTGGATATTCCTCAATGTCCCGGCTATTCACGGAACGTGAGAAGCAGATGATTAATCATCTGTTTCCGGAAGAAATCGAAGAATTTCTTGGGAATCCTACAAGATCCGTTCGTTCTTTTTTCTCTGATAGATGGGCAGAACTTCATCTGGGTTCGAATCCTACTGAGAGGTCCACTAGAGATCAGAAATTGTTGAAGAAACAACAAGATCTTTCTTTTGTCCCTTCCAGGCGATCGGAAAAGAAAGAAATGGTTAATATATTCAAGATAATTACGTATTTACAAAATACCGTCTCAATTCATCCTATTTCATCAGATCCGGGGATGTGATATGGTTCCGAAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586752" ref_strand="+" ref_description="SGN-U586752 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|108773172|ref|YP_635682.1| (e_value=6e-102) Ycf2; (*ATH) ATCG00860.1 (e_value=7e-89) | Symbol: YCF2.1 | hypothetical protein | chrC:86474-93358 FORWARD | Aliases: YCF2.1; (*SWP) sp|Q2MIC5|YCF2_SOLBU (e_value=5e-103) Protein ycf2 OS=Solanum bulbocastanum GN=ycf2-A; ">
      <seq>gtaaatcaaaaaatggatttttgttcaagaatgaaatcttattggaactgtccatatccggttcatccttcggaaccatatcacatcccggatctgatgaaataggatgaattgagacggtattttgtaaatacgtaattatcttgaatatattaaccatttctttcttttccgatcgcctggaagggacaaaagaaagatcttgttgtttcttcaacaatttctgatctctagtggacctctcagtaggattcgaacccagatgaagttctgaccatctatcagagaaaaaagaacgaacggatcttgtaggattcccaagaaattcttcgatttcttccggaaacagatgattaatcatctgcttctcacgttccgtgaatagccgggacattgaggaatatccagaaaggcatttcgggaatcggcctgattctatctcttttcgttccgtttgaagaaaggaaggatcccaaagaatcgatctttcttttcggtgttgaatctctctttgattaatcaatgtgtgatattccgaatcctcattactaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="37191" stop="36040"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36892" g_stop="36340" g_length="553"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="553" r_length="553" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U586752" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U586752" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36892" e_stop="36340"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAATCAAAAAATGGATTTTTGTTCAAGAATGAAATCTTATTGGAACTGCCCATATCCGGTTCATCCTTCGGAACCATATCACATCCCGGATCTGATGAAATAGGATGAATTGAGATGGTATTTTGTAAATACGTAATTATCATGAATATATTAACCATTTCTTTCTTTTCCGATCGCCTAGAAGGGACAAAAGAAAGATCTTGTTGTTTCTTCAACAATTTCTGATCTCTAGTGGACCTCTCAGTAGGATTCGAACCTAGATGAAGTTCTGACCATCTATCAGAGAAAAAAGAACGAACGGATCTTGTAGGATTCCCAAGAAATTCTTCGATTTCTTCCGGAAACAGATAATTAATCATCTGCTTCTCACGTTCCGTGAATAGCCGGGACATTGAGGAATATCCAGAAAGGCATTTCGGGGATCGGCCTGATTCTATCTCTTTTCGTTCCGTTTGAAGAAAGGAAGGATCCCAAAGAATCGATCTTTCTTTTCGTTGTTGAATCTCTCTTTGATTAATCAATGTGTGATATTCCGAATCCTCATTAATGAT</genome_strand>
        <mrna_strand>GTAAATCAAAAAATGGATTTTTGTTCAAGAATGAAATCTTATTGGAACTGTCCATATCCGGTTCATCCTTCGGAACCATATCACATCCCGGATCTGATGAAATAGGATGAATTGAGACGGTATTTTGTAAATACGTAATTATCTTGAATATATTAACCATTTCTTTCTTTTCCGATCGCCTGGAAGGGACAAAAGAAAGATCTTGTTGTTTCTTCAACAATTTCTGATCTCTAGTGGACCTCTCAGTAGGATTCGAACCCAGATGAAGTTCTGACCATCTATCAGAGAAAAAAGAACGAACGGATCTTGTAGGATTCCCAAGAAATTCTTCGATTTCTTCCGGAAACAGATGATTAATCATCTGCTTCTCACGTTCCGTGAATAGCCGGGACATTGAGGAATATCCAGAAAGGCATTTCGGGAATCGGCCTGATTCTATCTCTTTTCGTTCCGTTTGAAGAAAGGAAGGATCCCAAAGAATCGATCTTTCTTTTCGGTGTTGAATCTCTCTTTGATTAATCAATGTGTGATATTCCGAATCCTCATTACTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571569" ref_strand="+" ref_description="SGN-U571569 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|89280678|ref|YP_514895.1| (e_value=0) Ycf2; (*ATH) ATCG00860.1 (e_value=0) | Symbol: YCF2.1 | hypothetical protein | chrC:86474-93358 FORWARD | Aliases: YCF2.1; (*SWP) sp|P61242|YCF2_SOLLC (e_value=0) Protein ycf2 OS=Solanum lycopersicum GN=ycf2-A; ">
      <seq>gaagtgatgtggattattcaagaatcgaagtcgatttgctttataaaaagaagatatcaatgaacttctatgaaatggtttcacgggattcagccaattgtcttgatcgtggaatatcattgagaaataggaatccgggttatcaaaggatttcctgcgattatttctagtatggaatgagtcaatcatccactttggtatcttattgaacaaaaatggtgatattgttcctccattgatcaagaatttcgatttttgggaagtatcatgatcgtccaataagaagggtttcaattttttcaaatgaacaatttgaagacctattgattctaacaactgattgcagagttgatcattcggacctttcaattcttcatagatgtagatctcggacctatgaatggggatatttccgaaactcacacagaaaaaaggaagtgagttagacaaaaataaaagcaacttggacaaaaaaagaagtgacttggacaaaaagaaacgaagtgacttagacaaatcttttttgtcgataacctcagaccaatcaatcgaatattgattaatacgtaatcgatcgaacactacttgaaaacggctcttctgcttcgaaacggactgttccaaatgttcctggaaactcttgctcccattggaccatttgtatctatatgcatcaggatcccgattcatggatctctcggttcgagaaatcaaaataagaggctcgaaccatttcttctgactctttttcaaattcgataaatattggttgatcgtatatttcattatagttctatgattcagagtatcctttcctatttgatccctttgaattccatattcgaagttgcgatcggatctattcattaaaaagaatcgattcaatacatttcttatgtacccataggtactatattggatttgaatcagatttcggatcaatctatattgagtgactgcctccattatgttgttgctagcaaataccactatttttggttttggatcttccaaatcattcccgcaggagatcctgacccatttttttctgatccttcgagaaaaagattcattctcttcataaaaaataggaggtagaaccaataaagatttctttttcgattcatccctggcctcattcaagaattgtttttgatccaatccgcaggaatcaatagaaaaggcaaatcccttatgatacaccagatccggctcggttattgatagagtgaatagatctgccatttcttgaaatctctcttctgatgcaaaatcgtagtgtaacgtgtatcctcccctgttccggtcatggaatagatgaaataatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="38477" stop="36585"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38177" g_stop="36885" g_length="1293"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1329" r_length="1329" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U571569" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>1293</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U571569" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38177" e_stop="36885"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGTGATGTGGATTATTCAAGAATCGAAGTCGATTTGCTTTATAAAAAGAAGATATCAATGAACTTCTATGAAATGGTTTCACGGGATTCAACCAATTGTCTTGATCGTGGAATATCATTGAGAAATAGGAATCCGGGTTATCAAAGGATTTCCTGCGATTATTTCTAGTATGGAATGAGTCAATCATCCACTTTGGTATCTTATTGAACAAAAATGGTGATATTGTTCCTCCATTGATCAAGAATTTCGATTTTTGGGAAGTATCATGATCGTCCAATAAGAAGGGTTTCAATTTTTTCAAATGAACAATTTGAAGACCTATTGATTCTAACAACTGATTGCAGAGTTGATCATTTGGACCTTTCAATTCTTCATAGATGTAGATATCGGACCTATGAATGGGGATATTTCCGAAACTCATACAGAAAAAACGAAGTGAGTTAGACAAAAATAAAAGCAACTTGGACAAAAAAAAGAAGTGACTTGGACAAAAAGAAACGAACTGACTTAGACAAATCTTTTTTGTCGATAACCTCAAACCAATCAATCGAATATTGATTAATACGTAATCGATCGAACACTACTTGAAAACGGCTCTTCTGCTTCGAAACGGACTGTTCCAAATGTTCCTGGAAACTCTTGCTCTCATTGGACCATTTGTATCTATATGCATCAGGATCCCGATTCATGGATCTCTCGGTTCGAGAAATCAAAATAAGAGGCTCGAACCATTTCTTCTG------------A--C----------------TC-T-T-TTTC-----AGTTCTATGATTCAGAGTATCCTTTCCTATTTGATCCCTTTGAATTCCATATTCGAAGTTGCGATCGGATCTATTCATTAAAAAGAATCGATTCAATACATTTCTTATGTACCCATAGGTACTATATTGGATTTGAATCAGATTTCGGATCAATCTATATTGAGTGACTGCCTCCATTATGTTGTTGCTAGCAAATACCACTATTTTTGGTTTTGGATCTTCCAAATCATTCCCGCAGGAGATCCTGACCCATTTTTTTCTGATCCTTCGAGAAAAAGATTCATTCTCTTCATAAAAAATAGGAGGTAGAACCAATAAAGATTTCTTTTTCGATTAATCCCTGGCCTCATTAAAGAATTGTTTTTGATCCAATCCGCAGGAATCAATAGAAAAGGCAAATCCCTTATGATACACCAGATCCAGCTCGGTTATTGATAGAGTGAATAGATCTGCCATTTCTTGAAATCTCTCTTCTGATGCAAAATCGTAGTGTAACGTGTATACTCCCCTGTTCCGGTCATGGAATAGATGAAATAAATCA</genome_strand>
        <mrna_strand>GAAGTGATGTGGATTATTCAAGAATCGAAGTCGATTTGCTTTATAAAAAGAAGATATCAATGAACTTCTATGAAATGGTTTCACGGGATTCAGCCAATTGTCTTGATCGTGGAATATCATTGAGAAATAGGAATCCGGGTTATCAAAGGATTTCCTGCGATTATTTCTAGTATGGAATGAGTCAATCATCCACTTTGGTATCTTATTGAACAAAAATGGTGATATTGTTCCTCCATTGATCAAGAATTTCGATTTTTGGGAAGTATCATGATCGTCCAATAAGAAGGGTTTCAATTTTTTCAAATGAACAATTTGAAGACCTATTGATTCTAACAACTGATTGCAGAGTTGATCATTCGGACCTTTCAATTCTTCATAGATGTAGATCTCGGACCTATGAATGGGGATATTTCCGAAACTCACACAGAAAAAAGGAAGTGAGTTAGACAAAAATAAAAGCAACTTGGAC-AAAAAAAGAAGTGACTTGGACAAAAAGAAACGAAGTGACTTAGACAAATCTTTTTTGTCGATAACCTCAGACCAATCAATCGAATATTGATTAATACGTAATCGATCGAACACTACTTGAAAACGGCTCTTCTGCTTCGAAACGGACTGTTCCAAATGTTCCTGGAAACTCTTGCTCCCATTGGACCATTTGTATCTATATGCATCAGGATCCCGATTCATGGATCTCTCGGTTCGAGAAATCAAAATAAGAGGCTCGAACCATTTCTTCTGACTCTTTTTCAAATTCGATAAATATTGGTTGATCGTATATTTCATTATAGTTCTATGATTCAGAGTATCCTTTCCTATTTGATCCCTTTGAATTCCATATTCGAAGTTGCGATCGGATCTATTCATTAAAAAGAATCGATTCAATACATTTCTTATGTACCCATAGGTACTATATTGGATTTGAATCAGATTTCGGATCAATCTATATTGAGTGACTGCCTCCATTATGTTGTTGCTAGCAAATACCACTATTTTTGGTTTTGGATCTTCCAAATCATTCCCGCAGGAGATCCTGACCCATTTTTTTCTGATCCTTCGAGAAAAAGATTCATTCTCTTCATAAAAAATAGGAGGTAGAACCAATAAAGATTTCTTTTTCGATTCATCCCTGGCCTCATTCAAGAATTGTTTTTGATCCAATCCGCAGGAATCAATAGAAAAGGCAAATCCCTTATGATACACCAGATCCGGCTCGGTTATTGATAGAGTGAATAGATCTGCCATTTCTTGAAATCTCTCTTCTGATGCAAAATCGTAGTGTAACGTGTATCCTCCCCTGTTCCGGTCATGGAATAGATGAAAT-AATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571858" ref_strand="+" ref_description="SGN-U571858 Tomato 200607#2 [13 ESTs aligned] (*GB) gi|89280678|ref|YP_514895.1| (e_value=0) Ycf2; (*ATH) ATCG00860.1 (e_value=0) | Symbol: YCF2.1 | hypothetical protein | chrC:86474-93358 FORWARD | Aliases: YCF2.1; (*SWP) sp|P61242|YCF2_SOLLC (e_value=0) Protein ycf2 OS=Solanum lycopersicum GN=ycf2-A; ">
      <seq>ttcattcgcaacaaaatattttctttgtgcgtcggtaaaaaaaaacatgctttttgggggagagatactatttcaccaatcgagtcacaggtatctaacatattcatacctaacgattttccacaaagtggtgacgaaacgtataacttgtacaaatctttccattttccaagtcgatccgatccattcgttcgtagagctatttactcgatcgcagacatttctggaacacctctaacagaggggcaaatagtcaattttgaaagaacttattgtcaacctctttcagatatgaatctatctgattcagaagggaagaacttgcatcagtatctcaatttcaattcaaacatgggtttgattcacactccatgttctgagaaagatttatcatccgaaaagaggaaaaaatggagtctttgtctaaagaaatgcgttgagaaagggcagacgtatagaacctttcaacgagatagtgctttttcaactctctcaaaatggaatctattccaaacatatatgccatggttccttacttcgacagggtacaaatatctaaatttgatatttttagatactttttcagacctattgccaatactaagtagcagtcaaaaatttgtatccatttttcctgatattatgcatggatcaggtatatcatggcgaattcttcagaaaaaattgtgtcttccacaatggaatctggtaagtgagatctcgagtaagtgtttacataatcttcttctgtccgaagaaatgattcatcgaaataatgagtcaccattgatatcgacacatctgagatcgccaaatgctcgggagttcctctattcaatccttttccttcttcttgttgctggatatctcgttcgtacacatcttctctttgtttcccgggcctctagtgagttacagacagagttcgaaagggtaaaatctttgatgactccatcatctatgattgagttgcgaaaacttctggataggtatcctacatctgaaccgaattctttctggttaaagaatctctttctagttgctctggaacaattaggagattctctagaagaaatacggggttctgcttctggcggcaacatgcttggtcccgcttatggggtcaaatcaatacgttctaagaagaaagattggaatatcaatctcatcgagatcatcgatctcataccaaatcccatcaatcgaatcactttttcgagaaatacgagacatctaagtcatacaagtaaagagatctattcattgataagaaaaagaaaaaacgtgaacggggattggattgatgagaaaatagaatcctgggtcgcgaacagtgattcgattgatgatgaagaaagagaattcttggttcagttctccaccttaacgacagaaaataggattgatcaaattctattgagtctgactcatagtgatcatttatcaaagaatgactctggttatcaaatgattgaacaaccgggagcaaattacttacgatacttagttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="+" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="37971" stop="40077"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38271" g_stop="39777" g_length="1507"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1510" r_length="1510" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="+" ref_id="SGN-U571858" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>1507</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571858" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38271" e_stop="39777"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTTGCAAAAAAATATTTTCTTTGTGCGTCGGTAAAA--AAACATGCTTTTTGGGGGAGAGATACTATTTCACCAATCGAGTCACAGGTATCTAACATATTCATACCTAACGATTTTCCACAAAGTGGTGACGAAACGTATACCTTGTACAAATCTTTCCATTTTCCAAGTCGATCCGATCCATTCGTTCGTAGAGCTATTTACTCAATCGCAGACATTTCTGGAACACCTCTAACAGAGGGGCAAATAGTCAATTTTGAAAGAACTTATTGTCAACCTCTTTCAAATATGAATCTATCTGATTCAGAAGGGAAGAACTTGCATCAGTATCTCAATTTAGGTTAGGACATGGGTTTGATTCACACTACATGTTCTGAGAAAGATTTATCATCCGAAAAGAGGAAAAAATGGAGTCTTTGTCTAAAGAAATGCGTTGAGAAAGGGCAGACGTATAGAACCTTTCAACGAGATAGTGCTTTTTTAACTCTCTCAAAATGGAATCTATTCCAAACATATATGCCATGGTTCCTTACTTCGACAGGGTACAAATATCTAAATTTGATATATTTAGATACTTTTTCAGACCTATTGCCAATACTAAGTAGCAGTCAAAAATTTGTATCCATTTTTCCTGATATTATGCATGGATCAGGTATATCAT-GCGAATTCTTCAGAAAAAATTGTGTCTTCCTCAATGGAATCTGATAAGTGAGATCTCGAGTAGGTGTTTACATAATCTTCTTCTGTCCGAAGAAATGATTCATCGAAATAATGAGTCACCTTTGATATCGACACATCTGAGATCGCCAAATGCTCGGGAGTTCCTCTATTCAATCCTTTTCCTTCTTCTTGTTGCTGGATATCTCGTTCGTACACATCTTCTCTTTGTTTCCAAGGCCTCTAGTGAGTTACAGATAGAGTTCGAAAGGGTAAAATCTTTGATGACTCCATCATCTATGATTGAGTTGCGAAAACTTCTGCATAGGTATCCTACATCTGAACCGAATTCTTTTTGGTTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATACGGGGTTCTGCTTCTGGCGGCAACATGCTTGGTCCCGCTTATGGGGTCAAATCAATACGTTCTAAGAAGAAAGATTGGAATATCAATCTCATCTAGATCATCGATCTCATACCAAATCCCATCAATAGAATCACTTTTTTGAGAAATACGAGACATCTAAGTCATACAAGTAAAGAGATCTATTCATTGATAAGAAAAAGAAAAAACGTGAAAGGGGATTGGATTGATGAGAAAATAGAATCCTGGGTCGCAAACAGTGATTCGATTGATGATGAAGAAAGAGAATTCTTGGTTGAGTTCTCCACCTTAACGACAGAAAATAGGATTGATCAAATTCTATTGAGTCTGACTCATAGTGATCATTTATCAAAGAATGACTCTGTTTATCAAATGATTGAACAACCGGGAGCAATTTACTTACGATACTTACTTG</genome_strand>
        <mrna_strand>TTCATTCGCAACAAAATATTTTCTTTGTGCGTCGGTAAAAAAAAACATGCTTTTTGGGGGAGAGATACTATTTCACCAATCGAGTCACAGGTATCTAACATATTCATACCTAACGATTTTCCACAAAGTGGTGACGAAACGTATAACTTGTACAAATCTTTCCATTTTCCAAGTCGATCCGATCCATTCGTTCGTAGAGCTATTTACTCGATCGCAGACATTTCTGGAACACCTCTAACAGAGGGGCAAATAGTCAATTTTGAAAGAACTTATTGTCAACCTCTTTCAGATATGAATCTATCTGATTCAGAAGGGAAGAACTTGCATCAGTATCTCAATTTCAATTCAAACATGGGTTTGATTCACACTCCATGTTCTGAGAAAGATTTATCATCCGAAAAGAGGAAAAAATGGAGTCTTTGTCTAAAGAAATGCGTTGAGAAAGGGCAGACGTATAGAACCTTTCAACGAGATAGTGCTTTTTCAACTCTCTCAAAATGGAATCTATTCCAAACATATATGCCATGGTTCCTTACTTCGACAGGGTACAAATATCTAAATTTGATATTTTTAGATACTTTTTCAGACCTATTGCCAATACTAAGTAGCAGTCAAAAATTTGTATCCATTTTTCCTGATATTATGCATGGATCAGGTATATCATGGCGAATTCTTCAGAAAAAATTGTGTCTTCCACAATGGAATCTGGTAAGTGAGATCTCGAGTAAGTGTTTACATAATCTTCTTCTGTCCGAAGAAATGATTCATCGAAATAATGAGTCACCATTGATATCGACACATCTGAGATCGCCAAATGCTCGGGAGTTCCTCTATTCAATCCTTTTCCTTCTTCTTGTTGCTGGATATCTCGTTCGTACACATCTTCTCTTTGTTTCCCGGGCCTCTAGTGAGTTACAGACAGAGTTCGAAAGGGTAAAATCTTTGATGACTCCATCATCTATGATTGAGTTGCGAAAACTTCTGGATAGGTATCCTACATCTGAACCGAATTCTTTCTGGTTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATACGGGGTTCTGCTTCTGGCGGCAACATGCTTGGTCCCGCTTATGGGGTCAAATCAATACGTTCTAAGAAGAAAGATTGGAATATCAATCTCATCGAGATCATCGATCTCATACCAAATCCCATCAATCGAATCACTTTTTCGAGAAATACGAGACATCTAAGTCATACAAGTAAAGAGATCTATTCATTGATAAGAAAAAGAAAAAACGTGAACGGGGATTGGATTGATGAGAAAATAGAATCCTGGGTCGCGAACAGTGATTCGATTGATGATGAAGAAAGAGAATTCTTGGTTCAGTTCTCCACCTTAACGACAGAAAATAGGATTGATCAAATTCTATTGAGTCTGACTCATAGTGATCATTTATCAAAGAATGACTCTGGTTATCAAATGATTGAACAACCGGGAGCAAATTACTTACGATACTTAGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576618" ref_strand="+" ref_description="SGN-U576618 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|28261760|ref|NP_783274.1| (e_value=0) Ycf2 [Atropa belladonna]; (*ATH) ATCG00860.1 (e_value=0) | Symbol: YCF2.1 | hypothetical protein | chrC:86474-93358 FORWARD | Aliases: YCF2.1; (*SWP) sp|Q8S8U1|YCF2B_ATRBE (e_value=0) Protein ycf2 B OS=Atropa belladonna GN=ycf2-B; ">
      <seq>cagggaaagatccattagataatgaactattggttctaagccatctctgacgattaatcaacaattcgaagtgcctttcttgcgtattcttgataaaccagcgtttatatatagatgtaggaggatccatttgggaagtaagaagcccctttgacatctcttcatctgcaaataattctcgatgtgaaaacacagagccagggggctgatctttgaataggaaaaagagtggatctgcagggtccaaaatgaattggcttattcgaaaaaggccttgttctttggaagatctatctcgtgtctggtactgcatggttccactctgcaagaaccccgaatcagtctcttgaagctcatccttttcatcataaaggatccgcttgccccgaaatgacctggaccaatagggaaatcccaattcattgggcctttcgatacaatcaaatagaaagccccaagggcgccatattctaggagcccaaactatgtgattgaataaatcctcctgcgggtcaagggctccttctccctccccttcttcaaactccgattcatatttttcatagagaaatctctgatcaaggatagaccaagagcccttttgcatcatatctaagggattcctcggttcgggccgaagaagcaatgtcactcgatcattatcaaactgactgcaatctttttctgtccgtgaagatcccaccagagcgccctctacttctaataggccatgaactagatcagaatcattctcaacgagtccataagaagtgatcccatttttttcatcgggtacggataaagaccaaagatcttgagcgaccgatccggcagaacaactcaaaagataaagaagtatcgttaatctcttcatgctcgttccaagctcgaagtaccatttgtacaaataagaaaccccttcgttacatgatttcttcttcatatagatagatataggatctatggggcaattacttagaagtacattttgtgctacagcccttcctatctgatagaaaaagaacccatgatcctgaaccgatcttacctgggatcgcaaatcccaagtttgtctatgaagaagcgatctaattgtattagtgtctataattgatttcttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="42079" stop="40369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41780" g_stop="40669" g_length="1112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1122" r_length="1122" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U576618" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>1112</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576618" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41780" e_stop="40669"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGGAAAGATCGATTAGATAATGAACTATTGGTTCTAAGCCATCTCTGACGATTAATCAACAATTCGAAGTGCTTTTCTTGCGTATTCTTGATAAACCAGCGTTTATATAGAGATGTAGGAGGATCTCTTTGGGAAGTAAGAAGCCCCTTTTACATCTCTTCATCTGCAAATAATTCTCGATGTGAAAACACAGAGCCAGGGGGCTGATCTTTGAATAGGAAAATGAGTGGATCTGTAGGGTCCCAAATGAATTGGCTTATTCGAAAAAGG-C-----C-TT-G-AGATCTATCTCGTGTCTGGTACTGCATGGTTCCACTCTGCAAGAACCCCGAATCATTCTCTTGAAGCTCATCCTCTTCATCATAAATGATCCGCTTGCCCCGAAATAACCTGGACCAATAGGGAAATCCCAATTCATTGGGCGTTTCGATACAATCAAATACAAAGCCCCAAGGGCGCCATATTCTAGGAGCCCAAACTATGTGATTGAATAAATCCTCTTGCGGGTCGAGGGCTCCTTCTCCCTCCCCTTCTTCAAACTCCGATTCATATTTTTCATAGAGAAATCTCTGATCAAGGATAGACCAAGAGCCCTTTTGCATCATATCTAAGGGATTCCTCGGTTCGGGCCGAAGAAGCAATGTCACTCGATCATTATCAAACTGACTGCAATCTTTTTCTGTCCGTGAAGATCCCACCAGAGCGCCCTCTACTTCTAATAGGCCATGAACTAGATCAGAATCATTCTCAACGAATCCATAAGAAGTGATCCCATTTTTTTCATCGGGTACAGATAAAGACCAAAGATCTTGAGCGACCGATCCGGCAGAACAACTCAAAAGATAAAGAAGTATCGTTAATCTCTTCATGCTCGTTCCAAGCTCGAAGTACCATTTGCACAAATAAGAATCCCCTTCGTTACATGATTTCTTCTTTATATAGATAGATATAGGATCTATAGGGCAATTACTTAGAAGTACATTTTGTGCTACAGCCCTTCCTATCCGATAGAAACGGATCCCATGATCCTGAACCGATCTTACCTGGGATCACAAATCCCAAG-TTGTCTATGAAGAGCGGATCTAATTGTATTAGTGTCTATAATTGATTTCTTCT</genome_strand>
        <mrna_strand>CAGGGAAAGATCCATTAGATAATGAACTATTGGTTCTAAGCCATCTCTGACGATTAATCAACAATTCGAAGTGCCTTTCTTGCGTATTCTTGATAAACCAGCGTTTATATATAGATGTAGGAGGATCCATTTGGGAAGTAAGAAGCCCCTTTGACATCTCTTCATCTGCAAATAATTCTCGATGTGAAAACACAGAGCCAGGGGGCTGATCTTTGAATAGGAAAAAGAGTGGATCTGCAGGGTCCAAAATGAATTGGCTTATTCGAAAAAGGCCTTGTTCTTTGGAAGATCTATCTCGTGTCTGGTACTGCATGGTTCCACTCTGCAAGAACCCCGAATCAGTCTCTTGAAGCTCATCCTTTTCATCATAAAGGATCCGCTTGCCCCGAAATGACCTGGACCAATAGGGAAATCCCAATTCATTGGGCCTTTCGATACAATCAAATAGAAAGCCCCAAGGGCGCCATATTCTAGGAGCCCAAACTATGTGATTGAATAAATCCTCCTGCGGGTCAAGGGCTCCTTCTCCCTCCCCTTCTTCAAACTCCGATTCATATTTTTCATAGAGAAATCTCTGATCAAGGATAGACCAAGAGCCCTTTTGCATCATATCTAAGGGATTCCTCGGTTCGGGCCGAAGAAGCAATGTCACTCGATCATTATCAAACTGACTGCAATCTTTTTCTGTCCGTGAAGATCCCACCAGAGCGCCCTCTACTTCTAATAGGCCATGAACTAGATCAGAATCATTCTCAACGAGTCCATAAGAAGTGATCCCATTTTTTTCATCGGGTACGGATAAAGACCAAAGATCTTGAGCGACCGATCCGGCAGAACAACTCAAAAGATAAAGAAGTATCGTTAATCTCTTCATGCTCGTTCCAAGCTCGAAGTACCATTTGTACAAATAAGAAACCCCTTCGTTACATGATTTCTTCTTCATATAGATAGATATAGGATCTATGGGGCAATTACTTAGAAGTACATTTTGTGCTACAGCCCTTCCTATCTGATAGAAAAAGAACCCATGATCCTGAACCGATCTTACCTGGGATCGCAAATCCCAAGTTTGTCTATGAAGAAGCGATCTAATTGTATTAGTGTCTATAATTGATTTCTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566453" ref_strand="+" ref_description="SGN-U566453 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|11873|emb|CAA77388.1| (e_value=2e-25) hypothetical; ">
      <seq>tcctggaattggaagaaattcggcagcggatcgcgaaatcctggtgatcttctctatctaatgaatggggagtcctctttaaaatcgtccgcccgtaacccagcagataaagtacattacatagtccagggattggcgacttacccattcagtgactttggcactggacgttcccaaaatggggactatcgggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="42756" stop="41963"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42456" g_stop="42265" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U566453" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>192</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566453" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42456" e_stop="42265"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTGGAATTGGAAGAAATTCGGCAGCGGATCGCGAAATCCTGGTGATCTTCTCTATCTAATGAATGGGGAGTCCTCTTTAAAATCGTCCGCCCGTAACCCAACAGATAAAGTACATTACATAGTCCAGGGATTGGCGACTTACCCATTCAGTGACTTTGGCACTGGACGTTCCCAAAATGGGGACTATCGG</genome_strand>
        <mrna_strand>TCCTGGAATTGGAAGAAATTCGGCAGCGGATCGCGAAATCCTGGTGATCTTCTCTATCTAATGAATGGGGAGTCCTCTTTAAAATCGTCCGCCCGTAACCCAGCAGATAAAGTACATTACATAGTCCAGGGATTGGCGACTTACCCATTCAGTGACTTTGGCACTGGACGTTCCCAAAATGGGGACTATCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586406" ref_strand="+" ref_description="SGN-U586406 Tomato 200607#2 [10 ESTs aligned] ">
      <seq>aaaatctcttgttaattataattgtttatcatgtttgaataatgttataataaccatctttagaaagtttgctacagaaatattcttcgaataagtatgcccagactatgccatcctaaggttgaaaccggtaggcagagaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="+" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="45588" stop="46331"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45888" g_stop="46031" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="+" ref_id="SGN-U586406" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>144</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U586406" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45888" e_stop="46031"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCTCTTGTTAATTATAATTATTTATCATGTTTGAATAATGTTATAATAACCATCTTTAGAAAGTTTGCTACAGAAATATTCTTCGAATAAGTATGCCCAAACTATGTCATCCTAAGGTTTAAACCGGTAGGCAGAGAAGG</genome_strand>
        <mrna_strand>AAAATCTCTTGTTAATTATAATTGTTTATCATGTTTGAATAATGTTATAATAACCATCTTTAGAAAGTTTGCTACAGAAATATTCTTCGAATAAGTATGCCCAGACTATGCCATCCTAAGGTTGAAACCGGTAGGCAGAGAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589636" ref_strand="+" ref_description="SGN-U589636 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|18450265|ref|NP_569140.1| (e_value=4e-66) putative cell-to-cell movement protein [tobacco vein-clearing virus]; (*SWP) sp|Q01089|MOVP_CAMVW (e_value=2e-16) Movement protein OS=Cauliflower mosaic virus (strain W260) GN=ORF I; ">
      <seq>ggatattatataaaaaaataataaaataaaaagaccatatagaccaaaaagaaaaatattccaatgtacttgttataattgcggaaagataggacatttagctagagattgtaaactacccaaagatccgaaaatgaagcaaattgcagaagtaattatagataatcataaatatatgcaaatagaatacatagactatgaattaagtgaagacgatagtatatatgaagtatcagatatagaaactgaaaatgaagaagaaaatattaatctagataataatgaaacagatgaagaaatataatgtctgaagatgagataaaaataatatctaaagaagattatcaaaatgaagaattatcagactaaaaaattatatttgataatacaatttttgaacaaataaaaggaaaagaattagacttaagtgttgaaaaagtacttgaaatacctactctatgaaattggtttaaaagacaaaaagaagaatattatgtagttagtcaaaaagaacatattatagattgtaaatatgcaagaggaaaaacatatatacctatactaagtaaacgaataataaataaagaaatacaagatataaaagctaaaacaccaataaaatatgtacatttaggaggaacagaaatattaataaaagcttgttttagagaaggaatagatacacctattgaaatatacttagcagatgatagaattatacaccctatagaaaaaagtgtaattagtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="+" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="48157" stop="49503"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48456" g_stop="49203" g_length="748"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="749" r_length="749" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="+" ref_id="SGN-U589636" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>748</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589636" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48456" e_stop="49203"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTATTATGT-AAAAAATCATAAAATAAAAAGACCTTACATACCAAAAAGAAAAATATCCCAATGTACTTGTTATAATTGTGGAAAGATAGGACACATAGCTAAAGATTGTAAATTACCCAAAAATCCAAAAAGAAAACAAATAGCAGAATTAATTATAGACAATGAAAAATATATGCAAATAGAGTACATAGATTATGAATTAAGTGAAAATGATAGTATATATGAAGTATCAGACATAGAAACTGAGAATGAAGAAGAAAATATTAACATAGATAACAACGAAAAAGATGAAGAATTATAATGTCTGAAAATGAAATAAAAATAATATCTAAGGAAGAATATCAAGATGAGGAATCATCATAACAGAAAATTATATTTGATAATACGATATTTGAACAAATAAAAGGAAAAGAATTAGATTTAAGTGTTGAAAAAGTACTAGAAATACCTATTTTAAGAAATTGGTTTAAAAGACAAAAAGAAGAATACTATATAGTTAGTCAAAAAGAACATATCATAGATTGTAAATACACAAGAGGAAAAGCATTTATACCTATAATAAATAAAAGAATGATAAACAAAGAAATACAAGATATAAAAGCTAAAACACCAATAAAATATGTACATTTAGGAGGAACAGAAATATTAATAAAAGCCTGCTTTAGAGAAGGAATAGATACACCTATAGAAATATATTTAGCAGATGATAGAATTGTACACCCTATAGAAAAAAGCATAATTAGTGC</genome_strand>
        <mrna_strand>GGATATTATATAAAAAAATAATAAAATAAAAAGACCATATAGACCAAAAAGAAAAATATTCCAATGTACTTGTTATAATTGCGGAAAGATAGGACATTTAGCTAGAGATTGTAAACTACCCAAAGATCCGAAAATGAAGCAAATTGCAGAAGTAATTATAGATAATCATAAATATATGCAAATAGAATACATAGACTATGAATTAAGTGAAGACGATAGTATATATGAAGTATCAGATATAGAAACTGAAAATGAAGAAGAAAATATTAATCTAGATAATAATGAAACAGATGAAGAAATATAATGTCTGAAGATGAGATAAAAATAATATCTAAAGAAGATTATCAAAATGAAGAATTATCAGACTAAAAAATTATATTTGATAATACAATTTTTGAACAAATAAAAGGAAAAGAATTAGACTTAAGTGTTGAAAAAGTACTTGAAATACCTACTCTATGAAATTGGTTTAAAAGACAAAAAGAAGAATATTATGTAGTTAGTCAAAAAGAACATATTATAGATTGTAAATATGCAAGAGGAAAAACATATATACCTATACTAAGTAAACGAATAATAAATAAAGAAATACAAGATATAAAAGCTAAAACACCAATAAAATATGTACATTTAGGAGGAACAGAAATATTAATAAAAGCTTGTTTTAGAGAAGGAATAGATACACCTATTGAAATATACTTAGCAGATGATAGAATTATACACCCTATAGAAAAAAGTGTAATTAGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570769" ref_strand="+" ref_description="SGN-U570769 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|82754279|gb|ABB89938.1| (e_value=6e-120) putative; ">
      <seq>gctacgtcgttcggcagacggtaaaaagccagaactagaaggagacgttgggaaactccataaaacccatgacaatgtttgtttaaatgcagctacagcaagcacgtctacaacaaaaggagctagtggaataagatatacaaatttaaatatgaacaaaatcttcgataaaccatttattccaaagaaccaaaaagactcattatttataccaccgcaaatacatacttactcagaaagtttaaaacaagataaaaaagcctacaaccacataacccgctcatatattgaaaacctttataaaatccaaaattatttaaactcaacacctagatctccaactaccaaaaaccctaacactgattttataacccaaaagctacaagggatataataagttaatagcacaaccgggcaccaatgcaaatctagtaaaaacatgttatagttatggattacttaatacagtttatacccaaacaggagatgaaatatctaccataccagagctatacaaagcctttatgaactataaaagaattactaaaggaacattgttttatataaagttttattcagcaccagcagagatattatttgatgagataaaaccaattatacaagttataaaaattggtttgaccagagatatgataattccagaagatatcggaatacaacaagaaatacaaaagattgagataccagaattctacgccaacaaaagagttataggaatagcaactatcctaaataaactaactaacaattatttaaacggaaactcagtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="+" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="51728" stop="53118"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52028" g_stop="52818" g_length="791"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="792" r_length="792" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="+" ref_id="SGN-U570769" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>791</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U570769" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52028" e_stop="52818"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTACGTCGTTCGGCGGACGGTAAAAAGCCAGAACTAGAAGGAGACGTTGGGAAACATTATAAAACCCATGACAATGTTTGTTTAAATGCAGCTACAGCAAGCACATCTACAACAAAAGGAGCCAGTGGAATAAGATATACAAATTTAAATATGAACAAAATCTTCGATAAACCATTTATTCCAAAGAACCAAAAAGACTCATTATTTATACCACCACAAATACATACTTACTCAGAAAGTTTAAACCACGATAAAAAAGCCTACAACCACATAACCCGCTCATATATTGAAAACCTTTATAAAATACAAAATTATTTAAACTCAACACCTAGATCTCCAACTACCAAAGACCCTAATACTGATTTTATAACCCAAAAGCTACAA-GGATATAATAAGTTAATAGCACAACCAGGCACCAATGCAAATCTAGTAAAAACATGTTATAGTTATGGATTACTTAATACAGTTTATACCCAAACAGGAGATGAAATATCTACCATACCAGAGCTATACAAAGCCTTTATGAACTATAAAAGAATTACTAAAGGAACATTGTTTTATATAAAGTTTTATTCAGCACCAGCAGAGATATTATTTGATGAGATAAAACCAATTATACAAGTTATAAAAATTGGTTTGACCAGAGATATGATAATTCCAGAAGATATCAGAATACAACAAGAAATACAAAAGATTGAGATACCAGAATTCTACGCCAACAAAAGAGTTATAGGAATAGCAACTATCCTAAATGAACTAACTAACAATTATTTAAACGGAAATTCAGTAT</genome_strand>
        <mrna_strand>GCTACGTCGTTCGGCAGACGGTAAAAAGCCAGAACTAGAAGGAGACGTTGGGAAACTCCATAAAACCCATGACAATGTTTGTTTAAATGCAGCTACAGCAAGCACGTCTACAACAAAAGGAGCTAGTGGAATAAGATATACAAATTTAAATATGAACAAAATCTTCGATAAACCATTTATTCCAAAGAACCAAAAAGACTCATTATTTATACCACCGCAAATACATACTTACTCAGAAAGTTTAAAACAAGATAAAAAAGCCTACAACCACATAACCCGCTCATATATTGAAAACCTTTATAAAATCCAAAATTATTTAAACTCAACACCTAGATCTCCAACTACCAAAAACCCTAACACTGATTTTATAACCCAAAAGCTACAAGGGATATAATAAGTTAATAGCACAACCGGGCACCAATGCAAATCTAGTAAAAACATGTTATAGTTATGGATTACTTAATACAGTTTATACCCAAACAGGAGATGAAATATCTACCATACCAGAGCTATACAAAGCCTTTATGAACTATAAAAGAATTACTAAAGGAACATTGTTTTATATAAAGTTTTATTCAGCACCAGCAGAGATATTATTTGATGAGATAAAACCAATTATACAAGTTATAAAAATTGGTTTGACCAGAGATATGATAATTCCAGAAGATATCGGAATACAACAAGAAATACAAAAGATTGAGATACCAGAATTCTACGCCAACAAAAGAGTTATAGGAATAGCAACTATCCTAAATAAACTAACTAACAATTATTTAAACGGAAACTCAGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U572618" ref_strand="+" ref_description="SGN-U572618 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|81176251|ref|YP_398330.1| (e_value=1e-41) photosystem; (*ATH) ATCG00360.1 (e_value=1e-40) | Symbol: YCF3 | hypothetical protein | chrC:42584-43751 REVERSE | Aliases: YCF3; (*SWP) sp|Q8S8X3|YCF3_ATRBE (e_value=1e-39) Photosystem I assembly protein ycf3 OS=Atropa belladonna GN=ycf3; ">
      <seq>gggtatagaggagatagtcgcacgtaatgacagatcacggccatattattaaaagcttgtggtaagaatgggtttcgttctagtgctcgaaaataatattccaaagctttcgtatgttctccattacttgtgtggataagccctatattatagagtatataacttcgatcatagggatcaatttctagtcgcatagcttcataataattctgcaaagcttccgcgtaatttccttcggattgagccgacatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="+" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="54194" stop="55043"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54491" g_stop="54743" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="+" ref_id="SGN-U572618" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>253</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U572618" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54491" e_stop="54743"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTATAGTGGAGATAGTCACACGTAATGACACATCACGGCCATATTATTAAAATCTTGTTGTAAGAATGGGTTTCGTTCTAGTGCTCGAAAATAATATTCCAAAGCTTTCGTATGTTCTCCATTACTTGTGTGGATAAGCCCTATATTATAGAGTATATAACTTCGATCATAGGGATCAATTTCTAGTCGCATAGCTTCATAATAATTCTGCAAAGCTTCCGCATAATTTCCTTCGGATTGAGCCGACATCC</genome_strand>
        <mrna_strand>GGGTATAGAGGAGATAGTCGCACGTAATGACAGATCACGGCCATATTATTAAAAGCTTGTGGTAAGAATGGGTTTCGTTCTAGTGCTCGAAAATAATATTCCAAAGCTTTCGTATGTTCTCCATTACTTGTGTGGATAAGCCCTATATTATAGAGTATATAACTTCGATCATAGGGATCAATTTCTAGTCGCATAGCTTCATAATAATTCTGCAAAGCTTCCGCGTAATTTCCTTCGGATTGAGCCGACATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563384" ref_strand="+" ref_description="SGN-U563384 Tomato 200607#2 [44 ESTs aligned] (*GB) gi|89280637|ref|YP_514854.1| (e_value=1e-108) ribosomal; (*ATH) ATCG00380.1 (e_value=2e-94) | Symbol: RPS4 | Chloroplast encoded ribosomal protein S4 | chrC:45223-45828 REVERSE | Aliases: RPS4; (*SWP) sp|Q2MI98|RR4_SOLLC (e_value=6e-110) 30S ribosomal protein S4, chloroplastic OS=Solanum lycopersicum GN=rps4; ">
      <seq>ctcctctttgattttattaactatcttctataggagaccctttttttgtccaatcaaaaatgattttatcatttcggaatccgcaattcaatatagatggatatatacccgatctatatgtctcgcttcctgtcattttgccattcaatttggaatacttgaacgatcgattcttgttttttatcttcactttcccctgaaagccgaggaatgtctcattagttataactaaccattccattaaacaattagaatttgaaataaatatagaatgagagatatatataatatagaatataatatacaaatatagaatataatatagaactgtaataaaaagtatttcaaatgccaaaaaaagaaatgaaaaaaaaaaagaatatttaccattcaattcaaattgaaaatcaaagaatattaacaatatttacaatcactatttaataatattagtattagaattgtgataaatcgaaattctagatcgctatattaatccttatgctctagaatattcaatagaatattgactagttaataactaagattccaattccagtagtttagtcaattactatgcatataagatttctgtgatgtgggcccgcttagctcagaggttagagcatcgcatttgtaatgcgatggtcatcggttcgattccgatagccggcttttccctattttttttttcattttttagatgattgataatgttcctttgaaatcaaagaatattgaaattgcgccttcctccttttccaaaagctatcaatttattataggaacttccaattatgtcagcaaagaattatatatatataatagaaggggttctgtatatttatctaattcatcccattcttcttttctttatagtatttatagtacaagtacactatttcagtaaacttcgcttcatttagttcagtttagttttagtttaggtttattctgtaaaataaaattcaataaaaaaaaaatagaaataagaattcattcgaaatactaaataagaataaggagtctttatgtcgcgttaccgaggacctcgtttcaaaaaaatacgacgcctgggggctttaccaggactaactaataaaaagcctaggaccggaagtgatcttagaaaccaatcgcgttccggtaaaaaatctcaatatcgtattcgtctagaagaaaaacaaaaattgcgttttcattatggtcttacagaacgacaattacttaaatacgttcgtatcgccagaaaagccaaggggtcaacaggtcaagttttactacaattacttgaaatgcgtttggataacatcctttttcgattgggtatggcttccactattcccgcagcccgtcaattagttaaccatcgacatattttagttaatggtcatatagtagatataccgagttatcgctgcaaaccccgagatattattacggcaaaggatgaacaaaaatccagagctctgattcaaatttctctcgattcatcccctcatgaggaattaccaaatcatttgacccttcagccattccaatataaaggattagtcaatcaaataatagatagtaaatgggtcggtttgaaaataaatgaattgctagtcgtagaatattattctcgtcagacttaaacctcagacttaaaccaagggttcgcaaaaatttcttccctttaggcgaagtaaattaacccaaggttaagtaagttaagtaagatcaatccgagtttgatctagatttcccccatttttgtatcatagaccaaggatctattttcattccttgtctattcttttctttccagtattttgattatgattatttttgagtattctattttacgcgtcacagcaattaggaattgagaatctatatctttagatcaaagaagggtctagctgttggaataatggtatacaatgctatttgagtccttgttgttagtaaaattggtgaattaagcgaaggtacggaaagagagggattcgaaccctcggtaaacaaaagcctacatagcagttccaatgctacgccttgaaccactcggccatctctcctacataatgattatgaccccaaaaccgagtgaatagcgagtcagtcataatccatattccattattggataggtacgaccaatccattttaactgaaaatttgtcatcaaagtcaaagcaaagaacggtttttctttccttcgaggctccgggataaagatacaatttttacgaaaaattgttcaaaaaaattcaattcatgtttgcaaaaacaacgttcccttctttttctgatatttttctatttttataacggattaattcaatgaattagaacgaatcaactgattgatggtctatatcttttagactatagttaatggatactcttaaatcataactgtaattataattatatagactatgattccataccagaaaattttttttaattccttttcggttttggagttctcaacaacaaatacctacccctctattagaatagaaattcatcaaaaatttagattcgattgtatagtgtatacccgttatgtacacaaaattggcagttattctattttcatcatagaatgattagtcgatcttttttcttctttgtaatttgtatcatgattcaatcaaaatttctcgagttcttctaatttgtaacttcaccgaaatcggaatagttcctatactactacattagtatgaaatcgaatcgcgttgaaatatttcttatttcttatttcttctcgattcctgtcaaaaaggaacaattggaatagaggattcatatcttttgtttttttgttaaaaaaaagaagtttttatgttatttcgtactatacaattcttttctttgtgggatctttttcccacgagaggtaatgaaaagaattctagaatggattgctacctatgcctagatcacggataaatggaaattttattgataagaccttttcaattgtagccgatatcttattacgagtaattccgacaacttccggagaaaaagaggcatttacctattacagagatggtgcgatttgattctttttttttttgattttatatttattcatttttctcagtcttacgaggagaaaaacacatgattcgagaaaaaaaatctacgctttttgaaggtgaagtttggaaatagaacaattccttctgtcgtgtatcctcgattaatgcaacctcagatgctatgtttcaattatagattctagtattaagcgaaaggttacgcctagaggttctgtattacgggtcaatcctactctactagcgctaataggcagcataggggaagaagcgctacacctaggaatcaacaacacgaaaactttgttctaagtcagcccttttcttagcgggcttgggactaaaagaatggttgggacaacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="58794" stop="54800"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58494" g_stop="55100" g_length="3395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="3424" r_length="3424" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U563384" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>3395</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563384" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58494" e_stop="55100"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCTCTTTGATTTTATTAACTATCTTCTATAGGAGACCCTTTTTTTGTCCAGTCAAAAATGATTTTATCATTTCGGAATCTGCAATTCAATATAGATTGATATATACCCGATCTATATGTCTTGCTTCCTGTCATTTTGCCATTCAATTTTGAATACTTGAACGATCGATTCTTGTTTTTTATCTTCACTTTCCCCTGAAAGCCGAGGAATGTCTCATTAGTTATAACTAACCATTGCATTAAACAATTAGAATTTGAAATAAATATAGAAT--GAG-----------AT---ATAT-ATAT---AATATAGAATATAATATAGAACTGTAATAAAAAGTATTTCAAATGCCAAAAAAAGAAATG-AAAAAAAAAAGAATATTTACCATTCAATTCAAATTGAAAATCAAAGAATATTAACAATATTTACAATCACTATTTAATAATATTAGTATTAGAATTGTGATAAATCGAAATTCTAGATCGCTATATTAATCCTTATGCTCTAGAATATTCAATAGAATATTGACTAGTTAATAACTAAGATTCCAATTCCAGTAGTTTAGTCAATTACTATGCATATAAGATTTCTGTGATGTGGGCCCGCTTAGCTCAGAGGTTAGAGCATCGCATTTGTAATGCGATGGTCATCGGTTCGATTCCGATAGCCGGCTTTTCCC--CTTTTTTTTTCATTTTTTAGATGATTGATAATGTTCCTTTGAAATCAAAGAATATTGAAATTGCGCCTTCCTCCTTTTCCAAAAGCTATCAATTTATTATAGGAACTTCCAATTATGTCAGCAAAGAATTATATATATATAATAGAAGGGGTTCTGTATATTTATCTAATTCATCCCATTCTTCTTTTCTTTATAGTATTTATAGTACAAGTACACTATTTCAGTAAACTTCGCTTCATTTAGTTCAGTTTAGTTTTAGTTTAGGTTTATTCTGTAAAATAAAATTCAAT---AAAAAAATAGAAATAAGAATTCATTCAAAATACTAAATAAGAATAAGGAGTCTTTATGTCGCGTTACCGAGGACCTCGTTTCAAAAAAATACGACGCCTGGGGGCTTTACCAGGACTAACTAATAAAAAGCCTAGGACCGGAAGTGATCTTAGAAACCAATCGCGTTCCAGTAAAAAATCTCAATATCGTATTCGTCTAGAAGAAAAACAAAAATTGTGTTTTCATTATGGTCTTACAGAACGACAATTACTTAAATACGTTCGTATCGCCAGAAAAGCCAAGGGGTCAACAGGTCAAGTTTTACTACAATTACTTGAAATGCGTTTGGATAACATCCTTTTTCGATTCGGTATGGCTTCCACTATTCCCGCAGCCCGTCAATTAGTTAACCATCGACATATTTTAGTTAATGGTCATATAGTAGATATACCGAGTTATCGCTGCAAACCCCGAGATATTATTACGGCTAAGGATGAACAAAAATCCAGAGTTCTGATTCAAATTTCTCTCGATTCATCCCCTCATGAGAAGTTACCAAATCATTTGACCCTTCAGCCATTCCAATATAAAGGATTAGTCAATCAAATAATAGATAGCAAATGGGTTGGTTTGAAAATAAATAAATTGCTAGTCGTAGAATATTATTCTCGTCAGACTTAAACCTCAGACTTAAACCAAGGGTTCGCAAAAATTTCTTCCCTTTAGGCGAAGTAAATTAACCCAAGGTTAAGTAAGTTAAGTAAGATCAATCCGAGTTTGATCTAGATTTCCCCCATTTTTGTATCATAGACCAAGGATCTATTTTCATTCCTTGTCTATTCTTTTCTTTCCAGTATTTTGATTATGATTATTTTTGAGTATTCTATTTTACGCGTCACAGCAATTAGGAATTGAGAATCTATATCTTTAGATCAAAGAAGGGTCTAGCTGTTTGAATAATGGTATACAATGCTATTTGAGTCCTTGTTGTTAGTAAAATTGGTGAATTAAGCGAAGGTACGGAAAGAGAGGGATTCGAACCCTCGGTAAACAAAAGCCTACATAGCAGTTCCAATGCTACGCCTTGAACCACTCGGCCATCTCTCCTACATAATGATTATGACCCCAAAACCGAGTGAATAGCGAGTCAGTCATAATCCATATTCCATTATTTGATAGGTACGACCAATCCATTTTAACTGAAAATTTGTCATCAAAGTCAAAGCAAAGAACGGTTTTTCTTTCCTTCGAGGCTCCGGGATAAAGATACAATTTTTACGAAAAATTGTTCAAAAAAATTCAATTCATGTTTGCAAAAACAACGTTCCCTTCTTTTTCTGATATTTTTCTATTTTTATAACGGATTAATTCAATGAATTAGAACGAATCAACTAATTGATGGTCTATATCTTTTAGACTATAGTTAATGGATACTCTTAAATGATAACTGTAATTATAATTATATAGACTATGATTCCATACCAGAAAA-TTTTTTTAATTCCTTTTTGGTTTTGGAGTTCTCAACAACAAATACCTACCCCTCTATTAGAATAGAAATTCATCAAAAATTTAGATTCGATTGTATAGTGTATACCCGTTATGTACACAAAATTGGCAGTTATTCTATTTTCATCATAGAATGATTAGTCGATCTTTTTTCTTCTTTGTAATTTGTATCATGATTCAATCAAAATTTCTCGAGTTCTTCTAATTTGTAACTTCACCAAAATCAGAATAGTTCCTATACTACTACATTAGTATGAAATCGAATCGCGTTGAAATATTTCTTATTTCTTATTTCTTCTCGATTCCTGTCAAAAAGGAACAATTGGAATAGAGGATTCATATCTTTTGTTTTTTTGTTAAAAAAAAGAAGTTTTTATGTTATTCCGTATTATACAATTCTTTTCTTTGTGGGATCTTTTTCCCACGAGAGGTAATGAAAAGAATTCTAGAATGGATTGCTACCTATGCCTAGATCACGGATAAATGGAAATTTTATTGATAAGACCTTTTCAATTGTAGCCGATATCTTATTACGAGTAATTCCGACAACTTCCGGAGAAAAAGAGGCATTTACCTATTACAGAGATGGTGCGATTTGATTC--TTTTTTTTTGATTTTATATTTATTCATTTCTCTCAGTCTTACGAGGAGAAAAATACATGATTCGAGAAAAGAAATCTACGCTTTTTGAAGGTGAAGTTTGGAAATAGAACAATTCCTTCTGTCGTGTATCCTCGATTAATGCAACCTCAGATGCTATGTTTCAATTATAGATTCTAGTATTAAGCGAAAGGTTACGCCTAGAGGTTCTGTATTACGGGTCAATCCTACTCTACTAGCGCTAATAGGCAGCATAGGGGAAGAAGCGCTACACCTAGGAATCAACAACACGAAAACTTTGTTCTAAGTCAGCCCTTTTCTTAGCGGGCTTGGGACTAAAAGAATGGTTGGGACAACAAA</genome_strand>
        <mrna_strand>CTCCTCTTTGATTTTATTAACTATCTTCTATAGGAGACCCTTTTTTTGTCCAATCAAAAATGATTTTATCATTTCGGAATCCGCAATTCAATATAGATGGATATATACCCGATCTATATGTCTCGCTTCCTGTCATTTTGCCATTCAATTTGGAATACTTGAACGATCGATTCTTGTTTTTTATCTTCACTTTCCCCTGAAAGCCGAGGAATGTCTCATTAGTTATAACTAACCATTCCATTAAACAATTAGAATTTGAAATAAATATAGAATGAGAGATATATATAATATAGAATATAATATACAAATATAGAATATAATATAGAACTGTAATAAAAAGTATTTCAAATGCCAAAAAAAGAAATGAAAAAAAAAAAGAATATTTACCATTCAATTCAAATTGAAAATCAAAGAATATTAACAATATTTACAATCACTATTTAATAATATTAGTATTAGAATTGTGATAAATCGAAATTCTAGATCGCTATATTAATCCTTATGCTCTAGAATATTCAATAGAATATTGACTAGTTAATAACTAAGATTCCAATTCCAGTAGTTTAGTCAATTACTATGCATATAAGATTTCTGTGATGTGGGCCCGCTTAGCTCAGAGGTTAGAGCATCGCATTTGTAATGCGATGGTCATCGGTTCGATTCCGATAGCCGGCTTTTCCCTATTTTTTTTTTCATTTTTTAGATGATTGATAATGTTCCTTTGAAATCAAAGAATATTGAAATTGCGCCTTCCTCCTTTTCCAAAAGCTATCAATTTATTATAGGAACTTCCAATTATGTCAGCAAAGAATTATATATATATAATAGAAGGGGTTCTGTATATTTATCTAATTCATCCCATTCTTCTTTTCTTTATAGTATTTATAGTACAAGTACACTATTTCAGTAAACTTCGCTTCATTTAGTTCAGTTTAGTTTTAGTTTAGGTTTATTCTGTAAAATAAAATTCAATAAAAAAAAAATAGAAATAAGAATTCATTCGAAATACTAAATAAGAATAAGGAGTCTTTATGTCGCGTTACCGAGGACCTCGTTTCAAAAAAATACGACGCCTGGGGGCTTTACCAGGACTAACTAATAAAAAGCCTAGGACCGGAAGTGATCTTAGAAACCAATCGCGTTCCGGTAAAAAATCTCAATATCGTATTCGTCTAGAAGAAAAACAAAAATTGCGTTTTCATTATGGTCTTACAGAACGACAATTACTTAAATACGTTCGTATCGCCAGAAAAGCCAAGGGGTCAACAGGTCAAGTTTTACTACAATTACTTGAAATGCGTTTGGATAACATCCTTTTTCGATTGGGTATGGCTTCCACTATTCCCGCAGCCCGTCAATTAGTTAACCATCGACATATTTTAGTTAATGGTCATATAGTAGATATACCGAGTTATCGCTGCAAACCCCGAGATATTATTACGGCAAAGGATGAACAAAAATCCAGAGCTCTGATTCAAATTTCTCTCGATTCATCCCCTCATGAGGAATTACCAAATCATTTGACCCTTCAGCCATTCCAATATAAAGGATTAGTCAATCAAATAATAGATAGTAAATGGGTCGGTTTGAAAATAAATGAATTGCTAGTCGTAGAATATTATTCTCGTCAGACTTAAACCTCAGACTTAAACCAAGGGTTCGCAAAAATTTCTTCCCTTTAGGCGAAGTAAATTAACCCAAGGTTAAGTAAGTTAAGTAAGATCAATCCGAGTTTGATCTAGATTTCCCCCATTTTTGTATCATAGACCAAGGATCTATTTTCATTCCTTGTCTATTCTTTTCTTTCCAGTATTTTGATTATGATTATTTTTGAGTATTCTATTTTACGCGTCACAGCAATTAGGAATTGAGAATCTATATCTTTAGATCAAAGAAGGGTCTAGCTGTTGGAATAATGGTATACAATGCTATTTGAGTCCTTGTTGTTAGTAAAATTGGTGAATTAAGCGAAGGTACGGAAAGAGAGGGATTCGAACCCTCGGTAAACAAAAGCCTACATAGCAGTTCCAATGCTACGCCTTGAACCACTCGGCCATCTCTCCTACATAATGATTATGACCCCAAAACCGAGTGAATAGCGAGTCAGTCATAATCCATATTCCATTATTGGATAGGTACGACCAATCCATTTTAACTGAAAATTTGTCATCAAAGTCAAAGCAAAGAACGGTTTTTCTTTCCTTCGAGGCTCCGGGATAAAGATACAATTTTTACGAAAAATTGTTCAAAAAAATTCAATTCATGTTTGCAAAAACAACGTTCCCTTCTTTTTCTGATATTTTTCTATTTTTATAACGGATTAATTCAATGAATTAGAACGAATCAACTGATTGATGGTCTATATCTTTTAGACTATAGTTAATGGATACTCTTAAATCATAACTGTAATTATAATTATATAGACTATGATTCCATACCAGAAAATTTTTTTTAATTCCTTTTCGGTTTTGGAGTTCTCAACAACAAATACCTACCCCTCTATTAGAATAGAAATTCATCAAAAATTTAGATTCGATTGTATAGTGTATACCCGTTATGTACACAAAATTGGCAGTTATTCTATTTTCATCATAGAATGATTAGTCGATCTTTTTTCTTCTTTGTAATTTGTATCATGATTCAATCAAAATTTCTCGAGTTCTTCTAATTTGTAACTTCACCGAAATCGGAATAGTTCCTATACTACTACATTAGTATGAAATCGAATCGCGTTGAAATATTTCTTATTTCTTATTTCTTCTCGATTCCTGTCAAAAAGGAACAATTGGAATAGAGGATTCATATCTTTTGTTTTTTTGTTAAAAAAAAGAAGTTTTTATGTTATTTCGTACTATACAATTCTTTTCTTTGTGGGATCTTTTTCCCACGAGAGGTAATGAAAAGAATTCTAGAATGGATTGCTACCTATGCCTAGATCACGGATAAATGGAAATTTTATTGATAAGACCTTTTCAATTGTAGCCGATATCTTATTACGAGTAATTCCGACAACTTCCGGAGAAAAAGAGGCATTTACCTATTACAGAGATGGTGCGATTTGATTCTTTTTTTTTTTGATTTTATATTTATTCATTTTTCTCAGTCTTACGAGGAGAAAAACACATGATTCGAGAAAAAAAATCTACGCTTTTTGAAGGTGAAGTTTGGAAATAGAACAATTCCTTCTGTCGTGTATCCTCGATTAATGCAACCTCAGATGCTATGTTTCAATTATAGATTCTAGTATTAAGCGAAAGGTTACGCCTAGAGGTTCTGTATTACGGGTCAATCCTACTCTACTAGCGCTAATAGGCAGCATAGGGGAAGAAGCGCTACACCTAGGAATCAACAACACGAAAACTTTGTTCTAAGTCAGCCCTTTTCTTAGCGGGCTTGGGACTAAAAGAATGGTTGGGACAACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575504" ref_strand="+" ref_description="SGN-U575504 Tomato 200607#2 [7 ESTs aligned] ">
      <seq>cttagacaatttcagatattcaaggattgcacgttttgttatagattaagcctaacaacaaaagacaattagggattcattggaattctcacatttagttggaagatacttctttcggatgggtcacaccaataggatgaaccaaatgagttctgcatcatgaactttgtactgcgcacattacttagacgggttctagaaaggcatataggaaggaatggagaaatcgagaataaagaaatttaatatgaaagaaaagccaaagaaatgagataatatcggattctatttctttggatctgagctgaatcttgtctatttcaacccccctagattcggattctacttttgagcctttccacaattaactaattttacctttctaatatgtattacgtattcaaattcgtttgaacaagaggagaaaaaaagaggagatagaatccaattcttttagatactttatctaagaaactctacccatctatgttctagatggggtatatctcgctaaactggataaagctattattctaatctagactataaaaaaatatgtatgtggattcatatcaattaattagaaattcattctagggaagagagacccatacaaattaatcatgtgccaagaaccagatttgaactggtgacacgaggattttcagtcctctgctctaccaactgagctatcccggctattcccaatctcgattggaaccgctaacatgaggatttagagtcctttccgtagtatcctcattttatcatataactggggtctatgtcaattaaaaggacaaaagtcgattaaaaaattttatcaaagccgggggatttcttcgatcttcaaaaagatgactttgtaagtttcagtatgagtaatgatattgtattgatcgggaatcattcaactaaggattccttgctcaaagatgttcatttctatgtgtatcatagatatcaaattgtgataagagaaagccatttacgcttagaaaaaaaatccatttctaaaagaatagagtgaatgagaaagataaggaatttgcaaccgctaaggaaagggggtcggataaatagttggggagttaaatagtcttcttggggatagagggacttgaaccctcacgatttctaaagtcgacggattttccttttactataaatttcattgttgccggtattgacatgtagcacgggactctatctttattctcgtccgattaatcagttcttcaaaagatctatcagactatggagtgaatgatttgatcaatgaatattcgattctttcttcaatgtagaatggattcacacccaaatcattcgattttttatagaaaaactacggattcgggtcgtcattaatcatttgatatagtattcaatacgtatgtatatacgtttatccttcacttcattctttttctttctgaagtttcgatgtaaagagtcctctacgaacgcatttaactccatttgttagaatagcttccattgagtctctgcacctatcctttttttctgaaccttggtttgttttcagaaaacaggatttggctcaggattgcccatttttgttaattccagggtttctctgaatttgaaagtgatcacttagtaagtttccataccaaggctcaatccaattaagtccgtagcgtctaccaatttcgccatatccccctttctttctgatttgagattaggatctcgttgtgatttcattcctttgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="60601" stop="58264"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60301" g_stop="58564" g_length="1738"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1740" r_length="1740" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U575504" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>1738</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U575504" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60301" e_stop="58564"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTAGACAATTTCAGATATTCAAGGATTGCACGTTTTGTTATAGATTAAGCCTAACAACAAAAGACAATTAGGGATTCATTGGAATTCTCACATTTAGTTGGAAGATACTTCTTTCGGATGGGTCACACCAATAGGATGAACCAAATGAGTTCTGCATCATGAACTTTGTACTGCGCACGTTACTTAGACGGGTTCTAGAAAGGCATATAGGAAGGAATGGAGAAATCGAGAATAAAGAAATTTAATATGAAAGAAAAGCCAAAGAAATGAGATAATATCAGATTCTATTTCTTTGGATCTGAGCTGAATGTTGTCTATTTCAACCCCCCTAGATTCGGATTCTACTTTTGAGCCTTTCCACAATTAACTAATTTTACCTTTCTAATATGTATTACGTAATCAAATTCGTTTGAACAAGAGGAGAAAAAAAGAGGAGATAGAATCCAATTCTTTTAGATACTTTATCTAAGAAACTCTACCCATCTATGTTCTAGATGGGGTATATCTCGCTAAACTGGATAAAGCTATTATTCTAATCTAGACTATAAAAAAATATGTATGTGGATTCATATCAATTAATTAGAAATTCATTCTAGGGAAGAGAGACCCATACAAATTAATCATGTGCCAAGAACCAGATTTGAACTGGTGACACGAGGATTTTCAGTCCTCTGCTCTACCAACTGAGCTATCCCGGCTATTCCCAATCTCGATTGGGACCGCTAACATGAGGATTTAGAGTCCTTTCCATAATATCCTCATTTTATCATATAACTGGGGTCTATGTCAATTAAAAGGACAAAAGTCGATTAAAATTTTTTATCAAAGCCGGGGGATTTCTTCGATCTTCAAAAATATGACTTTGTAAGTTTTAGTATGAGTAATGATATTGTATTGATCGGGAATCATTCAACTAGGGATTTCTTGCTCAAATATGTTCATTTCTATGTGTATCATAGATATCAAATTGTGATAAGAGAAAGCCATTTACGCTTAGAAAAAAAATCCATTTCTAAAAGAATAGAGTGAATGAGAAAGATAAGGAATTTGGAACCGCTAAGGAAAGGGGGTCGGATAAATAGTTGGGGAGTTAAATAGTCTTTTTGGGGATAGAGGGACTTGAACCCTCACGATTTTTAAAGTCGACGGATTTTCCTTTTAATATAAATTTCATTGTTGCCGGTATTGACATGTAGAACGGGACTCTATCTTTATTCTCGTCCGATTAATCAGATCTTCAAAAGATCTATCAGACTTTGGAGTGAATGATTTGATCAATGAATATTCGATTCTTTCTTCAATATAGAATGGATTCACA-CCAATTC-TTCGATTTTTTATAGAAAAACTACGAATTCGGGTCGTCATTAATCATTTGATATAGTATTCAATACGTATGTATATACGTTTATCCTTCACTTCATTCTTTTTCTTTCTGAAGTTTCGATGTAAAGAGTCCTCTACGAACGCATTTAACTCCATTTGTTAGAATACCTTCCATTGAGTCTCTGCACCTATCCTTTTTTTCTGAACCTTGGATTGTTTTCAGAAAACAGGATTTGGCTCAGGATTGCCCATTTTTGTTAATTCCAGGGTTTCTCTGAATTTGAAACTGATCACTTAGTAATTTTCCATACCAAGGCTCAATCCAATTAAGTCCGTAGCGTCTACCAATTTCGCCATATCTCCCTTTCTTTTTGTTTTGAGATTAGGATCTTGTTGTGATTTCATTCCTTTTTA</genome_strand>
        <mrna_strand>CTTAGACAATTTCAGATATTCAAGGATTGCACGTTTTGTTATAGATTAAGCCTAACAACAAAAGACAATTAGGGATTCATTGGAATTCTCACATTTAGTTGGAAGATACTTCTTTCGGATGGGTCACACCAATAGGATGAACCAAATGAGTTCTGCATCATGAACTTTGTACTGCGCACATTACTTAGACGGGTTCTAGAAAGGCATATAGGAAGGAATGGAGAAATCGAGAATAAAGAAATTTAATATGAAAGAAAAGCCAAAGAAATGAGATAATATCGGATTCTATTTCTTTGGATCTGAGCTGAATCTTGTCTATTTCAACCCCCCTAGATTCGGATTCTACTTTTGAGCCTTTCCACAATTAACTAATTTTACCTTTCTAATATGTATTACGTATTCAAATTCGTTTGAACAAGAGGAGAAAAAAAGAGGAGATAGAATCCAATTCTTTTAGATACTTTATCTAAGAAACTCTACCCATCTATGTTCTAGATGGGGTATATCTCGCTAAACTGGATAAAGCTATTATTCTAATCTAGACTATAAAAAAATATGTATGTGGATTCATATCAATTAATTAGAAATTCATTCTAGGGAAGAGAGACCCATACAAATTAATCATGTGCCAAGAACCAGATTTGAACTGGTGACACGAGGATTTTCAGTCCTCTGCTCTACCAACTGAGCTATCCCGGCTATTCCCAATCTCGATTGGAACCGCTAACATGAGGATTTAGAGTCCTTTCCGTAGTATCCTCATTTTATCATATAACTGGGGTCTATGTCAATTAAAAGGACAAAAGTCGATTAAAAAATTTTATCAAAGCCGGGGGATTTCTTCGATCTTCAAAAAGATGACTTTGTAAGTTTCAGTATGAGTAATGATATTGTATTGATCGGGAATCATTCAACTAAGGATTCCTTGCTCAAAGATGTTCATTTCTATGTGTATCATAGATATCAAATTGTGATAAGAGAAAGCCATTTACGCTTAGAAAAAAAATCCATTTCTAAAAGAATAGAGTGAATGAGAAAGATAAGGAATTTGCAACCGCTAAGGAAAGGGGGTCGGATAAATAGTTGGGGAGTTAAATAGTCTTCTTGGGGATAGAGGGACTTGAACCCTCACGATTTCTAAAGTCGACGGATTTTCCTTTTACTATAAATTTCATTGTTGCCGGTATTGACATGTAGCACGGGACTCTATCTTTATTCTCGTCCGATTAATCAGTTCTTCAAAAGATCTATCAGACTATGGAGTGAATGATTTGATCAATGAATATTCGATTCTTTCTTCAATGTAGAATGGATTCACACCCAAATCATTCGATTTTTTATAGAAAAACTACGGATTCGGGTCGTCATTAATCATTTGATATAGTATTCAATACGTATGTATATACGTTTATCCTTCACTTCATTCTTTTTCTTTCTGAAGTTTCGATGTAAAGAGTCCTCTACGAACGCATTTAACTCCATTTGTTAGAATAGCTTCCATTGAGTCTCTGCACCTATCCTTTTTTTCTGAACCTTGGTTTGTTTTCAGAAAACAGGATTTGGCTCAGGATTGCCCATTTTTGTTAATTCCAGGGTTTCTCTGAATTTGAAAGTGATCACTTAGTAAGTTTCCATACCAAGGCTCAATCCAATTAAGTCCGTAGCGTCTACCAATTTCGCCATATCCCCCTTTCTTTCTGATTTGAGATTAGGATCTCGTTGTGATTTCATTCCTTTGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596597" ref_strand="+" ref_description="SGN-U596597 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aaggaaaatccgtcgactttaaaatcgtgagggttcaagtccctctatccccaaaagactatttaactcccaactatttatccgaccccctttcctagcggtccaaattcttatctttctcatcactctaatctttagaaatgatttttttctagcgaaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="+" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="58843" stop="59616"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59143" g_stop="59316" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="+" ref_id="SGN-U596597" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>174</cumulative_length_of_scored_exons>
        <coverage percentage="1.074" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U596597" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59143" e_stop="59316"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGAAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAAGACTATTTAACTCCCCAACTATTTATCCGACCCCCTTTCCTTAGCGGTTCCAAATTCCTTATCTTTCTCATTCACTCTATTCTTTTAGAAATGGATTTTTTTTCTAAGCGTAAATG</genome_strand>
        <mrna_strand>AAGGAAAATCCGTCGACTTT-AAAATCGTGAGGGTTCAAGTCCCTCTATCCCC-AAAAGACTATTTAACT-CCCAACTATTTATCCGACCCCCTTTCC-TAGCGG-TCCAAATT-CTTATCTTTCTCA-TCACTCTAATC-TTTAGAAAT-GA-TTTTTTTCT-AGCG-AAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585782" ref_strand="+" ref_description="SGN-U585782 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>gtgaaatgcaaaactacgacgaggaattcacatggatttaggaaaggcctgctgtatttgtgtacaagctaaggttttttgaaaaatgaatatctttggtcactttcattgtcaaataggcttttccttcgtataccttacttacctcgacctagcgaagcacaacaaaaaaggtagtcttctttttctgtattcaaccaagaaaaacccctccacctggattcgaatcttaatactattattaaatattaattcaataataataaaaggaatataccaacacaagatcttctaaatcttgagatggcaattcctatacattctcttctatttgcttacgtgttctattctaaatcactaagaaaaaaatgaaaataaagacctcctgattctatttatagaaaatagaaataaatagaaatctttaaagaatttataattaaagaagaaatcagataagtaattaatttagaattccccgtttttagagaaaaaaacaagagaaacaggagaatttgtcgaagagtaatatatagttagaaggttctactaactaaataaaatggaaataagtataatggaaataaaatcggattccagtcgatgaatcttgcaatgagatatgccctacaataaaccaataaacaaagcaaactagttcgttcgaccaaaatgaattcttgttttgactcaatagttattgatgacttgacattttcaatttcgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="63068" stop="61750"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62768" g_stop="62048" g_length="721"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="728" r_length="728" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U585782" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U585782" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62768" e_stop="62048"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAATGCAAAACTACGACGAGGAATTCACATGGATTTAGGAAAGGCCTGCTATATTTGTGTACAAGCTAAGGTTTTTTGAAAAATGAATATCTTTGGTATCTTTCATTGTCAAATAGGCTTTTCCTTCGTATACCTTACTTACCTCGACCTAGCGAAGCACAACAAAAAAGGTAGTCTTCTTTTTCTGTATTCAACCAAGAAAAACCCCTCCACCTGGATTCGAATCCTAATAATATTATTAAATGTTAATTCAATAATAATAAAAGGAATATACCAACACAAGATCTTCTAAATCTTGAGATGGCAATTCCTATACATTCTCTTCTATTTGATTACGTGTTCTATTCTAAATCACTAAGAAAAAAATGAAAATAAAGACCTCCTGATTCTA-TT-T-----ATAGAAATAAATAGAAATCTTTAAAGAATTTATAATTAAAGAAGAAATCAGATAAGTAATTAATTTAGAATTCCCCATTTTTAGAGAAAAAAACAAGAGAAACAGGAGAATTTGTCGAAGAGTAATATATAGTTAGAAGGTTCTACTAACTAAATAAAATGGAAATAAGTATAATGGAAATAAAATCGAATTCCAGTCGATGAATCTTGCAATGAGATATGCCCTACAATAAACGAATAAACAAAGCAAACTAGTCGGTTCGGCCAAAATGAATTCTTGTTTTGACTAAATAGTTATGGATGACTTGACAATTCCAATTCGAAT</genome_strand>
        <mrna_strand>GTGAAATGCAAAACTACGACGAGGAATTCACATGGATTTAGGAAAGGCCTGCTGTATTTGTGTACAAGCTAAGGTTTTTTGAAAAATGAATATCTTTGGTCACTTTCATTGTCAAATAGGCTTTTCCTTCGTATACCTTACTTACCTCGACCTAGCGAAGCACAACAAAAAAGGTAGTCTTCTTTTTCTGTATTCAACCAAGAAAAACCCCTCCACCTGGATTCGAATCTTAATACTATTATTAAATATTAATTCAATAATAATAAAAGGAATATACCAACACAAGATCTTCTAAATCTTGAGATGGCAATTCCTATACATTCTCTTCTATTTGCTTACGTGTTCTATTCTAAATCACTAAGAAAAAAATGAAAATAAAGACCTCCTGATTCTATTTATAGAAAATAGAAATAAATAGAAATCTTTAAAGAATTTATAATTAAAGAAGAAATCAGATAAGTAATTAATTTAGAATTCCCCGTTTTTAGAGAAAAAAACAAGAGAAACAGGAGAATTTGTCGAAGAGTAATATATAGTTAGAAGGTTCTACTAACTAAATAAAATGGAAATAAGTATAATGGAAATAAAATCGGATTCCAGTCGATGAATCTTGCAATGAGATATGCCCTACAATAAACCAATAAACAAAGCAAACTAGTTCGTTCGACCAAAATGAATTCTTGTTTTGACTCAATAGTTATTGATGACTTGACATTTTCAATTTCGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U599093" ref_strand="+" ref_description="SGN-U599093 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>cgagaaggtctacggttcgagtccgtatagccctataaaaatgaaaaatgcaaaaaaaaattgtataatttgcatttcttcattattatttcttgcttgtacctaaatgaaacccaattattcctataactttactcccggcaatcgtttaaccagatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="-" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="63424" stop="62664"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63124" g_stop="62964" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="-" ref_id="SGN-U599093" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>161</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U599093" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63124" e_stop="62964"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGAAGGTCTACGGTTCGAGTCCATATAGCCCTATAAAAATGAAAAATGCAAAAAAATTTTTGTATAATTTGCATTTCTTCATTATTATTTCTTGCTTGTAACTAAATGAAACCCAATTATTCCTATAAGTTTACTCACGGCAATCGTTTAAGCAGATGA</genome_strand>
        <mrna_strand>CGAGAAGGTCTACGGTTCGAGTCCGTATAGCCCTATAAAAATGAAAAATGCAAAAAAA-AATTGTATAATTTGCATTTCTTCATTATTATTTCTTGCTTGTACCTAAATGAAACCCAATTATTCCTATAACTTTACTCCCGGCAATCGTTTAACCAGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576640" ref_strand="+" ref_description="SGN-U576640 Tomato 200607#2 [14 ESTs aligned] (*GB) gi|89280641|ref|YP_514858.1| (e_value=2e-67) ATP; (*ATH) ATCG00470.1 (e_value=3e-60) |; (*SWP) sp|Q2MII1|ATPE_SOLBU (e_value=1e-68) ATP synthase epsilon chain OS=Solanum bulbocastanum GN=atpE; ">
      <seq>ggtatctttgctatgacattttataattggaatttttgcatcagaattggattctgctcgattgaatttgattggattcacccgacagaatctaaataggatcagaaagagaacttctttttatcattcaaacgaaccaactagttatgaaatcggattgctagcctccacccgtgttctagctcgtcggagagctagatttgcctcaattttttgtctccttccttcagcctttttcacattagcttccgctatttcaagagtttgctgagcttcttgtggattaatgtcactacccttctccgcatcatttactaaaacagtgatctcattatttcctattctagcaaaaccacccatcagagccatcgttaaccattggtcgttaaggcgtattctcaaaatccctatatctacagctgtggcaataggggcgtgatttggtaatatgccaatttgaccactattagtagataaaacaatttcttccacttctgaatcccaaacaattcgattaggggtcagtacactaagatttaaggtcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0223O24-qyoXg/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0223O24.1" temp_strand="+" temp_description="C02HBa0223O24.1  AC215427.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0223O24 sequenced_by:kribb upload_account_name:korea">
        <position start="63771" stop="64905"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64114" g_stop="64605" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="546" r_length="492" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0223O24.1" gen_strand="+" ref_id="SGN-U576640" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="0.901" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0223O24.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U576640" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64114" e_stop="64605"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGGATTCTGTTTGATTGTATTCACCCGACAGAATCTAAATAGGATTAGAAAGAGAACTTCTTTTTATTATTCGAACGTACCAACTAGTTATGAAATCGGATTGCTAGCCTCCACCCGTGTTCTAGCTCGTCGGAGAGCTAGATTTGCCTCAATTTTTTGTCTCCTTCCTTCAGCCTTTTTCACATTAGCTTCCGCTATTTCAAGAGTTTGCTGAGCTTCTTGTGGATTAATGTCACTACCCTTCTCCGCATCATTTACTAAAACAGTGATCTCATTATTTCCTATTCTAGCAAAACCACCCATCAGAGCCATCGTTAACCATTGGTCGTTAAGGCGTATTCTCAAAATCCCTAGATCTACAGCTGTGGCAATAGGGGCGTGATTTGGTAATATGCCAATTTGACCACTATTAGTAGATAAAACAATATCTTCCACTTCTGAATCCGAAACAATTCGATTAGGGGTCAGTACACTAAGATTTAAGGTCAT</genome_strand>
        <mrna_strand>TGCTCGATTGAATTTGATTGGATTCACCCGACAGAATCTAAATAGGATCAGAAAGAGAACTTCTTTTTATCATTCAAACGAACCAACTAGTTATGAAATCGGATTGCTAGCCTCCACCCGTGTTCTAGCTCGTCGGAGAGCTAGATTTGCCTCAATTTTTTGTCTCCTTCCTTCAGCCTTTTTCACATTAGCTTCCGCTATTTCAAGAGTTTGCTGAGCTTCTTGTGGATTAATGTCACTACCCTTCTCCGCATCATTTACTAAAACAGTGATCTCATTATTTCCTATTCTAGCAAAACCACCCATCAGAGCCATCGTTAACCATTGGTCGTTAAGGCGTATTCTCAAAATCCCTATATCTACAGCTGTGGCAATAGGGGCGTGATTTGGTAATATGCCAATTTGACCACTATTAGTAGATAAAACAATTTCTTCCACTTCTGAATCCCAAACAATTCGATTAGGGGTCAGTACACTAAGATTTAAGGTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>37</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="2247" PGL_stop="1763"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="2247" e_stop="1763"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.930"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.930">
            <gDNA_exon_boundary e_start="2247" e_stop="1763" e_length="485"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2247" stop="1763"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591302" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAAATGGAGAAACCAACCCTTCAACTCTTGGCCAGCAGCTGCAAATAATTTTGTTAGTAATCTCCTTGTTTGGTGTGTTAATTCTATAGAATACCCTTGTTAATTATCCATTAATTTTAAGAAGGGGGCGTGACCAGTAGCTTAGGAAGTTTGTTTTAGTTATTGAATGTGCTAAGTATGAACGGAAACCATAATCGGATTATTAGTGGTGTCATGTTGGTGCTTGGGCTGTTTTGATTAAAGCAAACTGCAGGAAAATTCTGTTTTGGCATTATGTATATGTTGAATGTTATTATGAGTATATACTCCAAAGGATGAATACGATAAGGTAGATGTGTTGCAAATTATAAAATGAGTTATCGCTCGGTGTGTCGTTGCTTTGCTGGTATGGTTGCCGAGACGGAACTGTTTTGGGGAGGGGGCTGTTTAATATGATTCTTTGGGTTATATGTGTTATTGGTATTGCTGTGGATAATTTTGATTG</gDNA_template>
            <first_frame> G  N  G  E  T  N  P  S  T  L  G  Q  Q  L  Q  I  I  L  L  V  I  S  L  F  G  V  L  I  L  *  N  T  L  V  N  Y  P  L  I  L  R  R  G  R  D  Q  *  L  R  K  F  V  L  V  I  E  C  A  K  Y  E  R  K  P  *  S  D  Y  *  W  C  H  V  G  A  W  A  V  L  I  K  A  N  C  R  K  I  L  F  W  H  Y  V  Y  V  E  C  Y  Y  E  Y  I  L  Q  R  M  N  T  I  R  *  M  C  C  K  L  *  N  E  L  S  L  G  V  S  L  L  C  W  Y  G  C  R  D  G  T  V  L  G  R  G  L  F  N  M  I  L  W  V  I  C  V  I  G  I  A  V  D  N  F  D   </first_frame>
            <second_frame>  E  M  E  K  P  T  L  Q  L  L  A  S  S  C  K  *  F  C  *  *  S  P  C  L  V  C  *  F  Y  R  I  P  L  L  I  I  H  *  F  *  E  G  G  V  T  S  S  L  G  S  L  F  *  L  L  N  V  L  S  M  N  G  N  H  N  R  I  I  S  G  V  M  L  V  L  G  L  F  *  L  K  Q  T  A  G  K  F  C  F  G  I  M  Y  M  L  N  V  I  M  S  I  Y  S  K  G  *  I  R  *  G  R  C  V  A  N  Y  K  M  S  Y  R  S  V  C  R  C  F  A  G  M  V  A  E  T  E  L  F  W  G  G  G  C  L  I  *  F  F  G  L  Y  V  L  L  V  L  L  W  I  I  L  I  </second_frame>
            <third_frame>   K  W  R  N  Q  P  F  N  S  W  P  A  A  A  N  N  F  V  S  N  L  L  V  W  C  V  N  S  I  E  Y  P  C  *  L  S  I  N  F  K  K  G  A  *  P  V  A  *  E  V  C  F  S  Y  *  M  C  *  V  *  T  E  T  I  I  G  L  L  V  V  S  C  W  C  L  G  C  F  D  *  S  K  L  Q  E  N  S  V  L  A  L  C  I  C  *  M  L  L  *  V  Y  T  P  K  D  E  Y  D  K  V  D  V  L  Q  I  I  K  *  V  I  A  R  C  V  V  A  L  L  V  W  L  P  R  R  N  C  F  G  E  G  A  V  *  Y  D  S  L  G  Y  M  C  Y  W  Y  C  C  G  *  F  *  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0223O24.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="5142" PGL_stop="5874"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5142" e_stop="5874"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.940"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.940">
            <gDNA_exon_boundary e_start="5142" e_stop="5874" e_length="733"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5142" stop="5874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U564544" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCCTTAAATGATCTGTATGCTCCTCTTCTGAACGTGAATATACCAGAATATCGTCTATAAATACAATAACAAACATATCAAGGAATGGTTTAAATACTCGATTCATTAAATCCATGAACACCGCTGGAGCATTAGTCAGCCCAAAAGACATCACTCTAAACTCATAATGCCCATATCGGGTCCGGAATGCCGTCTTTGGAATATCAGCCTCCCTTACCCGCACCTGATGATAACCTGACCGCAAGTCTATCTTTGAAAAACACTTTGCACCCTTCAACTGGTCAAATAGATCGTCAATCCTTGGGAGGGGATAGCTGTTCTTTATTGTTACTTTGTTCAACTGCCTATAATCAATGCACATCCGCAGCGACCCATCCTTCTTCCTCACAAACAGTACCGGTGCTCCCCAAGGTGACGTACTAGGCCTGATGAAGCCCTTTTCTAGCAAATCCCTCAATTGCTCTTTCAATTCTTTCAACTCAGCAGGTGCCATTCTATAAGGAGTATAGATATAGGCTGGGTATCTGGTAGTACATCTACAGTAAACTCTATCTCCCGTTCGGGAGGAAGGCCTGGAAGTTCCTCGGGGAATACATCGGGAAATTTATTAACTACTGGGACTGATTGAAGAGTCGGTGCCTCTGCCTTTATGTCAAGCACCCGAATCAGATGGTAAATATAGCCTTTTCTAACCATCTTCCCGGCCTTGAGGTATGAAATGAACTTACCTTT</gDNA_template>
            <first_frame> V  L  K  *  S  V  C  S  S  S  E  R  E  Y  T  R  I  S  S  I  N  T  I  T  N  I  S  R  N  G  L  N  T  R  F  I  K  S  M  N  T  A  G  A  L  V  S  P  K  D  I  T  L  N  S  *  C  P  Y  R  V  R  N  A  V  F  G  I  S  A  S  L  T  R  T  *  *  *  P  D  R  K  S  I  F  E  K  H  F  A  P  F  N  W  S  N  R  S  S  I  L  G  R  G  *  L  F  F  I  V  T  L  F  N  C  L  *  S  M  H  I  R  S  D  P  S  F  F  L  T  N  S  T  G  A  P  Q  G  D  V  L  G  L  M  K  P  F  S  S  K  S  L  N  C  S  F  N  S  F  N  S  A  G  A  I  L  *  G  V  *  I  *  A  G  Y  L  V  V  H  L  Q  *  T  L  S  P  V  R  E  E  G  L  E  V  P  R  G  I  H  R  E  I  Y  *  L  L  G  L  I  E  E  S  V  P  L  P  L  C  Q  A  P  E  S  D  G  K  Y  S  L  F  *  P  S  S  R  P  *  G  M  K  *  T  Y  L  </first_frame>
            <second_frame>  S  L  N  D  L  Y  A  P  L  L  N  V  N  I  P  E  Y  R  L  *  I  Q  *  Q  T  Y  Q  G  M  V  *  I  L  D  S  L  N  P  *  T  P  L  E  H  *  S  A  Q  K  T  S  L  *  T  H  N  A  H  I  G  S  G  M  P  S  L  E  Y  Q  P  P  L  P  A  P  D  D  N  L  T  A  S  L  S  L  K  N  T  L  H  P  S  T  G  Q  I  D  R  Q  S  L  G  G  D  S  C  S  L  L  L  L  C  S  T  A  Y  N  Q  C  T  S  A  A  T  H  P  S  S  S  Q  T  V  P  V  L  P  K  V  T  Y  *  A  *  *  S  P  F  L  A  N  P  S  I  A  L  S  I  L  S  T  Q  Q  V  P  F  Y  K  E  Y  R  Y  R  L  G  I  W  *  Y  I  Y  S  K  L  Y  L  P  F  G  R  K  A  W  K  F  L  G  E  Y  I  G  K  F  I  N  Y  W  D  *  L  K  S  R  C  L  C  L  Y  V  K  H  P  N  Q  M  V  N  I  A  F  S  N  H  L  P  G  L  E  V  *  N  E  L  T  F </second_frame>
            <third_frame>   P  *  M  I  C  M  L  L  F  *  T  *  I  Y  Q  N  I  V  Y  K  Y  N  N  K  H  I  K  E  W  F  K  Y  S  I  H  *  I  H  E  H  R  W  S  I  S  Q  P  K  R  H  H  S  K  L  I  M  P  I  S  G  P  E  C  R  L  W  N  I  S  L  P  Y  P  H  L  M  I  T  *  P  Q  V  Y  L  *  K  T  L  C  T  L  Q  L  V  K  *  I  V  N  P  W  E  G  I  A  V  L  Y  C  Y  F  V  Q  L  P  I  I  N  A  H  P  Q  R  P  I  L  L  P  H  K  Q  Y  R  C  S  P  R  *  R  T  R  P  D  E  A  L  F  *  Q  I  P  Q  L  L  F  Q  F  F  Q  L  S  R  C  H  S  I  R  S  I  D  I  G  W  V  S  G  S  T  S  T  V  N  S  I  S  R  S  G  G  R  P  G  S  S  S  G  N  T  S  G  N  L  L  T  T  G  T  D  *  R  V  G  A  S  A  F  M  S  S  T  R  I  R  W  *  I  *  P  F  L  T  I  F  P  A  L  R  Y  E  M  N  L  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5302" stop="5565"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>261</number_coding_nucleotides>
                  <number_encoded_amino_acids>87</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>THNAHIGSGMPSLEYQPPLPAPDDNLTASLSLKNTLHPSTGQIDRQSLGGDSCSLLLLCSTAYNQCTSAATHPSSSQTVPVLPKVTY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="6116" PGL_stop="6703"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6116" e_stop="6703"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.920"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.920">
            <gDNA_exon_boundary e_start="6116" e_stop="6703" e_length="588"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6116" stop="6703"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587176" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTCAAATAGTTCTATCAACTCAGACTCTATTCCGATCCTACTAGCAACAAAGGGAGATATATATGATAAGGTGGAACCTGGGTCTATCAATGCATACACACTTCGGGAGAATAGTGATAATATACCTGTGATCACATTAGGTGACGCCTCTTGATCTTGCCTATTAGTCAAAGCATATATACGGTTTGAGGGACCGCTAGAACTGGAAGCTCCACCACGTCCTCTACCACGGCCTGCTGGCGCCTGAATACCCTGCTCCGTAGGGCGCATAGCCACAGAAGAAGATGAACCAGCAACGGACCCTGTAGGCTGTGCCATACCACCTGCACTAACACTCCCTCATAGTATGGCCCTGACGGCCGCAAGAAAAACATGCACCCGTAGCCCAACGACATTCCCCAGGATGAGACTTACCACAACGAGAACACCGAGGCAAAGGTGGCCTCGACTGGCTCAAACCCCTGCCCATCTGTGACCCTGACGCCCTAGAGCTCTGACCAGCTCCAGAATATCCCATAAGATCGAACCCCCTACCCATGAAACGTAGAGGTGCACTCTGTGCTGGCTGGGAAGAAAATCTAACATGCT</gDNA_template>
            <first_frame> L  K  *  F  Y  Q  L  R  L  Y  S  D  P  T  S  N  K  G  R  Y  I  *  *  G  G  T  W  V  Y  Q  C  I  H  T  S  G  E  *  *  *  Y  T  C  D  H  I  R  *  R  L  L  I  L  P  I  S  Q  S  I  Y  T  V  *  G  T  A  R  T  G  S  S  T  T  S  S  T  T  A  C  W  R  L  N  T  L  L  R  R  A  H  S  H  R  R  R  *  T  S  N  G  P  C  R  L  C  H  T  T  C  T  N  T  P  S  *  Y  G  P  D  G  R  K  K  N  M  H  P  *  P  N  D  I  P  Q  D  E  T  Y  H  N  E  N  T  E  A  K  V  A  S  T  G  S  N  P  C  P  S  V  T  L  T  P  *  S  S  D  Q  L  Q  N  I  P  *  D  R  T  P  Y  P  *  N  V  E  V  H  S  V  L  A  G  K  K  I  *  H  A </first_frame>
            <second_frame>  S  N  S  S  I  N  S  D  S  I  P  I  L  L  A  T  K  G  D  I  Y  D  K  V  E  P  G  S  I  N  A  Y  T  L  R  E  N  S  D  N  I  P  V  I  T  L  G  D  A  S  *  S  C  L  L  V  K  A  Y  I  R  F  E  G  P  L  E  L  E  A  P  P  R  P  L  P  R  P  A  G  A  *  I  P  C  S  V  G  R  I  A  T  E  E  D  E  P  A  T  D  P  V  G  C  A  I  P  P  A  L  T  L  P  H  S  M  A  L  T  A  A  R  K  T  C  T  R  S  P  T  T  F  P  R  M  R  L  T  T  T  R  T  P  R  Q  R  W  P  R  L  A  Q  T  P  A  H  L  *  P  *  R  P  R  A  L  T  S  S  R  I  S  H  K  I  E  P  P  T  H  E  T  *  R  C  T  L  C  W  L  G  R  K  S  N  M   </second_frame>
            <third_frame>   Q  I  V  L  S  T  Q  T  L  F  R  S  Y  *  Q  Q  R  E  I  Y  M  I  R  W  N  L  G  L  S  M  H  T  H  F  G  R  I  V  I  I  Y  L  *  S  H  *  V  T  P  L  D  L  A  Y  *  S  K  H  I  Y  G  L  R  D  R  *  N  W  K  L  H  H  V  L  Y  H  G  L  L  A  P  E  Y  P  A  P  *  G  A  *  P  Q  K  K  M  N  Q  Q  R  T  L  *  A  V  P  Y  H  L  H  *  H  S  L  I  V  W  P  *  R  P  Q  E  K  H  A  P  V  A  Q  R  H  S  P  G  *  D  L  P  Q  R  E  H  R  G  K  G  G  L  D  W  L  K  P  L  P  I  C  D  P  D  A  L  E  L  *  P  A  P  E  Y  P  I  R  S  N  P  L  P  M  K  R  R  G  A  L  C  A  G  W  E  E  N  L  T  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6363" stop="6590"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IPCSVGRIATEEDEPATDPVGCAIPPALTLPHSMALTAARKTCTRSPTTFPRMRLTTTRTPRQRWPRLAQTPAHL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="6921" PGL_stop="6604"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6921" e_stop="6604"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.921"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.921">
            <gDNA_exon_boundary e_start="6921" e_stop="6604" e_length="318"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6921" stop="6604"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587175" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACATCGTTATGTAATGGGATTGGATCGTTATCTGATTGACGGTTCTATGGCAGTGACTCTTCCGCCAGGTATGGACATTGCTCAGGTGCAGGCATATGCACAGGGGGTAGAGGATCGGCACCGGGGACATCAGCCAGATAGAGATTATAATAGAGGCCAGCATAAGAGGGCTAGATCAGCAGGTTATCCTGACGAGTTTCAAAGCGGGCAGTCTCAGCAGCATGTTAGATTTTCTTCCCAGCCAGCACAGAGTGCACCTCTACGTTTCATGGGTAGGGGGTTCGATCTTATGGGATATTCTGGAGCTGGTCAGAGCTC</gDNA_template>
            <first_frame> T  S  L  C  N  G  I  G  S  L  S  D  *  R  F  Y  G  S  D  S  S  A  R  Y  G  H  C  S  G  A  G  I  C  T  G  G  R  G  S  A  P  G  T  S  A  R  *  R  L  *  *  R  P  A  *  E  G  *  I  S  R  L  S  *  R  V  S  K  R  A  V  S  A  A  C  *  I  F  F  P  A  S  T  E  C  T  S  T  F  H  G  *  G  V  R  S  Y  G  I  F  W  S  W  S  E  L </first_frame>
            <second_frame>  H  R  Y  V  M  G  L  D  R  Y  L  I  D  G  S  M  A  V  T  L  P  P  G  M  D  I  A  Q  V  Q  A  Y  A  Q  G  V  E  D  R  H  R  G  H  Q  P  D  R  D  Y  N  R  G  Q  H  K  R  A  R  S  A  G  Y  P  D  E  F  Q  S  G  Q  S  Q  Q  H  V  R  F  S  S  Q  P  A  Q  S  A  P  L  R  F  M  G  R  G  F  D  L  M  G  Y  S  G  A  G  Q  S   </second_frame>
            <third_frame>   I  V  M  *  W  D  W  I  V  I  *  L  T  V  L  W  Q  *  L  F  R  Q  V  W  T  L  L  R  C  R  H  M  H  R  G  *  R  I  G  T  G  D  I  S  Q  I  E  I  I  I  E  A  S  I  R  G  L  D  Q  Q  V  I  L  T  S  F  K  A  G  S  L  S  S  M  L  D  F  L  P  S  Q  H  R  V  H  L  Y  V  S  W  V  G  G  S  I  L  W  D  I  L  E  L  V  R  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6920" stop="6606"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>315</number_coding_nucleotides>
                  <number_encoded_amino_acids>105</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HRYVMGLDRYLIDGSMAVTLPPGMDIAQVQAYAQGVEDRHRGHQPDRDYNRGQHKRARSAGYPDEFQSGQSQQHVRFSSQPAQSAPLRFMGRGFDLMGYSGAGQS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="12699" PGL_stop="12048"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12699" e_stop="12048"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.972"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.972">
            <gDNA_exon_boundary e_start="12699" e_stop="12048" e_length="652"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12699" stop="12048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587845" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAATCATTGGCTTATCAAATTATCTATCGAGCCGTGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCCGTTTTACGTCAAGCAATACGTGGAGTAACTCTTGATATAACAGTAAAAGCAAGACGTGTAGGTGGATCGACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGCGGCATCCCGAACACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTTGTTAATCCATGAACAGGATCTATACATCTCGATCGGAAAAGAATCAAGAGAAAAAGAAAGAATCAGAATTGATCGATAGATTTCTTGAAACAAACGAAAAGGAAACGAAAGATGAAACATAAATCATGGATCAACTAAGCCCTCTCGGGGACTTTCTTAAAGAGGAACCTCATGTAAATACCATGGAATAAGGTTTGATCCTATTCATGGAGATTCCGTAACTATTCCAAAAATGGAAAGTTCGACACAATTGGTATTTTTTTTGAAATTGGAAGCAGTTACTAATTCATGA</gDNA_template>
            <first_frame> K  N  H  W  L  I  K  L  S  I  E  P  *  K  R  F  N  K  R  Q  K  Q  I  H  Y  P  F  Y  V  K  Q  Y  V  E  *  L  L  I  *  Q  *  K  Q  D  V  *  V  D  R  L  I  K  F  P  L  K  *  D  P  H  K  E  K  H  L  P  F  V  G  Y  *  R  H  P  E  H  V  R  V  E  I  W  L  S  N  *  V  P  N  *  W  M  L  P  K  G  V  A  M  P  Y  A  K  R  K  R  L  I  E  W  Q  R  Q  I  E  L  L  H  I  F  V  N  P  *  T  G  S  I  H  L  D  R  K  R  I  K  R  K  R  K  N  Q  N  *  S  I  D  F  L  K  Q  T  K  R  K  R  K  M  K  H  K  S  W  I  N  *  A  L  S  G  T  F  L  K  R  N  L  M  *  I  P  W  N  K  V  *  S  Y  S  W  R  F  R  N  Y  S  K  N  G  K  F  D  T  I  G  I  F  F  E  I  G  S  S  Y  *  F  M  </first_frame>
            <second_frame>  K  I  I  G  L  S  N  Y  L  S  S  R  E  K  D  S  T  K  D  R  N  K  S  T  I  R  F  T  S  S  N  T  W  S  N  S  *  Y  N  S  K  S  K  T  C  R  W  I  D  S  S  S  S  H  *  N  R  I  H  T  R  K  S  T  C  H  S  L  V  I  S  G  I  P  N  T  S  G  S  K  Y  G  F  Q  I  K  F  R  I  S  G  C  C  Q  R  E  W  R  C  H  T  Q  K  G  R  D  S  *  N  G  R  G  K  *  S  F  C  T  F  L  L  I  H  E  Q  D  L  Y  I  S  I  G  K  E  S  R  E  K  E  R  I  R  I  D  R  *  I  S  *  N  K  R  K  G  N  E  R  *  N  I  N  H  G  S  T  K  P  S  R  G  L  S  *  R  G  T  S  C  K  Y  H  G  I  R  F  D  P  I  H  G  D  S  V  T  I  P  K  M  E  S  S  T  Q  L  V  F  F  L  K  L  E  A  V  T  N  S  * </second_frame>
            <third_frame>   K  S  L  A  Y  Q  I  I  Y  R  A  V  K  K  I  Q  Q  K  T  E  T  N  P  L  S  V  L  R  Q  A  I  R  G  V  T  L  D  I  T  V  K  A  R  R  V  G  G  S  T  H  Q  V  P  I  E  I  G  S  T  Q  G  K  A  L  A  I  R  W  L  L  A  A  S  R  T  R  P  G  R  N  M  A  F  K  L  S  S  E  L  V  D  A  A  K  G  S  G  D  A  I  R  K  K  E  E  T  H  R  M  A  E  A  N  R  A  F  A  H  F  C  *  S  M  N  R  I  Y  T  S  R  S  E  K  N  Q  E  K  K  K  E  S  E  L  I  D  R  F  L  E  T  N  E  K  E  T  K  D  E  T  *  I  M  D  Q  L  S  P  L  G  D  F  L  K  E  E  P  H  V  N  T  M  E  *  G  L  I  L  F  M  E  I  P  *  L  F  Q  K  W  K  V  R  H  N  W  Y  F  F  *  N  W  K  Q  L  L  I  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12697" stop="12335"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSLAYQIIYRAVKKIQQKTETNPLSVLRQAIRGVTLDITVKARRVGGSTHQVPIEIGSTQGKALAIRWLLAASRTRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="15579" PGL_stop="16204"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15579" e_stop="16204"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="15579" e_stop="16204" e_length="626"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15579" stop="16204"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U593380" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATCTCATGGAGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACATGCAAGTCGGATGGGAAACACGGGAAACGGTGTTTCCAGTGGCGGACGGGTGAGTAACGCGTAAGAACCTGCCCTTGGGAGGGGAACAACAGCTGGAAACGGCTGCTAATACCCCGTAGGCTGAGGAGCAAAATGAGGAATCCGCCCGAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGACGATGATCAGTAGCTGGTCCGAGAGGATGATCAGCCACACTGGGACTGAGACACGGCCTAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCACAATGGGCGAAAGCCTGATGGAGCAATGCCGCGTGGAGGTAGAAGGCCTACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAGCAATGACGGTATCTGGGGAATAAGCATCGGCTAACTCTGTGCCAGCAGCCGTGGTAATACAGAGGATGCAAGCGTTATCCGGAATAATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGG</gDNA_template>
            <first_frame> E  S  H  G  E  F  D  P  G  S  G  *  T  L  A  A  C  L  T  H  A  S  R  M  G  N  T  G  N  G  V  S  S  G  G  R  V  S  N  A  *  E  P  A  L  G  R  G  T  T  A  G  N  G  C  *  Y  P  V  G  *  G  A  K  *  G  I  R  P  R  R  G  S  R  L  I  S  *  L  V  R  Q  *  L  T  K  T  M  I  S  S  W  S  E  R  M  I  S  H  T  G  T  E  T  R  P  R  L  L  R  E  A  A  V  G  N  F  P  Q  W  A  K  A  *  W  S  N  A  A  W  R  *  K  A  Y  G  S  *  T  S  F  P  G  E  E  A  M  T  V  S  G  E  *  A  S  A  N  S  V  P  A  A  V  V  I  Q  R  M  Q  A  L  S  G  I  I  G  R  K  A  S  V  G  G  F  L  S  P  P  S  N  P  R  A  Q  P  W  T  G  G  G  N  Y  Q  A  G  V  R  *   </first_frame>
            <second_frame>  N  L  M  E  S  S  I  L  A  Q  D  E  R  W  R  H  A  *  H  M  Q  V  G  W  E  T  R  E  T  V  F  P  V  A  D  G  *  V  T  R  K  N  L  P  L  G  G  E  Q  Q  L  E  T  A  A  N  T  P  *  A  E  E  Q  N  E  E  S  A  R  G  G  A  R  V  *  L  A  S  W  *  G  N  S  L  P  R  R  *  S  V  A  G  P  R  G  *  S  A  T  L  G  L  R  H  G  L  D  S  Y  G  R  Q  Q  W  G  I  F  H  N  G  R  K  P  D  G  A  M  P  R  G  G  R  R  P  T  G  R  E  L  L  F  P  E  K  K  Q  *  R  Y  L  G  N  K  H  R  L  T  L  C  Q  Q  P  W  *  Y  R  G  C  K  R  Y  P  E  *  L  G  V  K  R  L  *  V  A  F  *  V  R  R  Q  I  P  G  L  N  P  G  Q  A  V  E  T  T  K  L  E  Y  G  R  </second_frame>
            <third_frame>   I  S  W  R  V  R  S  W  L  R  M  N  A  G  G  M  L  N  T  C  K  S  D  G  K  H  G  K  R  C  F  Q  W  R  T  G  E  *  R  V  R  T  C  P  W  E  G  N  N  S  W  K  R  L  L  I  P  R  R  L  R  S  K  M  R  N  P  P  E  E  G  L  A  S  D  *  L  V  G  E  A  I  A  Y  Q  D  D  D  Q  *  L  V  R  E  D  D  Q  P  H  W  D  *  D  T  A  *  T  P  T  G  G  S  S  G  E  F  S  T  M  G  E  S  L  M  E  Q  C  R  V  E  V  E  G  L  R  V  V  N  F  F  S  R  R  R  S  N  D  G  I  W  G  I  S  I  G  *  L  C  A  S  S  R  G  N  T  E  D  A  S  V  I  R  N  N  W  A  *  S  V  C  R  W  L  F  K  S  A  V  K  S  Q  G  S  T  L  D  R  R  W  K  L  P  S  W  S  T  V  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0223O24.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="17739" PGL_stop="17915"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17739" e_stop="17915"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="17739" e_stop="17915" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17739" stop="17915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602366" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTCGGCCTCAATGGGAAAATAAAATGGAGCACCTAACAACGCATCTTCATAGACCAAGAACTACGAGATCACCCCTTTCATTATGGGGTGACGGAGGGATCGTACCATTCGAGACGTTTTTTTCTTGACTCGAAATCGAAATGGGAGCAGGTTTGAAAAAGGATCTTAGAGTGTCT</gDNA_template>
            <first_frame> V  R  P  Q  W  E  N  K  M  E  H  L  T  T  H  L  H  R  P  R  T  T  R  S  P  L  S  L  W  G  D  G  G  I  V  P  F  E  T  F  F  S  *  L  E  I  E  M  G  A  G  L  K  K  D  L  R  V  S </first_frame>
            <second_frame>  F  G  L  N  G  K  I  K  W  S  T  *  Q  R  I  F  I  D  Q  E  L  R  D  H  P  F  H  Y  G  V  T  E  G  S  Y  H  S  R  R  F  F  L  D  S  K  S  K  W  E  Q  V  *  K  R  I  L  E  C   </second_frame>
            <third_frame>   S  A  S  M  G  K  *  N  G  A  P  N  N  A  S  S  *  T  K  N  Y  E  I  T  P  F  I  M  G  *  R  R  D  R  T  I  R  D  V  F  F  L  T  R  N  R  N  G  S  R  F  E  K  G  S  *  S  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0223O24.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="20153" PGL_stop="19363"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20153" e_stop="19363"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.975"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.975">
            <gDNA_exon_boundary e_start="20153" e_stop="19363" e_length="791"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20153" stop="19363"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570769" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTACGTCGTTCGGCGGACGGTAAAAAGCCAGAACTAGAAGGAGACGTTGGGAAACTCTATAAAACTCATGACAACGTTTGTTTAAATGCAGCTACAGCAAGCACATCTACAACAAAAGGAGCCAGTGGAATAAGATATACAAATTTAAATATGAACAAAATCTTCGATAAACCATTTATTCCAAAGAACCAAAAAGACTCATTATTTATACCACCACAAATACATACTTACTCAGAAAGTTTAAACCAGGATAAAAAAGCCTACAACCACATAACCCGCTCATATATTGAAAACCTTTATAAAATCCAAAATTATTTAAACTCAACACCTAGATCTCCAACTACCAAAGACCCTAATACTGATTTTATAACCCAAAAGCTACAAGGATATAATAAGTTAATAGCACAACCAGGCACCAATGCAAATCTAGTAAAAACATGTTATAGTTATGGATTACTTAATAAAGTTTATACCCAAACAGGAGATGAAATATCTACCATACCAGAGCTATACAAAGCCTTTATGAACTATAAAAGAATTACTAAAGGAACATTGTTTTATATAATATTTTATTCAGCACCAGCAGAGATATTATTTGATGAGATAAAACCAATTATACAAGTTATAAAAATTGGTTTGACCAGAGATATGATAATTCCAGAAGATATCGGAATACAACAAGAAATACAAAAGATTGAGATACCAGAATTCTACGCCAACAAAAGAGTTATAGGAATAGAAACTATCCTAAATGAACTAACTAACAATTATTTAAACGGAAATTCAGTAT</gDNA_template>
            <first_frame> A  T  S  F  G  G  R  *  K  A  R  T  R  R  R  R  W  E  T  L  *  N  S  *  Q  R  L  F  K  C  S  Y  S  K  H  I  Y  N  K  R  S  Q  W  N  K  I  Y  K  F  K  Y  E  Q  N  L  R  *  T  I  Y  S  K  E  P  K  R  L  I  I  Y  T  T  T  N  T  Y  L  L  R  K  F  K  P  G  *  K  S  L  Q  P  H  N  P  L  I  Y  *  K  P  L  *  N  P  K  L  F  K  L  N  T  *  I  S  N  Y  Q  R  P  *  Y  *  F  Y  N  P  K  A  T  R  I  *  *  V  N  S  T  T  R  H  Q  C  K  S  S  K  N  M  L  *  L  W  I  T  *  *  S  L  Y  P  N  R  R  *  N  I  Y  H  T  R  A  I  Q  S  L  Y  E  L  *  K  N  Y  *  R  N  I  V  L  Y  N  I  L  F  S  T  S  R  D  I  I  *  *  D  K  T  N  Y  T  S  Y  K  N  W  F  D  Q  R  Y  D  N  S  R  R  Y  R  N  T  T  R  N  T  K  D  *  D  T  R  I  L  R  Q  Q  K  S  Y  R  N  R  N  Y  P  K  *  T  N  *  Q  L  F  K  R  K  F  S   </first_frame>
            <second_frame>  L  R  R  S  A  D  G  K  K  P  E  L  E  G  D  V  G  K  L  Y  K  T  H  D  N  V  C  L  N  A  A  T  A  S  T  S  T  T  K  G  A  S  G  I  R  Y  T  N  L  N  M  N  K  I  F  D  K  P  F  I  P  K  N  Q  K  D  S  L  F  I  P  P  Q  I  H  T  Y  S  E  S  L  N  Q  D  K  K  A  Y  N  H  I  T  R  S  Y  I  E  N  L  Y  K  I  Q  N  Y  L  N  S  T  P  R  S  P  T  T  K  D  P  N  T  D  F  I  T  Q  K  L  Q  G  Y  N  K  L  I  A  Q  P  G  T  N  A  N  L  V  K  T  C  Y  S  Y  G  L  L  N  K  V  Y  T  Q  T  G  D  E  I  S  T  I  P  E  L  Y  K  A  F  M  N  Y  K  R  I  T  K  G  T  L  F  Y  I  I  F  Y  S  A  P  A  E  I  L  F  D  E  I  K  P  I  I  Q  V  I  K  I  G  L  T  R  D  M  I  I  P  E  D  I  G  I  Q  Q  E  I  Q  K  I  E  I  P  E  F  Y  A  N  K  R  V  I  G  I  E  T  I  L  N  E  L  T  N  N  Y  L  N  G  N  S  V  </second_frame>
            <third_frame>   Y  V  V  R  R  T  V  K  S  Q  N  *  K  E  T  L  G  N  S  I  K  L  M  T  T  F  V  *  M  Q  L  Q  Q  A  H  L  Q  Q  K  E  P  V  E  *  D  I  Q  I  *  I  *  T  K  S  S  I  N  H  L  F  Q  R  T  K  K  T  H  Y  L  Y  H  H  K  Y  I  L  T  Q  K  V  *  T  R  I  K  K  P  T  T  T  *  P  A  H  I  L  K  T  F  I  K  S  K  I  I  *  T  Q  H  L  D  L  Q  L  P  K  T  L  I  L  I  L  *  P  K  S  Y  K  D  I  I  S  *  *  H  N  Q  A  P  M  Q  I  *  *  K  H  V  I  V  M  D  Y  L  I  K  F  I  P  K  Q  E  M  K  Y  L  P  Y  Q  S  Y  T  K  P  L  *  T  I  K  E  L  L  K  E  H  C  F  I  *  Y  F  I  Q  H  Q  Q  R  Y  Y  L  M  R  *  N  Q  L  Y  K  L  *  K  L  V  *  P  E  I  *  *  F  Q  K  I  S  E  Y  N  K  K  Y  K  R  L  R  Y  Q  N  S  T  P  T  K  E  L  *  E  *  K  L  S  *  M  N  *  L  T  I  I  *  T  E  I  Q  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20152" stop="19364"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>789</number_coding_nucleotides>
                  <number_encoded_amino_acids>263</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRRSADGKKPELEGDVGKLYKTHDNVCLNAATASTSTTKGASGIRYTNLNMNKIFDKPFIPKNQKDSLFIPPQIHTYSESLNQDKKAYNHITRSYIENLYKIQNYLNSTPRSPTTKDPNTDFITQKLQGYNKLIAQPGTNANLVKTCYSYGLLNKVYTQTGDEISTIPELYKAFMNYKRITKGTLFYIIFYSAPAEILFDEIKPIIQVIKIGLTRDMIIPEDIGIQQEIQKIEIPEFYANKRVIGIETILNELTNNYLNGNSV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="23737" PGL_stop="22990"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23737" e_stop="22990"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.908"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.908">
            <gDNA_exon_boundary e_start="23737" e_stop="22990" e_length="748"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23737" stop="22990"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589636" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGTATTATGTAAAAAATCATAAAATAAAAAGACCATACAGACCAAAAAGAAAAATATCCCAATGTACTTGTTATAATTGTGGAAAGATAGGACACATAGCTAAAGATTGTAAATTACCCAAAAATCCAAAAAGAAAACAAATAGAAGAATTAATTATAGACAATGAAAAATATATGCAAATAGAGTACATAGATTATGAATTAAGTGAAAATGATAGTATATATGAAGTATCAGACATAGAAACTGAGAATGAAGAAGAAAATATTAACATAGATAACAACGAAACAGATGAAGAAATATAATGTCTGAAAATGAAATAAAAATAATATCTAAGGAAGAATATCAAGATGAAGAATCATCAGAACAGAAAATTATATTTGATAATACGATATTTGAACAAATAAAAGGAAAAGATTTAGATTTAAGTGTTGAAAAAGTACTAGAAATACCTATTTTAAGAAATTGGTTTAAAAGACAAAAAGAAGAATACTATGTAGTTAGTCAAAAAGAACATATCATAGATTGTAAATTCACAAGAGGAAAAGCATATATACCTATAATAAATAAAAGAATGATAAAAAAAGAAATACAAGATATAAAAGCTAAAACACCAATAAAATATGTACATTTAGGAGGAACAGAAATATTAATAAAAGCCTGCTTTAGAGAAGGAATAGATACACCTATAGAAATATATTTAGCAGATGATAGAATTGTACACCCTATAGAAAAAAGCATAATTAGTGC</gDNA_template>
            <first_frame> R  Y  Y  V  K  N  H  K  I  K  R  P  Y  R  P  K  R  K  I  S  Q  C  T  C  Y  N  C  G  K  I  G  H  I  A  K  D  C  K  L  P  K  N  P  K  R  K  Q  I  E  E  L  I  I  D  N  E  K  Y  M  Q  I  E  Y  I  D  Y  E  L  S  E  N  D  S  I  Y  E  V  S  D  I  E  T  E  N  E  E  E  N  I  N  I  D  N  N  E  T  D  E  E  I  *  C  L  K  M  K  *  K  *  Y  L  R  K  N  I  K  M  K  N  H  Q  N  R  K  L  Y  L  I  I  R  Y  L  N  K  *  K  E  K  I  *  I  *  V  L  K  K  Y  *  K  Y  L  F  *  E  I  G  L  K  D  K  K  K  N  T  M  *  L  V  K  K  N  I  S  *  I  V  N  S  Q  E  E  K  H  I  Y  L  *  *  I  K  E  *  *  K  K  K  Y  K  I  *  K  L  K  H  Q  *  N  M  Y  I  *  E  E  Q  K  Y  *  *  K  P  A  L  E  K  E  *  I  H  L  *  K  Y  I  *  Q  M  I  E  L  Y  T  L  *  K  K  A  *  L  V  </first_frame>
            <second_frame>  G  I  M  *  K  I  I  K  *  K  D  H  T  D  Q  K  E  K  Y  P  N  V  L  V  I  I  V  E  R  *  D  T  *  L  K  I  V  N  Y  P  K  I  Q  K  E  N  K  *  K  N  *  L  *  T  M  K  N  I  C  K  *  S  T  *  I  M  N  *  V  K  M  I  V  Y  M  K  Y  Q  T  *  K  L  R  M  K  K  K  I  L  T  *  I  T  T  K  Q  M  K  K  Y  N  V  *  K  *  N  K  N  N  I  *  G  R  I  S  R  *  R  I  I  R  T  E  N  Y  I  *  *  Y  D  I  *  T  N  K  R  K  R  F  R  F  K  C  *  K  S  T  R  N  T  Y  F  K  K  L  V  *  K  T  K  R  R  I  L  C  S  *  S  K  R  T  Y  H  R  L  *  I  H  K  R  K  S  I  Y  T  Y  N  K  *  K  N  D  K  K  R  N  T  R  Y  K  S  *  N  T  N  K  I  C  T  F  R  R  N  R  N  I  N  K  S  L  L  *  R  R  N  R  Y  T  Y  R  N  I  F  S  R  *  *  N  C  T  P  Y  R  K  K  H  N  *  C </second_frame>
            <third_frame>   V  L  C  K  K  S  *  N  K  K  T  I  Q  T  K  K  K  N  I  P  M  Y  L  L  *  L  W  K  D  R  T  H  S  *  R  L  *  I  T  Q  K  S  K  K  K  T  N  R  R  I  N  Y  R  Q  *  K  I  Y  A  N  R  V  H  R  L  *  I  K  *  K  *  *  Y  I  *  S  I  R  H  R  N  *  E  *  R  R  K  Y  *  H  R  *  Q  R  N  R  *  R  N  I  M  S  E  N  E  I  K  I  I  S  K  E  E  Y  Q  D  E  E  S  S  E  Q  K  I  I  F  D  N  T  I  F  E  Q  I  K  G  K  D  L  D  L  S  V  E  K  V  L  E  I  P  I  L  R  N  W  F  K  R  Q  K  E  E  Y  Y  V  V  S  Q  K  E  H  I  I  D  C  K  F  T  R  G  K  A  Y  I  P  I  I  N  K  R  M  I  K  K  E  I  Q  D  I  K  A  K  T  P  I  K  Y  V  H  L  G  G  T  E  I  L  I  K  A  C  F  R  E  G  I  D  T  P  I  E  I  Y  L  A  D  D  R  I  V  H  P  I  E  K  S  I  I  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23444" stop="22992"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>453</number_coding_nucleotides>
                  <number_encoded_amino_acids>151</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RNIMSENEIKIISKEEYQDEESSEQKIIFDNTIFEQIKGKDLDLSVEKVLEIPILRNWFKRQKEEYYVVSQKEHIIDCKFTRGKAYIPIINKRMIKKEIQDIKAKTPIKYVHLGGTEILIKACFREGIDTPIEIYLADDRIVHPIEKSIIS</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23737" stop="23435"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>300</number_coding_nucleotides>
                  <number_encoded_amino_acids>100</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RYYVKNHKIKRPYRPKRKISQCTCYNCGKIGHIAKDCKLPKNPKRKQIEELIIDNEKYMQIEYIDYELSENDSIYEVSDIETENEEENINIDNNETDEEI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="26289" PGL_stop="26994"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26289" e_stop="26994"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="26289" e_stop="26994" e_length="706"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26289" stop="26994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580401" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TACAAAAAAACCTGACTTGAATGATCCTGTATTAAGAGCTAAATTGGCTAAGGGTATGGGTCATAATTATTATGGCGAGCCCGCATGGCCCAATGATCTTTTATATATTTTTCCAGTAGTAATTCTAGGTACTATTGCATGTAATGTAGGCTTAGCCGTTTTAGAACCATCAATGATTGGTGAACCAGCGGATCCATTTGCAACCCCTTTGGAAATCTTACTTGAATGGTATTTCTTTCCTGTATTTCAAATACTTCGTACAGTGCCTAATAAATTATTGGGGGTTCTTTTAATGGTTTCAGTACCTGCGGGATTATTAACAGTACCTTTTTTAGAGAATGTTAATAAATTCCAAAATCCATTTCGCCGTCCAGTAGCGACGACTGTCTTTTTGATTGGTACCGCAGTCGCCCTTTGGTTGGGCATTGGTGCAACATTACCTATTGATAAATCCCTAACTTTAGGTCTTTTTTAAATTTTTTAATTGATTCAATTGTGAACTAACACGACATGTGTATCTAGGGAATAGTTTCTTCAAAGCGAATTCTCCCTAGATACATCTATTCAATTTCATTATTAATTTCTTTCTAATATCTAATATATGATATATTAATTGTGCTAAATTGTGCTTTTTCAATCTATTTTCACTAAGTAAGTCCAATAGATTTAAAACTTATTTTTTGCTAAATCAATTATGAAATATTTT</gDNA_template>
            <first_frame> Y  K  K  T  *  L  E  *  S  C  I  K  S  *  I  G  *  G  Y  G  S  *  L  L  W  R  A  R  M  A  Q  *  S  F  I  Y  F  S  S  S  N  S  R  Y  Y  C  M  *  C  R  L  S  R  F  R  T  I  N  D  W  *  T  S  G  S  I  C  N  P  F  G  N  L  T  *  M  V  F  L  S  C  I  S  N  T  S  Y  S  A  *  *  I  I  G  G  S  F  N  G  F  S  T  C  G  I  I  N  S  T  F  F  R  E  C  *  *  I  P  K  S  I  S  P  S  S  S  D  D  C  L  F  D  W  Y  R  S  R  P  L  V  G  H  W  C  N  I  T  Y  *  *  I  P  N  F  R  S  F  L  N  F  L  I  D  S  I  V  N  *  H  D  M  C  I  *  G  I  V  S  S  K  R  I  L  P  R  Y  I  Y  S  I  S  L  L  I  S  F  *  Y  L  I  Y  D  I  L  I  V  L  N  C  A  F  S  I  Y  F  H  *  V  S  P  I  D  L  K  L  I  F  C  *  I  N  Y  E  I  F  </first_frame>
            <second_frame>  T  K  K  P  D  L  N  D  P  V  L  R  A  K  L  A  K  G  M  G  H  N  Y  Y  G  E  P  A  W  P  N  D  L  L  Y  I  F  P  V  V  I  L  G  T  I  A  C  N  V  G  L  A  V  L  E  P  S  M  I  G  E  P  A  D  P  F  A  T  P  L  E  I  L  L  E  W  Y  F  F  P  V  F  Q  I  L  R  T  V  P  N  K  L  L  G  V  L  L  M  V  S  V  P  A  G  L  L  T  V  P  F  L  E  N  V  N  K  F  Q  N  P  F  R  R  P  V  A  T  T  V  F  L  I  G  T  A  V  A  L  W  L  G  I  G  A  T  L  P  I  D  K  S  L  T  L  G  L  F  *  I  F  *  L  I  Q  L  *  T  N  T  T  C  V  S  R  E  *  F  L  Q  S  E  F  S  L  D  T  S  I  Q  F  H  Y  *  F  L  S  N  I  *  Y  M  I  Y  *  L  C  *  I  V  L  F  Q  S  I  F  T  K  *  V  Q  *  I  *  N  L  F  F  A  K  S  I  M  K  Y  F </second_frame>
            <third_frame>   Q  K  N  L  T  *  M  I  L  Y  *  E  L  N  W  L  R  V  W  V  I  I  I  M  A  S  P  H  G  P  M  I  F  Y  I  F  F  Q  *  *  F  *  V  L  L  H  V  M  *  A  *  P  F  *  N  H  Q  *  L  V  N  Q  R  I  H  L  Q  P  L  W  K  S  Y  L  N  G  I  S  F  L  Y  F  K  Y  F  V  Q  C  L  I  N  Y  W  G  F  F  *  W  F  Q  Y  L  R  D  Y  *  Q  Y  L  F  *  R  M  L  I  N  S  K  I  H  F  A  V  Q  *  R  R  L  S  F  *  L  V  P  Q  S  P  F  G  W  A  L  V  Q  H  Y  L  L  I  N  P  *  L  *  V  F  F  K  F  F  N  *  F  N  C  E  L  T  R  H  V  Y  L  G  N  S  F  F  K  A  N  S  P  *  I  H  L  F  N  F  I  I  N  F  F  L  I  S  N  I  *  Y  I  N  C  A  K  L  C  F  F  N  L  F  S  L  S  K  S  N  R  F  K  T  Y  F  L  L  N  Q  L  *  N  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26290" stop="26763"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>471</number_coding_nucleotides>
                  <number_encoded_amino_acids>157</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TKKPDLNDPVLRAKLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILLEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="27186" PGL_stop="27988"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="27186" e_stop="27988"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="27186" e_stop="27988" e_length="803"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27186" stop="27988"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585866" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATGAGTTTAGCCAATTTATCATGAAAGGTAAAAGGGGATAAAGGAACCGTGTGTTGATTGTCCTGTAAATATAAGTTGTCTTCCTCCATATGTAAAAAGGGAATAAATAAATCAATTAAATTTTGGGATGCGTCATGAAGTGCTTTTTTCGGAGTTAAACTTCCGTTTGTCCATATTTCGATAAAAAGTATCTCTTGTTTTTCATTCCCATTCCCATAAGAATGAATACTATGATTCGCGTTTCGAACAGGCATGAATAAAGCATCTTTAGGATAACTTCCATCTTGAAAGTTATGTGGCGTTTTTATAAGATATCCACGATTTCTCTCTATTGTAATCTAATACAAAAATCAATTGGTTCCGTTAAACTAGCTATATGTTGTGTATTATCAACGATTTCCACATAAGGTGGCAAGATGATATCTTGAGCAGTTACATATCCGGGACCATTGAAACAAATAGACGCCTCAGAAGTTCCATATAAATTACTTCTCAATACAATCTCTTTCAAATTCATTAAAATTTCATGTACCGATTCTTGAATGCCCGTTATGGTAGAATATTCATGTGGTACTTTCTCAGATTTTACACGTGTGATACATGTTCCTTCTATTTCCCCAAGTAAAGCTCTTCGCATCGCAATGCCTATTGTGTCGGCTTGGCCTTTCATAAGTGGAGACAGAATAAAGCGTCCATAATAAAGGCGTTTACTGTCTGTTCTTGATTCAACACACTTCCACTGTAGTGTCCGAGTAGATACTGTTACTTTCTCTCGAACCATAGTACTATTATTTGATTAGATC</gDNA_template>
            <first_frame> M  S  L  A  N  L  S  *  K  V  K  G  D  K  G  T  V  C  *  L  S  C  K  Y  K  L  S  S  S  I  C  K  K  G  I  N  K  S  I  K  F  W  D  A  S  *  S  A  F  F  G  V  K  L  P  F  V  H  I  S  I  K  S  I  S  C  F  S  F  P  F  P  *  E  *  I  L  *  F  A  F  R  T  G  M  N  K  A  S  L  G  *  L  P  S  *  K  L  C  G  V  F  I  R  Y  P  R  F  L  S  I  V  I  *  Y  K  N  Q  L  V  P  L  N  *  L  Y  V  V  Y  Y  Q  R  F  P  H  K  V  A  R  *  Y  L  E  Q  L  H  I  R  D  H  *  N  K  *  T  P  Q  K  F  H  I  N  Y  F  S  I  Q  S  L  S  N  S  L  K  F  H  V  P  I  L  E  C  P  L  W  *  N  I  H  V  V  L  S  Q  I  L  H  V  *  Y  M  F  L  L  F  P  Q  V  K  L  F  A  S  Q  C  L  L  C  R  L  G  L  S  *  V  E  T  E  *  S  V  H  N  K  G  V  Y  C  L  F  L  I  Q  H  T  S  T  V  V  S  E  *  I  L  L  L  S  L  E  P  *  Y  Y  Y  L  I  R   </first_frame>
            <second_frame>  *  V  *  P  I  Y  H  E  R  *  K  G  I  K  E  P  C  V  D  C  P  V  N  I  S  C  L  P  P  Y  V  K  R  E  *  I  N  Q  L  N  F  G  M  R  H  E  V  L  F  S  E  L  N  F  R  L  S  I  F  R  *  K  V  S  L  V  F  H  S  H  S  H  K  N  E  Y  Y  D  S  R  F  E  Q  A  *  I  K  H  L  *  D  N  F  H  L  E  S  Y  V  A  F  L  *  D  I  H  D  F  S  L  L  *  S  N  T  K  I  N  W  F  R  *  T  S  Y  M  L  C  I  I  N  D  F  H  I  R  W  Q  D  D  I  L  S  S  Y  I  S  G  T  I  E  T  N  R  R  L  R  S  S  I  *  I  T  S  Q  Y  N  L  F  Q  I  H  *  N  F  M  Y  R  F  L  N  A  R  Y  G  R  I  F  M  W  Y  F  L  R  F  Y  T  C  D  T  C  S  F  Y  F  P  K  *  S  S  S  H  R  N  A  Y  C  V  G  L  A  F  H  K  W  R  Q  N  K  A  S  I  I  K  A  F  T  V  C  S  *  F  N  T  L  P  L  *  C  P  S  R  Y  C  Y  F  L  S  N  H  S  T  I  I  *  L  D  </second_frame>
            <third_frame>   E  F  S  Q  F  I  M  K  G  K  R  G  *  R  N  R  V  L  I  V  L  *  I  *  V  V  F  L  H  M  *  K  G  N  K  *  I  N  *  I  L  G  C  V  M  K  C  F  F  R  S  *  T  S  V  C  P  Y  F  D  K  K  Y  L  L  F  F  I  P  I  P  I  R  M  N  T  M  I  R  V  S  N  R  H  E  *  S  I  F  R  I  T  S  I  L  K  V  M  W  R  F  Y  K  I  S  T  I  S  L  Y  C  N  L  I  Q  K  S  I  G  S  V  K  L  A  I  C  C  V  L  S  T  I  S  T  *  G  G  K  M  I  S  *  A  V  T  Y  P  G  P  L  K  Q  I  D  A  S  E  V  P  Y  K  L  L  L  N  T  I  S  F  K  F  I  K  I  S  C  T  D  S  *  M  P  V  M  V  E  Y  S  C  G  T  F  S  D  F  T  R  V  I  H  V  P  S  I  S  P  S  K  A  L  R  I  A  M  P  I  V  S  A  W  P  F  I  S  G  D  R  I  K  R  P  *  *  R  R  L  L  S  V  L  D  S  T  H  F  H  C  S  V  R  V  D  T  V  T  F  S  R  T  I  V  L  L  F  D  *  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0223O24.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="28434" PGL_stop="28032"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28434" e_stop="28032"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.978"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.978">
            <gDNA_exon_boundary e_start="28434" e_stop="28032" e_length="403"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28434" stop="28032"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584886" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCAAAAATTAGTTCGCGTCGGAATGGACGTATTAGTTCACGTAAGGGTGCACGTAGAATACCAAAGGGAGTTATTCATGTTCAAGCAAGTTTCAATAATACCATTATCACTGTTACAGATGTACGGGGTCGAGTAGTTTCTTGGTCCTCAACTGGTACTTCTGGATTCAAAGGTACGAGAAGAGGAACACTGTTTGCTGCTCAAACCGCAGCAACAAACGCTATCCGTACAGTAGTTGATCAAGGTATGGAACGAGCAGAAGTCATGATAAAAGGTCCCGGTCTCGGAAGAGATGCAGCATTACGAGCTATTCGTCGCAGTGGTATACTATTAACTTTCGTACGGGATGTAACTCCGATGCCACATAATGGCTGTAGACCTCTGAAAAAAAGACGTGTGTAG</gDNA_template>
            <first_frame> T  K  N  *  F  A  S  E  W  T  Y  *  F  T  *  G  C  T  *  N  T  K  G  S  Y  S  C  S  S  K  F  Q  *  Y  H  Y  H  C  Y  R  C  T  G  S  S  S  F  L  V  L  N  W  Y  F  W  I  Q  R  Y  E  K  R  N  T  V  C  C  S  N  R  S  N  K  R  Y  P  Y  S  S  *  S  R  Y  G  T  S  R  S  H  D  K  R  S  R  S  R  K  R  C  S  I  T  S  Y  S  S  Q  W  Y  T  I  N  F  R  T  G  C  N  S  D  A  T  *  W  L  *  T  S  E  K  K  T  C  V  </first_frame>
            <second_frame>  P  K  I  S  S  R  R  N  G  R  I  S  S  R  K  G  A  R  R  I  P  K  G  V  I  H  V  Q  A  S  F  N  N  T  I  I  T  V  T  D  V  R  G  R  V  V  S  W  S  S  T  G  T  S  G  F  K  G  T  R  R  G  T  L  F  A  A  Q  T  A  A  T  N  A  I  R  T  V  V  D  Q  G  M  E  R  A  E  V  M  I  K  G  P  G  L  G  R  D  A  A  L  R  A  I  R  R  S  G  I  L  L  T  F  V  R  D  V  T  P  M  P  H  N  G  C  R  P  L  K  K  R  R  V  * </second_frame>
            <third_frame>   Q  K  L  V  R  V  G  M  D  V  L  V  H  V  R  V  H  V  E  Y  Q  R  E  L  F  M  F  K  Q  V  S  I  I  P  L  S  L  L  Q  M  Y  G  V  E  *  F  L  G  P  Q  L  V  L  L  D  S  K  V  R  E  E  E  H  C  L  L  L  K  P  Q  Q  Q  T  L  S  V  Q  *  L  I  K  V  W  N  E  Q  K  S  *  *  K  V  P  V  S  E  E  M  Q  H  Y  E  L  F  V  A  V  V  Y  Y  *  L  S  Y  G  M  *  L  R  C  H  I  M  A  V  D  L  *  K  K  D  V  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28433" stop="28032"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>399</number_coding_nucleotides>
                  <number_encoded_amino_acids>133</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PKISSRRNGRISSRKGARRIPKGVIHVQASFNNTIITVTDVRGRVVSWSSTGTSGFKGTRRGTLFAAQTAATNAIRTVVDQGMERAEVMIKGPGLGRDAALRAIRRSGILLTFVRDVTPMPHNGCRPLKKRRV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="29054" PGL_stop="28676"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29054" e_stop="28676"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="29054" e_stop="28676" e_length="379"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29054" stop="28676"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568772" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATAATGACAGACCGAGAGGCTCGACTAGAAGGAATAGGTGGAGAAATTTTGTGTTATATCTGGTAATCCTTTATAATATGCAAATTGAATTCGAAACTTCCTATTTGCGAAAAAGGAGGGGAGAGTTATCTAATATCTTTCGCATTAGTTGATACCTCAAAGGAACTTTGTTTTATACAGATACTGCAAGGAGATAGAGTCAAAATTGAAGTAAGTCCTTATGATTCAACCAAAGGACATATAATTTATCGACTCCACAACAAAGATTTGAAGGATTAGGTTTTCAACTTCACCATTCCTTTCGTGGGAATACAATTCGAGATGAAAAATTTCAAGAAACTTATTTTCTTCCAAGAAATAGATTCAGAATTAAGGTAA</gDNA_template>
            <first_frame> Y  N  D  R  P  R  G  S  T  R  R  N  R  W  R  N  F  V  L  Y  L  V  I  L  Y  N  M  Q  I  E  F  E  T  S  Y  L  R  K  R  R  G  E  L  S  N  I  F  R  I  S  *  Y  L  K  G  T  L  F  Y  T  D  T  A  R  R  *  S  Q  N  *  S  K  S  L  *  F  N  Q  R  T  Y  N  L  S  T  P  Q  Q  R  F  E  G  L  G  F  Q  L  H  H  S  F  R  G  N  T  I  R  D  E  K  F  Q  E  T  Y  F  L  P  R  N  R  F  R  I  K  V  </first_frame>
            <second_frame>  I  M  T  D  R  E  A  R  L  E  G  I  G  G  E  I  L  C  Y  I  W  *  S  F  I  I  C  K  L  N  S  K  L  P  I  C  E  K  G  G  E  S  Y  L  I  S  F  A  L  V  D  T  S  K  E  L  C  F  I  Q  I  L  Q  G  D  R  V  K  I  E  V  S  P  Y  D  S  T  K  G  H  I  I  Y  R  L  H  N  K  D  L  K  D  *  V  F  N  F  T  I  P  F  V  G  I  Q  F  E  M  K  N  F  K  K  L  I  F  F  Q  E  I  D  S  E  L  R  * </second_frame>
            <third_frame>   *  *  Q  T  E  R  L  D  *  K  E  *  V  E  K  F  C  V  I  S  G  N  P  L  *  Y  A  N  *  I  R  N  F  L  F  A  K  K  E  G  R  V  I  *  Y  L  S  H  *  L  I  P  Q  R  N  F  V  L  Y  R  Y  C  K  E  I  E  S  K  L  K  *  V  L  M  I  Q  P  K  D  I  *  F  I  D  S  T  T  K  I  *  R  I  R  F  S  T  S  P  F  L  S  W  E  Y  N  S  R  *  K  I  S  R  N  L  F  S  S  K  K  *  I  Q  N  *  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28987" stop="28775"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFIICKLNSKLPICEKGGESYLISFALVDTSKELCFIQILQGDRVKIEVSPYDSTKGHIIYRLHNKDLKD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="29996" PGL_stop="29364"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29996" e_stop="29364"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="29996" e_stop="29364" e_length="633"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29996" stop="29364"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584966" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAACAGAAAATATAGCCAGAAGGGCTATTTCACTAGAAGCATCCAAAATGCCTATACGAACTCAATTCATTATTTCGTAATGTAATAGAAAAAAATGTAGAAAGGGCTCTTAGATATGAAAGAAAACCGCATGTTTCTTTTTTTTGGACAAAAATATTTCTTTTTTTTTCTTCGCCCTTTGCATTCAAAGAACGGATTAAAAAAATGATTCAACCTCAGACCCATTTAAATGTAGCGGATAATAGCGGGGCTCGAGAATTGATGTGTATTCGAATCATAGGAGCTAGCAATCCTCGATATGCTCATATTGGTGACGTTATTGTTGCTGTGATCAAAGAAGCAATACCAAATATGCCCCTAGAAAGATCAGAAGTAGTCAGAGCTGTAATTTTGCATACCTGTAAAGAACTCAAACGTGACAACGGGATGATAATACTATACGATGACAATGCTGCAGTTGTTATTGATCAAGAAGGAAATCCAAAAGGAACTCGAATTTTTGGTGCAATCGCCCGGGAATTGAGAGAATTAAATTTTACTAAAATAGTTTCATTAGCTCCCGAGGTATTATAAAATGAAATTGTGATCTGTTTCGAGTGGGGTATTTGAAAGAAATAGATTAATTTGTAGATT</gDNA_template>
            <first_frame> *  Q  K  I  *  P  E  G  L  F  H  *  K  H  P  K  C  L  Y  E  L  N  S  L  F  R  N  V  I  E  K  N  V  E  R  A  L  R  Y  E  R  K  P  H  V  S  F  F  W  T  K  I  F  L  F  F  S  S  P  F  A  F  K  E  R  I  K  K  M  I  Q  P  Q  T  H  L  N  V  A  D  N  S  G  A  R  E  L  M  C  I  R  I  I  G  A  S  N  P  R  Y  A  H  I  G  D  V  I  V  A  V  I  K  E  A  I  P  N  M  P  L  E  R  S  E  V  V  R  A  V  I  L  H  T  C  K  E  L  K  R  D  N  G  M  I  I  L  Y  D  D  N  A  A  V  V  I  D  Q  E  G  N  P  K  G  T  R  I  F  G  A  I  A  R  E  L  R  E  L  N  F  T  K  I  V  S  L  A  P  E  V  L  *  N  E  I  V  I  C  F  E  W  G  I  *  K  K  *  I  N  L  *  I </first_frame>
            <second_frame>  N  R  K  Y  S  Q  K  G  Y  F  T  R  S  I  Q  N  A  Y  T  N  S  I  H  Y  F  V  M  *  *  K  K  M  *  K  G  L  L  D  M  K  E  N  R  M  F  L  F  F  G  Q  K  Y  F  F  F  F  L  R  P  L  H  S  K  N  G  L  K  K  *  F  N  L  R  P  I  *  M  *  R  I  I  A  G  L  E  N  *  C  V  F  E  S  *  E  L  A  I  L  D  M  L  I  L  V  T  L  L  L  L  *  S  K  K  Q  Y  Q  I  C  P  *  K  D  Q  K  *  S  E  L  *  F  C  I  P  V  K  N  S  N  V  T  T  G  *  *  Y  Y  T  M  T  M  L  Q  L  L  L  I  K  K  E  I  Q  K  E  L  E  F  L  V  Q  S  P  G  N  *  E  N  *  I  L  L  K  *  F  H  *  L  P  R  Y  Y  K  M  K  L  *  S  V  S  S  G  V  F  E  R  N  R  L  I  C  R   </second_frame>
            <third_frame>   T  E  N  I  A  R  R  A  I  S  L  E  A  S  K  M  P  I  R  T  Q  F  I  I  S  *  C  N  R  K  K  C  R  K  G  S  *  I  *  K  K  T  A  C  F  F  F  L  D  K  N  I  S  F  F  F  F  A  L  C  I  Q  R  T  D  *  K  N  D  S  T  S  D  P  F  K  C  S  G  *  *  R  G  S  R  I  D  V  Y  S  N  H  R  S  *  Q  S  S  I  C  S  Y  W  *  R  Y  C  C  C  D  Q  R  S  N  T  K  Y  A  P  R  K  I  R  S  S  Q  S  C  N  F  A  Y  L  *  R  T  Q  T  *  Q  R  D  D  N  T  I  R  *  Q  C  C  S  C  Y  *  S  R  R  K  S  K  R  N  S  N  F  W  C  N  R  P  G  I  E  R  I  K  F  Y  *  N  S  F  I  S  S  R  G  I  I  K  *  N  C  D  L  F  R  V  G  Y  L  K  E  I  D  *  F  V  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29960" stop="29424"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>534</number_coding_nucleotides>
                  <number_encoded_amino_acids>178</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KHPKCLYELNSLFRNVIEKNVERALRYERKPHVSFFWTKIFLFFSSPFAFKERIKKMIQPQTHLNVADNSGARELMCIRIIGASNPRYAHIGDVIVAVIKEAIPNMPLERSEVVRAVILHTCKELKRDNGMIILYDDNAAVVIDQEGNPKGTRIFGAIARELRELNFTKIVSLAPEVL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="30489" PGL_stop="30354"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30489" e_stop="30354"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="30489" e_stop="30354" e_length="136"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30489" stop="30354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U601812" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAAGGTATTACTCAGTAAATACATATCTTATATATCTTAACTTAAGATTTACTATTCTAGCTTAATTCAAATAGAATTTTTTTGAATCCTTTTATTTGCGGGGAGCTGGATGAGAAGAAACTCTCACGTCCGGTT</gDNA_template>
            <first_frame> S  R  Y  Y  S  V  N  T  Y  L  I  Y  L  N  L  R  F  T  I  L  A  *  F  K  *  N  F  F  E  S  F  Y  L  R  G  A  G  *  E  E  T  L  T  S  G  </first_frame>
            <second_frame>  Q  G  I  T  Q  *  I  H  I  L  Y  I  L  T  *  D  L  L  F  *  L  N  S  N  R  I  F  L  N  P  F  I  C  G  E  L  D  E  K  K  L  S  R  P  V </second_frame>
            <third_frame>   K  V  L  L  S  K  Y  I  S  Y  I  S  *  L  K  I  Y  Y  S  S  L  I  Q  I  E  F  F  *  I  L  L  F  A  G  S  W  M  R  R  N  S  H  V  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0223O24.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="30828" PGL_stop="31341"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30828" e_stop="31341"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.967"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.967">
            <gDNA_exon_boundary e_start="30828" e_stop="31341" e_length="514"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30828" stop="31341"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563870" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCGTTCCAATCACTTCTTACTTAATGGTTAGGTCCGAATTCTTCAATGGAGCTCAGAATCAAATTGTTTCTTGAGTCAATCTTCTTTGTCTTTATTGGATCGAAGCTCTTGATTTTTTGTTCTATTTCTATAAGAAGATTCTTTTTAGTATGGTATGAATGCGTATTGATGCTTTATTACACTGTCTTTTATGAGATTACTCATAGACCTTACATATTGGAATTTTATATCATTGGTATTCTTTTTCTCTCTTTCTCTCATCCTTCCCTTTATCCACATCTTTTTTGTCTATTTTGCTTTACAACTTAGAAGCAGATTTTTTTGTTTATGCAAAAGATTTCAGTTGCTACAAAGATATGACCTATATATCATATCTTGACTGGTTCTTTAGATCCAGATAATGCGAAGTGATGGGTTGGTTATTAGTTCTATAGTTTTTAGTTCATACTATGTGGGCTGGGTTTTTGTAATCCTAACCCTAACAAAACCTACGAGTCACACGCTAAGCATAGC</gDNA_template>
            <first_frame> V  V  P  I  T  S  Y  L  M  V  R  S  E  F  F  N  G  A  Q  N  Q  I  V  S  *  V  N  L  L  C  L  Y  W  I  E  A  L  D  F  L  F  Y  F  Y  K  K  I  L  F  S  M  V  *  M  R  I  D  A  L  L  H  C  L  L  *  D  Y  S  *  T  L  H  I  G  I  L  Y  H  W  Y  S  F  S  L  F  L  S  S  F  P  L  S  T  S  F  L  S  I  L  L  Y  N  L  E  A  D  F  F  V  Y  A  K  D  F  S  C  Y  K  D  M  T  Y  I  S  Y  L  D  W  F  F  R  S  R  *  C  E  V  M  G  W  L  L  V  L  *  F  L  V  H  T  M  W  A  G  F  L  *  S  *  P  *  Q  N  L  R  V  T  R  *  A  *  </first_frame>
            <second_frame>  S  F  Q  S  L  L  T  *  W  L  G  P  N  S  S  M  E  L  R  I  K  L  F  L  E  S  I  F  F  V  F  I  G  S  K  L  L  I  F  C  S  I  S  I  R  R  F  F  L  V  W  Y  E  C  V  L  M  L  Y  Y  T  V  F  Y  E  I  T  H  R  P  Y  I  L  E  F  Y  I  I  G  I  L  F  L  S  F  S  H  P  S  L  Y  P  H  L  F  C  L  F  C  F  T  T  *  K  Q  I  F  L  F  M  Q  K  I  S  V  A  T  K  I  *  P  I  Y  H  I  L  T  G  S  L  D  P  D  N  A  K  *  W  V  G  Y  *  F  Y  S  F  *  F  I  L  C  G  L  G  F  C  N  P  N  P  N  K  T  Y  E  S  H  A  K  H  S </second_frame>
            <third_frame>   R  S  N  H  F  L  L  N  G  *  V  R  I  L  Q  W  S  S  E  S  N  C  F  L  S  Q  S  S  L  S  L  L  D  R  S  S  *  F  F  V  L  F  L  *  E  D  S  F  *  Y  G  M  N  A  Y  *  C  F  I  T  L  S  F  M  R  L  L  I  D  L  T  Y  W  N  F  I  S  L  V  F  F  F  S  L  S  L  I  L  P  F  I  H  I  F  F  V  Y  F  A  L  Q  L  R  S  R  F  F  C  L  C  K  R  F  Q  L  L  Q  R  Y  D  L  Y  I  I  S  *  L  V  L  *  I  Q  I  M  R  S  D  G  L  V  I  S  S  I  V  F  S  S  Y  Y  V  G  W  V  F  V  I  L  T  L  T  K  P  T  S  H  T  L  S  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30853" stop="31137"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>282</number_coding_nucleotides>
                  <number_encoded_amino_acids>94</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WLGPNSSMELRIKLFLESIFFVFIGSKLLIFCSISIRRFFLVWYECVLMLYYTVFYEITHRPYILEFYIIGILFLSFSHPSLYPHLFCLFCFTT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30998" stop="31207"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CFITLSFMRLLIDLTYWNFISLVFFFSLSLILPFIHIFFVYFALQLRSRFFCLCKRFQLLQRYDLYIIS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31035" stop="31229"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TLHIGILYHWYSFSLFLSSFPLSTSFLSILLYNLEADFFVYAKDFSCYKDMTYISYLDWFFRSR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="32134" PGL_stop="31401"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="32134" e_stop="31401"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.922">
            <gDNA_exon_boundary e_start="32134" e_stop="31401" e_length="734"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32134" stop="31401"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575798" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31659" stop="31401"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588052" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATGGGACAAAAAATAAATCCACTTGGTTTCAGACTGGGTACAACGCAAGGTCATCATTCCCTTTGGTTTTCACAACCCAAAAATTATTCTGAGGGTTTACAAGAAGAAAACAAATCAGAGATTGTATCAAGAATTATGTACAAAAAAATATGAGAATGTCCTCTGGCATCGAGGGAATTGCACGTATAGAGATTCAAAAAAGAATCGATCTGATCCAGGTCATAATCTTTATGGGATTCCCAAAATTATTAATAGAAAGTCAACCGCGCGAAATCGAAGAATTACAAATGACCTTACAAAATGAATTTAATTGTGTAAACCGAAAACTGAACATTGCTGTCAAAAGAATTGCAAAACCTTACGGAAACCCTAATATTCTTGCAGAATTTATAGTTGGACAATTAAAGAATAGAGTTTCATTTCGAAAAGCAATGAAAAAGGCTATTGAATTAACAGAACAAGTACAAATTGCGGGGCGTATCGACGGAAAAGAAATTGCACGTGTCGAATGGATCAGAGAAGGCAAGGTTCCCCTACAAACGATTCGAGCTAAAATTGATTATTGCTCTTATACAGTTCGAACTATCTATGGAATATTGGGCATCAAAATTTAGATATTTCTAGACGAGGAATAATTTTAGTACTTGTCTTTCCCTTCTATCCAATGATTGAACAAAAAAAAAGACCAATTCATTCTTTTTCTAATCAAGGGGAACATTACTAATTCTTAATTC</gDNA_template>
            <first_frame> M  G  Q  K  I  N  P  L  G  F  R  L  G  T  T  Q  G  H  H  S  L  W  F  S  Q  P  K  N  Y  S  E  G  L  Q  E  E  N  K  S  E  I  V  S  R  I  M  Y  K  K  I  *  E  C  P  L  A  S  R  E  L  H  V  *  R  F  K  K  E  S  I  *  S  R  S  *  S  L  W  D  S  Q  N  Y  *  *  K  V  N  R  A  K  S  K  N  Y  K  *  P  Y  K  M  N  L  I  V  *  T  E  N  *  T  L  L  S  K  E  L  Q  N  L  T  E  T  L  I  F  L  Q  N  L  *  L  D  N  *  R  I  E  F  H  F  E  K  Q  *  K  R  L  L  N  *  Q  N  K  Y  K  L  R  G  V  S  T  E  K  K  L  H  V  S  N  G  S  E  K  A  R  F  P  Y  K  R  F  E  L  K  L  I  I  A  L  I  Q  F  E  L  S  M  E  Y  W  A  S  K  F  R  Y  F  *  T  R  N  N  F  S  T  C  L  S  L  L  S  N  D  *  T  K  K  K  T  N  S  F  F  F  *  S  R  G  T  L  L  I  L  N   </first_frame>
            <second_frame>  W  D  K  K  *  I  H  L  V  S  D  W  V  Q  R  K  V  I  I  P  F  G  F  H  N  P  K  I  I  L  R  V  Y  K  K  K  T  N  Q  R  L  Y  Q  E  L  C  T  K  K  Y  E  N  V  L  W  H  R  G  N  C  T  Y  R  D  S  K  K  N  R  S  D  P  G  H  N  L  Y  G  I  P  K  I  I  N  R  K  S  T  A  R  N  R  R  I  T  N  D  L  T  K  *  I  *  L  C  K  P  K  T  E  H  C  C  Q  K  N  C  K  T  L  R  K  P  *  Y  S  C  R  I  Y  S  W  T  I  K  E  *  S  F  I  S  K  S  N  E  K  G  Y  *  I  N  R  T  S  T  N  C  G  A  Y  R  R  K  R  N  C  T  C  R  M  D  Q  R  R  Q  G  S  P  T  N  D  S  S  *  N  *  L  L  L  L  Y  S  S  N  Y  L  W  N  I  G  H  Q  N  L  D  I  S  R  R  G  I  I  L  V  L  V  F  P  F  Y  P  M  I  E  Q  K  K  R  P  I  H  S  F  S  N  Q  G  E  H  Y  *  F  L  I  </second_frame>
            <third_frame>   G  T  K  N  K  S  T  W  F  Q  T  G  Y  N  A  R  S  S  F  P  L  V  F  T  T  Q  K  L  F  *  G  F  T  R  R  K  Q  I  R  D  C  I  K  N  Y  V  Q  K  N  M  R  M  S  S  G  I  E  G  I  A  R  I  E  I  Q  K  R  I  D  L  I  Q  V  I  I  F  M  G  F  P  K  L  L  I  E  S  Q  P  R  E  I  E  E  L  Q  M  T  L  Q  N  E  F  N  C  V  N  R  K  L  N  I  A  V  K  R  I  A  K  P  Y  G  N  P  N  I  L  A  E  F  I  V  G  Q  L  K  N  R  V  S  F  R  K  A  M  K  K  A  I  E  L  T  E  Q  V  Q  I  A  G  R  I  D  G  K  E  I  A  R  V  E  W  I  R  E  G  K  V  P  L  Q  T  I  R  A  K  I  D  Y  C  S  Y  T  V  R  T  I  Y  G  I  L  G  I  K  I  *  I  F  L  D  E  E  *  F  *  Y  L  S  F  P  S  I  Q  *  L  N  K  K  K  D  Q  F  I  L  F  L  I  K  G  N  I  T  N  S  *  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32042" stop="31521"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>519</number_coding_nucleotides>
                  <number_encoded_amino_acids>173</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GFTRRKQIRDCIKNYVQKNMRMSSGIEGIARIEIQKRIDLIQVIIFMGFPKLLIESQPREIEELQMTLQNEFNCVNRKLNIAVKRIAKPYGNPNILAEFIVGQLKNRVSFRKAMKKAIELTEQVQIAGRIDGKEIARVEWIREGKVPLQTIRAKIDYCSYTVRTIYGILGIKI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="33413" PGL_stop="32842"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33413" e_stop="32842"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="33413" e_stop="32842" e_length="572"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33413" stop="32842"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33413" stop="33110"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587546" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCGATATGCCCTTAGGCACGTCCATACATAACATAGAAATCACACTTGGAAAGGGTGGACAATTAGCTAGAGCAGCGGGTGCTGTAGCAAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCAAAAAACTGCTCAGCAACAATCGGACAAGTGGGGAATGTTGGGGTGAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAGCGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTATTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGAGCCCCAATTGGTAGAAAAAAACCCACAACCCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTTCGTCGCCGTAGTAAATAGGAGAGAAAATAGAATTTAATTATTCGTTTTTACAAAAACTTTACAAAAAAAATAGCAGTAAGCTTGTGACACGTTCACTAAAAAAAATCCCTTTGTAGCCAATCATTTATTAAAAAAATTGATAAGCTTAACACAAAA</gDNA_template>
            <first_frame> S  I  C  P  *  A  R  P  Y  I  T  *  K  S  H  L  E  R  V  D  N  *  L  E  Q  R  V  L  *  Q  N  *  L  Q  K  R  G  N  R  P  H  *  N  Y  L  L  G  R  S  V  *  Y  Q  K  T  A  Q  Q  Q  S  D  K  W  G  M  L  G  *  T  R  K  V  W  V  E  P  D  L  S  V  G  *  V  S  V  L  *  *  E  E  Y  L  *  T  L  *  T  I  P  M  G  V  V  K  G  E  P  Q  L  V  E  K  N  P  Q  P  L  G  V  I  L  H  L  E  E  E  V  E  K  G  I  N  I  V  I  I  *  F  F  V  A  V  V  N  R  R  E  N  R  I  *  L  F  V  F  T  K  T  L  Q  K  K  *  Q  *  A  C  D  T  F  T  K  K  N  P  F  V  A  N  H  L  L  K  K  L  I  S  L  T  Q   </first_frame>
            <second_frame>  R  Y  A  L  R  H  V  H  T  *  H  R  N  H  T  W  K  G  W  T  I  S  *  S  S  G  C  C  S  K  T  D  C  K  R  G  E  I  G  H  I  K  I  T  F  W  G  G  P  F  D  I  K  K  L  L  S  N  N  R  T  S  G  E  C  W  G  E  P  E  K  F  G  *  S  R  I  *  A  L  A  R  *  A  S  C  S  K  R  S  I  Y  E  P  C  R  P  S  P  W  G  W  *  R  E  S  P  N  W  *  K  K  T  H  N  P  L  G  L  S  C  T  W  K  K  K  *  K  K  E  *  I  *  *  *  F  D  S  S  S  P  *  *  I  G  E  K  I  E  F  N  Y  S  F  L  Q  K  L  Y  K  K  N  S  S  K  L  V  T  R  S  L  K  K  I  P  L  *  P  I  I  Y  *  K  N  *  *  A  *  H  K  </second_frame>
            <third_frame>   D  M  P  L  G  T  S  I  H  N  I  E  I  T  L  G  K  G  G  Q  L  A  R  A  A  G  A  V  A  K  L  I  A  K  E  G  K  S  A  T  L  K  L  P  S  G  E  V  R  L  I  S  K  N  C  S  A  T  I  G  Q  V  G  N  V  G  V  N  Q  K  S  L  G  R  A  G  S  K  R  W  L  G  K  R  P  V  V  R  G  V  F  M  N  P  V  D  H  P  H  G  G  G  E  G  R  A  P  I  G  R  K  K  P  T  T  P  W  G  Y  P  A  L  G  R  R  S  R  K  R  N  K  Y  S  D  N  L  I  L  R  R  R  S  K  *  E  R  K  *  N  L  I  I  R  F  Y  K  N  F  T  K  K  I  A  V  S  L  *  H  V  H  *  K  K  S  L  C  S  Q  S  F  I  K  K  I  D  K  L  N  T  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33411" stop="32980"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>429</number_coding_nucleotides>
                  <number_encoded_amino_acids>143</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DMPLGTSIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATIGQVGNVGVNQKSLGRAGSKRWLGKRPVVRGVFMNPVDHPHGGGEGRAPIGRKKPTTPWGYPALGRRSRKRNKYSDNLILRRRSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="35794" PGL_stop="36038"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35794" e_stop="36038"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="35794" e_stop="36038" e_length="245"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35794" stop="36038"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571342" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATCCGATCCGCAAGGACCATGATTGGGAATTGTTTGATCGTCTTTCTCTGAGGAAGAGTCGAAATAGAATCAACTTGAATTCGGGACCGCTATTCGAAATCTTAGTGAAACACTGGATTTCTTATCTCATGTCTGCTTTTCGTGAAAAAATACCAATTGAAGTGGTGGGTTTCTTCAAACAACAAGGGGCTGGGTCAATTATTCAATCAAATGATATTGAGCATGTTTACCATCTCTTCTCGAG</gDNA_template>
            <first_frame> D  P  I  R  K  D  H  D  W  E  L  F  D  R  L  S  L  R  K  S  R  N  R  I  N  L  N  S  G  P  L  F  E  I  L  V  K  H  W  I  S  Y  L  M  S  A  F  R  E  K  I  P  I  E  V  V  G  F  F  K  Q  Q  G  A  G  S  I  I  Q  S  N  D  I  E  H  V  Y  H  L  F  S   </first_frame>
            <second_frame>  I  R  S  A  R  T  M  I  G  N  C  L  I  V  F  L  *  G  R  V  E  I  E  S  T  *  I  R  D  R  Y  S  K  S  *  *  N  T  G  F  L  I  S  C  L  L  F  V  K  K  Y  Q  L  K  W  W  V  S  S  N  N  K  G  L  G  Q  L  F  N  Q  M  I  L  S  M  F  T  I  S  S  R  </second_frame>
            <third_frame>   S  D  P  Q  G  P  *  L  G  I  V  *  S  S  F  S  E  E  E  S  K  *  N  Q  L  E  F  G  T  A  I  R  N  L  S  E  T  L  D  F  L  S  H  V  C  F  S  *  K  N  T  N  *  S  G  G  F  L  Q  T  T  R  G  W  V  N  Y  S  I  K  *  Y  *  A  C  L  P  S  L  L  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35794" stop="36036"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DPIRKDHDWELFDRLSLRKSRNRINLNSGPLFEILVKHWISYLMSAFREKIPIEVVGFFKQQGAGSIIQSNDIEHVYHLFS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="36039" PGL_stop="36828"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36039" e_stop="36828"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="36039" e_stop="36828" e_length="790"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36039" stop="36828"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563183" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAACAAGTGGGCTATTTCTTTGCAAAACTGTGCTCAATTTCATATGGGGCAATTCCGCCAAGATCTCTTCGTTAGTTGGGGGAAGAATCTGCCCGAATCGGATTTTTTGAGGAACGTATCGAGAGGGAATTGGATTTGGTTAGACAATGTGTGGTTGGTAAACAAGGATCGGTTTTTTAGCAAGGTACAGAATGTATCGTCAAATATTCAATATGATTCCACAAGATCTAGTTTCGTTCAAGTAACGGATTCTAGCCAACTGAAAGGATCTTCTGATCAATCCAGAGATCATTTGGATTCCATCATTAATGAGGATTCGGAATATCACACATTGATTAATCAAAGAGAGATTCAACAACGAAAAGAAAGATCGATTCTTTGGGATCCTTCCTTTCTTCAAACGGAACGAAAAGAGATAGAATCAGGCCGATCCCCGAAATGCCTTTCTGGATATTCCTCAATGTCCCGGCTATTCACGGAACGTGAGAAGCAGATGATTAATTATCTGTTTCCGGAAGAAATCGAAGAATTTCTTGGGAATCCTACAAGATCCGTTCGTTCTTTTTTCTCTGATAGATGGTCAGAACTTCATCTAGGTTCGAATCCTACTGAGAGGTCCACTAGAGATCAGAAATTGTTGAAGAAACAACAAGATCTTTCTTTTGTCCCTTCTAGGCGATCGGAAAAGAAAGAAATGGTTAATATATTCATGATAATTACGTATTTACAAAATACCATCTCAATTCATCCTATTTCATCAGATCCGGGATGTGATATGGTTCCGAAGGAT</gDNA_template>
            <first_frame> K  Q  V  G  Y  F  F  A  K  L  C  S  I  S  Y  G  A  I  P  P  R  S  L  R  *  L  G  E  E  S  A  R  I  G  F  F  E  E  R  I  E  R  E  L  D  L  V  R  Q  C  V  V  G  K  Q  G  S  V  F  *  Q  G  T  E  C  I  V  K  Y  S  I  *  F  H  K  I  *  F  R  S  S  N  G  F  *  P  T  E  R  I  F  *  S  I  Q  R  S  F  G  F  H  H  *  *  G  F  G  I  S  H  I  D  *  S  K  R  D  S  T  T  K  R  K  I  D  S  L  G  S  F  L  S  S  N  G  T  K  R  D  R  I  R  P  I  P  E  M  P  F  W  I  F  L  N  V  P  A  I  H  G  T  *  E  A  D  D  *  L  S  V  S  G  R  N  R  R  I  S  W  E  S  Y  K  I  R  S  F  F  F  L  *  *  M  V  R  T  S  S  R  F  E  S  Y  *  E  V  H  *  R  S  E  I  V  E  E  T  T  R  S  F  F  C  P  F  *  A  I  G  K  E  R  N  G  *  Y  I  H  D  N  Y  V  F  T  K  Y  H  L  N  S  S  Y  F  I  R  S  G  M  *  Y  G  S  E  G  </first_frame>
            <second_frame>  N  K  W  A  I  S  L  Q  N  C  A  Q  F  H  M  G  Q  F  R  Q  D  L  F  V  S  W  G  K  N  L  P  E  S  D  F  L  R  N  V  S  R  G  N  W  I  W  L  D  N  V  W  L  V  N  K  D  R  F  F  S  K  V  Q  N  V  S  S  N  I  Q  Y  D  S  T  R  S  S  F  V  Q  V  T  D  S  S  Q  L  K  G  S  S  D  Q  S  R  D  H  L  D  S  I  I  N  E  D  S  E  Y  H  T  L  I  N  Q  R  E  I  Q  Q  R  K  E  R  S  I  L  W  D  P  S  F  L  Q  T  E  R  K  E  I  E  S  G  R  S  P  K  C  L  S  G  Y  S  S  M  S  R  L  F  T  E  R  E  K  Q  M  I  N  Y  L  F  P  E  E  I  E  E  F  L  G  N  P  T  R  S  V  R  S  F  F  S  D  R  W  S  E  L  H  L  G  S  N  P  T  E  R  S  T  R  D  Q  K  L  L  K  K  Q  Q  D  L  S  F  V  P  S  R  R  S  E  K  K  E  M  V  N  I  F  M  I  I  T  Y  L  Q  N  T  I  S  I  H  P  I  S  S  D  P  G  C  D  M  V  P  K  D </second_frame>
            <third_frame>   T  S  G  L  F  L  C  K  T  V  L  N  F  I  W  G  N  S  A  K  I  S  S  L  V  G  G  R  I  C  P  N  R  I  F  *  G  T  Y  R  E  G  I  G  F  G  *  T  M  C  G  W  *  T  R  I  G  F  L  A  R  Y  R  M  Y  R  Q  I  F  N  M  I  P  Q  D  L  V  S  F  K  *  R  I  L  A  N  *  K  D  L  L  I  N  P  E  I  I  W  I  P  S  L  M  R  I  R  N  I  T  H  *  L  I  K  E  R  F  N  N  E  K  K  D  R  F  F  G  I  L  P  F  F  K  R  N  E  K  R  *  N  Q  A  D  P  R  N  A  F  L  D  I  P  Q  C  P  G  Y  S  R  N  V  R  S  R  *  L  I  I  C  F  R  K  K  S  K  N  F  L  G  I  L  Q  D  P  F  V  L  F  S  L  I  D  G  Q  N  F  I  *  V  R  I  L  L  R  G  P  L  E  I  R  N  C  *  R  N  N  K  I  F  L  L  S  L  L  G  D  R  K  R  K  K  W  L  I  Y  S  *  *  L  R  I  Y  K  I  P  S  Q  F  I  L  F  H  Q  I  R  D  V  I  W  F  R  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36040" stop="36828"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>789</number_coding_nucleotides>
                  <number_encoded_amino_acids>263</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKWAISLQNCAQFHMGQFRQDLFVSWGKNLPESDFLRNVSRGNWIWLDNVWLVNKDRFFSKVQNVSSNIQYDSTRSSFVQVTDSSQLKGSSDQSRDHLDSIINEDSEYHTLINQREIQQRKERSILWDPSFLQTERKEIESGRSPKCLSGYSSMSRLFTEREKQMINYLFPEEIEEFLGNPTRSVRSFFSDRWSELHLGSNPTERSTRDQKLLKKQQDLSFVPSRRSEKKEMVNIFMIITYLQNTISIHPISSDPGCDMVPKD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="-" PGL_start="38177" PGL_stop="36340"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38177" e_stop="36340"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.930"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.930">
            <gDNA_exon_boundary e_start="38177" e_stop="36340" e_length="1838"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38177" stop="36885"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571569" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36892" stop="36340"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586752" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAGTGATGTGGATTATTCAAGAATCGAAGTCGATTTGCTTTATAAAAAGAAGATATCAATGAACTTCTATGAAATGGTTTCACGGGATTCAACCAATTGTCTTGATCGTGGAATATCATTGAGAAATAGGAATCCGGGTTATCAAAGGATTTCCTGCGATTATTTCTAGTATGGAATGAGTCAATCATCCACTTTGGTATCTTATTGAACAAAAATGGTGATATTGTTCCTCCATTGATCAAGAATTTCGATTTTTGGGAAGTATCATGATCGTCCAATAAGAAGGGTTTCAATTTTTTCAAATGAACAATTTGAAGACCTATTGATTCTAACAACTGATTGCAGAGTTGATCATTTGGACCTTTCAATTCTTCATAGATGTAGATATCGGACCTATGAATGGGGATATTTCCGAAACTCATACAGAAAAAACGAAGTGAGTTAGACAAAAATAAAAGCAACTTGGACAAAAAAAAGAAGTGACTTGGACAAAAAGAAACGAACTGACTTAGACAAATCTTTTTTGTCGATAACCTCAAACCAATCAATCGAATATTGATTAATACGTAATCGATCGAACACTACTTGAAAACGGCTCTTCTGCTTCGAAACGGACTGTTCCAAATGTTCCTGGAAACTCTTGCTCTCATTGGACCATTTGTATCTATATGCATCAGGATCCCGATTCATGGATCTCTCGGTTCGAGAAATCAAAATAAGAGGCTCGAACCATTTCTTCTGACTCTTTTTCAGTTCTATGATTCAGAGTATCCTTTCCTATTTGATCCCTTTGAATTCCATATTCGAAGTTGCGATCGGATCTATTCATTAAAAAGAATCGATTCAATACATTTCTTATGTACCCATAGGTACTATATTGGATTTGAATCAGATTTCGGATCAATCTATATTGAGTGACTGCCTCCATTATGTTGTTGCTAGCAAATACCACTATTTTTGGTTTTGGATCTTCCAAATCATTCCCGCAGGAGATCCTGACCCATTTTTTTCTGATCCTTCGAGAAAAAGATTCATTCTCTTCATAAAAAATAGGAGGTAGAACCAATAAAGATTTCTTTTTCGATTAATCCCTGGCCTCATTAAAGAATTGTTTTTGATCCAATCCGCAGGAATCAATAGAAAAGGCAAATCCCTTATGATACACCAGATCCAGCTCGGTTATTGATAGAGTGAATAGATCTGCCATTTCTTGAAATCTCTCTTCTGATGCAAAATCGTAGTGTAACGTGTATACTCCCCTGTTCCGGTCATGGAATAGATGAAATAAATCAAAAAATGGATTTTTGTTCAAGAATGAAATCTTATTGGAACTGCCCATATCCGGTTCATCCTTCGGAACCATATCACATCCCGGATCTGATGAAATAGGATGAATTGAGATGGTATTTTGTAAATACGTAATTATCATGAATATATTAACCATTTCTTTCTTTTCCGATCGCCTAGAAGGGACAAAAGAAAGATCTTGTTGTTTCTTCAACAATTTCTGATCTCTAGTGGACCTCTCAGTAGGATTCGAACCTAGATGAAGTTCTGACCATCTATCAGAGAAAAAAGAACGAACGGATCTTGTAGGATTCCCAAGAAATTCTTCGATTTCTTCCGGAAACAGATAATTAATCATCTGCTTCTCACGTTCCGTGAATAGCCGGGACATTGAGGAATATCCAGAAAGGCATTTCGGGGATCGGCCTGATTCTATCTCTTTTCGTTCCGTTTGAAGAAAGGAAGGATCCCAAAGAATCGATCTTTCTTTTCGTTGTTGAATCTCTCTTTGATTAATCAATGTGTGATATTCCGAATCCTCATTAATGAT</gDNA_template>
            <first_frame> E  V  M  W  I  I  Q  E  S  K  S  I  C  F  I  K  R  R  Y  Q  *  T  S  M  K  W  F  H  G  I  Q  P  I  V  L  I  V  E  Y  H  *  E  I  G  I  R  V  I  K  G  F  P  A  I  I  S  S  M  E  *  V  N  H  P  L  W  Y  L  I  E  Q  K  W  *  Y  C  S  S  I  D  Q  E  F  R  F  L  G  S  I  M  I  V  Q  *  E  G  F  Q  F  F  Q  M  N  N  L  K  T  Y  *  F  *  Q  L  I  A  E  L  I  I  W  T  F  Q  F  F  I  D  V  D  I  G  P  M  N  G  D  I  S  E  T  H  T  E  K  T  K  *  V  R  Q  K  *  K  Q  L  G  Q  K  K  E  V  T  W  T  K  R  N  E  L  T  *  T  N  L  F  C  R  *  P  Q  T  N  Q  S  N  I  D  *  Y  V  I  D  R  T  L  L  E  N  G  S  S  A  S  K  R  T  V  P  N  V  P  G  N  S  C  S  H  W  T  I  C  I  Y  M  H  Q  D  P  D  S  W  I  S  R  F  E  K  S  K  *  E  A  R  T  I  S  S  D  S  F  S  V  L  *  F  R  V  S  F  P  I  *  S  L  *  I  P  Y  S  K  L  R  S  D  L  F  I  K  K  N  R  F  N  T  F  L  M  Y  P  *  V  L  Y  W  I  *  I  R  F  R  I  N  L  Y  *  V  T  A  S  I  M  L  L  L  A  N  T  T  I  F  G  F  G  S  S  K  S  F  P  Q  E  I  L  T  H  F  F  L  I  L  R  E  K  D  S  F  S  S  *  K  I  G  G  R  T  N  K  D  F  F  F  D  *  S  L  A  S  L  K  N  C  F  *  S  N  P  Q  E  S  I  E  K  A  N  P  L  *  Y  T  R  S  S  S  V  I  D  R  V  N  R  S  A  I  S  *  N  L  S  S  D  A  K  S  *  C  N  V  Y  T  P  L  F  R  S  W  N  R  *  N  K  S  K  N  G  F  L  F  K  N  E  I  L  L  E  L  P  I  S  G  S  S  F  G  T  I  S  H  P  G  S  D  E  I  G  *  I  E  M  V  F  C  K  Y  V  I  I  M  N  I  L  T  I  S  F  F  S  D  R  L  E  G  T  K  E  R  S  C  C  F  F  N  N  F  *  S  L  V  D  L  S  V  G  F  E  P  R  *  S  S  D  H  L  S  E  K  K  E  R  T  D  L  V  G  F  P  R  N  S  S  I  S  S  G  N  R  *  L  I  I  C  F  S  R  S  V  N  S  R  D  I  E  E  Y  P  E  R  H  F  G  D  R  P  D  S  I  S  F  R  S  V  *  R  K  E  G  S  Q  R  I  D  L  S  F  R  C  *  I  S  L  *  L  I  N  V  *  Y  S  E  S  S  L  M   </first_frame>
            <second_frame>  K  *  C  G  L  F  K  N  R  S  R  F  A  L  *  K  E  D  I  N  E  L  L  *  N  G  F  T  G  F  N  Q  L  S  *  S  W  N  I  I  E  K  *  E  S  G  L  S  K  D  F  L  R  L  F  L  V  W  N  E  S  I  I  H  F  G  I  L  L  N  K  N  G  D  I  V  P  P  L  I  K  N  F  D  F  W  E  V  S  *  S  S  N  K  K  G  F  N  F  F  K  *  T  I  *  R  P  I  D  S  N  N  *  L  Q  S  *  S  F  G  P  F  N  S  S  *  M  *  I  S  D  L  *  M  G  I  F  P  K  L  I  Q  K  K  R  S  E  L  D  K  N  K  S  N  L  D  K  K  K  K  *  L  G  Q  K  E  T  N  *  L  R  Q  I  F  F  V  D  N  L  K  P  I  N  R  I  L  I  N  T  *  S  I  E  H  Y  L  K  T  A  L  L  L  R  N  G  L  F  Q  M  F  L  E  T  L  A  L  I  G  P  F  V  S  I  C  I  R  I  P  I  H  G  S  L  G  S  R  N  Q  N  K  R  L  E  P  F  L  L  T  L  F  Q  F  Y  D  S  E  Y  P  F  L  F  D  P  F  E  F  H  I  R  S  C  D  R  I  Y  S  L  K  R  I  D  S  I  H  F  L  C  T  H  R  Y  Y  I  G  F  E  S  D  F  G  S  I  Y  I  E  *  L  P  P  L  C  C  C  *  Q  I  P  L  F  L  V  L  D  L  P  N  H  S  R  R  R  S  *  P  I  F  F  *  S  F  E  K  K  I  H  S  L  H  K  K  *  E  V  E  P  I  K  I  S  F  S  I  N  P  W  P  H  *  R  I  V  F  D  P  I  R  R  N  Q  *  K  R  Q  I  P  Y  D  T  P  D  P  A  R  L  L  I  E  *  I  D  L  P  F  L  E  I  S  L  L  M  Q  N  R  S  V  T  C  I  L  P  C  S  G  H  G  I  D  E  I  N  Q  K  M  D  F  C  S  R  M  K  S  Y  W  N  C  P  Y  P  V  H  P  S  E  P  Y  H  I  P  D  L  M  K  *  D  E  L  R  W  Y  F  V  N  T  *  L  S  *  I  Y  *  P  F  L  S  F  P  I  A  *  K  G  Q  K  K  D  L  V  V  S  S  T  I  S  D  L  *  W  T  S  Q  *  D  S  N  L  D  E  V  L  T  I  Y  Q  R  K  K  N  E  R  I  L  *  D  S  Q  E  I  L  R  F  L  P  E  T  D  N  *  S  S  A  S  H  V  P  *  I  A  G  T  L  R  N  I  Q  K  G  I  S  G  I  G  L  I  L  S  L  F  V  P  F  E  E  R  K  D  P  K  E  S  I  F  L  F  V  V  E  S  L  F  D  *  S  M  C  D  I  P  N  P  H  *  *  </second_frame>
            <third_frame>   S  D  V  D  Y  S  R  I  E  V  D  L  L  Y  K  K  K  I  S  M  N  F  Y  E  M  V  S  R  D  S  T  N  C  L  D  R  G  I  S  L  R  N  R  N  P  G  Y  Q  R  I  S  C  D  Y  F  *  Y  G  M  S  Q  S  S  T  L  V  S  Y  *  T  K  M  V  I  L  F  L  H  *  S  R  I  S  I  F  G  K  Y  H  D  R  P  I  R  R  V  S  I  F  S  N  E  Q  F  E  D  L  L  I  L  T  T  D  C  R  V  D  H  L  D  L  S  I  L  H  R  C  R  Y  R  T  Y  E  W  G  Y  F  R  N  S  Y  R  K  N  E  V  S  *  T  K  I  K  A  T  W  T  K  K  R  S  D  L  D  K  K  K  R  T  D  L  D  K  S  F  L  S  I  T  S  N  Q  S  I  E  Y  *  L  I  R  N  R  S  N  T  T  *  K  R  L  F  C  F  E  T  D  C  S  K  C  S  W  K  L  L  L  S  L  D  H  L  Y  L  Y  A  S  G  S  R  F  M  D  L  S  V  R  E  I  K  I  R  G  S  N  H  F  F  *  L  F  F  S  S  M  I  Q  S  I  L  S  Y  L  I  P  L  N  S  I  F  E  V  A  I  G  S  I  H  *  K  E  S  I  Q  Y  I  S  Y  V  P  I  G  T  I  L  D  L  N  Q  I  S  D  Q  S  I  L  S  D  C  L  H  Y  V  V  A  S  K  Y  H  Y  F  W  F  W  I  F  Q  I  I  P  A  G  D  P  D  P  F  F  S  D  P  S  R  K  R  F  I  L  F  I  K  N  R  R  *  N  Q  *  R  F  L  F  R  L  I  P  G  L  I  K  E  L  F  L  I  Q  S  A  G  I  N  R  K  G  K  S  L  M  I  H  Q  I  Q  L  G  Y  *  *  S  E  *  I  C  H  F  L  K  S  L  F  *  C  K  I  V  V  *  R  V  Y  S  P  V  P  V  M  E  *  M  K  *  I  K  K  W  I  F  V  Q  E  *  N  L  I  G  T  A  H  I  R  F  I  L  R  N  H  I  T  S  R  I  *  *  N  R  M  N  *  D  G  I  L  *  I  R  N  Y  H  E  Y  I  N  H  F  F  L  F  R  S  P  R  R  D  K  R  K  I  L  L  F  L  Q  Q  F  L  I  S  S  G  P  L  S  R  I  R  T  *  M  K  F  *  P  S  I  R  E  K  R  T  N  G  S  C  R  I  P  K  K  F  F  D  F  F  R  K  Q  I  I  N  H  L  L  L  T  F  R  E  *  P  G  H  *  G  I  S  R  K  A  F  R  G  S  A  *  F  Y  L  F  S  F  R  L  K  K  G  R  I  P  K  N  R  S  F  F  S  L  L  N  L  S  L  I  N  Q  C  V  I  F  R  I  L  I  N  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37606" stop="37259"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>345</number_coding_nucleotides>
                  <number_encoded_amino_acids>115</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIEHYLKTALLLRNGLFQMFLETLALIGPFVSICIRIPIHGSLGSRNQNKRLEPFLLTLFQFYDSEYPFLFDPFEFHIRSCDRIYSLKRIDSIHFLCTHRYYIGFESDFGSIYIE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37938" stop="37732"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRISIFGKYHDRPIRRVSIFSNEQFEDLLILTTDCRVDHLDLSILHRCRYRTYEWGYFRNSYRKNEVS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36982" stop="36788"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IDLPFLEISLLMQNRSVTCILPCSGHGIDEINQKMDFCSRMKSYWNCPYPVHPSEPYHIPDLMK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="+" PGL_start="38271" PGL_stop="39777"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38271" e_stop="39777"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.975"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.975">
            <gDNA_exon_boundary e_start="38271" e_stop="39777" e_length="1507"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38271" stop="39777"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571858" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCATTTGCAAAAAAATATTTTCTTTGTGCGTCGGTAAAAAAACATGCTTTTTGGGGGAGAGATACTATTTCACCAATCGAGTCACAGGTATCTAACATATTCATACCTAACGATTTTCCACAAAGTGGTGACGAAACGTATACCTTGTACAAATCTTTCCATTTTCCAAGTCGATCCGATCCATTCGTTCGTAGAGCTATTTACTCAATCGCAGACATTTCTGGAACACCTCTAACAGAGGGGCAAATAGTCAATTTTGAAAGAACTTATTGTCAACCTCTTTCAAATATGAATCTATCTGATTCAGAAGGGAAGAACTTGCATCAGTATCTCAATTTAGGTTAGGACATGGGTTTGATTCACACTACATGTTCTGAGAAAGATTTATCATCCGAAAAGAGGAAAAAATGGAGTCTTTGTCTAAAGAAATGCGTTGAGAAAGGGCAGACGTATAGAACCTTTCAACGAGATAGTGCTTTTTTAACTCTCTCAAAATGGAATCTATTCCAAACATATATGCCATGGTTCCTTACTTCGACAGGGTACAAATATCTAAATTTGATATATTTAGATACTTTTTCAGACCTATTGCCAATACTAAGTAGCAGTCAAAAATTTGTATCCATTTTTCCTGATATTATGCATGGATCAGGTATATCATGCGAATTCTTCAGAAAAAATTGTGTCTTCCTCAATGGAATCTGATAAGTGAGATCTCGAGTAGGTGTTTACATAATCTTCTTCTGTCCGAAGAAATGATTCATCGAAATAATGAGTCACCTTTGATATCGACACATCTGAGATCGCCAAATGCTCGGGAGTTCCTCTATTCAATCCTTTTCCTTCTTCTTGTTGCTGGATATCTCGTTCGTACACATCTTCTCTTTGTTTCCAAGGCCTCTAGTGAGTTACAGATAGAGTTCGAAAGGGTAAAATCTTTGATGACTCCATCATCTATGATTGAGTTGCGAAAACTTCTGCATAGGTATCCTACATCTGAACCGAATTCTTTTTGGTTAAAGAATCTCTTTCTAGTTGCTCTGGAACAATTAGGAGATTCTCTAGAAGAAATACGGGGTTCTGCTTCTGGCGGCAACATGCTTGGTCCCGCTTATGGGGTCAAATCAATACGTTCTAAGAAGAAAGATTGGAATATCAATCTCATCTAGATCATCGATCTCATACCAAATCCCATCAATAGAATCACTTTTTTGAGAAATACGAGACATCTAAGTCATACAAGTAAAGAGATCTATTCATTGATAAGAAAAAGAAAAAACGTGAAAGGGGATTGGATTGATGAGAAAATAGAATCCTGGGTCGCAAACAGTGATTCGATTGATGATGAAGAAAGAGAATTCTTGGTTGAGTTCTCCACCTTAACGACAGAAAATAGGATTGATCAAATTCTATTGAGTCTGACTCATAGTGATCATTTATCAAAGAATGACTCTGTTTATCAAATGATTGAACAACCGGGAGCAATTTACTTACGATACTTACTTG</gDNA_template>
            <first_frame> F  I  C  K  K  I  F  S  L  C  V  G  K  K  T  C  F  L  G  E  R  Y  Y  F  T  N  R  V  T  G  I  *  H  I  H  T  *  R  F  S  T  K  W  *  R  N  V  Y  L  V  Q  I  F  P  F  S  K  S  I  R  S  I  R  S  *  S  Y  L  L  N  R  R  H  F  W  N  T  S  N  R  G  A  N  S  Q  F  *  K  N  L  L  S  T  S  F  K  Y  E  S  I  *  F  R  R  E  E  L  A  S  V  S  Q  F  R  L  G  H  G  F  D  S  H  Y  M  F  *  E  R  F  I  I  R  K  E  E  K  M  E  S  L  S  K  E  M  R  *  E  R  A  D  V  *  N  L  S  T  R  *  C  F  F  N  S  L  K  M  E  S  I  P  N  I  Y  A  M  V  P  Y  F  D  R  V  Q  I  S  K  F  D  I  F  R  Y  F  F  R  P  I  A  N  T  K  *  Q  S  K  I  C  I  H  F  S  *  Y  Y  A  W  I  R  Y  I  M  R  I  L  Q  K  K  L  C  L  P  Q  W  N  L  I  S  E  I  S  S  R  C  L  H  N  L  L  L  S  E  E  M  I  H  R  N  N  E  S  P  L  I  S  T  H  L  R  S  P  N  A  R  E  F  L  Y  S  I  L  F  L  L  L  V  A  G  Y  L  V  R  T  H  L  L  F  V  S  K  A  S  S  E  L  Q  I  E  F  E  R  V  K  S  L  M  T  P  S  S  M  I  E  L  R  K  L  L  H  R  Y  P  T  S  E  P  N  S  F  W  L  K  N  L  F  L  V  A  L  E  Q  L  G  D  S  L  E  E  I  R  G  S  A  S  G  G  N  M  L  G  P  A  Y  G  V  K  S  I  R  S  K  K  K  D  W  N  I  N  L  I  *  I  I  D  L  I  P  N  P  I  N  R  I  T  F  L  R  N  T  R  H  L  S  H  T  S  K  E  I  Y  S  L  I  R  K  R  K  N  V  K  G  D  W  I  D  E  K  I  E  S  W  V  A  N  S  D  S  I  D  D  E  E  R  E  F  L  V  E  F  S  T  L  T  T  E  N  R  I  D  Q  I  L  L  S  L  T  H  S  D  H  L  S  K  N  D  S  V  Y  Q  M  I  E  Q  P  G  A  I  Y  L  R  Y  L  L  </first_frame>
            <second_frame>  S  F  A  K  K  Y  F  L  C  A  S  V  K  K  H  A  F  W  G  R  D  T  I  S  P  I  E  S  Q  V  S  N  I  F  I  P  N  D  F  P  Q  S  G  D  E  T  Y  T  L  Y  K  S  F  H  F  P  S  R  S  D  P  F  V  R  R  A  I  Y  S  I  A  D  I  S  G  T  P  L  T  E  G  Q  I  V  N  F  E  R  T  Y  C  Q  P  L  S  N  M  N  L  S  D  S  E  G  K  N  L  H  Q  Y  L  N  L  G  *  D  M  G  L  I  H  T  T  C  S  E  K  D  L  S  S  E  K  R  K  K  W  S  L  C  L  K  K  C  V  E  K  G  Q  T  Y  R  T  F  Q  R  D  S  A  F  L  T  L  S  K  W  N  L  F  Q  T  Y  M  P  W  F  L  T  S  T  G  Y  K  Y  L  N  L  I  Y  L  D  T  F  S  D  L  L  P  I  L  S  S  S  Q  K  F  V  S  I  F  P  D  I  M  H  G  S  G  I  S  C  E  F  F  R  K  N  C  V  F  L  N  G  I  *  *  V  R  S  R  V  G  V  Y  I  I  F  F  C  P  K  K  *  F  I  E  I  M  S  H  L  *  Y  R  H  I  *  D  R  Q  M  L  G  S  S  S  I  Q  S  F  S  F  F  L  L  L  D  I  S  F  V  H  I  F  S  L  F  P  R  P  L  V  S  Y  R  *  S  S  K  G  *  N  L  *  *  L  H  H  L  *  L  S  C  E  N  F  C  I  G  I  L  H  L  N  R  I  L  F  G  *  R  I  S  F  *  L  L  W  N  N  *  E  I  L  *  K  K  Y  G  V  L  L  L  A  A  T  C  L  V  P  L  M  G  S  N  Q  Y  V  L  R  R  K  I  G  I  S  I  S  S  R  S  S  I  S  Y  Q  I  P  S  I  E  S  L  F  *  E  I  R  D  I  *  V  I  Q  V  K  R  S  I  H  *  *  E  K  E  K  T  *  K  G  I  G  L  M  R  K  *  N  P  G  S  Q  T  V  I  R  L  M  M  K  K  E  N  S  W  L  S  S  P  P  *  R  Q  K  I  G  L  I  K  F  Y  *  V  *  L  I  V  I  I  Y  Q  R  M  T  L  F  I  K  *  L  N  N  R  E  Q  F  T  Y  D  T  Y  L </second_frame>
            <third_frame>   H  L  Q  K  N  I  F  F  V  R  R  *  K  N  M  L  F  G  G  E  I  L  F  H  Q  S  S  H  R  Y  L  T  Y  S  Y  L  T  I  F  H  K  V  V  T  K  R  I  P  C  T  N  L  S  I  F  Q  V  D  P  I  H  S  F  V  E  L  F  T  Q  S  Q  T  F  L  E  H  L  *  Q  R  G  K  *  S  I  L  K  E  L  I  V  N  L  F  Q  I  *  I  Y  L  I  Q  K  G  R  T  C  I  S  I  S  I  *  V  R  T  W  V  *  F  T  L  H  V  L  R  K  I  Y  H  P  K  R  G  K  N  G  V  F  V  *  R  N  A  L  R  K  G  R  R  I  E  P  F  N  E  I  V  L  F  *  L  S  Q  N  G  I  Y  S  K  H  I  C  H  G  S  L  L  R  Q  G  T  N  I  *  I  *  Y  I  *  I  L  F  Q  T  Y  C  Q  Y  *  V  A  V  K  N  L  Y  P  F  F  L  I  L  C  M  D  Q  V  Y  H  A  N  S  S  E  K  I  V  S  S  S  M  E  S  D  K  *  D  L  E  *  V  F  T  *  S  S  S  V  R  R  N  D  S  S  K  *  *  V  T  F  D  I  D  T  S  E  I  A  K  C  S  G  V  P  L  F  N  P  F  P  S  S  C  C  W  I  S  R  S  Y  T  S  S  L  C  F  Q  G  L  *  *  V  T  D  R  V  R  K  G  K  I  F  D  D  S  I  I  Y  D  *  V  A  K  T  S  A  *  V  S  Y  I  *  T  E  F  F  L  V  K  E  S  L  S  S  C  S  G  T  I  R  R  F  S  R  R  N  T  G  F  C  F  W  R  Q  H  A  W  S  R  L  W  G  Q  I  N  T  F  *  E  E  R  L  E  Y  Q  S  H  L  D  H  R  S  H  T  K  S  H  Q  *  N  H  F  F  E  K  Y  E  T  S  K  S  Y  K  *  R  D  L  F  I  D  K  K  K  K  K  R  E  R  G  L  D  *  *  E  N  R  I  L  G  R  K  Q  *  F  D  *  *  *  R  K  R  I  L  G  *  V  L  H  L  N  D  R  K  *  D  *  S  N  S  I  E  S  D  S  *  *  S  F  I  K  E  *  L  C  L  S  N  D  *  T  T  G  S  N  L  L  T  I  L  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="+"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38907" stop="39440"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>531</number_coding_nucleotides>
                  <number_encoded_amino_acids>177</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YYAWIRYIMRILQKKLCLPQWNLISEISSRCLHNLLLSEEMIHRNNESPLISTHLRSPNAREFLYSILFLLLVAGYLVRTHLLFVSKASSELQIEFERVKSLMTPSSMIELRKLLHRYPTSEPNSFWLKNLFLVALEQLGDSLEEIRGSASGGNMLGPAYGVKSIRSKKKDWNINLI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="+"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38272" stop="38616"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>342</number_coding_nucleotides>
                  <number_encoded_amino_acids>114</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFAKKYFLCASVKKHAFWGRDTISPIESQVSNIFIPNDFPQSGDETYTLYKSFHFPSRSDPFVRRAIYSIADISGTPLTEGQIVNFERTYCQPLSNMNLSDSEGKNLHQYLNLG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="+"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="39441" stop="39776"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>336</number_coding_nucleotides>
                  <number_encoded_amino_acids>112</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IIDLIPNPINRITFLRNTRHLSHTSKEIYSLIRKRKNVKGDWIDEKIESWVANSDSIDDEEREFLVEFSTLTTENRIDQILLSLTHSDHLSKNDSVYQMIEQPGAIYLRYLL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="-" PGL_start="41780" PGL_stop="40669"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41780" e_stop="40669"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.952"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.952">
            <gDNA_exon_boundary e_start="41780" e_stop="40669" e_length="1112"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41780" stop="40669"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576618" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACGGAAAGATCGATTAGATAATGAACTATTGGTTCTAAGCCATCTCTGACGATTAATCAACAATTCGAAGTGCTTTTCTTGCGTATTCTTGATAAACCAGCGTTTATATAGAGATGTAGGAGGATCTCTTTGGGAAGTAAGAAGCCCCTTTTACATCTCTTCATCTGCAAATAATTCTCGATGTGAAAACACAGAGCCAGGGGGCTGATCTTTGAATAGGAAAATGAGTGGATCTGTAGGGTCCCAAATGAATTGGCTTATTCGAAAAAGGCCTTGAGATCTATCTCGTGTCTGGTACTGCATGGTTCCACTCTGCAAGAACCCCGAATCATTCTCTTGAAGCTCATCCTCTTCATCATAAATGATCCGCTTGCCCCGAAATAACCTGGACCAATAGGGAAATCCCAATTCATTGGGCGTTTCGATACAATCAAATACAAAGCCCCAAGGGCGCCATATTCTAGGAGCCCAAACTATGTGATTGAATAAATCCTCTTGCGGGTCGAGGGCTCCTTCTCCCTCCCCTTCTTCAAACTCCGATTCATATTTTTCATAGAGAAATCTCTGATCAAGGATAGACCAAGAGCCCTTTTGCATCATATCTAAGGGATTCCTCGGTTCGGGCCGAAGAAGCAATGTCACTCGATCATTATCAAACTGACTGCAATCTTTTTCTGTCCGTGAAGATCCCACCAGAGCGCCCTCTACTTCTAATAGGCCATGAACTAGATCAGAATCATTCTCAACGAATCCATAAGAAGTGATCCCATTTTTTTCATCGGGTACAGATAAAGACCAAAGATCTTGAGCGACCGATCCGGCAGAACAACTCAAAAGATAAAGAAGTATCGTTAATCTCTTCATGCTCGTTCCAAGCTCGAAGTACCATTTGCACAAATAAGAATCCCCTTCGTTACATGATTTCTTCTTTATATAGATAGATATAGGATCTATAGGGCAATTACTTAGAAGTACATTTTGTGCTACAGCCCTTCCTATCCGATAGAAACGGATCCCATGATCCTGAACCGATCTTACCTGGGATCACAAATCCCAAGTTGTCTATGAAGAGCGGATCTAATTGTATTAGTGTCTATAATTGATTTCTTCT</gDNA_template>
            <first_frame> N  G  K  I  D  *  I  M  N  Y  W  F  *  A  I  S  D  D  *  S  T  I  R  S  A  F  L  A  Y  S  *  *  T  S  V  Y  I  E  M  *  E  D  L  F  G  K  *  E  A  P  F  T  S  L  H  L  Q  I  I  L  D  V  K  T  Q  S  Q  G  A  D  L  *  I  G  K  *  V  D  L  *  G  P  K  *  I  G  L  F  E  K  G  L  E  I  Y  L  V  S  G  T  A  W  F  H  S  A  R  T  P  N  H  S  L  E  A  H  P  L  H  H  K  *  S  A  C  P  E  I  T  W  T  N  R  E  I  P  I  H  W  A  F  R  Y  N  Q  I  Q  S  P  K  G  A  I  F  *  E  P  K  L  C  D  *  I  N  P  L  A  G  R  G  L  L  L  P  P  L  L  Q  T  P  I  H  I  F  H  R  E  I  S  D  Q  G  *  T  K  S  P  F  A  S  Y  L  R  D  S  S  V  R  A  E  E  A  M  S  L  D  H  Y  Q  T  D  C  N  L  F  L  S  V  K  I  P  P  E  R  P  L  L  L  I  G  H  E  L  D  Q  N  H  S  Q  R  I  H  K  K  *  S  H  F  F  H  R  V  Q  I  K  T  K  D  L  E  R  P  I  R  Q  N  N  S  K  D  K  E  V  S  L  I  S  S  C  S  F  Q  A  R  S  T  I  C  T  N  K  N  P  L  R  Y  M  I  S  S  L  Y  R  *  I  *  D  L  *  G  N  Y  L  E  V  H  F  V  L  Q  P  F  L  S  D  R  N  G  S  H  D  P  E  P  I  L  P  G  I  T  N  P  K  L  S  M  K  S  G  S  N  C  I  S  V  Y  N  *  F  L   </first_frame>
            <second_frame>  T  E  R  S  I  R  *  *  T  I  G  S  K  P  S  L  T  I  N  Q  Q  F  E  V  L  F  L  R  I  L  D  K  P  A  F  I  *  R  C  R  R  I  S  L  G  S  K  K  P  L  L  H  L  F  I  C  K  *  F  S  M  *  K  H  R  A  R  G  L  I  F  E  *  E  N  E  W  I  C  R  V  P  N  E  L  A  Y  S  K  K  A  L  R  S  I  S  C  L  V  L  H  G  S  T  L  Q  E  P  R  I  I  L  L  K  L  I  L  F  I  I  N  D  P  L  A  P  K  *  P  G  P  I  G  K  S  Q  F  I  G  R  F  D  T  I  K  Y  K  A  P  R  A  P  Y  S  R  S  P  N  Y  V  I  E  *  I  L  L  R  V  E  G  S  F  S  L  P  F  F  K  L  R  F  I  F  F  I  E  K  S  L  I  K  D  R  P  R  A  L  L  H  H  I  *  G  I  P  R  F  G  P  K  K  Q  C  H  S  I  I  I  K  L  T  A  I  F  F  C  P  *  R  S  H  Q  S  A  L  Y  F  *  *  A  M  N  *  I  R  I  I  L  N  E  S  I  R  S  D  P  I  F  F  I  G  Y  R  *  R  P  K  I  L  S  D  R  S  G  R  T  T  Q  K  I  K  K  Y  R  *  S  L  H  A  R  S  K  L  E  V  P  F  A  Q  I  R  I  P  F  V  T  *  F  L  L  Y  I  D  R  Y  R  I  Y  R  A  I  T  *  K  Y  I  L  C  Y  S  P  S  Y  P  I  E  T  D  P  M  I  L  N  R  S  Y  L  G  S  Q  I  P  S  C  L  *  R  A  D  L  I  V  L  V  S  I  I  D  F  F  </second_frame>
            <third_frame>   R  K  D  R  L  D  N  E  L  L  V  L  S  H  L  *  R  L  I  N  N  S  K  C  F  S  C  V  F  L  I  N  Q  R  L  Y  R  D  V  G  G  S  L  W  E  V  R  S  P  F  Y  I  S  S  S  A  N  N  S  R  C  E  N  T  E  P  G  G  *  S  L  N  R  K  M  S  G  S  V  G  S  Q  M  N  W  L  I  R  K  R  P  *  D  L  S  R  V  W  Y  C  M  V  P  L  C  K  N  P  E  S  F  S  *  S  S  S  S  S  S  *  M  I  R  L  P  R  N  N  L  D  Q  *  G  N  P  N  S  L  G  V  S  I  Q  S  N  T  K  P  Q  G  R  H  I  L  G  A  Q  T  M  *  L  N  K  S  S  C  G  S  R  A  P  S  P  S  P  S  S  N  S  D  S  Y  F  S  *  R  N  L  *  S  R  I  D  Q  E  P  F  C  I  I  S  K  G  F  L  G  S  G  R  R  S  N  V  T  R  S  L  S  N  *  L  Q  S  F  S  V  R  E  D  P  T  R  A  P  S  T  S  N  R  P  *  T  R  S  E  S  F  S  T  N  P  *  E  V  I  P  F  F  S  S  G  T  D  K  D  Q  R  S  *  A  T  D  P  A  E  Q  L  K  R  *  R  S  I  V  N  L  F  M  L  V  P  S  S  K  Y  H  L  H  K  *  E  S  P  S  L  H  D  F  F  F  I  *  I  D  I  G  S  I  G  Q  L  L  R  S  T  F  C  A  T  A  L  P  I  R  *  K  R  I  P  *  S  *  T  D  L  T  W  D  H  K  S  Q  V  V  Y  E  E  R  I  *  L  Y  *  C  L  *  L  I  S  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0223O24.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="-" PGL_start="42456" PGL_stop="42265"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="42456" e_stop="42265"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="42456" e_stop="42265" e_length="192"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42456" stop="42265"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566453" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCTGGAATTGGAAGAAATTCGGCAGCGGATCGCGAAATCCTGGTGATCTTCTCTATCTAATGAATGGGGAGTCCTCTTTAAAATCGTCCGCCCGTAACCCAACAGATAAAGTACATTACATAGTCCAGGGATTGGCGACTTACCCATTCAGTGACTTTGGCACTGGACGTTCCCAAAATGGGGACTATCGG</gDNA_template>
            <first_frame> S  W  N  W  K  K  F  G  S  G  S  R  N  P  G  D  L  L  Y  L  M  N  G  E  S  S  L  K  S  S  A  R  N  P  T  D  K  V  H  Y  I  V  Q  G  L  A  T  Y  P  F  S  D  F  G  T  G  R  S  Q  N  G  D  Y  R </first_frame>
            <second_frame>  P  G  I  G  R  N  S  A  A  D  R  E  I  L  V  I  F  S  I  *  *  M  G  S  P  L  *  N  R  P  P  V  T  Q  Q  I  K  Y  I  T  *  S  R  D  W  R  L  T  H  S  V  T  L  A  L  D  V  P  K  M  G  T  I   </second_frame>
            <third_frame>   L  E  L  E  E  I  R  Q  R  I  A  K  S  W  *  S  S  L  S  N  E  W  G  V  L  F  K  I  V  R  P  *  P  N  R  *  S  T  L  H  S  P  G  I  G  D  L  P  I  Q  *  L  W  H  W  T  F  P  K  W  G  L  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42456" stop="42265"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SWNWKKFGSGSRNPGDLLYLMNGESSLKSSARNPTDKVHYIVQGLATYPFSDFGTGRSQNGDYR</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="25" PGL_strand="+" PGL_start="45888" PGL_stop="46031"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="45888" e_stop="46031"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.972"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.972">
            <gDNA_exon_boundary e_start="45888" e_stop="46031" e_length="144"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45888" stop="46031"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586406" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAATCTCTTGTTAATTATAATTATTTATCATGTTTGAATAATGTTATAATAACCATCTTTAGAAAGTTTGCTACAGAAATATTCTTCGAATAAGTATGCCCAAACTATGTCATCCTAAGGTTTAAACCGGTAGGCAGAGAAGG</gDNA_template>
            <first_frame> K  I  S  C  *  L  *  L  F  I  M  F  E  *  C  Y  N  N  H  L  *  K  V  C  Y  R  N  I  L  R  I  S  M  P  K  L  C  H  P  K  V  *  T  G  R  Q  R  R </first_frame>
            <second_frame>  K  S  L  V  N  Y  N  Y  L  S  C  L  N  N  V  I  I  T  I  F  R  K  F  A  T  E  I  F  F  E  *  V  C  P  N  Y  V  I  L  R  F  K  P  V  G  R  E   </second_frame>
            <third_frame>   N  L  L  L  I  I  I  I  Y  H  V  *  I  M  L  *  *  P  S  L  E  S  L  L  Q  K  Y  S  S  N  K  Y  A  Q  T  M  S  S  *  G  L  N  R  *  A  E  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0223O24.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="26" PGL_strand="+" PGL_start="48456" PGL_stop="49203"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="48456" e_stop="49203"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.901"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.901">
            <gDNA_exon_boundary e_start="48456" e_stop="49203" e_length="748"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48456" stop="49203"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589636" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="26" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGTATTATGTAAAAAATCATAAAATAAAAAGACCTTACATACCAAAAAGAAAAATATCCCAATGTACTTGTTATAATTGTGGAAAGATAGGACACATAGCTAAAGATTGTAAATTACCCAAAAATCCAAAAAGAAAACAAATAGCAGAATTAATTATAGACAATGAAAAATATATGCAAATAGAGTACATAGATTATGAATTAAGTGAAAATGATAGTATATATGAAGTATCAGACATAGAAACTGAGAATGAAGAAGAAAATATTAACATAGATAACAACGAAAAAGATGAAGAATTATAATGTCTGAAAATGAAATAAAAATAATATCTAAGGAAGAATATCAAGATGAGGAATCATCATAACAGAAAATTATATTTGATAATACGATATTTGAACAAATAAAAGGAAAAGAATTAGATTTAAGTGTTGAAAAAGTACTAGAAATACCTATTTTAAGAAATTGGTTTAAAAGACAAAAAGAAGAATACTATATAGTTAGTCAAAAAGAACATATCATAGATTGTAAATACACAAGAGGAAAAGCATTTATACCTATAATAAATAAAAGAATGATAAACAAAGAAATACAAGATATAAAAGCTAAAACACCAATAAAATATGTACATTTAGGAGGAACAGAAATATTAATAAAAGCCTGCTTTAGAGAAGGAATAGATACACCTATAGAAATATATTTAGCAGATGATAGAATTGTACACCCTATAGAAAAAAGCATAATTAGTGC</gDNA_template>
            <first_frame> R  Y  Y  V  K  N  H  K  I  K  R  P  Y  I  P  K  R  K  I  S  Q  C  T  C  Y  N  C  G  K  I  G  H  I  A  K  D  C  K  L  P  K  N  P  K  R  K  Q  I  A  E  L  I  I  D  N  E  K  Y  M  Q  I  E  Y  I  D  Y  E  L  S  E  N  D  S  I  Y  E  V  S  D  I  E  T  E  N  E  E  E  N  I  N  I  D  N  N  E  K  D  E  E  L  *  C  L  K  M  K  *  K  *  Y  L  R  K  N  I  K  M  R  N  H  H  N  R  K  L  Y  L  I  I  R  Y  L  N  K  *  K  E  K  N  *  I  *  V  L  K  K  Y  *  K  Y  L  F  *  E  I  G  L  K  D  K  K  K  N  T  I  *  L  V  K  K  N  I  S  *  I  V  N  T  Q  E  E  K  H  L  Y  L  *  *  I  K  E  *  *  T  K  K  Y  K  I  *  K  L  K  H  Q  *  N  M  Y  I  *  E  E  Q  K  Y  *  *  K  P  A  L  E  K  E  *  I  H  L  *  K  Y  I  *  Q  M  I  E  L  Y  T  L  *  K  K  A  *  L  V  </first_frame>
            <second_frame>  G  I  M  *  K  I  I  K  *  K  D  L  T  Y  Q  K  E  K  Y  P  N  V  L  V  I  I  V  E  R  *  D  T  *  L  K  I  V  N  Y  P  K  I  Q  K  E  N  K  *  Q  N  *  L  *  T  M  K  N  I  C  K  *  S  T  *  I  M  N  *  V  K  M  I  V  Y  M  K  Y  Q  T  *  K  L  R  M  K  K  K  I  L  T  *  I  T  T  K  K  M  K  N  Y  N  V  *  K  *  N  K  N  N  I  *  G  R  I  S  R  *  G  I  I  I  T  E  N  Y  I  *  *  Y  D  I  *  T  N  K  R  K  R  I  R  F  K  C  *  K  S  T  R  N  T  Y  F  K  K  L  V  *  K  T  K  R  R  I  L  Y  S  *  S  K  R  T  Y  H  R  L  *  I  H  K  R  K  S  I  Y  T  Y  N  K  *  K  N  D  K  Q  R  N  T  R  Y  K  S  *  N  T  N  K  I  C  T  F  R  R  N  R  N  I  N  K  S  L  L  *  R  R  N  R  Y  T  Y  R  N  I  F  S  R  *  *  N  C  T  P  Y  R  K  K  H  N  *  C </second_frame>
            <third_frame>   V  L  C  K  K  S  *  N  K  K  T  L  H  T  K  K  K  N  I  P  M  Y  L  L  *  L  W  K  D  R  T  H  S  *  R  L  *  I  T  Q  K  S  K  K  K  T  N  S  R  I  N  Y  R  Q  *  K  I  Y  A  N  R  V  H  R  L  *  I  K  *  K  *  *  Y  I  *  S  I  R  H  R  N  *  E  *  R  R  K  Y  *  H  R  *  Q  R  K  R  *  R  I  I  M  S  E  N  E  I  K  I  I  S  K  E  E  Y  Q  D  E  E  S  S  *  Q  K  I  I  F  D  N  T  I  F  E  Q  I  K  G  K  E  L  D  L  S  V  E  K  V  L  E  I  P  I  L  R  N  W  F  K  R  Q  K  E  E  Y  Y  I  V  S  Q  K  E  H  I  I  D  C  K  Y  T  R  G  K  A  F  I  P  I  I  N  K  R  M  I  N  K  E  I  Q  D  I  K  A  K  T  P  I  K  Y  V  H  L  G  G  T  E  I  L  I  K  A  C  F  R  E  G  I  D  T  P  I  E  I  Y  L  A  D  D  R  I  V  H  P  I  E  K  S  I  I  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="+"/>
                <serials PGL_serial="26" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48821" stop="49201"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>381</number_coding_nucleotides>
                  <number_encoded_amino_acids>127</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QKIIFDNTIFEQIKGKELDLSVEKVLEIPILRNWFKRQKEEYYIVSQKEHIIDCKYTRGKAFIPIINKRMINKEIQDIKAKTPIKYVHLGGTEILIKACFREGIDTPIEIYLADDRIVHPIEKSIIS</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="+"/>
                <serials PGL_serial="26" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48456" stop="48758"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>300</number_coding_nucleotides>
                  <number_encoded_amino_acids>100</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RYYVKNHKIKRPYIPKRKISQCTCYNCGKIGHIAKDCKLPKNPKRKQIAELIIDNEKYMQIEYIDYELSENDSIYEVSDIETENEEENINIDNNEKDEEL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="27" PGL_strand="+" PGL_start="52028" PGL_stop="52818"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52028" e_stop="52818"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="52028" e_stop="52818" e_length="791"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52028" stop="52818"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570769" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCTACGTCGTTCGGCGGACGGTAAAAAGCCAGAACTAGAAGGAGACGTTGGGAAACATTATAAAACCCATGACAATGTTTGTTTAAATGCAGCTACAGCAAGCACATCTACAACAAAAGGAGCCAGTGGAATAAGATATACAAATTTAAATATGAACAAAATCTTCGATAAACCATTTATTCCAAAGAACCAAAAAGACTCATTATTTATACCACCACAAATACATACTTACTCAGAAAGTTTAAACCACGATAAAAAAGCCTACAACCACATAACCCGCTCATATATTGAAAACCTTTATAAAATACAAAATTATTTAAACTCAACACCTAGATCTCCAACTACCAAAGACCCTAATACTGATTTTATAACCCAAAAGCTACAAGGATATAATAAGTTAATAGCACAACCAGGCACCAATGCAAATCTAGTAAAAACATGTTATAGTTATGGATTACTTAATACAGTTTATACCCAAACAGGAGATGAAATATCTACCATACCAGAGCTATACAAAGCCTTTATGAACTATAAAAGAATTACTAAAGGAACATTGTTTTATATAAAGTTTTATTCAGCACCAGCAGAGATATTATTTGATGAGATAAAACCAATTATACAAGTTATAAAAATTGGTTTGACCAGAGATATGATAATTCCAGAAGATATCAGAATACAACAAGAAATACAAAAGATTGAGATACCAGAATTCTACGCCAACAAAAGAGTTATAGGAATAGCAACTATCCTAAATGAACTAACTAACAATTATTTAAACGGAAATTCAGTAT</gDNA_template>
            <first_frame> A  T  S  F  G  G  R  *  K  A  R  T  R  R  R  R  W  E  T  L  *  N  P  *  Q  C  L  F  K  C  S  Y  S  K  H  I  Y  N  K  R  S  Q  W  N  K  I  Y  K  F  K  Y  E  Q  N  L  R  *  T  I  Y  S  K  E  P  K  R  L  I  I  Y  T  T  T  N  T  Y  L  L  R  K  F  K  P  R  *  K  S  L  Q  P  H  N  P  L  I  Y  *  K  P  L  *  N  T  K  L  F  K  L  N  T  *  I  S  N  Y  Q  R  P  *  Y  *  F  Y  N  P  K  A  T  R  I  *  *  V  N  S  T  T  R  H  Q  C  K  S  S  K  N  M  L  *  L  W  I  T  *  Y  S  L  Y  P  N  R  R  *  N  I  Y  H  T  R  A  I  Q  S  L  Y  E  L  *  K  N  Y  *  R  N  I  V  L  Y  K  V  L  F  S  T  S  R  D  I  I  *  *  D  K  T  N  Y  T  S  Y  K  N  W  F  D  Q  R  Y  D  N  S  R  R  Y  Q  N  T  T  R  N  T  K  D  *  D  T  R  I  L  R  Q  Q  K  S  Y  R  N  S  N  Y  P  K  *  T  N  *  Q  L  F  K  R  K  F  S   </first_frame>
            <second_frame>  L  R  R  S  A  D  G  K  K  P  E  L  E  G  D  V  G  K  H  Y  K  T  H  D  N  V  C  L  N  A  A  T  A  S  T  S  T  T  K  G  A  S  G  I  R  Y  T  N  L  N  M  N  K  I  F  D  K  P  F  I  P  K  N  Q  K  D  S  L  F  I  P  P  Q  I  H  T  Y  S  E  S  L  N  H  D  K  K  A  Y  N  H  I  T  R  S  Y  I  E  N  L  Y  K  I  Q  N  Y  L  N  S  T  P  R  S  P  T  T  K  D  P  N  T  D  F  I  T  Q  K  L  Q  G  Y  N  K  L  I  A  Q  P  G  T  N  A  N  L  V  K  T  C  Y  S  Y  G  L  L  N  T  V  Y  T  Q  T  G  D  E  I  S  T  I  P  E  L  Y  K  A  F  M  N  Y  K  R  I  T  K  G  T  L  F  Y  I  K  F  Y  S  A  P  A  E  I  L  F  D  E  I  K  P  I  I  Q  V  I  K  I  G  L  T  R  D  M  I  I  P  E  D  I  R  I  Q  Q  E  I  Q  K  I  E  I  P  E  F  Y  A  N  K  R  V  I  G  I  A  T  I  L  N  E  L  T  N  N  Y  L  N  G  N  S  V  </second_frame>
            <third_frame>   Y  V  V  R  R  T  V  K  S  Q  N  *  K  E  T  L  G  N  I  I  K  P  M  T  M  F  V  *  M  Q  L  Q  Q  A  H  L  Q  Q  K  E  P  V  E  *  D  I  Q  I  *  I  *  T  K  S  S  I  N  H  L  F  Q  R  T  K  K  T  H  Y  L  Y  H  H  K  Y  I  L  T  Q  K  V  *  T  T  I  K  K  P  T  T  T  *  P  A  H  I  L  K  T  F  I  K  Y  K  I  I  *  T  Q  H  L  D  L  Q  L  P  K  T  L  I  L  I  L  *  P  K  S  Y  K  D  I  I  S  *  *  H  N  Q  A  P  M  Q  I  *  *  K  H  V  I  V  M  D  Y  L  I  Q  F  I  P  K  Q  E  M  K  Y  L  P  Y  Q  S  Y  T  K  P  L  *  T  I  K  E  L  L  K  E  H  C  F  I  *  S  F  I  Q  H  Q  Q  R  Y  Y  L  M  R  *  N  Q  L  Y  K  L  *  K  L  V  *  P  E  I  *  *  F  Q  K  I  S  E  Y  N  K  K  Y  K  R  L  R  Y  Q  N  S  T  P  T  K  E  L  *  E  *  Q  L  S  *  M  N  *  L  T  I  I  *  T  E  I  Q  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="+"/>
                <serials PGL_serial="27" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52029" stop="52817"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>789</number_coding_nucleotides>
                  <number_encoded_amino_acids>263</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRRSADGKKPELEGDVGKHYKTHDNVCLNAATASTSTTKGASGIRYTNLNMNKIFDKPFIPKNQKDSLFIPPQIHTYSESLNHDKKAYNHITRSYIENLYKIQNYLNSTPRSPTTKDPNTDFITQKLQGYNKLIAQPGTNANLVKTCYSYGLLNTVYTQTGDEISTIPELYKAFMNYKRITKGTLFYIKFYSAPAEILFDEIKPIIQVIKIGLTRDMIIPEDIRIQQEIQKIEIPEFYANKRVIGIATILNELTNNYLNGNSV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="28" PGL_strand="+" PGL_start="54491" PGL_stop="54743"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54491" e_stop="54743"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.964"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.964">
            <gDNA_exon_boundary e_start="54491" e_stop="54743" e_length="253"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54491" stop="54743"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572618" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="28" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCTATAGTGGAGATAGTCACACGTAATGACACATCACGGCCATATTATTAAAATCTTGTTGTAAGAATGGGTTTCGTTCTAGTGCTCGAAAATAATATTCCAAAGCTTTCGTATGTTCTCCATTACTTGTGTGGATAAGCCCTATATTATAGAGTATATAACTTCGATCATAGGGATCAATTTCTAGTCGCATAGCTTCATAATAATTCTGCAAAGCTTCCGCATAATTTCCTTCGGATTGAGCCGACATCC</gDNA_template>
            <first_frame> F  Y  S  G  D  S  H  T  *  *  H  I  T  A  I  L  L  K  S  C  C  K  N  G  F  R  S  S  A  R  K  *  Y  S  K  A  F  V  C  S  P  L  L  V  W  I  S  P  I  L  *  S  I  *  L  R  S  *  G  S  I  S  S  R  I  A  S  *  *  F  C  K  A  S  A  *  F  P  S  D  *  A  D  I  </first_frame>
            <second_frame>  S  I  V  E  I  V  T  R  N  D  T  S  R  P  Y  Y  *  N  L  V  V  R  M  G  F  V  L  V  L  E  N  N  I  P  K  L  S  Y  V  L  H  Y  L  C  G  *  A  L  Y  Y  R  V  Y  N  F  D  H  R  D  Q  F  L  V  A  *  L  H  N  N  S  A  K  L  P  H  N  F  L  R  I  E  P  T  S </second_frame>
            <third_frame>   L  *  W  R  *  S  H  V  M  T  H  H  G  H  I  I  K  I  L  L  *  E  W  V  S  F  *  C  S  K  I  I  F  Q  S  F  R  M  F  S  I  T  C  V  D  K  P  Y  I  I  E  Y  I  T  S  I  I  G  I  N  F  *  S  H  S  F  I  I  I  L  Q  S  F  R  I  I  S  F  G  L  S  R  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0223O24.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="29" PGL_strand="-" PGL_start="58494" PGL_stop="55100"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="58494" e_stop="55100"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="58494" e_stop="55100" e_length="3395"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58494" stop="55100"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563384" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="29" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCCTCTTTGATTTTATTAACTATCTTCTATAGGAGACCCTTTTTTTGTCCAGTCAAAAATGATTTTATCATTTCGGAATCTGCAATTCAATATAGATTGATATATACCCGATCTATATGTCTTGCTTCCTGTCATTTTGCCATTCAATTTTGAATACTTGAACGATCGATTCTTGTTTTTTATCTTCACTTTCCCCTGAAAGCCGAGGAATGTCTCATTAGTTATAACTAACCATTGCATTAAACAATTAGAATTTGAAATAAATATAGAATGAGATATATATATAATATAGAATATAATATAGAACTGTAATAAAAAGTATTTCAAATGCCAAAAAAAGAAATGAAAAAAAAAAGAATATTTACCATTCAATTCAAATTGAAAATCAAAGAATATTAACAATATTTACAATCACTATTTAATAATATTAGTATTAGAATTGTGATAAATCGAAATTCTAGATCGCTATATTAATCCTTATGCTCTAGAATATTCAATAGAATATTGACTAGTTAATAACTAAGATTCCAATTCCAGTAGTTTAGTCAATTACTATGCATATAAGATTTCTGTGATGTGGGCCCGCTTAGCTCAGAGGTTAGAGCATCGCATTTGTAATGCGATGGTCATCGGTTCGATTCCGATAGCCGGCTTTTCCCCTTTTTTTTTCATTTTTTAGATGATTGATAATGTTCCTTTGAAATCAAAGAATATTGAAATTGCGCCTTCCTCCTTTTCCAAAAGCTATCAATTTATTATAGGAACTTCCAATTATGTCAGCAAAGAATTATATATATATAATAGAAGGGGTTCTGTATATTTATCTAATTCATCCCATTCTTCTTTTCTTTATAGTATTTATAGTACAAGTACACTATTTCAGTAAACTTCGCTTCATTTAGTTCAGTTTAGTTTTAGTTTAGGTTTATTCTGTAAAATAAAATTCAATAAAAAAATAGAAATAAGAATTCATTCAAAATACTAAATAAGAATAAGGAGTCTTTATGTCGCGTTACCGAGGACCTCGTTTCAAAAAAATACGACGCCTGGGGGCTTTACCAGGACTAACTAATAAAAAGCCTAGGACCGGAAGTGATCTTAGAAACCAATCGCGTTCCAGTAAAAAATCTCAATATCGTATTCGTCTAGAAGAAAAACAAAAATTGTGTTTTCATTATGGTCTTACAGAACGACAATTACTTAAATACGTTCGTATCGCCAGAAAAGCCAAGGGGTCAACAGGTCAAGTTTTACTACAATTACTTGAAATGCGTTTGGATAACATCCTTTTTCGATTCGGTATGGCTTCCACTATTCCCGCAGCCCGTCAATTAGTTAACCATCGACATATTTTAGTTAATGGTCATATAGTAGATATACCGAGTTATCGCTGCAAACCCCGAGATATTATTACGGCTAAGGATGAACAAAAATCCAGAGTTCTGATTCAAATTTCTCTCGATTCATCCCCTCATGAGAAGTTACCAAATCATTTGACCCTTCAGCCATTCCAATATAAAGGATTAGTCAATCAAATAATAGATAGCAAATGGGTTGGTTTGAAAATAAATAAATTGCTAGTCGTAGAATATTATTCTCGTCAGACTTAAACCTCAGACTTAAACCAAGGGTTCGCAAAAATTTCTTCCCTTTAGGCGAAGTAAATTAACCCAAGGTTAAGTAAGTTAAGTAAGATCAATCCGAGTTTGATCTAGATTTCCCCCATTTTTGTATCATAGACCAAGGATCTATTTTCATTCCTTGTCTATTCTTTTCTTTCCAGTATTTTGATTATGATTATTTTTGAGTATTCTATTTTACGCGTCACAGCAATTAGGAATTGAGAATCTATATCTTTAGATCAAAGAAGGGTCTAGCTGTTTGAATAATGGTATACAATGCTATTTGAGTCCTTGTTGTTAGTAAAATTGGTGAATTAAGCGAAGGTACGGAAAGAGAGGGATTCGAACCCTCGGTAAACAAAAGCCTACATAGCAGTTCCAATGCTACGCCTTGAACCACTCGGCCATCTCTCCTACATAATGATTATGACCCCAAAACCGAGTGAATAGCGAGTCAGTCATAATCCATATTCCATTATTTGATAGGTACGACCAATCCATTTTAACTGAAAATTTGTCATCAAAGTCAAAGCAAAGAACGGTTTTTCTTTCCTTCGAGGCTCCGGGATAAAGATACAATTTTTACGAAAAATTGTTCAAAAAAATTCAATTCATGTTTGCAAAAACAACGTTCCCTTCTTTTTCTGATATTTTTCTATTTTTATAACGGATTAATTCAATGAATTAGAACGAATCAACTAATTGATGGTCTATATCTTTTAGACTATAGTTAATGGATACTCTTAAATGATAACTGTAATTATAATTATATAGACTATGATTCCATACCAGAAAATTTTTTTAATTCCTTTTTGGTTTTGGAGTTCTCAACAACAAATACCTACCCCTCTATTAGAATAGAAATTCATCAAAAATTTAGATTCGATTGTATAGTGTATACCCGTTATGTACACAAAATTGGCAGTTATTCTATTTTCATCATAGAATGATTAGTCGATCTTTTTTCTTCTTTGTAATTTGTATCATGATTCAATCAAAATTTCTCGAGTTCTTCTAATTTGTAACTTCACCAAAATCAGAATAGTTCCTATACTACTACATTAGTATGAAATCGAATCGCGTTGAAATATTTCTTATTTCTTATTTCTTCTCGATTCCTGTCAAAAAGGAACAATTGGAATAGAGGATTCATATCTTTTGTTTTTTTGTTAAAAAAAAGAAGTTTTTATGTTATTCCGTATTATACAATTCTTTTCTTTGTGGGATCTTTTTCCCACGAGAGGTAATGAAAAGAATTCTAGAATGGATTGCTACCTATGCCTAGATCACGGATAAATGGAAATTTTATTGATAAGACCTTTTCAATTGTAGCCGATATCTTATTACGAGTAATTCCGACAACTTCCGGAGAAAAAGAGGCATTTACCTATTACAGAGATGGTGCGATTTGATTCTTTTTTTTTGATTTTATATTTATTCATTTCTCTCAGTCTTACGAGGAGAAAAATACATGATTCGAGAAAAGAAATCTACGCTTTTTGAAGGTGAAGTTTGGAAATAGAACAATTCCTTCTGTCGTGTATCCTCGATTAATGCAACCTCAGATGCTATGTTTCAATTATAGATTCTAGTATTAAGCGAAAGGTTACGCCTAGAGGTTCTGTATTACGGGTCAATCCTACTCTACTAGCGCTAATAGGCAGCATAGGGGAAGAAGCGCTACACCTAGGAATCAACAACACGAAAACTTTGTTCTAAGTCAGCCCTTTTCTTAGCGGGCTTGGGACTAAAAGAATGGTTGGGACAACAAA</gDNA_template>
            <first_frame> L  L  F  D  F  I  N  Y  L  L  *  E  T  L  F  L  S  S  Q  K  *  F  Y  H  F  G  I  C  N  S  I  *  I  D  I  Y  P  I  Y  M  S  C  F  L  S  F  C  H  S  I  L  N  T  *  T  I  D  S  C  F  L  S  S  L  S  P  E  S  R  G  M  S  H  *  L  *  L  T  I  A  L  N  N  *  N  L  K  *  I  *  N  E  I  Y  I  *  Y  R  I  *  Y  R  T  V  I  K  S  I  S  N  A  K  K  R  N  E  K  K  K  N  I  Y  H  S  I  Q  I  E  N  Q  R  I  L  T  I  F  T  I  T  I  *  *  Y  *  Y  *  N  C  D  K  S  K  F  *  I  A  I  L  I  L  M  L  *  N  I  Q  *  N  I  D  *  L  I  T  K  I  P  I  P  V  V  *  S  I  T  M  H  I  R  F  L  *  C  G  P  A  *  L  R  G  *  S  I  A  F  V  M  R  W  S  S  V  R  F  R  *  P  A  F  P  L  F  F  S  F  F  R  *  L  I  M  F  L  *  N  Q  R  I  L  K  L  R  L  P  P  F  P  K  A  I  N  L  L  *  E  L  P  I  M  S  A  K  N  Y  I  Y  I  I  E  G  V  L  Y  I  Y  L  I  H  P  I  L  L  F  F  I  V  F  I  V  Q  V  H  Y  F  S  K  L  R  F  I  *  F  S  L  V  L  V  *  V  Y  S  V  K  *  N  S  I  K  K  *  K  *  E  F  I  Q  N  T  K  *  E  *  G  V  F  M  S  R  Y  R  G  P  R  F  K  K  I  R  R  L  G  A  L  P  G  L  T  N  K  K  P  R  T  G  S  D  L  R  N  Q  S  R  S  S  K  K  S  Q  Y  R  I  R  L  E  E  K  Q  K  L  C  F  H  Y  G  L  T  E  R  Q  L  L  K  Y  V  R  I  A  R  K  A  K  G  S  T  G  Q  V  L  L  Q  L  L  E  M  R  L  D  N  I  L  F  R  F  G  M  A  S  T  I  P  A  A  R  Q  L  V  N  H  R  H  I  L  V  N  G  H  I  V  D  I  P  S  Y  R  C  K  P  R  D  I  I  T  A  K  D  E  Q  K  S  R  V  L  I  Q  I  S  L  D  S  S  P  H  E  K  L  P  N  H  L  T  L  Q  P  F  Q  Y  K  G  L  V  N  Q  I  I  D  S  K  W  V  G  L  K  I  N  K  L  L  V  V  E  Y  Y  S  R  Q  T  *  T  S  D  L  N  Q  G  F  A  K  I  S  S  L  *  A  K  *  I  N  P  R  L  S  K  L  S  K  I  N  P  S  L  I  *  I  S  P  I  F  V  S  *  T  K  D  L  F  S  F  L  V  Y  S  F  L  S  S  I  L  I  M  I  I  F  E  Y  S  I  L  R  V  T  A  I  R  N  *  E  S  I  S  L  D  Q  R  R  V  *  L  F  E  *  W  Y  T  M  L  F  E  S  L  L  L  V  K  L  V  N  *  A  K  V  R  K  E  R  D  S  N  P  R  *  T  K  A  Y  I  A  V  P  M  L  R  L  E  P  L  G  H  L  S  Y  I  M  I  M  T  P  K  P  S  E  *  R  V  S  H  N  P  Y  S  I  I  *  *  V  R  P  I  H  F  N  *  K  F  V  I  K  V  K  A  K  N  G  F  S  F  L  R  G  S  G  I  K  I  Q  F  L  R  K  I  V  Q  K  N  S  I  H  V  C  K  N  N  V  P  F  F  F  *  Y  F  S  I  F  I  T  D  *  F  N  E  L  E  R  I  N  *  L  M  V  Y  I  F  *  T  I  V  N  G  Y  S  *  M  I  T  V  I  I  I  I  *  T  M  I  P  Y  Q  K  I  F  L  I  P  F  W  F  W  S  S  Q  Q  Q  I  P  T  P  L  L  E  *  K  F  I  K  N  L  D  S  I  V  *  C  I  P  V  M  Y  T  K  L  A  V  I  L  F  S  S  *  N  D  *  S  I  F  F  L  L  C  N  L  Y  H  D  S  I  K  I  S  R  V  L  L  I  C  N  F  T  K  I  R  I  V  P  I  L  L  H  *  Y  E  I  E  S  R  *  N  I  S  Y  F  L  F  L  L  D  S  C  Q  K  G  T  I  G  I  E  D  S  Y  L  L  F  F  C  *  K  K  E  V  F  M  L  F  R  I  I  Q  F  F  S  L  W  D  L  F  P  T  R  G  N  E  K  N  S  R  M  D  C  Y  L  C  L  D  H  G  *  M  E  I  L  L  I  R  P  F  Q  L  *  P  I  S  Y  Y  E  *  F  R  Q  L  P  E  K  K  R  H  L  P  I  T  E  M  V  R  F  D  S  F  F  L  I  L  Y  L  F  I  S  L  S  L  T  R  R  K  I  H  D  S  R  K  E  I  Y  A  F  *  R  *  S  L  E  I  E  Q  F  L  L  S  C  I  L  D  *  C  N  L  R  C  Y  V  S  I  I  D  S  S  I  K  R  K  V  T  P  R  G  S  V  L  R  V  N  P  T  L  L  A  L  I  G  S  I  G  E  E  A  L  H  L  G  I  N  N  T  K  T  L  F  *  V  S  P  F  L  S  G  L  G  T  K  R  M  V  G  T  T   </first_frame>
            <second_frame>  S  S  L  I  L  L  T  I  F  Y  R  R  P  F  F  C  P  V  K  N  D  F  I  I  S  E  S  A  I  Q  Y  R  L  I  Y  T  R  S  I  C  L  A  S  C  H  F  A  I  Q  F  *  I  L  E  R  S  I  L  V  F  Y  L  H  F  P  L  K  A  E  E  C  L  I  S  Y  N  *  P  L  H  *  T  I  R  I  *  N  K  Y  R  M  R  Y  I  Y  N  I  E  Y  N  I  E  L  *  *  K  V  F  Q  M  P  K  K  E  M  K  K  K  R  I  F  T  I  Q  F  K  L  K  I  K  E  Y  *  Q  Y  L  Q  S  L  F  N  N  I  S  I  R  I  V  I  N  R  N  S  R  S  L  Y  *  S  L  C  S  R  I  F  N  R  I  L  T  S  *  *  L  R  F  Q  F  Q  *  F  S  Q  L  L  C  I  *  D  F  C  D  V  G  P  L  S  S  E  V  R  A  S  H  L  *  C  D  G  H  R  F  D  S  D  S  R  L  F  P  F  F  F  H  F  L  D  D  *  *  C  S  F  E  I  K  E  Y  *  N  C  A  F  L  L  F  Q  K  L  S  I  Y  Y  R  N  F  Q  L  C  Q  Q  R  I  I  Y  I  *  *  K  G  F  C  I  F  I  *  F  I  P  F  F  F  S  L  *  Y  L  *  Y  K  Y  T  I  S  V  N  F  A  S  F  S  S  V  *  F  *  F  R  F  I  L  *  N  K  I  Q  *  K  N  R  N  K  N  S  F  K  I  L  N  K  N  K  E  S  L  C  R  V  T  E  D  L  V  S  K  K  Y  D  A  W  G  L  Y  Q  D  *  L  I  K  S  L  G  P  E  V  I  L  E  T  N  R  V  P  V  K  N  L  N  I  V  F  V  *  K  K  N  K  N  C  V  F  I  M  V  L  Q  N  D  N  Y  L  N  T  F  V  S  P  E  K  P  R  G  Q  Q  V  K  F  Y  Y  N  Y  L  K  C  V  W  I  T  S  F  F  D  S  V  W  L  P  L  F  P  Q  P  V  N  *  L  T  I  D  I  F  *  L  M  V  I  *  *  I  Y  R  V  I  A  A  N  P  E  I  L  L  R  L  R  M  N  K  N  P  E  F  *  F  K  F  L  S  I  H  P  L  M  R  S  Y  Q  I  I  *  P  F  S  H  S  N  I  K  D  *  S  I  K  *  *  I  A  N  G  L  V  *  K  *  I  N  C  *  S  *  N  I  I  L  V  R  L  K  P  Q  T  *  T  K  G  S  Q  K  F  L  P  F  R  R  S  K  L  T  Q  G  *  V  S  *  V  R  S  I  R  V  *  S  R  F  P  P  F  L  Y  H  R  P  R  I  Y  F  H  S  L  S  I  L  F  F  P  V  F  *  L  *  L  F  L  S  I  L  F  Y  A  S  Q  Q  L  G  I  E  N  L  Y  L  *  I  K  E  G  S  S  C  L  N  N  G  I  Q  C  Y  L  S  P  C  C  *  *  N  W  *  I  K  R  R  Y  G  K  R  G  I  R  T  L  G  K  Q  K  P  T  *  Q  F  Q  C  Y  A  L  N  H  S  A  I  S  P  T  *  *  L  *  P  Q  N  R  V  N  S  E  S  V  I  I  H  I  P  L  F  D  R  Y  D  Q  S  I  L  T  E  N  L  S  S  K  S  K  Q  R  T  V  F  L  S  F  E  A  P  G  *  R  Y  N  F  Y  E  K  L  F  K  K  I  Q  F  M  F  A  K  T  T  F  P  S  F  S  D  I  F  L  F  L  *  R  I  N  S  M  N  *  N  E  S  T  N  *  W  S  I  S  F  R  L  *  L  M  D  T  L  K  *  *  L  *  L  *  L  Y  R  L  *  F  H  T  R  K  F  F  *  F  L  F  G  F  G  V  L  N  N  K  Y  L  P  L  Y  *  N  R  N  S  S  K  I  *  I  R  L  Y  S  V  Y  P  L  C  T  Q  N  W  Q  L  F  Y  F  H  H  R  M  I  S  R  S  F  F  F  F  V  I  C  I  M  I  Q  S  K  F  L  E  F  F  *  F  V  T  S  P  K  S  E  *  F  L  Y  Y  Y  I  S  M  K  S  N  R  V  E  I  F  L  I  S  Y  F  F  S  I  P  V  K  K  E  Q  L  E  *  R  I  H  I  F  C  F  F  V  K  K  K  K  F  L  C  Y  S  V  L  Y  N  S  F  L  C  G  I  F  F  P  R  E  V  M  K  R  I  L  E  W  I  A  T  Y  A  *  I  T  D  K  W  K  F  Y  *  *  D  L  F  N  C  S  R  Y  L  I  T  S  N  S  D  N  F  R  R  K  R  G  I  Y  L  L  Q  R  W  C  D  L  I  L  F  F  *  F  Y  I  Y  S  F  L  S  V  L  R  G  E  K  Y  M  I  R  E  K  K  S  T  L  F  E  G  E  V  W  K  *  N  N  S  F  C  R  V  S  S  I  N  A  T  S  D  A  M  F  Q  L  *  I  L  V  L  S  E  R  L  R  L  E  V  L  Y  Y  G  S  I  L  L  Y  *  R  *  *  A  A  *  G  K  K  R  Y  T  *  E  S  T  T  R  K  L  C  S  K  S  A  L  F  L  A  G  L  G  L  K  E  W  L  G  Q  Q  </second_frame>
            <third_frame>   P  L  *  F  Y  *  L  S  S  I  G  D  P  F  F  V  Q  S  K  M  I  L  S  F  R  N  L  Q  F  N  I  D  *  Y  I  P  D  L  Y  V  L  L  P  V  I  L  P  F  N  F  E  Y  L  N  D  R  F  L  F  F  I  F  T  F  P  *  K  P  R  N  V  S  L  V  I  T  N  H  C  I  K  Q  L  E  F  E  I  N  I  E  *  D  I  Y  I  I  *  N  I  I  *  N  C  N  K  K  Y  F  K  C  Q  K  K  K  *  K  K  K  E  Y  L  P  F  N  S  N  *  K  S  K  N  I  N  N  I  Y  N  H  Y  L  I  I  L  V  L  E  L  *  *  I  E  I  L  D  R  Y  I  N  P  Y  A  L  E  Y  S  I  E  Y  *  L  V  N  N  *  D  S  N  S  S  S  L  V  N  Y  Y  A  Y  K  I  S  V  M  W  A  R  L  A  Q  R  L  E  H  R  I  C  N  A  M  V  I  G  S  I  P  I  A  G  F  S  P  F  F  F  I  F  *  M  I  D  N  V  P  L  K  S  K  N  I  E  I  A  P  S  S  F  S  K  S  Y  Q  F  I  I  G  T  S  N  Y  V  S  K  E  L  Y  I  Y  N  R  R  G  S  V  Y  L  S  N  S  S  H  S  S  F  L  Y  S  I  Y  S  T  S  T  L  F  Q  *  T  S  L  H  L  V  Q  F  S  F  S  L  G  L  F  C  K  I  K  F  N  K  K  I  E  I  R  I  H  S  K  Y  *  I  R  I  R  S  L  Y  V  A  L  P  R  T  S  F  Q  K  N  T  T  P  G  G  F  T  R  T  N  *  *  K  A  *  D  R  K  *  S  *  K  P  I  A  F  Q  *  K  I  S  I  S  Y  S  S  R  R  K  T  K  I  V  F  S  L  W  S  Y  R  T  T  I  T  *  I  R  S  Y  R  Q  K  S  Q  G  V  N  R  S  S  F  T  T  I  T  *  N  A  F  G  *  H  P  F  S  I  R  Y  G  F  H  Y  S  R  S  P  S  I  S  *  P  S  T  Y  F  S  *  W  S  Y  S  R  Y  T  E  L  S  L  Q  T  P  R  Y  Y  Y  G  *  G  *  T  K  I  Q  S  S  D  S  N  F  S  R  F  I  P  S  *  E  V  T  K  S  F  D  P  S  A  I  P  I  *  R  I  S  Q  S  N  N  R  *  Q  M  G  W  F  E  N  K  *  I  A  S  R  R  I  L  F  S  S  D  L  N  L  R  L  K  P  R  V  R  K  N  F  F  P  L  G  E  V  N  *  P  K  V  K  *  V  K  *  D  Q  S  E  F  D  L  D  F  P  H  F  C  I  I  D  Q  G  S  I  F  I  P  C  L  F  F  S  F  Q  Y  F  D  Y  D  Y  F  *  V  F  Y  F  T  R  H  S  N  *  E  L  R  I  Y  I  F  R  S  K  K  G  L  A  V  *  I  M  V  Y  N  A  I  *  V  L  V  V  S  K  I  G  E  L  S  E  G  T  E  R  E  G  F  E  P  S  V  N  K  S  L  H  S  S  S  N  A  T  P  *  T  T  R  P  S  L  L  H  N  D  Y  D  P  K  T  E  *  I  A  S  Q  S  *  S  I  F  H  Y  L  I  G  T  T  N  P  F  *  L  K  I  C  H  Q  S  Q  S  K  E  R  F  F  F  P  S  R  L  R  D  K  D  T  I  F  T  K  N  C  S  K  K  F  N  S  C  L  Q  K  Q  R  S  L  L  F  L  I  F  F  Y  F  Y  N  G  L  I  Q  *  I  R  T  N  Q  L  I  D  G  L  Y  L  L  D  Y  S  *  W  I  L  L  N  D  N  C  N  Y  N  Y  I  D  Y  D  S  I  P  E  N  F  F  N  S  F  L  V  L  E  F  S  T  T  N  T  Y  P  S  I  R  I  E  I  H  Q  K  F  R  F  D  C  I  V  Y  T  R  Y  V  H  K  I  G  S  Y  S  I  F  I  I  E  *  L  V  D  L  F  S  S  L  *  F  V  S  *  F  N  Q  N  F  S  S  S  S  N  L  *  L  H  Q  N  Q  N  S  S  Y  T  T  T  L  V  *  N  R  I  A  L  K  Y  F  L  F  L  I  S  S  R  F  L  S  K  R  N  N  W  N  R  G  F  I  S  F  V  F  L  L  K  K  R  S  F  Y  V  I  P  Y  Y  T  I  L  F  F  V  G  S  F  S  H  E  R  *  *  K  E  F  *  N  G  L  L  P  M  P  R  S  R  I  N  G  N  F  I  D  K  T  F  S  I  V  A  D  I  L  L  R  V  I  P  T  T  S  G  E  K  E  A  F  T  Y  Y  R  D  G  A  I  *  F  F  F  F  D  F  I  F  I  H  F  S  Q  S  Y  E  E  K  N  T  *  F  E  K  R  N  L  R  F  L  K  V  K  F  G  N  R  T  I  P  S  V  V  Y  P  R  L  M  Q  P  Q  M  L  C  F  N  Y  R  F  *  Y  *  A  K  G  Y  A  *  R  F  C  I  T  G  Q  S  Y  S  T  S  A  N  R  Q  H  R  G  R  S  A  T  P  R  N  Q  Q  H  E  N  F  V  L  S  Q  P  F  S  *  R  A  W  D  *  K  N  G  W  D  N  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="29" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57498" stop="56884"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>612</number_coding_nucleotides>
                  <number_encoded_amino_acids>204</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GVFMSRYRGPRFKKIRRLGALPGLTNKKPRTGSDLRNQSRSSKKSQYRIRLEEKQKLCFHYGLTERQLLKYVRIARKAKGSTGQVLLQLLEMRLDNILFRFGMASTIPAARQLVNHRHILVNGHIVDIPSYRCKPRDIITAKDEQKSRVLIQISLDSSPHEKLPNHLTLQPFQYKGLVNQIIDSKWVGLKINKLLVVEYYSRQT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="29" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="56137" stop="55922"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WILLNDNCNYNYIDYDSIPENFFNSFLVLEFSTTNTYPSIRIEIHQKFRFDCIVYTRYVHKIGSYSIFIIE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="29" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57814" stop="57608"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MIDNVPLKSKNIEIAPSSFSKSYQFIIGTSNYVSKELYIYNRRGSVYLSNSSHSSFLYSIYSTSTLFQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="30" PGL_strand="-" PGL_start="60301" PGL_stop="58564"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="60301" e_stop="58564"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="60301" e_stop="58564" e_length="1738"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60301" stop="58564"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575504" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="30" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTAGACAATTTCAGATATTCAAGGATTGCACGTTTTGTTATAGATTAAGCCTAACAACAAAAGACAATTAGGGATTCATTGGAATTCTCACATTTAGTTGGAAGATACTTCTTTCGGATGGGTCACACCAATAGGATGAACCAAATGAGTTCTGCATCATGAACTTTGTACTGCGCACGTTACTTAGACGGGTTCTAGAAAGGCATATAGGAAGGAATGGAGAAATCGAGAATAAAGAAATTTAATATGAAAGAAAAGCCAAAGAAATGAGATAATATCAGATTCTATTTCTTTGGATCTGAGCTGAATGTTGTCTATTTCAACCCCCCTAGATTCGGATTCTACTTTTGAGCCTTTCCACAATTAACTAATTTTACCTTTCTAATATGTATTACGTAATCAAATTCGTTTGAACAAGAGGAGAAAAAAAGAGGAGATAGAATCCAATTCTTTTAGATACTTTATCTAAGAAACTCTACCCATCTATGTTCTAGATGGGGTATATCTCGCTAAACTGGATAAAGCTATTATTCTAATCTAGACTATAAAAAAATATGTATGTGGATTCATATCAATTAATTAGAAATTCATTCTAGGGAAGAGAGACCCATACAAATTAATCATGTGCCAAGAACCAGATTTGAACTGGTGACACGAGGATTTTCAGTCCTCTGCTCTACCAACTGAGCTATCCCGGCTATTCCCAATCTCGATTGGGACCGCTAACATGAGGATTTAGAGTCCTTTCCATAATATCCTCATTTTATCATATAACTGGGGTCTATGTCAATTAAAAGGACAAAAGTCGATTAAAATTTTTTATCAAAGCCGGGGGATTTCTTCGATCTTCAAAAATATGACTTTGTAAGTTTTAGTATGAGTAATGATATTGTATTGATCGGGAATCATTCAACTAGGGATTTCTTGCTCAAATATGTTCATTTCTATGTGTATCATAGATATCAAATTGTGATAAGAGAAAGCCATTTACGCTTAGAAAAAAAATCCATTTCTAAAAGAATAGAGTGAATGAGAAAGATAAGGAATTTGGAACCGCTAAGGAAAGGGGGTCGGATAAATAGTTGGGGAGTTAAATAGTCTTTTTGGGGATAGAGGGACTTGAACCCTCACGATTTTTAAAGTCGACGGATTTTCCTTTTAATATAAATTTCATTGTTGCCGGTATTGACATGTAGAACGGGACTCTATCTTTATTCTCGTCCGATTAATCAGATCTTCAAAAGATCTATCAGACTTTGGAGTGAATGATTTGATCAATGAATATTCGATTCTTTCTTCAATATAGAATGGATTCACACCAATTCTTCGATTTTTTATAGAAAAACTACGAATTCGGGTCGTCATTAATCATTTGATATAGTATTCAATACGTATGTATATACGTTTATCCTTCACTTCATTCTTTTTCTTTCTGAAGTTTCGATGTAAAGAGTCCTCTACGAACGCATTTAACTCCATTTGTTAGAATACCTTCCATTGAGTCTCTGCACCTATCCTTTTTTTCTGAACCTTGGATTGTTTTCAGAAAACAGGATTTGGCTCAGGATTGCCCATTTTTGTTAATTCCAGGGTTTCTCTGAATTTGAAACTGATCACTTAGTAATTTTCCATACCAAGGCTCAATCCAATTAAGTCCGTAGCGTCTACCAATTTCGCCATATCTCCCTTTCTTTTTGTTTTGAGATTAGGATCTTGTTGTGATTTCATTCCTTTTTA</gDNA_template>
            <first_frame> L  R  Q  F  Q  I  F  K  D  C  T  F  C  Y  R  L  S  L  T  T  K  D  N  *  G  F  I  G  I  L  T  F  S  W  K  I  L  L  S  D  G  S  H  Q  *  D  E  P  N  E  F  C  I  M  N  F  V  L  R  T  L  L  R  R  V  L  E  R  H  I  G  R  N  G  E  I  E  N  K  E  I  *  Y  E  R  K  A  K  E  M  R  *  Y  Q  I  L  F  L  W  I  *  A  E  C  C  L  F  Q  P  P  *  I  R  I  L  L  L  S  L  S  T  I  N  *  F  Y  L  S  N  M  Y  Y  V  I  K  F  V  *  T  R  G  E  K  K  R  R  *  N  P  I  L  L  D  T  L  S  K  K  L  Y  P  S  M  F  *  M  G  Y  I  S  L  N  W  I  K  L  L  F  *  S  R  L  *  K  N  M  Y  V  D  S  Y  Q  L  I  R  N  S  F  *  G  R  E  T  H  T  N  *  S  C  A  K  N  Q  I  *  T  G  D  T  R  I  F  S  P  L  L  Y  Q  L  S  Y  P  G  Y  S  Q  S  R  L  G  P  L  T  *  G  F  R  V  L  S  I  I  S  S  F  Y  H  I  T  G  V  Y  V  N  *  K  D  K  S  R  L  K  F  F  I  K  A  G  G  F  L  R  S  S  K  I  *  L  C  K  F  *  Y  E  *  *  Y  C  I  D  R  E  S  F  N  *  G  F  L  A  Q  I  C  S  F  L  C  V  S  *  I  S  N  C  D  K  R  K  P  F  T  L  R  K  K  I  H  F  *  K  N  R  V  N  E  K  D  K  E  F  G  T  A  K  E  R  G  S  D  K  *  L  G  S  *  I  V  F  L  G  I  E  G  L  E  P  S  R  F  L  K  S  T  D  F  P  F  N  I  N  F  I  V  A  G  I  D  M  *  N  G  T  L  S  L  F  S  S  D  *  S  D  L  Q  K  I  Y  Q  T  L  E  *  M  I  *  S  M  N  I  R  F  F  L  Q  Y  R  M  D  S  H  Q  F  F  D  F  L  *  K  N  Y  E  F  G  S  S  L  I  I  *  Y  S  I  Q  Y  V  C  I  Y  V  Y  P  S  L  H  S  F  S  F  *  S  F  D  V  K  S  P  L  R  T  H  L  T  P  F  V  R  I  P  S  I  E  S  L  H  L  S  F  F  S  E  P  W  I  V  F  R  K  Q  D  L  A  Q  D  C  P  F  L  L  I  P  G  F  L  *  I  *  N  *  S  L  S  N  F  P  Y  Q  G  S  I  Q  L  S  P  *  R  L  P  I  S  P  Y  L  P  F  F  L  F  *  D  *  D  L  V  V  I  S  F  L  F  </first_frame>
            <second_frame>  L  D  N  F  R  Y  S  R  I  A  R  F  V  I  D  *  A  *  Q  Q  K  T  I  R  D  S  L  E  F  S  H  L  V  G  R  Y  F  F  R  M  G  H  T  N  R  M  N  Q  M  S  S  A  S  *  T  L  Y  C  A  R  Y  L  D  G  F  *  K  G  I  *  E  G  M  E  K  S  R  I  K  K  F  N  M  K  E  K  P  K  K  *  D  N  I  R  F  Y  F  F  G  S  E  L  N  V  V  Y  F  N  P  P  R  F  G  F  Y  F  *  A  F  P  Q  L  T  N  F  T  F  L  I  C  I  T  *  S  N  S  F  E  Q  E  E  K  K  R  G  D  R  I  Q  F  F  *  I  L  Y  L  R  N  S  T  H  L  C  S  R  W  G  I  S  R  *  T  G  *  S  Y  Y  S  N  L  D  Y  K  K  I  C  M  W  I  H  I  N  *  L  E  I  H  S  R  E  E  R  P  I  Q  I  N  H  V  P  R  T  R  F  E  L  V  T  R  G  F  S  V  L  C  S  T  N  *  A  I  P  A  I  P  N  L  D  W  D  R  *  H  E  D  L  E  S  F  P  *  Y  P  H  F  I  I  *  L  G  S  M  S  I  K  R  T  K  V  D  *  N  F  L  S  K  P  G  D  F  F  D  L  Q  K  Y  D  F  V  S  F  S  M  S  N  D  I  V  L  I  G  N  H  S  T  R  D  F  L  L  K  Y  V  H  F  Y  V  Y  H  R  Y  Q  I  V  I  R  E  S  H  L  R  L  E  K  K  S  I  S  K  R  I  E  *  M  R  K  I  R  N  L  E  P  L  R  K  G  G  R  I  N  S  W  G  V  K  *  S  F  W  G  *  R  D  L  N  P  H  D  F  *  S  R  R  I  F  L  L  I  *  I  S  L  L  P  V  L  T  C  R  T  G  L  Y  L  Y  S  R  P  I  N  Q  I  F  K  R  S  I  R  L  W  S  E  *  F  D  Q  *  I  F  D  S  F  F  N  I  E  W  I  H  T  N  S  S  I  F  Y  R  K  T  T  N  S  G  R  H  *  S  F  D  I  V  F  N  T  Y  V  Y  T  F  I  L  H  F  I  L  F  L  S  E  V  S  M  *  R  V  L  Y  E  R  I  *  L  H  L  L  E  Y  L  P  L  S  L  C  T  Y  P  F  F  L  N  L  G  L  F  S  E  N  R  I  W  L  R  I  A  H  F  C  *  F  Q  G  F  S  E  F  E  T  D  H  L  V  I  F  H  T  K  A  Q  S  N  *  V  R  S  V  Y  Q  F  R  H  I  S  L  S  F  C  F  E  I  R  I  L  L  *  F  H  S  F  L </second_frame>
            <third_frame>   *  T  I  S  D  I  Q  G  L  H  V  L  L  *  I  K  P  N  N  K  R  Q  L  G  I  H  W  N  S  H  I  *  L  E  D  T  S  F  G  W  V  T  P  I  G  *  T  K  *  V  L  H  H  E  L  C  T  A  H  V  T  *  T  G  S  R  K  A  Y  R  K  E  W  R  N  R  E  *  R  N  L  I  *  K  K  S  Q  R  N  E  I  I  S  D  S  I  S  L  D  L  S  *  M  L  S  I  S  T  P  L  D  S  D  S  T  F  E  P  F  H  N  *  L  I  L  P  F  *  Y  V  L  R  N  Q  I  R  L  N  K  R  R  K  K  E  E  I  E  S  N  S  F  R  Y  F  I  *  E  T  L  P  I  Y  V  L  D  G  V  Y  L  A  K  L  D  K  A  I  I  L  I  *  T  I  K  K  Y  V  C  G  F  I  S  I  N  *  K  F  I  L  G  K  R  D  P  Y  K  L  I  M  C  Q  E  P  D  L  N  W  *  H  E  D  F  Q  S  S  A  L  P  T  E  L  S  R  L  F  P  I  S  I  G  T  A  N  M  R  I  *  S  P  F  H  N  I  L  I  L  S  Y  N  W  G  L  C  Q  L  K  G  Q  K  S  I  K  I  F  Y  Q  S  R  G  I  S  S  I  F  K  N  M  T  L  *  V  L  V  *  V  M  I  L  Y  *  S  G  I  I  Q  L  G  I  S  C  S  N  M  F  I  S  M  C  I  I  D  I  K  L  *  *  E  K  A  I  Y  A  *  K  K  N  P  F  L  K  E  *  S  E  *  E  R  *  G  I  W  N  R  *  G  K  G  V  G  *  I  V  G  E  L  N  S  L  F  G  D  R  G  T  *  T  L  T  I  F  K  V  D  G  F  S  F  *  Y  K  F  H  C  C  R  Y  *  H  V  E  R  D  S  I  F  I  L  V  R  L  I  R  S  S  K  D  L  S  D  F  G  V  N  D  L  I  N  E  Y  S  I  L  S  S  I  *  N  G  F  T  P  I  L  R  F  F  I  E  K  L  R  I  R  V  V  I  N  H  L  I  *  Y  S  I  R  M  Y  I  R  L  S  F  T  S  F  F  F  F  L  K  F  R  C  K  E  S  S  T  N  A  F  N  S  I  C  *  N  T  F  H  *  V  S  A  P  I  L  F  F  *  T  L  D  C  F  Q  K  T  G  F  G  S  G  L  P  I  F  V  N  S  R  V  S  L  N  L  K  L  I  T  *  *  F  S  I  P  R  L  N  P  I  K  S  V  A  S  T  N  F  A  I  S  P  F  L  F  V  L  R  L  G  S  C  C  D  F  I  P  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="30" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59487" stop="59272"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NFLSKPGDFFDLQKYDFVSFSMSNDIVLIGNHSTRDFLLKYVHFYVYHRYQIVIRESHLRLEKKSISKRIE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="31" PGL_strand="+" PGL_start="59143" PGL_stop="59316"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59143" e_stop="59316"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.925">
            <gDNA_exon_boundary e_start="59143" e_stop="59316" e_length="174"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59143" stop="59316"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596597" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="31" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGGAAAATCCGTCGACTTTAAAAATCGTGAGGGTTCAAGTCCCTCTATCCCCAAAAAGACTATTTAACTCCCCAACTATTTATCCGACCCCCTTTCCTTAGCGGTTCCAAATTCCTTATCTTTCTCATTCACTCTATTCTTTTAGAAATGGATTTTTTTTCTAAGCGTAAATG</gDNA_template>
            <first_frame> K  E  N  P  S  T  L  K  I  V  R  V  Q  V  P  L  S  P  K  R  L  F  N  S  P  T  I  Y  P  T  P  F  P  *  R  F  Q  I  P  Y  L  S  H  S  L  Y  S  F  R  N  G  F  F  F  *  A  *  M </first_frame>
            <second_frame>  R  K  I  R  R  L  *  K  S  *  G  F  K  S  L  Y  P  Q  K  D  Y  L  T  P  Q  L  F  I  R  P  P  F  L  S  G  S  K  F  L  I  F  L  I  H  S  I  L  L  E  M  D  F  F  S  K  R  K   </second_frame>
            <third_frame>   G  K  S  V  D  F  K  N  R  E  G  S  S  P  S  I  P  K  K  T  I  *  L  P  N  Y  L  S  D  P  L  S  L  A  V  P  N  S  L  S  F  S  F  T  L  F  F  *  K  W  I  F  F  L  S  V  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0223O24.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="32" PGL_strand="-" PGL_start="62768" PGL_stop="62048"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62768" e_stop="62048"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.953"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.953">
            <gDNA_exon_boundary e_start="62768" e_stop="62048" e_length="721"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62768" stop="62048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585782" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="32" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGAAATGCAAAACTACGACGAGGAATTCACATGGATTTAGGAAAGGCCTGCTATATTTGTGTACAAGCTAAGGTTTTTTGAAAAATGAATATCTTTGGTATCTTTCATTGTCAAATAGGCTTTTCCTTCGTATACCTTACTTACCTCGACCTAGCGAAGCACAACAAAAAAGGTAGTCTTCTTTTTCTGTATTCAACCAAGAAAAACCCCTCCACCTGGATTCGAATCCTAATAATATTATTAAATGTTAATTCAATAATAATAAAAGGAATATACCAACACAAGATCTTCTAAATCTTGAGATGGCAATTCCTATACATTCTCTTCTATTTGATTACGTGTTCTATTCTAAATCACTAAGAAAAAAATGAAAATAAAGACCTCCTGATTCTATTTATAGAAATAAATAGAAATCTTTAAAGAATTTATAATTAAAGAAGAAATCAGATAAGTAATTAATTTAGAATTCCCCATTTTTAGAGAAAAAAACAAGAGAAACAGGAGAATTTGTCGAAGAGTAATATATAGTTAGAAGGTTCTACTAACTAAATAAAATGGAAATAAGTATAATGGAAATAAAATCGAATTCCAGTCGATGAATCTTGCAATGAGATATGCCCTACAATAAACGAATAAACAAAGCAAACTAGTCGGTTCGGCCAAAATGAATTCTTGTTTTGACTAAATAGTTATGGATGACTTGACAATTCCAATTCGAAT</gDNA_template>
            <first_frame> V  K  C  K  T  T  T  R  N  S  H  G  F  R  K  G  L  L  Y  L  C  T  S  *  G  F  L  K  N  E  Y  L  W  Y  L  S  L  S  N  R  L  F  L  R  I  P  Y  L  P  R  P  S  E  A  Q  Q  K  R  *  S  S  F  S  V  F  N  Q  E  K  P  L  H  L  D  S  N  P  N  N  I  I  K  C  *  F  N  N  N  K  R  N  I  P  T  Q  D  L  L  N  L  E  M  A  I  P  I  H  S  L  L  F  D  Y  V  F  Y  S  K  S  L  R  K  K  *  K  *  R  P  P  D  S  I  Y  R  N  K  *  K  S  L  K  N  L  *  L  K  K  K  S  D  K  *  L  I  *  N  S  P  F  L  E  K  K  T  R  E  T  G  E  F  V  E  E  *  Y  I  V  R  R  F  Y  *  L  N  K  M  E  I  S  I  M  E  I  K  S  N  S  S  R  *  I  L  Q  *  D  M  P  Y  N  K  R  I  N  K  A  N  *  S  V  R  P  K  *  I  L  V  L  T  K  *  L  W  M  T  *  Q  F  Q  F  E  </first_frame>
            <second_frame>  *  N  A  K  L  R  R  G  I  H  M  D  L  G  K  A  C  Y  I  C  V  Q  A  K  V  F  *  K  M  N  I  F  G  I  F  H  C  Q  I  G  F  S  F  V  Y  L  T  Y  L  D  L  A  K  H  N  K  K  G  S  L  L  F  L  Y  S  T  K  K  N  P  S  T  W  I  R  I  L  I  I  L  L  N  V  N  S  I  I  I  K  G  I  Y  Q  H  K  I  F  *  I  L  R  W  Q  F  L  Y  I  L  F  Y  L  I  T  C  S  I  L  N  H  *  E  K  N  E  N  K  D  L  L  I  L  F  I  E  I  N  R  N  L  *  R  I  Y  N  *  R  R  N  Q  I  S  N  *  F  R  I  P  H  F  *  R  K  K  Q  E  K  Q  E  N  L  S  K  S  N  I  *  L  E  G  S  T  N  *  I  K  W  K  *  V  *  W  K  *  N  R  I  P  V  D  E  S  C  N  E  I  C  P  T  I  N  E  *  T  K  Q  T  S  R  F  G  Q  N  E  F  L  F  *  L  N  S  Y  G  *  L  D  N  S  N  S  N </second_frame>
            <third_frame>   E  M  Q  N  Y  D  E  E  F  T  W  I  *  E  R  P  A  I  F  V  Y  K  L  R  F  F  E  K  *  I  S  L  V  S  F  I  V  K  *  A  F  P  S  Y  T  L  L  T  S  T  *  R  S  T  T  K  K  V  V  F  F  F  C  I  Q  P  R  K  T  P  P  P  G  F  E  S  *  *  Y  Y  *  M  L  I  Q  *  *  *  K  E  Y  T  N  T  R  S  S  K  S  *  D  G  N  S  Y  T  F  S  S  I  *  L  R  V  L  F  *  I  T  K  K  K  M  K  I  K  T  S  *  F  Y  L  *  K  *  I  E  I  F  K  E  F  I  I  K  E  E  I  R  *  V  I  N  L  E  F  P  I  F  R  E  K  N  K  R  N  R  R  I  C  R  R  V  I  Y  S  *  K  V  L  L  T  K  *  N  G  N  K  Y  N  G  N  K  I  E  F  Q  S  M  N  L  A  M  R  Y  A  L  Q  *  T  N  K  Q  S  K  L  V  G  S  A  K  M  N  S  C  F  D  *  I  V  M  D  D  L  T  I  P  I  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="-"/>
                <serials PGL_serial="32" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62686" stop="62474"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMNIFGIFHCQIGFSFVYLTYLDLAKHNKKGSLLFLYSTKKNPSTWIRILIILLNVNSIIIKGIYQHKIF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="33" PGL_strand="-" PGL_start="63124" PGL_stop="62964"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="63124" e_stop="62964"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.950"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.950">
            <gDNA_exon_boundary e_start="63124" e_stop="62964" e_length="161"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63124" stop="62964"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599093" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="33" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGAGAAGGTCTACGGTTCGAGTCCATATAGCCCTATAAAAATGAAAAATGCAAAAAAATTTTTGTATAATTTGCATTTCTTCATTATTATTTCTTGCTTGTAACTAAATGAAACCCAATTATTCCTATAAGTTTACTCACGGCAATCGTTTAAGCAGATGA</gDNA_template>
            <first_frame> R  E  G  L  R  F  E  S  I  *  P  Y  K  N  E  K  C  K  K  I  F  V  *  F  A  F  L  H  Y  Y  F  L  L  V  T  K  *  N  P  I  I  P  I  S  L  L  T  A  I  V  *  A  D   </first_frame>
            <second_frame>  E  K  V  Y  G  S  S  P  Y  S  P  I  K  M  K  N  A  K  K  F  L  Y  N  L  H  F  F  I  I  I  S  C  L  *  L  N  E  T  Q  L  F  L  *  V  Y  S  R  Q  S  F  K  Q  M  </second_frame>
            <third_frame>   R  R  S  T  V  R  V  H  I  A  L  *  K  *  K  M  Q  K  N  F  C  I  I  C  I  S  S  L  L  F  L  A  C  N  *  M  K  P  N  Y  S  Y  K  F  T  H  G  N  R  L  S  R  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0223O24.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="34" PGL_strand="+" PGL_start="64114" PGL_stop="64605"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64114" e_stop="64605"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="64114" e_stop="64605" e_length="492"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64114" stop="64605"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576640" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="34" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTGGATTCTGTTTGATTGTATTCACCCGACAGAATCTAAATAGGATTAGAAAGAGAACTTCTTTTTATTATTCGAACGTACCAACTAGTTATGAAATCGGATTGCTAGCCTCCACCCGTGTTCTAGCTCGTCGGAGAGCTAGATTTGCCTCAATTTTTTGTCTCCTTCCTTCAGCCTTTTTCACATTAGCTTCCGCTATTTCAAGAGTTTGCTGAGCTTCTTGTGGATTAATGTCACTACCCTTCTCCGCATCATTTACTAAAACAGTGATCTCATTATTTCCTATTCTAGCAAAACCACCCATCAGAGCCATCGTTAACCATTGGTCGTTAAGGCGTATTCTCAAAATCCCTAGATCTACAGCTGTGGCAATAGGGGCGTGATTTGGTAATATGCCAATTTGACCACTATTAGTAGATAAAACAATATCTTCCACTTCTGAATCCGAAACAATTCGATTAGGGGTCAGTACACTAAGATTTAAGGTCAT</gDNA_template>
            <first_frame> N  W  I  L  F  D  C  I  H  P  T  E  S  K  *  D  *  K  E  N  F  F  L  L  F  E  R  T  N  *  L  *  N  R  I  A  S  L  H  P  C  S  S  S  S  E  S  *  I  C  L  N  F  L  S  P  S  F  S  L  F  H  I  S  F  R  Y  F  K  S  L  L  S  F  L  W  I  N  V  T  T  L  L  R  I  I  Y  *  N  S  D  L  I  I  S  Y  S  S  K  T  T  H  Q  S  H  R  *  P  L  V  V  K  A  Y  S  Q  N  P  *  I  Y  S  C  G  N  R  G  V  I  W  *  Y  A  N  L  T  T  I  S  R  *  N  N  I  F  H  F  *  I  R  N  N  S  I  R  G  Q  Y  T  K  I  *  G  H </first_frame>
            <second_frame>  I  G  F  C  L  I  V  F  T  R  Q  N  L  N  R  I  R  K  R  T  S  F  Y  Y  S  N  V  P  T  S  Y  E  I  G  L  L  A  S  T  R  V  L  A  R  R  R  A  R  F  A  S  I  F  C  L  L  P  S  A  F  F  T  L  A  S  A  I  S  R  V  C  *  A  S  C  G  L  M  S  L  P  F  S  A  S  F  T  K  T  V  I  S  L  F  P  I  L  A  K  P  P  I  R  A  I  V  N  H  W  S  L  R  R  I  L  K  I  P  R  S  T  A  V  A  I  G  A  *  F  G  N  M  P  I  *  P  L  L  V  D  K  T  I  S  S  T  S  E  S  E  T  I  R  L  G  V  S  T  L  R  F  K  V   </second_frame>
            <third_frame>   L  D  S  V  *  L  Y  S  P  D  R  I  *  I  G  L  E  R  E  L  L  F  I  I  R  T  Y  Q  L  V  M  K  S  D  C  *  P  P  P  V  F  *  L  V  G  E  L  D  L  P  Q  F  F  V  S  F  L  Q  P  F  S  H  *  L  P  L  F  Q  E  F  A  E  L  L  V  D  *  C  H  Y  P  S  P  H  H  L  L  K  Q  *  S  H  Y  F  L  F  *  Q  N  H  P  S  E  P  S  L  T  I  G  R  *  G  V  F  S  K  S  L  D  L  Q  L  W  Q  *  G  R  D  L  V  I  C  Q  F  D  H  Y  *  *  I  K  Q  Y  L  P  L  L  N  P  K  Q  F  D  *  G  S  V  H  *  D  L  R  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0223O24.1" strand="+"/>
                <serials PGL_serial="34" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64115" stop="64330"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IGFCLIVFTRQNLNRIRKRTSFYYSNVPTSYEIGLLASTRVLARRRARFASIFCLLPSAFFTLASAISRVC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 57 chains have been computed
$ 
$ memory statistics:
$ 77272 bytes spliced alignments in total
$ 37 spliced alignments have been stored
$ 2088 bytes was the average size of a spliced alignment
$ 48688 bytes predicted gene locations in total
$ 34 predicted gene locations have been stored
$ 1432 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 64 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:08:54
-->
