<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:15:33"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E296334" ref_strand="+" ref_description="SGN-E296334 [cLET-19-P5]">
      <seq>agaaattggtgctgttttggccgttatgaggagaaatgtaaggtgggggttccattatgctgctgctgatgatcagctagagcatcctctcatacattctttcaaggaattacggaaaaatgtcttctcatggaaacatcactggaacagagttgatccactcctatatcttcagcctttcttggatgtgattcaatctgatgaaactggtgcaccaataaccggtgttgcactgtcttctgtttacaaattcttaacccttgaaataattgattcatctatcatgaatgtggagaaagctttatatcagatagttgagaccgtgacaagttgccgctttgaagtgactgatcctgcctctgaggaagtggtactgatgaagatacttcaggttcttttggcttgcatgaaaagtaaggcatcagaaaatttaagtaatcatcacgtgtgcaacattgtaaacacttgctttcggcttgctcatcaagctagtgccaaaagtgaactgctgcagagaatagcaagacacacaatgcatgaattggtgagacacattttcgctcacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="6114" stop="4948"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5814" g_stop="5248" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="567" r_length="567" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E296334" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E296334" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5814" e_stop="5248"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTGGTGCTGTTTTGGCCGTTATGAGGAGAAATGTAAGGTGGGGGTTCCATTATGCTGCTGCTGATGATCAGCTAGAGCATCCTCTCATACATTCTTTCAAGGAATTACGGAAAAATGTCTTCTCATGGAAACATCACTGGAACAGAGTTGATCCACTCCTATATCTTCAGCCTTTCTTGGATGTGATTCAATCTGATGAAACTGGTGCACCAATAACCGGTGTTGCACTGTCTTCTGTTTACAAATTCTTAACCCTTGAAATAATTGATTCATCTATCATGAATGTGGAGAAAGCTTTATATCAGATAGTTGAGACCGTGACAAGTTGCCGCTTTGAAGTGACTGATCCTGCCTCTGAGGAAGTGGTACTGATGAAGATACTTCAGGTTCTTTTGGCTTGCATGAAAAGTAAGGCATCAGAAAATTTAAGTAATCATCACGTGTGCAACATTGTAAACACTTGCTTTCGGCTTGTTCATCAAGCTAGTGCCAAAAGTGAACTGCTGCAGAGAATAGCAAGACACACAATGCATGAATTGGTGAGACACATTTTCGCTCACCT</genome_strand>
        <mrna_strand>AGAAATTGGTGCTGTTTTGGCCGTTATGAGGAGAAATGTAAGGTGGGGGTTCCATTATGCTGCTGCTGATGATCAGCTAGAGCATCCTCTCATACATTCTTTCAAGGAATTACGGAAAAATGTCTTCTCATGGAAACATCACTGGAACAGAGTTGATCCACTCCTATATCTTCAGCCTTTCTTGGATGTGATTCAATCTGATGAAACTGGTGCACCAATAACCGGTGTTGCACTGTCTTCTGTTTACAAATTCTTAACCCTTGAAATAATTGATTCATCTATCATGAATGTGGAGAAAGCTTTATATCAGATAGTTGAGACCGTGACAAGTTGCCGCTTTGAAGTGACTGATCCTGCCTCTGAGGAAGTGGTACTGATGAAGATACTTCAGGTTCTTTTGGCTTGCATGAAAAGTAAGGCATCAGAAAATTTAAGTAATCATCACGTGTGCAACATTGTAAACACTTGCTTTCGGCTTGCTCATCAAGCTAGTGCCAAAAGTGAACTGCTGCAGAGAATAGCAAGACACACAATGCATGAATTGGTGAGACACATTTTCGCTCACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E747551" ref_strand="+" ref_description="SGN-E747551 [GI|7672781]">
      <seq>ggcacgaggtggaaggaaaacatcaaaggaaaatggacggaacagcagtgcagggcaccagcagtgttgactcatttttacggaactataaactcgggaaaacacttggcattggatcgttcggcaaagttaaaatagctgaacatacgttaacagggcacaaagttgctgtcaagattcttaatcgtcgaaaaatcaggaatatggacatggaggagaaagtccgtagagaaatcaaaatattgagattgttcatgcatcctcatattatacggctttatgaggtcatagagacaccatcagatatatatgttgtgatggagtatgtgaaatctggcgagttatttgattacattgttgagaagggcagattgcaggaggatgaagctcgtaacttttttcagcagataatttctggtgtggagtactgccatagaaacatggtggttcatagagaccttaagcctgaaaacctccttctggactccaaatggaatgtgaagatcgcagattttggtttgagcaatatcatgcgcgatggtcattttctgaagacaagttgcggaagcccaaactatgctgccccagaggttatatcaggtaaattgtatgctggccctgaggtagatgtatggagctgtggtgttattctttatgctcttctctgtggcacccttccgtttgacgatgaaaacatacccaatctttttaagaaaataaagggtggaatatatactctgcccagccatttatcagctggtgcgagggatttgattccgaggatgcttatagtcgacccaatgaagcgaatgactattcctgagattcgcctgcacccttggttccaagctcatttgccacgctatttggccgtgcctccaccagatacaacccaacaagcaaagaagatcgatgaagagattcttcaagaggtggttaagatgggatttgacaggaacaaccttactgagtctcttcgcaatagagttcaaaatgagggcactgttgcatactatctgctcctggacaatcgccatcgtgtttccactggctatcttggagctgaatttcaggagtccatggaatatggttacaaccggatcaattctaatgaaaccgctgcttcccctgttggtcaacgtttcccaggaataatggattatcagcaagctggtgcaagacagttccccattgaaagaaaatgggctcttggcctccagtctcgagcgcatccacgtgaaataatgactgaagttttgaaagctctgcaagaactgaatgtatgttggaaaaagattggtcagtataacatgaaatgtcgatgggttcctagcttacctggtcatcatgaaggcatgggtgttaattccatgcatgggaatcagttctttggagatgattcatccatcattgagaatgatggggccacaaagttaacaaatgtggtcaagtttgaagttcagctttacaaaaccagggaggagaagtacttgcttgaccttcagagacttcagggtccacaattcctcttcctggatctctgtgctgcttttcttgctcagcttcgagtactttaaagtctccgaaataaggagctaagttggaaaaagcccatgcttgtatataattggtataccagctcagttactgcattttgtcttgttaacaaattccaccctgcttggtcagaggtgcctagcaactctttttttcttttgattcgctaggagatctagctcactctcttttttaacgtttatggaatttcagttacctacagtatctacttacagattgaactgcaagatgagcgcgatgtctgtctgtgacccattccctcttctccccttatcgacgatcatttggagtccaacgaagattttcttgtgtcaaatttgaaatgtttgtctgaataaaaacaagtcccaacaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="23164" stop="10673"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22872" g_stop="22845" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="0.750"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22844" i_stop="20932" i_length="1913">
            <donor d_prob="0.949" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20931" g_stop="20738" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="222" r_length="194" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20737" i_stop="20189" i_length="549">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="20188" g_stop="20004" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="407" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="20003" i_stop="19916" i_length="88">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19915" g_stop="19733" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="590" r_length="183" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19732" i_stop="16607" i_length="3126">
            <donor d_prob="0.906" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="16606" g_stop="16475" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="722" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="16474" i_stop="15881" i_length="594">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="15880" g_stop="15695" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="723" r_stop="908" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="15694" i_stop="13462" i_length="2233">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="13461" g_stop="13372" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="909" r_stop="998" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="13371" i_stop="13301" i_length="71">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="13300" g_stop="13217" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="999" r_stop="1082" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="13216" i_stop="12990" i_length="227">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="12989" g_stop="12852" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1083" r_stop="1220" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="12851" i_stop="12430" i_length="422">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="12429" g_stop="12187" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="1221" r_stop="1463" r_length="243" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="12186" i_stop="11441" i_length="746">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="11440" g_stop="10974" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="1464" r_stop="1930" r_length="467" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1931" polyA_stop="1948"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E747551" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1930</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E747551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22872" e_stop="22845"/>
          <exon e_start="20931" e_stop="20738"/>
          <exon e_start="20188" e_stop="20004"/>
          <exon e_start="19915" e_stop="19733"/>
          <exon e_start="16606" e_stop="16475"/>
          <exon e_start="15880" e_stop="15695"/>
          <exon e_start="13461" e_stop="13372"/>
          <exon e_start="13300" e_stop="13217"/>
          <exon e_start="12989" e_stop="12852"/>
          <exon e_start="12429" e_stop="12187"/>
          <exon e_start="11440" e_stop="10974"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGATTCTGTGGAAGGAAAACATCAAAGGTTTGATTCTGTCAAGACAACAATTTTTAGAATTGTAATCATAATTTATTTTAGGTTATAAATAATAAAACATAGAATCTTTTTTAAAAAAATTGTTTAATTCTATAACATAGAATCTAATTAATTTAATCAAATTTAATTTAATTAATTAATTATTATCAATAATTAGTTTCTAGTATTTTTAAGAAGTTTTTTTTTTTCTGTGAATACCAGGGGGGAAAAATTAACAGAATCAAAAATCAGTGAACTCCATTCTTGTGCTTCTGCAGCCATCCTTACCCCCACCCCCCGAATCTCCTCCACCCCACGACTGGCCTCAACTTCTTCCCCCTGTATTCCAGGAGGCCATTGATACTCTCTTTCATCACCAAATGTTGAAGATAATCGCTTGATTTTCCCAATTTTCATATTTTGTTGTTGAATTTCTTCAATCTGCTTCTTGGGGTTTAGCTTCTGCCAGGTGGGTTTGCATGTTTGATTTCGTTTTTATTGGTAAAAAATTTATTCTCTATCAATATTTATCAGATCTGTTCTTGCTAGGGTTTTTTTCAAGAATATGACCGGTTGGGGGGTTAGATAATTGGGTAATTTCAAGATTTGGTTTTGGGGTTATGGGATTTGATTGTTTTTCGGCATTTAGGGTTATAAACGGGGTGGGGTTGGGGATTAATTCGACATTTGACTATGGGGTTGTGAATTTCTTTATCAAGTTAGCTCCTTTTCATTTTTTTTAGGGTGTGGGTACTGTTTATTGAGAATTTCTCTGTCGATTTTTTGAGAATTTGAGTGATAAAACGTGCCAATTTTAGCATAGGTGGGGTGGGGGTGGGGTAATTGAAGCTTTGTGACAGGTAGTGAGATCATGATGCCTTAGGTTTGGCTCCTCATTAGCATTTGGGTCTGTGTTTAAAGTATATGTTGGTATTATTCTTACTAGTGTGTTAAAGAGGGTGTCTATCGATACCTGTTGGTGAATTGTAAATTTTGGAAATATATTCCAACTTATGGGCAAAAAGAAATTACTATAGGGAGATTACAATCCAATTATAGATAAGACATTACTGACGATTAGTTTTATTTGAAAAGACATTATTTATGTACCTTTTAGGCCTTCAAAATTCTTCCTCTTTCAGTTATCATGGAAAGAGAAAGGTATATATGTTGTTCTAAAAATGCAATCTTTGGCACCCCGAAGCACCGGCAAAGGTATATATGTTGTTCTAAAAATGATGGCTTACTATCGTTTGTCACTTGAGACAATTAAGCTCCCTACAGATACTAGTATATGCAACTTTGGTAGATGAGTTAGGCAGTTGTGCATTGTGCCTATATTGCTCGGATTCTTCAAAATCCTAGTCACACACGCAACGTAGGTGTGGGATCTGCACTGGATTTGGTTAATTTACCTTGGGAGTACTTTGACCACATTTATGACTGAAAACTTCTAGTTCAATAGCTTTAATTAATCAAAAAATATTCTTTATATGTCATAATCTACATTTATTGGCATATCTCAGCACCCGTACCCGTACTTGAATCCATACCCCAAATCCTAAAACTTATGTGATGATGAATCTAACTGTCAGATCCGCACCCGTATCAATTACCCGCACCCGAATCCGAGCAACTTAGCATTGTGCTTTCGGAGTATCTTCGCTTCCAAGGAAGAATCCATTTTGAAAATAATCTCAAATTTATTACTCACATCTAGCAATTAATTATGGTACTAGCTAGTAATTTGTTGGAGGTAGCCAGCGTATTCTTAACGCTGAAGAATATAACTTTACCTTTCTAAAACAAATCTAGCTATCAAATTTTTCTTTTTGAGTGTTATTACAGGCGGAGGTACCTTTTGGAGTGTTTTTTGTGCCTTTTCTAAATCTAATTTGCCTCTAATTTTCTTGTGTTGATAGGAAAATGGACGGAACAGCAGTGCAGGGCACCAGCAGTGTTGACTCATTTTTACGGAACTATAAACTCGGGAAAACACTTGGCATTGGATCGTTCGGCAAAGTTAAAATAGCTGAACATACGTTAACAGGGCACAAAGTTGCTGTCAAGATTCTTAATCGTCGAAAAATCAGGAATATGGACATGGAGGAGAAAGGTATAGAAGTTAGAGAGTGCAGTCACATTCTCCCTTACTATCCAAAGTATATGAACATCGTTTCTCCTTTTTACCCCTAATTTTTAAGGTAAAAAGGGTAAGAAGTGGTGAGGTTTGAAGAAGGACAAACTGAATCTTGCAAGATGAAGATTGATGTTTAACCTAATGTTTGGCCTGTTTGTTCCTTTTAATATTTGTTTTTTTCTGTTCTATCTGACCTGGAACCTATATAAATGGATGATTAGATTGTCAATTGATTTGAATGTGGTTGAATTTTTCTTCTACTTTAATTTAAACGATAATCTTTGATTCTTTTTCACTCAAAATTTGCATTGAACTCCATATATGAAATTTTTGTTCTCAAATCTCTAGGTGTTTGTGGTTTGATTAGACTAGTGCCCAGTAGGATATACCTTGATGGAGGATGATTTTTGTTCTGAATGATTGGACATTGCTTGCTCTTGGTTCTAGGCTACAATTGTATATTTTTTTTCCTGTTTATGGATGTCTGGACTGTGTTAAGAGTTTTATATTGCTGAAATTCTGCAGTCCGTAGAGAAATCAAAATATTGAGATTGTTCATGCATCCTCATATTATACGGCTTTATGAGGTCATAGAGACACCATCAGATATATATGTTGTGATGGAGTATGTGAAATCTGGCGAGTTATTTGATTACATTGTTGAGAAGGGCAGATTGCAGGAGGATGAAGCTCGTAACTTTTTTCAGCAGGTGGATGTGCCACTTCCTTGAATGAGTTTTTTCATGCTGTTTAACTTTTTTAAAGTAGTTATGGTATTCTAATTCTTCTAAAAAACAGATAATTTCTGGTGTGGAGTACTGCCATAGAAACATGGTGGTTCATAGAGACCTTAAGCCTGAAAACCTCCTTCTGGACTCCAAATGGAATGTGAAGATCGCAGATTTTGGTTTGAGCAATATCATGCGCGATGGTCATTTTCTGAAGACAAGTTGCGGAAGCCCAAACTATGCTGCCCCAGAGGTACTGAAGCTTCTGATTCGAGTTAACAGCAATTACTTTTTGTGGTTCTGCCTAACTGATTGAAAAAAGAGTTGTGATTCATCACAATACTTAGAATGTATGCTGCATTTTGACTTGTCAGTATTTTTTTACATGCTCAATACATAGTCTAACCCCCCTCCCCCACCCACCCAAAAATGCTGTGTACTCAAATCCCTTTTACACACCCCTTGATAATGGGAATCATTGGAGTGGGAAAATTTTCTTGAAATTGGTAATAACAATATAATTTAATGGCCAAGAGGAGGAGAAGAAACAATCCAAATGGTTCCCAGATTAGTTTCGTTTAAATAGATTTGTCTATTTCAAAGTGAGGAAGAAGAAGAAGAAGAATGTGGAAGAATAATATTTGATTAATTTTTGATCTTTTTACAATTTCTGAAGTATTTTTCTTTTTCTATATTGTGAAATGTTTTGGGTTGTGATTGGTGTGTGAAATACACTTATCAAAGGAAAGTGATGAAACATAAAAATGGTGTGTATTAGACATAGGGGTGTCATATTAGGCCCAAACCCATTTGGCCCGCACATGTTTTGAATGGTTTGGGCATGGGCTACATACAAATGAGTTACGTTTGGGTTCTACTCATTTTAACCCATGAAGGAAGCTAAGCCCAAACTCAACCCATCATTTTTCATTTTTTTTTGAAGACAAAGGAAACCGATAGTTGCTATCCTTTGGGTGTGCACATGGTAAGACCCCGCTTTTATGCAATAGCTCGCAAACCACACATGAGCGGTGATTCACACTAGGCAATCCGGTGCGACGAGCTCCACCCAGAAGGCAAACCTATTGCTTTTGTCGGTTTTGAACTTGAGACCCCCAAAATGGAAGTCCCGCCCAAACCATTTGGCCATCCCGAAGGGTATAATTTTTCAAACTTCAATGTCAATAATTAGAGTTAAACTCATGATTATCCAAGATAAATGTCAAGTTGTCATCATTTGGATTATCTTTATGACTTTTATTTTTTTTGACCTTTTAAGTCAATTAAATAAAAGAAGAATGTCACTATGTGGAGATTTTATGCAACATATAATTAATGATGATATTACTTTTTTAAATTTATTTAAGTTTTTTGACCTTTTCAATGGCTTAACAGGAAGTCCTATTTACTTTCATCATCTTTTTTTTGGGTTATATTTCCCTTTATTATTAGATGTTTGTTTTTGGTCAAGTCATATTAGAATAAATTTATTAATTCAAAGTCTATACAACTATAAAGATTAAAATGTCAGGAATAGATATATGTTTCATATTGAATTTAATGATAATCACCATCAATATTTTAAATGGCGGACTTATAATTTATATATTTATTTGCTGGGATATGAATGAGCATCTTTTTCCACTTTTTGTTAAAAAAATTAGTTTAAGGAGTTGCCTATTTAGAAGGTGTTTGGATTGGCTTAAAAGTTGGTCAAACCTACTTTTAAGTCAGTTTTAGACTTCAAAAAGTGTTTTGGCAAATATAAAAAATAACTTACAATTAGTCAAAAATGACTTAAAATAAATAAAGAAGTGTTTGACAAGGTTAAAAATGACTTAAATAAGTTAAAAATGACTTTAAATAAGTCAAAAATCAAAAGTAGGTCTCCCCCTACTTTTTATTTTTCGACTTAAAAATCATTTTATTTCAACTTTTTATTTTTGACTTAAAAACTACTTTTTTTTTATGCCAATCCAAAAGGCTCTTAGGCAATTCTATATTTCGGTACGGTCTTACCCTATAGGGTGATTTTGTTTTTGGTAAAAGAAAGAGAAATAATGTCTTTCTTTTACTCTTTAAAAAACATATTTTTTTTGTTGGACAAGTTTATCATTCAATTATTTTCTAATATTTAATAATTTAAAATCAACATTAAATCTTTACTAACTTAAACCATTTTAGATTTATTTTATTTCTTCTAACGAATATCAATTTGAACAGGAATCAATTATGATTTTTACGCCAACAAGGGTTGTGGTGAAACCAAGACCTCTAGGGTATGGAGTCGTCTTTGTTAGTGCTGTTAGGGAGCACTGTATCCCCAATGTGGGACTTTCGGGCACAAATCGGAGTTTAGTTGGGCTCCAATGTAGGGCACCAAATGGGAAACCAAAATAAATACATATGATTTTTACATATTAATATTAAATGCAAGATGCATAAAAGTTATATGCATTAATCATTCTCAAAAAATAAAAGTTATATGCATTAAATAGGATTTTGACCAATTATAGTTTTGTCCCAAATTAAAAGTCTACATATATTTTAAATGTATATCATCAATAGAATTGATGTCAGACACAAACAAATCATTTATTTAAATGCTCAATTCAAACTACAAACATCACCAAGGAAAAATTCCAAATATTTCTAAATTGTAACCATTTAGGACTAACTTTTTACTATAAGTATATAGGTATGGAGATCTGTTTGTGGATATTCGGTTGAGAATGTTTATTGATATCTTTAAAAGGAAAGAACAAAACTTGTATCAAGTTGGGCGGGCTGGGCTGTGGCGAGGGGCGAATGTAGGCCCAAATTATGTTGCGCGTGAACGCATGGTCTCTCTGCAAATTAGATATTTTTTGTACATATTCTTGAATTGATCTAATATTCTCTGATGACTCTCATACTCCAAAAAACTTGAATGGTGTATTTGGTTCAATGTTGAGTTTTGTACCCCAAGGTCTAGGGATCAATTCCTACTTACTACTCTCTTTTTTCTCTTTTTCTTTTAAAGTTGTGCACCCATGTTCTAGAAATCATAGATCCGCTCTGGCTATGACCCGTCATTTAGCTCATCTTGACCCAACTCATTTTAGCCAAGTAGGCTATGGGCATGGTTGAGCAAATGACCCATTTGTGGATTCAACCCATCTTAGCCCAAACAACCGATTTGCCACCCCTTAGGCATACTTTCTGGAAATGTTTGGTGTGTAAAGTTATTCCCATGGTTAAAGCGGCATATAAAATGGATTTGGTTACAACCTTGGGCTGTAAACTATGTATTGAGTCTTTTTTCCCTTTAAAAAGTGCTTTTTATGCTCAATTGGTTTTTTTTTTTGATAACCATTAAATTCTTTCTCTCTCTCTGTAGGTTATATCAGGTAAATTGTATGCTGGCCCTGAGGTAGATGTATGGAGCTGTGGTGTTATTCTTTATGCTCTTCTCTGTGGCACCCTTCCGTTTGACGATGAAAACATACCCAATCTTTTTAAGAAAATAAAGGTATATTTTAGTTTACTTGAAATCCAGCATGTTAATGTTGATCCTTCTATCAATTTTATCCTATATTGATTTAGCTGCCCCGTGGCTTGAAATTGTGTGTTCCCAAATCTGCGACCTGATTGTAGTCCGACCCCGTTTCATGTTGGCGTTCAATTTTATTTGGTGGATAAAGGACTACAACTTTTGGCCCCATATCCAAACTTTCATTATTGCATACATAATAAGTCGGATGTTGTGTGGGTAGCTCCACTTTTCGTTGATGAGACTTGAGTATGTTACTGATTTATCCCATTTTACTATGCTGGTCAACTCTTTGTTTTCCAGTTCTGCCCTTCCAAATGTATCATGTCCAGGAAAAAAACAAAGATTGTTTAGATCTGCTGGGACCCAATCTCACCCTTTTTGTTGTTTTGGGTAAGTGGACATGATGTGAAATGTCAAATGGAAAAGGAAAAATGAAAACGATTCTCCATTGGAATGAATTTATGCTCCCTGTCTGTTCCCCAAAAAAGGGAGAGATTAGTTGATACATTTATTGAATCCATTGGGGTTGATCGCAGACAATTGCTTAACTTTATATCAATTTGTCTTTAGGGTGGAATATATACTCTGCCCAGCCATTTATCAGCTGGTGCGAGGGATTTGATTCCGAGGATGCTTATAGTCGACCCAATGAAGCGAATGACTATTCCTGAGATTCGCCTGCACCCTTGGTTCCAAGCTCATTTGCCACGCTATTTGGCCGTGCCTCCACCAGATACAACCCAACAAGCAAAGAAGGTTAGATTGAATGTACATTTGACTATTAATGATTAGTGTTTTTCTGCCTTAATGTTTCACATGCAACAAGTTATACATGGCAGGATAGAAATTTTCCCCAGCTTTTACTTATTTGTTATCCCATATAAACGGCACTAAAGCAGTATTCTTATGATCAAACACAGCTTATTTCTTGATTGTAATGCGATGGAATCACTCTAGGCAATTCTCTATCTTCTTTTGCATCTTTGATTGCCTTAAATGGTAGATTCTATTTATTTAACCTATCAAAATCTTTCTGTCACCCTCCCCTGCGCCCAGGTAAAAGAGTGAAAAAGAATGATCAGAATTGCTCATATATCTTGAGCAGTTTGTATAATTTAGGAAATGTTGGAGGTACCTGAACAATGGGGAAAGTTTATGATTGCTGTGGAAGTTCCTGTCATCAGAGCCTCATAAATCTTCCTTTTTGGTAAAAAGACATCGAAAAAACAAATTAGAATAAAGACATTAAAAAAGTTGATCAGTAGTTTCCCCTTATGGCAAACACACAATTGTGCATCTTAAAGAAGGGTCAGATTTGTGATTTGTCTTGCTGTCACAACCATATCTTGTTGCGCTAGATATTCTCTTCAATGTGTTGATCACGATATCCTTGTTCACTCATCCAACCTTATTAGCTCTCTAACCCACTTCCGTAAATATCACATGTTTATCTAATAAATCAGGATCCATTTTGGGTCCTTTGAATAAAAAATAAACGTTTTAGTAGTTCTGACCTTCTTCACCCTTAGTTTGTGATGAAGTCACAATCTAGTTTTGTTAGTTTTACAGTTTTACTCCAGGTCCATTCTGCGAAAACCACCACCAGATAAATATAAGCAGATAGTTCAGCTGCTTATTATATTTGGGAAATTCTTCCAAGGTCCAAGGATGTGGACTAGGGTCAATAAAGTGGGTGCAAACCTTGTAGATCAGGGTCTCCTAATCCCATAGAGACAAAAAACACTTGTTATTTCGTTCCTTATGTTTAAGCCCTAGTGAGTAGTGATAAGAATCGGGTTTTACTTGAATAAACTAGAAAACAATGCGAAAGCAAAAATACAAAGATTAATGACAAGAAATTAGAGAATAAAATTCCCTAGTTCAAAAGTAGTCCTAAGAATCCTAATTGATCTTAGTGTTCAGAAATTAGCAGATTAGAGCTAATTTATGATACTGATAGAGTCAATTCAAGAACTTAGATCAATAATTACCTTCTTTAATTTACTAATAAGAGCCAAAGATATCAAGTTAATTACCTCTTAAAGATTTGTTCTTAAAAGGTTGTAATCCCCAATAGCCATACACAGGTGTAAAGTAGATAAACTCTCAATTAACAATAAAGTTGTCTACACAAAAATAATAAAATCTACCCCTATATATTGGGGAAAACTATCCAAATAGAATTGGATTAGAATCTACTTTTATGGAAATAATAACTAAAATCTAACCAGGAAACTTTTAGCTAGGAAAGCATATAAGAATTTTATAATTCTTCCCCAAAGAAATAAGGAAAAGTTTTCAATTTTGACCAGAACACGTGGGCCCTTCCCAAGCCACTTGTATGCGACTCTTTTCTCCCTTCTGGGTGAGTTTTTTAAGCTCATTCTTTTAGGCAGAAATTTCAGCCGCATGTGGGCCTCAATCATCTTCCTTTTGGGCTTGGACTTGAACCATAAAATATGCGTAGCACTTAGTCCATTCTTCTCATCATTCTTGGACTCGTTCTTGGGCTTTTCTTCCATGCTAACCATCTTCTTGATTTCCAATTGAAACCCTACAATCTTGACTTGCAACTCCTTAGCTCGAGACCTTGACGATTGTGCTATTAGGGCTTCTACAACATCATCCTGGTGCTCAGAGTAATCAGGTATGTGCAGGGGGGAAGGTAGTAGGAGCCCAGTGAGGTGCCTGTAAGCTGGCATGAATACAATAGTTGGCCAAAAGAATTGTATTTATGAATTTTCTATATTCCTTGATATGCTTGGGATGTCTTGGTGCATCACCGCATCTTCTTTGATTTATTTATTTATTTTTCTAAATGCTTCTATTATCACATTTACTACAATTTGACTTGTATGGTTGTTGGGACTTTCTTTGTGGTGATTTCATATGTTAAGCTTTTTGTATGACCTTACAGCTCTTAACATGGTTTCTTAAACCAGAAGAATTCTCATCTAGTCAAAATATCCTTGAAAATATCTGATTGCAGATCGATGAAGAGATTCTTCAAGAGGTGGTTAAGATGGGATTTGACAGGAACAACCTTACTGAGTCTCTTCGCAATAGAGTTCAAAATGAGGTAAATTTTCGTTATCAGCTATCTATTTTTTCCTTGATTGCCCTTTTCCCTCAATTTTAGTTGTATTTCAGGGCACTGTTGCATACTATCTGCTCCTGGACAATCGCCATCGTGTTTCCACTGGCTATCTTGGAGCTGAATTTCAGGAGTCCATGGTGCGTCTTTGCTTGTTTTTATTGAATAAAGCTGCAGTTTCTTTCCATCTGCTTTCGTGAGAAGGAGCCAATTAGTTTGCCAATATTTAATGAGTTTCTTGTCCATAAATATGTTACATCTTTATGACAGTCACTGAGTTCATCAACATTAAGCTTGCGTATGTAGTTGTGGTTGATTTTTTTGCTGTTATATGTGTTTAATTGGATGTATAAAAATGCCCTTGCAGGAATATGGTTACAACCGGATCAATTCTAATGAAACCGCTGCTTCCCCTGTTGGTCAACGTTTCCCAGGAATAATGGATTATCAGCAAGCTGGTGCAAGACAGTTCCCCATTGAAAGAAAATGGGCTCTTGGCCTCCAGGTTGGTTTGCTGCCTCATGCAAATAACTAACTTTGCTCTCTCTTATATTTTTTGTTTACTAATCATTGGAGTCATATGACCCTGCTCCTCTACCTTCTCTTACCCCCCTATATTGAAGCCCTGGGGGCTGGATATTCATGTTAACATGTGACTGGAGGGAAGGGCCAAGTATGAGACCTTTTTTTTATTTATTATGGAAATTGAAGTACTAATAAGCTTTGAAAACTTCCGTGATCCTATTTTATATTCAATCTGATTAACTTTGAAAACATCTTGCCAATTCCATCTATAATAAGTATAGGCTCATGCATGTACAACCTTTGTTAATTTGATGGGTTCTCTTGAGAAATTTTCTAGATAATTTGCTTCTAAATTCTTTTCAACAGTATGCTATACATAATAAACGCCTTTTTTTGCTACAGTCTCGAGCGCATCCACGTGAAATAATGACTGAAGTTTTGAAAGCTCTGCAAGAACTGAATGTATGTTGGAAAAAGATTGGTCAGTATAACATGAAATGTCGATGGGTTCCTAGCTTACCTGGTCATCATGAAGGCATGGGTGTTAATTCCATGCATGGGAATCAGTTCTTTGGAGATGATTCATCCATCATTGAGAATGATGGGGCCACAAAGTTAACAAATGTGGTCAAGTTTGAAGTTCAGGTATGAAAAATTTCATGGATCATACATCTAGTTTCTGTCTAACTTCTTCATACAGGAGTACATGAATGTTGCTTTGGCCTTAAGATAGAATTTAGAGGGCACTTGTATATCATGAAAATAAGAAAAGCTTTAGTAACACGGTCAATCTTAATGACATTAACAAAGAATTGGGTGAGAAAGTAGTCTGCACTAGCAGTAATGAAGTATGTTGCACATAATTGGTGGAAGTCTTACTTGTATCCCTGTATTCTTTCTAAGAAAGTAGCTCGGTTCTTTGTGCTTGCCTATGTGTTTTAGATGCAAATCTTTGGAAAATTACTTGTGACTAAATCTCACCATGTCGAATTTTATGATACTGTAAATCCAAGTTGCTGGTCTTTTTGTTAGATTTACCTCTATTATTAGAATTTGAGGGGGGGTTGTCACTGCCTCACTGGTGACTCAGAAAAGTGCTTTTTAGGTTGGTTTGAACATTTGAATGCATGTGAATTGGTCCTTGTATTATCTGAAGAGGACAAAGTCTTACTTCTTTGGTGATTTGATCACTTCTGCCCAAAACCTTGGTAGGCAAAGTAACCTGATATTTGTGTTGGTAAGAGGTAGTAAGTACCTGTTGGAATTAGCCGAGGTGCACACAAATTGGCCCGGATAGGAACACTATTGTTTGGATCTGCTGGTTTTCTGAGTCTTGCACAGCTTGTATGGTTCTGAAATTTTATTTGATGTTTGTGTTCCTTTTGGCGCAGCTTTACAAAACCAGGGAGGAGAAGTACTTGCTTGACCTTCAGAGACTTCAGGGTCCACAATTCCTCTTCCTGGATCTCTGTGCTGCTTTTCTTGCTCAGCTTCGAGTACTTTAAAGTCTCCGAAATAAGGAGCTAAGTTGGAAAAAGCCCATGCTTGTATATAATTGGTATACCAGCTCAGTTACTGCATTTTGTCTTGTTAACAAATTCCACCCTGCTTGGTCAGAGGTGCCTAGCAACTCTTTTTTTCTTTTGATTCGCTAGGAGATCTAGCTCACTCTCTTTTTTAACGTTTATGGAATTTCAGTTACCTACAGTATCTACTTACAGATTGAACTGCAAGATGAGCGCGATGTCTGTCTGTGACCCATTCCCTCTTCTCCCCTTATCGACGATCATTTGGAGTCCAACGAAGATTTTCTTGTGTCAAATTTGAAATGTTTGTCTGAATAAAAACAAGTCCCAAC</genome_strand>
        <mrna_strand>GGCACGAGGTGGAAGGAAAACATCAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATGGACGGAACAGCAGTGCAGGGCACCAGCAGTGTTGACTCATTTTTACGGAACTATAAACTCGGGAAAACACTTGGCATTGGATCGTTCGGCAAAGTTAAAATAGCTGAACATACGTTAACAGGGCACAAAGTTGCTGTCAAGATTCTTAATCGTCGAAAAATCAGGAATATGGACATGGAGGAGAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTAGAGAAATCAAAATATTGAGATTGTTCATGCATCCTCATATTATACGGCTTTATGAGGTCATAGAGACACCATCAGATATATATGTTGTGATGGAGTATGTGAAATCTGGCGAGTTATTTGATTACATTGTTGAGAAGGGCAGATTGCAGGAGGATGAAGCTCGTAACTTTTTTCAGCAG........................................................................................ATAATTTCTGGTGTGGAGTACTGCCATAGAAACATGGTGGTTCATAGAGACCTTAAGCCTGAAAACCTCCTTCTGGACTCCAAATGGAATGTGAAGATCGCAGATTTTGGTTTGAGCAATATCATGCGCGATGGTCATTTTCTGAAGACAAGTTGCGGAAGCCCAAACTATGCTGCCCCAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATATCAGGTAAATTGTATGCTGGCCCTGAGGTAGATGTATGGAGCTGTGGTGTTATTCTTTATGCTCTTCTCTGTGGCACCCTTCCGTTTGACGATGAAAACATACCCAATCTTTTTAAGAAAATAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAATATATACTCTGCCCAGCCATTTATCAGCTGGTGCGAGGGATTTGATTCCGAGGATGCTTATAGTCGACCCAATGAAGCGAATGACTATTCCTGAGATTCGCCTGCACCCTTGGTTCCAAGCTCATTTGCCACGCTATTTGGCCGTGCCTCCACCAGATACAACCCAACAAGCAAAGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGATGAAGAGATTCTTCAAGAGGTGGTTAAGATGGGATTTGACAGGAACAACCTTACTGAGTCTCTTCGCAATAGAGTTCAAAATGAG.......................................................................GGCACTGTTGCATACTATCTGCTCCTGGACAATCGCCATCGTGTTTCCACTGGCTATCTTGGAGCTGAATTTCAGGAGTCCATG...................................................................................................................................................................................................................................GAATATGGTTACAACCGGATCAATTCTAATGAAACCGCTGCTTCCCCTGTTGGTCAACGTTTCCCAGGAATAATGGATTATCAGCAAGCTGGTGCAAGACAGTTCCCCATTGAAAGAAAATGGGCTCTTGGCCTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGAGCGCATCCACGTGAAATAATGACTGAAGTTTTGAAAGCTCTGCAAGAACTGAATGTATGTTGGAAAAAGATTGGTCAGTATAACATGAAATGTCGATGGGTTCCTAGCTTACCTGGTCATCATGAAGGCATGGGTGTTAATTCCATGCATGGGAATCAGTTCTTTGGAGATGATTCATCCATCATTGAGAATGATGGGGCCACAAAGTTAACAAATGTGGTCAAGTTTGAAGTTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTACAAAACCAGGGAGGAGAAGTACTTGCTTGACCTTCAGAGACTTCAGGGTCCACAATTCCTCTTCCTGGATCTCTGTGCTGCTTTTCTTGCTCAGCTTCGAGTACTTTAAAGTCTCCGAAATAAGGAGCTAAGTTGGAAAAAGCCCATGCTTGTATATAATTGGTATACCAGCTCAGTTACTGCATTTTGTCTTGTTAACAAATTCCACCCTGCTTGGTCAGAGGTGCCTAGCAACTCTTTTTTTCTTTTGATTCGCTAGGAGATCTAGCTCACTCTCTTTTTTAACGTTTATGGAATTTCAGTTACCTACAGTATCTACTTACAGATTGAACTGCAAGATGAGCGCGATGTCTGTCTGTGACCCATTCCCTCTTCTCCCCTTATCGACGATCATTTGGAGTCCAACGAAGATTTTCTTGTGTCAAATTTGAAATGTTTGTCTGAATAAAAACAAGTCCCAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E343856" ref_strand="+" ref_description="SGN-E343856 [cTOF-12-B17]">
      <seq>gggctcttggcctccagtctcgagcgcatccacgtgaaataatgacctgaagttttgaaagctctgcaagaactgaatgtatgttggaaaaagcttggtcagtataacatgaaatgtcgatgggttcctagcttacctggtcatcatgaaggcatgggtgttaattccatgcatgggaatcagttctttggagatgattcatccatcattgagaatgatggggccacaaagttaacaaatgtggtcaagtttgaagttcagctttacaaaaccagggaggagaagtacttgcttgaccttcagagacttcagggtccacaattcctcttcctggatctctgtgctgcttttcttgctcagcttcgagtactttaaagtctccgaaataaggagctaagttggaaaaagcccatgcttgtatataattggtataccagctcagttactgcattttgtcttgttaacaaattccaccctgcttggtcagaggtgcctagcaactctttttttcttttgattcgctaggagatctagctcactctcttttntaacgtttatggaatttcagttacctacagtatctacttacagattgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="12741" stop="10805"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12429" g_stop="12187" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="261" r_length="244" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12186" i_stop="11441" i_length="746">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11440" g_stop="11097" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="605" r_length="344" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E343856" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343856" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12429" e_stop="12187"/>
          <exon e_start="11440" e_stop="11097"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCGAGCGCATCCACGTGAAATAATGA-CTGAAGTTTTGAAAGCTCTGCAAGAACTGAATGTATGTTGGAAAAAGATTGGTCAGTATAACATGAAATGTCGATGGGTTCCTAGCTTACCTGGTCATCATGAAGGCATGGGTGTTAATTCCATGCATGGGAATCAGTTCTTTGGAGATGATTCATCCATCATTGAGAATGATGGGGCCACAAAGTTAACAAATGTGGTCAAGTTTGAAGTTCAGGTATGAAAAATTTCATGGATCATACATCTAGTTTCTGTCTAACTTCTTCATACAGGAGTACATGAATGTTGCTTTGGCCTTAAGATAGAATTTAGAGGGCACTTGTATATCATGAAAATAAGAAAAGCTTTAGTAACACGGTCAATCTTAATGACATTAACAAAGAATTGGGTGAGAAAGTAGTCTGCACTAGCAGTAATGAAGTATGTTGCACATAATTGGTGGAAGTCTTACTTGTATCCCTGTATTCTTTCTAAGAAAGTAGCTCGGTTCTTTGTGCTTGCCTATGTGTTTTAGATGCAAATCTTTGGAAAATTACTTGTGACTAAATCTCACCATGTCGAATTTTATGATACTGTAAATCCAAGTTGCTGGTCTTTTTGTTAGATTTACCTCTATTATTAGAATTTGAGGGGGGGTTGTCACTGCCTCACTGGTGACTCAGAAAAGTGCTTTTTAGGTTGGTTTGAACATTTGAATGCATGTGAATTGGTCCTTGTATTATCTGAAGAGGACAAAGTCTTACTTCTTTGGTGATTTGATCACTTCTGCCCAAAACCTTGGTAGGCAAAGTAACCTGATATTTGTGTTGGTAAGAGGTAGTAAGTACCTGTTGGAATTAGCCGAGGTGCACACAAATTGGCCCGGATAGGAACACTATTGTTTGGATCTGCTGGTTTTCTGAGTCTTGCACAGCTTGTATGGTTCTGAAATTTTATTTGATGTTTGTGTTCCTTTTGGCGCAGCTTTACAAAACCAGGGAGGAGAAGTACTTGCTTGACCTTCAGAGACTTCAGGGTCCACAATTCCTCTTCCTGGATCTCTGTGCTGCTTTTCTTGCTCAGCTTCGAGTACTTTAAAGTCTCCGAAATAAGGAGCTAAGTTGGAAAAAGCCCATGCTTGTATATAATTGGTATACCAGCTCAGTTACTGCATTTTGTCTTGTTAACAAATTCCACCCTGCTTGGTCAGAGGTGCCTAGCAACTCTTTTTTTCTTTTGATTCGCTAGGAGATCTAGCTCACTCTCTTTTTTAACGTTTATGGAATTTCAGTTACCTACAGTATCTACTTACAGATTGAACTGCAAGA</genome_strand>
        <mrna_strand>TCTCGAGCGCATCCACGTGAAATAATGACCTGAAGTTTTGAAAGCTCTGCAAGAACTGAATGTATGTTGGAAAAAGCTTGGTCAGTATAACATGAAATGTCGATGGGTTCCTAGCTTACCTGGTCATCATGAAGGCATGGGTGTTAATTCCATGCATGGGAATCAGTTCTTTGGAGATGATTCATCCATCATTGAGAATGATGGGGCCACAAAGTTAACAAATGTGGTCAAGTTTGAAGTTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTACAAAACCAGGGAGGAGAAGTACTTGCTTGACCTTCAGAGACTTCAGGGTCCACAATTCCTCTTCCTGGATCTCTGTGCTGCTTTTCTTGCTCAGCTTCGAGTACTTTAAAGTCTCCGAAATAAGGAGCTAAGTTGGAAAAAGCCCATGCTTGTATATAATTGGTATACCAGCTCAGTTACTGCATTTTGTCTTGTTAACAAATTCCACCCTGCTTGGTCAGAGGTGCCTAGCAACTCTTTTTTTCTTTTGATTCGCTAGGAGATCTAGCTCACTCTCTTTTNTAACGTTTATGGAATTTCAGTTACCTACAGTATCTACTTACAGATTGAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E697702" ref_strand="+" ref_description="SGN-E697702 [FA03DE06]">
      <seq>cttccgtttgacgatgaaaacatacccaatctttttaagaaaataaagggtggaatatatactctgcccagccatttatcagctggtgcgagggatttgattccgaggatgcttatagtcgacccaatgaagcgaatgactattcctgagattcgcctgcacccttggttccaagctcatttgccacgctatttggccgtgcctccaccagatacaacccaacaagcaaagaagatcgatgaagagattcttcaagaggtggttaagatgggatttgacaggaacaaccttactgagtctcttcgcaatagagttcaaaatgagggcactgttgcatactatctgctcctggacaatcgccatcgtgtttccactggctatcttggagctgaatttcaggagtccatggaatatggttacaaccggatcaattctaatgaaaccgctgcttcccctgttggtcaacgtttcccaggaataatggattatcagcaagctggtgcaagacagttccccattgaaagaaaatgggctcttggcctccagtctcgagcgcatccacgtgaaataatgactgaagttttgaaagctctgcaagaactgaatgtatgttggaaaaagattggtcagtataacatgaaatgtcgatgggttcctagcttacctggtcatcatgaaggcatgggtgttaattccatgcatgggaatcagttctttggagatgattcatccatcattgagaatgatggggccccaaagttaacaaatgtggtcaagtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="16822" stop="11895"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16522" g_stop="16475" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16474" i_stop="15881" i_length="594">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15880" g_stop="15695" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="234" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15694" i_stop="13462" i_length="2233">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13461" g_stop="13372" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="324" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13371" i_stop="13301" i_length="71">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13300" g_stop="13217" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="408" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13216" i_stop="12990" i_length="227">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="12989" g_stop="12852" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="546" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="12851" i_stop="12430" i_length="422">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="12429" g_stop="12195" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="547" r_stop="781" r_length="235" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E697702" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>781</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E697702" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16522" e_stop="16475"/>
          <exon e_start="15880" e_stop="15695"/>
          <exon e_start="13461" e_stop="13372"/>
          <exon e_start="13300" e_stop="13217"/>
          <exon e_start="12989" e_stop="12852"/>
          <exon e_start="12429" e_stop="12195"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCGTTTGACGATGAAAACATACCCAATCTTTTTAAGAAAATAAAGGTATATTTTAGTTTACTTGAAATCCAGCATGTTAATGTTGATCCTTCTATCAATTTTATCCTATATTGATTTAGCTGCCCCGTGGCTTGAAATTGTGTGTTCCCAAATCTGCGACCTGATTGTAGTCCGACCCCGTTTCATGTTGGCGTTCAATTTTATTTGGTGGATAAAGGACTACAACTTTTGGCCCCATATCCAAACTTTCATTATTGCATACATAATAAGTCGGATGTTGTGTGGGTAGCTCCACTTTTCGTTGATGAGACTTGAGTATGTTACTGATTTATCCCATTTTACTATGCTGGTCAACTCTTTGTTTTCCAGTTCTGCCCTTCCAAATGTATCATGTCCAGGAAAAAAACAAAGATTGTTTAGATCTGCTGGGACCCAATCTCACCCTTTTTGTTGTTTTGGGTAAGTGGACATGATGTGAAATGTCAAATGGAAAAGGAAAAATGAAAACGATTCTCCATTGGAATGAATTTATGCTCCCTGTCTGTTCCCCAAAAAAGGGAGAGATTAGTTGATACATTTATTGAATCCATTGGGGTTGATCGCAGACAATTGCTTAACTTTATATCAATTTGTCTTTAGGGTGGAATATATACTCTGCCCAGCCATTTATCAGCTGGTGCGAGGGATTTGATTCCGAGGATGCTTATAGTCGACCCAATGAAGCGAATGACTATTCCTGAGATTCGCCTGCACCCTTGGTTCCAAGCTCATTTGCCACGCTATTTGGCCGTGCCTCCACCAGATACAACCCAACAAGCAAAGAAGGTTAGATTGAATGTACATTTGACTATTAATGATTAGTGTTTTTCTGCCTTAATGTTTCACATGCAACAAGTTATACATGGCAGGATAGAAATTTTCCCCAGCTTTTACTTATTTGTTATCCCATATAAACGGCACTAAAGCAGTATTCTTATGATCAAACACAGCTTATTTCTTGATTGTAATGCGATGGAATCACTCTAGGCAATTCTCTATCTTCTTTTGCATCTTTGATTGCCTTAAATGGTAGATTCTATTTATTTAACCTATCAAAATCTTTCTGTCACCCTCCCCTGCGCCCAGGTAAAAGAGTGAAAAAGAATGATCAGAATTGCTCATATATCTTGAGCAGTTTGTATAATTTAGGAAATGTTGGAGGTACCTGAACAATGGGGAAAGTTTATGATTGCTGTGGAAGTTCCTGTCATCAGAGCCTCATAAATCTTCCTTTTTGGTAAAAAGACATCGAAAAAACAAATTAGAATAAAGACATTAAAAAAGTTGATCAGTAGTTTCCCCTTATGGCAAACACACAATTGTGCATCTTAAAGAAGGGTCAGATTTGTGATTTGTCTTGCTGTCACAACCATATCTTGTTGCGCTAGATATTCTCTTCAATGTGTTGATCACGATATCCTTGTTCACTCATCCAACCTTATTAGCTCTCTAACCCACTTCCGTAAATATCACATGTTTATCTAATAAATCAGGATCCATTTTGGGTCCTTTGAATAAAAAATAAACGTTTTAGTAGTTCTGACCTTCTTCACCCTTAGTTTGTGATGAAGTCACAATCTAGTTTTGTTAGTTTTACAGTTTTACTCCAGGTCCATTCTGCGAAAACCACCACCAGATAAATATAAGCAGATAGTTCAGCTGCTTATTATATTTGGGAAATTCTTCCAAGGTCCAAGGATGTGGACTAGGGTCAATAAAGTGGGTGCAAACCTTGTAGATCAGGGTCTCCTAATCCCATAGAGACAAAAAACACTTGTTATTTCGTTCCTTATGTTTAAGCCCTAGTGAGTAGTGATAAGAATCGGGTTTTACTTGAATAAACTAGAAAACAATGCGAAAGCAAAAATACAAAGATTAATGACAAGAAATTAGAGAATAAAATTCCCTAGTTCAAAAGTAGTCCTAAGAATCCTAATTGATCTTAGTGTTCAGAAATTAGCAGATTAGAGCTAATTTATGATACTGATAGAGTCAATTCAAGAACTTAGATCAATAATTACCTTCTTTAATTTACTAATAAGAGCCAAAGATATCAAGTTAATTACCTCTTAAAGATTTGTTCTTAAAAGGTTGTAATCCCCAATAGCCATACACAGGTGTAAAGTAGATAAACTCTCAATTAACAATAAAGTTGTCTACACAAAAATAATAAAATCTACCCCTATATATTGGGGAAAACTATCCAAATAGAATTGGATTAGAATCTACTTTTATGGAAATAATAACTAAAATCTAACCAGGAAACTTTTAGCTAGGAAAGCATATAAGAATTTTATAATTCTTCCCCAAAGAAATAAGGAAAAGTTTTCAATTTTGACCAGAACACGTGGGCCCTTCCCAAGCCACTTGTATGCGACTCTTTTCTCCCTTCTGGGTGAGTTTTTTAAGCTCATTCTTTTAGGCAGAAATTTCAGCCGCATGTGGGCCTCAATCATCTTCCTTTTGGGCTTGGACTTGAACCATAAAATATGCGTAGCACTTAGTCCATTCTTCTCATCATTCTTGGACTCGTTCTTGGGCTTTTCTTCCATGCTAACCATCTTCTTGATTTCCAATTGAAACCCTACAATCTTGACTTGCAACTCCTTAGCTCGAGACCTTGACGATTGTGCTATTAGGGCTTCTACAACATCATCCTGGTGCTCAGAGTAATCAGGTATGTGCAGGGGGGAAGGTAGTAGGAGCCCAGTGAGGTGCCTGTAAGCTGGCATGAATACAATAGTTGGCCAAAAGAATTGTATTTATGAATTTTCTATATTCCTTGATATGCTTGGGATGTCTTGGTGCATCACCGCATCTTCTTTGATTTATTTATTTATTTTTCTAAATGCTTCTATTATCACATTTACTACAATTTGACTTGTATGGTTGTTGGGACTTTCTTTGTGGTGATTTCATATGTTAAGCTTTTTGTATGACCTTACAGCTCTTAACATGGTTTCTTAAACCAGAAGAATTCTCATCTAGTCAAAATATCCTTGAAAATATCTGATTGCAGATCGATGAAGAGATTCTTCAAGAGGTGGTTAAGATGGGATTTGACAGGAACAACCTTACTGAGTCTCTTCGCAATAGAGTTCAAAATGAGGTAAATTTTCGTTATCAGCTATCTATTTTTTCCTTGATTGCCCTTTTCCCTCAATTTTAGTTGTATTTCAGGGCACTGTTGCATACTATCTGCTCCTGGACAATCGCCATCGTGTTTCCACTGGCTATCTTGGAGCTGAATTTCAGGAGTCCATGGTGCGTCTTTGCTTGTTTTTATTGAATAAAGCTGCAGTTTCTTTCCATCTGCTTTCGTGAGAAGGAGCCAATTAGTTTGCCAATATTTAATGAGTTTCTTGTCCATAAATATGTTACATCTTTATGACAGTCACTGAGTTCATCAACATTAAGCTTGCGTATGTAGTTGTGGTTGATTTTTTTGCTGTTATATGTGTTTAATTGGATGTATAAAAATGCCCTTGCAGGAATATGGTTACAACCGGATCAATTCTAATGAAACCGCTGCTTCCCCTGTTGGTCAACGTTTCCCAGGAATAATGGATTATCAGCAAGCTGGTGCAAGACAGTTCCCCATTGAAAGAAAATGGGCTCTTGGCCTCCAGGTTGGTTTGCTGCCTCATGCAAATAACTAACTTTGCTCTCTCTTATATTTTTTGTTTACTAATCATTGGAGTCATATGACCCTGCTCCTCTACCTTCTCTTACCCCCCTATATTGAAGCCCTGGGGGCTGGATATTCATGTTAACATGTGACTGGAGGGAAGGGCCAAGTATGAGACCTTTTTTTTATTTATTATGGAAATTGAAGTACTAATAAGCTTTGAAAACTTCCGTGATCCTATTTTATATTCAATCTGATTAACTTTGAAAACATCTTGCCAATTCCATCTATAATAAGTATAGGCTCATGCATGTACAACCTTTGTTAATTTGATGGGTTCTCTTGAGAAATTTTCTAGATAATTTGCTTCTAAATTCTTTTCAACAGTATGCTATACATAATAAACGCCTTTTTTTGCTACAGTCTCGAGCGCATCCACGTGAAATAATGACTGAAGTTTTGAAAGCTCTGCAAGAACTGAATGTATGTTGGAAAAAGATTGGTCAGTATAACATGAAATGTCGATGGGTTCCTAGCTTACCTGGTCATCATGAAGGCATGGGTGTTAATTCCATGCATGGGAATCAGTTCTTTGGAGATGATTCATCCATCATTGAGAATGATGGGGCCACAAAGTTAACAAATGTGGTCAAGTTTG</genome_strand>
        <mrna_strand>CTTCCGTTTGACGATGAAAACATACCCAATCTTTTTAAGAAAATAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAATATATACTCTGCCCAGCCATTTATCAGCTGGTGCGAGGGATTTGATTCCGAGGATGCTTATAGTCGACCCAATGAAGCGAATGACTATTCCTGAGATTCGCCTGCACCCTTGGTTCCAAGCTCATTTGCCACGCTATTTGGCCGTGCCTCCACCAGATACAACCCAACAAGCAAAGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGATGAAGAGATTCTTCAAGAGGTGGTTAAGATGGGATTTGACAGGAACAACCTTACTGAGTCTCTTCGCAATAGAGTTCAAAATGAG.......................................................................GGCACTGTTGCATACTATCTGCTCCTGGACAATCGCCATCGTGTTTCCACTGGCTATCTTGGAGCTGAATTTCAGGAGTCCATG...................................................................................................................................................................................................................................GAATATGGTTACAACCGGATCAATTCTAATGAAACCGCTGCTTCCCCTGTTGGTCAACGTTTCCCAGGAATAATGGATTATCAGCAAGCTGGTGCAAGACAGTTCCCCATTGAAAGAAAATGGGCTCTTGGCCTCCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCGAGCGCATCCACGTGAAATAATGACTGAAGTTTTGAAAGCTCTGCAAGAACTGAATGTATGTTGGAAAAAGATTGGTCAGTATAACATGAAATGTCGATGGGTTCCTAGCTTACCTGGTCATCATGAAGGCATGGGTGTTAATTCCATGCATGGGAATCAGTTCTTTGGAGATGATTCATCCATCATTGAGAATGATGGGGCCCCAAAGTTAACAAATGTGGTCAAGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E701694" ref_strand="+" ref_description="SGN-E701694 [FA16CG05]">
      <seq>aattttcatattttgttgttgaatttcttcaatctgcttcttggggtttagcttctgccaggaaaatggacggaacagcagtgcagggcaccagcagtgttgactcatttttacggaactataaactcgggaaaacacttggcattggatcgttcggcaaagttaaaatagctgaacatacgttaacagggcacaaagttgctgtcaagattcttaatcgtcgaaaaatcaggaatatggacatggaggagaaagtccgtagagaaatcaaaatattgagattgttcatgcatcctcatattatacggctttatgaggtcatagagacaccatcagatatatatgttgtgatggagtatgtgaaatctggcgagttatttgattacattgttgagaagggcagattgcaggaggatgaagctcgtaacttttttcagcagataatttctggtgtggagtactgccatagaaacatggtggttcatagagaccttaagcctgaaaacctccttctggactccaaatggaatgtgaagatcgcagattttggtttgagcaatatcatgcgcgatggtcattttctgaagacaagttgcggaagcccaaactatgctgccccagaggttatatcaggtaaattgtatgctggccctgaggtagatgtatggagctgtggtgttattctttatgctcttctctgtggcacccttccgtttgacgatgaaaacatacccaatctttttaagaaaataaagggtggaatatatactctgcccagccatttatcagctggtgcgagggatttgattccgaggatgcttatagtcgacccaatgaagcgaatgactattcctgagaatcgcctgcacccttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="22745" stop="15461"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22445" g_stop="22385" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="22384" i_stop="20932" i_length="1453">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20931" g_stop="20738" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="255" r_length="194" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20737" i_stop="20189" i_length="549">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="20188" g_stop="20004" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="440" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="20003" i_stop="19916" i_length="88">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19915" g_stop="19733" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="623" r_length="183" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19732" i_stop="16607" i_length="3126">
            <donor d_prob="0.906" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="16606" g_stop="16475" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="624" r_stop="755" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="16474" i_stop="15881" i_length="594">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="15880" g_stop="15761" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="756" r_stop="875" r_length="120" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E701694" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>875</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E701694" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22445" e_stop="22385"/>
          <exon e_start="20931" e_stop="20738"/>
          <exon e_start="20188" e_stop="20004"/>
          <exon e_start="19915" e_stop="19733"/>
          <exon e_start="16606" e_stop="16475"/>
          <exon e_start="15880" e_stop="15761"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTCATATTTTGTTGTTGAATTTCTTCAATCTGCTTCTTGGGGTTTAGCTTCTGCCAGGTGGGTTTGCATGTTTGATTTCGTTTTTATTGGTAAAAAATTTATTCTCTATCAATATTTATCAGATCTGTTCTTGCTAGGGTTTTTTTCAAGAATATGACCGGTTGGGGGGTTAGATAATTGGGTAATTTCAAGATTTGGTTTTGGGGTTATGGGATTTGATTGTTTTTCGGCATTTAGGGTTATAAACGGGGTGGGGTTGGGGATTAATTCGACATTTGACTATGGGGTTGTGAATTTCTTTATCAAGTTAGCTCCTTTTCATTTTTTTTAGGGTGTGGGTACTGTTTATTGAGAATTTCTCTGTCGATTTTTTGAGAATTTGAGTGATAAAACGTGCCAATTTTAGCATAGGTGGGGTGGGGGTGGGGTAATTGAAGCTTTGTGACAGGTAGTGAGATCATGATGCCTTAGGTTTGGCTCCTCATTAGCATTTGGGTCTGTGTTTAAAGTATATGTTGGTATTATTCTTACTAGTGTGTTAAAGAGGGTGTCTATCGATACCTGTTGGTGAATTGTAAATTTTGGAAATATATTCCAACTTATGGGCAAAAAGAAATTACTATAGGGAGATTACAATCCAATTATAGATAAGACATTACTGACGATTAGTTTTATTTGAAAAGACATTATTTATGTACCTTTTAGGCCTTCAAAATTCTTCCTCTTTCAGTTATCATGGAAAGAGAAAGGTATATATGTTGTTCTAAAAATGCAATCTTTGGCACCCCGAAGCACCGGCAAAGGTATATATGTTGTTCTAAAAATGATGGCTTACTATCGTTTGTCACTTGAGACAATTAAGCTCCCTACAGATACTAGTATATGCAACTTTGGTAGATGAGTTAGGCAGTTGTGCATTGTGCCTATATTGCTCGGATTCTTCAAAATCCTAGTCACACACGCAACGTAGGTGTGGGATCTGCACTGGATTTGGTTAATTTACCTTGGGAGTACTTTGACCACATTTATGACTGAAAACTTCTAGTTCAATAGCTTTAATTAATCAAAAAATATTCTTTATATGTCATAATCTACATTTATTGGCATATCTCAGCACCCGTACCCGTACTTGAATCCATACCCCAAATCCTAAAACTTATGTGATGATGAATCTAACTGTCAGATCCGCACCCGTATCAATTACCCGCACCCGAATCCGAGCAACTTAGCATTGTGCTTTCGGAGTATCTTCGCTTCCAAGGAAGAATCCATTTTGAAAATAATCTCAAATTTATTACTCACATCTAGCAATTAATTATGGTACTAGCTAGTAATTTGTTGGAGGTAGCCAGCGTATTCTTAACGCTGAAGAATATAACTTTACCTTTCTAAAACAAATCTAGCTATCAAATTTTTCTTTTTGAGTGTTATTACAGGCGGAGGTACCTTTTGGAGTGTTTTTTGTGCCTTTTCTAAATCTAATTTGCCTCTAATTTTCTTGTGTTGATAGGAAAATGGACGGAACAGCAGTGCAGGGCACCAGCAGTGTTGACTCATTTTTACGGAACTATAAACTCGGGAAAACACTTGGCATTGGATCGTTCGGCAAAGTTAAAATAGCTGAACATACGTTAACAGGGCACAAAGTTGCTGTCAAGATTCTTAATCGTCGAAAAATCAGGAATATGGACATGGAGGAGAAAGGTATAGAAGTTAGAGAGTGCAGTCACATTCTCCCTTACTATCCAAAGTATATGAACATCGTTTCTCCTTTTTACCCCTAATTTTTAAGGTAAAAAGGGTAAGAAGTGGTGAGGTTTGAAGAAGGACAAACTGAATCTTGCAAGATGAAGATTGATGTTTAACCTAATGTTTGGCCTGTTTGTTCCTTTTAATATTTGTTTTTTTCTGTTCTATCTGACCTGGAACCTATATAAATGGATGATTAGATTGTCAATTGATTTGAATGTGGTTGAATTTTTCTTCTACTTTAATTTAAACGATAATCTTTGATTCTTTTTCACTCAAAATTTGCATTGAACTCCATATATGAAATTTTTGTTCTCAAATCTCTAGGTGTTTGTGGTTTGATTAGACTAGTGCCCAGTAGGATATACCTTGATGGAGGATGATTTTTGTTCTGAATGATTGGACATTGCTTGCTCTTGGTTCTAGGCTACAATTGTATATTTTTTTTCCTGTTTATGGATGTCTGGACTGTGTTAAGAGTTTTATATTGCTGAAATTCTGCAGTCCGTAGAGAAATCAAAATATTGAGATTGTTCATGCATCCTCATATTATACGGCTTTATGAGGTCATAGAGACACCATCAGATATATATGTTGTGATGGAGTATGTGAAATCTGGCGAGTTATTTGATTACATTGTTGAGAAGGGCAGATTGCAGGAGGATGAAGCTCGTAACTTTTTTCAGCAGGTGGATGTGCCACTTCCTTGAATGAGTTTTTTCATGCTGTTTAACTTTTTTAAAGTAGTTATGGTATTCTAATTCTTCTAAAAAACAGATAATTTCTGGTGTGGAGTACTGCCATAGAAACATGGTGGTTCATAGAGACCTTAAGCCTGAAAACCTCCTTCTGGACTCCAAATGGAATGTGAAGATCGCAGATTTTGGTTTGAGCAATATCATGCGCGATGGTCATTTTCTGAAGACAAGTTGCGGAAGCCCAAACTATGCTGCCCCAGAGGTACTGAAGCTTCTGATTCGAGTTAACAGCAATTACTTTTTGTGGTTCTGCCTAACTGATTGAAAAAAGAGTTGTGATTCATCACAATACTTAGAATGTATGCTGCATTTTGACTTGTCAGTATTTTTTTACATGCTCAATACATAGTCTAACCCCCCTCCCCCACCCACCCAAAAATGCTGTGTACTCAAATCCCTTTTACACACCCCTTGATAATGGGAATCATTGGAGTGGGAAAATTTTCTTGAAATTGGTAATAACAATATAATTTAATGGCCAAGAGGAGGAGAAGAAACAATCCAAATGGTTCCCAGATTAGTTTCGTTTAAATAGATTTGTCTATTTCAAAGTGAGGAAGAAGAAGAAGAAGAATGTGGAAGAATAATATTTGATTAATTTTTGATCTTTTTACAATTTCTGAAGTATTTTTCTTTTTCTATATTGTGAAATGTTTTGGGTTGTGATTGGTGTGTGAAATACACTTATCAAAGGAAAGTGATGAAACATAAAAATGGTGTGTATTAGACATAGGGGTGTCATATTAGGCCCAAACCCATTTGGCCCGCACATGTTTTGAATGGTTTGGGCATGGGCTACATACAAATGAGTTACGTTTGGGTTCTACTCATTTTAACCCATGAAGGAAGCTAAGCCCAAACTCAACCCATCATTTTTCATTTTTTTTTGAAGACAAAGGAAACCGATAGTTGCTATCCTTTGGGTGTGCACATGGTAAGACCCCGCTTTTATGCAATAGCTCGCAAACCACACATGAGCGGTGATTCACACTAGGCAATCCGGTGCGACGAGCTCCACCCAGAAGGCAAACCTATTGCTTTTGTCGGTTTTGAACTTGAGACCCCCAAAATGGAAGTCCCGCCCAAACCATTTGGCCATCCCGAAGGGTATAATTTTTCAAACTTCAATGTCAATAATTAGAGTTAAACTCATGATTATCCAAGATAAATGTCAAGTTGTCATCATTTGGATTATCTTTATGACTTTTATTTTTTTTGACCTTTTAAGTCAATTAAATAAAAGAAGAATGTCACTATGTGGAGATTTTATGCAACATATAATTAATGATGATATTACTTTTTTAAATTTATTTAAGTTTTTTGACCTTTTCAATGGCTTAACAGGAAGTCCTATTTACTTTCATCATCTTTTTTTTGGGTTATATTTCCCTTTATTATTAGATGTTTGTTTTTGGTCAAGTCATATTAGAATAAATTTATTAATTCAAAGTCTATACAACTATAAAGATTAAAATGTCAGGAATAGATATATGTTTCATATTGAATTTAATGATAATCACCATCAATATTTTAAATGGCGGACTTATAATTTATATATTTATTTGCTGGGATATGAATGAGCATCTTTTTCCACTTTTTGTTAAAAAAATTAGTTTAAGGAGTTGCCTATTTAGAAGGTGTTTGGATTGGCTTAAAAGTTGGTCAAACCTACTTTTAAGTCAGTTTTAGACTTCAAAAAGTGTTTTGGCAAATATAAAAAATAACTTACAATTAGTCAAAAATGACTTAAAATAAATAAAGAAGTGTTTGACAAGGTTAAAAATGACTTAAATAAGTTAAAAATGACTTTAAATAAGTCAAAAATCAAAAGTAGGTCTCCCCCTACTTTTTATTTTTCGACTTAAAAATCATTTTATTTCAACTTTTTATTTTTGACTTAAAAACTACTTTTTTTTTATGCCAATCCAAAAGGCTCTTAGGCAATTCTATATTTCGGTACGGTCTTACCCTATAGGGTGATTTTGTTTTTGGTAAAAGAAAGAGAAATAATGTCTTTCTTTTACTCTTTAAAAAACATATTTTTTTTGTTGGACAAGTTTATCATTCAATTATTTTCTAATATTTAATAATTTAAAATCAACATTAAATCTTTACTAACTTAAACCATTTTAGATTTATTTTATTTCTTCTAACGAATATCAATTTGAACAGGAATCAATTATGATTTTTACGCCAACAAGGGTTGTGGTGAAACCAAGACCTCTAGGGTATGGAGTCGTCTTTGTTAGTGCTGTTAGGGAGCACTGTATCCCCAATGTGGGACTTTCGGGCACAAATCGGAGTTTAGTTGGGCTCCAATGTAGGGCACCAAATGGGAAACCAAAATAAATACATATGATTTTTACATATTAATATTAAATGCAAGATGCATAAAAGTTATATGCATTAATCATTCTCAAAAAATAAAAGTTATATGCATTAAATAGGATTTTGACCAATTATAGTTTTGTCCCAAATTAAAAGTCTACATATATTTTAAATGTATATCATCAATAGAATTGATGTCAGACACAAACAAATCATTTATTTAAATGCTCAATTCAAACTACAAACATCACCAAGGAAAAATTCCAAATATTTCTAAATTGTAACCATTTAGGACTAACTTTTTACTATAAGTATATAGGTATGGAGATCTGTTTGTGGATATTCGGTTGAGAATGTTTATTGATATCTTTAAAAGGAAAGAACAAAACTTGTATCAAGTTGGGCGGGCTGGGCTGTGGCGAGGGGCGAATGTAGGCCCAAATTATGTTGCGCGTGAACGCATGGTCTCTCTGCAAATTAGATATTTTTTGTACATATTCTTGAATTGATCTAATATTCTCTGATGACTCTCATACTCCAAAAAACTTGAATGGTGTATTTGGTTCAATGTTGAGTTTTGTACCCCAAGGTCTAGGGATCAATTCCTACTTACTACTCTCTTTTTTCTCTTTTTCTTTTAAAGTTGTGCACCCATGTTCTAGAAATCATAGATCCGCTCTGGCTATGACCCGTCATTTAGCTCATCTTGACCCAACTCATTTTAGCCAAGTAGGCTATGGGCATGGTTGAGCAAATGACCCATTTGTGGATTCAACCCATCTTAGCCCAAACAACCGATTTGCCACCCCTTAGGCATACTTTCTGGAAATGTTTGGTGTGTAAAGTTATTCCCATGGTTAAAGCGGCATATAAAATGGATTTGGTTACAACCTTGGGCTGTAAACTATGTATTGAGTCTTTTTTCCCTTTAAAAAGTGCTTTTTATGCTCAATTGGTTTTTTTTTTTGATAACCATTAAATTCTTTCTCTCTCTCTGTAGGTTATATCAGGTAAATTGTATGCTGGCCCTGAGGTAGATGTATGGAGCTGTGGTGTTATTCTTTATGCTCTTCTCTGTGGCACCCTTCCGTTTGACGATGAAAACATACCCAATCTTTTTAAGAAAATAAAGGTATATTTTAGTTTACTTGAAATCCAGCATGTTAATGTTGATCCTTCTATCAATTTTATCCTATATTGATTTAGCTGCCCCGTGGCTTGAAATTGTGTGTTCCCAAATCTGCGACCTGATTGTAGTCCGACCCCGTTTCATGTTGGCGTTCAATTTTATTTGGTGGATAAAGGACTACAACTTTTGGCCCCATATCCAAACTTTCATTATTGCATACATAATAAGTCGGATGTTGTGTGGGTAGCTCCACTTTTCGTTGATGAGACTTGAGTATGTTACTGATTTATCCCATTTTACTATGCTGGTCAACTCTTTGTTTTCCAGTTCTGCCCTTCCAAATGTATCATGTCCAGGAAAAAAACAAAGATTGTTTAGATCTGCTGGGACCCAATCTCACCCTTTTTGTTGTTTTGGGTAAGTGGACATGATGTGAAATGTCAAATGGAAAAGGAAAAATGAAAACGATTCTCCATTGGAATGAATTTATGCTCCCTGTCTGTTCCCCAAAAAAGGGAGAGATTAGTTGATACATTTATTGAATCCATTGGGGTTGATCGCAGACAATTGCTTAACTTTATATCAATTTGTCTTTAGGGTGGAATATATACTCTGCCCAGCCATTTATCAGCTGGTGCGAGGGATTTGATTCCGAGGATGCTTATAGTCGACCCAATGAAGCGAATGACTATTCCTGAGATTCGCCTGCACCCTTGG</genome_strand>
        <mrna_strand>AATTTTCATATTTTGTTGTTGAATTTCTTCAATCTGCTTCTTGGGGTTTAGCTTCTGCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATGGACGGAACAGCAGTGCAGGGCACCAGCAGTGTTGACTCATTTTTACGGAACTATAAACTCGGGAAAACACTTGGCATTGGATCGTTCGGCAAAGTTAAAATAGCTGAACATACGTTAACAGGGCACAAAGTTGCTGTCAAGATTCTTAATCGTCGAAAAATCAGGAATATGGACATGGAGGAGAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTAGAGAAATCAAAATATTGAGATTGTTCATGCATCCTCATATTATACGGCTTTATGAGGTCATAGAGACACCATCAGATATATATGTTGTGATGGAGTATGTGAAATCTGGCGAGTTATTTGATTACATTGTTGAGAAGGGCAGATTGCAGGAGGATGAAGCTCGTAACTTTTTTCAGCAG........................................................................................ATAATTTCTGGTGTGGAGTACTGCCATAGAAACATGGTGGTTCATAGAGACCTTAAGCCTGAAAACCTCCTTCTGGACTCCAAATGGAATGTGAAGATCGCAGATTTTGGTTTGAGCAATATCATGCGCGATGGTCATTTTCTGAAGACAAGTTGCGGAAGCCCAAACTATGCTGCCCCAGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATATCAGGTAAATTGTATGCTGGCCCTGAGGTAGATGTATGGAGCTGTGGTGTTATTCTTTATGCTCTTCTCTGTGGCACCCTTCCGTTTGACGATGAAAACATACCCAATCTTTTTAAGAAAATAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAATATATACTCTGCCCAGCCATTTATCAGCTGGTGCGAGGGATTTGATTCCGAGGATGCTTATAGTCGACCCAATGAAGCGAATGACTATTCCTGAGAATCGCCTGCACCCTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E361870" ref_strand="+" ref_description="SGN-E361870 [cLPP-12-F20]">
      <seq>actctcagaaattacgtcaaattaccatcttatccttcttcttcttcctctcaattctctctgtttttctttttttttttcagaaaaaaatttccacaaaaacaaatccaaaagagcttggatccgacccgtttggacccatttgctctttctagtttcttctcctttctctctctctgtttcttgaaatttttttcattttttttttcacagagagggagacctacattcatttattattattgttaatggtgttttcttcattcaaaaaacaaaaaggtatacataatttcgtgagttccaatccaaatttacatctttgcatggtgtgcatcaccaattagcagacagatttgtgagctgagtagtaataatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="34484" stop="37066"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34784" g_stop="35067" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="279" r_length="279" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35068" i_stop="36669" i_length="1602">
            <donor d_prob="0.957" d_score="0.92"/>
            <acceptor a_prob="0.917" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36670" g_stop="36766" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="377" r_length="98" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E361870" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>381</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E361870" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34784" e_stop="35067"/>
          <exon e_start="36670" e_stop="36766"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTCTCAGAAATTACGTCAAATTACCATCTTATCCTTCTTCTTCTTCTTCCTCTCAATTCTCTCTGTTTTTC-TTTTTTTTTTCAGAAAAAAATTTCCACAGAAACAAATCCAAAAGAGCTTGGATCCGACCCGTTTGGACCCATTTGCTCTTTCTAGTTTCTTCTCCTTTCTCTCTCTCTGTTTCTTGAAATTTTTTTCA-TTTTTTTTTCACAGAGAGGGAGACCTACATTCATTTATTATTATTATTGTTAATGGTGTTCTCTTCATTCAAAAAAACAAAAAGGTATGAACTTTTTCATGTATATATATTGATGGTGGGTATCTACCAGAATTTACAACTGATGTCCCATTTTTTGTGTTGCGGGGTATGACTTGTTTGAGATCGAGACGTAGTTGGTGCTTTGTTATTAATTATTTACCTTAAAGTTGGGGGTTGGAATTAATTTTTTTTGAAATTTTGGTAACATATTCATCCCATGTATTTCTTAATTCTTGACCTATTGATTAGTAGCTTGTTGTATTGTGATTTTTTTTTTTGCTGTTTTCGTTCTTGATATTTTATAGCTGCATTTGAGTTTGAGAGTTTTTTTGAAAAACAACTTTTTCTGTATCACAAAATATTAATAAAGATTTGCGTACATTTTATACTTCTCGAGATGTATTGTTGTTGTTCTCATCATCATTCTTTATATTTTGTCTTTTTCCGCTTTTTAAAGCAATTGCTTTGTTAATTTTTTTTTCTTTTTTTTTCTTTTTATAGTTTCTAACAACTTTGGTGTTGTTATTCTTTTGTTTGTTTGTTTTGTGTTATGATGTTAATGTGGACCTATTTTTTGCTTCATTCTCTCTTATGCATAATCTGACAATTGTTTTGTCTGATTCAGTCTCTGAAAGTGAATACAAGGTCATCTTCAATTCCATCCTTTTTCATCATTAACAATTTTAATATACAGGACAAGGAAAATATAAAAATAAAAAATGAGAGAAAAAGCAGTTTATTACATTTATATCGAACACCTTTTTAGTTATGTCTCTAAATTATCTACTTTTTCTTATGTGTAGCACATGAAATTATTATAGTTTGTTTCATTAGTTTCTTTGCATTTAGCCATCTTTGTGTTCTTTTTTGCTTCTTTTTTTTGGTCAGTAATATTCTTGTATTACATCTGTTTTTTGAGGTTCACTGCTTTTAAAAGCCTGTTAAAAACAGCTTTTGTCTCATTTTTTTGAGTTTTATTCTAAAGCATATATAAGATTTTGAAAACTGCTAAATCAAGATTCATTTGTAGATTTTACTATTAGTTTCAGATGTTAAGTACTTCTTTAAGGTAAGCCTTTTGTACTCCAGTAATCGCAAATGCAGATAATGTATTGAATCAAATTTCAAACTCATTTACTAGTCATATCTTTGTAGTTCATGTGATTGTGACTTTAAGCCCCAATTGCATCATAGGAATTCGAAAAAAAGGGTTCTTTCGTATACTTATAGTAACTATTGTCACTTCTTTTTTGATTTTGATAGTTTCTGCGGTTCCAATTTCTGGGAGCATTATGTTGAGTCACTCCAAGAGTAGAATCAGCAGCTCACCTCACGTTTTAGGAACCGAGGAATCACACGTAGACGGACCTGAGCATTCTCCTGCTCTACGGTCTTGACGTAGACGCTGTTATGTTTTCTGTATTGTCGTTTTTCCTTTCAATTATTACTTTGATTTGCTTCTTCACTTGAGACGAGGGTCTTTCAAAAACAGTTTCTCTACCTCCATAGGAAAAGGTCTGCATACGCTACACCCTCCCAGACCCTACTTTGTGAGATTTCACTGAATATGTTATTATAAGGAATTGTATATTCAGAGATTTCAAGTTTCTCTTGTTCATGTTCCAGGTATACATAATTTCGTGAG-TCCAATCGAAATTTACATCTTTGCATGGTGTTCATCAGCAATTAGCAGACAGATTTGTGAGCTGAGTAGTAATAATGG</genome_strand>
        <mrna_strand>ACTCTCAGAAATTACGTCAAATTACCATCTTAT-C--CTTCTTCTTCTTCCTCTCAATTCTCTCTGTTTTTCTTTTTTTTTTTCAGAAAAAAATTTCCACAAAAACAAATCCAAAAGAGCTTGGATCCGACCCGTTTGGACCCATTTGCTCTTTCTAGTTTCTTCTCCTTTCTCTCTCTCTGTTTCTTGAAATTTTTTTCATTTTTTTTTTCACAGAGAGGGAGACCTACATTCA--T-TTATTATTATTGTTAATGGTGTTTTCTTCATTC-AAAAAACAAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATACATAATTTCGTGAGTTCCAATCCAAATTTACATCTTTGCATGGTGTGCATCACCAATTAGCAGACAGATTTGTGAGCTGAGTAGTAATAATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E363796" ref_strand="+" ref_description="SGN-E363796 [cLPP-3-J13]">
      <seq>agaaattacgtcaaattaccatcttatccttcttcttcttcctctcaattctctctgtttttctttttttttttcagaaaaaaatttccacaaaaacaaatccaaaagagcttggatcccacccgtttggacccatttgctctttctagtttcttctcctttctctctctctgtttcttgaaatttttttcattttttttttcccagagagggagacctaccttcatttattattattgttaatggtgttttcttcattcaaaaaacaaaaaggtatacataatttcgtgagttccaatcgaaatttacatctttgcatggtgtgcatcagcaattagcagacagatttgtgagctgagtagtaataatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="34515" stop="37066"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34790" g_stop="35067" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="0.942"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35068" i_stop="36669" i_length="1602">
            <donor d_prob="0.957" d_score="0.92"/>
            <acceptor a_prob="0.917" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36670" g_stop="36766" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="371" r_length="98" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E363796" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>375</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E363796" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34790" e_stop="35067"/>
          <exon e_start="36670" e_stop="36766"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAATTACGTCAAATTACCATCTTATCCTTCTTCTTCTTCTTCCTCTCAATTCTCTCTGTTTTTC-TTTTTTTTTTCAGAAAAAAATTTCCACAGAAACAAATCCAAAAGAGCTTGGATCCGACCCGTTTGGACCCATTTGCTCTTTCTAGTTTCTTCTCCTTTCTCTCTCTCTGTTTCTTGAAATTTTTTTCA-TTTTTTTTTCACAGAGAGGGAGACCTACATTCATTTATTATTATTATTGTTAATGGTGTTCTCTTCATTCAAAAAAACAAAAAGGTATGAACTTTTTCATGTATATATATTGATGGTGGGTATCTACCAGAATTTACAACTGATGTCCCATTTTTTGTGTTGCGGGGTATGACTTGTTTGAGATCGAGACGTAGTTGGTGCTTTGTTATTAATTATTTACCTTAAAGTTGGGGGTTGGAATTAATTTTTTTTGAAATTTTGGTAACATATTCATCCCATGTATTTCTTAATTCTTGACCTATTGATTAGTAGCTTGTTGTATTGTGATTTTTTTTTTTGCTGTTTTCGTTCTTGATATTTTATAGCTGCATTTGAGTTTGAGAGTTTTTTTGAAAAACAACTTTTTCTGTATCACAAAATATTAATAAAGATTTGCGTACATTTTATACTTCTCGAGATGTATTGTTGTTGTTCTCATCATCATTCTTTATATTTTGTCTTTTTCCGCTTTTTAAAGCAATTGCTTTGTTAATTTTTTTTTCTTTTTTTTTCTTTTTATAGTTTCTAACAACTTTGGTGTTGTTATTCTTTTGTTTGTTTGTTTTGTGTTATGATGTTAATGTGGACCTATTTTTTGCTTCATTCTCTCTTATGCATAATCTGACAATTGTTTTGTCTGATTCAGTCTCTGAAAGTGAATACAAGGTCATCTTCAATTCCATCCTTTTTCATCATTAACAATTTTAATATACAGGACAAGGAAAATATAAAAATAAAAAATGAGAGAAAAAGCAGTTTATTACATTTATATCGAACACCTTTTTAGTTATGTCTCTAAATTATCTACTTTTTCTTATGTGTAGCACATGAAATTATTATAGTTTGTTTCATTAGTTTCTTTGCATTTAGCCATCTTTGTGTTCTTTTTTGCTTCTTTTTTTTGGTCAGTAATATTCTTGTATTACATCTGTTTTTTGAGGTTCACTGCTTTTAAAAGCCTGTTAAAAACAGCTTTTGTCTCATTTTTTTGAGTTTTATTCTAAAGCATATATAAGATTTTGAAAACTGCTAAATCAAGATTCATTTGTAGATTTTACTATTAGTTTCAGATGTTAAGTACTTCTTTAAGGTAAGCCTTTTGTACTCCAGTAATCGCAAATGCAGATAATGTATTGAATCAAATTTCAAACTCATTTACTAGTCATATCTTTGTAGTTCATGTGATTGTGACTTTAAGCCCCAATTGCATCATAGGAATTCGAAAAAAAGGGTTCTTTCGTATACTTATAGTAACTATTGTCACTTCTTTTTTGATTTTGATAGTTTCTGCGGTTCCAATTTCTGGGAGCATTATGTTGAGTCACTCCAAGAGTAGAATCAGCAGCTCACCTCACGTTTTAGGAACCGAGGAATCACACGTAGACGGACCTGAGCATTCTCCTGCTCTACGGTCTTGACGTAGACGCTGTTATGTTTTCTGTATTGTCGTTTTTCCTTTCAATTATTACTTTGATTTGCTTCTTCACTTGAGACGAGGGTCTTTCAAAAACAGTTTCTCTACCTCCATAGGAAAAGGTCTGCATACGCTACACCCTCCCAGACCCTACTTTGTGAGATTTCACTGAATATGTTATTATAAGGAATTGTATATTCAGAGATTTCAAGTTTCTCTTGTTCATGTTCCAGGTATACATAATTTCGTGAG-TCCAATCGAAATTTACATCTTTGCATGGTGTTCATCAGCAATTAGCAGACAGATTTGTGAGCTGAGTAGTAATAATGG</genome_strand>
        <mrna_strand>AGAAATTACGTCAAATTACCATCTTAT-C--CTTCTTCTTCTTCCTCTCAATTCTCTCTGTTTTTCTTTTTTTTTTTCAGAAAAAAATTTCCACAAAAACAAATCCAAAAGAGCTTGGATCCCACCCGTTTGGACCCATTTGCTCTTTCTAGTTTCTTCTCCTTTCTCTCTCTCTGTTTCTTGAAATTTTTTTCATTTTTTTTTTCCCAGAGAGGGAGACCTACCTTCA--T-TTATTATTATTGTTAATGGTGTTTTCTTCATTC-AAAAAACAAAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATACATAATTTCGTGAGTTCCAATCGAAATTTACATCTTTGCATGGTGTGCATCAGCAATTAGCAGACAGATTTGTGAGCTGAGTAGTAATAATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E329828" ref_strand="+" ref_description="SGN-E329828 [cTOD-3-H3]">
      <seq>tttaagctccgtggtgatagttatttcaaagataagaggaaagcccctgctacaaatgtgtcaccttatactccaattggggtagacttatttgtttgcccaagaaagatcaatcatatagcacaacacattgagcttccttctataaaaggagatggaagaataccacctttactaattattaacattcagctgccaacttatcctgctccgatgttcgttggtgatgctgatggagaaggcttgagccttgtagtatatttcaaacttactgaaacttttgaggaggacatctctccccagtttcaggacaccatcaagagattcatcgaggatgacatggaaaaggtgaaaggttttgcaaaagaatcaactgttcctttcagagagaggttgaagattatggttgggttggttaatccagatgagattgttacaagttcaactgaaaggaagcttttgaatgcttacaatgacaagcctgtgctttcccgccctcaacacaatttttatcagggcccgaattacctagaagttgatcttgacattcatcgcttcagctacatagcaagaaaggggctcgatgcttttagaaaacgtttacgacatggaatacttgattttggtctaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="38093" stop="39954"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38393" g_stop="38421" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="29" r_length="29" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="38422" i_stop="38525" i_length="104">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38526" g_stop="38688" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="192" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="38689" i_stop="38775" i_length="87">
            <donor d_prob="0.937" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="38776" g_stop="38904" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="321" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="38905" i_stop="39236" i_length="332">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="39237" g_stop="39431" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="516" r_length="195" r_score="0.995"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="39432" i_stop="39538" i_length="107">
            <donor d_prob="0.991" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="39539" g_stop="39654" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="632" r_length="116" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E329828" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>632</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E329828" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38393" e_stop="38421"/>
          <exon e_start="38526" e_stop="38688"/>
          <exon e_start="38776" e_stop="38904"/>
          <exon e_start="39237" e_stop="39431"/>
          <exon e_start="39539" e_stop="39654"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAAGCTCCGTGGTGATAGTTATTTCAAGTACGCTCTCAACCTTCATTTTTTTTACCAATCAATTACAGTTGTAGGACTTCTATAATGGATTTTAAACCTGTTTCTTTACAATTTTTCCGTTTAATCTGCAGAGATAAGAGGAAAGCCCCTGCTACAAATGTGTCACCTTATACTCCAATTGGGGTAGACTTATTTGTTTGCCCAAGAAAGATCAATCATATAGCACAACACATTGAGCTTCCTTCTATAAAAGGAGATGGAAGAATACCACCTTTACTAATTATTAACATTCAGGTATTAGAGCAGTCTCTCCCAACTAAACGAAGTAGATTTTATTTGACATAACATTCTATTCTAACCGATATGGTTCTTCTTTGACAGCTGCCAACTTATCCTGCTCCGATGTTCGTTGGTGATGCTGATGGAGAAGGCTTGAGCCTTGTAGTATATTTCAAACTTACTGAAACTTTTGAGGAGGACATCTCTCCCCAGTTTCAGGACACCATCAAGGTACTTATGTCAACTTTATGAAGCAAAATCAACGGATTTTCTACTCCTTTCGTTTTTCATTTTTCCCTTCCTCTTTACTTGTAATTTAAGGAAGGTATTAACGAGGGGAGAGGCAGAAAGTAGAGTATGCTAGTTCTGTGTTCCATTTTGGACAGTGGTTAGCTGAAAGGTTAGGCTAGGGAGGTCGTTAACTTCACCATCTTGCAATTTAAATGATTGACAATTACTTCCTTCATAGCTGGCGATAGAGTCCTTTGCTGATATGGTTATTCTGATCTGCCTTGCTTCCCGATTTATGTTTCCTTTATACGTGCTACTCGTTTAAATGATAGAGATTCATCGAGGATGACATGGAAAAGGTGAAAGGTTTTGCAAAAGAATCAACTGTTCCTTTCAGAGAGAGGTTGAAGATTATGGTTGGGTTGGTTAATCCAGATGAGATTGTTACAAGTTCAACTGAAAGGAAGCTTTTGAATGCTTACAATGAAAAGCCTGTGCTTTCCCGCCCTCAACACAATTTTTATCAGGTGGATCTTTGATACCCTGACTTTAGTTTGTTTGTCAGTTTATCAACAGTGTGGTTCTTTTTTAACACCACAAAATTCTCAATGTGCATGGTCTCTGCTTATTATAGGGCCCGAATTACCTAGAAGTTGATCTTGACATTCATCGCTTCAGCTACATAGCAAGAAAGGGGCTCGATGCTTTTAGAGAACGTTTACGACATGGAATACTTGATTTTGGTCTAAC</genome_strand>
        <mrna_strand>TTTAAGCTCCGTGGTGATAGTTATTTCAA........................................................................................................AGATAAGAGGAAAGCCCCTGCTACAAATGTGTCACCTTATACTCCAATTGGGGTAGACTTATTTGTTTGCCCAAGAAAGATCAATCATATAGCACAACACATTGAGCTTCCTTCTATAAAAGGAGATGGAAGAATACCACCTTTACTAATTATTAACATTCAG.......................................................................................CTGCCAACTTATCCTGCTCCGATGTTCGTTGGTGATGCTGATGGAGAAGGCTTGAGCCTTGTAGTATATTTCAAACTTACTGAAACTTTTGAGGAGGACATCTCTCCCCAGTTTCAGGACACCATCAAG............................................................................................................................................................................................................................................................................................................................................AGATTCATCGAGGATGACATGGAAAAGGTGAAAGGTTTTGCAAAAGAATCAACTGTTCCTTTCAGAGAGAGGTTGAAGATTATGGTTGGGTTGGTTAATCCAGATGAGATTGTTACAAGTTCAACTGAAAGGAAGCTTTTGAATGCTTACAATGACAAGCCTGTGCTTTCCCGCCCTCAACACAATTTTTATCAG...........................................................................................................GGCCCGAATTACCTAGAAGTTGATCTTGACATTCATCGCTTCAGCTACATAGCAAGAAAGGGGCTCGATGCTTTTAGAAAACGTTTACGACATGGAATACTTGATTTTGGTCTAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E728262" ref_strand="+" ref_description="SGN-E728262 [LA17BA04]">
      <seq>tccacttatccaatatatacacactgatcaatttctttttatagcaagaatctctctaaatctgcaattgcagtattatttggctaattaaggcaagacattcttaattcaatatggaagcttgctttgtcacttcaaagcccctctcagagaaactcttccctttgttaggatcaagagtttcttattctacaaggaggaggtcatttgttagtcaatttcatcagcccaaaaaagttggtaatcctttttcagtgacatgttgccaggcaagttcaccattgccatcaccttcacctcaagatgaagaaaggcctttcactgaaacagactggcgatcatttcgagcacgcttagtcgccggcgaacgagcttcccggtcagaagatcgctcctccgtcgtcaatcccgacaccgtcgacgatcttcctccgcctccggccgtcacaatcggcacgaaatgggcccacaccattcacgaaccggaaaaaggttgtatactcatcgctaccgaaaagctggatggcgttcacatatttgaacggactgtagttctgttgttgtcaatgggcccaataggcccaatgggcttaattttaaacaggccttcactcatgtccattaaggaaatgaaaccgtcggtacttgacatgtcggggacaatttgctaataggccattgttttttggtgggcctttagaagatgggcttttcttagtaagcccaaatgaagatgggcttggaaaaagtggtgtttttgatgaagtaatgagagggttgtactatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="40671" stop="42752"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40971" g_stop="41231" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="261" r_length="261" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41232" i_stop="41927" i_length="696">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41928" g_stop="42452" g_length="525"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="787" r_length="526" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E728262" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>786</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E728262" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40971" e_stop="41231"/>
          <exon e_start="41928" e_stop="42452"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCACTTAACCAATATATACACACTGATCAATTTCTTTTTATAGCAAGAATCTCTCTAAATCTGCAATTGCAGTACTATTTGGCTAATTAAGGCAAGACATTCTCTATTCAATATGGAAGCTTGCTTTGTCACTTCAAAGCCCCTCTCAGAGAAACTCTTCCCTTTGTTAGGATCAAGAGTTTCTTATTCTACAAGGAGGAGGTCATTTGTTAGTCAATTTCATCAGCCAAAAAAAGTTGGCAATCCTTTTTCAGTGACATGTAAGTGCCCTGTTTCTTGTTTCCTTACTTTTGTTTCTCAAAGGTATTTTCGTCGGAGGCTCGTATGAGTCAGTCCAGTAGTGATCAGGATCAAATCTCAATTACCTCCTAAGTTAAGTTAGTTGCACCGAATCTTCACTTTTGATGCCGCATCGTATCAGATTTTCCAAAATATGCTACTTTTGGAGAATCCAACACACATCCATTGACATTTTTAAGAGTGTGAGCAACTATTAATCTCATGATCACTAATGTAAAAGCGGAGTGAGGATTTTCATTAAGCGTATCAAAATATAAACCACACACCCGAAAAGCTAAAGTGTTTCAACATCTAATATAGTTAGTGTAGTTTCCTATCAAGGAGTTTCAATCGAACCCCTCGGTCCTATCTATCTCCGCCAATGGTATCTATCAACACGATTCAAAGTACGAGAGTCAAACCATCTAATTTTCATTAAGAACTTGATCCTAAAATGTTCAAGTTCTTAAAATAATAGAATTTACGTATTTAAGTAAAAGAACTACTAATCACAAATCCATAATTATTACGAATTTAAATGCTTATATATGAAACATTTTGAATCACATAAATTTTGGCACATACTGTAAAATGAAACAGATTTTCAGGTAATTTTCAAATTAAGCTATAAAAGATGATCAGATAAACATATATTAAGAAAATTTTGATACTTGTAGGTTGCCAGGCAAGTTCACCATTGCCATCACCTTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGATCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCCGCCTCCGGCCGTCACAATCGGCTCGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAACGGACTGTAGTTCTGTTGTTGTCAATGGGCCCAATAGGCCCAATGGGCTTAATTTTAAACAGGCCTTCACTCATGTCCATTAAGGAAATGAAACCGTCGGTACTTGACATGTCGGGGAC-ATTTGCTAATAGGCCATTGTTTTTTGGTGGGCCTTTAGAAGATGAGCTTTTCTTAGTAAGCCCAAATGAAGATGGGCTTGGAAAAAGTGGTGTTTTTGATGAAGTAATGAGAGGTTTGTACTATG</genome_strand>
        <mrna_strand>TCCACTTATCCAATATATACACACTGATCAATTTCTTTTTATAGCAAGAATCTCTCTAAATCTGCAATTGCAGTATTATTTGGCTAATTAAGGCAAGACATTCTTAATTCAATATGGAAGCTTGCTTTGTCACTTCAAAGCCCCTCTCAGAGAAACTCTTCCCTTTGTTAGGATCAAGAGTTTCTTATTCTACAAGGAGGAGGTCATTTGTTAGTCAATTTCATCAGCCCAAAAAAGTTGGTAATCCTTTTTCAGTGACAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCAGGCAAGTTCACCATTGCCATCACCTTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGATCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCCGCCTCCGGCCGTCACAATCGGCACGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAACGGACTGTAGTTCTGTTGTTGTCAATGGGCCCAATAGGCCCAATGGGCTTAATTTTAAACAGGCCTTCACTCATGTCCATTAAGGAAATGAAACCGTCGGTACTTGACATGTCGGGGACAATTTGCTAATAGGCCATTGTTTTTTGGTGGGCCTTTAGAAGATGGGCTTTTCTTAGTAAGCCCAAATGAAGATGGGCTTGGAAAAAGTGGTGTTTTTGATGAAGTAATGAGAGGGTTGTACTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E340304" ref_strand="+" ref_description="SGN-E340304 [cTOF-2-M19]">
      <seq>acttatccaatatatacacactgatcaatttctttttatagcaagaatctctctaaatctgcaattgcagtattatttggctaattaaggcaagacattcttaattcaatatggaagcttgctttgtcacttcaaagcccctctcagagaaactcttccctttgttaggatcaagagtttcttattctacaaggaggaggtcatttgttagtcaatttcatcagcccaaaaaagttggtaatcctttttcagtgacatgttgccaggcaagttcaccattgccatcaccttcacctcaagatgaagaaaggcctttcactgaaacagactggcgatcatttcgagcacgcttagtcgccggcgaacgagcttcccggtcagaagatcgctcctccgtcgtcaatcccgacaccgtcgacgatcttcctccgcctccggccgtcacaatcggcacgaaatgggcccacaccattcacgaaccggaaaaaggttgtatactcatcgctaccgaaaagctggatggcgttcacatatttgaacggactgtagttctgttgttgtcaatgggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="40674" stop="42538"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40974" g_stop="41231" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="258" r_length="258" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41232" i_stop="41927" i_length="696">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41928" g_stop="42238" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="569" r_length="311" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E340304" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E340304" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40974" e_stop="41231"/>
          <exon e_start="41928" e_stop="42238"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTAACCAATATATACACACTGATCAATTTCTTTTTATAGCAAGAATCTCTCTAAATCTGCAATTGCAGTACTATTTGGCTAATTAAGGCAAGACATTCTCTATTCAATATGGAAGCTTGCTTTGTCACTTCAAAGCCCCTCTCAGAGAAACTCTTCCCTTTGTTAGGATCAAGAGTTTCTTATTCTACAAGGAGGAGGTCATTTGTTAGTCAATTTCATCAGCCAAAAAAAGTTGGCAATCCTTTTTCAGTGACATGTAAGTGCCCTGTTTCTTGTTTCCTTACTTTTGTTTCTCAAAGGTATTTTCGTCGGAGGCTCGTATGAGTCAGTCCAGTAGTGATCAGGATCAAATCTCAATTACCTCCTAAGTTAAGTTAGTTGCACCGAATCTTCACTTTTGATGCCGCATCGTATCAGATTTTCCAAAATATGCTACTTTTGGAGAATCCAACACACATCCATTGACATTTTTAAGAGTGTGAGCAACTATTAATCTCATGATCACTAATGTAAAAGCGGAGTGAGGATTTTCATTAAGCGTATCAAAATATAAACCACACACCCGAAAAGCTAAAGTGTTTCAACATCTAATATAGTTAGTGTAGTTTCCTATCAAGGAGTTTCAATCGAACCCCTCGGTCCTATCTATCTCCGCCAATGGTATCTATCAACACGATTCAAAGTACGAGAGTCAAACCATCTAATTTTCATTAAGAACTTGATCCTAAAATGTTCAAGTTCTTAAAATAATAGAATTTACGTATTTAAGTAAAAGAACTACTAATCACAAATCCATAATTATTACGAATTTAAATGCTTATATATGAAACATTTTGAATCACATAAATTTTGGCACATACTGTAAAATGAAACAGATTTTCAGGTAATTTTCAAATTAAGCTATAAAAGATGATCAGATAAACATATATTAAGAAAATTTTGATACTTGTAGGTTGCCAGGCAAGTTCACCATTGCCATCACCTTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGATCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCCGCCTCCGGCCGTCACAATCGGCTCGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAACGGACTGTAGTTCTGTTGTTGTCAATGGGC</genome_strand>
        <mrna_strand>ACTTATCCAATATATACACACTGATCAATTTCTTTTTATAGCAAGAATCTCTCTAAATCTGCAATTGCAGTATTATTTGGCTAATTAAGGCAAGACATTCTTAATTCAATATGGAAGCTTGCTTTGTCACTTCAAAGCCCCTCTCAGAGAAACTCTTCCCTTTGTTAGGATCAAGAGTTTCTTATTCTACAAGGAGGAGGTCATTTGTTAGTCAATTTCATCAGCCCAAAAAAGTTGGTAATCCTTTTTCAGTGACAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCAGGCAAGTTCACCATTGCCATCACCTTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGATCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCCGCCTCCGGCCGTCACAATCGGCACGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAACGGACTGTAGTTCTGTTGTTGTCAATGGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E727518" ref_strand="+" ref_description="SGN-E727518 [LA14DG05]">
      <seq>acactgatcaatttctttttatagcaagaatctctctaaatctgcaattgcagtattatttggctaattaaggcaagacattcttaattcaatatggaagcttgctttgtcacttcaaagcccctctcagagaaactcttccctttgttaggatcaagagtttcttattctacaaggaggaggtcatttgttagtcaatttcatcagcccaaaaaagttggtaatcctttttcagtgacatgttgccaggcaagttcaccattgccatcaccttcacctcaagatgaagaaaggcctttcactgaaacagactggcgatcatttcgagcacgcttagtcgccggcgaacgagcttcccggtcagaagatcgctcctccgtcgtcaatcccgacaccgtcgacgatcttcctccgcctccggccgtcacaatcggcacgaaatgggcccacaccattcacgaaccggaaaaaggttgtatactcatcgctaccgaaaagctggatggcgttcacatatttgaacggactgtagttctgttgttgtcaatgggcccaataggcccaatgggcttaattttaaacaggccttcactcatgtccattaaggaaatgaaaccgtcggtacttgacatgtcggggacatttgctaataggccattgttttttggtgggcctttagaagatgggcttttcttagtaagcccaaatgaagatgggcttggaaaaagtggtgtttttgatgaagtaatgagaggtttgtactatggtacaaaagaaagtgtgggatgtgcttctgaaatggtgaaaagggatgttgttggggttgataattttaggttttttgatgggtattgtgcatgggaaaaagatcaattgaagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="40691" stop="42867"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40991" g_stop="41231" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="241" r_length="241" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41232" i_stop="41927" i_length="696">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41928" g_stop="42567" g_length="640"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="881" r_length="640" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E727518" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>881</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E727518" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40991" e_stop="41231"/>
          <exon e_start="41928" e_stop="42567"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACTGATCAATTTCTTTTTATAGCAAGAATCTCTCTAAATCTGCAATTGCAGTACTATTTGGCTAATTAAGGCAAGACATTCTCTATTCAATATGGAAGCTTGCTTTGTCACTTCAAAGCCCCTCTCAGAGAAACTCTTCCCTTTGTTAGGATCAAGAGTTTCTTATTCTACAAGGAGGAGGTCATTTGTTAGTCAATTTCATCAGCCAAAAAAAGTTGGCAATCCTTTTTCAGTGACATGTAAGTGCCCTGTTTCTTGTTTCCTTACTTTTGTTTCTCAAAGGTATTTTCGTCGGAGGCTCGTATGAGTCAGTCCAGTAGTGATCAGGATCAAATCTCAATTACCTCCTAAGTTAAGTTAGTTGCACCGAATCTTCACTTTTGATGCCGCATCGTATCAGATTTTCCAAAATATGCTACTTTTGGAGAATCCAACACACATCCATTGACATTTTTAAGAGTGTGAGCAACTATTAATCTCATGATCACTAATGTAAAAGCGGAGTGAGGATTTTCATTAAGCGTATCAAAATATAAACCACACACCCGAAAAGCTAAAGTGTTTCAACATCTAATATAGTTAGTGTAGTTTCCTATCAAGGAGTTTCAATCGAACCCCTCGGTCCTATCTATCTCCGCCAATGGTATCTATCAACACGATTCAAAGTACGAGAGTCAAACCATCTAATTTTCATTAAGAACTTGATCCTAAAATGTTCAAGTTCTTAAAATAATAGAATTTACGTATTTAAGTAAAAGAACTACTAATCACAAATCCATAATTATTACGAATTTAAATGCTTATATATGAAACATTTTGAATCACATAAATTTTGGCACATACTGTAAAATGAAACAGATTTTCAGGTAATTTTCAAATTAAGCTATAAAAGATGATCAGATAAACATATATTAAGAAAATTTTGATACTTGTAGGTTGCCAGGCAAGTTCACCATTGCCATCACCTTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGATCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCCGCCTCCGGCCGTCACAATCGGCTCGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAACGGACTGTAGTTCTGTTGTTGTCAATGGGCCCAATAGGCCCAATGGGCTTAATTTTAAACAGGCCTTCACTCATGTCCATTAAGGAAATGAAACCGTCGGTACTTGACATGTCGGGGACATTTGCTAATAGGCCATTGTTTTTTGGTGGGCCTTTAGAAGATGAGCTTTTCTTAGTAAGCCCAAATGAAGATGGGCTTGGAAAAAGTGGTGTTTTTGATGAAGTAATGAGAGGTTTGTACTATGGTACAAAAGAAAGTGTGGGATGTGCTTCTGAAATGGTGAAAAGGGATGTTGTTGGGGTTGATAATTTTAGGTTTTTTGATGGGTATTGTGCATGGGAAAAAGATCAATTGAAGGA</genome_strand>
        <mrna_strand>ACACTGATCAATTTCTTTTTATAGCAAGAATCTCTCTAAATCTGCAATTGCAGTATTATTTGGCTAATTAAGGCAAGACATTCTTAATTCAATATGGAAGCTTGCTTTGTCACTTCAAAGCCCCTCTCAGAGAAACTCTTCCCTTTGTTAGGATCAAGAGTTTCTTATTCTACAAGGAGGAGGTCATTTGTTAGTCAATTTCATCAGCCCAAAAAAGTTGGTAATCCTTTTTCAGTGACAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCAGGCAAGTTCACCATTGCCATCACCTTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGATCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCCGCCTCCGGCCGTCACAATCGGCACGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAACGGACTGTAGTTCTGTTGTTGTCAATGGGCCCAATAGGCCCAATGGGCTTAATTTTAAACAGGCCTTCACTCATGTCCATTAAGGAAATGAAACCGTCGGTACTTGACATGTCGGGGACATTTGCTAATAGGCCATTGTTTTTTGGTGGGCCTTTAGAAGATGGGCTTTTCTTAGTAAGCCCAAATGAAGATGGGCTTGGAAAAAGTGGTGTTTTTGATGAAGTAATGAGAGGTTTGTACTATGGTACAAAAGAAAGTGTGGGATGTGCTTCTGAAATGGTGAAAAGGGATGTTGTTGGGGTTGATAATTTTAGGTTTTTTGATGGGTATTGTGCATGGGAAAAAGATCAATTGAAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E547948" ref_strand="+" ref_description="SGN-E547948 [TUS-56-I23]">
      <seq>ctctaaatctgcaattgcagtattatttggctaattaaggcaagacattcttaattcaatatggaagcttgctttgtcacttcaaagcccctctcagagaaactcttccctttgttaggatcaagagtttcttattctacaaggaggaggtcatttgttagtcaatttcatcagcccaaaaaagttggtaatcctttttcagtgacatgttgccaggcaagttcaccattgccatcaccttcacctcaagatgaagaaaggcctttcactgaaacagactggcgatcatttcgagcacgcttagtcgccggcgaacgagcttcccggtcagaagatcgctcctccgtcgtcaatcccgacaccgtcgacgatcttcctccgcctccggccgtcacaatcggcacgaaatgggcccacaccattcacgaaccggaaaaaggttgtatactcatcgctaccgaaaagctggatggcgttcacatatttgaacggactgtagttctgttgttgtcaatgggcccaataggcccaatgggcttaattttaaacaggccttcactcatgtccattaaggaaatgaaaccgtcggtacttgacatgtcggggacatttgctaataggccattgttttttggtgggcctttagaagatgggcttttcttagtaagcccaaatgaagatgggcttggaaaaagtggtgtttttgatgaagtattgagaggtttgtactatggtacaaaagaaagtgtgggatgtgcttctgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="40724" stop="42784"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41024" g_stop="41231" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="208" r_length="208" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41232" i_stop="41927" i_length="696">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41928" g_stop="42484" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="765" r_length="557" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E547948" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>765</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E547948" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41024" e_stop="41231"/>
          <exon e_start="41928" e_stop="42484"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTAAATCTGCAATTGCAGTACTATTTGGCTAATTAAGGCAAGACATTCTCTATTCAATATGGAAGCTTGCTTTGTCACTTCAAAGCCCCTCTCAGAGAAACTCTTCCCTTTGTTAGGATCAAGAGTTTCTTATTCTACAAGGAGGAGGTCATTTGTTAGTCAATTTCATCAGCCAAAAAAAGTTGGCAATCCTTTTTCAGTGACATGTAAGTGCCCTGTTTCTTGTTTCCTTACTTTTGTTTCTCAAAGGTATTTTCGTCGGAGGCTCGTATGAGTCAGTCCAGTAGTGATCAGGATCAAATCTCAATTACCTCCTAAGTTAAGTTAGTTGCACCGAATCTTCACTTTTGATGCCGCATCGTATCAGATTTTCCAAAATATGCTACTTTTGGAGAATCCAACACACATCCATTGACATTTTTAAGAGTGTGAGCAACTATTAATCTCATGATCACTAATGTAAAAGCGGAGTGAGGATTTTCATTAAGCGTATCAAAATATAAACCACACACCCGAAAAGCTAAAGTGTTTCAACATCTAATATAGTTAGTGTAGTTTCCTATCAAGGAGTTTCAATCGAACCCCTCGGTCCTATCTATCTCCGCCAATGGTATCTATCAACACGATTCAAAGTACGAGAGTCAAACCATCTAATTTTCATTAAGAACTTGATCCTAAAATGTTCAAGTTCTTAAAATAATAGAATTTACGTATTTAAGTAAAAGAACTACTAATCACAAATCCATAATTATTACGAATTTAAATGCTTATATATGAAACATTTTGAATCACATAAATTTTGGCACATACTGTAAAATGAAACAGATTTTCAGGTAATTTTCAAATTAAGCTATAAAAGATGATCAGATAAACATATATTAAGAAAATTTTGATACTTGTAGGTTGCCAGGCAAGTTCACCATTGCCATCACCTTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGATCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCCGCCTCCGGCCGTCACAATCGGCTCGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAACGGACTGTAGTTCTGTTGTTGTCAATGGGCCCAATAGGCCCAATGGGCTTAATTTTAAACAGGCCTTCACTCATGTCCATTAAGGAAATGAAACCGTCGGTACTTGACATGTCGGGGACATTTGCTAATAGGCCATTGTTTTTTGGTGGGCCTTTAGAAGATGAGCTTTTCTTAGTAAGCCCAAATGAAGATGGGCTTGGAAAAAGTGGTGTTTTTGATGAAGTAATGAGAGGTTTGTACTATGGTACAAAAGAAAGTGTGGGATGTGCTTCTGAA</genome_strand>
        <mrna_strand>CTCTAAATCTGCAATTGCAGTATTATTTGGCTAATTAAGGCAAGACATTCTTAATTCAATATGGAAGCTTGCTTTGTCACTTCAAAGCCCCTCTCAGAGAAACTCTTCCCTTTGTTAGGATCAAGAGTTTCTTATTCTACAAGGAGGAGGTCATTTGTTAGTCAATTTCATCAGCCCAAAAAAGTTGGTAATCCTTTTTCAGTGACAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCAGGCAAGTTCACCATTGCCATCACCTTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGATCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCCGCCTCCGGCCGTCACAATCGGCACGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAACGGACTGTAGTTCTGTTGTTGTCAATGGGCCCAATAGGCCCAATGGGCTTAATTTTAAACAGGCCTTCACTCATGTCCATTAAGGAAATGAAACCGTCGGTACTTGACATGTCGGGGACATTTGCTAATAGGCCATTGTTTTTTGGTGGGCCTTTAGAAGATGGGCTTTTCTTAGTAAGCCCAAATGAAGATGGGCTTGGAAAAAGTGGTGTTTTTGATGAAGTATTGAGAGGTTTGTACTATGGTACAAAAGAAAGTGTGGGATGTGCTTCTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E267514" ref_strand="+" ref_description="SGN-E267514 [cLEI-8-A17]">
      <seq>tctaaatctgcaattgcagtattatttggctaattaaggcaagacattcttaattcaatatggaagcttgctttgtcacttcaaagcccctctcagagaaactcttccctttgttaggatcaagagtttcttattctacaaggaggaggtcatttgttagtcaatttcatcagcccaaaaaagttggtaatcctttttcagtgacatgttgccaggcaagttcaccattgccatcaccttcacctcaagatgaagaaaggcctttcactgaaacagactggcgatcatttcgagcacgcttagtcgccggcgaacgagcttcccggtcagaagatcgctcctccgtcgtcaatcccgacaccgtcgacgatcttcctccgcctncggccgtcacaatcggcacgaaatgggcccacaccattcacgaaccggaaaaaggttgtatactcatcgctaccgaaaagctggatggcgttcacatatttgaacggact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="40725" stop="42514"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41025" g_stop="41231" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="207" r_length="207" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41232" i_stop="41927" i_length="696">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41928" g_stop="42214" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="494" r_length="287" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E267514" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>494</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267514" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41025" e_stop="41231"/>
          <exon e_start="41928" e_stop="42214"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAAATCTGCAATTGCAGTACTATTTGGCTAATTAAGGCAAGACATTCTCTATTCAATATGGAAGCTTGCTTTGTCACTTCAAAGCCCCTCTCAGAGAAACTCTTCCCTTTGTTAGGATCAAGAGTTTCTTATTCTACAAGGAGGAGGTCATTTGTTAGTCAATTTCATCAGCCAAAAAAAGTTGGCAATCCTTTTTCAGTGACATGTAAGTGCCCTGTTTCTTGTTTCCTTACTTTTGTTTCTCAAAGGTATTTTCGTCGGAGGCTCGTATGAGTCAGTCCAGTAGTGATCAGGATCAAATCTCAATTACCTCCTAAGTTAAGTTAGTTGCACCGAATCTTCACTTTTGATGCCGCATCGTATCAGATTTTCCAAAATATGCTACTTTTGGAGAATCCAACACACATCCATTGACATTTTTAAGAGTGTGAGCAACTATTAATCTCATGATCACTAATGTAAAAGCGGAGTGAGGATTTTCATTAAGCGTATCAAAATATAAACCACACACCCGAAAAGCTAAAGTGTTTCAACATCTAATATAGTTAGTGTAGTTTCCTATCAAGGAGTTTCAATCGAACCCCTCGGTCCTATCTATCTCCGCCAATGGTATCTATCAACACGATTCAAAGTACGAGAGTCAAACCATCTAATTTTCATTAAGAACTTGATCCTAAAATGTTCAAGTTCTTAAAATAATAGAATTTACGTATTTAAGTAAAAGAACTACTAATCACAAATCCATAATTATTACGAATTTAAATGCTTATATATGAAACATTTTGAATCACATAAATTTTGGCACATACTGTAAAATGAAACAGATTTTCAGGTAATTTTCAAATTAAGCTATAAAAGATGATCAGATAAACATATATTAAGAAAATTTTGATACTTGTAGGTTGCCAGGCAAGTTCACCATTGCCATCACCTTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGATCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCCGCCTCCGGCCGTCACAATCGGCTCGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAACGGACT</genome_strand>
        <mrna_strand>TCTAAATCTGCAATTGCAGTATTATTTGGCTAATTAAGGCAAGACATTCTTAATTCAATATGGAAGCTTGCTTTGTCACTTCAAAGCCCCTCTCAGAGAAACTCTTCCCTTTGTTAGGATCAAGAGTTTCTTATTCTACAAGGAGGAGGTCATTTGTTAGTCAATTTCATCAGCCCAAAAAAGTTGGTAATCCTTTTTCAGTGACAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCAGGCAAGTTCACCATTGCCATCACCTTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGATCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCCGCCTNCGGCCGTCACAATCGGCACGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAACGGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E267134" ref_strand="+" ref_description="SGN-E267134 [cLEI-4-H22]">
      <seq>ctaaatctgcaattgcagtattatttggctaattaaggcaagacattcttaattcaatatggaagcttgctttgtcacttcaaagcccctctcagagaaactcttccctttgttaggatcaagagtttcttattctacaaggaggaggtcatttgttagtcaatttcatcagcccaaaaaagttggtaatcctttttcagtgacatgttgccaggcaagttcaccattgccatcaccttcacctcaagatgaagaaaggcctttcactgaaacagactggcgatcatttcgagcacgcttagtcgccggcgaacgagcttcccggtcagaagatcgctcctccgtcgtcaatcccgacaccgtcgacgatcttcctccgcctccggccgtcacaatcggcacgaaatgggcccacaccattcacgaaccggaaaaaggttgtatactcatcgctaccgaaaagctggatggcgttcacatatttgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="40726" stop="42508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41026" g_stop="41231" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="206" r_length="206" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41232" i_stop="41927" i_length="696">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41928" g_stop="42208" g_length="281"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="487" r_length="281" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E267134" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267134" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41026" e_stop="41231"/>
          <exon e_start="41928" e_stop="42208"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAATCTGCAATTGCAGTACTATTTGGCTAATTAAGGCAAGACATTCTCTATTCAATATGGAAGCTTGCTTTGTCACTTCAAAGCCCCTCTCAGAGAAACTCTTCCCTTTGTTAGGATCAAGAGTTTCTTATTCTACAAGGAGGAGGTCATTTGTTAGTCAATTTCATCAGCCAAAAAAAGTTGGCAATCCTTTTTCAGTGACATGTAAGTGCCCTGTTTCTTGTTTCCTTACTTTTGTTTCTCAAAGGTATTTTCGTCGGAGGCTCGTATGAGTCAGTCCAGTAGTGATCAGGATCAAATCTCAATTACCTCCTAAGTTAAGTTAGTTGCACCGAATCTTCACTTTTGATGCCGCATCGTATCAGATTTTCCAAAATATGCTACTTTTGGAGAATCCAACACACATCCATTGACATTTTTAAGAGTGTGAGCAACTATTAATCTCATGATCACTAATGTAAAAGCGGAGTGAGGATTTTCATTAAGCGTATCAAAATATAAACCACACACCCGAAAAGCTAAAGTGTTTCAACATCTAATATAGTTAGTGTAGTTTCCTATCAAGGAGTTTCAATCGAACCCCTCGGTCCTATCTATCTCCGCCAATGGTATCTATCAACACGATTCAAAGTACGAGAGTCAAACCATCTAATTTTCATTAAGAACTTGATCCTAAAATGTTCAAGTTCTTAAAATAATAGAATTTACGTATTTAAGTAAAAGAACTACTAATCACAAATCCATAATTATTACGAATTTAAATGCTTATATATGAAACATTTTGAATCACATAAATTTTGGCACATACTGTAAAATGAAACAGATTTTCAGGTAATTTTCAAATTAAGCTATAAAAGATGATCAGATAAACATATATTAAGAAAATTTTGATACTTGTAGGTTGCCAGGCAAGTTCACCATTGCCATCACCTTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGATCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCCGCCTCCGGCCGTCACAATCGGCTCGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAA</genome_strand>
        <mrna_strand>CTAAATCTGCAATTGCAGTATTATTTGGCTAATTAAGGCAAGACATTCTTAATTCAATATGGAAGCTTGCTTTGTCACTTCAAAGCCCCTCTCAGAGAAACTCTTCCCTTTGTTAGGATCAAGAGTTTCTTATTCTACAAGGAGGAGGTCATTTGTTAGTCAATTTCATCAGCCCAAAAAAGTTGGTAATCCTTTTTCAGTGACAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCAGGCAAGTTCACCATTGCCATCACCTTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGATCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCCGCCTCCGGCCGTCACAATCGGCACGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E730864" ref_strand="+" ref_description="SGN-E730864 [LA25BG05]">
      <seq>ctttaggaggaggtcatttgttagtcaatttcatcagcccaaaaaagttggtaatcctttttcagtgacatgttgccaggcaagttcaccattgccatcaccttcacctcaagatgaagaaaggcctttcactgaaacagactggcgatcatttcgagcacgcttagtcgccggcgaacgagcttcccggtcagaagatcgctcctccgtcgtcaatcccgacaccgtcgacgatcttcctccgcctccggccgtcacaatcggcacgaaatgggcccacaccattcacgaaccggaaaaaggttgtatactcatcgctaccgaaaagctggatggcgttcacatatttgaacggactgtagttctgttgttgtcaatgggcccaataggcccaatgggcttaattttaaacaggccttcactcatgtccattaaggaaatgaaaccgtcggtacttgacatgtcggggacatttgctaataggccattgttttttggtgggcctttagaagatgggcttttcttagtaagcccaaatgaagatgggcttggaaaaagtggtgtttttgatgaagtaatgagaggtttgtactatggtacaaaagaaagtgtgggatgtgcttctgaaatggtgaaaagggatgttgttggggttgataattttaggttttttgatgggtattgtgcatgggaaaaagatcaattgaaggatgagattagagctggttattggactgtagctgcttgtagcccaagtgtaattgggctttctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="40865" stop="42931"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41160" g_stop="41231" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="71" r_length="71" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41232" i_stop="41927" i_length="696">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41928" g_stop="42631" g_length="704"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="775" r_length="704" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E730864" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>776</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E730864" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41160" e_stop="41231"/>
          <exon e_start="41928" e_stop="42631"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACAAGGAGGAGGTCATTTGTTAGTCAATTTCATCAGCCAAAAAAAGTTGGCAATCCTTTTTCAGTGACATGTAAGTGCCCTGTTTCTTGTTTCCTTACTTTTGTTTCTCAAAGGTATTTTCGTCGGAGGCTCGTATGAGTCAGTCCAGTAGTGATCAGGATCAAATCTCAATTACCTCCTAAGTTAAGTTAGTTGCACCGAATCTTCACTTTTGATGCCGCATCGTATCAGATTTTCCAAAATATGCTACTTTTGGAGAATCCAACACACATCCATTGACATTTTTAAGAGTGTGAGCAACTATTAATCTCATGATCACTAATGTAAAAGCGGAGTGAGGATTTTCATTAAGCGTATCAAAATATAAACCACACACCCGAAAAGCTAAAGTGTTTCAACATCTAATATAGTTAGTGTAGTTTCCTATCAAGGAGTTTCAATCGAACCCCTCGGTCCTATCTATCTCCGCCAATGGTATCTATCAACACGATTCAAAGTACGAGAGTCAAACCATCTAATTTTCATTAAGAACTTGATCCTAAAATGTTCAAGTTCTTAAAATAATAGAATTTACGTATTTAAGTAAAAGAACTACTAATCACAAATCCATAATTATTACGAATTTAAATGCTTATATATGAAACATTTTGAATCACATAAATTTTGGCACATACTGTAAAATGAAACAGATTTTCAGGTAATTTTCAAATTAAGCTATAAAAGATGATCAGATAAACATATATTAAGAAAATTTTGATACTTGTAGGTTGCCAGGCAAGTTCACCATTGCCATCACCTTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGATCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCCGCCTCCGGCCGTCACAATCGGCTCGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAACGGACTGTAGTTCTGTTGTTGTCAATGGGCCCAATAGGCCCAATGGGCTTAATTTTAAACAGGCCTTCACTCATGTCCATTAAGGAAATGAAACCGTCGGTACTTGACATGTCGGGGACATTTGCTAATAGGCCATTGTTTTTTGGTGGGCCTTTAGAAGATGAGCTTTTCTTAGTAAGCCCAAATGAAGATGGGCTTGGAAAAAGTGGTGTTTTTGATGAAGTAATGAGAGGTTTGTACTATGGTACAAAAGAAAGTGTGGGATGTGCTTCTGAAATGGTGAAAAGGGATGTTGTTGGGGTTGATAATTTTAGGTTTTTTGATGGGTATTGTGCATGGGAAAAAGATCAATTGAAGGATGAGATTAGAGCTGGTTATTGGACTGTAGCTGCTTGTAGCCCAAGTGTAATTGGGCTTTCTGAT</genome_strand>
        <mrna_strand>CTTT-AGGAGGAGGTCATTTGTTAGTCAATTTCATCAGCCCAAAAAAGTTGGTAATCCTTTTTCAGTGACAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCCAGGCAAGTTCACCATTGCCATCACCTTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGATCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCCGCCTCCGGCCGTCACAATCGGCACGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAACGGACTGTAGTTCTGTTGTTGTCAATGGGCCCAATAGGCCCAATGGGCTTAATTTTAAACAGGCCTTCACTCATGTCCATTAAGGAAATGAAACCGTCGGTACTTGACATGTCGGGGACATTTGCTAATAGGCCATTGTTTTTTGGTGGGCCTTTAGAAGATGGGCTTTTCTTAGTAAGCCCAAATGAAGATGGGCTTGGAAAAAGTGGTGTTTTTGATGAAGTAATGAGAGGTTTGTACTATGGTACAAAAGAAAGTGTGGGATGTGCTTCTGAAATGGTGAAAAGGGATGTTGTTGGGGTTGATAATTTTAGGTTTTTTGATGGGTATTGTGCATGGGAAAAAGATCAATTGAAGGATGAGATTAGAGCTGGTTATTGGACTGTAGCTGCTTGTAGCCCAAGTGTAATTGGGCTTTCTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E344465" ref_strand="+" ref_description="SGN-E344465 [cTOF-14-O6]">
      <seq>tgggcccatttcgtgccgattgtgacggccggaggcggaggaagatcgtcgacggtgtcgggattgacgacggaggagcgatcttctgaccgggaagctcgttcgccggcgactaagcgtgctcgaaatgatcgccagtctgtttcagtgaaaggcctttcttcatcttgaggtgaaggtgatggcaatggtgaacttgcctggcaacctacaagtatcaaaattttcttaatatatgtttatctgatcatcttttatagcttaatttgaaaattacctgaaaatctgtttcattttacagtatgtgccaaaatttatgtgattcaaaatgtttcataaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="42435" stop="41493"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42135" g_stop="41785" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="351" r_length="351" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E344465" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>351</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344465" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42135" e_stop="41785"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGCCCATTTCGAGCCGATTGTGACGGCCGGAGGCGGAGGAAGATCGTCGACGGTGTCGGGATTGACGACGGAGGAGCGATCTTCTGACCGGGAAGCTCGTTCGCCGGCGACTAAGCGTGCTCGAAATGATCGCCAGTCTGTTTCAGTGAAAGGCCTTTCTTCATCTTGAGGTGAAGGTGATGGCAATGGTGAACTTGCCTGGCAACCTACAAGTATCAAAATTTTCTTAATATATGTTTATCTGATCATCTTTTATAGCTTAATTTGAAAATTACCTGAAAATCTGTTTCATTTTACAGTATGTGCCAAAATTTATGTGATTCAAAATGTTTCATATATAAGCATTTAA</genome_strand>
        <mrna_strand>TGGGCCCATTTCGTGCCGATTGTGACGGCCGGAGGCGGAGGAAGATCGTCGACGGTGTCGGGATTGACGACGGAGGAGCGATCTTCTGACCGGGAAGCTCGTTCGCCGGCGACTAAGCGTGCTCGAAATGATCGCCAGTCTGTTTCAGTGAAAGGCCTTTCTTCATCTTGAGGTGAAGGTGATGGCAATGGTGAACTTGCCTGGCAACCTACAAGTATCAAAATTTTCTTAATATATGTTTATCTGATCATCTTTTATAGCTTAATTTGAAAATTACCTGAAAATCTGTTTCATTTTACAGTATGTGCCAAAATTTATGTGATTCAAAATGTTTCATAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E287757" ref_strand="+" ref_description="SGN-E287757 [cLES-19-C5]">
      <seq>ttcacctcaagatgaagaaaggcctttcactgaaacagactggcgatcatttcgagcacgcttagtcgccggcgaacgagcttcccggtcagaagatcgctcctccgtcgtcaatcccgacaccgtcgacgatcttcctccgcctccggccgtcacaatcggcacgaaatgggcccacaccattcacgaaccggaaaaaggttgtatactcatcgctaccgaaaagctggatggcgttcacatatttgaacggact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="41659" stop="42514"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41959" g_stop="42214" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="256" r_length="256" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E287757" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>256</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E287757" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41959" e_stop="42214"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGATCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCCGCCTCCGGCCGTCACAATCGGCTCGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAACGGACT</genome_strand>
        <mrna_strand>TTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGATCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCCGCCTCCGGCCGTCACAATCGGCACGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAACGGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E537778" ref_strand="+" ref_description="SGN-E537778 [TUS-56-I23](-)">
      <seq>gaaaaaggttgtatactcatcgctaccgaaaagctggatggcgttcacatatttgaacggactgtagttctgttgttgtcaatgggcccaataggcccaatgggcttaattttaaacaggccttcactcatgtccattaaggaaatgaaaccgtcggtacttgacatgtcggggacatttgctaataggccattgttttttggtgggcctttagaagatgggcttttcttagtaagcccaaatgaagatgggcttggaaaaagtggtgtttttgatgaagtaatgagaggtttgtactatggtacaaaagaaagtgtgggatgtgcttctgaaatggtgaaaagggatgttgttggggttgataattttaggttttttgatgggtattgtgcatgggaaaaagatcaattgaaggatgagattagagctggttattggactgtagctgcttgtagcccaagtgtaattgggctttctgatgtgggaagtgttgggctttgggatgaagttcttgggcttatgactccaaagaaagtttggtgatgtgaatttttgagtttagatttgtgttgttgaaagtagaaggcccaaattattgtaaattattatgcattgttttttttaaccaattaaaaagataatgatattattgtctaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaactcgagggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="41852" stop="112716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42152" g_stop="42808" g_length="657"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="657" r_length="657" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42809" i_stop="43544" i_length="736">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.51"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43545" g_stop="43593" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="658" r_stop="705" r_length="48" r_score="0.510"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E537778" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E537778" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42152" e_stop="42808"/>
          <exon e_start="43545" e_stop="43593"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAACGGACTGTAGTTCTGTTGTTGTCAATGGGCCCAATAGGCCCAATGGGCTTAATTTTAAACAGGCCTTCACTCATGTCCATTAAGGAAATGAAACCGTCGGTACTTGACATGTCGGGGACATTTGCTAATAGGCCATTGTTTTTTGGTGGGCCTTTAGAAGATGAGCTTTTCTTAGTAAGCCCAAATGAAGATGGGCTTGGAAAAAGTGGTGTTTTTGATGAAGTAATGAGAGGTTTGTACTATGGTACAAAAGAAAGTGTGGGATGTGCTTCTGAAATGGTGAAAAGGGATGTTGTTGGGGTTGATAATTTTAGGTTTTTTGATGGGTATTGTGCATGGGAAAAAGATCAATTGAAGGATGAGATTAGAGCTGGTTATTGGACTGTAGCTGCTTGTAGCCCAAGTGTAATTGGGCTTTCTGATGTGGGAAGTGTTGGGCTTTGGGATGAAGTTCTTGGGCTTATGACTCCAAAGAAAGTTTGGTGATGTGAATTTTTGAGTTTAGATTTGTGTTGTTGAAAGTAGAAGGCCCAAATTATTGTAAATTATTATGCATTGTTTTTTTTAACCAATTAAAAAGATAATGATATTATTGTCTAAGTTGCACGGACTCTTCAATTTTGATGCTATACCTGCTTCTAATCGTATAATTCATGTATTAGCTATGCATATCTTAGTATTATATAGAATGTATAGATTGATTGAAAAAAATATATGGACTCTTCAATTTTGATGTTATACATGCTTCTAATCCTTTAATTCATGTATTATCTATACAAATTTTAGTATCTGATAATGCACCCTTAATTAATGAGCCCTTATAAGGGGGTTACTTGAAACACGAATTAAATTATTTTGAGATTATAATTTCTGAACATCAGGAAGATAAGATGGTACAAATACCATTTACCAAACGTAATATATATTTTATTCCAAATTTAATCTAGGGACTAAACGAGCCCTAACAACTTGACTAACTTTAGTACTAATCACTATTATTGAAGTAATTAACTCTATAAGCTAACTATAATCCCAATACATGGAAATTACCATATTAAGTAACAAAATCTCATATCCATGCCTAGTGTTATAGTACTCTTCACAAGAATGAGTCAAAGCATCACATCTTATTATTAATAGTACTAACATTAATTTTTTAAATAACAATTGGTTATATTTTTTTACTATATTTGAAATAATATTCATATTTGGAGGTGTTGCTATTTTAAAAGTGTGCTAAAAAACAAACTATATGTTGTTTTTCAAGACAGAAATACAACTTTTAAAATTAAATTTTGATTTTCACTGTCAAATGTTAAAACATGATTTATTGCAGAAGAGATAACTTAATTGCAGTGAAAAAGAAAATTAACAAACCACATCCC</genome_strand>
        <mrna_strand>GAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAACGGACTGTAGTTCTGTTGTTGTCAATGGGCCCAATAGGCCCAATGGGCTTAATTTTAAACAGGCCTTCACTCATGTCCATTAAGGAAATGAAACCGTCGGTACTTGACATGTCGGGGACATTTGCTAATAGGCCATTGTTTTTTGGTGGGCCTTTAGAAGATGGGCTTTTCTTAGTAAGCCCAAATGAAGATGGGCTTGGAAAAAGTGGTGTTTTTGATGAAGTAATGAGAGGTTTGTACTATGGTACAAAAGAAAGTGTGGGATGTGCTTCTGAAATGGTGAAAAGGGATGTTGTTGGGGTTGATAATTTTAGGTTTTTTGATGGGTATTGTGCATGGGAAAAAGATCAATTGAAGGATGAGATTAGAGCTGGTTATTGGACTGTAGCTGCTTGTAGCCCAAGTGTAATTGGGCTTTCTGATGTGGGAAGTGTTGGGCTTTGGGATGAAGTTCTTGGGCTTATGACTCCAAAGAAAGTTTGGTGATGTGAATTTTTGAGTTTAGATTTGTGTTGTTGAAAGTAGAAGGCCCAAATTATTGTAAATTATTATGCATTGTTTTTTTTAACCAATTAAAAAGATAATGATATTATTGTCTAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E545967" ref_strand="+" ref_description="SGN-E545967 [TUS-69-B11](-)">
      <seq>cagaataataccaatgttgagaatgtgaagaaggctgctgtcattcattacaatggtcaatcgaagccttggcttgaaataggctttgagcatctccggcctttttggaccaagtatgttaacagcaccaatgatttcattaggaattgtcacatattggagtagtgtacgtgttatgctgcaaggacaatacgcaggatagaaattcaaatggcataggctttgctgaatatttgctagggaacttaaagtcgaatcgagaaggagattctgatacttgacagaattggctgggatatatattcaggtatgggatgtgtgctactttgactcacttctataaagagtacctgcgatactagcatggatatgagattcgttcttcccatctgtaaaataaaaatttgttgcctagcttgttgatgtgacaaagtacacattatatctgcactttaggtggatgtagtatacatttggctctcactgttaccatcagtgatacaaaatcgggacatcccgagaagaaaagctaggatggtggcgctcacttttggctatccatttggctccattagaggttgagatgattcttttggcttcatttcattattttttttacctagtcagtttgatcgccatcgcccttgttattttcttgattaaatcaatatcttgttattttagacagtagattatagaaattttaagtcccttgttaatgaactgtgtaggttatacatattggtacttttttgtatgatcaagagtaattatagacaaactcagattattattatttttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="44748" stop="43357"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44448" g_stop="43647" g_length="802"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="811" r_length="811" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E545967" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>802</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E545967" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44448" e_stop="43647"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAATAATACCAATGTTGAGAATGTGAAGAAGGCTGCTGTCATTCATTACAATGGTCAATCGAAGCCTTGGCTTGAAATAGGATTTGAGCATCTCCGGCCTTTTTGGACCAAGTATGTTAACAGCACCAATGATTTCATTAAGAACTGTCACATATTGGAGTAGTGTACGTGTTATGCTGCAAGGACAATACGCAGGATAGAAATTCAAATGGCATAGGCTTTGCTGAATATTTGCTAGGGAACTTAAAATCGAATCGAGAAGGAGATTCTGATACTTGACAGAATTGGCTGGGATATATATTCAGGTATGGGATGTGTGCTACTTTGACTCACTTCTATGAAGAGTACCTGTGATACTAGCATGGATATGAGATTCGTTCTTCCCATTTGTAAAATAAAAATTCGTTGCCTAGCTTGTTGATGTGACAAAAGTACACATTATATCTGCACTTTAGATGGATGTAGTATACATTTGGCTCTCACTGTTACCATCAGTGATACAAAATCGGGACATAACGAGAAGAAAAGCTAGGAT-GTGGCGCTCACTTTTGGCTATACATTTGGCTCCATTAGAGGTTGAGATGATTCTTTTGGCTTCATTTCATTA-TTTTTTTACCTAGTCAGTTTGATCGCCATCGCCCTTGTTGTTTTC---------TCAATATCTTGTCATTTTAGACAGTAGATTATAGAAAATTTTAAGTCCCTTGTTAATGAACTGTGTAGGTTATACATATTGGTACTTTTTTGTATGATCAAGAGTAATTATAGACAAGCTCAGATTATTATTATTTTTTTTTATCAAA</genome_strand>
        <mrna_strand>CAGAATAATACCAATGTTGAGAATGTGAAGAAGGCTGCTGTCATTCATTACAATGGTCAATCGAAGCCTTGGCTTGAAATAGGCTTTGAGCATCTCCGGCCTTTTTGGACCAAGTATGTTAACAGCACCAATGATTTCATTAGGAATTGTCACATATTGGAGTAGTGTACGTGTTATGCTGCAAGGACAATACGCAGGATAGAAATTCAAATGGCATAGGCTTTGCTGAATATTTGCTAGGGAACTTAAAGTCGAATCGAGAAGGAGATTCTGATACTTGACAGAATTGGCTGGGATATATATTCAGGTATGGGATGTGTGCTACTTTGACTCACTTCTATAAAGAGTACCTGCGATACTAGCATGGATATGAGATTCGTTCTTCCCATCTGTAAAATAAAAATTTGTTGCCTAGCTTGTTGATGTGAC-AAAGTACACATTATATCTGCACTTTAGGTGGATGTAGTATACATTTGGCTCTCACTGTTACCATCAGTGATACAAAATCGGGACATCCCGAGAAGAAAAGCTAGGATGGTGGCGCTCACTTTTGGCTATCCATTTGGCTCCATTAGAGGTTGAGATGATTCTTTTGGCTTCATTTCATTATTTTTTTTACCTAGTCAGTTTGATCGCCATCGCCCTTGTTATTTTCTTGATTAAATCAATATCTTGTTATTTTAGACAGTAGATTATAG-AAATTTTAAGTCCCTTGTTAATGAACTGTGTAGGTTATACATATTGGTACTTTTTTGTATGATCAAGAGTAATTATAGACAAACTCAGATTATTATTATTTTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E687884" ref_strand="+" ref_description="SGN-E687884 [T3_tus_81_H18]">
      <seq>agcacaaaagaatttgctttgatgttgaagggaatgatggagagatctgaaagggagatcagggaatcaaaatttgctgagttaacgaataaacattttgcagcaagtgcagttccaaaaggcattcactgtctttcactgcgtttgactgatgaatactcgaccaatgctcatgcacgcaagcagttgccttcaccagaactactccctttgctttctgacaactcattgcaccattttgtactgtcaactgataacatcctagctgcagcagttgtcgtcagttctggcgtgcagtcagctctaaaacctgaaaagattgttttccatgtcatcactgataagaaaacatatgcaggcatgcattcatggtttgctctgaatcctgtctctcctgctattgtggaagttaaaggtattcatcagtttgattggctgacaagagaaaatgttcccgtactcgaagcagttgagagccattatgggattcggaaatactaccatggaaatcatattgcaggtgccaatctcagtgatattactccacgctcttttgcctcaaaattgcaggctagaagtccaaaatacatatccttgctaaatcatattcgcgtatatttaccagagcttttttccgaaccttgataaagtggttttctttaacgatgaatttgtaattcagcgggacctatcccccttgtgggacattgatctgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="47807" stop="45120"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47507" g_stop="47472" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47471" i_stop="46512" i_length="960">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46511" g_stop="45921" g_length="591"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="627" r_length="591" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45920" i_stop="45509" i_length="412">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45508" g_stop="45420" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="717" r_length="90" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E687884" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E687884" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47507" e_stop="47472"/>
          <exon e_start="46511" e_stop="45921"/>
          <exon e_start="45508" e_stop="45420"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCACAAAAGAATTTGCTTTGATGTTGAAGGGAATGGTATGTGCATATAATTAATCTCTCTATTTATTCGTGTACCATTTATTTCTAGGTGCATTAATTCTGCATTTTCATTTTCTTTATTGTTTCTCTTGCCTTTTGTTTTGGGCAGGGACAAATACAGAAAGTATGAATAATGGAATGAAATGCATGAGATTGGTTCATTAATAGCAAAGAACCCTTCTTCCCTTCATATATAGTCTGTTTTGTTCTAGGATACCAATACTTCTTCTTCTTCTCTGAATGTTAACTACTGTAGTAGATTTTGTTGCACGGTTCATTCTGATCTTTGCTATGCAATGAATTAGGTGCTGCAGTTATTTGTTTGACATAACGTAAGTTATCCAAAACCCAAGAAAAAAGTTCAGTCTAAGTTGCTTGGCCTTGGGTGTGGGTGTCTAATAAAGGTACGGATCCTTCATGATCTAAATTTTAAGATTAGGGGGTACGGATATGGGTGTGGGGATTCGGCTAAAATAATTCGAGTATCTAAAAATCGAGTTATATGTGTAAATTCTGAGACACTATGTGGAAAACTTACAAGGTATTCCAAGGGGCAAATATTGATCAAGAGGAGAACCACAGAACAAGATAAAAGGAAAATTTGTAACAGACATTTTTCTATATAAAAGCTATTCCATTTTTCTTCAATTTTACTTTAGTTTTAGTTTTGATTGCGTAAATCATTGTATCTGTCCCGTGTTTCTTCGTTGATTTCGCTAAAAGTACCCAAAATTGGTTGACCACACCCAGTGCAGATCCCACACCCACGTCGTGTCAACACGGGTACGTCATTTAAAGTGAAGAGCCCGAGCAACATTATCTACCCCATAGCTGTGGTTCTCTTAATGCCTATGCATGCATTCAGATTCTATTTATATGTTCAGATGATCTATATATAGCCTTATTAAACTTTCCTTTACACTCTTCTTTTCATATAATGAATTCATTATTTTGCAGATGGAGAGATCTGAAAGGGAGATCAGGGAATCAAAATTTGCTGAGTTAACGAATAAACATTTTGCAGCAAGTGCAGTTCCAAAAGGCATTCACTGTCTTTCACTGCGTTTGACTGATGAATACTCGACCAATGCTCATGCACGCAAGCAGTTGCCTTCACCAGAACTACTCCCTTTGCTTTCTGACAACTCATTGCACCATTTTGTACTGTCAACTGATAACATCCTAGCTGCAGCAGTTGTCGTCAGTTCTGGCGTGCAGTCAGCTCTAAAACCTGAAAAGATTGTTTTCCATGTCATCACTGATAAGAAAACATATGCAGGCATGCATTCATGGTTTGCTCTGAATCCTGTCTCTCCTGCTATTGTGGAAGTTAAAGGTATTCATCAGTTTGATTGGCTGACAAGAGAAAATGTTCCCGTACTCGAAGCAGTTGAGAGCCATTATGGGATTCGGAAATACTACCATGGAAATCATATTGCAGGTGCCAATCTCAGTGATATTACTCCACGCTCTTTTGCCTCAAAATTGCAGGCTAGAAGTCCAAAATACATATCCTTGCTAAATCATATTCGCGTATATTTACCAGAGGTAACACTTCGTCATATATCATAAATTGTCTTCTGTTGCTCTAACTTATAATTTGGAAGGATGAAATCGTCAGGTCAAAAAGTCTTGATAAGAGATGGATAACCTAGTAAGGACAAGGGTGGTTATTCAAGTTGCTAACGGTGCAGAAGTGGGAAGGACCGCTGTTGAGCTCCTGCATAGGGGTACGGAGGGGAGGGTGTTTTATACCATATCAAAACAAAAGGAAAACAAATGGAAAGGAAAAAGTGATAAATGAATACCACTAGTTTTAAATTTTTAATCATAACCTCTCAGGAATACAATTCCAGGATAAATCTAGAGACAATGATAATTCTTATTCCGCACTGTATAGATAGATATGTATGCTCTCTTGCCGGTACATGTTTGTGATTTTTTGTGTTGTATTTTGCAGC-TTTTTCCGAACCTTGATAAAGTGGTTTTCTTAGACGATGATATTGTAATTCAGCGTGACCTATCCCCCTTGTGGGACATTGATCTGAA</genome_strand>
        <mrna_strand>AGCACAAAAGAATTTGCTTTGATGTTGAAGGGAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGAGATCTGAAAGGGAGATCAGGGAATCAAAATTTGCTGAGTTAACGAATAAACATTTTGCAGCAAGTGCAGTTCCAAAAGGCATTCACTGTCTTTCACTGCGTTTGACTGATGAATACTCGACCAATGCTCATGCACGCAAGCAGTTGCCTTCACCAGAACTACTCCCTTTGCTTTCTGACAACTCATTGCACCATTTTGTACTGTCAACTGATAACATCCTAGCTGCAGCAGTTGTCGTCAGTTCTGGCGTGCAGTCAGCTCTAAAACCTGAAAAGATTGTTTTCCATGTCATCACTGATAAGAAAACATATGCAGGCATGCATTCATGGTTTGCTCTGAATCCTGTCTCTCCTGCTATTGTGGAAGTTAAAGGTATTCATCAGTTTGATTGGCTGACAAGAGAAAATGTTCCCGTACTCGAAGCAGTTGAGAGCCATTATGGGATTCGGAAATACTACCATGGAAATCATATTGCAGGTGCCAATCTCAGTGATATTACTCCACGCTCTTTTGCCTCAAAATTGCAGGCTAGAAGTCCAAAATACATATCCTTGCTAAATCATATTCGCGTATATTTACCAGAG............................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTTTCCGAACCTTGATAAAGTGGTTTTCTTTAACGATGAATTTGTAATTCAGCGGGACCTATCCCCCTTGTGGGACATTGATCTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E327574" ref_strand="+" ref_description="SGN-E327574 [cTOC-20-G16]">
      <seq>gcacaaaagaatttgctttgatgttgaagggaatgatggagagatctgaaagggagatcagggaatcaaaatttgctgagttaacgaataaacattttgcagcaagtgcagttccaaaaggcattcactgtctttcactgcgtttgactgatgaatactcgaccaatgctcatgcacgcaagcagttgccttcaccagaactactccctttgctttctgacaactcattgcaccattttgtactgtcaactgataacatcctagctgcagcagttgtcgtcagttctggcgtgcagtcagctctaaaacctgaaaagattgttttccatgtcatcactgataagaaaacatatgcaggcatgcattcatggtttgctctgaatcctgtctctcctgctattgtggaagttaaaggtattcatcagtttgattggctgacaagagaaaatgttcccgtactcgaagcagttgagagccattatgggattcggaaatactaccatggaaatcatattgcaggtgccaatctcagtgatattactccacgctcttttgcctcaaaattgcaggctagaagtccaaaatacatatccttgctnaatcatattcgcgtatatttaccagagctttttccgaaccttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="47806" stop="45619"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47506" g_stop="47472" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="47471" i_stop="46512" i_length="960">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46511" g_stop="45921" g_length="591"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="626" r_length="591" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E327574" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>626</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327574" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47506" e_stop="47472"/>
          <exon e_start="46511" e_stop="45921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCACAAAAGAATTTGCTTTGATGTTGAAGGGAATGGTATGTGCATATAATTAATCTCTCTATTTATTCGTGTACCATTTATTTCTAGGTGCATTAATTCTGCATTTTCATTTTCTTTATTGTTTCTCTTGCCTTTTGTTTTGGGCAGGGACAAATACAGAAAGTATGAATAATGGAATGAAATGCATGAGATTGGTTCATTAATAGCAAAGAACCCTTCTTCCCTTCATATATAGTCTGTTTTGTTCTAGGATACCAATACTTCTTCTTCTTCTCTGAATGTTAACTACTGTAGTAGATTTTGTTGCACGGTTCATTCTGATCTTTGCTATGCAATGAATTAGGTGCTGCAGTTATTTGTTTGACATAACGTAAGTTATCCAAAACCCAAGAAAAAAGTTCAGTCTAAGTTGCTTGGCCTTGGGTGTGGGTGTCTAATAAAGGTACGGATCCTTCATGATCTAAATTTTAAGATTAGGGGGTACGGATATGGGTGTGGGGATTCGGCTAAAATAATTCGAGTATCTAAAAATCGAGTTATATGTGTAAATTCTGAGACACTATGTGGAAAACTTACAAGGTATTCCAAGGGGCAAATATTGATCAAGAGGAGAACCACAGAACAAGATAAAAGGAAAATTTGTAACAGACATTTTTCTATATAAAAGCTATTCCATTTTTCTTCAATTTTACTTTAGTTTTAGTTTTGATTGCGTAAATCATTGTATCTGTCCCGTGTTTCTTCGTTGATTTCGCTAAAAGTACCCAAAATTGGTTGACCACACCCAGTGCAGATCCCACACCCACGTCGTGTCAACACGGGTACGTCATTTAAAGTGAAGAGCCCGAGCAACATTATCTACCCCATAGCTGTGGTTCTCTTAATGCCTATGCATGCATTCAGATTCTATTTATATGTTCAGATGATCTATATATAGCCTTATTAAACTTTCCTTTACACTCTTCTTTTCATATAATGAATTCATTATTTTGCAGATGGAGAGATCTGAAAGGGAGATCAGGGAATCAAAATTTGCTGAGTTAACGAATAAACATTTTGCAGCAAGTGCAGTTCCAAAAGGCATTCACTGTCTTTCACTGCGTTTGACTGATGAATACTCGACCAATGCTCATGCACGCAAGCAGTTGCCTTCACCAGAACTACTCCCTTTGCTTTCTGACAACTCATTGCACCATTTTGTACTGTCAACTGATAACATCCTAGCTGCAGCAGTTGTCGTCAGTTCTGGCGTGCAGTCAGCTCTAAAACCTGAAAAGATTGTTTTCCATGTCATCACTGATAAGAAAACATATGCAGGCATGCATTCATGGTTTGCTCTGAATCCTGTCTCTCCTGCTATTGTGGAAGTTAAAGGTATTCATCAGTTTGATTGGCTGACAAGAGAAAATGTTCCCGTACTCGAAGCAGTTGAGAGCCATTATGGGATTCGGAAATACTACCATGGAAATCATATTGCAGGTGCCAATCTCAGTGATATTACTCCACGCTCTTTTGCCTCAAAATTGCAGGCTAGAAGTCCAAAATACATATCCTTGCTAAATCATATTCGCGTATATTTACCAGAG</genome_strand>
        <mrna_strand>GCACAAAAGAATTTGCTTTGATGTTGAAGGGAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGAGATCTGAAAGGGAGATCAGGGAATCAAAATTTGCTGAGTTAACGAATAAACATTTTGCAGCAAGTGCAGTTCCAAAAGGCATTCACTGTCTTTCACTGCGTTTGACTGATGAATACTCGACCAATGCTCATGCACGCAAGCAGTTGCCTTCACCAGAACTACTCCCTTTGCTTTCTGACAACTCATTGCACCATTTTGTACTGTCAACTGATAACATCCTAGCTGCAGCAGTTGTCGTCAGTTCTGGCGTGCAGTCAGCTCTAAAACCTGAAAAGATTGTTTTCCATGTCATCACTGATAAGAAAACATATGCAGGCATGCATTCATGGTTTGCTCTGAATCCTGTCTCTCCTGCTATTGTGGAAGTTAAAGGTATTCATCAGTTTGATTGGCTGACAAGAGAAAATGTTCCCGTACTCGAAGCAGTTGAGAGCCATTATGGGATTCGGAAATACTACCATGGAAATCATATTGCAGGTGCCAATCTCAGTGATATTACTCCACGCTCTTTTGCCTCAAAATTGCAGGCTAGAAGTCCAAAATACATATCCTTGCTNAATCATATTCGCGTATATTTACCAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E549287" ref_strand="+" ref_description="SGN-E549287 [TUS-69-A11]">
      <seq>aaatagagaaagaattatccattaaaattagaagaaaaaaaacacagaataacacaaaaataggccattacatcccatcttccccttttttttctctttctgtattccattcttctcatctcaatttttttttagctcatttcagctcaagaatcaaatttccacctccgattttgttcggatttattcatcagattcaaattttcgttttttggggttgatttaattcattcgtttcatacagagattttttttttttgcacacacagatgtgtgtgtgtttatgaagaaattggtaatagaaggttgtagacgtttccgtttattatagaagctatagctcggtttgggttttttggaggaggtgagagaatccagtacattggtctcgaaagggaccgttaacggtaagatcctcaaaatttctgttttggtggatctgatggtgaaatgagcgaatttggacggtttaagcattacccagaattggaaaagaggttaagaatcttcaaattggtattgtggtggatctgggtggtgaaaaagatcatttcttgattgttttaagattgccccactgcgtagaataaaaggagagatagtgggtgccgtcccttatttaaggtagctttttgtttagctttgtttggagttttggggaattgggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="50396" stop="49144"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50096" g_stop="49444" g_length="653"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="668" r_length="668" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E549287" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50096" e_stop="49444"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATAGAGAAAGAATTATCCATTAAAATTAGAAGAAAAAAAAACACAGAATAACACAAAAATAGGCCATTACATCCCATCTTCCCC-TTTTTTTCTCTTTCTGTATTCCATTCTTCTCATCTCAATTTTTTTTTTTAGCTCATTTCAGCTCAAGAACCAAATTCCCACCTCCGATTCTGTTCGGATTTATTCATCAGATTCAAATTTTCGTTTTTTGGGGTTGATTTAATTCATTCGTTTCATACAGAGA---TTTTTTTTTGCACACAGATGTGTGTGTGTGTTTATGAAGAAATTGGTAATAGAAGGTTGTAGACGTTTCCGTTTATTATAGAAGCTATAGCTCGGTTTGGGTTTTTAGGAGGAGGTGAGAGAATCCAGTACATTGGTCTCGAAAGGGACCGTTAACGGTAAGATCCTCAAAATTTCTGTTTTGGTGGATCTGATGGTGAAATGAGCGAATTTGGAC-G-----G--TT-----GAATTGGAAAAGAGGTTAAGAGTCTTCAAATTTGTATTGTGGTGGATAT-GGTGGTGAAAAAGATCATTTCTTGATTGTTTTAAGATTGCCCCACTGCGTAGAATAAAGGGAGAGATAGTGGGTGCCGTCCCTTATTTAAGGTAGCTTTTTGTTTAGCTTTGTTTGGAGTTTTGGTGAATTGGGG</genome_strand>
        <mrna_strand>AAATAGAGAAAGAATTATCCATTAAAATTAGAAG-AAAAAAAACACAGAATAACACAAAAATAGGCCATTACATCCCATCTTCCCCTTTTTTTTCTCTTTCTGTATTCCATTCTTCTCATCTCAA--TTTTTTTTTAGCTCATTTCAGCTCAAGAATCAAATTTCCACCTCCGATTTTGTTCGGATTTATTCATCAGATTCAAATTTTCGTTTTTTGGGGTTGATTTAATTCATTCGTTTCATACAGAGATTTTTTTTTTTTGCACACACAGATGTGTGTGTGTTTATGAAGAAATTGGTAATAGAAGGTTGTAGACGTTTCCGTTTATTATAGAAGCTATAGCTCGGTTTGGGTTTTTTGGAGGAGGTGAGAGAATCCAGTACATTGGTCTCGAAAGGGACCGTTAACGGTAAGATCCTCAAAATTTCTGTTTTGGTGGATCTGATGGTGAAATGAGCGAATTTGGACGGTTTAAGCATTACCCAGAATTGGAAAAGAGGTTAAGAATCTTCAAATTGGTATTGTGGTGGATCTGGGTGGTGAAAAAGATCATTTCTTGATTGTTTTAAGATTGCCCCACTGCGTAGAATAAAAGGAGAGATAGTGGGTGCCGTCCCTTATTTAAGGTAGCTTTTTGTTTAGCTTTGTTTGGAGTTTTGGGGAATTGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E359108" ref_strand="+" ref_description="SGN-E359108 [cLHT-11-F20]">
      <seq>aatagagaaagaattatccattaaaattagaagaaaaaaaacacagaataacacaaaaataggccattacatcccatcttccccttttttttctctttctgtattccattcttctcatctcaatttttttttagctcatttcagctcaagaatcaaatttccacctccgattttgttcggatttattcatcagattcaaattttcgttttttggggttgatttaattcattcgtttcatacagagattttttttttttgcacacacagatgtgtgtgtgtttatgaagaaattggtaatagaaggttgtagacgtttccgtttattatagaagctatagctcggtttgggttttttggaggaggtgagagaatccagtacattggtctcgaaagggaccgttaacggtaagatcctcaaaatttctgttttggtggatctgatggtgaaatgagcgaatttggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="50395" stop="49332"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50095" g_stop="49632" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="465" r_length="465" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E359108" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E359108" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50095" e_stop="49632"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAGAGAAAGAATTATCCATTAAAATTAGAAGAAAAAAAAACACAGAATAACACAAAAATAGGCCATTACATCCCATCTTCCCC-TTTTTTTCTCTTTCTGTATTCCATTCTTCTCATCTCAATTTTTTTTTTTAGCTCATTTCAGCTCAAGAACCAAATTCCCACCTCCGATTCTGTTCGGATTTATTCATCAGATTCAAATTTTCGTTTTTTGGGGTTGATTTAATTCATTCGTTTCATACAGAGA---TTTTTTTTTGCACACAGATGTGTGTGTGTGTTTATGAAGAAATTGGTAATAGAAGGTTGTAGACGTTTCCGTTTATTATAGAAGCTATAGCTCGGTTTGGGTTTTTAGGAGGAGGTGAGAGAATCCAGTACATTGGTCTCGAAAGGGACCGTTAACGGTAAGATCCTCAAAATTTCTGTTTTGGTGGATCTGATGGTGAAATGAGCGAATTTGGAC</genome_strand>
        <mrna_strand>AATAGAGAAAGAATTATCCATTAAAATTAGAAGA-AAAAAAACACAGAATAACACAAAAATAGGCCATTACATCCCATCTTCCCCTTTTTTTTCTCTTTCTGTATTCCATTCTTCTCATCTCAA--TTTTTTTTTAGCTCATTTCAGCTCAAGAATCAAATTTCCACCTCCGATTTTGTTCGGATTTATTCATCAGATTCAAATTTTCGTTTTTTGGGGTTGATTTAATTCATTCGTTTCATACAGAGATTTTTTTTTTTTGCACACACAGATGTGTGTGTGTTTATGAAGAAATTGGTAATAGAAGGTTGTAGACGTTTCCGTTTATTATAGAAGCTATAGCTCGGTTTGGGTTTTTTGGAGGAGGTGAGAGAATCCAGTACATTGGTCTCGAAAGGGACCGTTAACGGTAAGATCCTCAAAATTTCTGTTTTGGTGGATCTGATGGTGAAATGAGCGAATTTGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E235718" ref_strand="+" ref_description="SGN-E235718 [cLED-15-F4]">
      <seq>tattatcaggacccgaatgtggtgcgacttttgggatcaaatggccctttcaggactggtgagataactgcagtgtccctaaatggtgcagagaatttgactcctgcaaatataaatcccaacttttttatccaacctctgagaagtgggtcttggggaggaggccaaaggaaaattaagatgaagcctgtatggtgtcatatttgcaaaattgaatttaccggccaaactgttcttgaccaacatatattaggcaaaaaacacaaaagaagtttggataacttaaaaggaggcagtgttatcacagcttctacttctgcccctcttggtacttctgtagcgtcagagaacccattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="56926" stop="53235"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56626" g_stop="56564" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56563" i_stop="53829" i_length="2735">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53828" g_stop="53535" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="357" r_length="294" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E235718" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>357</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56626" e_stop="56564"/>
          <exon e_start="53828" e_stop="53535"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTATCAGGACCCGAATGTGGTGCGACTTTTGGGATCAAATGGCCCTTTCAGGACTGGTGAGGTCAGTTGTAAACACTTCTGTTGTTAATTATCTGTTGTTAATTGAGCATATTTGAATATCAGCAAATTTGGTATACATGTTCCATCTATATAAGATATGTTTATTGGATTGATGTGTTGTATTAGTTATGATGAAGTGAAATATGAATGTTTGAAATGTAAATAGTTAAGCCCGCGTCTGATTAGCTTGTTGGTGAGTCAATAGCTTACCAAGGCGATGATTAGCAGGTCTAAGTCCGAGAGGATGATCAGTCACACTGGGACTGAGACATGGACTAGAATGTTCTCCATGGGGTTGGTCTAGGAGTCTTATGAGTTGATGTACAAACCTTGGGAATCTAGGTTTGAGTTTTCAGCAAAGGTGACATTCAGTGGATTTTCTTGTATTCCTATGTATTGATGGATAGAGTTATCCTGTAGAGAGGGTGGAGAGGGGTGGAAGGGGGTTCATTCACCGTGGAAGTTATCTTGTAGATACAAGGTCAATTATTATTTTCCTGTTATGTATACATAGGTCATTCGCTATTGTGTAGCTCAAACATTTCTTTTGTTGGGAGGGATATAATTTGAGTTTTTATCAGTTGCTAAACTCATATGAATAATATTGTTAATGGTTTGATACTAATCATTGTGTCGCGTCATGAAATATAAAATTTGGAACATATAAATTGGAATAAAGAGGGAGTTATTTTGGTGTCTTTCAAGTATTACCATCAGTATCCTTTGGCCTGTTTCATTCTAATTATGGAGGGATTATATGATTTTGGTGTCATTTAATAATAACATTTTTCAAACGATTGTAAAATTCGTTAATGTTTTCTTTTGTTCCATAGAGTATTCAAATTCATACCGCAAAGATGAAAATGAATGCCTACATAATGTAGCCAGATCCATAACTACTGCAGCGTCTTATTTCTCCCGTTAACTTTTAATTCCTATAAACGAGTACTGATGGTAATAATATTGTGATGAAGAACCATCTGGATTTCGTGAGTTGATTTTGGTGGAAAATTCGAGAAGGTTTGAAGAAAAGTATTTGGATTTTAAGTAAGAAACAAGAAGGCTAAATACCTAGATAGTGCCTTAAACGTGGCACATTTTTGTAATATAAACTTATGAAGTTACCAGTTAGACACTTTTAACTTGACATGAATAGGCCATATAAGGACCTCATGCTGACATGGCAAATCATGTGATTTATACTCGTATCTATGTGCGTGAGAAAGCCTAGATTATGTATTTTTGCTTTTTATGTTTCAGTATCGTATTCTTATTTCTATTAGAACTAATATCTTACCTGTAGTTGTCAATGGTAGCAAGGGTTGAGGGGAAAGGGAGACAATGAAGCTGGGTTTGCAGAGAAGATATGAGAGAGGGCTACAGGTGGAGGAGGGAGGAGTGGGGATTGAGGAAGAAAGGAGAAATCATTGGGGGATTGCTGTAGGGTGCAGATGAAAAAGAATAAGCGGGCTAGTAGGGATGTAGTCTTGTGGGAGAGGGGGTTGTTTTTTATTTATTATTTTTCTATTTTTGACACGTGTCCTTTTTTCATTCGTTACTTGATAGATCACCAGCAAATGTTTTTCACGCCCTTGGTTTTGATGAACTATGTGTTTAGAGGATACATTGTTATCAAGTATCTAATTGGTCAATCTGTAAGTTTATAAGGCTAACACGTCAAGTTTAAGGGGTTTATCTAGGTAGCAAGTCAAACAAGAAAGAGTAAAAGTAAGGGCAAGTGATACAACGGCTACTTCTAAACTATCCAAAATGTCTCAGTTTATATGACTTTTATCGGAAGTGAGTCATCAAATCATCCAAAAGTCTCGCCTAAGCTCTTATATTTATTTTAATTGCAACCAAATCTTTAACATTTATCTTGGTGTTTCAAAACCATTTGTGTTATATGCAATAAACAAAGTGGTAAATTAAGGAATTTCTCTTACCGAGAAGGTGGTTCCAACTGTTAAATCCAACAATCTCTCTATATGCAACTAAACAGCAACAACTGATAAGAAAAGGGGGAGGTGGGAAACAATAATAAAGGTTACTTTTCGTGGAATCAGATTGTCTTTATACATGTAGGGACTGAGGTTCAGTGACTAATAAAGTCAGATCCTGTAGAAGTCTTCTATCTTGGATCAGTTGACATTTTTAAGGTTGGTTTTCCTGATTGAGGCAGTCCATGATAGTGTTGATGCTTTGCTAGTTTGACTTATTTTTTACTTCTATTTAATTTGTAAGAAAGACTAGGATATGAAATGAGCTGAAGTGGGGATTCATATAGCCGACCCCAACTTGTTTGGGACTGAGACGTTGTTGTACTGTTGATGATAGGTTGGTGTTCATGTGTAGATGCTTAAAAATGTTGCTAAATTTATGACATTTGATGATAAGTTATGCACCCGTCATCATGCAAGGGCCAAAGCTGGATCCCGTTAATAAAAGACCTACCTCCTCATGCTGTTTTTGTTCTGCAATTATTGACCACGTGTTTCATCCATGTGGTTGTATTAGATGATAATCTTTCGTGGGATTGACATCTCACTTGAAGTTTGTTCATTTGCTGCAGTAAATAATTCTTACAAACATCTCATCCACATACTAAATCTGGCACATCTATTTTCCTGCTTCGTCATATCACATATTTATATATTTAAATGGTTTCAGCATTCTATACTATATATAATTTCTCTTCTATTTAAAAAGAATGTAATCTGAGTAATTTATGTACAGATAACTGCAGTGTCCCTAAATGGTGCAGAGAATTTGACTCCTGCAAATATAAATCCCAACTTTTTTATCCAACCTCTGAGAAGTGGGTCTTGGGGAGGAGGCCAAAGGAAAATTAAGATGAAGCCTGTATGGTGTCATATTTGCAAAATTGAATTTACTGGCCAAACTGTTCTTGACCAACATATATTAGGCAAAAAACACAAAAGAAGTTTGGATAACTTAAAAGGAGGCAGTGTTATCACAGCTTCTACTTCTGCCCCTCTTGTTACTTCTGTAGCGTCAGAGAACCCATTT</genome_strand>
        <mrna_strand>TATTATCAGGACCCGAATGTGGTGCGACTTTTGGGATCAAATGGCCCTTTCAGGACTGGTGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACTGCAGTGTCCCTAAATGGTGCAGAGAATTTGACTCCTGCAAATATAAATCCCAACTTTTTTATCCAACCTCTGAGAAGTGGGTCTTGGGGAGGAGGCCAAAGGAAAATTAAGATGAAGCCTGTATGGTGTCATATTTGCAAAATTGAATTTACCGGCCAAACTGTTCTTGACCAACATATATTAGGCAAAAAACACAAAAGAAGTTTGGATAACTTAAAAGGAGGCAGTGTTATCACAGCTTCTACTTCTGCCCCTCTTGGTACTTCTGTAGCGTCAGAGAACCCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E276365" ref_strand="+" ref_description="SGN-E276365 [cLEN-17-I15]">
      <seq>caaagtatggtctatcggtatggacagatcaatggtgctactagctctgtggaagcaacgcaagtgtattatcaggacccgaatgtggtgcgacttttgggatcaaatggccctttcaggactggtgagataactgcagtgtccctaaatggtgcagagaatttgactcctgcaaatataaatcccaacttttttatccaacctctgagaagtgggtcttggggaggaggccaaaggaaaattaagatgaagcctgtatggtgtcatatttgcaaaattgaatttaccggccaaactgttcttgaccaacatatattaggcaaaaaacacaaaagaagtttggataacttaaaaggaggcagtgttatcacagcttctacttctgcccctcttgttacttctgtagcgtcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="56992" stop="53246"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56692" g_stop="56564" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56563" i_stop="53829" i_length="2735">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53828" g_stop="53546" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="412" r_length="283" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E276365" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>412</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276365" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56692" e_stop="56564"/>
          <exon e_start="53828" e_stop="53546"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGTATGGTCTATCGGTATGGACAGATCAATGGTGCTACTAGCTCTGTGGAAGCAACGCAAGTGTATTATCAGGACCCGAATGTGGTGCGACTTTTGGGATCAAATGGCCCTTTCAGGACTGGTGAGGTCAGTTGTAAACACTTCTGTTGTTAATTATCTGTTGTTAATTGAGCATATTTGAATATCAGCAAATTTGGTATACATGTTCCATCTATATAAGATATGTTTATTGGATTGATGTGTTGTATTAGTTATGATGAAGTGAAATATGAATGTTTGAAATGTAAATAGTTAAGCCCGCGTCTGATTAGCTTGTTGGTGAGTCAATAGCTTACCAAGGCGATGATTAGCAGGTCTAAGTCCGAGAGGATGATCAGTCACACTGGGACTGAGACATGGACTAGAATGTTCTCCATGGGGTTGGTCTAGGAGTCTTATGAGTTGATGTACAAACCTTGGGAATCTAGGTTTGAGTTTTCAGCAAAGGTGACATTCAGTGGATTTTCTTGTATTCCTATGTATTGATGGATAGAGTTATCCTGTAGAGAGGGTGGAGAGGGGTGGAAGGGGGTTCATTCACCGTGGAAGTTATCTTGTAGATACAAGGTCAATTATTATTTTCCTGTTATGTATACATAGGTCATTCGCTATTGTGTAGCTCAAACATTTCTTTTGTTGGGAGGGATATAATTTGAGTTTTTATCAGTTGCTAAACTCATATGAATAATATTGTTAATGGTTTGATACTAATCATTGTGTCGCGTCATGAAATATAAAATTTGGAACATATAAATTGGAATAAAGAGGGAGTTATTTTGGTGTCTTTCAAGTATTACCATCAGTATCCTTTGGCCTGTTTCATTCTAATTATGGAGGGATTATATGATTTTGGTGTCATTTAATAATAACATTTTTCAAACGATTGTAAAATTCGTTAATGTTTTCTTTTGTTCCATAGAGTATTCAAATTCATACCGCAAAGATGAAAATGAATGCCTACATAATGTAGCCAGATCCATAACTACTGCAGCGTCTTATTTCTCCCGTTAACTTTTAATTCCTATAAACGAGTACTGATGGTAATAATATTGTGATGAAGAACCATCTGGATTTCGTGAGTTGATTTTGGTGGAAAATTCGAGAAGGTTTGAAGAAAAGTATTTGGATTTTAAGTAAGAAACAAGAAGGCTAAATACCTAGATAGTGCCTTAAACGTGGCACATTTTTGTAATATAAACTTATGAAGTTACCAGTTAGACACTTTTAACTTGACATGAATAGGCCATATAAGGACCTCATGCTGACATGGCAAATCATGTGATTTATACTCGTATCTATGTGCGTGAGAAAGCCTAGATTATGTATTTTTGCTTTTTATGTTTCAGTATCGTATTCTTATTTCTATTAGAACTAATATCTTACCTGTAGTTGTCAATGGTAGCAAGGGTTGAGGGGAAAGGGAGACAATGAAGCTGGGTTTGCAGAGAAGATATGAGAGAGGGCTACAGGTGGAGGAGGGAGGAGTGGGGATTGAGGAAGAAAGGAGAAATCATTGGGGGATTGCTGTAGGGTGCAGATGAAAAAGAATAAGCGGGCTAGTAGGGATGTAGTCTTGTGGGAGAGGGGGTTGTTTTTTATTTATTATTTTTCTATTTTTGACACGTGTCCTTTTTTCATTCGTTACTTGATAGATCACCAGCAAATGTTTTTCACGCCCTTGGTTTTGATGAACTATGTGTTTAGAGGATACATTGTTATCAAGTATCTAATTGGTCAATCTGTAAGTTTATAAGGCTAACACGTCAAGTTTAAGGGGTTTATCTAGGTAGCAAGTCAAACAAGAAAGAGTAAAAGTAAGGGCAAGTGATACAACGGCTACTTCTAAACTATCCAAAATGTCTCAGTTTATATGACTTTTATCGGAAGTGAGTCATCAAATCATCCAAAAGTCTCGCCTAAGCTCTTATATTTATTTTAATTGCAACCAAATCTTTAACATTTATCTTGGTGTTTCAAAACCATTTGTGTTATATGCAATAAACAAAGTGGTAAATTAAGGAATTTCTCTTACCGAGAAGGTGGTTCCAACTGTTAAATCCAACAATCTCTCTATATGCAACTAAACAGCAACAACTGATAAGAAAAGGGGGAGGTGGGAAACAATAATAAAGGTTACTTTTCGTGGAATCAGATTGTCTTTATACATGTAGGGACTGAGGTTCAGTGACTAATAAAGTCAGATCCTGTAGAAGTCTTCTATCTTGGATCAGTTGACATTTTTAAGGTTGGTTTTCCTGATTGAGGCAGTCCATGATAGTGTTGATGCTTTGCTAGTTTGACTTATTTTTTACTTCTATTTAATTTGTAAGAAAGACTAGGATATGAAATGAGCTGAAGTGGGGATTCATATAGCCGACCCCAACTTGTTTGGGACTGAGACGTTGTTGTACTGTTGATGATAGGTTGGTGTTCATGTGTAGATGCTTAAAAATGTTGCTAAATTTATGACATTTGATGATAAGTTATGCACCCGTCATCATGCAAGGGCCAAAGCTGGATCCCGTTAATAAAAGACCTACCTCCTCATGCTGTTTTTGTTCTGCAATTATTGACCACGTGTTTCATCCATGTGGTTGTATTAGATGATAATCTTTCGTGGGATTGACATCTCACTTGAAGTTTGTTCATTTGCTGCAGTAAATAATTCTTACAAACATCTCATCCACATACTAAATCTGGCACATCTATTTTCCTGCTTCGTCATATCACATATTTATATATTTAAATGGTTTCAGCATTCTATACTATATATAATTTCTCTTCTATTTAAAAAGAATGTAATCTGAGTAATTTATGTACAGATAACTGCAGTGTCCCTAAATGGTGCAGAGAATTTGACTCCTGCAAATATAAATCCCAACTTTTTTATCCAACCTCTGAGAAGTGGGTCTTGGGGAGGAGGCCAAAGGAAAATTAAGATGAAGCCTGTATGGTGTCATATTTGCAAAATTGAATTTACTGGCCAAACTGTTCTTGACCAACATATATTAGGCAAAAAACACAAAAGAAGTTTGGATAACTTAAAAGGAGGCAGTGTTATCACAGCTTCTACTTCTGCCCCTCTTGTTACTTCTGTAGCGTCAG</genome_strand>
        <mrna_strand>CAAAGTATGGTCTATCGGTATGGACAGATCAATGGTGCTACTAGCTCTGTGGAAGCAACGCAAGTGTATTATCAGGACCCGAATGTGGTGCGACTTTTGGGATCAAATGGCCCTTTCAGGACTGGTGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACTGCAGTGTCCCTAAATGGTGCAGAGAATTTGACTCCTGCAAATATAAATCCCAACTTTTTTATCCAACCTCTGAGAAGTGGGTCTTGGGGAGGAGGCCAAAGGAAAATTAAGATGAAGCCTGTATGGTGTCATATTTGCAAAATTGAATTTACCGGCCAAACTGTTCTTGACCAACATATATTAGGCAAAAAACACAAAAGAAGTTTGGATAACTTAAAAGGAGGCAGTGTTATCACAGCTTCTACTTCTGCCCCTCTTGTTACTTCTGTAGCGTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E336843" ref_strand="+" ref_description="SGN-E336843 [cTOE-5-P4]">
      <seq>ttatctctaacatctattgctcaattttgctcacagttcaatggagtacaactacaattcatgggccggagtaccgacaaacccaaccttgtaccctaacccttcaccaccggtgatgatgaattccgatcaatctgtgcctcaaaaccctaaccctaattcatatgcacttggttatggtggaggacacgaattccaaggacaaagtatggtctatcggtatggacagatcaatggtgctactagctctgtggaagcaacgcaagtgtattatcaggacccgaatgtggtgcgacttttgagatcaaatggccctttcaggactggtgagataactgcagcgtccctaaatggtgcagagaatttgactcctgcaaatataaatcccaacttttttatccaacctctgaaaaatgggtcttggggaggaggccaaaggaaaatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="57194" stop="53414"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56894" g_stop="56564" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56563" i_stop="53829" i_length="2735">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53828" g_stop="53714" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="446" r_length="115" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E336843" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>446</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E336843" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56894" e_stop="56564"/>
          <exon e_start="53828" e_stop="53714"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATCTCTAACATCTATTGCTCAATTTTGCTCACAGTTCAATGGAGTACAACTACAATTCATGGGCCGGAGTACCGCCAAACCCAGCCTTGTACCCTAACCCTTCACCACCGGTGATGATGAATTCCGATCAATCTGTGCCTCAAAACCCTAACCCTAGTTCATATGCACTTGGTTATGGTGGAGGACACGAATTCCAAGGACAAAGTATGGTCTATCGGTATGGACAGATCAATGGTGCTACTAGCTCTGTGGAAGCAACGCAAGTGTATTATCAGGACCCGAATGTGGTGCGACTTTTGGGATCAAATGGCCCTTTCAGGACTGGTGAGGTCAGTTGTAAACACTTCTGTTGTTAATTATCTGTTGTTAATTGAGCATATTTGAATATCAGCAAATTTGGTATACATGTTCCATCTATATAAGATATGTTTATTGGATTGATGTGTTGTATTAGTTATGATGAAGTGAAATATGAATGTTTGAAATGTAAATAGTTAAGCCCGCGTCTGATTAGCTTGTTGGTGAGTCAATAGCTTACCAAGGCGATGATTAGCAGGTCTAAGTCCGAGAGGATGATCAGTCACACTGGGACTGAGACATGGACTAGAATGTTCTCCATGGGGTTGGTCTAGGAGTCTTATGAGTTGATGTACAAACCTTGGGAATCTAGGTTTGAGTTTTCAGCAAAGGTGACATTCAGTGGATTTTCTTGTATTCCTATGTATTGATGGATAGAGTTATCCTGTAGAGAGGGTGGAGAGGGGTGGAAGGGGGTTCATTCACCGTGGAAGTTATCTTGTAGATACAAGGTCAATTATTATTTTCCTGTTATGTATACATAGGTCATTCGCTATTGTGTAGCTCAAACATTTCTTTTGTTGGGAGGGATATAATTTGAGTTTTTATCAGTTGCTAAACTCATATGAATAATATTGTTAATGGTTTGATACTAATCATTGTGTCGCGTCATGAAATATAAAATTTGGAACATATAAATTGGAATAAAGAGGGAGTTATTTTGGTGTCTTTCAAGTATTACCATCAGTATCCTTTGGCCTGTTTCATTCTAATTATGGAGGGATTATATGATTTTGGTGTCATTTAATAATAACATTTTTCAAACGATTGTAAAATTCGTTAATGTTTTCTTTTGTTCCATAGAGTATTCAAATTCATACCGCAAAGATGAAAATGAATGCCTACATAATGTAGCCAGATCCATAACTACTGCAGCGTCTTATTTCTCCCGTTAACTTTTAATTCCTATAAACGAGTACTGATGGTAATAATATTGTGATGAAGAACCATCTGGATTTCGTGAGTTGATTTTGGTGGAAAATTCGAGAAGGTTTGAAGAAAAGTATTTGGATTTTAAGTAAGAAACAAGAAGGCTAAATACCTAGATAGTGCCTTAAACGTGGCACATTTTTGTAATATAAACTTATGAAGTTACCAGTTAGACACTTTTAACTTGACATGAATAGGCCATATAAGGACCTCATGCTGACATGGCAAATCATGTGATTTATACTCGTATCTATGTGCGTGAGAAAGCCTAGATTATGTATTTTTGCTTTTTATGTTTCAGTATCGTATTCTTATTTCTATTAGAACTAATATCTTACCTGTAGTTGTCAATGGTAGCAAGGGTTGAGGGGAAAGGGAGACAATGAAGCTGGGTTTGCAGAGAAGATATGAGAGAGGGCTACAGGTGGAGGAGGGAGGAGTGGGGATTGAGGAAGAAAGGAGAAATCATTGGGGGATTGCTGTAGGGTGCAGATGAAAAAGAATAAGCGGGCTAGTAGGGATGTAGTCTTGTGGGAGAGGGGGTTGTTTTTTATTTATTATTTTTCTATTTTTGACACGTGTCCTTTTTTCATTCGTTACTTGATAGATCACCAGCAAATGTTTTTCACGCCCTTGGTTTTGATGAACTATGTGTTTAGAGGATACATTGTTATCAAGTATCTAATTGGTCAATCTGTAAGTTTATAAGGCTAACACGTCAAGTTTAAGGGGTTTATCTAGGTAGCAAGTCAAACAAGAAAGAGTAAAAGTAAGGGCAAGTGATACAACGGCTACTTCTAAACTATCCAAAATGTCTCAGTTTATATGACTTTTATCGGAAGTGAGTCATCAAATCATCCAAAAGTCTCGCCTAAGCTCTTATATTTATTTTAATTGCAACCAAATCTTTAACATTTATCTTGGTGTTTCAAAACCATTTGTGTTATATGCAATAAACAAAGTGGTAAATTAAGGAATTTCTCTTACCGAGAAGGTGGTTCCAACTGTTAAATCCAACAATCTCTCTATATGCAACTAAACAGCAACAACTGATAAGAAAAGGGGGAGGTGGGAAACAATAATAAAGGTTACTTTTCGTGGAATCAGATTGTCTTTATACATGTAGGGACTGAGGTTCAGTGACTAATAAAGTCAGATCCTGTAGAAGTCTTCTATCTTGGATCAGTTGACATTTTTAAGGTTGGTTTTCCTGATTGAGGCAGTCCATGATAGTGTTGATGCTTTGCTAGTTTGACTTATTTTTTACTTCTATTTAATTTGTAAGAAAGACTAGGATATGAAATGAGCTGAAGTGGGGATTCATATAGCCGACCCCAACTTGTTTGGGACTGAGACGTTGTTGTACTGTTGATGATAGGTTGGTGTTCATGTGTAGATGCTTAAAAATGTTGCTAAATTTATGACATTTGATGATAAGTTATGCACCCGTCATCATGCAAGGGCCAAAGCTGGATCCCGTTAATAAAAGACCTACCTCCTCATGCTGTTTTTGTTCTGCAATTATTGACCACGTGTTTCATCCATGTGGTTGTATTAGATGATAATCTTTCGTGGGATTGACATCTCACTTGAAGTTTGTTCATTTGCTGCAGTAAATAATTCTTACAAACATCTCATCCACATACTAAATCTGGCACATCTATTTTCCTGCTTCGTCATATCACATATTTATATATTTAAATGGTTTCAGCATTCTATACTATATATAATTTCTCTTCTATTTAAAAAGAATGTAATCTGAGTAATTTATGTACAGATAACTGCAGTGTCCCTAAATGGTGCAGAGAATTTGACTCCTGCAAATATAAATCCCAACTTTTTTATCCAACCTCTGAGAAGTGGGTCTTGGGGAGGAGGCCAAAGGAAAATTA</genome_strand>
        <mrna_strand>TTATCTCTAACATCTATTGCTCAATTTTGCTCACAGTTCAATGGAGTACAACTACAATTCATGGGCCGGAGTACCGACAAACCCAACCTTGTACCCTAACCCTTCACCACCGGTGATGATGAATTCCGATCAATCTGTGCCTCAAAACCCTAACCCTAATTCATATGCACTTGGTTATGGTGGAGGACACGAATTCCAAGGACAAAGTATGGTCTATCGGTATGGACAGATCAATGGTGCTACTAGCTCTGTGGAAGCAACGCAAGTGTATTATCAGGACCCGAATGTGGTGCGACTTTTGAGATCAAATGGCCCTTTCAGGACTGGTGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACTGCAGCGTCCCTAAATGGTGCAGAGAATTTGACTCCTGCAAATATAAATCCCAACTTTTTTATCCAACCTCTGAAAAATGGGTCTTGGGGAGGAGGCCAAAGGAAAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E201200" ref_strand="+" ref_description="SGN-E201200 [cLEC-10-K1]">
      <seq>agctctccatttatctctaacatctattgctcaattttgctcacagttcaatggagtacaactacaattcatgggccggagtaccgccaaacccagccttgtaccctaacccttcaccaccggtgatgatgaattccgatcaatctgtgcctcaaaaccctaaccctagttcatatgcacttggttatggtggaggacacgaattccaaggacaaagtatggtctatcggtatggacagatcaatggtgctactagctctgtggaagcaacgcaagtgtattatcaggacccgaatgtggtgcgacttttgggatcaaatggccctttcaggactggtgagataactgcagtgtccctaaatggtgcagagaatttgactcctgcaaatataaatcccaacttttttatccaacctctgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="57204" stop="53449"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56904" g_stop="56564" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="341" r_length="341" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56563" i_stop="53829" i_length="2735">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53828" g_stop="53749" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="421" r_length="80" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E201200" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E201200" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56904" e_stop="56564"/>
          <exon e_start="53828" e_stop="53749"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTCTCCATTTATCTCTAACATCTATTGCTCAATTTTGCTCACAGTTCAATGGAGTACAACTACAATTCATGGGCCGGAGTACCGCCAAACCCAGCCTTGTACCCTAACCCTTCACCACCGGTGATGATGAATTCCGATCAATCTGTGCCTCAAAACCCTAACCCTAGTTCATATGCACTTGGTTATGGTGGAGGACACGAATTCCAAGGACAAAGTATGGTCTATCGGTATGGACAGATCAATGGTGCTACTAGCTCTGTGGAAGCAACGCAAGTGTATTATCAGGACCCGAATGTGGTGCGACTTTTGGGATCAAATGGCCCTTTCAGGACTGGTGAGGTCAGTTGTAAACACTTCTGTTGTTAATTATCTGTTGTTAATTGAGCATATTTGAATATCAGCAAATTTGGTATACATGTTCCATCTATATAAGATATGTTTATTGGATTGATGTGTTGTATTAGTTATGATGAAGTGAAATATGAATGTTTGAAATGTAAATAGTTAAGCCCGCGTCTGATTAGCTTGTTGGTGAGTCAATAGCTTACCAAGGCGATGATTAGCAGGTCTAAGTCCGAGAGGATGATCAGTCACACTGGGACTGAGACATGGACTAGAATGTTCTCCATGGGGTTGGTCTAGGAGTCTTATGAGTTGATGTACAAACCTTGGGAATCTAGGTTTGAGTTTTCAGCAAAGGTGACATTCAGTGGATTTTCTTGTATTCCTATGTATTGATGGATAGAGTTATCCTGTAGAGAGGGTGGAGAGGGGTGGAAGGGGGTTCATTCACCGTGGAAGTTATCTTGTAGATACAAGGTCAATTATTATTTTCCTGTTATGTATACATAGGTCATTCGCTATTGTGTAGCTCAAACATTTCTTTTGTTGGGAGGGATATAATTTGAGTTTTTATCAGTTGCTAAACTCATATGAATAATATTGTTAATGGTTTGATACTAATCATTGTGTCGCGTCATGAAATATAAAATTTGGAACATATAAATTGGAATAAAGAGGGAGTTATTTTGGTGTCTTTCAAGTATTACCATCAGTATCCTTTGGCCTGTTTCATTCTAATTATGGAGGGATTATATGATTTTGGTGTCATTTAATAATAACATTTTTCAAACGATTGTAAAATTCGTTAATGTTTTCTTTTGTTCCATAGAGTATTCAAATTCATACCGCAAAGATGAAAATGAATGCCTACATAATGTAGCCAGATCCATAACTACTGCAGCGTCTTATTTCTCCCGTTAACTTTTAATTCCTATAAACGAGTACTGATGGTAATAATATTGTGATGAAGAACCATCTGGATTTCGTGAGTTGATTTTGGTGGAAAATTCGAGAAGGTTTGAAGAAAAGTATTTGGATTTTAAGTAAGAAACAAGAAGGCTAAATACCTAGATAGTGCCTTAAACGTGGCACATTTTTGTAATATAAACTTATGAAGTTACCAGTTAGACACTTTTAACTTGACATGAATAGGCCATATAAGGACCTCATGCTGACATGGCAAATCATGTGATTTATACTCGTATCTATGTGCGTGAGAAAGCCTAGATTATGTATTTTTGCTTTTTATGTTTCAGTATCGTATTCTTATTTCTATTAGAACTAATATCTTACCTGTAGTTGTCAATGGTAGCAAGGGTTGAGGGGAAAGGGAGACAATGAAGCTGGGTTTGCAGAGAAGATATGAGAGAGGGCTACAGGTGGAGGAGGGAGGAGTGGGGATTGAGGAAGAAAGGAGAAATCATTGGGGGATTGCTGTAGGGTGCAGATGAAAAAGAATAAGCGGGCTAGTAGGGATGTAGTCTTGTGGGAGAGGGGGTTGTTTTTTATTTATTATTTTTCTATTTTTGACACGTGTCCTTTTTTCATTCGTTACTTGATAGATCACCAGCAAATGTTTTTCACGCCCTTGGTTTTGATGAACTATGTGTTTAGAGGATACATTGTTATCAAGTATCTAATTGGTCAATCTGTAAGTTTATAAGGCTAACACGTCAAGTTTAAGGGGTTTATCTAGGTAGCAAGTCAAACAAGAAAGAGTAAAAGTAAGGGCAAGTGATACAACGGCTACTTCTAAACTATCCAAAATGTCTCAGTTTATATGACTTTTATCGGAAGTGAGTCATCAAATCATCCAAAAGTCTCGCCTAAGCTCTTATATTTATTTTAATTGCAACCAAATCTTTAACATTTATCTTGGTGTTTCAAAACCATTTGTGTTATATGCAATAAACAAAGTGGTAAATTAAGGAATTTCTCTTACCGAGAAGGTGGTTCCAACTGTTAAATCCAACAATCTCTCTATATGCAACTAAACAGCAACAACTGATAAGAAAAGGGGGAGGTGGGAAACAATAATAAAGGTTACTTTTCGTGGAATCAGATTGTCTTTATACATGTAGGGACTGAGGTTCAGTGACTAATAAAGTCAGATCCTGTAGAAGTCTTCTATCTTGGATCAGTTGACATTTTTAAGGTTGGTTTTCCTGATTGAGGCAGTCCATGATAGTGTTGATGCTTTGCTAGTTTGACTTATTTTTTACTTCTATTTAATTTGTAAGAAAGACTAGGATATGAAATGAGCTGAAGTGGGGATTCATATAGCCGACCCCAACTTGTTTGGGACTGAGACGTTGTTGTACTGTTGATGATAGGTTGGTGTTCATGTGTAGATGCTTAAAAATGTTGCTAAATTTATGACATTTGATGATAAGTTATGCACCCGTCATCATGCAAGGGCCAAAGCTGGATCCCGTTAATAAAAGACCTACCTCCTCATGCTGTTTTTGTTCTGCAATTATTGACCACGTGTTTCATCCATGTGGTTGTATTAGATGATAATCTTTCGTGGGATTGACATCTCACTTGAAGTTTGTTCATTTGCTGCAGTAAATAATTCTTACAAACATCTCATCCACATACTAAATCTGGCACATCTATTTTCCTGCTTCGTCATATCACATATTTATATATTTAAATGGTTTCAGCATTCTATACTATATATAATTTCTCTTCTATTTAAAAAGAATGTAATCTGAGTAATTTATGTACAGATAACTGCAGTGTCCCTAAATGGTGCAGAGAATTTGACTCCTGCAAATATAAATCCCAACTTTTTTATCCAACCTCTGAG</genome_strand>
        <mrna_strand>AGCTCTCCATTTATCTCTAACATCTATTGCTCAATTTTGCTCACAGTTCAATGGAGTACAACTACAATTCATGGGCCGGAGTACCGCCAAACCCAGCCTTGTACCCTAACCCTTCACCACCGGTGATGATGAATTCCGATCAATCTGTGCCTCAAAACCCTAACCCTAGTTCATATGCACTTGGTTATGGTGGAGGACACGAATTCCAAGGACAAAGTATGGTCTATCGGTATGGACAGATCAATGGTGCTACTAGCTCTGTGGAAGCAACGCAAGTGTATTATCAGGACCCGAATGTGGTGCGACTTTTGGGATCAAATGGCCCTTTCAGGACTGGTGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACTGCAGTGTCCCTAAATGGTGCAGAGAATTTGACTCCTGCAAATATAAATCCCAACTTTTTTATCCAACCTCTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E285455" ref_strand="+" ref_description="SGN-E285455 [cLES-10-O13]">
      <seq>ttgtgtcaataacccaatgaagttcacagcaaatacataacttcagccaaattctcggtgaactccattgctgaagctctccatttatctctaacatctcttgctcaattttgctcacagttcactggcgtacaactacaattcatgggccggagtaccgccaaacccagccttgtaccctaacccttcaccaccggtgatgatgaattccgatcaatctgtgcctcaaaaccctaaccctagttcatatgcactagggtatggtggaggacacgaattccaaggacaaagcatggtctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="57277" stop="56378"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56977" g_stop="56678" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="301" r_length="301" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E285455" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>300</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E285455" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56977" e_stop="56678"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTGTCAATAACCCAATGAAGTT-ACAACAAATACATAACTTCAGCCAAATTCTCGGTGAACTCCATTGATGAAGCTCTCCATTTATCTCTAACATCTATTGCTCAATTTTGCTCACAGTTCAATGGAGTACAACTACAATTCATGGGCCGGAGTACCGCCAAACCCAGCCTTGTACCCTAACCCTTCACCACCGGTGATGATGAATTCCGATCAATCTGTGCCTCAAAACCCTAACCCTAGTTCATATGCACTTGGTTATGGTGGAGGACACGAATTCCAAGGACAAAGTATGGTCTAT</genome_strand>
        <mrna_strand>TTGTGTCAATAACCCAATGAAGTTCACAGCAAATACATAACTTCAGCCAAATTCTCGGTGAACTCCATTGCTGAAGCTCTCCATTTATCTCTAACATCTCTTGCTCAATTTTGCTCACAGTTCACTGGCGTACAACTACAATTCATGGGCCGGAGTACCGCCAAACCCAGCCTTGTACCCTAACCCTTCACCACCGGTGATGATGAATTCCGATCAATCTGTGCCTCAAAACCCTAACCCTAGTTCATATGCACTAGGGTATGGTGGAGGACACGAATTCCAAGGACAAAGCATGGTCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E327494" ref_strand="-" ref_description="SGN-E327494 [cTOC-19-J12]">
      <seq>agggactgctgggggacaaggctaatttgagcatatatgatcctcaagtgagtgaggaccaaattcagagagacctctcaatgaaaaagttcgattgggatcatcctcttcaccttcagccaatgagtccaacaaccgtgaaacaagtcagcgttgtttgggatgcctatacagcaactaaggatgcccatgctgtctgcatccttacagagtgggatgaatttaagtctctcgactataagaagatgtatgatagcatgcaaaaacctgcttttatatttgatggtaggaatgttgtggacgcggagaagcttagggagattggatttatagtctactcaattggtaagcctctggatgcttggctcaaggacatgccagctgttgcttaatcgctttacctggctcgagtagtagcttgttcacaaatcaaagatattacttatatgatgcagtcagctgggattcttacctttttttttttactacgttcagtttctgttttgttttatcccacttaggctgaaagaccattcatggtcactaccagactcttaatgtttcttttgtattgatgatatcacctttgtcatttaaaaaaaaaaaaaaaaaaaaatcgagatagttctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="59400" stop="24976"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59100" g_stop="58511" g_length="590"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="591" r_length="591" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58510" i_stop="57330" i_length="1181">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.887" a_score="0.66"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57329" g_stop="57289" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="592" r_stop="631" r_length="40" r_score="0.659"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E327494" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>631</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327494" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="59100" e_stop="58511"/>
          <exon e_start="57329" e_stop="57289"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATCCTCTTCACCTTCAGCCAATGAGTCCAACAACCGTGAAACAAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAGGATGCCCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTTTATATTTGATGGTAGGAATGTTGTGGACGCGGAGAAGCTTAGGGAGATTGGATTTATAGTCTACTCAATTGGTAAGCCTCTGGATGCTTGGCTCAAGGACATGCCAGCTGTTGCTTAATCGCTTTACCTGGCTCGAGTAGTAGCTTGTTCACAAATCAAAGATATTACTTATATGATGCAGTCAGCTGGGATTCTTACC-TTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTCATTTACTTGTCTTTGTCAGAGGATTTTGTTTGTTCGATTCAAAAATCTTGCTACCAAACATTTTGGGACAAGTTATAATATATGATATTCATAACTCATGAGTAGTGAGAGAAGAAGATAAATCTTAAATAATGTTCAGATAGAGAAATATGTGCTATGCATTTTTCTGAAAGAAAAATAAAAGAAGTAATTTGCTTAACAAGTTTTGACATAGCGCATATTGGTTTAGCAGTTAGAACTCAACCAAACTTATTTTATCTCTCCGTTCATTTTTACTTGTCACTTTTTGACTTACATATTTAATTAAAAAGCAATTATTAATGATATAAGTAGTTTACCCCATTATCTCTATTCATTACTTTTTCTATCCATATTTACTTGTTCATATTTTATTTGGTAACATTATTTATTCATTTTTTATTTGACACAAATAATTGACATAATGACTTTACTAATTTGCCATATTAATTTAAACATTTTCAAAATCAATTTACTCATTAAAGAGGTTCTACCTTTATCAAAAATAATAACTCTCTAAATAAATTGAGGATATAATAAGTATAAAATAATTTATTTTCTTGATTTTTTAAAAATGACAAGTAGAAAAATTAAAATTCGACAAGTAGAAAAGAACAAAAGGAGTCGGAGAATATTTTATGCTAAGGTAAAACTAAAACATGAAAAAAAAATATAATTTTGATTGGTTTGATAATTTTTATATTTAAAAAAATAAAAGAATCAAAATAGTATTAAAGTTTTGATACACTTATTGTAATTTGTTGAATCCTAATTTTTCATTCCTCTGCAGGTGTATTGTCGAGATTATTTTTTGGATAAATTCTTTTAAAAAAGACAAAATTATCAGGTGATTTGGAAATATATATATAATATGACACGCATTTAAATTTATATCCTTGTTATTCATGTTTTCATAACAATACACTTTTAAGTTTACTAAGAAAAAACAATTAAAATCCTTAAAGTTAGCTCATAAACAAAAAAAAAAGATAAATAATAATAATAATAAGCTCATAAACTAAGACAAAATTAAACTATGAGACAATATTAAACAATGAACTACCAAATGATCTTATTTTGTATACTATTACAAAAATAATAAAATCTGATATTTGTTTAAATATTTTTCCCACTTTTAATATTTATGTAAAATGCACTTTTAGGTTTAGAGAAAAAAAAATCAAACAAATTCTTAAAGTCAGCT</genome_strand>
        <mrna_strand>AGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATCCTCTTCACCTTCAGCCAATGAGTCCAACAACCGTGAAACAAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAGGATGCCCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTTTATATTTGATGGTAGGAATGTTGTGGACGCGGAGAAGCTTAGGGAGATTGGATTTATAGTCTACTCAATTGGTAAGCCTCTGGATGCTTGGCTCAAGGACATGCCAGCTGTTGCTTAATCGCTTTACCTGGCTCGAGTAGTAGCTTGTTCACAAATCAAAGATATTACTTATATGATGCAGTCAGCTGGGATTCTTACCTTTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTA-AAAAAAAAAAAAAAAAAAAATCGAGATAGTTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E711966" ref_strand="+" ref_description="SGN-E711966 [FB03CA12]">
      <seq>ccgctcatgctgtctgcatccttacagagtgggatgaatttaagtctctcgactataagaagatgtatgatagcatgcaaaaacctgcttttatatttgatggtaggaatgttgtggacgcggagaagcttagggagattggatttatagtctactcaattggtaagcctctggatgcttggctcaaggacatgccagctgttgcttaatcgctttacctggctcgagtagtagcttgttcacaaatcaaagatattacttatatgatgcagtcagctgggattcttaccttttttttttactacgttcagtttctgttttgttttatcccacttaggctgaaagaccattcatggtcactaccagactcttaatgtttcttttgtattgatgatatcacctttgtcatttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="59215" stop="24982"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58917" g_stop="58507" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="411" r_length="411" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58506" i_stop="57908" i_length="599">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.546" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57907" g_stop="57875" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="444" r_length="33" r_score="0.636"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E711966" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>444</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E711966" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58917" e_stop="58507"/>
          <exon e_start="57907" e_stop="57875"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCCCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTTTATATTTGATGGTAGGAATGTTGTGGACGCGGAGAAGCTTAGGGAGATTGGATTTATAGTCTACTCAATTGGTAAGCCTCTGGATGCTTGGCTCAAGGACATGCCAGCTGTTGCTTAATCGCTTTACCTGGCTCGAGTAGTAGCTTGTTCACAAATCAAAGATATTACTTATATGATGCAGTCAGCTGGGATTCTTACCTTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTCATTTACTTGTCTTTGTCAGAGGATTTTGTTTGTTCGATTCAAAAATCTTGCTACCAAACATTTTGGGACAAGTTATAATATATGATATTCATAACTCATGAGTAGTGAGAGAAGAAGATAAATCTTAAATAATGTTCAGATAGAGAAATATGTGCTATGCATTTTTCTGAAAGAAAAATAAAAGAAGTAATTTGCTTAACAAGTTTTGACATAGCGCATATTGGTTTAGCAGTTAGAACTCAACCAAACTTATTTTATCTCTCCGTTCATTTTTACTTGTCACTTTTTGACTTACATATTTAATTAAAAAGCAATTATTAATGATATAAGTAGTTTACCCCATTATCTCTATTCATTACTTTTTCTATCCATATTTACTTGTTCATATTTTATTTGGTAACATTATTTATTCATTTTTTATTTGACACAAATAATTGACATAATGACTTTACTAATTTGCCATATTAATTTAAACATTTTCAAAATCAATTTACTCATTAAAGAGGTTCTACCTTTATCAAAAATAATAACTCTCTAAATAAATTGAGGATATAATAAGTATAAAATAATTTATTTTCTTGATTTTTTAAAAATGACAAGTAGAAAAATTAAAATTCGACAAGTAGAAAAGAACAA</genome_strand>
        <mrna_strand>CCGCTCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTTTATATTTGATGGTAGGAATGTTGTGGACGCGGAGAAGCTTAGGGAGATTGGATTTATAGTCTACTCAATTGGTAAGCCTCTGGATGCTTGGCTCAAGGACATGCCAGCTGTTGCTTAATCGCTTTACCTGGCTCGAGTAGTAGCTTGTTCACAAATCAAAGATATTACTTATATGATGCAGTCAGCTGGGATTCTTACCTTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTCATTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E237361" ref_strand="+" ref_description="SGN-E237361 [cLEL-7-D7](-)">
      <seq>tgtatgatagcatgcaaaaacctgctatatatttgatggtaggaatgttgtggacgcggagaagcttagggagattggatttatagtctactcaattggtaagcctctggatgcttggctcaaggacatgccagctgttgcttaatcgctttacctggctcgagtagtagcttgttcacaaatcaaagatattacttatatgatgcagtcagctgggattcttaccttttttttttactacgttcagtttctgttttgttttatcccacttaggctgaaagaccattcatggtcactaccagactcttaatgtttcttttgtattgatgatatcacctttgtcatttacttgtctttgtcagaggattttgtttgttcgattcaaaaatcttgctaccaaacattttgggacaagttataatatatgatattcataactcatgagtagtgagagaagaagataaatcttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="59154" stop="51752"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58854" g_stop="58378" g_length="477"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="476" r_length="476" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58377" i_stop="57908" i_length="470">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.546" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57907" g_stop="57897" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="487" r_length="11" r_score="0.818"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E237361" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E237361" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58854" e_stop="58378"/>
          <exon e_start="57907" e_stop="57897"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTATGATAGCATGCAAAAACCTGCTTTTATATTTGATGGTAGGAATGTTGTGGACGCGGAGAAGCTTAGGGAGATTGGATTTATAGTCTACTCAATTGGTAAGCCTCTGGATGCTTGGCTCAAGGACATGCCAGCTGTTGCTTAATCGCTTTACCTGGCTCGAGTAGTAGCTTGTTCACAAATCAAAGATATTACTTATATGATGCAGTCAGCTGGGATTCTTACCTTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTCATTTACTTGTCTTTGTCAGAGGATTTTGTTTGTTCGATTCAAAAATCTTGCTACCAAACATTTTGGGACAAGTTATAATATATGATATTCATAACTCATGAGTAGTGAGAGAAGAAGATAAATCTTAAATAATGTTCAGATAGAGAAATATGTGCTATGCATTTTTCTGAAAGAAAAATAAAAGAAGTAATTTGCTTAACAAGTTTTGACATAGCGCATATTGGTTTAGCAGTTAGAACTCAACCAAACTTATTTTATCTCTCCGTTCATTTTTACTTGTCACTTTTTGACTTACATATTTAATTAAAAAGCAATTATTAATGATATAAGTAGTTTACCCCATTATCTCTATTCATTACTTTTTCTATCCATATTTACTTGTTCATATTTTATTTGGTAACATTATTTATTCATTTTTTATTTGACACAAATAATTGACATAATGACTTTACTAATTTGCCATATTAATTTAAACATTTTCAAAATCAATTTACTCATTAAAGAGGTTCTACCTTTATCAAAAATAATAACTCTCTAAATAAATTGAGGATATAATAAGTATAAAATAATTTATTTTCTTGATTTTTTAAAAATGACAAGTAGAAAAATTAAAA</genome_strand>
        <mrna_strand>TGTATGATAGCATGCAAAAACCTGC-TATATATTTGATGGTAGGAATGTTGTGGACGCGGAGAAGCTTAGGGAGATTGGATTTATAGTCTACTCAATTGGTAAGCCTCTGGATGCTTGGCTCAAGGACATGCCAGCTGTTGCTTAATCGCTTTACCTGGCTCGAGTAGTAGCTTGTTCACAAATCAAAGATATTACTTATATGATGCAGTCAGCTGGGATTCTTACCTTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTCATTTACTTGTCTTTGTCAGAGGATTTTGTTTGTTCGATTCAAAAATCTTGCTACCAAACATTTTGGGACAAGTTATAATATATGATATTCATAACTCATGAGTAGTGAGAGAAGAAGATAAATCTTAAAAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E236899" ref_strand="+" ref_description="SGN-E236899 [cLEL-7-D7](-)">
      <seq>atattacttatatatgcagtcagctgggattcttaccttttttttttactacgttcagtttctgttttgttttatcccacttaggctgaaagaccattcatggtcactaccagactcttaatgtttcttttgtattgatgatatcacctttgtcatttacttgtctttgtcagaggattttgtttgttcgattcaaaaatcttgctaccaaacattttgggacaagttataatatatgatattcataactcatgagtagtgagagaagaagataaatcttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="58965" stop="51752"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58665" g_stop="58378" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58377" i_stop="57908" i_length="470">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.546" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57907" g_stop="57897" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="298" r_length="11" r_score="0.818"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E236899" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>299</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E236899" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58665" e_stop="58378"/>
          <exon e_start="57907" e_stop="57897"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATTACTTATATGATGCAGTCAGCTGGGATTCTTACCTTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTCATTTACTTGTCTTTGTCAGAGGATTTTGTTTGTTCGATTCAAAAATCTTGCTACCAAACATTTTGGGACAAGTTATAATATATGATATTCATAACTCATGAGTAGTGAGAGAAGAAGATAAATCTTAAATAATGTTCAGATAGAGAAATATGTGCTATGCATTTTTCTGAAAGAAAAATAAAAGAAGTAATTTGCTTAACAAGTTTTGACATAGCGCATATTGGTTTAGCAGTTAGAACTCAACCAAACTTATTTTATCTCTCCGTTCATTTTTACTTGTCACTTTTTGACTTACATATTTAATTAAAAAGCAATTATTAATGATATAAGTAGTTTACCCCATTATCTCTATTCATTACTTTTTCTATCCATATTTACTTGTTCATATTTTATTTGGTAACATTATTTATTCATTTTTTATTTGACACAAATAATTGACATAATGACTTTACTAATTTGCCATATTAATTTAAACATTTTCAAAATCAATTTACTCATTAAAGAGGTTCTACCTTTATCAAAAATAATAACTCTCTAAATAAATTGAGGATATAATAAGTATAAAATAATTTATTTTCTTGATTTTTTAAAAATGACAAGTAGAAAAATTAAAA</genome_strand>
        <mrna_strand>ATATTACTTATAT-ATGCAGTCAGCTGGGATTCTTACCTTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTCATTTACTTGTCTTTGTCAGAGGATTTTGTTTGTTCGATTCAAAAATCTTGCTACCAAACATTTTGGGACAAGTTATAATATATGATATTCATAACTCATGAGTAGTGAGAGAAGAAGATAAATCTTAAAAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E217020" ref_strand="-" ref_description="SGN-E217020 [cLEL-1-H19](-)">
      <seq>tttttttttttttttttttaaatgacaaaggtgatatcatcaatacagaagaaacattaagagtctggtagtgaccatgaatggtctttcagcctaagtgggataaaacaaaacagaaactgaacgtagtaaaaaaaaaaggtaagaatcccagctgactgcatcatataagtaatatctttgatttgtgaacaagctactactcgagccaggtaaagcgattaagcaacagctggcatgtccttgagccaagcatccagaggcttaccaattgagtagactataaatccaatctccctaagcttctccgcgtccacaacattcctaccatcaaatataaaagcaggtttttgcatgctatcatacatcttcttatagtcgagagacttaaattcatcccactctgtaaggatgcagacagcatgggcatccttagttgctgtataggcatcccaaacaacgctgacttgtttcacggttgttggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="24990" stop="59274"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57940" g_stop="57957" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="18" r_length="18" r_score="0.611"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57958" i_stop="58505" i_length="548">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58506" g_stop="58974" g_length="469"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="487" r_length="469" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E217020" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E217020" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="57940" e_stop="57957"/>
          <exon e_start="58506" e_stop="58974"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTATTTTATACTTATTATATCCTCAATTTATTTAGAGAGTTATTATTTTTGATAAAGGTAGAACCTCTTTAATGAGTAAATTGATTTTGAAAATGTTTAAATTAATATGGCAAATTAGTAAAGTCATTATGTCAATTATTTGTGTCAAATAAAAAATGAATAAATAATGTTACCAAATAAAATATGAACAAGTAAATATGGATAGAAAAAGTAATGAATAGAGATAATGGGGTAAACTACTTATATCATTAATAATTGCTTTTTAATTAAATATGTAAGTCAAAAAGTGACAAGTAAAAATGAACGGAGAGATAAAATAAGTTTGGTTGAGTTCTAACTGCTAAACCAATATGCGCTATGTCAAAACTTGTTAAGCAAATTACTTCTTTTATTTTTCTTTCAGAAAAATGCATAGCACATATTTCTCTATCTGAACATTATTTAAGATTTATCTTCTTCTCTCACTACTCATGAGTTATGAATATCATATATTATAACTTGTCCCAAAATGTTTGGTAGCAAGATTTTTGAATCGAACAAACAAAATCCTCTGACAAAGACAAGTAAATGACAAAGGTGATATCATCAATACAAAAGAAACATTAAGAGTCTGGTAGTGACCATGAATGGTCTTTCAGCCTAAGTGGGATAAAACAAAACAGAAACTGAACGTAGTAAAAAAAAAAGGTAAGAATCCCAGCTGACTGCATCATATAAGTAATATCTTTGATTTGTGAACAAGCTACTACTCGAGCCAGGTAAAGCGATTAAGCAACAGCTGGCATGTCCTTGAGCCAAGCATCCAGAGGCTTACCAATTGAGTAGACTATAAATCCAATCTCCCTAAGCTTCTCCGCGTCCACAACATTCCTACCATCAAATATAAAAGCAGGTTTTTGCATGCTATCATACATCTTCTTATAGTCGAGAGACTTAAATTCATCCCACTCTGTAAGGATGCAGACAGCATGGGCATCCTTAGTTGCTGTATAGGCATCCCAAACAACGCTGACTTGTTTCACGGTTGTTGGAC</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGACAAAGGTGATATCATCAATACAGAAGAAACATTAAGAGTCTGGTAGTGACCATGAATGGTCTTTCAGCCTAAGTGGGATAAAACAAAACAGAAACTGAACGTAGTAAAAAAAAAAGGTAAGAATCCCAGCTGACTGCATCATATAAGTAATATCTTTGATTTGTGAACAAGCTACTACTCGAGCCAGGTAAAGCGATTAAGCAACAGCTGGCATGTCCTTGAGCCAAGCATCCAGAGGCTTACCAATTGAGTAGACTATAAATCCAATCTCCCTAAGCTTCTCCGCGTCCACAACATTCCTACCATCAAATATAAAAGCAGGTTTTTGCATGCTATCATACATCTTCTTATAGTCGAGAGACTTAAATTCATCCCACTCTGTAAGGATGCAGACAGCATGGGCATCCTTAGTTGCTGTATAGGCATCCCAAACAACGCTGACTTGTTTCACGGTTGTTGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E215350" ref_strand="+" ref_description="SGN-E215350 [cLEL-20-O14](-)">
      <seq>ttatatgatgcagtcagctgggattcttaccttttttttttactacgttcagtttctgttttgttttatcccacttaggctgaaagaccattcatggtcactaccagactcttaatgtttcttttgtattgatgatatcacctttgtcatttacttgtctttgtcagaggattttgtttgttcgattcaaaaatcttgctaccaaacattttgggacaagttataatatatgatattcataactcatgagtagtgagagaagacacaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="58958" stop="58089"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58658" g_stop="58379" g_length="280"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="280" r_length="280" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E215350" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>280</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E215350" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58658" e_stop="58379"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATATGATGCAGTCAGCTGGGATTCTTACCTTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTCATTTACTTGTCTTTGTCAGAGGATTTTGTTTGTTCGATTCAAAAATCTTGCTACCAAACATTTTGGGACAAGTTATAATATATGATATTCATAACTCATGAGTAGTGAGAGAAGAAGATAAATCTTAAATAA</genome_strand>
        <mrna_strand>TTATATGATGCAGTCAGCTGGGATTCTTACCTTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTCATTTACTTGTCTTTGTCAGAGGATTTTGTTTGTTCGATTCAAAAATCTTGCTACCAAACATTTTGGGACAAGTTATAATATATGATATTCATAACTCATGAGTAGTGAGAGAAGACACAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E288056" ref_strand="+" ref_description="SGN-E288056 [cLES-7-J10]">
      <seq>tcagagagacctctcaatgaaaaagttcgattgggatcattctcttcaccttcagccaatgagtccaacaaccgtgaaacaagtcagcgttgtttgggatgcctatacagcaactaaggatgcccatgctgtctgcatccttacagagtgggatgaatttaagtctctcgactataagaagatgtatgatagcatgcaaaaacctgcttttatatttgatggtaggaatgttgtggacgcggagaagcttagggagattggatttatagtctactcaattggtaagcctctggatgcttggctcaaggacatgccagctgttgcttaatcgctttacctggctcgagtagtagcttgttcacaaatcaaagatattacttatatgatgcagtcagctgggattcttacctttttttttttactacgttcagtttctgttttgttttatcccacttaggctgaaagaccattcatggtcactaccagactcttaatgtgtcttttgtattgatgatatcacctttgtcatttacttgtctttgtcagaagattttgtttgttcgattcaaaaatcttgctaccaaacattttgggacaaggtataatatatgatattcataaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="59336" stop="58117"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59036" g_stop="58409" g_length="628"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="629" r_length="629" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E288056" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E288056" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59036" e_stop="58409"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATCCTCTTCACCTTCAGCCAATGAGTCCAACAACCGTGAAACAAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAGGATGCCCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTTTATATTTGATGGTAGGAATGTTGTGGACGCGGAGAAGCTTAGGGAGATTGGATTTATAGTCTACTCAATTGGTAAGCCTCTGGATGCTTGGCTCAAGGACATGCCAGCTGTTGCTTAATCGCTTTACCTGGCTCGAGTAGTAGCTTGTTCACAAATCAAAGATATTACTTATATGATGCAGTCAGCTGGGATTCTTACC-TTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTCATTTACTTGTCTTTGTCAGAGGATTTTGTTTGTTCGATTCAAAAATCTTGCTACCAAACATTTTGGGACAAGTTATAATATATGATATTCATAACTCATGAG</genome_strand>
        <mrna_strand>TCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATTCTCTTCACCTTCAGCCAATGAGTCCAACAACCGTGAAACAAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAGGATGCCCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTTTATATTTGATGGTAGGAATGTTGTGGACGCGGAGAAGCTTAGGGAGATTGGATTTATAGTCTACTCAATTGGTAAGCCTCTGGATGCTTGGCTCAAGGACATGCCAGCTGTTGCTTAATCGCTTTACCTGGCTCGAGTAGTAGCTTGTTCACAAATCAAAGATATTACTTATATGATGCAGTCAGCTGGGATTCTTACCTTTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTGTCTTTTGTATTGATGATATCACCTTTGTCATTTACTTGTCTTTGTCAGAAGATTTTGTTTGTTCGATTCAAAAATCTTGCTACCAAACATTTTGGGACAAGGTATAATATATGATATTCATAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E745853" ref_strand="+" ref_description="SGN-E745853 [GI|47104963]">
      <seq>gggcttcaagaagactcgtcattcgtcaagctctgctgcagcgttgggttagatctaagatttgacaccaaaacagactatttaagaatgtccccgccttcttagctctcataattctcttcatctttttccagatccattttccctcttctctcgtgaaactacggtttggaacaaaggaaaatggttaagatttgctgtataggagctggatatgttggggggcccaccatggctgtcatagcactcaaatgcccttctattgaagtggttgttgttgatatttctgtgcctcgtatcacagcctggaacagtgatacactccccatatatgagccaggcctctatgatatagtcaaggagtgccgaggcaggaacctcttcttcagcacagatgtggagaaacatgtgcgggaggctgatatcgtttttgtttctgtgaatactcctaccaagacaaggggtctcggagcaggcaaggctgcagatctaacttattgggagagtgcagctcgcatgatagctgatgtctcaaaatctgataagatagttgttgagaaatcaactgttcctgtcaaaactgccgaggcaattgaaaagattttgacccacaacagcaagggcattaacttccagatcctctcaaaccctgagttccttgcagaagggaccgctatcgaagacctttttaaacctgacagggtcctaatcggaggtcgggaaactccaggggggcagaaggctatccaagcattgaaggatgtttatgcccaatgggtccctgaagaacgcatcctcaccaccaatttgtggtcagctgagctctcaaaattggctgccaatgcatttttggcacaaagaatctcttctgtgaatgccatgtcagctctttgtgaggctactggagcaaatgtctcacaggtagcgtatgctgttggaaaggactcgaggattggtcccaagttccttaatgccagtgttggttttggtggctcttgcttccagaaggatattctgaatctggtttacatttgtgagtgcaatggtcttccagaggtagctgaatactggaaacaggttatcaagatcaatgactatcagaagaatcgttttgtcaaccgcgttgttgcctccatgttcaacacagtatcaggcaagaaagtcgccattttaggtttcgctttcaagaaggatactggtgatactcgagagacccctgcaattgatgtttgcaagggactgctgggggacaaggctaatttgagcatatatgatcctcaagtgagtgaggaccaaattcagagagacctctcaatgaaaaagttcgattgggatcatcctcttcaccttcagccaatgagtccaacaaccgtgaaacaagtcagcgttgtttgggatgcctatacagcaactaaggatgcccatgctgtctgcatccttacagagtgggatgaatttaagtctctcgactataagaagatgtatgatagcatgcaaaaacctgcttttatatttgatggtaggaatgttgtggacgcggagaagcttagggagattggatttatagtctactcaattggtaagcctctggatgcttggctcaaggacatgccagctgttgcttaatcgctttacctggctcgagtagtagcttgttcacaaatcaaagatattacttatatgatgcagtcagctgggattcttaccttttttttttttactacgttcagtttctgttttgttttatcccacttaggctgaaagaccattcatggtcactaccagactcttaatgtttcttttgtattgatgatatcacctttgtcatccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="61785" stop="58209"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61486" g_stop="61320" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="167" r_length="167" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61319" i_stop="60168" i_length="1152">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.767" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60167" g_stop="58511" g_length="1657"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="1826" r_length="1659" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1831" polyA_stop="1845"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E745853" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1824</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745853" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61486" e_stop="61320"/>
          <exon e_start="60167" e_stop="58511"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCTTCAAGAAGACTCGTCATTCGTCAAGCTCTGCTGCAGCGTTGGGTTAGATCTAAGATTTGACACCAAAACAGACTATTTAAGAATGTCCCCGCCTTCTTAGCTCTCATAATTCTCTTCATCTTTTTCCAGATCCATTTTCCCTCTTCTCTCGTGAAACTACGGGTACTCTTTCTCTTCACTCCATTTCTTATTGATTTTGCAGGTGAGTGATGATAATTTGCTTCATTCATTTTGTTATTGATTCACTTTCTCCTCAAGTTTTTTTCGAAGATGTGAATTTTGAGCGTTTTTTTGATTGTCGGTGTGCTTAGTCTTGATATGTAATCTTCGGTTTCCTGCGGAAATGCGTGGTTGATTGTTGTGATTTCTCTAGATCTAATGTTTGATTTGATAATTTATTGGTTGATTTGTGATATGAGTTGATCTGGTGAATGTCAGTGGAATTTTAGCTCAGAGCGAGAGGAGGACTCTGAATCTGACTGTTTTTTTATTTAGATCCGTTTAAGTTCATGATTAGTAAATGTAATTGCTTGTGGAATTTTGTTGTCCAATTAATGAAATTCTCACATTTCGTTTTGTTGATTGGTGCATATTTGATCGAATTCTCAAGTTATATGTAAACAGTACCATACGTGAATCTGTGAGTGTGGCTTATCAAGTAGAATAAACTATAAAGTAAAATGTACAGCAGGGGAGAGGCGAATCACTTGATAAGTGCACCATTTAGGCTTCTTGTAGTAAGCGTGTTTTAGAACATATTTGCATAAAATATCTAGTTTTATGGAGAGATCACGTGTTCGCATGCCCCATAATATGGCCTATAAGTTTACCCCTGTCGCAGTGCGTAGGCAACATGTGTTTCTGTTTAATTCCTTCTTTAGACTAAAACTTTATACTGTTGTTGTGCTAAAATACGTGAAAGCCTACTCCTTTATGATGTAATACATTTAGGGATTAAGAATGTAGATCTGGTGGTTGGTAGTTAGCTCATATTATGTATATGCTATCAGTTTTGGTTGTGGATATCACTGTAGGACTAGGACAAGCATTTGCTGAGCAGGGTCAGTGAATGGCAATATATAAAGACAGTCAATGAATCTACCAAGTGTACCTCGATACCAACGCTGGTCTATATGACTCCTCTACATTCTTTCTCCACTATTTGGGTCCATTTTGTTCCTCTATAAACACATTCAAACTTTTGTCAAAAATTTTGTGCATATTGCTCATTAGTCCTTACATTATGAGATGCCTTTATGTTGTGAGTAATACAGCCTCAAAATACATGGAGTCATGAACTTTTATATCTTGCAGTTTGGAACAAAGGAAAATGGTTAAGATTTGCTGTATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGTTGTTGATATTTCTGTGCCTCGTATCACAGCCTGGAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTCTTCTTCAGCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTACCAAGACAAGGGGTCTCGGAGCAGGCAAGGCTGCAGATCTAACTTATTGGGAGAGTGCAGCTCGCATGATAGCTGATGTCTCAAAATCTGATAAGATAGTTGTTGAGAAATCAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTCCAGATCCTCTCAAACCCTGAGTTCCTTGCAGAAGGGACCGCTATCGAAGACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGGGAAACTCCAGGGGGGCAGAAGGCTATCCAAGCATTGAAGGATGTTTATGCCCAATGGGTCCCTGAAGAACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAGAGACCCCTGCAATTGATGTTTGCAAGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATCCTCTTCACCTTCAGCCAATGAGTCCAACAACCGTGAAACAAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAGGATGCCCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTTTATATTTGATGGTAGGAATGTTGTGGACGCGGAGAAGCTTAGGGAGATTGGATTTATAGTCTACTCAATTGGTAAGCCTCTGGATGCTTGGCTCAAGGACATGCCAGCTGTTGCTTAATCGCTTTACCTGGCTCGAGTAGTAGCTTGTTCACAAATCAAAGATATTACTTATATGATGCAGTCAGCTGGGATTCTTACC--TTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTC</genome_strand>
        <mrna_strand>GGGCTTCAAGAAGACTCGTCATTCGTCAAGCTCTGCTGCAGCGTTGGGTTAGATCTAAGATTTGACACCAAAACAGACTATTTAAGAATGTCCCCGCCTTCTTAGCTCTCATAATTCTCTTCATCTTTTTCCAGATCCATTTTCCCTCTTCTCTCGTGAAACTACGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAACAAAGGAAAATGGTTAAGATTTGCTGTATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGTTGTTGATATTTCTGTGCCTCGTATCACAGCCTGGAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTCTTCTTCAGCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTACCAAGACAAGGGGTCTCGGAGCAGGCAAGGCTGCAGATCTAACTTATTGGGAGAGTGCAGCTCGCATGATAGCTGATGTCTCAAAATCTGATAAGATAGTTGTTGAGAAATCAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTCCAGATCCTCTCAAACCCTGAGTTCCTTGCAGAAGGGACCGCTATCGAAGACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGGGAAACTCCAGGGGGGCAGAAGGCTATCCAAGCATTGAAGGATGTTTATGCCCAATGGGTCCCTGAAGAACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAGAGACCCCTGCAATTGATGTTTGCAAGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATCCTCTTCACCTTCAGCCAATGAGTCCAACAACCGTGAAACAAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAGGATGCCCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTTTATATTTGATGGTAGGAATGTTGTGGACGCGGAGAAGCTTAGGGAGATTGGATTTATAGTCTACTCAATTGGTAAGCCTCTGGATGCTTGGCTCAAGGACATGCCAGCTGTTGCTTAATCGCTTTACCTGGCTCGAGTAGTAGCTTGTTCACAAATCAAAGATATTACTTATATGATGCAGTCAGCTGGGATTCTTACCTTTTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E350100" ref_strand="+" ref_description="SGN-E350100 [cTOS-4-H2]">
      <seq>aagtcagcgttgtttgggatgcctatacagcaactaaggatgcccatgctgtctgcatccttacagagtgggatgaatttaagtctctcgactataagaagatgtatgatagcatgcaaaaacctgcttttatatttgatggtaggaatgttgtggacgcggagaagcttagggagattggatttatagtctactcaattggtaagcctctggatgcttggctcaaggacatgccagctgttgcttaatcgctttacctggctcgagtagtagcttgttcacaaatcaaagatattacttatatgatgcagtcagctgggattcttaccttttttttttactacgttcagtttctgttttgttttatcccacttaggctgaaagaccattcatggtcactaccagactcttaatgtttcttttgtattgatgatatcacctttgtcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="59256" stop="58210"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58956" g_stop="58511" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="446" r_length="446" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="447" polyA_stop="456"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E350100" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>446</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E350100" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58956" e_stop="58511"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAGGATGCCCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTTTATATTTGATGGTAGGAATGTTGTGGACGCGGAGAAGCTTAGGGAGATTGGATTTATAGTCTACTCAATTGGTAAGCCTCTGGATGCTTGGCTCAAGGACATGCCAGCTGTTGCTTAATCGCTTTACCTGGCTCGAGTAGTAGCTTGTTCACAAATCAAAGATATTACTTATATGATGCAGTCAGCTGGGATTCTTACCTTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTC</genome_strand>
        <mrna_strand>AAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAGGATGCCCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTTTATATTTGATGGTAGGAATGTTGTGGACGCGGAGAAGCTTAGGGAGATTGGATTTATAGTCTACTCAATTGGTAAGCCTCTGGATGCTTGGCTCAAGGACATGCCAGCTGTTGCTTAATCGCTTTACCTGGCTCGAGTAGTAGCTTGTTCACAAATCAAAGATATTACTTATATGATGCAGTCAGCTGGGATTCTTACCTTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E324682" ref_strand="+" ref_description="SGN-E324682 [cTOC-8-E3]">
      <seq>tccagaaggatattctgaatctggtttacatttgtgagtgcaatggtcttccagaggtagctgaatactggaaacaggttatcaagatcaatgactatcagaagaatcgttttgtcaaccgcgttgttgcctccatgttcaacacagtatcaggcaagaaagtcgccattttaggtttcgctttcaagaaggatactggtgatactcgagagacccctgcaattgatgtttgcaagggactgctgggggacaaggctaatttgagcatatatgatcctcaagtgagtgaggaccaaattcagagagacctctcaatgaaaaagttcgattgggatcatcctcttcaccttcagccaatgagtccaacaaccgtgaaacaagtcagcgttgtttgggatgcctatacagcaactaaggatgcccatgctgtctgcatccttacagagtgggatgaatttaagtctctcgactataagaagatgtatgatagcatgcaaaaacctgcttttata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="59634" stop="58523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59334" g_stop="58823" g_length="512"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="512" r_length="512" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E324682" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E324682" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59334" e_stop="58823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAGAGACCCCTGCAATTGATGTTTGCAAGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATCCTCTTCACCTTCAGCCAATGAGTCCAACAACCGTGAAACAAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAGGATGCCCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTTTATA</genome_strand>
        <mrna_strand>TCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAGAGACCCCTGCAATTGATGTTTGCAAGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATCCTCTTCACCTTCAGCCAATGAGTCCAACAACCGTGAAACAAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAGGATGCCCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTTTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E290453" ref_strand="+" ref_description="SGN-E290453 [cLES-20-H2]">
      <seq>ggagcaaatgtctcacaggtagcgtatgctgttggaaaggactcgaggattggtcccaagttccttaatgccagtgttggttttggtggctcttgcttccagaaggatattctgaatctggtttacatttgtgagtgcaatggtcttccagaggtagctgaatactggaaacaggttatcaagatcaatgactatcagaagaatcgttttgtcaaccgcgttgttgcctccatgttcaacacagtatcaggcaagaaagtcgccattttaggtttcgctttcaagaaggatactggtgatactcgagagacccctgcaattgatgtttgcaagggactgctgggggacaaggctaatttgagcatatatgatcctcaagtgagtgaggaccaaattcagagagacctctcaatgaaaaagttcgattgggatcatcctcttcaccttcagccaatgagtccaacaaccgtgaaacaagtcagcgttgtttgggatgcctatacagcaactaaggatgcccatgctgtctgcatccttacagagtgggatgaatttaagtctctcgactataagaagatgtatgatagcatgcaaaaacctgcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="59731" stop="58527"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59431" g_stop="58827" g_length="605"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="605" r_length="605" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E290453" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>605</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E290453" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59431" e_stop="58827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAGAGACCCCTGCAATTGATGTTTGCAAGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATCCTCTTCACCTTCAGCCAATGAGTCCAACAACCGTGAAACAAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAGGATGCCCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTT</genome_strand>
        <mrna_strand>GGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAGAGACCCCTGCAATTGATGTTTGCAAGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATCCTCTTCACCTTCAGCCAATGAGTCCAACAACCGTGAAACAAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAGGATGCCCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E703330" ref_strand="+" ref_description="SGN-E703330 [FA21AG12]">
      <seq>cgactgttcctgtcaaaactgccgaggcaattgaaaagattttgacccacaacagcaagggcattaacttccagatcctctcaaaccctgagttccttgcagaagggaccgctatcgaagacctttttaaacctgacagggtcctaatcggaggtcgggaaactccaggggggcagaaggctatccaagcattgaaggatgtttatgcccaatgggtccctgaagaacgcatcctcaccaccaatttgtggtcagctgagctctcaaaattggctgccaatgcatttttggcacaaagaatctcttctgtgaatgccatgtcagctctttgtgaggctactggagcaaatgtctcacaggtagcgtatgctgttggaaaggactcgaggattggtcccaagttccttaatgccagtgttggttttggtggctcttgcttccagaaggatattctgaatctggtttacatttgtgagtgcaatggtcttccagaggtagctgaatactggaaacaggttatcaagatcaatgactatcagaagaatcgttttgtcaaccgcgttgttgcctccatgttcaacacagtatcaggcaagaaagtcgccattttaggtttcgctttcaagaaggatactggtgatactcgagagacccctgcaattgatgtttgcaagggactgctgggggacaaggctaatttgagcatatatgatcctcaagtgagtgaggaccaaattcagagagacctctcaatgaaaaagttcgattgggatcatcctcttcaccttcagccaatgagtccaacaaccgtgaaacaagtcagcgttgtttgggatgcctatacagcaactaaagatgcccatgctgtctgcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="60072" stop="58599"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59772" g_stop="58899" g_length="874"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="874" r_length="874" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E703330" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>874</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703330" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59772" e_stop="58899"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTCCAGATCCTCTCAAACCCTGAGTTCCTTGCAGAAGGGACCGCTATCGAAGACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGGGAAACTCCAGGGGGGCAGAAGGCTATCCAAGCATTGAAGGATGTTTATGCCCAATGGGTCCCTGAAGAACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAGAGACCCCTGCAATTGATGTTTGCAAGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATCCTCTTCACCTTCAGCCAATGAGTCCAACAACCGTGAAACAAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAGGATGCCCATGCTGTCTGCAT</genome_strand>
        <mrna_strand>CGACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTCCAGATCCTCTCAAACCCTGAGTTCCTTGCAGAAGGGACCGCTATCGAAGACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGGGAAACTCCAGGGGGGCAGAAGGCTATCCAAGCATTGAAGGATGTTTATGCCCAATGGGTCCCTGAAGAACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAGAGACCCCTGCAATTGATGTTTGCAAGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATCCTCTTCACCTTCAGCCAATGAGTCCAACAACCGTGAAACAAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAAGATGCCCATGCTGTCTGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E265971" ref_strand="+" ref_description="SGN-E265971 [cLEI-6-D15]">
      <seq>tcgaggattggtcccaagttccttaatgccagtgttggttttggtggctcttgcttccagaaggatattctgaatctggtttacatttgtgagtgcaatggtcttccagaggtagctgaatactggaaacaggttatcaagatcaatgactatcagaagaatcgttttgtcaaccgcgttgttgcctccatgttcaacacagtatcaggcaagaaagtcgccattttaggtttcgctttcaagaaggatactggtgatactcgagagacccctgcaattgatgtttgcaagggactgctgggggacaaggctaatttgagcatatatgatcctcaagtgagtgaggaccaaattcagagagacctctcaatgaaaaagttcgattgggatcatcctcttcacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="59689" stop="58686"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59389" g_stop="58986" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="404" r_length="404" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E265971" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265971" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59389" e_stop="58986"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAGAGACCCCTGCAATTGATGTTTGCAAGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATCCTCTTCACCT</genome_strand>
        <mrna_strand>TCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAGAGACCCCTGCAATTGATGTTTGCAAGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATCCTCTTCACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E310207" ref_strand="+" ref_description="SGN-E310207 [cLEZ-8-H8]">
      <seq>gatgtttatgcccaatgggtccctgaagaacgcatcctcaccaccaatttgtggtcagctgagctctcaaaattggctgccaatgcatttttggcacaaagaatctcttctgtgaatgccatgtcagctctttgtgaggctactggagcaaatgtctcacaggtagcgtatgctgttggaaaggactcgaggattggtcccaagttccttaatgccagtgttggttttggtggctcttgcttccagaaggatattctgaatctggtttacatttgtgagtgcaatggtcttccagaggtagctgaatactggaaacaggttatcaagatcaatgactatcagaagaatcgttttgtcaaccgcgttgttgcctccatgttcaacacagtatcaggcaagaaagtcgccattttaggtttcgctttcaagaaggatactggtgatactcgagagacccctgcaattgatgtttgcaagggactgctgggggacaaggctaatttgagcatatatgatcctcaagtgagtgaggaccaaattcagagagacctctcaatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="59875" stop="58716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59575" g_stop="59016" g_length="560"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="560" r_length="560" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E310207" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59575" e_stop="59016"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGTTTATGCCCAATGGGTCCCTGAAGAACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAGAGACCCCTGCAATTGATGTTTGCAAGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAA</genome_strand>
        <mrna_strand>GATGTTTATGCCCAATGGGTCCCTGAAGAACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAGAGACCCCTGCAATTGATGTTTGCAAGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E361518" ref_strand="+" ref_description="SGN-E361518 [cLPP-6-G24]">
      <seq>tcagctctctgtgaggctacaggagcaaacgtttcacaggtggcatatgctgttggtaaggactcgagaattggtcccaagttcctcaacgctagtgttggttttggtggatcttgcttccagaaggatattctgaacctggtttacatttgcgagtgcaatggtctgcctgaggttgctgaatactggaaacaagttatcaagattaatgactatcagaagagtcgttttgtcaatcgtgttgttgcctctatgttcaacacagtgtcaaacaagaaagttgcaattctaggttttgctttcaagaaggacactggcgatactcgagagacccctgcaattgatgtatgcaagggactagtgggggataatgctaaattgagcatatacgatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="59752" stop="58758"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59452" g_stop="59058" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="395" r_length="395" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E361518" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E361518" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59452" e_stop="59058"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAGAGACCCCTGCAATTGATGTTTGCAAGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCC</genome_strand>
        <mrna_strand>TCAGCTCTCTGTGAGGCTACAGGAGCAAACGTTTCACAGGTGGCATATGCTGTTGGTAAGGACTCGAGAATTGGTCCCAAGTTCCTCAACGCTAGTGTTGGTTTTGGTGGATCTTGCTTCCAGAAGGATATTCTGAACCTGGTTTACATTTGCGAGTGCAATGGTCTGCCTGAGGTTGCTGAATACTGGAAACAAGTTATCAAGATTAATGACTATCAGAAGAGTCGTTTTGTCAATCGTGTTGTTGCCTCTATGTTCAACACAGTGTCAAACAAGAAAGTTGCAATTCTAGGTTTTGCTTTCAAGAAGGACACTGGCGATACTCGAGAGACCCCTGCAATTGATGTATGCAAGGGACTAGTGGGGGATAATGCTAAATTGAGCATATACGATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E319519" ref_strand="+" ref_description="SGN-E319519 [cTOB-15-A16]">
      <seq>aacgcatcctcaccaccaatttgtggtcagctgagctctcaaaattggctgccaatgcatttttggcacaaagaatctcttctgtgaatgccatgtcagctctttgtgaggctactggagcaaatgtctcacaggtagcgtatgctgttggaaaggactcgaggattggtcccaagttccttaatgccagtgttggttttggtggctcttgcttccagaaggatattctgaatctggtttacatttgtgagtgcaatggtcttccagaggtagctgaatactggaaacaggttatcaagatcaatgactatcagaagaatcgttttgtcaaccgcgttgttgcctccatgttcaacacagtatcaggcaagaaagtcgccattttaggtttcgctttcaagaaggatactggtgatactcgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="59847" stop="58825"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59547" g_stop="59125" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="423" r_length="423" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E319519" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>423</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E319519" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59547" e_stop="59125"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAG</genome_strand>
        <mrna_strand>AACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E339309" ref_strand="+" ref_description="SGN-E339309 [cTOF-4-B20]">
      <seq>ctgcagatctaacttattgggagagtgcagctcgcatgatagctgatgtctcaaaatctgataagatagttgttgagaaatcaactgttcctgtcaaaactgccgaggcaattgaaaagattttgacccacaacagcaagggcattaacttccagatcctctcaaaccctgagttccttgcagaagggaccgctatcgaagacctttttaaacctgacagggtcctaatcggaggtcgggaaactccaggggggcagaaggctatccaagcattgaaggatgtttatgcccaatgggtccctgaagaacgcatcctcaccaccaatttgtggtcagctgagctctcaaaattggctgccaatgcatttttggcacaaagaatctcttctgtgaatgccatgtcagctctttgtgaggctactggagcaaatgtctcacaggtagcgtatgctgttggaaaggactcgaggattggtcccaagttccttaatgccagtgttggttttggtggctcttgcttccagaaggatattctgaatctggtttacatttgtgagtgcaatggtcttccagaggtagctgaatactggaaacaggttatcaagatcaatgactatcagaagaatcgttttgtcaacccgcgttgttgccttcatgttcaacacagtatcaggcaagaaagtcgcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="60153" stop="58867"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59853" g_stop="59167" g_length="687"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="688" r_length="688" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E339309" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E339309" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59853" e_stop="59167"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCAGATCTAACTTATTGGGAGAGTGCAGCTCGCATGATAGCTGATGTCTCAAAATCTGATAAGATAGTTGTTGAGAAATCAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTCCAGATCCTCTCAAACCCTGAGTTCCTTGCAGAAGGGACCGCTATCGAAGACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGGGAAACTCCAGGGGGGCAGAAGGCTATCCAAGCATTGAAGGATGTTTATGCCCAATGGGTCCCTGAAGAACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAA-CCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCA</genome_strand>
        <mrna_strand>CTGCAGATCTAACTTATTGGGAGAGTGCAGCTCGCATGATAGCTGATGTCTCAAAATCTGATAAGATAGTTGTTGAGAAATCAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTCCAGATCCTCTCAAACCCTGAGTTCCTTGCAGAAGGGACCGCTATCGAAGACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGGGAAACTCCAGGGGGGCAGAAGGCTATCCAAGCATTGAAGGATGTTTATGCCCAATGGGTCCCTGAAGAACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCCGCGTTGTTGCCTTCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E370821" ref_strand="+" ref_description="SGN-E370821 [TUS-27-D3](-)">
      <seq>cttgtttccagtattcagcaacctcaggcagaccattgcactcgcaaatgtaaaccaggttcagaatatccttctggaagcaagatccaccaaaaccaacacttgcgttgaggaacttgggaccaattctcgagtccttaccaacagcatatgccacctgtgaaacgtttgctcctgtagcctcacagagagctgacatggcattcacagaagagattctttgtgccaaaaatgcattggcagccaactttgagagctcagcggaccacaagttggtggtaatgatattggcttcagggacccaatgagcataaacatccttcaatgcttggatagccttctggcctcctggagtttcccggcctccaatcagaaccctgtcaggtttaaagaggtcgtcgattgcagtaccctctgcaagaaattcagggtttgagaggatctggaagttaattcccttgctgttgtgggtcaaaatcttttcaattgcctcagcagtttttactggaacagttgatttctcaacaactattttgtcagatttcgagacatcggcaatcatacgggctgcactctcccagtaggtaagatctgcagccttgcctgctccaagacccctagtcttggtaggagtgttgacagaaacaaaaactatatcagcctcgtgcacatgtttctccacatctgtgctgaagaagagattcttgcctcggcattgcttgacgagaactag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="58959" stop="60290"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59257" g_stop="59986" g_length="730"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="730" r_length="730" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E370821" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E370821" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59257" e_stop="59986"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGTTTCCAGTATTCAGCTACCTCTGGAAGACCATTGCACTCACAAATGTAAACCAGATTCAGAATATCCTTCTGGAAGCAAGAGCCACCAAAACCAACACTGGCATTAAGGAACTTGGGACCAATCCTCGAGTCCTTTCCAACAGCATACGCTACCTGTGAGACATTTGCTCCAGTAGCCTCACAAAGAGCTGACATGGCATTCACAGAAGAGATTCTTTGTGCCAAAAATGCATTGGCAGCCAATTTTGAGAGCTCAGCTGACCACAAATTGGTGGTGAGGATGCGTTCTTCAGGGACCCATTGGGCATAAACATCCTTCAATGCTTGGATAGCCTTCTGCCCCCCTGGAGTTTCCCGACCTCCGATTAGGACCCTGTCAGGTTTAAAAAGGTCTTCGATAGCGGTCCCTTCTGCAAGGAACTCAGGGTTTGAGAGGATCTGGAAGTTAATGCCCTTGCTGTTGTGGGTCAAAATCTTTTCAATTGCCTCGGCAGTTTTGACAGGAACAGTTGATTTCTCAACAACTATCTTATCAGATTTTGAGACATCAGCTATCATGCGAGCTGCACTCTCCCAATAAGTTAGATCTGCAGCCTTGCCTGCTCCGAGACCCCTTGTCTTGGTAGGAGTATTCACAGAAACAAAAACGATATCAGCCTCCCGCACATGTTTCTCCACATCTGTGCTGAAGAAGAGGTTCCTGCCTCGGCACTCCTTGACTATATC</genome_strand>
        <mrna_strand>CTTGTTTCCAGTATTCAGCAACCTCAGGCAGACCATTGCACTCGCAAATGTAAACCAGGTTCAGAATATCCTTCTGGAAGCAAGATCCACCAAAACCAACACTTGCGTTGAGGAACTTGGGACCAATTCTCGAGTCCTTACCAACAGCATATGCCACCTGTGAAACGTTTGCTCCTGTAGCCTCACAGAGAGCTGACATGGCATTCACAGAAGAGATTCTTTGTGCCAAAAATGCATTGGCAGCCAACTTTGAGAGCTCAGCGGACCACAAGTTGGTGGTAATGATATTGGCTTCAGGGACCCAATGAGCATAAACATCCTTCAATGCTTGGATAGCCTTCTGGCCTCCTGGAGTTTCCCGGCCTCCAATCAGAACCCTGTCAGGTTTAAAGAGGTCGTCGATTGCAGTACCCTCTGCAAGAAATTCAGGGTTTGAGAGGATCTGGAAGTTAATTCCCTTGCTGTTGTGGGTCAAAATCTTTTCAATTGCCTCAGCAGTTTTTACTGGAACAGTTGATTTCTCAACAACTATTTTGTCAGATTTCGAGACATCGGCAATCATACGGGCTGCACTCTCCCAGTAGGTAAGATCTGCAGCCTTGCCTGCTCCAAGACCCCTAGTCTTGGTAGGAGTGTTGACAGAAACAAAAACTATATCAGCCTCGTGCACATGTTTCTCCACATCTGTGCTGAAGAAGAGATTCTTGCCTCGGCATTGCTTGACGAGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E287502" ref_strand="+" ref_description="SGN-E287502 [cLES-9-I4]">
      <seq>gaaatcaactgttcctgtcaaaactgccgaggcaattgaaaagattttgacccacaacagcaagggcattaacttccagatcctctcaaaccctgagttccttgcagaagggaccgctatcgaagacctttttaaacctgacagggtcctaatcggaggtcgggaaactccaggggggcagaaggctatccaagcattgaaggatgtttatgcccaatgggtccctgaagaacgcatcctcaccaccaatttgtggtcagctgagctctcaaaattggctgccaatgcatttttggcacaaagaatctcttctgtgaatgccatgtcagctctttgagaggctactggagcaaatgtctcacaggtagcgtatgctgttggaaaggactcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="60077" stop="59086"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59777" g_stop="59386" g_length="392"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="392" r_length="392" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E287502" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>392</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E287502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59777" e_stop="59386"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATCAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTCCAGATCCTCTCAAACCCTGAGTTCCTTGCAGAAGGGACCGCTATCGAAGACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGGGAAACTCCAGGGGGGCAGAAGGCTATCCAAGCATTGAAGGATGTTTATGCCCAATGGGTCCCTGAAGAACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGA</genome_strand>
        <mrna_strand>GAAATCAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTCCAGATCCTCTCAAACCCTGAGTTCCTTGCAGAAGGGACCGCTATCGAAGACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGGGAAACTCCAGGGGGGCAGAAGGCTATCCAAGCATTGAAGGATGTTTATGCCCAATGGGTCCCTGAAGAACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGAGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E204355" ref_strand="+" ref_description="SGN-E204355 [cLEC-13-K10]">
      <seq>cagatcctctcaaaccctgagttccttgcagaagggaccgctatcgaagacctttttaaacctgacagggtcctaatcggaggtcgggaaactccaggggggcagaaggctatccaagcattgaaggatgtttatgcccaatgggtccctgaagaacgcatcctcaccaccaatttgtggtcagctgagctctcaaaattggctgccaatgcatttttggcacaaagaatctcttctgtgaatgccatgtcagctctttgtgaggctactggagcaaatgtctcacaggtagcgtatgctgttggaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="60001" stop="59093"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59701" g_stop="59393" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="309" r_length="309" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E204355" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>309</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204355" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59701" e_stop="59393"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGATCCTCTCAAACCCTGAGTTCCTTGCAGAAGGGACCGCTATCGAAGACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGGGAAACTCCAGGGGGGCAGAAGGCTATCCAAGCATTGAAGGATGTTTATGCCCAATGGGTCCCTGAAGAACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAG</genome_strand>
        <mrna_strand>CAGATCCTCTCAAACCCTGAGTTCCTTGCAGAAGGGACCGCTATCGAAGACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGGGAAACTCCAGGGGGGCAGAAGGCTATCCAAGCATTGAAGGATGTTTATGCCCAATGGGTCCCTGAAGAACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E325452" ref_strand="+" ref_description="SGN-E325452 [cTOC-1-N15]">
      <seq>gtgcgggaggctgatatcgtatttgtttgtgtgaatactcctaccaagacaaggggtgggggaggacgcaacgttgcagatctaacttattgggagagagcagcttgcatgataactgatgtctcaaaatctgataagatagttgtagagaaatcaactgtgcctgtcaaaactgccgaggcaattgaaaagattttgacccacaacagcaagggcattaacttccagatcctctcaaaccctgagttccttgcagaagggaccgctatcgaagacctttttaaacctgacagggtcctaatcggaggtcgtgaaactccaggggggcagaacgctatccaagcattgaaggatgtttatgcccaatgggtccctgaggagcgcatcctctccaccaatttgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="60226" stop="59222"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59926" g_stop="59522" g_length="405"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="405" r_length="405" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E325452" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>405</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E325452" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59926" e_stop="59522"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTACCAAGACAAGGGGTCTCGGAGCAGGCAAGGCTGCAGATCTAACTTATTGGGAGAGTGCAGCTCGCATGATAGCTGATGTCTCAAAATCTGATAAGATAGTTGTTGAGAAATCAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTCCAGATCCTCTCAAACCCTGAGTTCCTTGCAGAAGGGACCGCTATCGAAGACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGGGAAACTCCAGGGGGGCAGAAGGCTATCCAAGCATTGAAGGATGTTTATGCCCAATGGGTCCCTGAAGAACGCATCCTCACCACCAATTTGTGG</genome_strand>
        <mrna_strand>GTGCGGGAGGCTGATATCGTATTTGTTTGTGTGAATACTCCTACCAAGACAAGGGGTGGGGGAGGACGCAACGTTGCAGATCTAACTTATTGGGAGAGAGCAGCTTGCATGATAACTGATGTCTCAAAATCTGATAAGATAGTTGTAGAGAAATCAACTGTGCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTCCAGATCCTCTCAAACCCTGAGTTCCTTGCAGAAGGGACCGCTATCGAAGACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGTGAAACTCCAGGGGGGCAGAACGCTATCCAAGCATTGAAGGATGTTTATGCCCAATGGGTCCCTGAGGAGCGCATCCTCTCCACCAATTTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E724430" ref_strand="+" ref_description="SGN-E724430 [FC24AD05]">
      <seq>ctttttccagatccattttccctcttctctcgtgaaactacggtttgaaacaaaggaaaatggttaagatttgctgtataggagctggatatgttggggggcccaccatggctgtcatagcactcaaatgcccttctattgaagtggttgttgttgatatttctgtgcctcgtatcacagcctggaacagtgatacactccccatatatgagccaggcctctatgatatagtcaaggagtgccgaggcaggaacctcttcttcagcacagatgtggagaaacatgtgcgggaggctgatatcgtttttgtttctgtgaatactcctaccaagacaaggggtctcggagcaggcaaggctgcagatctaacttattgggagagtgcacctcgcatgatacctgatgtctcaaaatctgataagatagttgttgagaaatcaactgttcctgtcaaaactgccgaggcaattgaaaagattttgacccacaacagcaagggcattaacttccagatcctctcaaaccctgagttccttgcaaaagggaccgctatcaaaaacctttttaaacctgacagggtcctaatcggaggtcgggaaactccaggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="61662" stop="59301"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61362" g_stop="61320" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61319" i_stop="60168" i_length="1152">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.767" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60167" g_stop="59601" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="610" r_length="567" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E724430" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E724430" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61362" e_stop="61320"/>
          <exon e_start="60167" e_stop="59601"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTCCAGATCCATTTTCCCTCTTCTCTCGTGAAACTACGGGTACTCTTTCTCTTCACTCCATTTCTTATTGATTTTGCAGGTGAGTGATGATAATTTGCTTCATTCATTTTGTTATTGATTCACTTTCTCCTCAAGTTTTTTTCGAAGATGTGAATTTTGAGCGTTTTTTTGATTGTCGGTGTGCTTAGTCTTGATATGTAATCTTCGGTTTCCTGCGGAAATGCGTGGTTGATTGTTGTGATTTCTCTAGATCTAATGTTTGATTTGATAATTTATTGGTTGATTTGTGATATGAGTTGATCTGGTGAATGTCAGTGGAATTTTAGCTCAGAGCGAGAGGAGGACTCTGAATCTGACTGTTTTTTTATTTAGATCCGTTTAAGTTCATGATTAGTAAATGTAATTGCTTGTGGAATTTTGTTGTCCAATTAATGAAATTCTCACATTTCGTTTTGTTGATTGGTGCATATTTGATCGAATTCTCAAGTTATATGTAAACAGTACCATACGTGAATCTGTGAGTGTGGCTTATCAAGTAGAATAAACTATAAAGTAAAATGTACAGCAGGGGAGAGGCGAATCACTTGATAAGTGCACCATTTAGGCTTCTTGTAGTAAGCGTGTTTTAGAACATATTTGCATAAAATATCTAGTTTTATGGAGAGATCACGTGTTCGCATGCCCCATAATATGGCCTATAAGTTTACCCCTGTCGCAGTGCGTAGGCAACATGTGTTTCTGTTTAATTCCTTCTTTAGACTAAAACTTTATACTGTTGTTGTGCTAAAATACGTGAAAGCCTACTCCTTTATGATGTAATACATTTAGGGATTAAGAATGTAGATCTGGTGGTTGGTAGTTAGCTCATATTATGTATATGCTATCAGTTTTGGTTGTGGATATCACTGTAGGACTAGGACAAGCATTTGCTGAGCAGGGTCAGTGAATGGCAATATATAAAGACAGTCAATGAATCTACCAAGTGTACCTCGATACCAACGCTGGTCTATATGACTCCTCTACATTCTTTCTCCACTATTTGGGTCCATTTTGTTCCTCTATAAACACATTCAAACTTTTGTCAAAAATTTTGTGCATATTGCTCATTAGTCCTTACATTATGAGATGCCTTTATGTTGTGAGTAATACAGCCTCAAAATACATGGAGTCATGAACTTTTATATCTTGCAGTTTGGAACAAAGGAAAATGGTTAAGATTTGCTGTATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGTTGTTGATATTTCTGTGCCTCGTATCACAGCCTGGAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTCTTCTTCAGCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTACCAAGACAAGGGGTCTCGGAGCAGGCAAGGCTGCAGATCTAACTTATTGGGAGAGTGCAGCTCGCATGATAGCTGATGTCTCAAAATCTGATAAGATAGTTGTTGAGAAATCAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTCCAGATCCTCTCAAACCCTGAGTTCCTTGCAGAAGGGACCGCTATCGAAGACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGGGAAACTCCAGGGGG</genome_strand>
        <mrna_strand>CTTTTTCCAGATCCATTTTCCCTCTTCTCTCGTGAAACTACGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGAAACAAAGGAAAATGGTTAAGATTTGCTGTATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGTTGTTGATATTTCTGTGCCTCGTATCACAGCCTGGAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTCTTCTTCAGCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTACCAAGACAAGGGGTCTCGGAGCAGGCAAGGCTGCAGATCTAACTTATTGGGAGAGTGCACCTCGCATGATACCTGATGTCTCAAAATCTGATAAGATAGTTGTTGAGAAATCAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTCCAGATCCTCTCAAACCCTGAGTTCCTTGCAAAAGGGACCGCTATCAAAAACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGGGAAACTCCAGGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E339557" ref_strand="+" ref_description="SGN-E339557 [cTOE-16-I24]">
      <seq>gatccattttccctcttctctcgtgaaactacgggtactctttctcttcactccatttcttattgattttgcagtttggaacaaaggaaaatggttaagatttgctgtataggagctggatatgttggggggcccaccatggctgtcatagcactcaaatgcccttctattgaagtggttgttgttgatatttctgtgcctcgtatcacagcctggaacagtgatacactccccatatatgagccaggcctctatgatatagtcaaggagtgccgaggcaggaacctcttcttcagcacagatgtggagaaacatgtgcgggaggctgatatcgtttttgtttctgtgaatactcctaccaagacaaggggtctcggagcaggcaaggctgcagatctaacttattgggagagtgcagctcgcatgatagctgatgtctcaaaatctgataagatagttgttgagaaatcaactgttcctgtcaaaactgccgaggcaattgaaaagattttgacccacaacagcaagggcattaactttcagatcctctcaaaccctgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="61653" stop="59381"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61353" g_stop="61280" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61279" i_stop="60168" i_length="1112">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.767" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60167" g_stop="59681" g_length="487"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="561" r_length="487" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E339557" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E339557" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61353" e_stop="61280"/>
          <exon e_start="60167" e_stop="59681"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCCATTTTCCCTCTTCTCTCGTGAAACTACGGGTACTCTTTCTCTTCACTCCATTTCTTATTGATTTTGCAGGTGAGTGATGATAATTTGCTTCATTCATTTTGTTATTGATTCACTTTCTCCTCAAGTTTTTTTCGAAGATGTGAATTTTGAGCGTTTTTTTGATTGTCGGTGTGCTTAGTCTTGATATGTAATCTTCGGTTTCCTGCGGAAATGCGTGGTTGATTGTTGTGATTTCTCTAGATCTAATGTTTGATTTGATAATTTATTGGTTGATTTGTGATATGAGTTGATCTGGTGAATGTCAGTGGAATTTTAGCTCAGAGCGAGAGGAGGACTCTGAATCTGACTGTTTTTTTATTTAGATCCGTTTAAGTTCATGATTAGTAAATGTAATTGCTTGTGGAATTTTGTTGTCCAATTAATGAAATTCTCACATTTCGTTTTGTTGATTGGTGCATATTTGATCGAATTCTCAAGTTATATGTAAACAGTACCATACGTGAATCTGTGAGTGTGGCTTATCAAGTAGAATAAACTATAAAGTAAAATGTACAGCAGGGGAGAGGCGAATCACTTGATAAGTGCACCATTTAGGCTTCTTGTAGTAAGCGTGTTTTAGAACATATTTGCATAAAATATCTAGTTTTATGGAGAGATCACGTGTTCGCATGCCCCATAATATGGCCTATAAGTTTACCCCTGTCGCAGTGCGTAGGCAACATGTGTTTCTGTTTAATTCCTTCTTTAGACTAAAACTTTATACTGTTGTTGTGCTAAAATACGTGAAAGCCTACTCCTTTATGATGTAATACATTTAGGGATTAAGAATGTAGATCTGGTGGTTGGTAGTTAGCTCATATTATGTATATGCTATCAGTTTTGGTTGTGGATATCACTGTAGGACTAGGACAAGCATTTGCTGAGCAGGGTCAGTGAATGGCAATATATAAAGACAGTCAATGAATCTACCAAGTGTACCTCGATACCAACGCTGGTCTATATGACTCCTCTACATTCTTTCTCCACTATTTGGGTCCATTTTGTTCCTCTATAAACACATTCAAACTTTTGTCAAAAATTTTGTGCATATTGCTCATTAGTCCTTACATTATGAGATGCCTTTATGTTGTGAGTAATACAGCCTCAAAATACATGGAGTCATGAACTTTTATATCTTGCAGTTTGGAACAAAGGAAAATGGTTAAGATTTGCTGTATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGTTGTTGATATTTCTGTGCCTCGTATCACAGCCTGGAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTCTTCTTCAGCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTACCAAGACAAGGGGTCTCGGAGCAGGCAAGGCTGCAGATCTAACTTATTGGGAGAGTGCAGCTCGCATGATAGCTGATGTCTCAAAATCTGATAAGATAGTTGTTGAGAAATCAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTCCAGATCCTCTCAAACCCTGAG</genome_strand>
        <mrna_strand>GATCCATTTTCCCTCTTCTCTCGTGAAACTACGGGTACTCTTTCTCTTCACTCCATTTCTTATTGATTTTGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAACAAAGGAAAATGGTTAAGATTTGCTGTATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGTTGTTGATATTTCTGTGCCTCGTATCACAGCCTGGAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTCTTCTTCAGCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTACCAAGACAAGGGGTCTCGGAGCAGGCAAGGCTGCAGATCTAACTTATTGGGAGAGTGCAGCTCGCATGATAGCTGATGTCTCAAAATCTGATAAGATAGTTGTTGAGAAATCAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTTCAGATCCTCTCAAACCCTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E204663" ref_strand="+" ref_description="SGN-E204663 [cLEC-14-O20]">
      <seq>cctcttctctcgtgaaactacgggtactctttctcttcactccatttcttattgattttgcagtttggaacaaaggaaaatggttaagatttgctgtataggagctggatatgttggggggcccaccatggctgtcatagcactcaaatgcccttctattgaagtggttgttgttgatatttctgtgcctcgtatcacagcctggaacagtgatacactccccatatatgagccaggcctctatgatatagtcaaggagtgccgaggcaggaacctcttcttcagcacagatgtggagaaacatgtgcgggaggctgatatcgtttttgtttctgtgaatactcctaccaagacaaggggtctcggagcaggcaaggctgcagatctaacttattgggagagtgcagctcgcatgatagctgatgtctcaaaatctgataagatagttgttgagaaatcaactgttcctgtcaaaactgccgaggcaattgaaaagattttgacccacaacagcaagggca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="61642" stop="59410"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61342" g_stop="61280" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61279" i_stop="60168" i_length="1112">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.767" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60167" g_stop="59710" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="521" r_length="458" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E204663" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>521</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204663" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61342" e_stop="61280"/>
          <exon e_start="60167" e_stop="59710"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCTTCTCTCGTGAAACTACGGGTACTCTTTCTCTTCACTCCATTTCTTATTGATTTTGCAGGTGAGTGATGATAATTTGCTTCATTCATTTTGTTATTGATTCACTTTCTCCTCAAGTTTTTTTCGAAGATGTGAATTTTGAGCGTTTTTTTGATTGTCGGTGTGCTTAGTCTTGATATGTAATCTTCGGTTTCCTGCGGAAATGCGTGGTTGATTGTTGTGATTTCTCTAGATCTAATGTTTGATTTGATAATTTATTGGTTGATTTGTGATATGAGTTGATCTGGTGAATGTCAGTGGAATTTTAGCTCAGAGCGAGAGGAGGACTCTGAATCTGACTGTTTTTTTATTTAGATCCGTTTAAGTTCATGATTAGTAAATGTAATTGCTTGTGGAATTTTGTTGTCCAATTAATGAAATTCTCACATTTCGTTTTGTTGATTGGTGCATATTTGATCGAATTCTCAAGTTATATGTAAACAGTACCATACGTGAATCTGTGAGTGTGGCTTATCAAGTAGAATAAACTATAAAGTAAAATGTACAGCAGGGGAGAGGCGAATCACTTGATAAGTGCACCATTTAGGCTTCTTGTAGTAAGCGTGTTTTAGAACATATTTGCATAAAATATCTAGTTTTATGGAGAGATCACGTGTTCGCATGCCCCATAATATGGCCTATAAGTTTACCCCTGTCGCAGTGCGTAGGCAACATGTGTTTCTGTTTAATTCCTTCTTTAGACTAAAACTTTATACTGTTGTTGTGCTAAAATACGTGAAAGCCTACTCCTTTATGATGTAATACATTTAGGGATTAAGAATGTAGATCTGGTGGTTGGTAGTTAGCTCATATTATGTATATGCTATCAGTTTTGGTTGTGGATATCACTGTAGGACTAGGACAAGCATTTGCTGAGCAGGGTCAGTGAATGGCAATATATAAAGACAGTCAATGAATCTACCAAGTGTACCTCGATACCAACGCTGGTCTATATGACTCCTCTACATTCTTTCTCCACTATTTGGGTCCATTTTGTTCCTCTATAAACACATTCAAACTTTTGTCAAAAATTTTGTGCATATTGCTCATTAGTCCTTACATTATGAGATGCCTTTATGTTGTGAGTAATACAGCCTCAAAATACATGGAGTCATGAACTTTTATATCTTGCAGTTTGGAACAAAGGAAAATGGTTAAGATTTGCTGTATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGTTGTTGATATTTCTGTGCCTCGTATCACAGCCTGGAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTCTTCTTCAGCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTACCAAGACAAGGGGTCTCGGAGCAGGCAAGGCTGCAGATCTAACTTATTGGGAGAGTGCAGCTCGCATGATAGCTGATGTCTCAAAATCTGATAAGATAGTTGTTGAGAAATCAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCA</genome_strand>
        <mrna_strand>CCTCTTCTCTCGTGAAACTACGGGTACTCTTTCTCTTCACTCCATTTCTTATTGATTTTGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAACAAAGGAAAATGGTTAAGATTTGCTGTATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGTTGTTGATATTTCTGTGCCTCGTATCACAGCCTGGAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTCTTCTTCAGCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTACCAAGACAAGGGGTCTCGGAGCAGGCAAGGCTGCAGATCTAACTTATTGGGAGAGTGCAGCTCGCATGATAGCTGATGTCTCAAAATCTGATAAGATAGTTGTTGAGAAATCAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E293762" ref_strand="+" ref_description="SGN-E293762 [cLET-21-H18]">
      <seq>cgggtactctttctcttcactccatttcttattgattttgcagtttggaacaaaggaaaatggttaagatttgctgtataggagctggatatgttggggggcccaccatggctgtcatagcactcaaatgcccttctattgaagtggttgttgttgatatttctgtgcctcgtatcacagcctggaacagtgatacactccccatatatgagccaggcctctatgatatagtcaaggagtgccgaggcaggaacctcttcttcagcacagatgtggagaaacatgtgcgggaggctgatatcgtttttgtttctgtgaatactcctaccaagacaaggggtctcggagcaggcaaggctgcagatctaacttattgggagagtgcagctcgcatgatagctgatgtctcaaaatctgataagatagttgttgagaaatcaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="61622" stop="59469"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61322" g_stop="61280" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61279" i_stop="60168" i_length="1112">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.767" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60167" g_stop="59769" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="442" r_length="399" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E293762" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E293762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61322" e_stop="61280"/>
          <exon e_start="60167" e_stop="59769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGGTACTCTTTCTCTTCACTCCATTTCTTATTGATTTTGCAGGTGAGTGATGATAATTTGCTTCATTCATTTTGTTATTGATTCACTTTCTCCTCAAGTTTTTTTCGAAGATGTGAATTTTGAGCGTTTTTTTGATTGTCGGTGTGCTTAGTCTTGATATGTAATCTTCGGTTTCCTGCGGAAATGCGTGGTTGATTGTTGTGATTTCTCTAGATCTAATGTTTGATTTGATAATTTATTGGTTGATTTGTGATATGAGTTGATCTGGTGAATGTCAGTGGAATTTTAGCTCAGAGCGAGAGGAGGACTCTGAATCTGACTGTTTTTTTATTTAGATCCGTTTAAGTTCATGATTAGTAAATGTAATTGCTTGTGGAATTTTGTTGTCCAATTAATGAAATTCTCACATTTCGTTTTGTTGATTGGTGCATATTTGATCGAATTCTCAAGTTATATGTAAACAGTACCATACGTGAATCTGTGAGTGTGGCTTATCAAGTAGAATAAACTATAAAGTAAAATGTACAGCAGGGGAGAGGCGAATCACTTGATAAGTGCACCATTTAGGCTTCTTGTAGTAAGCGTGTTTTAGAACATATTTGCATAAAATATCTAGTTTTATGGAGAGATCACGTGTTCGCATGCCCCATAATATGGCCTATAAGTTTACCCCTGTCGCAGTGCGTAGGCAACATGTGTTTCTGTTTAATTCCTTCTTTAGACTAAAACTTTATACTGTTGTTGTGCTAAAATACGTGAAAGCCTACTCCTTTATGATGTAATACATTTAGGGATTAAGAATGTAGATCTGGTGGTTGGTAGTTAGCTCATATTATGTATATGCTATCAGTTTTGGTTGTGGATATCACTGTAGGACTAGGACAAGCATTTGCTGAGCAGGGTCAGTGAATGGCAATATATAAAGACAGTCAATGAATCTACCAAGTGTACCTCGATACCAACGCTGGTCTATATGACTCCTCTACATTCTTTCTCCACTATTTGGGTCCATTTTGTTCCTCTATAAACACATTCAAACTTTTGTCAAAAATTTTGTGCATATTGCTCATTAGTCCTTACATTATGAGATGCCTTTATGTTGTGAGTAATACAGCCTCAAAATACATGGAGTCATGAACTTTTATATCTTGCAGTTTGGAACAAAGGAAAATGGTTAAGATTTGCTGTATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGTTGTTGATATTTCTGTGCCTCGTATCACAGCCTGGAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTCTTCTTCAGCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTACCAAGACAAGGGGTCTCGGAGCAGGCAAGGCTGCAGATCTAACTTATTGGGAGAGTGCAGCTCGCATGATAGCTGATGTCTCAAAATCTGATAAGATAGTTGTTGAGAAATCAAC</genome_strand>
        <mrna_strand>CGGGTACTCTTTCTCTTCACTCCATTTCTTATTGATTTTGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAACAAAGGAAAATGGTTAAGATTTGCTGTATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGTTGTTGATATTTCTGTGCCTCGTATCACAGCCTGGAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTCTTCTTCAGCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTACCAAGACAAGGGGTCTCGGAGCAGGCAAGGCTGCAGATCTAACTTATTGGGAGAGTGCAGCTCGCATGATAGCTGATGTCTCAAAATCTGATAAGATAGTTGTTGAGAAATCAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E284723" ref_strand="+" ref_description="SGN-E284723 [cLES-3-L18]">
      <seq>ttccctcttctctcgtgaaactacgggtactctttctcttcactccatttcttattgattttgcagtttggaacaaaggaaaatggataagatttgctggataggagctggatatgttggggggcccaccatggctgtcatagcactcaaatgcccttctattgaagtggttggtggtgatatttctgtgcctcgtatcacagcctgtaacagtgatacactccccatatatgagccaggcctctatgatatagtcaaggagtgccgaggcaggaacctattcttcaccacagatgtggagaaacatgtgcgggaggctgatatcgattttgtttctgtgaatactcctaccaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="61645" stop="59578"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61345" g_stop="61280" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61279" i_stop="60168" i_length="1112">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.767" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60167" g_stop="59878" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="356" r_length="290" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E284723" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>356</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E284723" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61345" e_stop="61280"/>
          <exon e_start="60167" e_stop="59878"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCCTCTTCTCTCGTGAAACTACGGGTACTCTTTCTCTTCACTCCATTTCTTATTGATTTTGCAGGTGAGTGATGATAATTTGCTTCATTCATTTTGTTATTGATTCACTTTCTCCTCAAGTTTTTTTCGAAGATGTGAATTTTGAGCGTTTTTTTGATTGTCGGTGTGCTTAGTCTTGATATGTAATCTTCGGTTTCCTGCGGAAATGCGTGGTTGATTGTTGTGATTTCTCTAGATCTAATGTTTGATTTGATAATTTATTGGTTGATTTGTGATATGAGTTGATCTGGTGAATGTCAGTGGAATTTTAGCTCAGAGCGAGAGGAGGACTCTGAATCTGACTGTTTTTTTATTTAGATCCGTTTAAGTTCATGATTAGTAAATGTAATTGCTTGTGGAATTTTGTTGTCCAATTAATGAAATTCTCACATTTCGTTTTGTTGATTGGTGCATATTTGATCGAATTCTCAAGTTATATGTAAACAGTACCATACGTGAATCTGTGAGTGTGGCTTATCAAGTAGAATAAACTATAAAGTAAAATGTACAGCAGGGGAGAGGCGAATCACTTGATAAGTGCACCATTTAGGCTTCTTGTAGTAAGCGTGTTTTAGAACATATTTGCATAAAATATCTAGTTTTATGGAGAGATCACGTGTTCGCATGCCCCATAATATGGCCTATAAGTTTACCCCTGTCGCAGTGCGTAGGCAACATGTGTTTCTGTTTAATTCCTTCTTTAGACTAAAACTTTATACTGTTGTTGTGCTAAAATACGTGAAAGCCTACTCCTTTATGATGTAATACATTTAGGGATTAAGAATGTAGATCTGGTGGTTGGTAGTTAGCTCATATTATGTATATGCTATCAGTTTTGGTTGTGGATATCACTGTAGGACTAGGACAAGCATTTGCTGAGCAGGGTCAGTGAATGGCAATATATAAAGACAGTCAATGAATCTACCAAGTGTACCTCGATACCAACGCTGGTCTATATGACTCCTCTACATTCTTTCTCCACTATTTGGGTCCATTTTGTTCCTCTATAAACACATTCAAACTTTTGTCAAAAATTTTGTGCATATTGCTCATTAGTCCTTACATTATGAGATGCCTTTATGTTGTGAGTAATACAGCCTCAAAATACATGGAGTCATGAACTTTTATATCTTGCAGTTTGGAACAAAGGAAAATGGTTAAGATTTGCTGTATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGTTGTTGATATTTCTGTGCCTCGTATCACAGCCTGGAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTCTTCTTCAGCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTACCAAGA</genome_strand>
        <mrna_strand>TTCCCTCTTCTCTCGTGAAACTACGGGTACTCTTTCTCTTCACTCCATTTCTTATTGATTTTGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAACAAAGGAAAATGGATAAGATTTGCTGGATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGGTGGTGATATTTCTGTGCCTCGTATCACAGCCTGTAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTATTCTTCACCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGATTTTGTTTCTGTGAATACTCCTACCAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E322179" ref_strand="+" ref_description="SGN-E322179 [cTOB-24-O6]">
      <seq>ttagatctaagatttgacaccaaaacagactatttaagaatgtccccgccttcttagctctcataattctcttcatctttttccagatccattttccctcttctctcgtgaaactacgggtactctttctcttcactccatttcttattgattttgcagtttggaacaaaggaaaatggttaagatttgctgtataggagctggatatgttggggggcccaccatggctgtcatagcactcaaatgcccttctattgaagtggttgttgttgatatttctgtgcctcgtatcacagcctggaacagtgatacactccccatatatgagccaggcctctatgatatagtcaaggagtgccgaggcaggaacctcttcttcagcacagatgtggagaaacatgtgcgggaggctgatatcgtttttgtttctgtgaatactcctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="61738" stop="59583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61438" g_stop="61280" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="159" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61279" i_stop="60168" i_length="1112">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.767" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60167" g_stop="59883" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="444" r_length="285" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E322179" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>444</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E322179" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61438" e_stop="61280"/>
          <exon e_start="60167" e_stop="59883"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGATCTAAGATTTGACACCAAAACAGACTATTTAAGAATGTCCCCGCCTTCTTAGCTCTCATAATTCTCTTCATCTTTTTCCAGATCCATTTTCCCTCTTCTCTCGTGAAACTACGGGTACTCTTTCTCTTCACTCCATTTCTTATTGATTTTGCAGGTGAGTGATGATAATTTGCTTCATTCATTTTGTTATTGATTCACTTTCTCCTCAAGTTTTTTTCGAAGATGTGAATTTTGAGCGTTTTTTTGATTGTCGGTGTGCTTAGTCTTGATATGTAATCTTCGGTTTCCTGCGGAAATGCGTGGTTGATTGTTGTGATTTCTCTAGATCTAATGTTTGATTTGATAATTTATTGGTTGATTTGTGATATGAGTTGATCTGGTGAATGTCAGTGGAATTTTAGCTCAGAGCGAGAGGAGGACTCTGAATCTGACTGTTTTTTTATTTAGATCCGTTTAAGTTCATGATTAGTAAATGTAATTGCTTGTGGAATTTTGTTGTCCAATTAATGAAATTCTCACATTTCGTTTTGTTGATTGGTGCATATTTGATCGAATTCTCAAGTTATATGTAAACAGTACCATACGTGAATCTGTGAGTGTGGCTTATCAAGTAGAATAAACTATAAAGTAAAATGTACAGCAGGGGAGAGGCGAATCACTTGATAAGTGCACCATTTAGGCTTCTTGTAGTAAGCGTGTTTTAGAACATATTTGCATAAAATATCTAGTTTTATGGAGAGATCACGTGTTCGCATGCCCCATAATATGGCCTATAAGTTTACCCCTGTCGCAGTGCGTAGGCAACATGTGTTTCTGTTTAATTCCTTCTTTAGACTAAAACTTTATACTGTTGTTGTGCTAAAATACGTGAAAGCCTACTCCTTTATGATGTAATACATTTAGGGATTAAGAATGTAGATCTGGTGGTTGGTAGTTAGCTCATATTATGTATATGCTATCAGTTTTGGTTGTGGATATCACTGTAGGACTAGGACAAGCATTTGCTGAGCAGGGTCAGTGAATGGCAATATATAAAGACAGTCAATGAATCTACCAAGTGTACCTCGATACCAACGCTGGTCTATATGACTCCTCTACATTCTTTCTCCACTATTTGGGTCCATTTTGTTCCTCTATAAACACATTCAAACTTTTGTCAAAAATTTTGTGCATATTGCTCATTAGTCCTTACATTATGAGATGCCTTTATGTTGTGAGTAATACAGCCTCAAAATACATGGAGTCATGAACTTTTATATCTTGCAGTTTGGAACAAAGGAAAATGGTTAAGATTTGCTGTATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGTTGTTGATATTTCTGTGCCTCGTATCACAGCCTGGAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTCTTCTTCAGCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTAC</genome_strand>
        <mrna_strand>TTAGATCTAAGATTTGACACCAAAACAGACTATTTAAGAATGTCCCCGCCTTCTTAGCTCTCATAATTCTCTTCATCTTTTTCCAGATCCATTTTCCCTCTTCTCTCGTGAAACTACGGGTACTCTTTCTCTTCACTCCATTTCTTATTGATTTTGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGAACAAAGGAAAATGGTTAAGATTTGCTGTATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGTTGTTGATATTTCTGTGCCTCGTATCACAGCCTGGAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTCTTCTTCAGCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E703535" ref_strand="+" ref_description="SGN-E703535 [FA21DB04]">
      <seq>gaagggtgtggagaatgtagaggcaaccacgaagcctgagagagtaaaaaagggtccgagtagaagtgcccggaaacaatatgctaaaaggcaatggttgcgagaaatggtcaaaatttataagaatgtagcttctgaagcagagggacttaaggaactgcaggctaatggtggaagaagagctggtaaattacacccaaagtggcttgttaatggtgagactgatggcaaaccaatggcacgtaggaactggaagcagcaacaaagcaaaactgaatatcaagaggtgaatggccaaccaaaaggactactgcactggaagaaattgcgggaagaagataagggtagagatacgaacaaacaagatcaggcgaatgaaaaaagcaccttctgtggagaaccaggacaacacaatgatatggaggctgaaactattccagatcaagctttgcagcatgatcaagtgcaagagatagtttttccgtcaattcatgaagtttgccttgtcaaaaatggtaattcagactctgtagcaggacttcctgccacaaacaaatcaaatccagtccttaaggctgctaaaaagaaaactaatggcccagctatagaaaaaggagtaaacctctgggaacaacacagtgagaccatcaacgcggagaaggaacagttacatgaagaaagtagctggggtacgtggagctctgcgaagaagagctcatggtcagagagagccttgaaaggcagtgctcgtggtcctacaatggcctttcgaagatataaaagatgaaatatgagatgaaagcaacttgtatatatttgtgtccttactctcacaatgaagtcaacgaactccgttttgtaggtatctaggggaaactttgttgcttatagtagcagcaagttagtgttacctaagtttatctggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="70991" stop="78204"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71291" g_stop="71342" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71343" i_stop="75331" i_length="3989">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.733" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75332" g_stop="75430" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="151" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75431" i_stop="75561" i_length="131">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75562" g_stop="75654" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="244" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75655" i_stop="75737" i_length="83">
            <donor d_prob="0.342" d_score="1.00"/>
            <acceptor a_prob="0.488" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75738" g_stop="75803" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="310" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="75804" i_stop="75884" i_length="81">
            <donor d_prob="0.895" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="75885" g_stop="76014" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="440" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="76015" i_stop="76236" i_length="222">
            <donor d_prob="0.820" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="76237" g_stop="76268" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="472" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="76269" i_stop="77207" i_length="939">
            <donor d_prob="0.988" d_score="0.00"/>
            <acceptor a_prob="0.827" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="77208" g_stop="77343" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="608" r_length="136" r_score="0.993"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="77344" i_stop="77584" i_length="241">
            <donor d_prob="0.926" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="77585" g_stop="77904" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="609" r_stop="927" r_length="319" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E703535" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>928</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E703535" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71291" e_stop="71342"/>
          <exon e_start="75332" e_stop="75430"/>
          <exon e_start="75562" e_stop="75654"/>
          <exon e_start="75738" e_stop="75803"/>
          <exon e_start="75885" e_stop="76014"/>
          <exon e_start="76237" e_stop="76268"/>
          <exon e_start="77208" e_stop="77343"/>
          <exon e_start="77585" e_stop="77904"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGGGTGTGGAGAATGTAGAGGCAACCACGAAGCCTGAGAGAGTAAAAAAGGTCCATTTCTACAACTTTTCTCATACATTTCTTTGAGAAATTGACAACAAATAATCCTACAGTTGGTGGAGCTATTTCAGAAAATTGCGTGAAACTGTGTAGATTAATACTGCATCTGCACTGTATTAGAAGTGTTACGTAAAAGTGACATTTGTTCTTGTCATAAAGTCATCTGACATGATCAGACGCTATTGTGCATTGTTAGATCTGTTGGTTACTATAGTTTTTGATGAAGCTAGTGGTTTCATTGATGGCATCTAGAAGATGCAAAATTACAAACGATATTGCATCCAAAGATAAAACTGAGATAACTCTATAGCAAAAGCAGTCTACTCTAGAATCAAGGAGCTAACAGAGATCAAAAAGTTGTCATGAAAATTAACAGGGAACAAATTGTGTCAGTTAGACAGAAACATTAAGCACCTAGCCTTTATAGATTGATTGGGAGTTGATGTACCATCAAAACATCACTATCTCTCCGTCCACAAAACCCAAAAAATGCTAGCAGGGATCTCCAAATCTTCCTGATGGCTCTGTAAACTTTCCATGTGCGCTAATTTTCAAAGGCTTCCTTAGTATTCTGAGGCATGACCCAACTAGTCCAAAAATAGGGAAGACCATACTCCATAAATCTGTTGCAACTGTGGAAATTTTCAACAATCATTTTTCCCACATCTTTCTTTTCAACTATTTTTAATAAAAAAAATAAAATAAATCTGTAGCAACTGTGCCGTGTAGAAACAAATGATTGTTGATCTCTACACTATTATATGACACATGTAGCATCTATTAATAATTTGGACTTTTCTTTTCCTTTAGTCCTCGTATGTGAGGCATGCTTCCTGTAGTGCAATCCAACAAAAACATATGATTTTTGGGGGTAATTGGTCCTCCAAATTAGCTTCCATGGCCAGCTAGTAACCTCCTTTGACAGAATAGCTCCCTTCCTTAGAGCTTTCCCACTTCAACTGGTCCACATTCTGGGCATTCACTGGACAGGTTTCTAGTCTTGACAAGAGGCTCAGCAGATATTCAAACTCCCATTCTTGCATATTTCTTCTGAATTGGATGCTCCAAGTATTGTTTTCTCTATATCGGAATATGGTAGAGGTAGGATCACATGATACGATAGAGGCTTGGGTAATCCTCCTTTACCATACTATTCCCAAGCCACTTTTCCTCCCATAATTTGATGTGTATGTCCTGATTGAATTCATCCCAGAGTGGAGCTCTGGAAAGCATAGTAGTGACTATGAATCCATGCTTGGCTTTGATTATCTCTTTCCATAGTGTGCCTTCTTGTGCACATCTCCATAGCCATTTCACTAGTAAGCTCTTGTTATGTGTTAGCCAAATCTTTGATACCCAGGTCACCCTATAGCTTAGGCATAGTGCATTTAGACCACTTAACCAGGTGGACTTTGTGGCGCTTGTTTCCCTGCCACAAGAAGTCCCTTCTGATTTTGTGTAATTGCTTTACAATCTCTTTTGGAATAGGGAATGATGACATCAGGTATGTTGGGATGCTATCTAGTGTACTATTGATAAGTGTGAGCCTTCCACCCATTCAAAAATACTGCAACTGCCATGAGGTTAGTTTCCTTTCAAACTCTCAACCACTCCACTCCAGGAGTTTTCAACTTTGAATTTTGCACCTAGTGGTAGGCCCAAATAGGAGGTTGGGATAGATCCAGTATTACAACAAACGACTTCTGCTAGATTTCCTAGGTTGGGTACCTGATTAACAGAATATTAAGATTTTTGAGCAAGTAGATCTGTACATGTGTAGTCCTGATGGAACCTCAAAAATGAGCAGAGTGATGTTCAGGTAGAAACCTGGTTAGTATCACCCGACAGAATAATAGTGTATCATTGGCATACAGTATGTCGGAGATATTGACTGAACCCTGGACTTCTTCCCACATCAAAGTCATTAAGCCAGTGCAGTTTCTTGGATCCAACAGTCTGCTAAAGCGTCCATGGAAGTATGAAAAGAAATGGTGATGGTGGATCACCTTTCCACAGGCCTTTCACTGTCATGATGCTGAATTCGATCCATCTGATCCACCTCTCGAAATCCCATTTTTCTTAGCAAAGCAATTAGATATGACCAATTCAGTTGTCGAAAGCTTTCTCAATGTCTAGTTTGAAAATTATTCCTGCTTCTCCACTTTTTAGCTTCCACTCCAGCAGTTCATTAGCATTGAGTGCAGGATCAGTGATCTGGCTATTTTTTATGAAGGCATTCTGATGGTTAGAGACTATTTTCCCCGTGACAATTTTGAGCCTTTCAGCAAGAACTTTGGCTGCAATTTGGTATATGCTGACAACTAATTGGCATGTAATCTCTTAGTTCGGTTGCTTCTTTCTTCTTAGGAACTTGAGCTATAAAAGGTGCATTTGTCCACCTAATCATGGGGCACTGTTGATGAAAGTGATTGAGGGCATTCATTATGTCAACTTTGATAAACTCCCAAGCCTTCTGATAGAATGCCATAGTATACTCATCAGGCCGAGGGGGGTTGTCAGGAGCACATGATTTGATCACAGTCGGTAATTCATTCTTTGTAAAAGCCAATTCAGGGCTAACTTTCTCCTATTCTGAAATGCTTTCTAAGCCCGAAAATCAGGACTTGGTATCCAGTTTTCATGTTCTGTGTATAAGTCATAGAATTTCAAGATTTCCCTTTTGATAGTCTGTATCTTCATTGCATCACCTACTCTGAGCTTGTCAATACAGTTGCCCCTCCTGTGAGAATTAGCCATCTTCTGGAAGTACATTGTGTTACTGTCTCCTCCTTTCGACCACAAACATCTTGAATTTTGCCTCCATGAGGTTTCCACAGCTTTGACCAGGTGCTGATATTGCAGTTTTAGAGCCAGTAGCCTAGCCCTCTCTGTTGATGAAGGGGTGTGGTTTCTGCCATCTGTTCCACCGCAGAGAGTTCAACTAGAATTCTCCTAATTTGGTTTCTACCTTGCCATAGACCTCTTTATTACAGTTTGTGATGTCCCTTTCGAGATTCTTCTGCTCTTGAACAAGTATGAAGTCGGGATTGCCATTAACTCTGTAACTTTGCCACCATTCCTTTGCTTTATCAAGGAAGCCCTCAGCCTTTAGCCACATGTTTTCGAATTTAAAATAAGAATGGCCCGTCTCCCAATCACCATTCTCTAGTATCAAAGGTCTGGGTCTTGATAAAACCATCGGGAGAGCTACCTACTTAATTAAGTTAAAGCTATCATTCCATTCATACGAGAACAAGATTCTATCGATTCTGGAGGCTCGTATGTGTGCTTCACCTCAGGACCAAGTGAAAGTGGCATCCTCTAATGGCAGATCAATCAAAACCAGATCTTGTATTAATGCTGAGAAATCTCTCATGGGTTTTGTTCTCCTTGTACAATTTAACCTCTCGTTTTCATGTCTGAATACGTTAAAGTCACCCGGAAGACCCAATGGTCCTCCATAATCCCCTTATACCTATTTCATGCTATGATAATTCTCTCTCAGGATTGGTGTGTGGGCCATATATCCCAGTGGAAAACCAACTAAAATCCTCTTGAAGGGATTCTGGCATACATGCGATAGAATAAGAGCCTTGGTAGATCTCTGTACATCGCCATTGGCACTTGTCCCACAGCACTATCATCCCTCCCCTTGTGCCACTGGGTTTTAACTCTGCCCAATCAGCCCACCTATTGCCCCCCATATATGATGAATAAGTGTAGTTGACCAGTCTTCTACTTTCATCTCCTGTAAACATATTATGTCAGCCTTCCATTTATGAATCAGACATTTGAATTTAGCTTCTTGAGGGGAGAAATTTGTTGGGGTATTTCACAAGTTATATTCTCTTACTCATATGACCAGTTACCTGTGTTACAAATAGCTTCCATTATATTTCACTGTCAATCGTATTTTTCATTTTTCCTTCAGAAGATTTGCCTAAAGATCTTGTAGTGCTCAGATGTTGATTCTCTCTCAGGGTCCGAGTAGAAGTGCCCGGAAACAATATGCTAAAAGGCAATGGTTGCGAGAAATGGTCAAAATTTATAAGAATGTAGCTTCTGAAGCAGAGGGACTTGTAAGTTAATTATAAGATGTAGATATTTGCGTCTCTTTTTAGTTCTCAAAAAAATTATAAGATGTAAATATGCCAACTGTTGTTTCCACGGTATGTTATATTTGAGCGCAAAAATTTTGCTGCGAAAATAGAAGGAACTGCAGGCTAATGGTGGAAGAAGAGCTGGTAAATTACACCCAAAGTGGCTTGTTAATGGTGAGACTGATGGCAAACCAATGGCACGTGTGAGTAGTGAGATGTCGAGAAGTACTTCTTGCCTTTGCTTCTGAATCATGTATCAAAAACTTATATGATAAAGACTTTGCAGAGGAACTGGAAGCAGCAACAAAGCAAAACTGAATATCAAGAGGTGAATGGCCAACCAAAAGGACTAGTGAGTAATCAGACTTGAACAAATGTTTTAATTCTTCTGCATAGTCTCATTTCTGTTGATAAAGTAGTGTCCCACATGTAGCTGCACTGGAAGAAATTGCGGGAAGAAGATAAGGGTAGAGATACGAACAAACAAGATCAGGCGAATGAAAAAAGCACCTTCTGTGGAGAACCAGGACAACACAATGATATGGAGGCTGAAACTATTCCAGGTTTTTTTTTAATGATTCAGCTGTCCTCCACTTTTCAGGGGGAGGACTTTTGGATGCTATTCTTCTTCCTACCAGTTCTTAAAATATTAATCCAAATCTAACCGCTTTTTTTGCCATAGTTTCAGTTTTGCATTCTTTATGGAAGAACTCTGGTTATCAATAAAAATAAAAATATGGAAGAACTATAGAGTCTTGAGTTTTTTCTTTTTTGATTTAATGCAGATCAAGCTTTGCAGCATGATCAAGTGCAAGAGGTAGGTTCGGCTATAGTTTGTATCATAATGTTCTTGCAATTAAATTCTTTTGAATTTTTTAAGAGTTTTAGGTACCAAAAGTAGAGTTGTCAAGTAAAAATTTGTCTTGAATGTCATTTTGAGATTTGTATTGAAGCTTAACAATTTGAGATGCTAATACAAGGAGTAAACAGATATCGTTAATGATATGTGGGCTATTTGGTTATAAATCAATAAAAGATGTTTCGAAAGAAAAAAGCACCAACTCTCTTTCATGAAGGACAGATGATTAGTTTTAAATTGCACCATAAAAGCATCGATGTGTGGAGAAGAAACCTCATTGAAGCTGGTCATAAATGACATGTAAGATACCTCATGTATATAGAAGTTTATGCCACAGGATATAAAAAATTTATAAAATTACGATTATATCCAGTTTTTTGTTATAAATCACATCGAGATAACTCCATTTTGTAAGGAAGATGGATCACACGAGTTACTTGAGCTGAGTGAAATTGAATTTACATCCTGTCTGAGTGGATGTCACTGATTGGAATTTTGAACCCAAATTTGAGGAAGTCTAGGTTCAGTGATATTTTTATGTTCAATTAAGTCCAAAAGTTTCTCTTTAGTACAGGACATGTGTCATCTCTTGAGATGGTTTGTTAGCTAGTGGGGTATCATAGAGTATTGTTGTATATCCTGATTCTATAGTATATCAGTGCAGTCTCAGATGGAGATATTGATTGAATGAAAAGTTATTTTAATTCTTATTTCTCTTTGATTCCTCTTTGTTCTAGTTTATGGCGTTCCCCAGTTGGGAATCGCTAGAGTGGATTTCTCTGTGTCGTGTTTTTGCACTTTAGTTACAAATAGTCAGATATTCAACTTCTGCTTGTAATGCTAATTGCAGAGGCCTTCTTGCGACAACTTGGAATAATAAATTGCATCTTCTTGCAGATAGTTTTTCCGTCAATTGATGAAGTTTGCCTTGTCAAAAATGGTAATTCAGACTCTGTAGCAGGACTTCCTGCCACAAACAAATCAAATCCAGTCCTTAAGGCTGCTAAAAAGAAAACTAATGGCCCAGCTATAGGTAATTATCGTTGTTATTGCACTGGCTATGTGGTGGAGTTAGTTGGAGGAGATTTCATTAGATCAACGTTAATTTTCCTTTCCATTTGAGTCATTATAATTTGACTGTTTGTGGAAATGAACCATGGAAACCAAACACATTCTGGTCTTAAAGGTGTGAGATGATGCTTTTTGTTAACTCCTTGACGATTAGTCATTACTGTGCGTTGAATTTCATAACTAGGTATTCATGTTATTTGCAGAAAAAGGAGTAAACCTCTGGGAACAACACAGTGAGACCATCAACGCGGAGAAGGAACAGTTACATGAAGAAAGTAGCTGGGGTACGTGGAGCTCTGCGAAGAAGAGCTCATGGTCAGAGAGAACCTTGAAAGGCAGTGCTCGTGGTCCTACAATGGCCTTTCGAAGATATAAAAGATGAAATATGAGATGAAGCAAACTTGTATATA-TTGTGTTCCTTACTCTCACAATGAAGTCAACGAACTCCGTTTTGTAGGTATCAAGGGGAAACTTTGTTGCTTATAGTAGCAGCAAGTTAGTGTTACCTAAAGTTTATCTGGAT</genome_strand>
        <mrna_strand>GAAGGGTGTGGAGAATGTAGAGGCAACCACGAAGCCTGAGAGAGTAAAAAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCCGAGTAGAAGTGCCCGGAAACAATATGCTAAAAGGCAATGGTTGCGAGAAATGGTCAAAATTTATAAGAATGTAGCTTCTGAAGCAGAGGGACTT...................................................................................................................................AAGGAACTGCAGGCTAATGGTGGAAGAAGAGCTGGTAAATTACACCCAAAGTGGCTTGTTAATGGTGAGACTGATGGCAAACCAATGGCACGT...................................................................................AGGAACTGGAAGCAGCAACAAAGCAAAACTGAATATCAAGAGGTGAATGGCCAACCAAAAGGACTA.................................................................................CTGCACTGGAAGAAATTGCGGGAAGAAGATAAGGGTAGAGATACGAACAAACAAGATCAGGCGAATGAAAAAAGCACCTTCTGTGGAGAACCAGGACAACACAATGATATGGAGGCTGAAACTATTCCAG..............................................................................................................................................................................................................................ATCAAGCTTTGCAGCATGATCAAGTGCAAGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTTTTTCCGTCAATTCATGAAGTTTGCCTTGTCAAAAATGGTAATTCAGACTCTGTAGCAGGACTTCCTGCCACAAACAAATCAAATCCAGTCCTTAAGGCTGCTAAAAAGAAAACTAATGGCCCAGCTATAG.................................................................................................................................................................................................................................................AAAAAGGAGTAAACCTCTGGGAACAACACAGTGAGACCATCAACGCGGAGAAGGAACAGTTACATGAAGAAAGTAGCTGGGGTACGTGGAGCTCTGCGAAGAAGAGCTCATGGTCAGAGAGAGCCTTGAAAGGCAGTGCTCGTGGTCCTACAATGGCCTTTCGAAGATATAAAAGATGAAATATGAGATGAAAGCAACTTGTATATATTTGTG-TCCTTACTCTCACAATGAAGTCAACGAACTCCGTTTTGTAGGTATCTAGGGGAAACTTTGTTGCTTATAGTAGCAGCAAGTTAGTGTTACCT-AAGTTTATCTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E237670" ref_strand="+" ref_description="SGN-E237670 [cLED-19-I18]">
      <seq>aggaactgcaggctaatggtggaagaagagctggtaaattacacccaaagtggcttgttaatggtgagactgatggcaaaccaatggcacgtaggaactggaagcagcaacaaagcaaaactgaatatcaagaggtgaatggccaaccaaaaggactactgcactggaagaaattgcgggaagaagataagggtagagatacgaacaaacaagatcaggcgaatgaaaaaagcaccttctgtggagaaccaggacaacacaatgatatggaggctgaaactattccaggttttttttaatgattcagctgtcctccacttttcagggggaggacttttggatgctattcttcttcctaccagttcttaaaatattaatccaaatctaaccgctttttttgccatagtttcagttttgcattctttatggaagaactctggttatcaataaaaataaaaatatggaagaactatagagtcttgagttttttcttttttgatttaatgcagatcaagctttgcagcatgatcaagtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="75263" stop="76563"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75563" g_stop="75654" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75655" i_stop="75737" i_length="83">
            <donor d_prob="0.342" d_score="1.00"/>
            <acceptor a_prob="0.488" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="75738" g_stop="75803" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="158" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75804" i_stop="75884" i_length="81">
            <donor d_prob="0.895" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75885" g_stop="76263" g_length="379"/>
          <reference_exon_boundary r_type="cDNA" r_start="159" r_stop="536" r_length="378" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E237670" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E237670" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75563" e_stop="75654"/>
          <exon e_start="75738" e_stop="75803"/>
          <exon e_start="75885" e_stop="76263"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAACTGCAGGCTAATGGTGGAAGAAGAGCTGGTAAATTACACCCAAAGTGGCTTGTTAATGGTGAGACTGATGGCAAACCAATGGCACGTGTGAGTAGTGAGATGTCGAGAAGTACTTCTTGCCTTTGCTTCTGAATCATGTATCAAAAACTTATATGATAAAGACTTTGCAGAGGAACTGGAAGCAGCAACAAAGCAAAACTGAATATCAAGAGGTGAATGGCCAACCAAAAGGACTAGTGAGTAATCAGACTTGAACAAATGTTTTAATTCTTCTGCATAGTCTCATTTCTGTTGATAAAGTAGTGTCCCACATGTAGCTGCACTGGAAGAAATTGCGGGAAGAAGATAAGGGTAGAGATACGAACAAACAAGATCAGGCGAATGAAAAAAGCACCTTCTGTGGAGAACCAGGACAACACAATGATATGGAGGCTGAAACTATTCCAGGTTTTTTTTTAATGATTCAGCTGTCCTCCACTTTTCAGGGGGAGGACTTTTGGATGCTATTCTTCTTCCTACCAGTTCTTAAAATATTAATCCAAATCTAACCGCTTTTTTTGCCATAGTTTCAGTTTTGCATTCTTTATGGAAGAACTCTGGTTATCAATAAAAATAAAAATATGGAAGAACTATAGAGTCTTGAGTTTTTTCTTTTTTGATTTAATGCAGATCAAGCTTTGCAGCATGATCAAGTGC</genome_strand>
        <mrna_strand>AGGAACTGCAGGCTAATGGTGGAAGAAGAGCTGGTAAATTACACCCAAAGTGGCTTGTTAATGGTGAGACTGATGGCAAACCAATGGCACGT...................................................................................AGGAACTGGAAGCAGCAACAAAGCAAAACTGAATATCAAGAGGTGAATGGCCAACCAAAAGGACTA.................................................................................CTGCACTGGAAGAAATTGCGGGAAGAAGATAAGGGTAGAGATACGAACAAACAAGATCAGGCGAATGAAAAAAGCACCTTCTGTGGAGAACCAGGACAACACAATGATATGGAGGCTGAAACTATTCCAGG-TTTTTTTTAATGATTCAGCTGTCCTCCACTTTTCAGGGGGAGGACTTTTGGATGCTATTCTTCTTCCTACCAGTTCTTAAAATATTAATCCAAATCTAACCGCTTTTTTTGCCATAGTTTCAGTTTTGCATTCTTTATGGAAGAACTCTGGTTATCAATAAAAATAAAAATATGGAAGAACTATAGAGTCTTGAGTTTTTTCTTTTTTGATTTAATGCAGATCAAGCTTTGCAGCATGATCAAGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E314652" ref_strand="+" ref_description="SGN-E314652 [cTOA-20-D6]">
      <seq>aaaaccctagccaatcagcaatactacaaaatccaaactccgaccaattttccggcgacaatcacattgcttttccacagtgactgatggagtccaactgcaaatccactaggcttacgcctaagaaatgctccaagaataccgaaaatttgaacccaaatgtcgaaaacagtccggggttttcaaaatcttgtaaatcaccaatgatggccaaatcggcgatgaaaacccaaaagtcagtttccagaaaccctaatactagtcaattggcttcgccttcacccaaaaacaaaattcgtcagaggaagtttgttattgccaagaagaagaagtctaatagagatgaagtgaacgcttcaatggtttgtaagtgtaataaggttggtgatgagaaaaagaagtgtctttgtgttgcttacgagactctcagggcttctcaagaagagttcttcaagaatcgtagtggaaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="78794" stop="79865"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79094" g_stop="79565" g_length="472"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="472" r_length="472" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E314652" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314652" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79094" e_stop="79565"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACCCTAGCCAATCAGCAATACTACAAAATCCAAACTCCGACCAATTTTCCGGCGACAATCACATTGCTTTTCCACAGTGACTGATGGAGTCCAACTGCAAATCCACTAGGCTTACGCCTAAGAAATGCTCCAAGAATACCGAAAATTTGAACCCAAATGTCGAAAACAGTCCGGGGTTTTCAAAATCTTGTAAATCACCAATGATGGCCAAATCGGCGATGAAAACCCAAAAGTCAGTTTCCAGAAACCCTAATACTAGTCAATTGGCTTCGCCTTCACCCAAAAACAAAATTCGTCAGAGGAAGTTTGTTATTGCCAAGAAGAAGAAGTCTAATAGAGATGAAGTGAACGCTTCAATGGTTTGTAAGTGTAATAAGGTTGGTGATGAGAAAAAGAAGTGTCTTTGTGTTGCTTACGAGACTCTCAGGGCTTCTCAAGAAGAGTTCTTCAAGAATCGTAGTGGAAATGA</genome_strand>
        <mrna_strand>AAAACCCTAGCCAATCAGCAATACTACAAAATCCAAACTCCGACCAATTTTCCGGCGACAATCACATTGCTTTTCCACAGTGACTGATGGAGTCCAACTGCAAATCCACTAGGCTTACGCCTAAGAAATGCTCCAAGAATACCGAAAATTTGAACCCAAATGTCGAAAACAGTCCGGGGTTTTCAAAATCTTGTAAATCACCAATGATGGCCAAATCGGCGATGAAAACCCAAAAGTCAGTTTCCAGAAACCCTAATACTAGTCAATTGGCTTCGCCTTCACCCAAAAACAAAATTCGTCAGAGGAAGTTTGTTATTGCCAAGAAGAAGAAGTCTAATAGAGATGAAGTGAACGCTTCAATGGTTTGTAAGTGTAATAAGGTTGGTGATGAGAAAAAGAAGTGTCTTTGTGTTGCTTACGAGACTCTCAGGGCTTCTCAAGAAGAGTTCTTCAAGAATCGTAGTGGAAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E340354" ref_strand="+" ref_description="SGN-E340354 [cTOF-2-H15]">
      <seq>ttgttgggactgtaaagagggggagggagaggttgttggaagaagcaagacaaagtgtacctgactctagttctgggaaagtgttaaatcttgtcaaggcttttgagaagctcctcacaccaaaaaaaaatgtgtgcgaggagaaaggggaaaaagatgaaaaggaagaagagtctagcaaggaacaacaaggcttacaaccccccatgattcctgagacacaggtatcttcatcttcgttttgtccaccggattttttcctcacctccgagagtttaggcttggattcgcgtcgtgcctcctcattggatagcagccatggatgcttcagtatttcaagcaggacttcaggtggtggtcaaagaagcagacgcgatagtgctgaatcaataggcacgcttcctagaagaagctggaagagaagacatcgcaaaccaacctcccagaagcccttcaaacttataactgaggaaaggggaaaaaacaaggagcaagaatttgttaagaaagtgcaacaaatggtggaggaagaggagaaacagaggataccaattgcacaaggccttccatggacaacagacgagccagagtgtttgtcaaagcctccggtaaaagagatcacaaggccagttgatctggtgctgcacagtgacattagggctgttgaacgttttgagttcgaccatcangtagcggaaaaactgagctatattgaacaatacanaatggaaagagagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="79469" stop="82167"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79769" g_stop="80093" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80094" i_stop="80342" i_length="249">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80343" g_stop="80394" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="377" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80395" i_stop="80479" i_length="85">
            <donor d_prob="0.589" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80480" g_stop="80572" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="470" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80573" i_stop="81039" i_length="467">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="81040" g_stop="81159" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="590" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="81160" i_stop="81443" i_length="284">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="81444" g_stop="81542" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="689" r_length="99" r_score="0.980"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="81543" i_stop="81817" i_length="275">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.969" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="81818" g_stop="81867" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="690" r_stop="739" r_length="50" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E340354" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>739</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E340354" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79769" e_stop="80093"/>
          <exon e_start="80343" e_stop="80394"/>
          <exon e_start="80480" e_stop="80572"/>
          <exon e_start="81040" e_stop="81159"/>
          <exon e_start="81444" e_stop="81542"/>
          <exon e_start="81818" e_stop="81867"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTGGGACTGTAAAGAGGGGGAGGGAGAGGTTGTTGGAAGAAGCAAGACAAAGTGTACCTGACTCTAGTTCTGGGAAAGTGTTAAATCTTGTCAAGGCTTTTGAGAAGCTCCTCACACCAAAAAAAAATGTGTGCGAGGAGAAAGGGGAAAAAGATGAAAAGGAAGAAGAGTCTAGCAAGGAACAACAAGGCTTACAACCCCCCAAGATTCCTGAGACACAGGTATCTTCATCTTCGTTTTGTCCACCGGATTTTTTCCTCACCTCCGAGAGTTTAGGCTTGGATTCGCGTCGTGCCTCCTCATTGGATAGCAGCCATGGATGGTCAGTATTCGGAACACCAGTGATTCAGTTTTATTTTCTGTTTCACTTTCCCATGTTAGAAGGATTCACTATATTATCAACTAGTCTTAAGCTGATTTTCAACCCTGCTTTATCTGAGCTTGTATGTAGTAGATTCATATAGTAGAGTCCTATTTGTTTATGATGGAATGTAACTTTTGCTTGTTGTTGTTCTTTTGTCCCTCATTTGGGTGCTGATGAATTTGTTTTACTTATTTTTGCTATTTGAAGCTTCAGTATTTCAAGCAGGACTTCAGGTGGTGGTCAAAGAAGCAGACGCGATGTAAGAATTTATAATCCATCCATTACCGTTAGGCGAGCAATTTGTGTTGGCCTCTGTTGATTTATTGTCATTTGTAATGCTGCAGAGTGCTGAATCAATAGGCACGCTTCCTAGAAGAAGCTGGAAGAGAAGACATCGCAAACCAACCTCCCAGAAGCCCTTCAAACTTATAACTGAGGTTTGTGAGTTCTGTGTATGGTTACTCTAGCATTACCTACTTGGTTGCTTGTTGTGCAAGTATGACCAAATATGTGGTAGCATTATATATGGTTGAGGATGTGCTTATTTGGACAAATTTTTTAAACCGAATGGACTAGGAGACCTTACCTCTACCTCGTGGAGGTAGAGAGACTGTTTCTGAAGACTGGACTATGAAAGATGGATTGAATTTGTGGCTACAAGAAAATCAGAATATTGGTCTTCAAATTCCTTCTGTTGTTGACATTCATAATGGTCATTGTTCCCTGATCACTAGGTGGTCTTTATTTCTATAGTTTCCTCTTCTTTGAATCCACTGATTAATTATGTCCTTTCATTGTTGAACTGCATATATAATCAACCTTTTCAGTTTAGGGTGTCATGTTAAATCCAGTTAATCATTTACCAATTTACTTGAGGAGTTGCTTAGATTGGCTATTGCTGCAGGAAAGGGGAAAAAACAAGGAGCAAGAATTTGTTAAGAAAGTGCAACAAATGGTGGAGGAAGAGGAGAAACAGAGGATACCAATTGCACAAGGCCTTCCATGGACAACAGACGAGCCAGAGGTAGCGTAGGCTTTTCACTGTAGTCATTTCTAATAAGTACTTTATTTGTGAATATATCTACAAGATTATCTTGTTACTATGTCCAGAACTTAAAAGGAAATGCATCTTGTTGATCTAACATTTTACTGAAAGGAGTTTTCTGAACCAAAATAAAAGAGAAATTAAAGTAAAATGTTGTTGGAAGTTCATGTTATTACCTCTCTCACTACACACATCTTTTGCACTTGGGATTATACGTTAGCTAATGAAAACAAAACTGAATTGCTCCATTTTCAACTGTATAGTGTTTGTCAAAGCCTCCGGTAAAAGAGATCACAAGGCCAGTTGATCTGGTGCTGCACAGTGACATGAGGGCTGTTGAACGTTTTGAGTTCGACCATCAGGTAAACTTTTTTTTTCTTTACAAACTTTGGTCATTCATTTACATAGATTAATATCTCTTCATGAGAGGTAACTTTAGTTTTGTGCAAGATGCTGATATGAACATTATCATAATTTTTGTTTCTTCAAGAATATTTCACACGGAACATGTAAAAATGTATGTCTGTATAAATAGATTCCCTAAGAAAGTGCAACAATAAGAGGACCCAAGCAATTTTCTTCCAGTGAAACACTTGCATATGTACAGAAATAACCAATGTAAGTGCATTTGTATCAGGTAGCGGAAAAACTGAGCTATATTGAACAATACAAAATGGAAAGAGAAAG</genome_strand>
        <mrna_strand>TTGTTGGGACTGTAAAGAGGGGGAGGGAGAGGTTGTTGGAAGAAGCAAGACAAAGTGTACCTGACTCTAGTTCTGGGAAAGTGTTAAATCTTGTCAAGGCTTTTGAGAAGCTCCTCACACCAAAAAAAAATGTGTGCGAGGAGAAAGGGGAAAAAGATGAAAAGGAAGAAGAGTCTAGCAAGGAACAACAAGGCTTACAACCCCCCATGATTCCTGAGACACAGGTATCTTCATCTTCGTTTTGTCCACCGGATTTTTTCCTCACCTCCGAGAGTTTAGGCTTGGATTCGCGTCGTGCCTCCTCATTGGATAGCAGCCATGGATG.........................................................................................................................................................................................................................................................CTTCAGTATTTCAAGCAGGACTTCAGGTGGTGGTCAAAGAAGCAGACGCGAT.....................................................................................AGTGCTGAATCAATAGGCACGCTTCCTAGAAGAAGCTGGAAGAGAAGACATCGCAAACCAACCTCCCAGAAGCCCTTCAAACTTATAACTGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGGGAAAAAACAAGGAGCAAGAATTTGTTAAGAAAGTGCAACAAATGGTGGAGGAAGAGGAGAAACAGAGGATACCAATTGCACAAGGCCTTCCATGGACAACAGACGAGCCAGAG............................................................................................................................................................................................................................................................................................TGTTTGTCAAAGCCTCCGGTAAAAGAGATCACAAGGCCAGTTGATCTGGTGCTGCACAGTGACATTAGGGCTGTTGAACGTTTTGAGTTCGACCATCAN...................................................................................................................................................................................................................................................................................GTAGCGGAAAAACTGAGCTATATTGAACAATACANAATGGAAAGAGAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E217618" ref_strand="+" ref_description="SGN-E217618 [cLEL-25-O23](-)">
      <seq>tttaggcttggattcgcgtcgtgcctcctcattggatagcagccatggatgcttcagtatttcaagcaggacttcaggtggtggtcaaagaagcagacgcgatagtgctgaatcaataggcacgcttcctagaagaagctggaagagaagacatcgcaaaccaacctcccagaagcccttcaaacttataactgaggaaaggggaaaaaacaaggagcaagaatttgttaagaaagtgcaacaaatggtggaggaagaggagaaacagaggataccaattgcacaaggccttccatggacaacagacgagccagagtgtttgtcaaagcctccggtaaaagagatcacaaggccagttgatctggtgctgcacagtgacattagggctgttgaacgttttgagttcgaccatcaggtagcggaaaaactgagctatattgaacaatacaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="79743" stop="82154"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80043" g_stop="80093" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80094" i_stop="80342" i_length="249">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80343" g_stop="80394" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="103" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80395" i_stop="80479" i_length="85">
            <donor d_prob="0.589" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80480" g_stop="80572" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="196" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80573" i_stop="81039" i_length="467">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="81040" g_stop="81159" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="316" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="81160" i_stop="81443" i_length="284">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="81444" g_stop="81542" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="415" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="81543" i_stop="81817" i_length="275">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.969" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="81818" g_stop="81866" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="416" r_stop="464" r_length="49" r_score="0.898"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E217618" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E217618" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80043" e_stop="80093"/>
          <exon e_start="80343" e_stop="80394"/>
          <exon e_start="80480" e_stop="80572"/>
          <exon e_start="81040" e_stop="81159"/>
          <exon e_start="81444" e_stop="81542"/>
          <exon e_start="81818" e_stop="81866"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAGGCTTGGATTCGCGTCGTGCCTCCTCATTGGATAGCAGCCATGGATGGTCAGTATTCGGAACACCAGTGATTCAGTTTTATTTTCTGTTTCACTTTCCCATGTTAGAAGGATTCACTATATTATCAACTAGTCTTAAGCTGATTTTCAACCCTGCTTTATCTGAGCTTGTATGTAGTAGATTCATATAGTAGAGTCCTATTTGTTTATGATGGAATGTAACTTTTGCTTGTTGTTGTTCTTTTGTCCCTCATTTGGGTGCTGATGAATTTGTTTTACTTATTTTTGCTATTTGAAGCTTCAGTATTTCAAGCAGGACTTCAGGTGGTGGTCAAAGAAGCAGACGCGATGTAAGAATTTATAATCCATCCATTACCGTTAGGCGAGCAATTTGTGTTGGCCTCTGTTGATTTATTGTCATTTGTAATGCTGCAGAGTGCTGAATCAATAGGCACGCTTCCTAGAAGAAGCTGGAAGAGAAGACATCGCAAACCAACCTCCCAGAAGCCCTTCAAACTTATAACTGAGGTTTGTGAGTTCTGTGTATGGTTACTCTAGCATTACCTACTTGGTTGCTTGTTGTGCAAGTATGACCAAATATGTGGTAGCATTATATATGGTTGAGGATGTGCTTATTTGGACAAATTTTTTAAACCGAATGGACTAGGAGACCTTACCTCTACCTCGTGGAGGTAGAGAGACTGTTTCTGAAGACTGGACTATGAAAGATGGATTGAATTTGTGGCTACAAGAAAATCAGAATATTGGTCTTCAAATTCCTTCTGTTGTTGACATTCATAATGGTCATTGTTCCCTGATCACTAGGTGGTCTTTATTTCTATAGTTTCCTCTTCTTTGAATCCACTGATTAATTATGTCCTTTCATTGTTGAACTGCATATATAATCAACCTTTTCAGTTTAGGGTGTCATGTTAAATCCAGTTAATCATTTACCAATTTACTTGAGGAGTTGCTTAGATTGGCTATTGCTGCAGGAAAGGGGAAAAAACAAGGAGCAAGAATTTGTTAAGAAAGTGCAACAAATGGTGGAGGAAGAGGAGAAACAGAGGATACCAATTGCACAAGGCCTTCCATGGACAACAGACGAGCCAGAGGTAGCGTAGGCTTTTCACTGTAGTCATTTCTAATAAGTACTTTATTTGTGAATATATCTACAAGATTATCTTGTTACTATGTCCAGAACTTAAAAGGAAATGCATCTTGTTGATCTAACATTTTACTGAAAGGAGTTTTCTGAACCAAAATAAAAGAGAAATTAAAGTAAAATGTTGTTGGAAGTTCATGTTATTACCTCTCTCACTACACACATCTTTTGCACTTGGGATTATACGTTAGCTAATGAAAACAAAACTGAATTGCTCCATTTTCAACTGTATAGTGTTTGTCAAAGCCTCCGGTAAAAGAGATCACAAGGCCAGTTGATCTGGTGCTGCACAGTGACATGAGGGCTGTTGAACGTTTTGAGTTCGACCATCAGGTAAACTTTTTTTTTCTTTACAAACTTTGGTCATTCATTTACATAGATTAATATCTCTTCATGAGAGGTAACTTTAGTTTTGTGCAAGATGCTGATATGAACATTATCATAATTTTTGTTTCTTCAAGAATATTTCACACGGAACATGTAAAAATGTATGTCTGTATAAATAGATTCCCTAAGAAAGTGCAACAATAAGAGGACCCAAGCAATTTTCTTCCAGTGAAACACTTGCATATGTACAGAAATAACCAATGTAAGTGCATTTGTATCAGGTAGCGGAAAAACTGAGCTATATTGAACAATACAAAATGGAAAGAGAAA</genome_strand>
        <mrna_strand>TTTAGGCTTGGATTCGCGTCGTGCCTCCTCATTGGATAGCAGCCATGGATG.........................................................................................................................................................................................................................................................CTTCAGTATTTCAAGCAGGACTTCAGGTGGTGGTCAAAGAAGCAGACGCGAT.....................................................................................AGTGCTGAATCAATAGGCACGCTTCCTAGAAGAAGCTGGAAGAGAAGACATCGCAAACCAACCTCCCAGAAGCCCTTCAAACTTATAACTGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGGGAAAAAACAAGGAGCAAGAATTTGTTAAGAAAGTGCAACAAATGGTGGAGGAAGAGGAGAAACAGAGGATACCAATTGCACAAGGCCTTCCATGGACAACAGACGAGCCAGAG............................................................................................................................................................................................................................................................................................TGTTTGTCAAAGCCTCCGGTAAAAGAGATCACAAGGCCAGTTGATCTGGTGCTGCACAGTGACATTAGGGCTGTTGAACGTTTTGAGTTCGACCATCAG...................................................................................................................................................................................................................................................................................GTAGCGGAAAAACTGAGCTATATTGAACAATACAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E217654" ref_strand="+" ref_description="SGN-E217654 [cLEL-25-O11](-)">
      <seq>cgcgtcgtgcctcctccattggatagcagccatggatgcttcagtatttcaagcaggacttcaggtggtggtcaaagaaagcagacgcgaaagtgctgaatcaataggcacgcttcctagaagaagctggaagagaagacatcgcaaaccaacctcccagaagcccttcaaacttataactgaggaaaggggaaaaaacaaggagcaagaatttgttaagaaagtgcaacaaatggtggaggaagaggagaaacagaggataccaattgcacaaggccttccatggacaacagacgagccagagtgtttgtcaaagcctccggtaaaagagatcacaaggccagttgatctggtgctgcacagtgacattagggctgttgaacgttttgagttcgaccatcaggtagcggaaaaactgagctatattgaacaatacaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="79757" stop="82154"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80057" g_stop="80093" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80094" i_stop="80342" i_length="249">
            <donor d_prob="0.949" d_score="0.00"/>
            <acceptor a_prob="0.988" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80343" g_stop="80394" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="91" r_length="53" r_score="0.942"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80395" i_stop="80479" i_length="85">
            <donor d_prob="0.589" d_score="0.94"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80480" g_stop="80572" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="184" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80573" i_stop="81039" i_length="467">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="81040" g_stop="81159" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="304" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="81160" i_stop="81443" i_length="284">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="81444" g_stop="81542" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="403" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="81543" i_stop="81817" i_length="275">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.969" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="81818" g_stop="81866" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="452" r_length="49" r_score="0.898"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E217654" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>450</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E217654" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80057" e_stop="80093"/>
          <exon e_start="80343" e_stop="80394"/>
          <exon e_start="80480" e_stop="80572"/>
          <exon e_start="81040" e_stop="81159"/>
          <exon e_start="81444" e_stop="81542"/>
          <exon e_start="81818" e_stop="81866"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCGTCGTGCCTCCT-CATTGGATAGCAGCCATGGATGGTCAGTATTCGGAACACCAGTGATTCAGTTTTATTTTCTGTTTCACTTTCCCATGTTAGAAGGATTCACTATATTATCAACTAGTCTTAAGCTGATTTTCAACCCTGCTTTATCTGAGCTTGTATGTAGTAGATTCATATAGTAGAGTCCTATTTGTTTATGATGGAATGTAACTTTTGCTTGTTGTTGTTCTTTTGTCCCTCATTTGGGTGCTGATGAATTTGTTTTACTTATTTTTGCTATTTGAAGCTTCAGTATTTCAAGCAGGACTTCAGGTGGTGGTCAAAGA-AGCAGACGCGATGTAAGAATTTATAATCCATCCATTACCGTTAGGCGAGCAATTTGTGTTGGCCTCTGTTGATTTATTGTCATTTGTAATGCTGCAGAGTGCTGAATCAATAGGCACGCTTCCTAGAAGAAGCTGGAAGAGAAGACATCGCAAACCAACCTCCCAGAAGCCCTTCAAACTTATAACTGAGGTTTGTGAGTTCTGTGTATGGTTACTCTAGCATTACCTACTTGGTTGCTTGTTGTGCAAGTATGACCAAATATGTGGTAGCATTATATATGGTTGAGGATGTGCTTATTTGGACAAATTTTTTAAACCGAATGGACTAGGAGACCTTACCTCTACCTCGTGGAGGTAGAGAGACTGTTTCTGAAGACTGGACTATGAAAGATGGATTGAATTTGTGGCTACAAGAAAATCAGAATATTGGTCTTCAAATTCCTTCTGTTGTTGACATTCATAATGGTCATTGTTCCCTGATCACTAGGTGGTCTTTATTTCTATAGTTTCCTCTTCTTTGAATCCACTGATTAATTATGTCCTTTCATTGTTGAACTGCATATATAATCAACCTTTTCAGTTTAGGGTGTCATGTTAAATCCAGTTAATCATTTACCAATTTACTTGAGGAGTTGCTTAGATTGGCTATTGCTGCAGGAAAGGGGAAAAAACAAGGAGCAAGAATTTGTTAAGAAAGTGCAACAAATGGTGGAGGAAGAGGAGAAACAGAGGATACCAATTGCACAAGGCCTTCCATGGACAACAGACGAGCCAGAGGTAGCGTAGGCTTTTCACTGTAGTCATTTCTAATAAGTACTTTATTTGTGAATATATCTACAAGATTATCTTGTTACTATGTCCAGAACTTAAAAGGAAATGCATCTTGTTGATCTAACATTTTACTGAAAGGAGTTTTCTGAACCAAAATAAAAGAGAAATTAAAGTAAAATGTTGTTGGAAGTTCATGTTATTACCTCTCTCACTACACACATCTTTTGCACTTGGGATTATACGTTAGCTAATGAAAACAAAACTGAATTGCTCCATTTTCAACTGTATAGTGTTTGTCAAAGCCTCCGGTAAAAGAGATCACAAGGCCAGTTGATCTGGTGCTGCACAGTGACATGAGGGCTGTTGAACGTTTTGAGTTCGACCATCAGGTAAACTTTTTTTTTCTTTACAAACTTTGGTCATTCATTTACATAGATTAATATCTCTTCATGAGAGGTAACTTTAGTTTTGTGCAAGATGCTGATATGAACATTATCATAATTTTTGTTTCTTCAAGAATATTTCACACGGAACATGTAAAAATGTATGTCTGTATAAATAGATTCCCTAAGAAAGTGCAACAATAAGAGGACCCAAGCAATTTTCTTCCAGTGAAACACTTGCATATGTACAGAAATAACCAATGTAAGTGCATTTGTATCAGGTAGCGGAAAAACTGAGCTATATTGAACAATACAAAATGGAAAGAGAAA</genome_strand>
        <mrna_strand>CGCGTCGTGCCTCCTCCATTGGATAGCAGCCATGGATG.........................................................................................................................................................................................................................................................CTTCAGTATTTCAAGCAGGACTTCAGGTGGTGGTCAAAGAAAGCAGACGCGAA.....................................................................................AGTGCTGAATCAATAGGCACGCTTCCTAGAAGAAGCTGGAAGAGAAGACATCGCAAACCAACCTCCCAGAAGCCCTTCAAACTTATAACTGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGGGGAAAAAACAAGGAGCAAGAATTTGTTAAGAAAGTGCAACAAATGGTGGAGGAAGAGGAGAAACAGAGGATACCAATTGCACAAGGCCTTCCATGGACAACAGACGAGCCAGAG............................................................................................................................................................................................................................................................................................TGTTTGTCAAAGCCTCCGGTAAAAGAGATCACAAGGCCAGTTGATCTGGTGCTGCACAGTGACATTAGGGCTGTTGAACGTTTTGAGTTCGACCATCAG...................................................................................................................................................................................................................................................................................GTAGCGGAAAAACTGAGCTATATTGAACAATACAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E396969" ref_strand="+" ref_description="SGN-E396969 [TUS-44-J1]">
      <seq>tgaatatgtcatagtttcttttgtgaacggcaagcaggttgttgcagaaaattcaatattccaagctaaagcggaatctgcaatcacaatacctaaaaggtcacaggtttagtgctgtagagtggtgctaatgctttccatcttttgatatcatgcactgggacattgtggttcttgttgggctgttggtgctgctgagtcgttgtctgattgtttctgatactcattttggctagaatatatctatgtcagcaaatgatatcatagcatgctgtggtcactgaagaggatcatccagtgggcaggaaagggaatttgattactttgtgtggttggtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="88645" stop="90241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88945" g_stop="89104" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89105" i_stop="89213" i_length="109">
            <donor d_prob="0.592" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89214" g_stop="89289" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="236" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89290" i_stop="89375" i_length="86">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.565" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89376" g_stop="89427" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="288" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89428" i_stop="89891" i_length="464">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89892" g_stop="89941" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="338" r_length="50" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E396969" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>338</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E396969" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88945" e_stop="89104"/>
          <exon e_start="89214" e_stop="89289"/>
          <exon e_start="89376" e_stop="89427"/>
          <exon e_start="89892" e_stop="89941"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAATATGTCATAGTTTCTTTTGTGAACGGCAAGCAGGTTGTTGCAGAAAATTCAATATTCCAAGCTAAAGCGGAATCTGCAATCACAATACCTAAAAGGTCACAGGTTTAGTGCTGTAGAGTGGTGCTAATGCTTTCCATCTTTTGATATCATGCACTGGTACTGTTTTGCCATACAGATTAGTTGATTTGTCTTGGTTCTAATTTCATCATTTGTTTTTTTTCCTCCTTATGCTAATCATTTGAACAATCTGACCATTTGTATTCAGGGACATTGTGGTTCTTGTTGGGCTGTTGGTGCTGCTGAGTCGTTGTCTGATTGTTTCTGATACTCATTTTGGCTAGGTAAATTAATTCCTTCATGCAAACAAAGTCTTGCAAGTTTATTCTAGTTATGGTCACTAATGATTCAATTTTTATATGTGAGGCAGAATATATCTATGTCAGCAAATGATATCATAGCATGCTGTGGTCACTGAAGAGGTAGTAATACTGTTACATCTTTTTATATGTTGTAGGATTTTTACACCCATTTTAAAAAGATAACCCATTTTATACCCATTTTCCTGTCAGTGTAACCCTTAGTTTGATAAAAAGGGATGTTCCCACCCTGGATATTGCCATTCCATAGTTCAAGAGGAAGTGTGTTAAAAAGAATCTACATCGGAGTAAGTCCAAGCATTTTTACGTCAATGCGTTCCTGAACGTGGAACTTGATGTCTCGACGCCTCAATGTGATTACTAATTCTTCAAGTAAAACACTAATTAAATAGGATTCATTCAAGTTTCTGAAGATTTGGGGAATAATAACATTTTAAAGCTTCATATTCTTCCCCTCCTAAGTTATCCGCAACATTTGTAATCTGCAACTTGGATATGGGCTGCAAATTACCATTTCTTTAACTACTACTGAATCTGGTGTAATGTTTGGTGACAATGCTGTTCAGGATCATCCAGTGGGCAGGAAAGGGAATTTGATTACTTTGTGTGGTTGGTT</genome_strand>
        <mrna_strand>TGAATATGTCATAGTTTCTTTTGTGAACGGCAAGCAGGTTGTTGCAGAAAATTCAATATTCCAAGCTAAAGCGGAATCTGCAATCACAATACCTAAAAGGTCACAGGTTTAGTGCTGTAGAGTGGTGCTAATGCTTTCCATCTTTTGATATCATGCACTG.............................................................................................................GGACATTGTGGTTCTTGTTGGGCTGTTGGTGCTGCTGAGTCGTTGTCTGATTGTTTCTGATACTCATTTTGGCTAG......................................................................................AATATATCTATGTCAGCAAATGATATCATAGCATGCTGTGGTCACTGAAGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCATCCAGTGGGCAGGAAAGGGAATTTGATTACTTTGTGTGGTTGGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E277605" ref_strand="+" ref_description="SGN-E277605 [cLER-6-C21]">
      <seq>gaatatgtcatagtttcttttgtgaacggcaagcaggttgttgcagaaaattcaatattccaagctaaagcggaatctgcaatcacaatacctaaaaggtcacaggtttagtgctgtagagtggtgctaatgctttccatcttttgatatcatgcactgggacattgtggttcttgttgggctgttggtgctgctgagtcgttgtctgattgtttctgatactcattttggctagaatatatctatgtcagcaaatgatatcatagcatgctgtggtcactgaagaggatcatccagtgggcaggaaagggaatttgattactttgtgtggttggttaaagaacacggcaacgacatgattgctactccagctaatactctgcttgttgaaagtggaatgagattcatattatatgaaatcaaattgctcgagtattaagtaaatctagatttctttctagacacaactgaatctgtttttgagagactggaagattagagatactttattctcttcggacagaaatctttcccaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="88646" stop="90441"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88946" g_stop="89104" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="159" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89105" i_stop="89213" i_length="109">
            <donor d_prob="0.592" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89214" g_stop="89289" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="235" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89290" i_stop="89375" i_length="86">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.565" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89376" g_stop="89427" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="287" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89428" i_stop="89891" i_length="464">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89892" g_stop="90141" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="537" r_length="250" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E277605" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E277605" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88946" e_stop="89104"/>
          <exon e_start="89214" e_stop="89289"/>
          <exon e_start="89376" e_stop="89427"/>
          <exon e_start="89892" e_stop="90141"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATATGTCATAGTTTCTTTTGTGAACGGCAAGCAGGTTGTTGCAGAAAATTCAATATTCCAAGCTAAAGCGGAATCTGCAATCACAATACCTAAAAGGTCACAGGTTTAGTGCTGTAGAGTGGTGCTAATGCTTTCCATCTTTTGATATCATGCACTGGTACTGTTTTGCCATACAGATTAGTTGATTTGTCTTGGTTCTAATTTCATCATTTGTTTTTTTTCCTCCTTATGCTAATCATTTGAACAATCTGACCATTTGTATTCAGGGACATTGTGGTTCTTGTTGGGCTGTTGGTGCTGCTGAGTCGTTGTCTGATTGTTTCTGATACTCATTTTGGCTAGGTAAATTAATTCCTTCATGCAAACAAAGTCTTGCAAGTTTATTCTAGTTATGGTCACTAATGATTCAATTTTTATATGTGAGGCAGAATATATCTATGTCAGCAAATGATATCATAGCATGCTGTGGTCACTGAAGAGGTAGTAATACTGTTACATCTTTTTATATGTTGTAGGATTTTTACACCCATTTTAAAAAGATAACCCATTTTATACCCATTTTCCTGTCAGTGTAACCCTTAGTTTGATAAAAAGGGATGTTCCCACCCTGGATATTGCCATTCCATAGTTCAAGAGGAAGTGTGTTAAAAAGAATCTACATCGGAGTAAGTCCAAGCATTTTTACGTCAATGCGTTCCTGAACGTGGAACTTGATGTCTCGACGCCTCAATGTGATTACTAATTCTTCAAGTAAAACACTAATTAAATAGGATTCATTCAAGTTTCTGAAGATTTGGGGAATAATAACATTTTAAAGCTTCATATTCTTCCCCTCCTAAGTTATCCGCAACATTTGTAATCTGCAACTTGGATATGGGCTGCAAATTACCATTTCTTTAACTACTACTGAATCTGGTGTAATGTTTGGTGACAATGCTGTTCAGGATCATCCAGTGGGCAGGAAAGGGAATTTGATTACTTTGTGTGGTTGGTTAAAGAACACGGCAACGACATGATTGCTACTCCAGCTAATACTCTGCTTGTTGAAAGTGGAATGAGATTCATATTATATGAAATCAAATTGCTCGAGTATTAAGTAAATCTAGATTTCTTTCTAGACACAACTGAATCTGTTTTTGAGAGACTGGAAGATTAGAGATACTTTATTCTCTTCGGACAGAAATCTTTCCCACA</genome_strand>
        <mrna_strand>GAATATGTCATAGTTTCTTTTGTGAACGGCAAGCAGGTTGTTGCAGAAAATTCAATATTCCAAGCTAAAGCGGAATCTGCAATCACAATACCTAAAAGGTCACAGGTTTAGTGCTGTAGAGTGGTGCTAATGCTTTCCATCTTTTGATATCATGCACTG.............................................................................................................GGACATTGTGGTTCTTGTTGGGCTGTTGGTGCTGCTGAGTCGTTGTCTGATTGTTTCTGATACTCATTTTGGCTAG......................................................................................AATATATCTATGTCAGCAAATGATATCATAGCATGCTGTGGTCACTGAAGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCATCCAGTGGGCAGGAAAGGGAATTTGATTACTTTGTGTGGTTGGTTAAAGAACACGGCAACGACATGATTGCTACTCCAGCTAATACTCTGCTTGTTGAAAGTGGAATGAGATTCATATTATATGAAATCAAATTGCTCGAGTATTAAGTAAATCTAGATTTCTTTCTAGACACAACTGAATCTGTTTTTGAGAGACTGGAAGATTAGAGATACTTTATTCTCTTCGGACAGAAATCTTTCCCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E396968" ref_strand="+" ref_description="SGN-E396968 [TUS-44-J1](-)">
      <seq>aaccagttaagctctttataagaagcagcatttgggagctgaggagcaaattttaagtcagctttttcgcggtggtgatatctttctttccgctcttcaaaagaggttgctttgatgaaaatttgcatcgccatcacggttcaagtttcatactagtacaaaatagtgattgatggtacaaaaattgagtgaatttttcattaggacaataaaaataaagattggaatcaaaagggcatggaagaaggagacctgctacatgtaagtccgcaggtcaacctgggactgtcattgtactctgatcaaactaaaaggtcacaggtttagattgtagagtttttttatagagtggttcaatttttatgcgaagttactttcaattgtcaaataattgtttgacagagttcaaaataattgttggccaccaactctacctttttgaattcttgtgttaccatctgctataattgtagaaatagtagtggtttatattctagtataattatgtttatctgcttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="89936" stop="91058"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90236" g_stop="90763" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="528" r_length="528" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E396968" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E396968" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90236" e_stop="90763"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCAGTTAAGCTCTTTATAAGAAACAGCATTTGGGAGCTGAGGAGCAAATCTTAAGTCAGCTTCTTCGCGGTGGTGATATCTTTCTTTCCGCTCTTCAAAAGAGGTTGCTTTGATGAAAATTTGCATCGCCATCACGGTTCAAGTTTCATACTAGTACAAAATAGTGATTGATGGTACAAAAATTGAGTGAATTTTTCATTAGGACAATAAAAAATAAGATTGGAATCAAAAGGGCATGGAAGAAGGAGACCTGCTACATGTAAGTCCGCAGGTCAACCTGGGACTGTCATTGTACTCTGATCAAACTAAAAGGTCACAGGTTTAGATTGTAGAGTTTTTTAATAGAGTGGTTCAATTTTTATGCGAAGTTACTTTTAATTGTCAAATAATTGTTTGACAGAGTTCAAAATAATTGTTGGCCACCAACTCTACCTTTTTGAATTCTAGTGTTACCATCTGCTATAATTGTAGAAATATTAGTGGTTTATATTCTAGTATAATTATGTTTATCTGCTTAAATAGGATC</genome_strand>
        <mrna_strand>AACCAGTTAAGCTCTTTATAAGAAGCAGCATTTGGGAGCTGAGGAGCAAATTTTAAGTCAGCTTTTTCGCGGTGGTGATATCTTTCTTTCCGCTCTTCAAAAGAGGTTGCTTTGATGAAAATTTGCATCGCCATCACGGTTCAAGTTTCATACTAGTACAAAATAGTGATTGATGGTACAAAAATTGAGTGAATTTTTCATTAGGACAATAAAAATAAAGATTGGAATCAAAAGGGCATGGAAGAAGGAGACCTGCTACATGTAAGTCCGCAGGTCAACCTGGGACTGTCATTGTACTCTGATCAAACTAAAAGGTCACAGGTTTAGATTGTAGAGTTTTTTTATAGAGTGGTTCAATTTTTATGCGAAGTTACTTTCAATTGTCAAATAATTGTTTGACAGAGTTCAAAATAATTGTTGGCCACCAACTCTACCTTTTTGAATTCTTGTGTTACCATCTGCTATAATTGTAGAAATAGTAGTGGTTTATATTCTAGTATAATTATGTTTATCTGCTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E220656" ref_strand="+" ref_description="SGN-E220656 [cLEL-12-O18](-)">
      <seq>gatgttgcagagtcggtgctaaggggactcctgcagaacatgaagagtaaagtgaacggtagcttgctcacagactatgccgaattcaagagggaaatgcagaacaacttattagtctgaacagttactacaactataggggtgcatggtgattaacactagttatcataactgataatccgaactaaaaaaaagttattatcagtttattgatttagcgattttgataatgttttgattttattgcttatcgagttatcttttcttaaccgtttgaggttttttcttaacgggttaactgattacttgatagtaaattataatacctacatttatattattttatgtataaagtcaataacttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="92155" stop="91197"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91934" g_stop="91920" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91919" i_stop="91850" i_length="70">
            <donor d_prob="0.889" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91849" g_stop="91493" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="373" r_length="358" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E220656" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>372</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220656" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91934" e_stop="91920"/>
          <exon e_start="91849" e_stop="91493"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGTTGCAGAGTCGGTTAGATACTGAACCTAATCTCTCTTGCGAAGGAGTTTAACAAAACTAATCTTTCTGCAATTTTGAGCAGGTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTAAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGGGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAATTGATTACTTGATAGTAAATTAAAATA-TTATATTTATATTATTTTATGTATAAAGTCCTTGACTTATATATTGG</genome_strand>
        <mrna_strand>GATGTTGCAGAGTCG......................................................................GTGCTAAGGGGACTCCTGCAGAACATGAAGAGTAAAGTGAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGAGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAACTGATTACTTGATAGTAAATTATAATACCTACATTTATATTATTTTATGTATAAAGTCAATAACTTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E222138" ref_strand="+" ref_description="SGN-E222138 [cLEL-36-M4](-)">
      <seq>cagaacaacttattagtctgaacagttactacaactataggggtgcatggtgattaacactagttatcataactgataatccgaactaaaaaaaagttattatcagtttattgatttagcgattttgataatgttttgattttattgcttatcgagttatcttttcttaaccgtttgaggttttttcttaacgggttaactgattacttgatagtaaattaaaatattatatttatattattttatgtataaaatcattgacttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="92065" stop="91197"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91765" g_stop="91493" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E222138" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>273</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222138" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91765" e_stop="91493"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGGGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAATTGATTACTTGATAGTAAATTAAAATATTATATTTATATTATTTTATGTATAAAGTCCTTGACTTATATATTGG</genome_strand>
        <mrna_strand>CAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGAGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAACTGATTACTTGATAGTAAATTAAAATATTATATTTATATTATTTTATGTATAAAATCATTGACTTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E396024" ref_strand="+" ref_description="SGN-E396024 [TUS-18-J14](-)">
      <seq>aaggttcttgaactcgacataataagatgggagcttcaggggttggatgatgtgctgaagccatctgagttctcacttggtgtaaaaggctctctttaccccgacagaaatggaccacggaccaggctgaaaggtcaactacagatgagtattagctttgttcttccccacgtcctagctttagtccctgaagctgttcgtagagatgttgcagagtcggtgctaaggggactactgcagaacatgaagagtaaagtgaacggtagcttgctcacagactatgccgaattcaagagggaaatgcagaacaacttattagtctgaacagttactacaactataggggtgcatggtgattaacactagttatcataactgataatccgaactaaaaaaaagttattatcagtttattgatttagcgattttgataatgttttgattttattgcttatcgagttatcttttcttaaccgtttgaggttttttcttaacgggttaactgattacttgatagtaaattaaaatattatatttatattattttatgtataaagtccttgacttataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="92513" stop="91197"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92213" g_stop="92193" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92192" i_stop="92118" i_length="75">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92117" g_stop="91920" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="219" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91919" i_stop="91850" i_length="70">
            <donor d_prob="0.889" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91849" g_stop="91500" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="569" r_length="350" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="570" polyA_stop="581"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E396024" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E396024" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92213" e_stop="92193"/>
          <exon e_start="92117" e_stop="91920"/>
          <exon e_start="91849" e_stop="91500"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGTTCTTGAACTCGACATAGTAAGTGTCAAACCTTAATAATCATATATACATTTGTTGTCTTTGTTGTGGAGTTGAAGCCACATAAATATGCAGATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTCCCCACGTCCTAGCTTTAGTCCCTGAAGCTGTTCGTAGAGATGTTGCAGAGTCGGTTAGATACTGAACCTAATCTCTCTTGCGAAGGAGTTTAACAAAACTAATCTTTCTGCAATTTTGAGCAGGTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTAAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGGGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAATTGATTACTTGATAGTAAATTAAAATATTATATTTATATTATTTTATGTATAAAGTCCTTGACTTAT</genome_strand>
        <mrna_strand>AAGGTTCTTGAACTCGACATA...........................................................................ATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTCCCCACGTCCTAGCTTTAGTCCCTGAAGCTGTTCGTAGAGATGTTGCAGAGTCG......................................................................GTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTGAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGAGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAACTGATTACTTGATAGTAAATTAAAATATTATATTTATATTATTTTATGTATAAAGTCCTTGACTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E220822" ref_strand="+" ref_description="SGN-E220822 [cLEL-22-P7](-)">
      <seq>aatactgtttctaaggttcttgaactcgacataataagatgggagcttcaggggttggatgatgtgctgaagccatctgagttctcacttggtgtaaaaggctctctttaccccgacagaaatggaccacggaccaggctgaaaggtgctaaggggactactgcagaacatgaagagtaaagtgaacggtagcttgctcacagactatgccgaattcaagagggaaatgcagaacaacttattagtctgaacagttactacaactataggggtgcatggtgattaacactagttatcataactgataatccgaactaaaaaaaagttattatcagtttattgatttagcgattttgataatgttttgattttattgcttatcgagttatcttttcttaaccgtttgaggttttttcttaacgggttaactgattacttgatagtaaattaaaatattatatttatattattttatgtataaagtccttgacttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="92525" stop="91197"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92225" g_stop="92193" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="33" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92192" i_stop="92118" i_length="75">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92117" g_stop="92006" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="145" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92005" i_stop="91850" i_length="156">
            <donor d_prob="0.112" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91849" g_stop="91502" g_length="348"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="493" r_length="348" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="494" polyA_stop="510"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E220822" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220822" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92225" e_stop="92193"/>
          <exon e_start="92117" e_stop="92006"/>
          <exon e_start="91849" e_stop="91502"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATACTGTTTCTAAGGTTCTTGAACTCGACATAGTAAGTGTCAAACCTTAATAATCATATATACATTTGTTGTCTTTGTTGTGGAGTTGAAGCCACATAAATATGCAGATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTCCCCACGTCCTAGCTTTAGTCCCTGAAGCTGTTCGTAGAGATGTTGCAGAGTCGGTTAGATACTGAACCTAATCTCTCTTGCGAAGGAGTTTAACAAAACTAATCTTTCTGCAATTTTGAGCAGGTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTAAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGGGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAATTGATTACTTGATAGTAAATTAAAATATTATATTTATATTATTTTATGTATAAAGTCCTTGACTT</genome_strand>
        <mrna_strand>AATACTGTTTCTAAGGTTCTTGAACTCGACATA...........................................................................ATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAG............................................................................................................................................................GTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTGAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGAGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAACTGATTACTTGATAGTAAATTAAAATATTATATTTATATTATTTTATGTATAAAGTCCTTGACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E221230" ref_strand="+" ref_description="SGN-E221230 [cLEL-22-P7](-)">
      <seq>gtaaaaggctctctttaccccgacagaaatggaccacggaccaggctgaaaggtgctaaggggactactgcagaacatgaagagtaaagtgaacggtagcttgctcacagactatgccgaattcaagagggaaatgcagaacaacttattagtctgaacagttactacaactataggggtgcatggtgattaacactagttatcataactgataatccgaactaaaaaaaagttattatcagtttattgatttagcgattttgataatgttttgattttattgcttatcgagttatcttttcttaaccgtttgaggttttttcttaacgggttaactgattacttgatagtaaattaaaatattatatttatattattttatgtataaagtccttgacttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="92357" stop="91197"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92057" g_stop="92006" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92005" i_stop="91850" i_length="156">
            <donor d_prob="0.112" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91849" g_stop="91502" g_length="348"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="400" r_length="348" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="401" polyA_stop="417"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E221230" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E221230" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92057" e_stop="92006"/>
          <exon e_start="91849" e_stop="91502"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTCCCCACGTCCTAGCTTTAGTCCCTGAAGCTGTTCGTAGAGATGTTGCAGAGTCGGTTAGATACTGAACCTAATCTCTCTTGCGAAGGAGTTTAACAAAACTAATCTTTCTGCAATTTTGAGCAGGTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTAAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGGGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAATTGATTACTTGATAGTAAATTAAAATATTATATTTATATTATTTTATGTATAAAGTCCTTGACTT</genome_strand>
        <mrna_strand>GTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAG............................................................................................................................................................GTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTGAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGAGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAACTGATTACTTGATAGTAAATTAAAATATTATATTTATATTATTTTATGTATAAAGTCCTTGACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E732796" ref_strand="+" ref_description="SGN-E732796 [LB03AF12]">
      <seq>ggccttgaccacggaccaggctgaaaggtcaactacagatgagtattagctttgttcttccccacgtcctagctttagtccctgaagctgttcgtagagatgttgcagagtcggtgctaaggggactactgcagaacatgaagagtaaagtgaacggtagcttgctcacagactatgccgaattcaagagggaaatgcagaacaacttattagtctgaacagttactacaactataggggtgcatggtgattaacactagttatcataactgataatccgaactaaaaaaaagttattatcagtttattgatttagcgattttgataatgttttgattttattgcttatcgagttatcttttcttaaccgtttgaggttttttcttaacgggttaactgattacttgatagtaaattaaaatattatatttatattattttatgtatagggaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="92328" stop="91215"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92032" g_stop="91920" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="113" r_length="113" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="91919" i_stop="91850" i_length="70">
            <donor d_prob="0.889" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91849" g_stop="91518" g_length="332"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="445" r_length="332" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="452" polyA_stop="465"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E732796" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>445</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E732796" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92032" e_stop="91920"/>
          <exon e_start="91849" e_stop="91518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTCCCCACGTCCTAGCTTTAGTCCCTGAAGCTGTTCGTAGAGATGTTGCAGAGTCGGTTAGATACTGAACCTAATCTCTCTTGCGAAGGAGTTTAACAAAACTAATCTTTCTGCAATTTTGAGCAGGTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTAAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGGGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAATTGATTACTTGATAGTAAATTAAAATATTATATTTATATTATTTTATGT</genome_strand>
        <mrna_strand>GGCCTTGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTCCCCACGTCCTAGCTTTAGTCCCTGAAGCTGTTCGTAGAGATGTTGCAGAGTCG......................................................................GTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTGAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGAGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAACTGATTACTTGATAGTAAATTAAAATATTATATTTATATTATTTTATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E392901" ref_strand="+" ref_description="SGN-E392901 [TUS-37-A9](-)">
      <seq>tacaactataggggtgcatggtgattaacactagttatcataactgataatccgaactaaaaaaaagttattatcagtttattgatttagcgattttgataatgttttgattttattgcttatcgagttatcttttcttaaccgtttgaggttttttcttaacgggttaactgattacttgatagtaaattaaaatattatatttatattaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="92036" stop="91226"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91736" g_stop="91527" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="210" r_length="210" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="211" polyA_stop="221"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E392901" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>210</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392901" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91736" e_stop="91527"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGGGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAATTGATTACTTGATAGTAAATTAAAATATTATATTTATATT</genome_strand>
        <mrna_strand>TACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGAGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAACTGATTACTTGATAGTAAATTAAAATATTATATTTATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E313005" ref_strand="+" ref_description="SGN-E313005 [cTOA-14-D18]">
      <seq>ttaatttactatcaagtaatcagttaacccgttaagaaaaaacctcaaacggttaagaaaagataactcgataagcaataaaatcaaaacattatcaaaatcgctaaatcaataaactgataataacttttttttagttcggattatcagttatgataactagtggtaatcaccatgcacccctatagttgtagtaactggtcagactaataag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="91244" stop="92057"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91544" g_stop="91757" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="214" r_length="214" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E313005" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>214</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E313005" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91544" e_stop="91757"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATTTACTATCAAGTAATCAATTAACCCGTTAAGAAAAAACCTCAAACGGTTAAGAAAAGATAACCCGATAAGCAATAAAATCAAAACATTATCAAAATCGCTAAATCAATAAACTGATAATAACTTTTTTTTAGTTCGGATTATCAGTTATGATAACTAGTGTTAATCACCATGCACCCCTATAGTTGTAGTAACTGTTCAGACTAATAAG</genome_strand>
        <mrna_strand>TTAATTTACTATCAAGTAATCAGTTAACCCGTTAAGAAAAAACCTCAAACGGTTAAGAAAAGATAACTCGATAAGCAATAAAATCAAAACATTATCAAAATCGCTAAATCAATAAACTGATAATAACTTTTTTTTAGTTCGGATTATCAGTTATGATAACTAGTGGTAATCACCATGCACCCCTATAGTTGTAGTAACTGGTCAGACTAATAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E550096" ref_strand="+" ref_description="SGN-E550096 [TUS-5-C28](-)">
      <seq>agagtggagaattcacatgctacccatagagttcctgttgatcactgtctttccagttattgatatgagattgagatgtaaaaccagaggagtcgagtacccaccgggggtccccaatactgtttctaaggttcttgaactcgacataataagatgggagcttcaggggttggatgatgtgctgaagccatctgagttctcacttggtgtaaaaggctctctttaccccgacagaaatggaccacggaccaggctgaaaggtcaactacagatgagtattagctttgttcttccccacgtcgtagctttagtccctgaagctgttcgtagagatgttgcagagtcggtgctaaggggactactgaggagcatgaagagtaaagtgaacggtagcttgctcacagactatgccgaattcaagagggaaatgcagaacaacttattagtctgaacagttactacaactataggggtgcatggtgattaacactagttatcataactgataatccgaactaaaaaaaagttattatcagtttattgatttagcgattttgataaggttaagattttattgcttatcgagttatcttttcttaaccgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="92640" stop="91292"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92340" g_stop="92193" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92192" i_stop="92118" i_length="75">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92117" g_stop="91920" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="346" r_length="198" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91919" i_stop="91850" i_length="70">
            <donor d_prob="0.889" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91849" g_stop="91592" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="604" r_length="258" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E550096" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550096" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92340" e_stop="92193"/>
          <exon e_start="92117" e_stop="91920"/>
          <exon e_start="91849" e_stop="91592"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGTGGAGAATTCACATGCTACCCATAGAGTTCCTGTTGATCACTGTCTTTCCAGTTATTGATATGAGATTGAGATGTAAAACCAGAGGAGTCGAGTACCCACCGGGGGTCCCCAATACTGTTTCTAAGGTTCTTGAACTCGACATAGTAAGTGTCAAACCTTAATAATCATATATACATTTGTTGTCTTTGTTGTGGAGTTGAAGCCACATAAATATGCAGATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTCCCCACGTCCTAGCTTTAGTCCCTGAAGCTGTTCGTAGAGATGTTGCAGAGTCGGTTAGATACTGAACCTAATCTCTCTTGCGAAGGAGTTTAACAAAACTAATCTTTCTGCAATTTTGAGCAGGTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTAAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGGGTTATCTTTTCTTAACCGT</genome_strand>
        <mrna_strand>AGAGTGGAGAATTCACATGCTACCCATAGAGTTCCTGTTGATCACTGTCTTTCCAGTTATTGATATGAGATTGAGATGTAAAACCAGAGGAGTCGAGTACCCACCGGGGGTCCCCAATACTGTTTCTAAGGTTCTTGAACTCGACATA...........................................................................ATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTCCCCACGTCGTAGCTTTAGTCCCTGAAGCTGTTCGTAGAGATGTTGCAGAGTCG......................................................................GTGCTAAGGGGACTACTGAGGAGCATGAAGAGTAAAGTGAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAAGGTTAAGATTTTATTGCTTATCGAGTTATCTTTTCTTAACCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E550297" ref_strand="+" ref_description="SGN-E550297 [TUS-5-C28]">
      <seq>ttctttcctcaacaatttcttcgtccccaaattaaatgaaaaaggaaaattcttcttccgccaacaattgattgtgaaatctcagattatagataatgctacaacttacacttgcagaattagcactgatattcctctctatgaaaaccccagggcttgctttgatcgatatttggagaataagcctcgagtgttcaaggccatttttcctgacaaaagaagaagtcaccaactcaatcaggaagagtggagaattcacatgctacccatagagttcctgttgatcactgtctttccagttattgatatgagattgagatgtaaaaccagaggagtcgagtacccaccgggggtccccaatactgtttctaaggttcttgaactcgacataataagatgggagcttcaggggttggatgatgtgctgaagccatctgagttctcacttggtgtaaaaggctctctttaccccgacagaaatggaccacggaccaggctgaaaggtcaactacagatgagtattagctttgttcttccccacgtcctagctttagtccctgaagctgttcgtagagatgttgcagagtcggtgctaaggggactactgcagaacatgaagagtaaagtgaacggtagcttgctcacagactatgccgaattncagagggaaatgcagaacaacttattagtctgaacagttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="94207" stop="91436"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93907" g_stop="93754" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93753" i_stop="93678" i_length="76">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93677" g_stop="93591" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="241" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93590" i_stop="92343" i_length="1248">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92342" g_stop="92193" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="391" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="92192" i_stop="92118" i_length="75">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92117" g_stop="91920" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="589" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91919" i_stop="91850" i_length="70">
            <donor d_prob="0.889" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="91849" g_stop="91736" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="703" r_length="114" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E550297" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550297" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93907" e_stop="93754"/>
          <exon e_start="93677" e_stop="93591"/>
          <exon e_start="92342" e_stop="92193"/>
          <exon e_start="92117" e_stop="91920"/>
          <exon e_start="91849" e_stop="91736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCACTCTATGAAAACCCCAGGGTATTATTCAACTTTTCAATTTTTAAACATTATCTACTTGTAAATCAATTAAGTTGAATCATTGAATTTTGAGCAGGCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAGGTATTCATCACCAATAATTTGTTTTCTACTCCATGGGGAAATACTTAATTTATGAACTAATTTTAGCATCCTTTTATATCTTGTTTGGTTACTAACATATCTGAATTAGTTACCTCTGCCTTGAAAGTGAGTGGGGTAGTAGTAATGGGATTAGTTATCTCGAGATAAAACAATGAAAAATGACAAAAACACCCCTGAGGTCCTTCGAGGAAGGGTATCTTTGTAAACAAATAATTTGTTGGAAATTATGCAAACTTGTTTTCAACCAAATGGCCCCTTCGAGTTAGAGTTAAGAGGCCACAGGTCCATTTTTTCAACTGAGTATCCGTTTCTGTTCTTGGTTTATCCAATGTTGAGCCCACATTTTATATTGACCAAGTCTCATAGGTTGGGTCCTGGGATGTTGGAGGGGTTAAAGGTTGGTAAGTGTATCGCACATTGATTGAGGAATTGGTTCGTTATATGGCGCGGACAACATGAGCTAGTACAAGGTCCACTTTCATAAAATGAATTCCCAAATTCATCTTTTAATCTCTTTTGTGTTTTGTTTGTTTGTGTGCTAATTGAGCACCAACATGTCACTTGTCTGAAATTCTGCTCTTCAGTTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGAGGTTGTCCTGTTTCGTTGCATCTCCGCTTCAAGGCAATCAGGTTCCTTAGACGCTCTATTCTTCTGAGTTCACTATTTTAGGTTATACTAAACTACTCTCGACCGTTACAAAGTATGTTGGCTATCTAACTGATTAGACGTTGATGAATGCCACAATTTGAAGTTTGAGCTGAATGTACACTTTCAGAAACACAAATGAATTAGATAAGTTGTCTTTACTTTGACAGAACTTGCCAAAAAAAGTTATTTTTTCCTCTTTTAATGTCGAGATGGAATGGTCGGGGATCTCGTTTCAGTATTAAAAACATGCATTTTTATATATGCTCGACTACTAATTCCACGCAGGAAGAGTGGAGAATTCACATGCTACCCATAGAGTTCCTGTTGATCACTGTCTTTCCAGTTATTGATATGAGATTGAGATGTAAAACCAGAGGAGTCGAGTACCCACCGGGGGTCCCCAATACTGTTTCTAAGGTTCTTGAACTCGACATAGTAAGTGTCAAACCTTAATAATCATATATACATTTGTTGTCTTTGTTGTGGAGTTGAAGCCACATAAATATGCAGATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTCCCCACGTCCTAGCTTTAGTCCCTGAAGCTGTTCGTAGAGATGTTGCAGAGTCGGTTAGATACTGAACCTAATCTCTCTTGCGAAGGAGTTTAACAAAACTAATCTTTCTGCAATTTTGAGCAGGTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTAAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACT</genome_strand>
        <mrna_strand>TTCTTTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCTCTCTATGAAAACCCCAGG............................................................................GCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAGTGGAGAATTCACATGCTACCCATAGAGTTCCTGTTGATCACTGTCTTTCCAGTTATTGATATGAGATTGAGATGTAAAACCAGAGGAGTCGAGTACCCACCGGGGGTCCCCAATACTGTTTCTAAGGTTCTTGAACTCGACATA...........................................................................ATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTCCCCACGTCCTAGCTTTAGTCCCTGAAGCTGTTCGTAGAGATGTTGCAGAGTCG......................................................................GTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTGAACGGTAGCTTGCTCACAGACTATGCCGAATTNCAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E389743" ref_strand="+" ref_description="SGN-E389743 [TUS-4-C16]">
      <seq>ttcactcctcaacaatttcttcgtccccaaattaaatgaaaaaggaaaattcttcttccgccaacaattgattgtgaaatctcagattatagataatgctacaacttacacttgcagaattagcactgatattcctctctatgaaaaccccagggcttgctttgatcgatatttggagaataagcctcgagtgttcaaggccatttttcctgacaaaagaagaagtcaccaactcaatcaggaagagtggagaattcacatgctacccatagagttcctgttgatcactgtctttccagttattgatatgagattgagatgtaaaaccagaggagtcgagtacccaccgggggtccccaatactgtttctaaggttcttgaactcgacataataagatgggagcttcaggggttggatgatgtgctgaagccatctgagttctcacttggtgtaaaaggctctctttaccccgacagaaatggaccacggaccaggctgaaaggtcaactacagatgagtattagctttgttcttccccacgtcctagctttagtccctgaagctgttcgtagagatgttgcagagtcggtgctaaggggactactgcagaacatgaagagtaaagtggacggtagcttgctcacagactatgccgaaattcagagggaaatgcagaacaacttattagtctgaacag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="94207" stop="91441"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93907" g_stop="93754" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93753" i_stop="93678" i_length="76">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93677" g_stop="93591" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="241" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93590" i_stop="92343" i_length="1248">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92342" g_stop="92193" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="391" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="92192" i_stop="92118" i_length="75">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92117" g_stop="91920" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="589" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91919" i_stop="91850" i_length="70">
            <donor d_prob="0.889" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="91849" g_stop="91741" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="698" r_length="109" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E389743" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E389743" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93907" e_stop="93754"/>
          <exon e_start="93677" e_stop="93591"/>
          <exon e_start="92342" e_stop="92193"/>
          <exon e_start="92117" e_stop="91920"/>
          <exon e_start="91849" e_stop="91741"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCACTCTATGAAAACCCCAGGGTATTATTCAACTTTTCAATTTTTAAACATTATCTACTTGTAAATCAATTAAGTTGAATCATTGAATTTTGAGCAGGCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAGGTATTCATCACCAATAATTTGTTTTCTACTCCATGGGGAAATACTTAATTTATGAACTAATTTTAGCATCCTTTTATATCTTGTTTGGTTACTAACATATCTGAATTAGTTACCTCTGCCTTGAAAGTGAGTGGGGTAGTAGTAATGGGATTAGTTATCTCGAGATAAAACAATGAAAAATGACAAAAACACCCCTGAGGTCCTTCGAGGAAGGGTATCTTTGTAAACAAATAATTTGTTGGAAATTATGCAAACTTGTTTTCAACCAAATGGCCCCTTCGAGTTAGAGTTAAGAGGCCACAGGTCCATTTTTTCAACTGAGTATCCGTTTCTGTTCTTGGTTTATCCAATGTTGAGCCCACATTTTATATTGACCAAGTCTCATAGGTTGGGTCCTGGGATGTTGGAGGGGTTAAAGGTTGGTAAGTGTATCGCACATTGATTGAGGAATTGGTTCGTTATATGGCGCGGACAACATGAGCTAGTACAAGGTCCACTTTCATAAAATGAATTCCCAAATTCATCTTTTAATCTCTTTTGTGTTTTGTTTGTTTGTGTGCTAATTGAGCACCAACATGTCACTTGTCTGAAATTCTGCTCTTCAGTTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGAGGTTGTCCTGTTTCGTTGCATCTCCGCTTCAAGGCAATCAGGTTCCTTAGACGCTCTATTCTTCTGAGTTCACTATTTTAGGTTATACTAAACTACTCTCGACCGTTACAAAGTATGTTGGCTATCTAACTGATTAGACGTTGATGAATGCCACAATTTGAAGTTTGAGCTGAATGTACACTTTCAGAAACACAAATGAATTAGATAAGTTGTCTTTACTTTGACAGAACTTGCCAAAAAAAGTTATTTTTTCCTCTTTTAATGTCGAGATGGAATGGTCGGGGATCTCGTTTCAGTATTAAAAACATGCATTTTTATATATGCTCGACTACTAATTCCACGCAGGAAGAGTGGAGAATTCACATGCTACCCATAGAGTTCCTGTTGATCACTGTCTTTCCAGTTATTGATATGAGATTGAGATGTAAAACCAGAGGAGTCGAGTACCCACCGGGGGTCCCCAATACTGTTTCTAAGGTTCTTGAACTCGACATAGTAAGTGTCAAACCTTAATAATCATATATACATTTGTTGTCTTTGTTGTGGAGTTGAAGCCACATAAATATGCAGATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTCCCCACGTCCTAGCTTTAGTCCCTGAAGCTGTTCGTAGAGATGTTGCAGAGTCGGTTAGATACTGAACCTAATCTCTCTTGCGAAGGAGTTTAACAAAACTAATCTTTCTGCAATTTTGAGCAGGTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTAAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAG</genome_strand>
        <mrna_strand>TTCACTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCTCTCTATGAAAACCCCAGG............................................................................GCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAGTGGAGAATTCACATGCTACCCATAGAGTTCCTGTTGATCACTGTCTTTCCAGTTATTGATATGAGATTGAGATGTAAAACCAGAGGAGTCGAGTACCCACCGGGGGTCCCCAATACTGTTTCTAAGGTTCTTGAACTCGACATA...........................................................................ATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTCCCCACGTCCTAGCTTTAGTCCCTGAAGCTGTTCGTAGAGATGTTGCAGAGTCG......................................................................GTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTGGACGGTAGCTTGCTCACAGACTATGCCGAAATTCAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E396025" ref_strand="+" ref_description="SGN-E396025 [TUS-18-J14]">
      <seq>ttcattcctcaacaatttcttcgtccccaaattaaatgaaaaaggaaaattcttcttccgccaacaattgattgtgaaatctcagattatagataatgctacaacttacacttgcagaattagcactgatattcctctctatgaaaaccccagggcttgctttgatcgatatttggagaataagcctcgagtgttcaaggccatttttcctgacaaaagaagaagtcaccaactcaatcaggaagagtggagaattcacatgctacccatagagttcctgttgatcactgtctttccagttattgatatgagattgagatgtaaaaccagaggagtcgagtacccaccgggggtccccaatactgtttctaaggttcttgaactcgacataataagatgggagcttcaggggttggatgatgtgctgaagccatctgagttctcacttggtgtaaaaggctctctttaccccgacagaaatggaccacggaccaggctgaaaggtcaactacagatgagtattagctttgttcttccccacgtcctagctttagtccctgaagctgttcgtaaagaatgttgcaaaatcggtgctaagggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="94207" stop="91618"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93907" g_stop="93754" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93753" i_stop="93678" i_length="76">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93677" g_stop="93591" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="241" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93590" i_stop="92343" i_length="1248">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92342" g_stop="92193" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="391" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="92192" i_stop="92118" i_length="75">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92117" g_stop="91920" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="590" r_length="199" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="91919" i_stop="91850" i_length="70">
            <donor d_prob="0.889" d_score="0.90"/>
            <acceptor a_prob="0.987" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="91849" g_stop="91839" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="601" r_length="11" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E396025" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>600</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E396025" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93907" e_stop="93754"/>
          <exon e_start="93677" e_stop="93591"/>
          <exon e_start="92342" e_stop="92193"/>
          <exon e_start="92117" e_stop="91920"/>
          <exon e_start="91849" e_stop="91839"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCACTCTATGAAAACCCCAGGGTATTATTCAACTTTTCAATTTTTAAACATTATCTACTTGTAAATCAATTAAGTTGAATCATTGAATTTTGAGCAGGCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAGGTATTCATCACCAATAATTTGTTTTCTACTCCATGGGGAAATACTTAATTTATGAACTAATTTTAGCATCCTTTTATATCTTGTTTGGTTACTAACATATCTGAATTAGTTACCTCTGCCTTGAAAGTGAGTGGGGTAGTAGTAATGGGATTAGTTATCTCGAGATAAAACAATGAAAAATGACAAAAACACCCCTGAGGTCCTTCGAGGAAGGGTATCTTTGTAAACAAATAATTTGTTGGAAATTATGCAAACTTGTTTTCAACCAAATGGCCCCTTCGAGTTAGAGTTAAGAGGCCACAGGTCCATTTTTTCAACTGAGTATCCGTTTCTGTTCTTGGTTTATCCAATGTTGAGCCCACATTTTATATTGACCAAGTCTCATAGGTTGGGTCCTGGGATGTTGGAGGGGTTAAAGGTTGGTAAGTGTATCGCACATTGATTGAGGAATTGGTTCGTTATATGGCGCGGACAACATGAGCTAGTACAAGGTCCACTTTCATAAAATGAATTCCCAAATTCATCTTTTAATCTCTTTTGTGTTTTGTTTGTTTGTGTGCTAATTGAGCACCAACATGTCACTTGTCTGAAATTCTGCTCTTCAGTTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGAGGTTGTCCTGTTTCGTTGCATCTCCGCTTCAAGGCAATCAGGTTCCTTAGACGCTCTATTCTTCTGAGTTCACTATTTTAGGTTATACTAAACTACTCTCGACCGTTACAAAGTATGTTGGCTATCTAACTGATTAGACGTTGATGAATGCCACAATTTGAAGTTTGAGCTGAATGTACACTTTCAGAAACACAAATGAATTAGATAAGTTGTCTTTACTTTGACAGAACTTGCCAAAAAAAGTTATTTTTTCCTCTTTTAATGTCGAGATGGAATGGTCGGGGATCTCGTTTCAGTATTAAAAACATGCATTTTTATATATGCTCGACTACTAATTCCACGCAGGAAGAGTGGAGAATTCACATGCTACCCATAGAGTTCCTGTTGATCACTGTCTTTCCAGTTATTGATATGAGATTGAGATGTAAAACCAGAGGAGTCGAGTACCCACCGGGGGTCCCCAATACTGTTTCTAAGGTTCTTGAACTCGACATAGTAAGTGTCAAACCTTAATAATCATATATACATTTGTTGTCTTTGTTGTGGAGTTGAAGCCACATAAATATGCAGATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTCCCCACGTCCTAGCTTTAGTCCCTGAAGCTGTTCGTAGAG-ATGTTGCAGAGTCGGTTAGATACTGAACCTAATCTCTCTTGCGAAGGAGTTTAACAAAACTAATCTTTCTGCAATTTTGAGCAGGTGCTAAGGGG</genome_strand>
        <mrna_strand>TTCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCTCTCTATGAAAACCCCAGG............................................................................GCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAGTGGAGAATTCACATGCTACCCATAGAGTTCCTGTTGATCACTGTCTTTCCAGTTATTGATATGAGATTGAGATGTAAAACCAGAGGAGTCGAGTACCCACCGGGGGTCCCCAATACTGTTTCTAAGGTTCTTGAACTCGACATA...........................................................................ATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTCCCCACGTCCTAGCTTTAGTCCCTGAAGCTGTTCGTAAAGAATGTTGCAAAATCG......................................................................GTGCTAAGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E231612" ref_strand="+" ref_description="SGN-E231612 [cLED-4-C23]">
      <seq>tcattcctcaacaatttcttcgtccccaaattaaatgaaaaaggaaaattcttcttccgccaacaattgattgtgaaatctcagattatagataatgctacaacttacacttgcagaattagcactgatattcctctctatgaaaaccccagggcttgctttgatcgatatttggagaataagcctcgagtgttcaaggccatttttcctgacaaaagaagaagtcaccaactcaatcaggaagagtggagaattcacatgctacccatagagttcctgttgatcactgtctttccagttattgatatgagattgagatgtaaaaccagaggagtcgagtacccaccgggggtccccaatactgtttctaaggttcttgaactcgacataataagatgggagcttcaggggttggatgatgtgctgaagccatctgagttctcacttggtgtaaaaggctctctttaccccgacagaaatggaccacggaccaggctgaaaggtcaactacagatgagtattagctttgttcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="94206" stop="91673"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93906" g_stop="93754" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="153" r_length="153" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93753" i_stop="93678" i_length="76">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93677" g_stop="93591" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="240" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93590" i_stop="92343" i_length="1248">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92342" g_stop="92193" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="390" r_length="150" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="92192" i_stop="92118" i_length="75">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92117" g_stop="91973" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="535" r_length="145" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E231612" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231612" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93906" e_stop="93754"/>
          <exon e_start="93677" e_stop="93591"/>
          <exon e_start="92342" e_stop="92193"/>
          <exon e_start="92117" e_stop="91973"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCACTCTATGAAAACCCCAGGGTATTATTCAACTTTTCAATTTTTAAACATTATCTACTTGTAAATCAATTAAGTTGAATCATTGAATTTTGAGCAGGCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAGGTATTCATCACCAATAATTTGTTTTCTACTCCATGGGGAAATACTTAATTTATGAACTAATTTTAGCATCCTTTTATATCTTGTTTGGTTACTAACATATCTGAATTAGTTACCTCTGCCTTGAAAGTGAGTGGGGTAGTAGTAATGGGATTAGTTATCTCGAGATAAAACAATGAAAAATGACAAAAACACCCCTGAGGTCCTTCGAGGAAGGGTATCTTTGTAAACAAATAATTTGTTGGAAATTATGCAAACTTGTTTTCAACCAAATGGCCCCTTCGAGTTAGAGTTAAGAGGCCACAGGTCCATTTTTTCAACTGAGTATCCGTTTCTGTTCTTGGTTTATCCAATGTTGAGCCCACATTTTATATTGACCAAGTCTCATAGGTTGGGTCCTGGGATGTTGGAGGGGTTAAAGGTTGGTAAGTGTATCGCACATTGATTGAGGAATTGGTTCGTTATATGGCGCGGACAACATGAGCTAGTACAAGGTCCACTTTCATAAAATGAATTCCCAAATTCATCTTTTAATCTCTTTTGTGTTTTGTTTGTTTGTGTGCTAATTGAGCACCAACATGTCACTTGTCTGAAATTCTGCTCTTCAGTTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGAGGTTGTCCTGTTTCGTTGCATCTCCGCTTCAAGGCAATCAGGTTCCTTAGACGCTCTATTCTTCTGAGTTCACTATTTTAGGTTATACTAAACTACTCTCGACCGTTACAAAGTATGTTGGCTATCTAACTGATTAGACGTTGATGAATGCCACAATTTGAAGTTTGAGCTGAATGTACACTTTCAGAAACACAAATGAATTAGATAAGTTGTCTTTACTTTGACAGAACTTGCCAAAAAAAGTTATTTTTTCCTCTTTTAATGTCGAGATGGAATGGTCGGGGATCTCGTTTCAGTATTAAAAACATGCATTTTTATATATGCTCGACTACTAATTCCACGCAGGAAGAGTGGAGAATTCACATGCTACCCATAGAGTTCCTGTTGATCACTGTCTTTCCAGTTATTGATATGAGATTGAGATGTAAAACCAGAGGAGTCGAGTACCCACCGGGGGTCCCCAATACTGTTTCTAAGGTTCTTGAACTCGACATAGTAAGTGTCAAACCTTAATAATCATATATACATTTGTTGTCTTTGTTGTGGAGTTGAAGCCACATAAATATGCAGATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTC</genome_strand>
        <mrna_strand>TCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCTCTCTATGAAAACCCCAGG............................................................................GCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAGTGGAGAATTCACATGCTACCCATAGAGTTCCTGTTGATCACTGTCTTTCCAGTTATTGATATGAGATTGAGATGTAAAACCAGAGGAGTCGAGTACCCACCGGGGGTCCCCAATACTGTTTCTAAGGTTCTTGAACTCGACATA...........................................................................ATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E235280" ref_strand="+" ref_description="SGN-E235280 [cLED-11-K11]">
      <seq>aaaaggaaaattcttcttccgccaacaattgattgtgaaatctcagattatagataatgctacaacttacacttgcagaattagcactgatattcctctctatgaaaaccccagggcttgctttgatcgatatttggagaataagcctcgagtgttcaaggccatttttcctgacaaaagaagaagtcaccaactcaatcagttttcaggccttgaaccatgaagataggcacttgctatttctttacacaaggtcatagttcaatgaaagtcaacttgtttagctcatgtccgatattactatgatgatgagtctttgactcgtatgttatattcgtcctaacatcagtatttataaatctgagtctcttgttgatgaacacaatatctgttcggaaaacaaagtgaagaatgtagttcagcaaacaaagatatcggggttttaagtaggtcccatgttagttctacttccggaagaagtttgagcaattcagctgtgaggttgtcctgtttcgttgcatctccgcttcaaggcaatcaggaagagtggagaattcacatgctacccatagagttcctgttgatcactgtctttccagttattgatatgagatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="94168" stop="91969"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93868" g_stop="93754" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93753" i_stop="93678" i_length="76">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93677" g_stop="93591" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="202" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93590" i_stop="92986" i_length="605">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.696" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92985" g_stop="92647" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="541" r_length="339" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="92646" i_stop="92343" i_length="304">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="92342" g_stop="92269" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="615" r_length="74" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E235280" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235280" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93868" e_stop="93754"/>
          <exon e_start="93677" e_stop="93591"/>
          <exon e_start="92985" e_stop="92647"/>
          <exon e_start="92342" e_stop="92269"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCACTCTATGAAAACCCCAGGGTATTATTCAACTTTTCAATTTTTAAACATTATCTACTTGTAAATCAATTAAGTTGAATCATTGAATTTTGAGCAGGCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAGGTATTCATCACCAATAATTTGTTTTCTACTCCATGGGGAAATACTTAATTTATGAACTAATTTTAGCATCCTTTTATATCTTGTTTGGTTACTAACATATCTGAATTAGTTACCTCTGCCTTGAAAGTGAGTGGGGTAGTAGTAATGGGATTAGTTATCTCGAGATAAAACAATGAAAAATGACAAAAACACCCCTGAGGTCCTTCGAGGAAGGGTATCTTTGTAAACAAATAATTTGTTGGAAATTATGCAAACTTGTTTTCAACCAAATGGCCCCTTCGAGTTAGAGTTAAGAGGCCACAGGTCCATTTTTTCAACTGAGTATCCGTTTCTGTTCTTGGTTTATCCAATGTTGAGCCCACATTTTATATTGACCAAGTCTCATAGGTTGGGTCCTGGGATGTTGGAGGGGTTAAAGGTTGGTAAGTGTATCGCACATTGATTGAGGAATTGGTTCGTTATATGGCGCGGACAACATGAGCTAGTACAAGGTCCACTTTCATAAAATGAATTCCCAAATTCATCTTTTAATCTCTTTTGTGTTTTGTTTGTTTGTGTGCTAATTGAGCACCAACATGTCACTTGTCTGAAATTCTGCTCTTCAGTTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGAGGTTGTCCTGTTTCGTTGCATCTCCGCTTCAAGGCAATCAGGTTCCTTAGACGCTCTATTCTTCTGAGTTCACTATTTTAGGTTATACTAAACTACTCTCGACCGTTACAAAGTATGTTGGCTATCTAACTGATTAGACGTTGATGAATGCCACAATTTGAAGTTTGAGCTGAATGTACACTTTCAGAAACACAAATGAATTAGATAAGTTGTCTTTACTTTGACAGAACTTGCCAAAAAAAGTTATTTTTTCCTCTTTTAATGTCGAGATGGAATGGTCGGGGATCTCGTTTCAGTATTAAAAACATGCATTTTTATATATGCTCGACTACTAATTCCACGCAGGAAGAGTGGAGAATTCACATGCTACCCATAGAGTTCCTGTTGATCACTGTCTTTCCAGTTATTGATATGAGATT</genome_strand>
        <mrna_strand>AAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCTCTCTATGAAAACCCCAGG............................................................................GCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGAGGTTGTCCTGTTTCGTTGCATCTCCGCTTCAAGGCAATCAG................................................................................................................................................................................................................................................................................................................GAAGAGTGGAGAATTCACATGCTACCCATAGAGTTCCTGTTGATCACTGTCTTTCCAGTTATTGATATGAGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E327930" ref_strand="+" ref_description="SGN-E327930 [cTOC-22-F15]">
      <seq>aacatgtcacttgtctgaaattctgctcttcagttttcaggccttgaaccatgaagataggcacttgctatttctttacacaaggtcatagttcaatgaaagtcaacttgtttagctcatgtccgatattactatgatgatgagtctttgactcgtatgttatattcgtcctaacatcagtatttataaatctgagtctcttgttgatgaacacaatatctgttcggaaaacaaagtgaagaatgtagttcagcaaacaaagatatcggggttttaagtaggtcccatgttagttctacttccggaagaagtttgagcaattcagctgtgaggttgtcctgtttcgttgcatctccgcttcaaggcaatcaggttccttagacgctctattcttctgagttcactattttaggttatactaaactactctcgaccgttacaaagtatgttggctatctaactgattagacgttgatgaatgccacaatttgaagtttgagctgaatgtacactttcagaaacacaaatgaattagataagttgtctttactttgacagaacttgccaaaaaaagttattttttcctcttttaatgtcgagatggaatggtcggggatctcgtttcagtattaaaaacatgcatttttatatatgctcgactactaattccacgcaggaagagtggagaattcacatgctacccatagaagtcctgttgatcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="93318" stop="91995"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93018" g_stop="92295" g_length="724"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="724" r_length="724" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E327930" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327930" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93018" e_stop="92295"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACATGTCACTTGTCTGAAATTCTGCTCTTCAGTTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGAGGTTGTCCTGTTTCGTTGCATCTCCGCTTCAAGGCAATCAGGTTCCTTAGACGCTCTATTCTTCTGAGTTCACTATTTTAGGTTATACTAAACTACTCTCGACCGTTACAAAGTATGTTGGCTATCTAACTGATTAGACGTTGATGAATGCCACAATTTGAAGTTTGAGCTGAATGTACACTTTCAGAAACACAAATGAATTAGATAAGTTGTCTTTACTTTGACAGAACTTGCCAAAAAAAGTTATTTTTTCCTCTTTTAATGTCGAGATGGAATGGTCGGGGATCTCGTTTCAGTATTAAAAACATGCATTTTTATATATGCTCGACTACTAATTCCACGCAGGAAGAGTGGAGAATTCACATGCTACCCATAGAGTTCCTGTTGATCACT</genome_strand>
        <mrna_strand>AACATGTCACTTGTCTGAAATTCTGCTCTTCAGTTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGAGGTTGTCCTGTTTCGTTGCATCTCCGCTTCAAGGCAATCAGGTTCCTTAGACGCTCTATTCTTCTGAGTTCACTATTTTAGGTTATACTAAACTACTCTCGACCGTTACAAAGTATGTTGGCTATCTAACTGATTAGACGTTGATGAATGCCACAATTTGAAGTTTGAGCTGAATGTACACTTTCAGAAACACAAATGAATTAGATAAGTTGTCTTTACTTTGACAGAACTTGCCAAAAAAAGTTATTTTTTCCTCTTTTAATGTCGAGATGGAATGGTCGGGGATCTCGTTTCAGTATTAAAAACATGCATTTTTATATATGCTCGACTACTAATTCCACGCAGGAAGAGTGGAGAATTCACATGCTACCCATAGAAGTCCTGTTGATCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E242589" ref_strand="+" ref_description="SGN-E242589 [cLED-30-D14]">
      <seq>cgcacattgattgaggaattggttcgttatatggcgcggacaacatgagctagtacaaggtccactttcataaaatgaattcccaaattcatcttttaatctcttttgtgttttgtttgtttgtgtgctaattgagcaccaacatgtcacttgtctgaaattctgctcttcagttttcaggccttgaaccatgaagataggcacttgctatttctttacacaaggtcatagttcaatgaaagtcaacttgtttagctcatgtccgatattactatgatgatgagtctttgactcgtatgttatattcgtcctaacatcagtatttataaatctgagtctcttgttgatgaacacaatatctgttcggaaaacaaagtgaagaatgtagttcagcaaacaaagatatcggggttttaagtaggtcccatgttagttctacttccggaagaagtttgagcaattcagctgtgaggttgtcctgtttcgttgcatctccgcttcaaggcaatcaggttccttagacgctctattcttctgagttcactattttaggttattctaaactactctcgaccggtacaaaatatgttggctatctaactgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="93458" stop="92254"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93158" g_stop="92554" g_length="605"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="605" r_length="605" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E242589" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>605</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242589" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93158" e_stop="92554"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCACATTGATTGAGGAATTGGTTCGTTATATGGCGCGGACAACATGAGCTAGTACAAGGTCCACTTTCATAAAATGAATTCCCAAATTCATCTTTTAATCTCTTTTGTGTTTTGTTTGTTTGTGTGCTAATTGAGCACCAACATGTCACTTGTCTGAAATTCTGCTCTTCAGTTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGAGGTTGTCCTGTTTCGTTGCATCTCCGCTTCAAGGCAATCAGGTTCCTTAGACGCTCTATTCTTCTGAGTTCACTATTTTAGGTTATACTAAACTACTCTCGACCGTTACAAAGTATGTTGGCTATCTAACTGAT</genome_strand>
        <mrna_strand>CGCACATTGATTGAGGAATTGGTTCGTTATATGGCGCGGACAACATGAGCTAGTACAAGGTCCACTTTCATAAAATGAATTCCCAAATTCATCTTTTAATCTCTTTTGTGTTTTGTTTGTTTGTGTGCTAATTGAGCACCAACATGTCACTTGTCTGAAATTCTGCTCTTCAGTTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGAGGTTGTCCTGTTTCGTTGCATCTCCGCTTCAAGGCAATCAGGTTCCTTAGACGCTCTATTCTTCTGAGTTCACTATTTTAGGTTATTCTAAACTACTCTCGACCGGTACAAAATATGTTGGCTATCTAACTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E392902" ref_strand="+" ref_description="SGN-E392902 [TUS-37-A9]">
      <seq>tcgcacattgattgaggaattggttcgttatatggcgcggacaacatgagctagtacaaggtccactttcataaaatgaattcccaaattcatcttttaatctcttttgtgttttgtttgtttgtgtgctaattgagcaccaacatgtcacttgtctgaaattctgctcttcagttttcaggccttgaaccatgaagataggcacttgctatttctttacacaaggtcatagttcaatgaaagtcaacttgtttagctcatgtccgatattactatgatgatgagtctttgactcgtatgttatattcgtcctaacatcagtatttataaatctgagtctcttgttgatgaacacaatatctgttcggaaaacaaagtgaagaatgtagttcagcaaacaaagatatcggggttttaagtaggtcccatgttagttctacttccggaagaagtttgagcaattcagctgtgaggttgtcctgtttcgttgcatctccgcttcaaggcaatcaggttccttagacgctctattcttctgagttcactattttaagttatactaaactactctcgaccgttacaaagtatgtttgctatctaactga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="93459" stop="92255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93159" g_stop="92555" g_length="605"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="605" r_length="605" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E392902" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>605</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392902" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93159" e_stop="92555"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGCACATTGATTGAGGAATTGGTTCGTTATATGGCGCGGACAACATGAGCTAGTACAAGGTCCACTTTCATAAAATGAATTCCCAAATTCATCTTTTAATCTCTTTTGTGTTTTGTTTGTTTGTGTGCTAATTGAGCACCAACATGTCACTTGTCTGAAATTCTGCTCTTCAGTTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGAGGTTGTCCTGTTTCGTTGCATCTCCGCTTCAAGGCAATCAGGTTCCTTAGACGCTCTATTCTTCTGAGTTCACTATTTTAGGTTATACTAAACTACTCTCGACCGTTACAAAGTATGTTGGCTATCTAACTGA</genome_strand>
        <mrna_strand>TCGCACATTGATTGAGGAATTGGTTCGTTATATGGCGCGGACAACATGAGCTAGTACAAGGTCCACTTTCATAAAATGAATTCCCAAATTCATCTTTTAATCTCTTTTGTGTTTTGTTTGTTTGTGTGCTAATTGAGCACCAACATGTCACTTGTCTGAAATTCTGCTCTTCAGTTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGAGGTTGTCCTGTTTCGTTGCATCTCCGCTTCAAGGCAATCAGGTTCCTTAGACGCTCTATTCTTCTGAGTTCACTATTTTAAGTTATACTAAACTACTCTCGACCGTTACAAAGTATGTTTGCTATCTAACTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E236370" ref_strand="+" ref_description="SGN-E236370 [cLED-13-C6]">
      <seq>cgcacattgattgaggaattggttcgttatatggcgcggacaacatgagctagtacaaggtccactttcataaaatgaattcccaaattcatcttttaatctcttttgtgttttgtttgtttgtgtgctaattgagcaccaacatgtcacttgtctgaaattctgctcttcagttttcaggccttgaaccatgaagataggcacttgctatttctttacacaaggtcatagttcaatgaaagtcaacttgtttagctcatgtccgatattactatgatgatgagtctttgactcgtatgttatattcgtcctaacatcagtatttataaatctgagtctcttgttgatgaacacaatatctgttcggaaaacaaagtgaagaatgtagttcagcaaacaaagatatcggggttttaagtaggtcccatgttagttctacttccggaagaagtttgagcaattcagctgtgaggttgtcctgtttcgttgcatctccgcttcaaggcaatcaggttccttagacgctctattcttctgagttcactattttaggttatactaaactactctcgaccgntacaaagtatgttggctatctaactga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="93458" stop="92255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93158" g_stop="92555" g_length="604"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="604" r_length="604" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E236370" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E236370" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93158" e_stop="92555"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCACATTGATTGAGGAATTGGTTCGTTATATGGCGCGGACAACATGAGCTAGTACAAGGTCCACTTTCATAAAATGAATTCCCAAATTCATCTTTTAATCTCTTTTGTGTTTTGTTTGTTTGTGTGCTAATTGAGCACCAACATGTCACTTGTCTGAAATTCTGCTCTTCAGTTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGAGGTTGTCCTGTTTCGTTGCATCTCCGCTTCAAGGCAATCAGGTTCCTTAGACGCTCTATTCTTCTGAGTTCACTATTTTAGGTTATACTAAACTACTCTCGACCGTTACAAAGTATGTTGGCTATCTAACTGA</genome_strand>
        <mrna_strand>CGCACATTGATTGAGGAATTGGTTCGTTATATGGCGCGGACAACATGAGCTAGTACAAGGTCCACTTTCATAAAATGAATTCCCAAATTCATCTTTTAATCTCTTTTGTGTTTTGTTTGTTTGTGTGCTAATTGAGCACCAACATGTCACTTGTCTGAAATTCTGCTCTTCAGTTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGAGGTTGTCCTGTTTCGTTGCATCTCCGCTTCAAGGCAATCAGGTTCCTTAGACGCTCTATTCTTCTGAGTTCACTATTTTAGGTTATACTAAACTACTCTCGACCGNTACAAAGTATGTTGGCTATCTAACTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E377105" ref_strand="+" ref_description="SGN-E377105 [TUS-21-O9]">
      <seq>aaaaggaaaattcttcttccgccaacaattgattgtgaaatctcagattatagataatgctacaacttacacttgcagaattagcactgatattcctctctatgaaaaccccagggcttgctttgatcgatatttggagaataagcctcgagtgttcaaggccatttttcctgacaaaagaagaagtcaccaactcaatcagttttcaggccttgaaccatgaagataggcacttgctatttctttacacaaggtcatagttcaatgaaagtcaacttgtttagctcatgtccgatattactatgatgatgagtctttgactcgtatgttatattcgtcctaacatcagtatttataaatctgagtctcttgttgatgaacacaatatctgttcggaaaacaaagtgaagaatgtagttcagcaaacaaagatatcggggttttaagtaggtcccatgttagttctacttccggaagaagtttgagcaattcagctgtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="94168" stop="92388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93868" g_stop="93754" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93753" i_stop="93678" i_length="76">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93677" g_stop="93591" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="202" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93590" i_stop="92986" i_length="605">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.696" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92985" g_stop="92688" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="500" r_length="298" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E377105" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377105" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93868" e_stop="93754"/>
          <exon e_start="93677" e_stop="93591"/>
          <exon e_start="92985" e_stop="92688"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCACTCTATGAAAACCCCAGGGTATTATTCAACTTTTCAATTTTTAAACATTATCTACTTGTAAATCAATTAAGTTGAATCATTGAATTTTGAGCAGGCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAGGTATTCATCACCAATAATTTGTTTTCTACTCCATGGGGAAATACTTAATTTATGAACTAATTTTAGCATCCTTTTATATCTTGTTTGGTTACTAACATATCTGAATTAGTTACCTCTGCCTTGAAAGTGAGTGGGGTAGTAGTAATGGGATTAGTTATCTCGAGATAAAACAATGAAAAATGACAAAAACACCCCTGAGGTCCTTCGAGGAAGGGTATCTTTGTAAACAAATAATTTGTTGGAAATTATGCAAACTTGTTTTCAACCAAATGGCCCCTTCGAGTTAGAGTTAAGAGGCCACAGGTCCATTTTTTCAACTGAGTATCCGTTTCTGTTCTTGGTTTATCCAATGTTGAGCCCACATTTTATATTGACCAAGTCTCATAGGTTGGGTCCTGGGATGTTGGAGGGGTTAAAGGTTGGTAAGTGTATCGCACATTGATTGAGGAATTGGTTCGTTATATGGCGCGGACAACATGAGCTAGTACAAGGTCCACTTTCATAAAATGAATTCCCAAATTCATCTTTTAATCTCTTTTGTGTTTTGTTTGTTTGTGTGCTAATTGAGCACCAACATGTCACTTGTCTGAAATTCTGCTCTTCAGTTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGA</genome_strand>
        <mrna_strand>AAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCTCTCTATGAAAACCCCAGG............................................................................GCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E246053" ref_strand="+" ref_description="SGN-E246053 [cLEF-54-K20]">
      <seq>catcatcttcattcctcaacaatttcttcgtccccaaattaaatgaaaaaggaaaattcttcttccgccaacaattgattgtgaaatctcagattatagataatgctacaacttacacttgcagaattagcactgatattcctctctatgaaaaccccagggcttgctttgatcgatatttggagaataagcctcgagtgttcaaggccatttttcctgacaaaagaagaagtcaccaactcaatcagttttcaggccttgaaccatgaagataggcacttgctatttctttacacaaggtcatagttcaatgaaagtcaacttgtttagctcatgtccgatattactatgatgatgagtctttgactcgtatgttatattcgtcctaacatcagtatttataaatctgagtctcttgttgatgaacacaatatctgttcggaaaacaaagtgaagaatgtagttcagcaaacaaagatatcggggttttaagtaggtcccatgttagttctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="94214" stop="92420"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93914" g_stop="93754" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="161" r_length="161" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93753" i_stop="93678" i_length="76">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93677" g_stop="93591" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="248" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93590" i_stop="92986" i_length="605">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.696" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92985" g_stop="92720" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="514" r_length="266" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E246053" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246053" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93914" e_stop="93754"/>
          <exon e_start="93677" e_stop="93591"/>
          <exon e_start="92985" e_stop="92720"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCATCTTCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCACTCTATGAAAACCCCAGGGTATTATTCAACTTTTCAATTTTTAAACATTATCTACTTGTAAATCAATTAAGTTGAATCATTGAATTTTGAGCAGGCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAGGTATTCATCACCAATAATTTGTTTTCTACTCCATGGGGAAATACTTAATTTATGAACTAATTTTAGCATCCTTTTATATCTTGTTTGGTTACTAACATATCTGAATTAGTTACCTCTGCCTTGAAAGTGAGTGGGGTAGTAGTAATGGGATTAGTTATCTCGAGATAAAACAATGAAAAATGACAAAAACACCCCTGAGGTCCTTCGAGGAAGGGTATCTTTGTAAACAAATAATTTGTTGGAAATTATGCAAACTTGTTTTCAACCAAATGGCCCCTTCGAGTTAGAGTTAAGAGGCCACAGGTCCATTTTTTCAACTGAGTATCCGTTTCTGTTCTTGGTTTATCCAATGTTGAGCCCACATTTTATATTGACCAAGTCTCATAGGTTGGGTCCTGGGATGTTGGAGGGGTTAAAGGTTGGTAAGTGTATCGCACATTGATTGAGGAATTGGTTCGTTATATGGCGCGGACAACATGAGCTAGTACAAGGTCCACTTTCATAAAATGAATTCCCAAATTCATCTTTTAATCTCTTTTGTGTTTTGTTTGTTTGTGTGCTAATTGAGCACCAACATGTCACTTGTCTGAAATTCTGCTCTTCAGTTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTAC</genome_strand>
        <mrna_strand>CATCATCTTCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCTCTCTATGAAAACCCCAGG............................................................................GCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E316693" ref_strand="+" ref_description="SGN-E316693 [cTOB-5-D4]">
      <seq>taatcctcagctaaatggtttaaattgcagcatctcatacatgatcttaattcctcaacaatttcttcgtccccaaattaaatgaaaaaggaaaattcttcttccgccaacaattgattgtgaaatctcacattatagatagtgctacaacttacacttgcagaattagcactgatattcctctctatgaaaaccccagggctcgctttgatcgatatttggagaataagcctcgagtgttcaaggccatttttactgacaaaagaagaagtcaccaactcaatcagttttcaggcctcgaaccatgaagataggcacttgctatgtctttacacaaggtcatagctcaatgacagtcaacttgtttagctcatgtccgatattactatgatgatgagtctttgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="94232" stop="92566"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93953" g_stop="93754" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="200" r_length="200" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93753" i_stop="93678" i_length="76">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93677" g_stop="93591" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="287" r_length="87" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93590" i_stop="92986" i_length="605">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.696" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92985" g_stop="92866" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="407" r_length="120" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E316693" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>407</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316693" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93953" e_stop="93754"/>
          <exon e_start="93677" e_stop="93591"/>
          <exon e_start="92985" e_stop="92866"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCCTCAGCTAAATGGCAAAAATTGCAGTATCTCATACATCATCTTCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCACTCTATGAAAACCCCAGGGTATTATTCAACTTTTCAATTTTTAAACATTATCTACTTGTAAATCAATTAAGTTGAATCATTGAATTTTGAGCAGGCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAGGTATTCATCACCAATAATTTGTTTTCTACTCCATGGGGAAATACTTAATTTATGAACTAATTTTAGCATCCTTTTATATCTTGTTTGGTTACTAACATATCTGAATTAGTTACCTCTGCCTTGAAAGTGAGTGGGGTAGTAGTAATGGGATTAGTTATCTCGAGATAAAACAATGAAAAATGACAAAAACACCCCTGAGGTCCTTCGAGGAAGGGTATCTTTGTAAACAAATAATTTGTTGGAAATTATGCAAACTTGTTTTCAACCAAATGGCCCCTTCGAGTTAGAGTTAAGAGGCCACAGGTCCATTTTTTCAACTGAGTATCCGTTTCTGTTCTTGGTTTATCCAATGTTGAGCCCACATTTTATATTGACCAAGTCTCATAGGTTGGGTCCTGGGATGTTGGAGGGGTTAAAGGTTGGTAAGTGTATCGCACATTGATTGAGGAATTGGTTCGTTATATGGCGCGGACAACATGAGCTAGTACAAGGTCCACTTTCATAAAATGAATTCCCAAATTCATCTTTTAATCTCTTTTGTGTTTTGTTTGTTTGTGTGCTAATTGAGCACCAACATGTCACTTGTCTGAAATTCTGCTCTTCAGTTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACT</genome_strand>
        <mrna_strand>TAATCCTCAGCTAAATGGTTTAAATTGCAGCATCTCATACATGATCTTAATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCACATTATAGATAGTGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCTCTCTATGAAAACCCCAGG............................................................................GCTCGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTACTGACAAAAGAAGAAGTCACCAACTCAATCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAGGCCTCGAACCATGAAGATAGGCACTTGCTATGTCTTTACACAAGGTCATAGCTCAATGACAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E348266" ref_strand="+" ref_description="SGN-E348266 [cTOF-27-M4]">
      <seq>attaatggagtccttgtcaaaatcattagaccattcaattaagtaatcctcagctaaatggcaaaaattgcagcatctcatacatcatcttcattcctcaacaatttcttcgtccccaaattaaatgaaaaaggaaaattcttcttccgccaacaattgattgtgaaatctcagattatagataatgctacaacttacacttgcagaattagcactgatattcctctctatgaaaaccccagggcttgctttgatcgatatttggagaataagcctcgagtgttcaaggccatttttcctgacaaaagaagaagtcaccaactcaatcaggtattcatcaccaataatttgttttctactccatggggaaatacttaatttatgaactaattttagcatccttttatatcttgtttggttactaacatatctgaattagttacctctgccttgaaagtgagtggggtagtagtaatgggattagttatctcgagataaaacaatgaaaaatgacaaaaacacccctgaggtccttcgaggaagggtatctttgtaaacaaataatttgttggaaattatgcaaacttgttttcaaccaaatggccccttcgagttagagttaagaggccacaggtccattttttcaactgagtatccgtttctgtncttggtttatccaatgttgagcccacattttatattgaccaagtctcataggttgggtcctggggatgttggagggttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="94296" stop="92875"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93996" g_stop="93754" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="243" r_length="243" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93753" i_stop="93678" i_length="76">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93677" g_stop="93175" g_length="503"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="746" r_length="503" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E348266" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>746</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E348266" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93996" e_stop="93754"/>
          <exon e_start="93677" e_stop="93175"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAATGGAGTCCTTGTCAAAATCATTAGACCATTCAATTAAGTAATCCTCAGCTAAATGGCAAAAATTGCAGTATCTCATACATCATCTTCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCACTCTATGAAAACCCCAGGGTATTATTCAACTTTTCAATTTTTAAACATTATCTACTTGTAAATCAATTAAGTTGAATCATTGAATTTTGAGCAGGCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAGGTATTCATCACCAATAATTTGTTTTCTACTCCATGGGGAAATACTTAATTTATGAACTAATTTTAGCATCCTTTTATATCTTGTTTGGTTACTAACATATCTGAATTAGTTACCTCTGCCTTGAAAGTGAGTGGGGTAGTAGTAATGGGATTAGTTATCTCGAGATAAAACAATGAAAAATGACAAAAACACCCCTGAGGTCCTTCGAGGAAGGGTATCTTTGTAAACAAATAATTTGTTGGAAATTATGCAAACTTGTTTTCAACCAAATGGCCCCTTCGAGTTAGAGTTAAGAGGCCACAGGTCCATTTTTTCAACTGAGTATCCGTTTCTGTTCTTGGTTTATCCAATGTTGAGCCCACATTTTATATTGACCAAGTCTCATAGGTTGGGTCCT-GGGATGTTGGAGGGGTTAA</genome_strand>
        <mrna_strand>ATTAATGGAGTCCTTGTCAAAATCATTAGACCATTCAATTAAGTAATCCTCAGCTAAATGGCAAAAATTGCAGCATCTCATACATCATCTTCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCTCTCTATGAAAACCCCAGG............................................................................GCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAGGTATTCATCACCAATAATTTGTTTTCTACTCCATGGGGAAATACTTAATTTATGAACTAATTTTAGCATCCTTTTATATCTTGTTTGGTTACTAACATATCTGAATTAGTTACCTCTGCCTTGAAAGTGAGTGGGGTAGTAGTAATGGGATTAGTTATCTCGAGATAAAACAATGAAAAATGACAAAAACACCCCTGAGGTCCTTCGAGGAAGGGTATCTTTGTAAACAAATAATTTGTTGGAAATTATGCAAACTTGTTTTCAACCAAATGGCCCCTTCGAGTTAGAGTTAAGAGGCCACAGGTCCATTTTTTCAACTGAGTATCCGTTTCTGTNCTTGGTTTATCCAATGTTGAGCCCACATTTTATATTGACCAAGTCTCATAGGTTGGGTCCTGGGGATGTTGGA-GGGTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E314199" ref_strand="+" ref_description="SGN-E314199 [cTOA-21-P16]">
      <seq>ggagtccttgtcaaaatcattagaccattcaattaagtaatcctcagctaaatggcaaaaattgcagcatctcatacatcatcttcattcctcaacaatttcttcgtccccaaattaaatgaaaaaggaaaattcttcttccgccaacaattgattgtgaaatctcagattatagataatgctacaacttacacttgcagaattagcactgatattcctctctatgaaaaccccagggcttgctttgatcgatatttggagaataagcctcgagtgttcaaggccatttttcctgacaaaagaagaagtcaccaactcaatcaggtattcatcaccaataatttgttttctactccatggggaaatacttaatttatgaactaattttagcatccttttatatcttgtttggttactaacatatctgaattagttacctctgccttgaaagtgagtggggtagtagtaatgggattagttatctcgagataaacaatgaaaaatgacaaaaacacccctgaggtccttcgaggaagggtatctttgtaaacaaataatttgttggaaattatgcaaacttgttttcaaccaaatggccccttcgagttagagttaagaggccacaggtccattttttcaactgagtatccgtttctgttcttggtttatccaatgttgagcccacattttatattgaccaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="94290" stop="92911"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93990" g_stop="93754" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93753" i_stop="93678" i_length="76">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93677" g_stop="93211" g_length="467"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="703" r_length="466" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E314199" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>704</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314199" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93990" e_stop="93754"/>
          <exon e_start="93677" e_stop="93211"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGTCCTTGTCAAAATCATTAGACCATTCAATTAAGTAATCCTCAGCTAAATGGCAAAAATTGCAGTATCTCATACATCATCTTCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCACTCTATGAAAACCCCAGGGTATTATTCAACTTTTCAATTTTTAAACATTATCTACTTGTAAATCAATTAAGTTGAATCATTGAATTTTGAGCAGGCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAGGTATTCATCACCAATAATTTGTTTTCTACTCCATGGGGAAATACTTAATTTATGAACTAATTTTAGCATCCTTTTATATCTTGTTTGGTTACTAACATATCTGAATTAGTTACCTCTGCCTTGAAAGTGAGTGGGGTAGTAGTAATGGGATTAGTTATCTCGAGATAAAACAATGAAAAATGACAAAAACACCCCTGAGGTCCTTCGAGGAAGGGTATCTTTGTAAACAAATAATTTGTTGGAAATTATGCAAACTTGTTTTCAACCAAATGGCCCCTTCGAGTTAGAGTTAAGAGGCCACAGGTCCATTTTTTCAACTGAGTATCCGTTTCTGTTCTTGGTTTATCCAATGTTGAGCCCACATTTTATATTGACCAAGT</genome_strand>
        <mrna_strand>GGAGTCCTTGTCAAAATCATTAGACCATTCAATTAAGTAATCCTCAGCTAAATGGCAAAAATTGCAGCATCTCATACATCATCTTCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCTCTCTATGAAAACCCCAGG............................................................................GCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAGGTATTCATCACCAATAATTTGTTTTCTACTCCATGGGGAAATACTTAATTTATGAACTAATTTTAGCATCCTTTTATATCTTGTTTGGTTACTAACATATCTGAATTAGTTACCTCTGCCTTGAAAGTGAGTGGGGTAGTAGTAATGGGATTAGTTATCTCGAGAT-AAACAATGAAAAATGACAAAAACACCCCTGAGGTCCTTCGAGGAAGGGTATCTTTGTAAACAAATAATTTGTTGGAAATTATGCAAACTTGTTTTCAACCAAATGGCCCCTTCGAGTTAGAGTTAAGAGGCCACAGGTCCATTTTTTCAACTGAGTATCCGTTTCTGTTCTTGGTTTATCCAATGTTGAGCCCACATTTTATATTGACCAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E313238" ref_strand="+" ref_description="SGN-E313238 [cTOA-18-O5]">
      <seq>attaatggagtccttgtcaaaatcattagaccattcaattaagtaatcctcagctaaatggcaaaaattgcagcatctcatacatcatcttcattcctcaacaatttcttcgtccccaaattaaatgaaaaaggaaaattcttcttccgccaacaattgattgtgaaatctcagattatagataatgctacaacttacacttgcagaattagcactgatattcctctctatgaaaaccccacggcttgctttgatcgatatttggagaataagcctcgagtgttcaaggccatttttcctgacaaaagaagaagtcaccaactcaatcaggtattcatcaccaataatttgttttctactccatggggaaatacttaatttatgaactaattttagcatccttttatatcttgtttggttactaacatatctgaattagttacctctgccttgaaagtgagtggggtagtagtaatgggattagttatctcgagataaaacaatgaaaaatgacaaaaacacccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="94296" stop="93096"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93996" g_stop="93754" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="243" r_length="243" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93753" i_stop="93678" i_length="76">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93677" g_stop="93396" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="525" r_length="282" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E313238" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E313238" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93996" e_stop="93754"/>
          <exon e_start="93677" e_stop="93396"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAATGGAGTCCTTGTCAAAATCATTAGACCATTCAATTAAGTAATCCTCAGCTAAATGGCAAAAATTGCAGTATCTCATACATCATCTTCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCACTCTATGAAAACCCCAGGGTATTATTCAACTTTTCAATTTTTAAACATTATCTACTTGTAAATCAATTAAGTTGAATCATTGAATTTTGAGCAGGCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAGGTATTCATCACCAATAATTTGTTTTCTACTCCATGGGGAAATACTTAATTTATGAACTAATTTTAGCATCCTTTTATATCTTGTTTGGTTACTAACATATCTGAATTAGTTACCTCTGCCTTGAAAGTGAGTGGGGTAGTAGTAATGGGATTAGTTATCTCGAGATAAAACAATGAAAAATGACAAAAACACCCC</genome_strand>
        <mrna_strand>ATTAATGGAGTCCTTGTCAAAATCATTAGACCATTCAATTAAGTAATCCTCAGCTAAATGGCAAAAATTGCAGCATCTCATACATCATCTTCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCTCTCTATGAAAACCCCACG............................................................................GCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAGGTATTCATCACCAATAATTTGTTTTCTACTCCATGGGGAAATACTTAATTTATGAACTAATTTTAGCATCCTTTTATATCTTGTTTGGTTACTAACATATCTGAATTAGTTACCTCTGCCTTGAAAGTGAGTGGGGTAGTAGTAATGGGATTAGTTATCTCGAGATAAAACAATGAAAAATGACAAAAACACCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E273357" ref_strand="+" ref_description="SGN-E273357 [cLEN-3-L15]">
      <seq>aatttttgttattcttcaaattttctaaagtttttaaaagcattttctttataagatatggatccatcaaatttatacgtacatcctggtccagtagagcatgatgtattaaaaattcaagttcatcatcgttccgaaggaatttggaatggtagcataaaagaagagaaatgttgcttatatacgcgtcgtggtgatattgaattttggcaacatttaaaatatcatccattacattctcgcatccttcaatattttgaaaattgtagatttaaaggaattcttgatgttggatgtgtgccgtatgactccggattaatttctgctttaattgaaaggtggcgtccggaaactcatacttttcacatgcgaactgacgaggctaccataactttacaagatattgaaattttattcggaatggtagtagatggtagtcctataattttaaatggagctgattctttaaggattataggtagacaagaaatgatttttcaattaacaggatggttacccgatactagttgtttttctggtgttagtagattgtcaacatataaattgattgagtatatcgaaggtttggaagttattaacgataactcaactgagcatgaagttcaacaaagatttagattatatttattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="94571" stop="95950"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94871" g_stop="94925" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94926" i_stop="95054" i_length="129">
            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95055" g_stop="95650" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="652" r_length="597" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E273357" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>651</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273357" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94871" e_stop="94925"/>
          <exon e_start="95055" e_stop="95650"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTCTTGTTATTCTTCAAATTTTCTAAAGTTTTTAAAAGCATTTTCTTTATAAGGTGAGTTTAAATTTATTTTATTTTTAATTTATTTTAATTAATTTTATACTTTTATATGATATTGTTGATATATTCAATCGTTTGATACTTATATTAATGTTAATTTTTCGTTTTATTTTTTGTGTATAGATATGCATCTGTCAAATTTATACGTACATCCTGGTCCAGTAGAGCATGATGTATTAAAAATTCAAGTTCATCATCGTTCCGAAGGAATTTGGAACGGTAGCATAAAAGAAGAGAGATGTTGCTTATATACGCGTCGTGGTGATATTGAATTTTGGCAACATTTAAAATATCATCCATTACATTCTCGCATCCTTCAATATTTTGAAAATTATAGATTTAAAGGAATTCTTGATGTTGGATGTGTGTCGTATGACTCCGGATTAATTTCTGCTTTAATTGGAAAGTGGCGT-CGAAAACTCATACTTTTCACATGCGAACTGGCGAGGCTACCATAACTTTACAAGATATTGAAATTTTATTCGGAATGGTAGTAGATGGTAGACCTATAATTTTAAATGGAGCTGATTCTCTAGGGATTATAGGTAGATAAGAAATGATTTTTCAATTAACAGGATGGTTACCCGATACTAGTTGTTTTTCTGGTGTTAGTAGATTGTTAACATATAAATTGATTGAGTATATAGAATGTTTGGAAGTTATTAATGATAACTCAACTGAGCATGAAGTTCAACAAAAATTTAGATTATATTTATTAT</genome_strand>
        <mrna_strand>AATTTTTGTTATTCTTCAAATTTTCTAAAGTTTTTAAAAGCATTTTCTTTATAAG.................................................................................................................................ATATGGATCCATCAAATTTATACGTACATCCTGGTCCAGTAGAGCATGATGTATTAAAAATTCAAGTTCATCATCGTTCCGAAGGAATTTGGAATGGTAGCATAAAAGAAGAGAAATGTTGCTTATATACGCGTCGTGGTGATATTGAATTTTGGCAACATTTAAAATATCATCCATTACATTCTCGCATCCTTCAATATTTTGAAAATTGTAGATTTAAAGGAATTCTTGATGTTGGATGTGTGCCGTATGACTCCGGATTAATTTCTGCTTTAATTGAAAGGTGGCGTCCGGAAACTCATACTTTTCACATGCGAACTGACGAGGCTACCATAACTTTACAAGATATTGAAATTTTATTCGGAATGGTAGTAGATGGTAGTCCTATAATTTTAAATGGAGCTGATTCTTTAAGGATTATAGGTAGACAAGAAATGATTTTTCAATTAACAGGATGGTTACCCGATACTAGTTGTTTTTCTGGTGTTAGTAGATTGTCAACATATAAATTGATTGAGTATATCGAAGGTTTGGAAGTTATTAACGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E276288" ref_strand="+" ref_description="SGN-E276288 [cLEN-21-K4]">
      <seq>ttggaagttattaacgataactcaactgagcatgaagttcaacaaagatttagattatatttattatggttatgtggtggatcaatatttccggataaatctaataataagattaatttggacattttgattgacatgagaaatttagatttaatgtcaactcaagcatggggatcggccgcattatcatatttgtataattgtttatgtcgtgcgtcaatgaaaaaatcaaatgaagtttgtggatttctctctttagtgtaggtatacatattttttgattaaatattttttatatactagtaatatgcacttttaaatttaagtgcattataagtaatggtgaatttatttattgtagatttgggcatgggaaagaattattcccctgcaaccattgccaaagcctctaagaaccaatcaatttgaggctttaactgcacttgcacgtaaatggacgcgacgtagaaatcatcaaaatgaggcacgaactgtaatcggtgtgattagggatgtacttgataatctaactgatgaacaagtatttgatattattagtatcttatacttttcatattttattttattttaaataagaatatatttgtttctgccaatgttgtttttataattatcttacttaattattttttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="95284" stop="96610"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95584" g_stop="96189" g_length="606"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="607" r_length="607" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96190" i_stop="96262" i_length="73">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96263" g_stop="96310" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="608" r_stop="655" r_length="48" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E276288" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E276288" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95584" e_stop="96189"/>
          <exon e_start="96263" e_stop="96310"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGAAGTTATTAATGATAACTCAACTGAGCATGAAGTTCAACAAAAATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGGATCGGCCGCATTATCATATTTGTATAATTGTTTATGCCATGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGCAGATATACATA-TTTTTAATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCAAAAGCCTCTAAGAACCAATCAATTTGAGGCTTCAACTGTGCTTGCACGTAAATGGACGTGACGTAGACTTTATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTCACTGATGAACAGGTATTTAATATTATTAGTATCTTAAACTTTTCATATTTTATTTTATTTTAAATAAGAATATATTTGGTAGATCTTTAAATGACACAATGGTACAAAAAAATTATTTTGTAAAATTGTTCATTTTCACGTAAATATTTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTTA</genome_strand>
        <mrna_strand>TTGGAAGTTATTAACGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGGATCGGCCGCATTATCATATTTGTATAATTGTTTATGTCGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGTAGGTATACATATTTTTTGATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAATTTGAGGCTTTAACTGCACTTGCACGTAAATGGACGCGACGTAGAAATCATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTAACTGATGAACAAGTATTTGATATTATTAGTATCTTATACTTTTCATATTTTATTTTATTTTAAATAAGAATATATTTG.........................................................................TTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E276340" ref_strand="+" ref_description="SGN-E276340 [cLEN-21-J12]">
      <seq>agttattaactataactcaactgagtttgaagttcaacaaagatttagattatatggattatggttatgcggtggatcaatatttccggataaatctaataataagattaatttggacattttgattgacatgagaaatttagatttaatgtcaactcaagcatggggatcggccgcattatcatatttgtataattgtttatgtcgtgcgtcaatgaaaaaatcaaatgaagtttgtggatttctctctttagtgtaggtatacatattttttgattaaatattttttatatactagtaatatgcacttttaaatttaagtgcattataagtaatggtgaatttatttattgtagatttgggcatgggaaagaattattcccctgcaaccattgccaaagcctctaagaaccaatcaatttgaggctttaactgcacttgcacgtaaatggacgcgacgtagaaatcatcaaaatgaggcacgaactgtaatcggtgtgattagggatgtacttgataatctaactgatgaacaagtatttgatattattagtatcttatacttttcatattttattttattttaaataagaatatatttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="95289" stop="96488"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95589" g_stop="96191" g_length="603"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="604" r_length="604" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E276340" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E276340" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95589" e_stop="96191"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTATTAATGATAACTCAACTGAGCATGAAGTTCAACAAAAATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGGATCGGCCGCATTATCATATTTGTATAATTGTTTATGCCATGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGCAGATATACATA-TTTTTAATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCAAAAGCCTCTAAGAACCAATCAATTTGAGGCTTCAACTGTGCTTGCACGTAAATGGACGTGACGTAGACTTTATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTCACTGATGAACAGGTATTTAATATTATTAGTATCTTAAACTTTTCATATTTTATTTTATTTTAAATAAGAATATATTTGGT</genome_strand>
        <mrna_strand>AGTTATTAACTATAACTCAACTGAGTTTGAAGTTCAACAAAGATTTAGATTATATGGATTATGGTTATGCGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGGATCGGCCGCATTATCATATTTGTATAATTGTTTATGTCGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGTAGGTATACATATTTTTTGATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAATTTGAGGCTTTAACTGCACTTGCACGTAAATGGACGCGACGTAGAAATCATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTAACTGATGAACAAGTATTTGATATTATTAGTATCTTATACTTTTCATATTTTATTTTATTTTAAATAAGAATATATTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E276550" ref_strand="+" ref_description="SGN-E276550 [cLEN-17-K14]">
      <seq>ttaacgataactcaactgagcatgaagttcaacaaagatttagattatatttattatggttatgtggtggatcaatatttccggataaatctaataataagattaatttggacattttgattgacatgagaaatttagatttaatgtcaactcaagcatggggatcggccgcattatcatatttgtataattgtttatgtcgtgcgtcaatgaaaaaatcaaatgaagtttgtggatttctctctttagtgtagatttgggcatgggaaagaattattcccctgcaacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="95294" stop="96279"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95594" g_stop="95847" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="254" r_length="254" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95848" i_stop="95943" i_length="96">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95944" g_stop="95979" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="290" r_length="36" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E276550" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>290</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E276550" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95594" e_stop="95847"/>
          <exon e_start="95944" e_stop="95979"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATGATAACTCAACTGAGCATGAAGTTCAACAAAAATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGGATCGGCCGCATTATCATATTTGTATAATTGTTTATGCCATGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGCAGATATACATATTTTTAATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCA</genome_strand>
        <mrna_strand>TTAACGATAACTCAACTGAGCATGAAGTTCAACAAAGATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGGATCGGCCGCATTATCATATTTGTATAATTGTTTATGTCGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGTAG................................................................................................ATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E276969" ref_strand="+" ref_description="SGN-E276969 [cLEN-22-H23]">
      <seq>cgtgcgtcaatgaaaaaatcaaatgaagtttgtggatttctctctttagtgtagatttgggcatgggaaagaattattcccctgcaaccattgccaaagcctctaagaaccaatcaatttgaggctttaactgcacttgcacgtaaatggacgcgacgtagaaatcatcaaaatgaggcacgaactgtaatcggtgtgattagggatgtacttgataatctaactgatgaacaagtatttgatattattagtatcttatacttttcatattttattttattttaaataagaatatatttttttctgccaatgttgtttttataattatcttacttaattatttttttatagtttattcggcagccttattcggaagatgttattaatggattgcctgagtggtgtcggtcaggacaacgtgtctggatggcacaggtgccactgatttatggaatttatcgtgagtggcacatggttgatcgtgttgtgagacagttcgattatttacaacatattcctggaccgtgtacccaattttccgaatatcattttaagcgtaataaacgatcaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="95494" stop="96836"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95794" g_stop="95847" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95848" i_stop="95943" i_length="96">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95944" g_stop="96185" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="296" r_length="242" r_score="0.950"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96186" i_stop="96258" i_length="73">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96259" g_stop="96536" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="574" r_length="278" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E276969" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E276969" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95794" e_stop="95847"/>
          <exon e_start="95944" e_stop="96185"/>
          <exon e_start="96259" e_stop="96536"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGCAGATATACATATTTTTAATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCAAAAGCCTCTAAGAACCAATCAATTTGAGGCTTCAACTGTGCTTGCACGTAAATGGACGTGACGTAGACTTTATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTCACTGATGAACAGGTATTTAATATTATTAGTATCTTAAACTTTTCATATTTTATTTTATTTTAAATAAGAATATATTTGGTAGATCTTTAAATGACACAATGGTACAAAAAAATTATTTTGTAAAATTGTTCATTTTCACGTAAATATTTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTTATAGTTTATTTGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGGATGGCACAGGTGCCACTGATTTATGGAATTTATCGTGAGTGGCACATGGTTGATCGTGTTGTGAGACAGTTCGATTATTTACAACATATTCCTGGACCGTGTACCCAATTTTCCGAATATCATTTTAAGCGTGATAAACGATCTATAA</genome_strand>
        <mrna_strand>CGTGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGTAG................................................................................................ATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCCAAAGCCTCTAAGAACCAATCAATTTGAGGCTTTAACTGCACTTGCACGTAAATGGACGCGACGTAGAAATCATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTAACTGATGAACAAGTATTTGATATTATTAGTATCTTATACTTTTCATATTTTATTTTATTTTAAATAAGAATATA.........................................................................TTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTTATAGTTTATTCGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGGATGGCACAGGTGCCACTGATTTATGGAATTTATCGTGAGTGGCACATGGTTGATCGTGTTGTGAGACAGTTCGATTATTTACAACATATTCCTGGACCGTGTACCCAATTTTCCGAATATCATTTTAAGCGTAATAAACGATCAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E393845" ref_strand="-" ref_description="SGN-E393845 [TUS-41-D13]">
      <seq>caatccattaataacatcttcaaaaaaaagctgccgaataaactataaaaaaataattaagtaagataattataaaaacaacattggcagaaaaaaatatattcttatttaaaataaaataaaatatgaaaagtataagatactaataatatcaaatacttgttcatcagttagattatcaagtacatccctaatcacaccgattacagttcgtgcctcattttgatgatttctacgtcgcgtccatttacgtgcaagtgcagttaaagcctcaaattgattggttcttagaggctttggcaatggttgcaggggaataatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="96655" stop="95661"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96355" g_stop="96259" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96258" i_stop="96186" i_length="73">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96185" g_stop="95961" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="322" r_length="225" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E393845" ref_strand="-">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>322</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393845" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="96355" e_stop="96259"/>
          <exon e_start="96185" e_stop="95961"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATCCATTAATAACATCTTCCGAATAAGGCTGCCAAATAAACTATAAAAAAATAATTAAGTAAGATAATTATAAAAACAACATTGGCAGAAAAAAAATATTTACGTGAAAATGAACAATTTTACAAAATAATTTTTTTGTACCATTGTGTCATTTAAAGATCTACCAAATATATTCTTATTTAAAATAAAATAAAATATGAAAAGTTTAAGATACTAATAATATTAAATACCTGTTCATCAGTGAGATTATCAAGTACATCCCTAATCACACCGATTACAGTTCGTGCCTCATTTTGATAAAGTCTACGTCACGTCCATTTACGTGCAAGCACAGTTGAAGCCTCAAATTGATTGGTTCTTAGAGGCTTTTGCAATGGTTGCAGGGGAATAATT</genome_strand>
        <mrna_strand>CAATCCATTAATAACATCTTCAAAAAAAAGCTGCCGAATAAACTATAAAAAAATAATTAAGTAAGATAATTATAAAAACAACATTGGCAGAAAAAAA.........................................................................TATATTCTTATTTAAAATAAAATAAAATATGAAAAGTATAAGATACTAATAATATCAAATACTTGTTCATCAGTTAGATTATCAAGTACATCCCTAATCACACCGATTACAGTTCGTGCCTCATTTTGATGATTTCTACGTCGCGTCCATTTACGTGCAAGTGCAGTTAAAGCCTCAAATTGATTGGTTCTTAGAGGCTTTGGCAATGGTTGCAGGGGAATAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E276989" ref_strand="-" ref_description="SGN-E276989 [cLEN-22-B14]">
      <seq>tgcgggtatgcctcatgtaccaacggaagtaatctgtttgatcacttacaaatggaggtcgaaatatacgattttgacgttgttcccataaatattgtgtatagttaaatgcatctatatcttcttgttttatttttgatcgtttattacgcttaaaatgatattcggaaaattgggtacacggtccaggaatatgttgtaaataatcgaactgtctcacaacacgatcaaccatgtgccactcacgataaattccataaatcagtggcacctgtgccatccagacacgttgtcctgaccgacaccactcaggcaatccattaataacatcttccgaataaggctgccgaataaactataaaaaaataattaagtaagataattataaaaacaacattggcagaaaaaaatatattcttatttaaaataaaataaaatatgaaaagtataagatactaataatatcaaatacttgttcatcagttagattatcaagtacatccctaatcacaccgattacagttcgtgcctcattttgatgatttctacgtcgcgtccatttacgtgcaagtgcagttaaagcctcaaattgattggttcttagaggctttggcaatggttgcaggggaataat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="96968" stop="95662"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96668" g_stop="96259" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="410" r_length="410" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96258" i_stop="96186" i_length="73">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96185" g_stop="95962" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="634" r_length="224" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E276989" ref_strand="-">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276989" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="96668" e_stop="96259"/>
          <exon e_start="96185" e_stop="95962"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCGGGTATGCCTTATGTACCATCGAAAGTAATCTGTTTGATCACTTACAAATGGAGGTCGAAATATACGATTTTGACGTTGTTCCCATAAATATTGTGTATAGTTAAATGCATCTATATCTTCTTATTTTATTATAGATCGTTTATCACGCTTAAAATGATATTCGGAAAATTGGGTACACGGTCCAGGAATATGTTGTAAATAATCGAACTGTCTCACAACACGATCAACCATGTGCCACTCACGATAAATTCCATAAATCAGTGGCACCTGTGCCATCCAGACACGTTGTCCTGACCGACACCACTCAGGCAATCCATTAATAACATCTTCCGAATAAGGCTGCCAAATAAACTATAAAAAAATAATTAAGTAAGATAATTATAAAAACAACATTGGCAGAAAAAAAATATTTACGTGAAAATGAACAATTTTACAAAATAATTTTTTTGTACCATTGTGTCATTTAAAGATCTACCAAATATATTCTTATTTAAAATAAAATAAAATATGAAAAGTTTAAGATACTAATAATATTAAATACCTGTTCATCAGTGAGATTATCAAGTACATCCCTAATCACACCGATTACAGTTCGTGCCTCATTTTGATAAAGTCTACGTCACGTCCATTTACGTGCAAGCACAGTTGAAGCCTCAAATTGATTGGTTCTTAGAGGCTTTTGCAATGGTTGCAGGGGAATAAT</genome_strand>
        <mrna_strand>TGCGGGTATGCCTCATGTACCAACGGAAGTAATCTGTTTGATCACTTACAAATGGAGGTCGAAATATACGATTTTGACGTTGTTCCCATAAATATTGTGTATAGTTAAATGCATCTATATCTTCTTGTTTTATTTTTGATCGTTTATTACGCTTAAAATGATATTCGGAAAATTGGGTACACGGTCCAGGAATATGTTGTAAATAATCGAACTGTCTCACAACACGATCAACCATGTGCCACTCACGATAAATTCCATAAATCAGTGGCACCTGTGCCATCCAGACACGTTGTCCTGACCGACACCACTCAGGCAATCCATTAATAACATCTTCCGAATAAGGCTGCCGAATAAACTATAAAAAAATAATTAAGTAAGATAATTATAAAAACAACATTGGCAGAAAAAAA.........................................................................TATATTCTTATTTAAAATAAAATAAAATATGAAAAGTATAAGATACTAATAATATCAAATACTTGTTCATCAGTTAGATTATCAAGTACATCCCTAATCACACCGATTACAGTTCGTGCCTCATTTTGATGATTTCTACGTCGCGTCCATTTACGTGCAAGTGCAGTTAAAGCCTCAAATTGATTGGTTCTTAGAGGCTTTGGCAATGGTTGCAGGGGAATAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E275375" ref_strand="-" ref_description="SGN-E275375 [cLEN-10-E10]">
      <seq>acatgttgtggatttccaatgaccatgcgggtatgcctcatgtaccaacggaagtaatctgtttgatcacttacaaatggaggtcgaaatatacgattttgacgttgttcccataaatattgtgtatagttaaatgcatctatatcttcttgttttatttttgatcgtttattacgcttaaaatgatattcggaaaattgggtacacggtccaggaatatgttgtaaataatcgaactgtctcacaacacgatcaaccatgtgccactcacgataaattccataaatcagtggcacctgtgccatccagacacgttgtcctgaccgacaccactcaggcaatccattaataacatcttccgaataaggctgccgaataaactataaaaaaataattaagtaagataattataaaaacaacattggcagaaaaaaatatattcttatttaaaataaaataaaatatgaaaagtataagatactaataatatcaaatacttgttcatcagttagattatcaagtacatccctaatcacaccgattacagttcgtgcctcattttgatgatttctacgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="96993" stop="95744"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96693" g_stop="96259" g_length="435"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="435" r_length="435" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96258" i_stop="96186" i_length="73">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96185" g_stop="96044" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="577" r_length="142" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E275375" ref_strand="-">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E275375" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="96693" e_stop="96259"/>
          <exon e_start="96185" e_stop="96044"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATGTTGTGGATTTCCAATGACCATGCGGGTATGCCTTATGTACCATCGAAAGTAATCTGTTTGATCACTTACAAATGGAGGTCGAAATATACGATTTTGACGTTGTTCCCATAAATATTGTGTATAGTTAAATGCATCTATATCTTCTTATTTTATTATAGATCGTTTATCACGCTTAAAATGATATTCGGAAAATTGGGTACACGGTCCAGGAATATGTTGTAAATAATCGAACTGTCTCACAACACGATCAACCATGTGCCACTCACGATAAATTCCATAAATCAGTGGCACCTGTGCCATCCAGACACGTTGTCCTGACCGACACCACTCAGGCAATCCATTAATAACATCTTCCGAATAAGGCTGCCAAATAAACTATAAAAAAATAATTAAGTAAGATAATTATAAAAACAACATTGGCAGAAAAAAAATATTTACGTGAAAATGAACAATTTTACAAAATAATTTTTTTGTACCATTGTGTCATTTAAAGATCTACCAAATATATTCTTATTTAAAATAAAATAAAATATGAAAAGTTTAAGATACTAATAATATTAAATACCTGTTCATCAGTGAGATTATCAAGTACATCCCTAATCACACCGATTACAGTTCGTGCCTCATTTTGATAAAGTCTACGTC</genome_strand>
        <mrna_strand>ACATGTTGTGGATTTCCAATGACCATGCGGGTATGCCTCATGTACCAACGGAAGTAATCTGTTTGATCACTTACAAATGGAGGTCGAAATATACGATTTTGACGTTGTTCCCATAAATATTGTGTATAGTTAAATGCATCTATATCTTCTTGTTTTATTTTTGATCGTTTATTACGCTTAAAATGATATTCGGAAAATTGGGTACACGGTCCAGGAATATGTTGTAAATAATCGAACTGTCTCACAACACGATCAACCATGTGCCACTCACGATAAATTCCATAAATCAGTGGCACCTGTGCCATCCAGACACGTTGTCCTGACCGACACCACTCAGGCAATCCATTAATAACATCTTCCGAATAAGGCTGCCGAATAAACTATAAAAAAATAATTAAGTAAGATAATTATAAAAACAACATTGGCAGAAAAAAA.........................................................................TATATTCTTATTTAAAATAAAATAAAATATGAAAAGTATAAGATACTAATAATATCAAATACTTGTTCATCAGTTAGATTATCAAGTACATCCCTAATCACACCGATTACAGTTCGTGCCTCATTTTGATGATTTCTACGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E274114" ref_strand="+" ref_description="SGN-E274114 [cLEN-8-I9]">
      <seq>tttgatattattagtatcttatacttttcatattttattttattttaaataagaatatatttttttctgccaatgttgtttttataattatcttacttaattatttttttatagtttattcggcagccttattcggaagatgttattaatggattgcctgagtggtgtcggtcaggacaacgtgtctggatggcacaggtgccactgatttatggaatttatcgtgagtggcacatggttgatcgtgttgtgagacagttcgattatttacaacatattcctggaccgtgtacccaattttccgaatatcattttaagcgtaataaacgatcaaaaataaaacaagaagatatagatgcatttaactatacacaatatttatgggaacaacgtcaaaatcgtatatttcgacctccatttgtaagtgatcaaacagattacttccgttggtacatgaggcatacccgcatggtcattggaaatccacaacatgttgtacaaaaagggtatcaacacatggcaggaagacatgaggcattagctaggggtcatgaaatgcagtatcgtcgagctcggatgattgaaaatgatgaaaatcaatctaatgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="95827" stop="97190"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96127" g_stop="96189" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="63" r_length="63" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96190" i_stop="96262" i_length="73">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96263" g_stop="96739" g_length="477"/>
          <reference_exon_boundary r_type="cDNA" r_start="64" r_stop="540" r_length="477" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96740" i_stop="96820" i_length="81">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96821" g_stop="96890" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="541" r_stop="610" r_length="70" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E274114" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E274114" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96127" e_stop="96189"/>
          <exon e_start="96263" e_stop="96739"/>
          <exon e_start="96821" e_stop="96890"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAATATTATTAGTATCTTAAACTTTTCATATTTTATTTTATTTTAAATAAGAATATATTTGGTAGATCTTTAAATGACACAATGGTACAAAAAAATTATTTTGTAAAATTGTTCATTTTCACGTAAATATTTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTTATAGTTTATTTGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGGATGGCACAGGTGCCACTGATTTATGGAATTTATCGTGAGTGGCACATGGTTGATCGTGTTGTGAGACAGTTCGATTATTTACAACATATTCCTGGACCGTGTACCCAATTTTCCGAATATCATTTTAAGCGTGATAAACGATCTATAATAAAATAAGAAGATATAGATGCATTTAACTATACACAATATTTATGGGAACAACGTCAAAATCGTATATTTCGACCTCCATTTGTAAGTGATCAAACAGATTACTTTCGATGGTACATAAGGCATACCCGCATGGTCATTGGAAATCCACAACATGTTGTACAAAAAGGGTATCAACACATGGCAGGAAGACATGAGGCATTAGTATGTATATTACATAAATTTTAAATTATTATGTCAATCTTTAATAAATTTTTTTTATTAATATTTGTTTATTCTTTATAGGCTAGGGGTCATGAAATGCAGTATCGTCGAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAA</genome_strand>
        <mrna_strand>TTTGATATTATTAGTATCTTATACTTTTCATATTTTATTTTATTTTAAATAAGAATATATTTT.........................................................................TTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTTATAGTTTATTCGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGGATGGCACAGGTGCCACTGATTTATGGAATTTATCGTGAGTGGCACATGGTTGATCGTGTTGTGAGACAGTTCGATTATTTACAACATATTCCTGGACCGTGTACCCAATTTTCCGAATATCATTTTAAGCGTAATAAACGATCAAAAATAAAACAAGAAGATATAGATGCATTTAACTATACACAATATTTATGGGAACAACGTCAAAATCGTATATTTCGACCTCCATTTGTAAGTGATCAAACAGATTACTTCCGTTGGTACATGAGGCATACCCGCATGGTCATTGGAAATCCACAACATGTTGTACAAAAAGGGTATCAACACATGGCAGGAAGACATGAGGCATTA.................................................................................GCTAGGGGTCATGAAATGCAGTATCGTCGAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E273853" ref_strand="+" ref_description="SGN-E273853 [cLEN-7-O9]">
      <seq>ttgatcgtgttgtgagacagttcgattatttacaacggagtcctggaccgtgtacccaattttccgaatatcattttaagcgtaataaacgatcaaaaataaaacaagaggatatagatgcatttaactgtgcacaagatttatgggaacaacgtcaaaatcgtatatttcgacctccatttgtaagtgatcaaacagattacttccgttggtacatgaggcatacccgcatggtcattggaaatccacaacatgttgtacaaaaagggtatcaacacatggcaggaagacatgaggcattagctaggggtcatgaaatgcagtatcgtggagctcggatgattgaaaatgatgaaaatcaatctgatggaatgagacaatatgcagcggaagtcgctcgtatttcaatggagggaatgaaggcaggctcttaaggaacgcgattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="96138" stop="97248"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96438" g_stop="96739" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96740" i_stop="96820" i_length="81">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96821" g_stop="96964" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="446" r_length="144" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E273853" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>446</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273853" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96438" e_stop="96739"/>
          <exon e_start="96821" e_stop="96964"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATCGTGTTGTGAGACAGTTCGATTATTTACAACATATTCCTGGACCGTGTACCCAATTTTCCGAATATCATTTTAAGCGTGATAAACGATCTATAATAAAATAAGAAGATATAGATGCATTTAACTATACACAATATTTATGGGAACAACGTCAAAATCGTATATTTCGACCTCCATTTGTAAGTGATCAAACAGATTACTTTCGATGGTACATAAGGCATACCCGCATGGTCATTGGAAATCCACAACATGTTGTACAAAAAGGGTATCAACACATGGCAGGAAGACATGAGGCATTAGTATGTATATTACATAAATTTTAAATTATTATGTCAATCTTTAATAAATTTTTTTTATTAATATTTGTTTATTCTTTATAGGCTAGGGGTCATGAAATGCAGTATCGTCGAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGCGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCGGCCTTTCAGGAAACGCGATTG</genome_strand>
        <mrna_strand>TTGATCGTGTTGTGAGACAGTTCGATTATTTACAACGGAGTCCTGGACCGTGTACCCAATTTTCCGAATATCATTTTAAGCGTAATAAACGATCAAAAATAAAACAAGAGGATATAGATGCATTTAACTGTGCACAAGATTTATGGGAACAACGTCAAAATCGTATATTTCGACCTCCATTTGTAAGTGATCAAACAGATTACTTCCGTTGGTACATGAGGCATACCCGCATGGTCATTGGAAATCCACAACATGTTGTACAAAAAGGGTATCAACACATGGCAGGAAGACATGAGGCATTA.................................................................................GCTAGGGGTCATGAAATGCAGTATCGTGGAGCTCGGATGATTGAAAATGATGAAAATCAATCTGATGGAATGAGACAATATGCAGCGGAAGTCGCTCGTATTTCAATGGAGGGAATGAAGGCAGGCTCTTAAGGAACGCGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E538686" ref_strand="+" ref_description="SGN-E538686 [TUS-58-A22]">
      <seq>cagtatcgtcgagctcggatgattgaaaatgatgaaaatcaatctaatgaaatgagacaatatgcagcggaagtcgctcgtatttcaatggagtcaatgaatgcagcctttcaaggaacgcgattgagctttgatcatgattacaatcctcccactcaatacgatgaaccaccaccagtacaagtatctcgccgatcacgacaaacaacaccgagagagggtgctcgtcgaggtagaaggaccactagtgaaacagctgatttttctgcagggccctctaacactaatgtggcgactcccgagccttattatcccacatttgatttttctgtagggccctctaacactaatccaaatttttctagtcagcaaacagttggttttgtaactccgcaggttccaatatctgggtttgcacaatttagtggttctcaatatggttttcaacatggtatgcgtgaatttccgatacataattctccatttggtggaagattgaatttttcgaatgtaactgcgtttgatgattcaagatttaatgttggggcttcacaaaatttagttcttaatagacaaaatccacctcggagaacatctaggctacacaaatcaactagatgtggaacaggcagtcactatcaaaatgaggaagattttgaaaatgaagatgaaaatgaagatgagaatgaagatgtaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="96539" stop="97936"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96839" g_stop="97348" g_length="510"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="510" r_length="510" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97349" i_stop="97448" i_length="100">
            <donor d_prob="0.982" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97449" g_stop="97636" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="511" r_stop="698" r_length="188" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E538686" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E538686" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96839" e_stop="97348"/>
          <exon e_start="97449" e_stop="97636"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTATCGTCGAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGCGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCGGCCTTTCAGGAAACGCGATTGAGCTTTGATCCTGATTACAATCCTCCCACTCAATACGATGAACCACCACCAGTACAAGTATCTCGCCGATCACGACAAACAACACCGAGAGAGGGTGCTTGTCGAGGTAGAAGGACCACTGGTGAAACAACTGATTTTTCTGCAAGGCCCTCTAACACTAATGTGGCGACTCCAGAGCCTTATTATCCCACATTTGATTTTTCTGCAGGGCCCTCTAACACTAATCCGAATTTTTCTAGTCAGCAAACAGTTGGTTTTGTAACTCCGCAGGTTCCAATATCTGGGTTTGCACAATTTAGTGGTTCTCAATATGGTTTTCAACATGGTATGCGTGAATTTTCGATACATAATTCTCCATTTGGTGGAAGATGGAATTTTTCGAATGTAAGTATAATTATTTTTATACAATTTTTTTAACTTTTTATAATTTTTTTTATTTTTATTGCATGTTTATTTGATAATATTATGTTATATTGTATTATAGGTAATTGCGTTTGATGATTCAAGATTGAATGCTGGGGCTTCACAAAATTTAGTTCTTAATAGACAAAATCCACCTCGGAGAACATCTAGGCTACACAAATCAACTAGATATGGAACAGGCAGTCACTATCAAAATGAGGAAGATTTTGAAAATGAAGATGAAAATGAAGATTCGGATTCAGAAGAATA</genome_strand>
        <mrna_strand>CAGTATCGTCGAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGCGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCAGCCTTTCAAGGAACGCGATTGAGCTTTGATCATGATTACAATCCTCCCACTCAATACGATGAACCACCACCAGTACAAGTATCTCGCCGATCACGACAAACAACACCGAGAGAGGGTGCTCGTCGAGGTAGAAGGACCACTAGTGAAACAGCTGATTTTTCTGCAGGGCCCTCTAACACTAATGTGGCGACTCCCGAGCCTTATTATCCCACATTTGATTTTTCTGTAGGGCCCTCTAACACTAATCCAAATTTTTCTAGTCAGCAAACAGTTGGTTTTGTAACTCCGCAGGTTCCAATATCTGGGTTTGCACAATTTAGTGGTTCTCAATATGGTTTTCAACATGGTATGCGTGAATTTCCGATACATAATTCTCCATTTGGTGGAAGATTGAATTTTTCGAAT....................................................................................................GTAACTGCGTTTGATGATTCAAGATTTAATGTTGGGGCTTCACAAAATTTAGTTCTTAATAGACAAAATCCACCTCGGAGAACATCTAGGCTACACAAATCAACTAGATGTGGAACAGGCAGTCACTATCAAAATGAGGAAGATTTTGAAAATGAAGATGAAAATGAAGATGAGAATGAAGATGTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E275102" ref_strand="+" ref_description="SGN-E275102 [cLEN-9-E16]">
      <seq>agtatcgtcgagctcggatgattgaaaatgatgaaaatcaatctaatgaaatgagacaatatgcagcggaagtcgctcgtatttcaatggagtcaatgaatgcagcctttcaaggaacgcgattgagctttgatcatgattacaatcctcccactcaatacgatgaaccaccaccagtacaagtatctcgccgatcacgacaaacaacaccgagagagggtgctcgtcgaggtagaaggaccactagtgaaacagctgatttttctgcagggccctctaacactaatgtggcgactcccgagccttattatcccacatttgatttttctgtagggccctctaacactaatccaaatttttctagtcagcaaacagttggttttgtaactccgcaggttccaatatctgggtttgcacaatttagtggttctcaatatggttntcaacatggtatgcgtgaatttccgatacataattctccatttggtggaagattgaatttttcgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="+" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="96540" stop="97648"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96840" g_stop="97348" g_length="509"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="509" r_length="509" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="+" ref_id="SGN-E275102" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E275102" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96840" e_stop="97348"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTATCGTCGAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGCGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCGGCCTTTCAGGAAACGCGATTGAGCTTTGATCCTGATTACAATCCTCCCACTCAATACGATGAACCACCACCAGTACAAGTATCTCGCCGATCACGACAAACAACACCGAGAGAGGGTGCTTGTCGAGGTAGAAGGACCACTGGTGAAACAACTGATTTTTCTGCAAGGCCCTCTAACACTAATGTGGCGACTCCAGAGCCTTATTATCCCACATTTGATTTTTCTGCAGGGCCCTCTAACACTAATCCGAATTTTTCTAGTCAGCAAACAGTTGGTTTTGTAACTCCGCAGGTTCCAATATCTGGGTTTGCACAATTTAGTGGTTCTCAATATGGTTTTCAACATGGTATGCGTGAATTTTCGATACATAATTCTCCATTTGGTGGAAGATGGAATTTTTCGAAT</genome_strand>
        <mrna_strand>AGTATCGTCGAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGCGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCAGCCTTTCAAGGAACGCGATTGAGCTTTGATCATGATTACAATCCTCCCACTCAATACGATGAACCACCACCAGTACAAGTATCTCGCCGATCACGACAAACAACACCGAGAGAGGGTGCTCGTCGAGGTAGAAGGACCACTAGTGAAACAGCTGATTTTTCTGCAGGGCCCTCTAACACTAATGTGGCGACTCCCGAGCCTTATTATCCCACATTTGATTTTTCTGTAGGGCCCTCTAACACTAATCCAAATTTTTCTAGTCAGCAAACAGTTGGTTTTGTAACTCCGCAGGTTCCAATATCTGGGTTTGCACAATTTAGTGGTTCTCAATATGGTTNTCAACATGGTATGCGTGAATTTCCGATACATAATTCTCCATTTGGTGGAAGATTGAATTTTTCGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E302503" ref_strand="+" ref_description="SGN-E302503 [cLEX-1-A9](-)">
      <seq>attatagctcattaaattttgcaggacttgttaagatattgaagaagtatgacaaacgaactgggggattgttgcgtcttccttttacacaagtcgcacttcatcagccgatctttactacggaacctctgacgagattagtccatgagtgtgaggctaatcttgaggtcctatttcctttggaagcagaagttgttgaatcagctgtccctgcagatgaacagattggagcaactacttcttatgcttccaatgttctccctgatacaacatttccacagggggaagaaaatggggatatataccgaagcacgctagctgcaataagagccattcagggactaaagaaagcaagctcaacacataacccgctgtcattttcatctaattctgggaaccaagataatgatagcccaggtgctgtaacagcagaagactccgattctgactcattggttgcctctcagaatggtgaagagatgaatcgtgaagtttccagttcaccaaaatagagttgactgatcttgttttgttttgttcattatgtagtgtagtgctaaaactgtgcactttctgtgttgtgtgctataggtctgaataactgcttacccaatcaataatataaagaaattaactttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="106940" stop="103734"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106640" g_stop="106617" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106616" i_stop="104653" i_length="1964">
            <donor d_prob="0.019" d_score="0.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104652" g_stop="104030" g_length="623"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="647" r_length="623" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E302503" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E302503" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106640" e_stop="106617"/>
          <exon e_start="104652" e_stop="104030"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATAGCTCATTAAATTTGGCAGGTATAGAGTTTTTCGGTCAATGTTCACTGGGCACTTCGGAAATGTGTTACCCGTGATAGTTATGTGTTTACAGCATCATAGTGTTCTAAGGATTAGAGGATCTCTTCCCTCTCTCTCCCTACATCCATCACGTGCTATTCCTCCTCAAAGTCTTCCCTCTTTCATACTCTTCTTCTTCCACCTAGTCCGCCCAACACCATCCTTTTCCCAATCTGCACGTGTCTTAGACTCTTACCACTTTCTCCACTGTTATTGGTTCCTTATTCCCTATGTGACTCTTACAAGCAACTCATCAAACTACATAAACTGAGGTAAAGATGCAGCTAGAAGATAGAGAAACAGAATGCTACTCCAAAACAATTTTGACTATTACAAATTTAATCCAAGTATTTGGATGCTGTCTTTCTCTTCACTTAACCCCACATTTTCATGATGTTCCGAAAAGGTCCTAAAATACCCTTATACTATTGAATTTGGTACAAAAAAACCCTTCGTTAATGTTTTGGCTCCAAAATACCCCTGACGTCAACATATTGGCTCTAAACTACCCTTATTTTTAAAGGTCCATTTCAAAAATAAAATTAAGAAATTCATTTATTACATGGCACGTTTCTATTGGCTATTTCCAAAATTAACCTAATTGATTAATCTCAAATCAGAATGCAGATCCACCCAATAACCCATATCCGCCCCGCCTAAAAGCCTCTTTAAATCAACAAATTAGCTTTTTTAAGTTGATTACTTTCTATTGAAAATTTCAAATTATTGGGAAAAAAAGCTTCTCAAGAATTTAAAGATAATCAAAACAACAGGGGTTTTTGAAGCAAGAAAGAGTTCTATGTACTGATGCATCAGATGGGTTATTCATAGTTCACCACTAAAATCAATTTCTCAATTTCACGCTCACTCTTCATGTAACTCCAATCCAAGTTCATGAAGATCACAAGGAGAATGTTCAGAGAACTCAAGAAGCTGACATCATTGATATTTTTTAGTCAATGAAGGAGCTTGAAGTTTAAGAATGGAGATCGAAGATAAAATCGAATGATAGACAGAACATAAGACCTGTTGCAAAGATAAAAATGTATGAACTTTTAGAGAAAAATTTCAGCCAAAGAATAAGACGTCTGATGAAAATTTTACCCATATATTTGACAAAATTTAGACGCTAGATTTGGATTTGAAAAGTTACCCTTTTTGACCCAAAATCTTATTGTTGCATTTCAAGAAGCAGACTTGATTGTTAAAACTCAGGTACAGAGAAAAGCCAAGATTGAAGAGAAGATTTTTAGAACCACTAGGAAAAATGAAGAAGATGAAGATAGGGAACCTCATTTAGACGGAGGCGGATATAGGTTATGGGTAGATCCGGATAATGATTTGAGATTAATTAAATAGGTTAATTTAAATAATAGCCAATAGGAATGCGGCACACAATAAATGAATTTATTAATTTTATTTTTGAAGTGGACCGTTAAAAATAAGGGTAATTTAGAGTCAATACTTTGACGTCAGGGGCATTTGGAGCCAAAAGGTTAACGAAGGGTATTTTTGTACCAAATTCGATAGTTTAAGGGTATTTTAGGTCATTTTCCGCATGCGGTTTAATGTTTAACACATTTCCTCCATCTCTGAGTTTCTGTTTTCCCCAATGTCCTTTTCCATTTTCTGATGATGATTCGTTCTTCCTTAATTCTCTTCCTCTACTTCTAATTCCTTCTACCAGTTCACTTTTTCTTTCTGATTTTATACTTTGAGGGGACAACAGATGATCAGTATTAAAGAGAGGAATATGGGTGACGTAAAATTATGGGAGCTAATAGCTCTACTCGGCAAACACAGACAACTCTCACATAACTAGCCATAGTTTAACACGAAAGTAAGATTTCTTGCTTTGGAGGTATAACTACCTCTGATTTCTGCAAGGTCAAGATATCTTCTCTAACAATTTTTTGTTTCATTAGGACTTGTTAAGATATTGAAGAAGTATGACAAACGAACTGGGGGATTGTTGCGTCTTCCTTTTACACAAGTCGCACTTCATCAGCCGATCTTTACTACGGAACCTCTGACGAGATTAGTCCATGAGTGTGAGGCTAATCTTGAGGTCCTATTTCCTTTGGAAGCAGAAGTTGTTGAATCAGCTGTCCCTGCAGATGAACAGATTGGAGCAACTACTTCTTATGCTTCCAATGTTCTCCCTGATACAACATTTCCACAGGGGGAAGAAAATGGGGATATATACCGAAGCACGCTAGCTGCAATAAGAGCCATTCAGGGACTAAAGAAAGCAAGCTCAACACATAACCCGCTGTCATTTTCATCTAATTCTGGGAACCAAGATAATGATAGCCCAGGTGCTGTAACAGCAGAAGACTCCGATTCTGACTCATTGGTTGCCTCTCAGAATGGTGAAGAGATGAATCGTGAAGTTTCCAGTTCACCAAAATAGAGTTGACTGATCTTGTTTTGTTTTGTTCATTATGTAGTGTAGTGCTAAAACTGTGCACTTTCTGTGTTGTGTGCTATAGGTCTGAATAACTGCTTACCCAATCAATAATATAAAGAAATTAACTTTAAATATTGT</genome_strand>
        <mrna_strand>ATTATAGCTCATTAAATTTTGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGTTAAGATATTGAAGAAGTATGACAAACGAACTGGGGGATTGTTGCGTCTTCCTTTTACACAAGTCGCACTTCATCAGCCGATCTTTACTACGGAACCTCTGACGAGATTAGTCCATGAGTGTGAGGCTAATCTTGAGGTCCTATTTCCTTTGGAAGCAGAAGTTGTTGAATCAGCTGTCCCTGCAGATGAACAGATTGGAGCAACTACTTCTTATGCTTCCAATGTTCTCCCTGATACAACATTTCCACAGGGGGAAGAAAATGGGGATATATACCGAAGCACGCTAGCTGCAATAAGAGCCATTCAGGGACTAAAGAAAGCAAGCTCAACACATAACCCGCTGTCATTTTCATCTAATTCTGGGAACCAAGATAATGATAGCCCAGGTGCTGTAACAGCAGAAGACTCCGATTCTGACTCATTGGTTGCCTCTCAGAATGGTGAAGAGATGAATCGTGAAGTTTCCAGTTCACCAAAATAGAGTTGACTGATCTTGTTTTGTTTTGTTCATTATGTAGTGTAGTGCTAAAACTGTGCACTTTCTGTGTTGTGTGCTATAGGTCTGAATAACTGCTTACCCAATCAATAATATAAAGAAATTAACTTTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E538437" ref_strand="+" ref_description="SGN-E538437 [TUS-57-K7](-)">
      <seq>gaaatgatgaacatccgtaaagactttgtttccatacacggggagatggttcttctgaaaaattatagctcattaaattttgcaggacttgttaagatattgaagaagtatgccaaacgaactgggggattgttgcgtcttccttttacacaagtcgcacttcatcagccgatctttattacggaacctctgacgagattagtccatgagtgtgaggctaatcttgaggtcctatttcctttggaagcagaagttgttgaatcagctgtccctgcagatgaacagattggagcaactacttcttatgcttccaatgttctccctgatacaacatttccccagggggaagaaaatggggatatataccgaagcacgctagctgcaataagagccattcagggactaaagaaagcaagctcaacacataacccgctgtcattttcatctaattctgggaaccaagataatgatagcccaggtgctgtaacagcagaagactccgattttgactcattggttgcctctcagaatggtgaagagatgaatcgtgaagtttccagttcaccaaaatagagttgactgatcttgttttgttttgttcattatgtagggtagtgctaaaactgtgcactttctgtgttgtgtgctataggtctgaataactgcttacccaatcaataatataaagaaattaactttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="107001" stop="103734"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106701" g_stop="106617" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106616" i_stop="104653" i_length="1964">
            <donor d_prob="0.019" d_score="0.94"/>
            <acceptor a_prob="0.952" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104652" g_stop="104037" g_length="616"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="701" r_length="616" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="702" polyA_stop="740"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E538437" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="0.947" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E538437" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106701" e_stop="106617"/>
          <exon e_start="104652" e_stop="104037"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATGATGAACATCCGTAAAGACTTTGTTTCCATACACGGGGAGATGGTTCTTATTAAAAATTATAGCTCATTAAATTTGGCAGGTATAGAGTTTTTCGGTCAATGTTCACTGGGCACTTCGGAAATGTGTTACCCGTGATAGTTATGTGTTTACAGCATCATAGTGTTCTAAGGATTAGAGGATCTCTTCCCTCTCTCTCCCTACATCCATCACGTGCTATTCCTCCTCAAAGTCTTCCCTCTTTCATACTCTTCTTCTTCCACCTAGTCCGCCCAACACCATCCTTTTCCCAATCTGCACGTGTCTTAGACTCTTACCACTTTCTCCACTGTTATTGGTTCCTTATTCCCTATGTGACTCTTACAAGCAACTCATCAAACTACATAAACTGAGGTAAAGATGCAGCTAGAAGATAGAGAAACAGAATGCTACTCCAAAACAATTTTGACTATTACAAATTTAATCCAAGTATTTGGATGCTGTCTTTCTCTTCACTTAACCCCACATTTTCATGATGTTCCGAAAAGGTCCTAAAATACCCTTATACTATTGAATTTGGTACAAAAAAACCCTTCGTTAATGTTTTGGCTCCAAAATACCCCTGACGTCAACATATTGGCTCTAAACTACCCTTATTTTTAAAGGTCCATTTCAAAAATAAAATTAAGAAATTCATTTATTACATGGCACGTTTCTATTGGCTATTTCCAAAATTAACCTAATTGATTAATCTCAAATCAGAATGCAGATCCACCCAATAACCCATATCCGCCCCGCCTAAAAGCCTCTTTAAATCAACAAATTAGCTTTTTTAAGTTGATTACTTTCTATTGAAAATTTCAAATTATTGGGAAAAAAAGCTTCTCAAGAATTTAAAGATAATCAAAACAACAGGGGTTTTTGAAGCAAGAAAGAGTTCTATGTACTGATGCATCAGATGGGTTATTCATAGTTCACCACTAAAATCAATTTCTCAATTTCACGCTCACTCTTCATGTAACTCCAATCCAAGTTCATGAAGATCACAAGGAGAATGTTCAGAGAACTCAAGAAGCTGACATCATTGATATTTTTTAGTCAATGAAGGAGCTTGAAGTTTAAGAATGGAGATCGAAGATAAAATCGAATGATAGACAGAACATAAGACCTGTTGCAAAGATAAAAATGTATGAACTTTTAGAGAAAAATTTCAGCCAAAGAATAAGACGTCTGATGAAAATTTTACCCATATATTTGACAAAATTTAGACGCTAGATTTGGATTTGAAAAGTTACCCTTTTTGACCCAAAATCTTATTGTTGCATTTCAAGAAGCAGACTTGATTGTTAAAACTCAGGTACAGAGAAAAGCCAAGATTGAAGAGAAGATTTTTAGAACCACTAGGAAAAATGAAGAAGATGAAGATAGGGAACCTCATTTAGACGGAGGCGGATATAGGTTATGGGTAGATCCGGATAATGATTTGAGATTAATTAAATAGGTTAATTTAAATAATAGCCAATAGGAATGCGGCACACAATAAATGAATTTATTAATTTTATTTTTGAAGTGGACCGTTAAAAATAAGGGTAATTTAGAGTCAATACTTTGACGTCAGGGGCATTTGGAGCCAAAAGGTTAACGAAGGGTATTTTTGTACCAAATTCGATAGTTTAAGGGTATTTTAGGTCATTTTCCGCATGCGGTTTAATGTTTAACACATTTCCTCCATCTCTGAGTTTCTGTTTTCCCCAATGTCCTTTTCCATTTTCTGATGATGATTCGTTCTTCCTTAATTCTCTTCCTCTACTTCTAATTCCTTCTACCAGTTCACTTTTTCTTTCTGATTTTATACTTTGAGGGGACAACAGATGATCAGTATTAAAGAGAGGAATATGGGTGACGTAAAATTATGGGAGCTAATAGCTCTACTCGGCAAACACAGACAACTCTCACATAACTAGCCATAGTTTAACACGAAAGTAAGATTTCTTGCTTTGGAGGTATAACTACCTCTGATTTCTGCAAGGTCAAGATATCTTCTCTAACAATTTTTTGTTTCATTAGGACTTGTTAAGATATTGAAGAAGTATGACAAACGAACTGGGGGATTGTTGCGTCTTCCTTTTACACAAGTCGCACTTCATCAGCCGATCTTTACTACGGAACCTCTGACGAGATTAGTCCATGAGTGTGAGGCTAATCTTGAGGTCCTATTTCCTTTGGAAGCAGAAGTTGTTGAATCAGCTGTCCCTGCAGATGAACAGATTGGAGCAACTACTTCTTATGCTTCCAATGTTCTCCCTGATACAACATTTCCACAGGGGGAAGAAAATGGGGATATATACCGAAGCACGCTAGCTGCAATAAGAGCCATTCAGGGACTAAAGAAAGCAAGCTCAACACATAACCCGCTGTCATTTTCATCTAATTCTGGGAACCAAGATAATGATAGCCCAGGTGCTGTAACAGCAGAAGACTCCGATTCTGACTCATTGGTTGCCTCTCAGAATGGTGAAGAGATGAATCGTGAAGTTTCCAGTTCACCAAAATAGAGTTGACTGATCTTGTTTTGTTTTGTTCATTATGTAGTGTAGTGCTAAAACTGTGCACTTTCTGTGTTGTGTGCTATAGGTCTGAATAACTGCTTACCCAATCAATAATATAAAGAAATTAACTTTAA</genome_strand>
        <mrna_strand>GAAATGATGAACATCCGTAAAGACTTTGTTTCCATACACGGGGAGATGGTTCTTCTGAAAAATTATAGCTCATTAAATTTTGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGTTAAGATATTGAAGAAGTATGCCAAACGAACTGGGGGATTGTTGCGTCTTCCTTTTACACAAGTCGCACTTCATCAGCCGATCTTTATTACGGAACCTCTGACGAGATTAGTCCATGAGTGTGAGGCTAATCTTGAGGTCCTATTTCCTTTGGAAGCAGAAGTTGTTGAATCAGCTGTCCCTGCAGATGAACAGATTGGAGCAACTACTTCTTATGCTTCCAATGTTCTCCCTGATACAACATTTCCCCAGGGGGAAGAAAATGGGGATATATACCGAAGCACGCTAGCTGCAATAAGAGCCATTCAGGGACTAAAGAAAGCAAGCTCAACACATAACCCGCTGTCATTTTCATCTAATTCTGGGAACCAAGATAATGATAGCCCAGGTGCTGTAACAGCAGAAGACTCCGATTTTGACTCATTGGTTGCCTCTCAGAATGGTGAAGAGATGAATCGTGAAGTTTCCAGTTCACCAAAATAGAGTTGACTGATCTTGTTTTGTTTTGTTCATTATGTAGGGTAGTGCTAAAACTGTGCACTTTCTGTGTTGTGTGCTATAGGTCTGAATAACTGCTTACCCAATCAATAATATAAAGAAATTAACTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E731062" ref_strand="+" ref_description="SGN-E731062 [LA26AB06]">
      <seq>gtttagacgaatttgtataaaatcaagcgattgccggtgatatgaaattcgggaaagaattcagcatccatttggaagaaaccctacctgaatggagggataaatacttgtgttacaagccgttgaagaagcttatcaagcacatcccttcttccaccgccgataatacacctccgttaccgccgctgccgccggcgacggcagccgcgacggagctacaggattggtttatcagaattctcaatgaggaactcgacaagttcaacgatttctacgtggataaagaagaagacttcattatccgtttccaggaactgaaggaaagaattgaacgtgtgaaggagaagagcgacaaagatggagttcttgcaacaaacaatgaattcagtgaagaaatgatgaacatccgtaaagactttgtttccatacacggggagatggttcttctgaaaaattatagctcattaaattttgcaggacttgttaagatattgaagaagtatgacaaacgaactgggggattgttgcgtcttccttttacacaagtcgcacttcatcagccgatctttactacggaacctctgacgagattagtccatgagtgtgaggctaatcttgaggtcctatttcctttggaagcagaagttgttgaatcagctgtccctgcagatgaacagattggagcaactacttcttatgcttccaatgttctccctgatacaacatttccacaggggggagaaaatggggatatataccgaagcacgctagctgcaataagagccattcagggact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="111185" stop="104034"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110885" g_stop="110575" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="311" r_length="311" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110574" i_stop="106783" i_length="3792">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106782" g_stop="106617" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="477" r_length="166" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106616" i_stop="104653" i_length="1964">
            <donor d_prob="0.019" d_score="0.94"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104652" g_stop="104334" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="796" r_length="319" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E731062" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>796</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E731062" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110885" e_stop="110575"/>
          <exon e_start="106782" e_stop="106617"/>
          <exon e_start="104652" e_stop="104334"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTAGACGAATTTGTATAAAATCAAGCGATTGCCGGTGATATGAAATTCGGGAAAGAATTCAGCATCCATTTGGAAGAAACCCTACCTGAATGGAGGGATAAATACTTGTGTTACAAGCCGTTGAAGAAGCTTATCAAGCACATCCCTTCTTCCACCGCCGATAATACACCTCCGTTACCGCCGCTGCCGCCGGCGACGGCAGCCGCGACGGAGCTACAGGATTGGTTTATCAGAATTCTCAATGAGGAACTCGACAAGTTCAACGATTTCTACGTGGATAAAGAAGAAGACTTCATTATCCGTTTCCAGGTTTCGTTTTTTTTTTCTTTTCTATTTTAAAAAAATAAAATAAAAATCTTCGCTTTGCCTGTTTGTAATTCTGAAATTTAAATTTTTGTTTACAGATTCCCGTTAAAAAATTCAATTTTTGTTTTGGTGTGAAGAGACTGCGTAATTGTTACGCTTGATTGGTTTGATTAATTTAAAACTTGAACAGAATTTTACAGTTGATAAGCTCAGCTTACAATTTTCTTCATTTCAATCACTTGGATAATTACACCTTGATTCTGGATTAGTTGTGGTCAACTTGCATGAATCCGTTATATCCATTGCGCTTTGTTGAAGTCCTAAAAACCAAAATTTCATCAGAATTTTTACTTAATGATTTGCATAAATTGGATCAAGTTGTTAGCTTTTGATGGATCTGGGAATGTGAAGGTTTTAAGGAATATGTTTCTGGTGTTTACGTGTTGTATTATTTGTAGCTTATTGTCGTAGAGAGGGATAAATGTACTGCCACTTCTGTGAGCGGCAATTAGTACGTGGTGAGCGGTGAGATAAAGGATGGAGGAATTGAAGAATATATATTTTTAGATATTCAAGAGTACTAGGATTTGTTTAAGTGACAAAGTCTCTCTTTTTGATGGATATGCTGCTGTAACATTTGATGTGTAAACGGAGAAGTAAATCACTATATGAATCACAACAAAGGCCAAAAAATGTAAATGCAACTATGACGAACTTAAGAGCAATGCCAATAAATGATGGTCCCTTGTGGACTTCAGATGGATGGTTCAAGTGATTGAGAGGAGATATATATACACGACATACCCCAAAAATAGAAGCAAATAGTTGGGTGCTGGTGGAGGGAAATAGTATGACATGAGCTTCCTGGAGAATATTCTTAGTAAAGCTGGGGATATAGAAGTATCTTAATGGCATATTCCCCCTACTGCCTTTATAATTTGTTGAGCTGATTTGACCAAGGAAATGCCAAACACTAAACATCAGAATATCTCTGGCTTTATCATATAACACTAACACCCGACCGAACAGATTACAACGACATACCTAGTGTAATCCCACAAGTCAGGTCTAGGAAGGGTAAGGCGTATGCAAACCTTACTACATTGGGAGGTAGAAAGGTTGTTTTCTATTGGCCCTCGGCTCAAGCAAAAAGCATCTCAAAGTAGTTTGAAAAAGAAATAACGGAAGTAAAGAAATTATGGAGAAATAGTATAGAGAGCATGTCAAAATATTCTGAAAAAGAACAATAACTTCAACAAATTAGTGCGATAATCGAATACAAGAGACCACAAATAGTGACAGAAATCAAAGGACAAAAACTACAAGAGAAGTACTACTACTACTAGTATGGAAGGATAAATAAGACAACACTCTACTATCTTTCTACCACGATCCTTGTCCTCTACAACCTCCTATCTAAGGTTATGTCCTTGGTAAGCAGCTACTTGTTCTAGTAAATTCTCCAGAAAAATATTTGTACTCTTAAATGTTCACCCTTTCTTCAAGTCCAATGAAGAAAATTTTCTATTAGGCAACTCGGAGTTAGGGTGCTTGACTAAACTGTTAGATCAACCACCTATGATCCTCCACACAACATGGAAACTAGGCTTGGGTTGCCTAAACAAGCAGGACACTTTGTGAGCTTATCATTTTCTAGTTTCTTTGAAGCTTTGTTGCATCATTGTTACTCAGCGTGGAGACTAGTTGGGATTGTTTGTCTTCTTGTCCTGCTACTTTTGATGAAGGCTGCCTAACCAATAAATATCAAAATTTTCTTGATCAAGTGTTAATAACTATCTAATTAGTTCTTTGCCTAATAAAAATAAAACTATCAGTCAAATTAGTTTTAGGATATTTGACCACACTTATCGGCGTTGTTGCTGATGTGGCCCCAAGTACTAGATTAAATAAGAAAGACATTCATATATTGAATATTATAAGAGAAATAGTTTATTGACTTTTGTATGACTTCGATAGCGTGGAACTGGCATAGTCTGTGTTGTACAGCTTTCTTCTTGTCTTGTTCAGACAAAAAAGTAATGTATATAATTATTTAAATAACATCTCCATTAATAAATTTCACGATATTTAACGCAATCAGAGAATAAACATAAACCTAAATTCAAATTGTTACTGTATGAAACACCTCATTTTGTACTTACCATGTGAAAAAATTAAATCTCACACCCACTAATAAAACTAAACATTCAGTAGAAACAATTGATTCTCTCTGTTAAATACCACTTTATTCTTTAGATTGCCTTATAGTCAATGCTTCCCAGTCTGTTGCATATATTTTTACTCTCATTTAACTAAAAAGTGAAAAAAGTTCCATAATACTAACCTCTTGTACTTGCCCATATTACTTATATGGGGGTGACTCACTTCACTTCTGCCGTTTCCAAAGCTGGTCTCGATCCTCAAAACCCGGCAGTCAACCCCTCCCTTGGCCGGTTCATGAGGTGTACTAGTAGTTAGGGAATTGCATGCATACTGAATACGTCATTTGGTTAATCATAAACTGGGACCAAGTTTCTTTTGAAAATGATTGGATCCAATGATGACCTTGGTCTTTAACTTTTCTTCATCTGGATCAGAATATGATACATTTCAGAACAAATGGGGTGGGTTCGTAACTCTTTTATCTGGTACCTGTGTCCGTGAGGGCTTTGGATGGAGCATGTCATCCGCCTTAGTCCAGGATTAGGATTGGTAGTTGGTGAAAGGAGTTATTATATGATATCTGGTGTCAGAAGTAACCAAATGCCTTTAACATATATATAACACATATAAGGTTCACTGTTACACTCCATAATATATAATTATGCAGGATTTCTTTGTCCCATCAGCCTTTACTACATAAGGCATCATGAGTAAATTGTAGCATAAAGACTCGAATATGGCAATCATTCTAGAGAACTTTGTTACTGAAAAGTGCAAACTGAAGTTGTCAAGTTTTAGTATGAAGCCCTTATAATTGCATATTCAATCTGCAACTGTCCTATTCAGGCCTGAATATACATTTACAATCGAATTTTGACTTCACATTCAATGACATGAAAGTAATATTGTCGTCATCATGCCTGGTTCGTGACCAAGTTCATCAATTACAAACATTACGTAGTTTGGCACTGGAATGTGGAGTCAAGTAACTATCAAAATGTTTACTTTTTGGGTAATCCATAATGAAATGAGATATGGCAGTGGAAGGATTCCAGGAAAGCTGCGGGTGTGTTAATGATGGACGTGACTGGTGAATTTGAAATTTAGATTGAAGTAGGAAGGTAAGACAGGGGTGGCGGAGCTACAGTTTTGTTGGCCAACTAAACAACAATTGTGGCTGGTGCACAGTGGAGACAGCATGGTAAATGCTTTCTCTGGTATGGGGTTCTGTGATTCTTGAAGGTCTGCGGTCGAGTGAGTTATTTGGTTGTAGAGGATGAAAATGTAATTTGTAGTGGGCCTGGTGGCCGCTTCAAAAGTTGTGGAGGCAGACAGTGGAACAGGATGCATTTTTCAGTTTGGAACTTATGGGCGCATTTTCTGAATTTTTGACTCATATTCCAATATGTGATTTTAGAAGGGCACTGAAAATGGACAGTGTTATCTTTTTCCGTATCTTAATGGAGGGGTAGACATTGGAAGGATGCAAGAATGAGTGTGTAAGATATCAACGTAGAAACAGAATGAGAGTCATCGTATTGCAGTATTATATTCTTAAAGATATTTGTAATACATAGCGAGTCTCAAATTGCTAGTGTGGATTTTGATTTTTTTTCTCTACTTGTATAACAGGAACTGAAGGAAAGAATTGAACGTGTGAAGGAGAAGAGCGACAAAGATGGAGTTCTTGCAACAAACAATGAATTCAGTGAAGAAATGATGAACATCCGTAAAGACTTTGTTTCCATACACGGGGAGATGGTTCTTATTAAAAATTATAGCTCATTAAATTTGGCAGGTATAGAGTTTTTCGGTCAATGTTCACTGGGCACTTCGGAAATGTGTTACCCGTGATAGTTATGTGTTTACAGCATCATAGTGTTCTAAGGATTAGAGGATCTCTTCCCTCTCTCTCCCTACATCCATCACGTGCTATTCCTCCTCAAAGTCTTCCCTCTTTCATACTCTTCTTCTTCCACCTAGTCCGCCCAACACCATCCTTTTCCCAATCTGCACGTGTCTTAGACTCTTACCACTTTCTCCACTGTTATTGGTTCCTTATTCCCTATGTGACTCTTACAAGCAACTCATCAAACTACATAAACTGAGGTAAAGATGCAGCTAGAAGATAGAGAAACAGAATGCTACTCCAAAACAATTTTGACTATTACAAATTTAATCCAAGTATTTGGATGCTGTCTTTCTCTTCACTTAACCCCACATTTTCATGATGTTCCGAAAAGGTCCTAAAATACCCTTATACTATTGAATTTGGTACAAAAAAACCCTTCGTTAATGTTTTGGCTCCAAAATACCCCTGACGTCAACATATTGGCTCTAAACTACCCTTATTTTTAAAGGTCCATTTCAAAAATAAAATTAAGAAATTCATTTATTACATGGCACGTTTCTATTGGCTATTTCCAAAATTAACCTAATTGATTAATCTCAAATCAGAATGCAGATCCACCCAATAACCCATATCCGCCCCGCCTAAAAGCCTCTTTAAATCAACAAATTAGCTTTTTTAAGTTGATTACTTTCTATTGAAAATTTCAAATTATTGGGAAAAAAAGCTTCTCAAGAATTTAAAGATAATCAAAACAACAGGGGTTTTTGAAGCAAGAAAGAGTTCTATGTACTGATGCATCAGATGGGTTATTCATAGTTCACCACTAAAATCAATTTCTCAATTTCACGCTCACTCTTCATGTAACTCCAATCCAAGTTCATGAAGATCACAAGGAGAATGTTCAGAGAACTCAAGAAGCTGACATCATTGATATTTTTTAGTCAATGAAGGAGCTTGAAGTTTAAGAATGGAGATCGAAGATAAAATCGAATGATAGACAGAACATAAGACCTGTTGCAAAGATAAAAATGTATGAACTTTTAGAGAAAAATTTCAGCCAAAGAATAAGACGTCTGATGAAAATTTTACCCATATATTTGACAAAATTTAGACGCTAGATTTGGATTTGAAAAGTTACCCTTTTTGACCCAAAATCTTATTGTTGCATTTCAAGAAGCAGACTTGATTGTTAAAACTCAGGTACAGAGAAAAGCCAAGATTGAAGAGAAGATTTTTAGAACCACTAGGAAAAATGAAGAAGATGAAGATAGGGAACCTCATTTAGACGGAGGCGGATATAGGTTATGGGTAGATCCGGATAATGATTTGAGATTAATTAAATAGGTTAATTTAAATAATAGCCAATAGGAATGCGGCACACAATAAATGAATTTATTAATTTTATTTTTGAAGTGGACCGTTAAAAATAAGGGTAATTTAGAGTCAATACTTTGACGTCAGGGGCATTTGGAGCCAAAAGGTTAACGAAGGGTATTTTTGTACCAAATTCGATAGTTTAAGGGTATTTTAGGTCATTTTCCGCATGCGGTTTAATGTTTAACACATTTCCTCCATCTCTGAGTTTCTGTTTTCCCCAATGTCCTTTTCCATTTTCTGATGATGATTCGTTCTTCCTTAATTCTCTTCCTCTACTTCTAATTCCTTCTACCAGTTCACTTTTTCTTTCTGATTTTATACTTTGAGGGGACAACAGATGATCAGTATTAAAGAGAGGAATATGGGTGACGTAAAATTATGGGAGCTAATAGCTCTACTCGGCAAACACAGACAACTCTCACATAACTAGCCATAGTTTAACACGAAAGTAAGATTTCTTGCTTTGGAGGTATAACTACCTCTGATTTCTGCAAGGTCAAGATATCTTCTCTAACAATTTTTTGTTTCATTAGGACTTGTTAAGATATTGAAGAAGTATGACAAACGAACTGGGGGATTGTTGCGTCTTCCTTTTACACAAGTCGCACTTCATCAGCCGATCTTTACTACGGAACCTCTGACGAGATTAGTCCATGAGTGTGAGGCTAATCTTGAGGTCCTATTTCCTTTGGAAGCAGAAGTTGTTGAATCAGCTGTCCCTGCAGATGAACAGATTGGAGCAACTACTTCTTATGCTTCCAATGTTCTCCCTGATACAACATTTCCACAGGGGGAAGAAAATGGGGATATATACCGAAGCACGCTAGCTGCAATAAGAGCCATTCAGGGACT</genome_strand>
        <mrna_strand>GTTTAGACGAATTTGTATAAAATCAAGCGATTGCCGGTGATATGAAATTCGGGAAAGAATTCAGCATCCATTTGGAAGAAACCCTACCTGAATGGAGGGATAAATACTTGTGTTACAAGCCGTTGAAGAAGCTTATCAAGCACATCCCTTCTTCCACCGCCGATAATACACCTCCGTTACCGCCGCTGCCGCCGGCGACGGCAGCCGCGACGGAGCTACAGGATTGGTTTATCAGAATTCTCAATGAGGAACTCGACAAGTTCAACGATTTCTACGTGGATAAAGAAGAAGACTTCATTATCCGTTTCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTGAAGGAAAGAATTGAACGTGTGAAGGAGAAGAGCGACAAAGATGGAGTTCTTGCAACAAACAATGAATTCAGTGAAGAAATGATGAACATCCGTAAAGACTTTGTTTCCATACACGGGGAGATGGTTCTTCTGAAAAATTATAGCTCATTAAATTTTGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGTTAAGATATTGAAGAAGTATGACAAACGAACTGGGGGATTGTTGCGTCTTCCTTTTACACAAGTCGCACTTCATCAGCCGATCTTTACTACGGAACCTCTGACGAGATTAGTCCATGAGTGTGAGGCTAATCTTGAGGTCCTATTTCCTTTGGAAGCAGAAGTTGTTGAATCAGCTGTCCCTGCAGATGAACAGATTGGAGCAACTACTTCTTATGCTTCCAATGTTCTCCCTGATACAACATTTCCACAGGGGGGAGAAAATGGGGATATATACCGAAGCACGCTAGCTGCAATAAGAGCCATTCAGGGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E737352" ref_strand="+" ref_description="SGN-E737352 [LC09BH11]">
      <seq>ctgtatatcctaaactcaaaattgctaattctttgtgagaatctaacatttttgtaaaattttgaactatatgttattggatttcaagaactccaaaaaaaagcaaaattctgtttaaaaatcagtgtgtttagacgaatttgtataaaatcaagcgattgccggtgatatgaaattcgggaaagaattcagcatccatttggaagaaaccctacctgaatggagggataaatacttgtgttacaagccgttgaagaagcttatcaagcacatcccttcttccaccgccgataatacacctccgttaccgccgctgccgccggcgacggcagccgcgacggagctacaggattggtttatcagaattctcaatgaggaactcgacaagttcaacgatttctacgtggataaagaagaagacttcattatccgtttccaggaactgaaggaaagaattgaacgtgtgaaggagaagagcgacaaagatggagttcttgcaacaaacaatgaattcagtgaagaaatgatgaacatccgtaaagactttgtttccatacacggggagatggttcttctgaaaaattatagctcattaaattttgcaggacttgttaagatattgaagaagtatgacaaacgaactgggggattgttgcgtcttccttttacacaagtcgcacttcatcagccgatctttactacggaacctctgacgagattagtccatgagtgtgaggctaatcttgaggtcctatttcctttggaagcagaagttgttgaatcagctgtccctgcagatgaacagattggaacaactacttcttatgcttccaatgttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="111312" stop="104117"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111013" g_stop="110575" g_length="439"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="439" r_length="439" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110574" i_stop="106783" i_length="3792">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106782" g_stop="106617" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="605" r_length="166" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106616" i_stop="104653" i_length="1964">
            <donor d_prob="0.019" d_score="0.94"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104652" g_stop="104417" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="606" r_stop="841" r_length="236" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E737352" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>841</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737352" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111013" e_stop="110575"/>
          <exon e_start="106782" e_stop="106617"/>
          <exon e_start="104652" e_stop="104417"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCATATCCTAAACTCAAAATTGCTAATTCTTTGTGAGAATCTAACATTTTTGTAAAATTTTGAACTATATGTTATTGGATTTCAAGAACTCCAAAAAAAAGCAAAATTCTGTTTAAAAATCAGTGTGTTTAGACGAATTTGTATAAAATCAAGCGATTGCCGGTGATATGAAATTCGGGAAAGAATTCAGCATCCATTTGGAAGAAACCCTACCTGAATGGAGGGATAAATACTTGTGTTACAAGCCGTTGAAGAAGCTTATCAAGCACATCCCTTCTTCCACCGCCGATAATACACCTCCGTTACCGCCGCTGCCGCCGGCGACGGCAGCCGCGACGGAGCTACAGGATTGGTTTATCAGAATTCTCAATGAGGAACTCGACAAGTTCAACGATTTCTACGTGGATAAAGAAGAAGACTTCATTATCCGTTTCCAGGTTTCGTTTTTTTTTTCTTTTCTATTTTAAAAAAATAAAATAAAAATCTTCGCTTTGCCTGTTTGTAATTCTGAAATTTAAATTTTTGTTTACAGATTCCCGTTAAAAAATTCAATTTTTGTTTTGGTGTGAAGAGACTGCGTAATTGTTACGCTTGATTGGTTTGATTAATTTAAAACTTGAACAGAATTTTACAGTTGATAAGCTCAGCTTACAATTTTCTTCATTTCAATCACTTGGATAATTACACCTTGATTCTGGATTAGTTGTGGTCAACTTGCATGAATCCGTTATATCCATTGCGCTTTGTTGAAGTCCTAAAAACCAAAATTTCATCAGAATTTTTACTTAATGATTTGCATAAATTGGATCAAGTTGTTAGCTTTTGATGGATCTGGGAATGTGAAGGTTTTAAGGAATATGTTTCTGGTGTTTACGTGTTGTATTATTTGTAGCTTATTGTCGTAGAGAGGGATAAATGTACTGCCACTTCTGTGAGCGGCAATTAGTACGTGGTGAGCGGTGAGATAAAGGATGGAGGAATTGAAGAATATATATTTTTAGATATTCAAGAGTACTAGGATTTGTTTAAGTGACAAAGTCTCTCTTTTTGATGGATATGCTGCTGTAACATTTGATGTGTAAACGGAGAAGTAAATCACTATATGAATCACAACAAAGGCCAAAAAATGTAAATGCAACTATGACGAACTTAAGAGCAATGCCAATAAATGATGGTCCCTTGTGGACTTCAGATGGATGGTTCAAGTGATTGAGAGGAGATATATATACACGACATACCCCAAAAATAGAAGCAAATAGTTGGGTGCTGGTGGAGGGAAATAGTATGACATGAGCTTCCTGGAGAATATTCTTAGTAAAGCTGGGGATATAGAAGTATCTTAATGGCATATTCCCCCTACTGCCTTTATAATTTGTTGAGCTGATTTGACCAAGGAAATGCCAAACACTAAACATCAGAATATCTCTGGCTTTATCATATAACACTAACACCCGACCGAACAGATTACAACGACATACCTAGTGTAATCCCACAAGTCAGGTCTAGGAAGGGTAAGGCGTATGCAAACCTTACTACATTGGGAGGTAGAAAGGTTGTTTTCTATTGGCCCTCGGCTCAAGCAAAAAGCATCTCAAAGTAGTTTGAAAAAGAAATAACGGAAGTAAAGAAATTATGGAGAAATAGTATAGAGAGCATGTCAAAATATTCTGAAAAAGAACAATAACTTCAACAAATTAGTGCGATAATCGAATACAAGAGACCACAAATAGTGACAGAAATCAAAGGACAAAAACTACAAGAGAAGTACTACTACTACTAGTATGGAAGGATAAATAAGACAACACTCTACTATCTTTCTACCACGATCCTTGTCCTCTACAACCTCCTATCTAAGGTTATGTCCTTGGTAAGCAGCTACTTGTTCTAGTAAATTCTCCAGAAAAATATTTGTACTCTTAAATGTTCACCCTTTCTTCAAGTCCAATGAAGAAAATTTTCTATTAGGCAACTCGGAGTTAGGGTGCTTGACTAAACTGTTAGATCAACCACCTATGATCCTCCACACAACATGGAAACTAGGCTTGGGTTGCCTAAACAAGCAGGACACTTTGTGAGCTTATCATTTTCTAGTTTCTTTGAAGCTTTGTTGCATCATTGTTACTCAGCGTGGAGACTAGTTGGGATTGTTTGTCTTCTTGTCCTGCTACTTTTGATGAAGGCTGCCTAACCAATAAATATCAAAATTTTCTTGATCAAGTGTTAATAACTATCTAATTAGTTCTTTGCCTAATAAAAATAAAACTATCAGTCAAATTAGTTTTAGGATATTTGACCACACTTATCGGCGTTGTTGCTGATGTGGCCCCAAGTACTAGATTAAATAAGAAAGACATTCATATATTGAATATTATAAGAGAAATAGTTTATTGACTTTTGTATGACTTCGATAGCGTGGAACTGGCATAGTCTGTGTTGTACAGCTTTCTTCTTGTCTTGTTCAGACAAAAAAGTAATGTATATAATTATTTAAATAACATCTCCATTAATAAATTTCACGATATTTAACGCAATCAGAGAATAAACATAAACCTAAATTCAAATTGTTACTGTATGAAACACCTCATTTTGTACTTACCATGTGAAAAAATTAAATCTCACACCCACTAATAAAACTAAACATTCAGTAGAAACAATTGATTCTCTCTGTTAAATACCACTTTATTCTTTAGATTGCCTTATAGTCAATGCTTCCCAGTCTGTTGCATATATTTTTACTCTCATTTAACTAAAAAGTGAAAAAAGTTCCATAATACTAACCTCTTGTACTTGCCCATATTACTTATATGGGGGTGACTCACTTCACTTCTGCCGTTTCCAAAGCTGGTCTCGATCCTCAAAACCCGGCAGTCAACCCCTCCCTTGGCCGGTTCATGAGGTGTACTAGTAGTTAGGGAATTGCATGCATACTGAATACGTCATTTGGTTAATCATAAACTGGGACCAAGTTTCTTTTGAAAATGATTGGATCCAATGATGACCTTGGTCTTTAACTTTTCTTCATCTGGATCAGAATATGATACATTTCAGAACAAATGGGGTGGGTTCGTAACTCTTTTATCTGGTACCTGTGTCCGTGAGGGCTTTGGATGGAGCATGTCATCCGCCTTAGTCCAGGATTAGGATTGGTAGTTGGTGAAAGGAGTTATTATATGATATCTGGTGTCAGAAGTAACCAAATGCCTTTAACATATATATAACACATATAAGGTTCACTGTTACACTCCATAATATATAATTATGCAGGATTTCTTTGTCCCATCAGCCTTTACTACATAAGGCATCATGAGTAAATTGTAGCATAAAGACTCGAATATGGCAATCATTCTAGAGAACTTTGTTACTGAAAAGTGCAAACTGAAGTTGTCAAGTTTTAGTATGAAGCCCTTATAATTGCATATTCAATCTGCAACTGTCCTATTCAGGCCTGAATATACATTTACAATCGAATTTTGACTTCACATTCAATGACATGAAAGTAATATTGTCGTCATCATGCCTGGTTCGTGACCAAGTTCATCAATTACAAACATTACGTAGTTTGGCACTGGAATGTGGAGTCAAGTAACTATCAAAATGTTTACTTTTTGGGTAATCCATAATGAAATGAGATATGGCAGTGGAAGGATTCCAGGAAAGCTGCGGGTGTGTTAATGATGGACGTGACTGGTGAATTTGAAATTTAGATTGAAGTAGGAAGGTAAGACAGGGGTGGCGGAGCTACAGTTTTGTTGGCCAACTAAACAACAATTGTGGCTGGTGCACAGTGGAGACAGCATGGTAAATGCTTTCTCTGGTATGGGGTTCTGTGATTCTTGAAGGTCTGCGGTCGAGTGAGTTATTTGGTTGTAGAGGATGAAAATGTAATTTGTAGTGGGCCTGGTGGCCGCTTCAAAAGTTGTGGAGGCAGACAGTGGAACAGGATGCATTTTTCAGTTTGGAACTTATGGGCGCATTTTCTGAATTTTTGACTCATATTCCAATATGTGATTTTAGAAGGGCACTGAAAATGGACAGTGTTATCTTTTTCCGTATCTTAATGGAGGGGTAGACATTGGAAGGATGCAAGAATGAGTGTGTAAGATATCAACGTAGAAACAGAATGAGAGTCATCGTATTGCAGTATTATATTCTTAAAGATATTTGTAATACATAGCGAGTCTCAAATTGCTAGTGTGGATTTTGATTTTTTTTCTCTACTTGTATAACAGGAACTGAAGGAAAGAATTGAACGTGTGAAGGAGAAGAGCGACAAAGATGGAGTTCTTGCAACAAACAATGAATTCAGTGAAGAAATGATGAACATCCGTAAAGACTTTGTTTCCATACACGGGGAGATGGTTCTTATTAAAAATTATAGCTCATTAAATTTGGCAGGTATAGAGTTTTTCGGTCAATGTTCACTGGGCACTTCGGAAATGTGTTACCCGTGATAGTTATGTGTTTACAGCATCATAGTGTTCTAAGGATTAGAGGATCTCTTCCCTCTCTCTCCCTACATCCATCACGTGCTATTCCTCCTCAAAGTCTTCCCTCTTTCATACTCTTCTTCTTCCACCTAGTCCGCCCAACACCATCCTTTTCCCAATCTGCACGTGTCTTAGACTCTTACCACTTTCTCCACTGTTATTGGTTCCTTATTCCCTATGTGACTCTTACAAGCAACTCATCAAACTACATAAACTGAGGTAAAGATGCAGCTAGAAGATAGAGAAACAGAATGCTACTCCAAAACAATTTTGACTATTACAAATTTAATCCAAGTATTTGGATGCTGTCTTTCTCTTCACTTAACCCCACATTTTCATGATGTTCCGAAAAGGTCCTAAAATACCCTTATACTATTGAATTTGGTACAAAAAAACCCTTCGTTAATGTTTTGGCTCCAAAATACCCCTGACGTCAACATATTGGCTCTAAACTACCCTTATTTTTAAAGGTCCATTTCAAAAATAAAATTAAGAAATTCATTTATTACATGGCACGTTTCTATTGGCTATTTCCAAAATTAACCTAATTGATTAATCTCAAATCAGAATGCAGATCCACCCAATAACCCATATCCGCCCCGCCTAAAAGCCTCTTTAAATCAACAAATTAGCTTTTTTAAGTTGATTACTTTCTATTGAAAATTTCAAATTATTGGGAAAAAAAGCTTCTCAAGAATTTAAAGATAATCAAAACAACAGGGGTTTTTGAAGCAAGAAAGAGTTCTATGTACTGATGCATCAGATGGGTTATTCATAGTTCACCACTAAAATCAATTTCTCAATTTCACGCTCACTCTTCATGTAACTCCAATCCAAGTTCATGAAGATCACAAGGAGAATGTTCAGAGAACTCAAGAAGCTGACATCATTGATATTTTTTAGTCAATGAAGGAGCTTGAAGTTTAAGAATGGAGATCGAAGATAAAATCGAATGATAGACAGAACATAAGACCTGTTGCAAAGATAAAAATGTATGAACTTTTAGAGAAAAATTTCAGCCAAAGAATAAGACGTCTGATGAAAATTTTACCCATATATTTGACAAAATTTAGACGCTAGATTTGGATTTGAAAAGTTACCCTTTTTGACCCAAAATCTTATTGTTGCATTTCAAGAAGCAGACTTGATTGTTAAAACTCAGGTACAGAGAAAAGCCAAGATTGAAGAGAAGATTTTTAGAACCACTAGGAAAAATGAAGAAGATGAAGATAGGGAACCTCATTTAGACGGAGGCGGATATAGGTTATGGGTAGATCCGGATAATGATTTGAGATTAATTAAATAGGTTAATTTAAATAATAGCCAATAGGAATGCGGCACACAATAAATGAATTTATTAATTTTATTTTTGAAGTGGACCGTTAAAAATAAGGGTAATTTAGAGTCAATACTTTGACGTCAGGGGCATTTGGAGCCAAAAGGTTAACGAAGGGTATTTTTGTACCAAATTCGATAGTTTAAGGGTATTTTAGGTCATTTTCCGCATGCGGTTTAATGTTTAACACATTTCCTCCATCTCTGAGTTTCTGTTTTCCCCAATGTCCTTTTCCATTTTCTGATGATGATTCGTTCTTCCTTAATTCTCTTCCTCTACTTCTAATTCCTTCTACCAGTTCACTTTTTCTTTCTGATTTTATACTTTGAGGGGACAACAGATGATCAGTATTAAAGAGAGGAATATGGGTGACGTAAAATTATGGGAGCTAATAGCTCTACTCGGCAAACACAGACAACTCTCACATAACTAGCCATAGTTTAACACGAAAGTAAGATTTCTTGCTTTGGAGGTATAACTACCTCTGATTTCTGCAAGGTCAAGATATCTTCTCTAACAATTTTTTGTTTCATTAGGACTTGTTAAGATATTGAAGAAGTATGACAAACGAACTGGGGGATTGTTGCGTCTTCCTTTTACACAAGTCGCACTTCATCAGCCGATCTTTACTACGGAACCTCTGACGAGATTAGTCCATGAGTGTGAGGCTAATCTTGAGGTCCTATTTCCTTTGGAAGCAGAAGTTGTTGAATCAGCTGTCCCTGCAGATGAACAGATTGGAGCAACTACTTCTTATGCTTCCAATGTTCTC</genome_strand>
        <mrna_strand>CTGTATATCCTAAACTCAAAATTGCTAATTCTTTGTGAGAATCTAACATTTTTGTAAAATTTTGAACTATATGTTATTGGATTTCAAGAACTCCAAAAAAAAGCAAAATTCTGTTTAAAAATCAGTGTGTTTAGACGAATTTGTATAAAATCAAGCGATTGCCGGTGATATGAAATTCGGGAAAGAATTCAGCATCCATTTGGAAGAAACCCTACCTGAATGGAGGGATAAATACTTGTGTTACAAGCCGTTGAAGAAGCTTATCAAGCACATCCCTTCTTCCACCGCCGATAATACACCTCCGTTACCGCCGCTGCCGCCGGCGACGGCAGCCGCGACGGAGCTACAGGATTGGTTTATCAGAATTCTCAATGAGGAACTCGACAAGTTCAACGATTTCTACGTGGATAAAGAAGAAGACTTCATTATCCGTTTCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTGAAGGAAAGAATTGAACGTGTGAAGGAGAAGAGCGACAAAGATGGAGTTCTTGCAACAAACAATGAATTCAGTGAAGAAATGATGAACATCCGTAAAGACTTTGTTTCCATACACGGGGAGATGGTTCTTCTGAAAAATTATAGCTCATTAAATTTTGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGTTAAGATATTGAAGAAGTATGACAAACGAACTGGGGGATTGTTGCGTCTTCCTTTTACACAAGTCGCACTTCATCAGCCGATCTTTACTACGGAACCTCTGACGAGATTAGTCCATGAGTGTGAGGCTAATCTTGAGGTCCTATTTCCTTTGGAAGCAGAAGTTGTTGAATCAGCTGTCCCTGCAGATGAACAGATTGGAACAACTACTTCTTATGCTTCCAATGTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E730153" ref_strand="+" ref_description="SGN-E730153 [LA23AH10]">
      <seq>cggctggtgggtgagggaattgcatatcctaaactcaaaattgctaattctttgtgagaatctaacatttttgtaaaattttgaactatatgttattggatttcaagaactccaaaaaaaagcaaaattctgtttaaaaatcaatgtgtttaaacaaatttgtataaaatcaagcgattgccggtgatatgaaattcgggaaagaattcagcatccatttggaagaaaccctacctgaatggagggataaatacttgtgttacaagccgttgaagaagcttatcaagcacatcccttcttccaccgccgataatacacctccgttaccgccgctgccgccggcgacggcagccgcgacggagctacaggattggtttatcagaattctcaatgaggaactcgacaagttcaacgatttctacgtggataaagaagaagacttcattatccgtttccaggaactgaaggaaagaattgaacgtgtgaaggataagagcgacaaagatggagttcttgcaacaaacaatgaattcagtgaagaaatgatgaacatccgtaaagactttgtttccatacacggggagatggttcttctgaaaaattatagctcattaaattttgcaggacttgttaagatattgaagaagtatgacaaacgaactgggggattgttgcgtcttccttttacacaagtcgcacttcatcagccgatctttactacggaacctctgacgagattagtccatgagtgtgaggctaatcttgaggtcctatttcctttgcaagcagaagttgttgaatcagctgtccctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="111331" stop="104163"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111032" g_stop="110575" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="458" r_length="458" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110574" i_stop="106783" i_length="3792">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106782" g_stop="106617" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="624" r_length="166" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106616" i_stop="104653" i_length="1964">
            <donor d_prob="0.019" d_score="0.94"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104652" g_stop="104463" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="625" r_stop="814" r_length="190" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E730153" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>814</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E730153" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111032" e_stop="110575"/>
          <exon e_start="106782" e_stop="106617"/>
          <exon e_start="104652" e_stop="104463"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTTGGTGGGTGAGGGAATTGCATATCCTAAACTCAAAATTGCTAATTCTTTGTGAGAATCTAACATTTTTGTAAAATTTTGAACTATATGTTATTGGATTTCAAGAACTCCAAAAAAAAGCAAAATTCTGTTTAAAAATCAGTGTGTTTAGACGAATTTGTATAAAATCAAGCGATTGCCGGTGATATGAAATTCGGGAAAGAATTCAGCATCCATTTGGAAGAAACCCTACCTGAATGGAGGGATAAATACTTGTGTTACAAGCCGTTGAAGAAGCTTATCAAGCACATCCCTTCTTCCACCGCCGATAATACACCTCCGTTACCGCCGCTGCCGCCGGCGACGGCAGCCGCGACGGAGCTACAGGATTGGTTTATCAGAATTCTCAATGAGGAACTCGACAAGTTCAACGATTTCTACGTGGATAAAGAAGAAGACTTCATTATCCGTTTCCAGGTTTCGTTTTTTTTTTCTTTTCTATTTTAAAAAAATAAAATAAAAATCTTCGCTTTGCCTGTTTGTAATTCTGAAATTTAAATTTTTGTTTACAGATTCCCGTTAAAAAATTCAATTTTTGTTTTGGTGTGAAGAGACTGCGTAATTGTTACGCTTGATTGGTTTGATTAATTTAAAACTTGAACAGAATTTTACAGTTGATAAGCTCAGCTTACAATTTTCTTCATTTCAATCACTTGGATAATTACACCTTGATTCTGGATTAGTTGTGGTCAACTTGCATGAATCCGTTATATCCATTGCGCTTTGTTGAAGTCCTAAAAACCAAAATTTCATCAGAATTTTTACTTAATGATTTGCATAAATTGGATCAAGTTGTTAGCTTTTGATGGATCTGGGAATGTGAAGGTTTTAAGGAATATGTTTCTGGTGTTTACGTGTTGTATTATTTGTAGCTTATTGTCGTAGAGAGGGATAAATGTACTGCCACTTCTGTGAGCGGCAATTAGTACGTGGTGAGCGGTGAGATAAAGGATGGAGGAATTGAAGAATATATATTTTTAGATATTCAAGAGTACTAGGATTTGTTTAAGTGACAAAGTCTCTCTTTTTGATGGATATGCTGCTGTAACATTTGATGTGTAAACGGAGAAGTAAATCACTATATGAATCACAACAAAGGCCAAAAAATGTAAATGCAACTATGACGAACTTAAGAGCAATGCCAATAAATGATGGTCCCTTGTGGACTTCAGATGGATGGTTCAAGTGATTGAGAGGAGATATATATACACGACATACCCCAAAAATAGAAGCAAATAGTTGGGTGCTGGTGGAGGGAAATAGTATGACATGAGCTTCCTGGAGAATATTCTTAGTAAAGCTGGGGATATAGAAGTATCTTAATGGCATATTCCCCCTACTGCCTTTATAATTTGTTGAGCTGATTTGACCAAGGAAATGCCAAACACTAAACATCAGAATATCTCTGGCTTTATCATATAACACTAACACCCGACCGAACAGATTACAACGACATACCTAGTGTAATCCCACAAGTCAGGTCTAGGAAGGGTAAGGCGTATGCAAACCTTACTACATTGGGAGGTAGAAAGGTTGTTTTCTATTGGCCCTCGGCTCAAGCAAAAAGCATCTCAAAGTAGTTTGAAAAAGAAATAACGGAAGTAAAGAAATTATGGAGAAATAGTATAGAGAGCATGTCAAAATATTCTGAAAAAGAACAATAACTTCAACAAATTAGTGCGATAATCGAATACAAGAGACCACAAATAGTGACAGAAATCAAAGGACAAAAACTACAAGAGAAGTACTACTACTACTAGTATGGAAGGATAAATAAGACAACACTCTACTATCTTTCTACCACGATCCTTGTCCTCTACAACCTCCTATCTAAGGTTATGTCCTTGGTAAGCAGCTACTTGTTCTAGTAAATTCTCCAGAAAAATATTTGTACTCTTAAATGTTCACCCTTTCTTCAAGTCCAATGAAGAAAATTTTCTATTAGGCAACTCGGAGTTAGGGTGCTTGACTAAACTGTTAGATCAACCACCTATGATCCTCCACACAACATGGAAACTAGGCTTGGGTTGCCTAAACAAGCAGGACACTTTGTGAGCTTATCATTTTCTAGTTTCTTTGAAGCTTTGTTGCATCATTGTTACTCAGCGTGGAGACTAGTTGGGATTGTTTGTCTTCTTGTCCTGCTACTTTTGATGAAGGCTGCCTAACCAATAAATATCAAAATTTTCTTGATCAAGTGTTAATAACTATCTAATTAGTTCTTTGCCTAATAAAAATAAAACTATCAGTCAAATTAGTTTTAGGATATTTGACCACACTTATCGGCGTTGTTGCTGATGTGGCCCCAAGTACTAGATTAAATAAGAAAGACATTCATATATTGAATATTATAAGAGAAATAGTTTATTGACTTTTGTATGACTTCGATAGCGTGGAACTGGCATAGTCTGTGTTGTACAGCTTTCTTCTTGTCTTGTTCAGACAAAAAAGTAATGTATATAATTATTTAAATAACATCTCCATTAATAAATTTCACGATATTTAACGCAATCAGAGAATAAACATAAACCTAAATTCAAATTGTTACTGTATGAAACACCTCATTTTGTACTTACCATGTGAAAAAATTAAATCTCACACCCACTAATAAAACTAAACATTCAGTAGAAACAATTGATTCTCTCTGTTAAATACCACTTTATTCTTTAGATTGCCTTATAGTCAATGCTTCCCAGTCTGTTGCATATATTTTTACTCTCATTTAACTAAAAAGTGAAAAAAGTTCCATAATACTAACCTCTTGTACTTGCCCATATTACTTATATGGGGGTGACTCACTTCACTTCTGCCGTTTCCAAAGCTGGTCTCGATCCTCAAAACCCGGCAGTCAACCCCTCCCTTGGCCGGTTCATGAGGTGTACTAGTAGTTAGGGAATTGCATGCATACTGAATACGTCATTTGGTTAATCATAAACTGGGACCAAGTTTCTTTTGAAAATGATTGGATCCAATGATGACCTTGGTCTTTAACTTTTCTTCATCTGGATCAGAATATGATACATTTCAGAACAAATGGGGTGGGTTCGTAACTCTTTTATCTGGTACCTGTGTCCGTGAGGGCTTTGGATGGAGCATGTCATCCGCCTTAGTCCAGGATTAGGATTGGTAGTTGGTGAAAGGAGTTATTATATGATATCTGGTGTCAGAAGTAACCAAATGCCTTTAACATATATATAACACATATAAGGTTCACTGTTACACTCCATAATATATAATTATGCAGGATTTCTTTGTCCCATCAGCCTTTACTACATAAGGCATCATGAGTAAATTGTAGCATAAAGACTCGAATATGGCAATCATTCTAGAGAACTTTGTTACTGAAAAGTGCAAACTGAAGTTGTCAAGTTTTAGTATGAAGCCCTTATAATTGCATATTCAATCTGCAACTGTCCTATTCAGGCCTGAATATACATTTACAATCGAATTTTGACTTCACATTCAATGACATGAAAGTAATATTGTCGTCATCATGCCTGGTTCGTGACCAAGTTCATCAATTACAAACATTACGTAGTTTGGCACTGGAATGTGGAGTCAAGTAACTATCAAAATGTTTACTTTTTGGGTAATCCATAATGAAATGAGATATGGCAGTGGAAGGATTCCAGGAAAGCTGCGGGTGTGTTAATGATGGACGTGACTGGTGAATTTGAAATTTAGATTGAAGTAGGAAGGTAAGACAGGGGTGGCGGAGCTACAGTTTTGTTGGCCAACTAAACAACAATTGTGGCTGGTGCACAGTGGAGACAGCATGGTAAATGCTTTCTCTGGTATGGGGTTCTGTGATTCTTGAAGGTCTGCGGTCGAGTGAGTTATTTGGTTGTAGAGGATGAAAATGTAATTTGTAGTGGGCCTGGTGGCCGCTTCAAAAGTTGTGGAGGCAGACAGTGGAACAGGATGCATTTTTCAGTTTGGAACTTATGGGCGCATTTTCTGAATTTTTGACTCATATTCCAATATGTGATTTTAGAAGGGCACTGAAAATGGACAGTGTTATCTTTTTCCGTATCTTAATGGAGGGGTAGACATTGGAAGGATGCAAGAATGAGTGTGTAAGATATCAACGTAGAAACAGAATGAGAGTCATCGTATTGCAGTATTATATTCTTAAAGATATTTGTAATACATAGCGAGTCTCAAATTGCTAGTGTGGATTTTGATTTTTTTTCTCTACTTGTATAACAGGAACTGAAGGAAAGAATTGAACGTGTGAAGGAGAAGAGCGACAAAGATGGAGTTCTTGCAACAAACAATGAATTCAGTGAAGAAATGATGAACATCCGTAAAGACTTTGTTTCCATACACGGGGAGATGGTTCTTATTAAAAATTATAGCTCATTAAATTTGGCAGGTATAGAGTTTTTCGGTCAATGTTCACTGGGCACTTCGGAAATGTGTTACCCGTGATAGTTATGTGTTTACAGCATCATAGTGTTCTAAGGATTAGAGGATCTCTTCCCTCTCTCTCCCTACATCCATCACGTGCTATTCCTCCTCAAAGTCTTCCCTCTTTCATACTCTTCTTCTTCCACCTAGTCCGCCCAACACCATCCTTTTCCCAATCTGCACGTGTCTTAGACTCTTACCACTTTCTCCACTGTTATTGGTTCCTTATTCCCTATGTGACTCTTACAAGCAACTCATCAAACTACATAAACTGAGGTAAAGATGCAGCTAGAAGATAGAGAAACAGAATGCTACTCCAAAACAATTTTGACTATTACAAATTTAATCCAAGTATTTGGATGCTGTCTTTCTCTTCACTTAACCCCACATTTTCATGATGTTCCGAAAAGGTCCTAAAATACCCTTATACTATTGAATTTGGTACAAAAAAACCCTTCGTTAATGTTTTGGCTCCAAAATACCCCTGACGTCAACATATTGGCTCTAAACTACCCTTATTTTTAAAGGTCCATTTCAAAAATAAAATTAAGAAATTCATTTATTACATGGCACGTTTCTATTGGCTATTTCCAAAATTAACCTAATTGATTAATCTCAAATCAGAATGCAGATCCACCCAATAACCCATATCCGCCCCGCCTAAAAGCCTCTTTAAATCAACAAATTAGCTTTTTTAAGTTGATTACTTTCTATTGAAAATTTCAAATTATTGGGAAAAAAAGCTTCTCAAGAATTTAAAGATAATCAAAACAACAGGGGTTTTTGAAGCAAGAAAGAGTTCTATGTACTGATGCATCAGATGGGTTATTCATAGTTCACCACTAAAATCAATTTCTCAATTTCACGCTCACTCTTCATGTAACTCCAATCCAAGTTCATGAAGATCACAAGGAGAATGTTCAGAGAACTCAAGAAGCTGACATCATTGATATTTTTTAGTCAATGAAGGAGCTTGAAGTTTAAGAATGGAGATCGAAGATAAAATCGAATGATAGACAGAACATAAGACCTGTTGCAAAGATAAAAATGTATGAACTTTTAGAGAAAAATTTCAGCCAAAGAATAAGACGTCTGATGAAAATTTTACCCATATATTTGACAAAATTTAGACGCTAGATTTGGATTTGAAAAGTTACCCTTTTTGACCCAAAATCTTATTGTTGCATTTCAAGAAGCAGACTTGATTGTTAAAACTCAGGTACAGAGAAAAGCCAAGATTGAAGAGAAGATTTTTAGAACCACTAGGAAAAATGAAGAAGATGAAGATAGGGAACCTCATTTAGACGGAGGCGGATATAGGTTATGGGTAGATCCGGATAATGATTTGAGATTAATTAAATAGGTTAATTTAAATAATAGCCAATAGGAATGCGGCACACAATAAATGAATTTATTAATTTTATTTTTGAAGTGGACCGTTAAAAATAAGGGTAATTTAGAGTCAATACTTTGACGTCAGGGGCATTTGGAGCCAAAAGGTTAACGAAGGGTATTTTTGTACCAAATTCGATAGTTTAAGGGTATTTTAGGTCATTTTCCGCATGCGGTTTAATGTTTAACACATTTCCTCCATCTCTGAGTTTCTGTTTTCCCCAATGTCCTTTTCCATTTTCTGATGATGATTCGTTCTTCCTTAATTCTCTTCCTCTACTTCTAATTCCTTCTACCAGTTCACTTTTTCTTTCTGATTTTATACTTTGAGGGGACAACAGATGATCAGTATTAAAGAGAGGAATATGGGTGACGTAAAATTATGGGAGCTAATAGCTCTACTCGGCAAACACAGACAACTCTCACATAACTAGCCATAGTTTAACACGAAAGTAAGATTTCTTGCTTTGGAGGTATAACTACCTCTGATTTCTGCAAGGTCAAGATATCTTCTCTAACAATTTTTTGTTTCATTAGGACTTGTTAAGATATTGAAGAAGTATGACAAACGAACTGGGGGATTGTTGCGTCTTCCTTTTACACAAGTCGCACTTCATCAGCCGATCTTTACTACGGAACCTCTGACGAGATTAGTCCATGAGTGTGAGGCTAATCTTGAGGTCCTATTTCCTTTGGAAGCAGAAGTTGTTGAATCAGCTGTCCCTGC</genome_strand>
        <mrna_strand>CGGCTGGTGGGTGAGGGAATTGCATATCCTAAACTCAAAATTGCTAATTCTTTGTGAGAATCTAACATTTTTGTAAAATTTTGAACTATATGTTATTGGATTTCAAGAACTCCAAAAAAAAGCAAAATTCTGTTTAAAAATCAATGTGTTTAAACAAATTTGTATAAAATCAAGCGATTGCCGGTGATATGAAATTCGGGAAAGAATTCAGCATCCATTTGGAAGAAACCCTACCTGAATGGAGGGATAAATACTTGTGTTACAAGCCGTTGAAGAAGCTTATCAAGCACATCCCTTCTTCCACCGCCGATAATACACCTCCGTTACCGCCGCTGCCGCCGGCGACGGCAGCCGCGACGGAGCTACAGGATTGGTTTATCAGAATTCTCAATGAGGAACTCGACAAGTTCAACGATTTCTACGTGGATAAAGAAGAAGACTTCATTATCCGTTTCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTGAAGGAAAGAATTGAACGTGTGAAGGATAAGAGCGACAAAGATGGAGTTCTTGCAACAAACAATGAATTCAGTGAAGAAATGATGAACATCCGTAAAGACTTTGTTTCCATACACGGGGAGATGGTTCTTCTGAAAAATTATAGCTCATTAAATTTTGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGTTAAGATATTGAAGAAGTATGACAAACGAACTGGGGGATTGTTGCGTCTTCCTTTTACACAAGTCGCACTTCATCAGCCGATCTTTACTACGGAACCTCTGACGAGATTAGTCCATGAGTGTGAGGCTAATCTTGAGGTCCTATTTCCTTTGCAAGCAGAAGTTGTTGAATCAGCTGTCCCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E729697" ref_strand="+" ref_description="SGN-E729697 [LA21DC11]">
      <seq>caattgcatatcctaaactcaaaattgctaattctttgtgagaatctaacatttttgtaaaattttgaactatatgttattggatttcaagaactccaaaaaaaagcaaaattctgtttaaaaatcagtgtgtttagacgaatttgtataaaatcaagcgattgccggtgatatgaaattcgggaaagaattcagcatccatttggaagaaaccctacctgaatggagggataaatacttgtgttacaagccgttgaagaagcttatcaagcacatcccttcttccaccgccgataatacacctccgttaccgccgctgccgccggcgacggcagccgcgacggagctacaggattggtttatcagaattctcaatgaggaactcgacaagttcaacgatttctacgtggataaagaagaagacttcattatccgtttccaggaactgaaggaaagaattgaacgtgtgaaggagaagagcgacaaagatggagttcttgcaacaaacaatgaattcagtgaagaaatgatgaacatccgtaaagactttgtttccatacacggggagatggttcttctgaaaaattatagctcattaaattttgcaggacttgttaagatattgaagaagtatgacaaacgaactgggggattgttgcgtcttccttttacacaagtcgcacttcatcagccgatctttactacggaacctctgaagagattaatccatgagtgtgaggctaatcttgaggtcctattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="111315" stop="104201"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111016" g_stop="110575" g_length="442"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="442" r_length="442" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110574" i_stop="106783" i_length="3792">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106782" g_stop="106617" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="608" r_length="166" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106616" i_stop="104653" i_length="1964">
            <donor d_prob="0.019" d_score="0.94"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104652" g_stop="104501" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="609" r_stop="760" r_length="152" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E729697" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>760</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E729697" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111016" e_stop="110575"/>
          <exon e_start="106782" e_stop="106617"/>
          <exon e_start="104652" e_stop="104501"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTGCATATCCTAAACTCAAAATTGCTAATTCTTTGTGAGAATCTAACATTTTTGTAAAATTTTGAACTATATGTTATTGGATTTCAAGAACTCCAAAAAAAAGCAAAATTCTGTTTAAAAATCAGTGTGTTTAGACGAATTTGTATAAAATCAAGCGATTGCCGGTGATATGAAATTCGGGAAAGAATTCAGCATCCATTTGGAAGAAACCCTACCTGAATGGAGGGATAAATACTTGTGTTACAAGCCGTTGAAGAAGCTTATCAAGCACATCCCTTCTTCCACCGCCGATAATACACCTCCGTTACCGCCGCTGCCGCCGGCGACGGCAGCCGCGACGGAGCTACAGGATTGGTTTATCAGAATTCTCAATGAGGAACTCGACAAGTTCAACGATTTCTACGTGGATAAAGAAGAAGACTTCATTATCCGTTTCCAGGTTTCGTTTTTTTTTTCTTTTCTATTTTAAAAAAATAAAATAAAAATCTTCGCTTTGCCTGTTTGTAATTCTGAAATTTAAATTTTTGTTTACAGATTCCCGTTAAAAAATTCAATTTTTGTTTTGGTGTGAAGAGACTGCGTAATTGTTACGCTTGATTGGTTTGATTAATTTAAAACTTGAACAGAATTTTACAGTTGATAAGCTCAGCTTACAATTTTCTTCATTTCAATCACTTGGATAATTACACCTTGATTCTGGATTAGTTGTGGTCAACTTGCATGAATCCGTTATATCCATTGCGCTTTGTTGAAGTCCTAAAAACCAAAATTTCATCAGAATTTTTACTTAATGATTTGCATAAATTGGATCAAGTTGTTAGCTTTTGATGGATCTGGGAATGTGAAGGTTTTAAGGAATATGTTTCTGGTGTTTACGTGTTGTATTATTTGTAGCTTATTGTCGTAGAGAGGGATAAATGTACTGCCACTTCTGTGAGCGGCAATTAGTACGTGGTGAGCGGTGAGATAAAGGATGGAGGAATTGAAGAATATATATTTTTAGATATTCAAGAGTACTAGGATTTGTTTAAGTGACAAAGTCTCTCTTTTTGATGGATATGCTGCTGTAACATTTGATGTGTAAACGGAGAAGTAAATCACTATATGAATCACAACAAAGGCCAAAAAATGTAAATGCAACTATGACGAACTTAAGAGCAATGCCAATAAATGATGGTCCCTTGTGGACTTCAGATGGATGGTTCAAGTGATTGAGAGGAGATATATATACACGACATACCCCAAAAATAGAAGCAAATAGTTGGGTGCTGGTGGAGGGAAATAGTATGACATGAGCTTCCTGGAGAATATTCTTAGTAAAGCTGGGGATATAGAAGTATCTTAATGGCATATTCCCCCTACTGCCTTTATAATTTGTTGAGCTGATTTGACCAAGGAAATGCCAAACACTAAACATCAGAATATCTCTGGCTTTATCATATAACACTAACACCCGACCGAACAGATTACAACGACATACCTAGTGTAATCCCACAAGTCAGGTCTAGGAAGGGTAAGGCGTATGCAAACCTTACTACATTGGGAGGTAGAAAGGTTGTTTTCTATTGGCCCTCGGCTCAAGCAAAAAGCATCTCAAAGTAGTTTGAAAAAGAAATAACGGAAGTAAAGAAATTATGGAGAAATAGTATAGAGAGCATGTCAAAATATTCTGAAAAAGAACAATAACTTCAACAAATTAGTGCGATAATCGAATACAAGAGACCACAAATAGTGACAGAAATCAAAGGACAAAAACTACAAGAGAAGTACTACTACTACTAGTATGGAAGGATAAATAAGACAACACTCTACTATCTTTCTACCACGATCCTTGTCCTCTACAACCTCCTATCTAAGGTTATGTCCTTGGTAAGCAGCTACTTGTTCTAGTAAATTCTCCAGAAAAATATTTGTACTCTTAAATGTTCACCCTTTCTTCAAGTCCAATGAAGAAAATTTTCTATTAGGCAACTCGGAGTTAGGGTGCTTGACTAAACTGTTAGATCAACCACCTATGATCCTCCACACAACATGGAAACTAGGCTTGGGTTGCCTAAACAAGCAGGACACTTTGTGAGCTTATCATTTTCTAGTTTCTTTGAAGCTTTGTTGCATCATTGTTACTCAGCGTGGAGACTAGTTGGGATTGTTTGTCTTCTTGTCCTGCTACTTTTGATGAAGGCTGCCTAACCAATAAATATCAAAATTTTCTTGATCAAGTGTTAATAACTATCTAATTAGTTCTTTGCCTAATAAAAATAAAACTATCAGTCAAATTAGTTTTAGGATATTTGACCACACTTATCGGCGTTGTTGCTGATGTGGCCCCAAGTACTAGATTAAATAAGAAAGACATTCATATATTGAATATTATAAGAGAAATAGTTTATTGACTTTTGTATGACTTCGATAGCGTGGAACTGGCATAGTCTGTGTTGTACAGCTTTCTTCTTGTCTTGTTCAGACAAAAAAGTAATGTATATAATTATTTAAATAACATCTCCATTAATAAATTTCACGATATTTAACGCAATCAGAGAATAAACATAAACCTAAATTCAAATTGTTACTGTATGAAACACCTCATTTTGTACTTACCATGTGAAAAAATTAAATCTCACACCCACTAATAAAACTAAACATTCAGTAGAAACAATTGATTCTCTCTGTTAAATACCACTTTATTCTTTAGATTGCCTTATAGTCAATGCTTCCCAGTCTGTTGCATATATTTTTACTCTCATTTAACTAAAAAGTGAAAAAAGTTCCATAATACTAACCTCTTGTACTTGCCCATATTACTTATATGGGGGTGACTCACTTCACTTCTGCCGTTTCCAAAGCTGGTCTCGATCCTCAAAACCCGGCAGTCAACCCCTCCCTTGGCCGGTTCATGAGGTGTACTAGTAGTTAGGGAATTGCATGCATACTGAATACGTCATTTGGTTAATCATAAACTGGGACCAAGTTTCTTTTGAAAATGATTGGATCCAATGATGACCTTGGTCTTTAACTTTTCTTCATCTGGATCAGAATATGATACATTTCAGAACAAATGGGGTGGGTTCGTAACTCTTTTATCTGGTACCTGTGTCCGTGAGGGCTTTGGATGGAGCATGTCATCCGCCTTAGTCCAGGATTAGGATTGGTAGTTGGTGAAAGGAGTTATTATATGATATCTGGTGTCAGAAGTAACCAAATGCCTTTAACATATATATAACACATATAAGGTTCACTGTTACACTCCATAATATATAATTATGCAGGATTTCTTTGTCCCATCAGCCTTTACTACATAAGGCATCATGAGTAAATTGTAGCATAAAGACTCGAATATGGCAATCATTCTAGAGAACTTTGTTACTGAAAAGTGCAAACTGAAGTTGTCAAGTTTTAGTATGAAGCCCTTATAATTGCATATTCAATCTGCAACTGTCCTATTCAGGCCTGAATATACATTTACAATCGAATTTTGACTTCACATTCAATGACATGAAAGTAATATTGTCGTCATCATGCCTGGTTCGTGACCAAGTTCATCAATTACAAACATTACGTAGTTTGGCACTGGAATGTGGAGTCAAGTAACTATCAAAATGTTTACTTTTTGGGTAATCCATAATGAAATGAGATATGGCAGTGGAAGGATTCCAGGAAAGCTGCGGGTGTGTTAATGATGGACGTGACTGGTGAATTTGAAATTTAGATTGAAGTAGGAAGGTAAGACAGGGGTGGCGGAGCTACAGTTTTGTTGGCCAACTAAACAACAATTGTGGCTGGTGCACAGTGGAGACAGCATGGTAAATGCTTTCTCTGGTATGGGGTTCTGTGATTCTTGAAGGTCTGCGGTCGAGTGAGTTATTTGGTTGTAGAGGATGAAAATGTAATTTGTAGTGGGCCTGGTGGCCGCTTCAAAAGTTGTGGAGGCAGACAGTGGAACAGGATGCATTTTTCAGTTTGGAACTTATGGGCGCATTTTCTGAATTTTTGACTCATATTCCAATATGTGATTTTAGAAGGGCACTGAAAATGGACAGTGTTATCTTTTTCCGTATCTTAATGGAGGGGTAGACATTGGAAGGATGCAAGAATGAGTGTGTAAGATATCAACGTAGAAACAGAATGAGAGTCATCGTATTGCAGTATTATATTCTTAAAGATATTTGTAATACATAGCGAGTCTCAAATTGCTAGTGTGGATTTTGATTTTTTTTCTCTACTTGTATAACAGGAACTGAAGGAAAGAATTGAACGTGTGAAGGAGAAGAGCGACAAAGATGGAGTTCTTGCAACAAACAATGAATTCAGTGAAGAAATGATGAACATCCGTAAAGACTTTGTTTCCATACACGGGGAGATGGTTCTTATTAAAAATTATAGCTCATTAAATTTGGCAGGTATAGAGTTTTTCGGTCAATGTTCACTGGGCACTTCGGAAATGTGTTACCCGTGATAGTTATGTGTTTACAGCATCATAGTGTTCTAAGGATTAGAGGATCTCTTCCCTCTCTCTCCCTACATCCATCACGTGCTATTCCTCCTCAAAGTCTTCCCTCTTTCATACTCTTCTTCTTCCACCTAGTCCGCCCAACACCATCCTTTTCCCAATCTGCACGTGTCTTAGACTCTTACCACTTTCTCCACTGTTATTGGTTCCTTATTCCCTATGTGACTCTTACAAGCAACTCATCAAACTACATAAACTGAGGTAAAGATGCAGCTAGAAGATAGAGAAACAGAATGCTACTCCAAAACAATTTTGACTATTACAAATTTAATCCAAGTATTTGGATGCTGTCTTTCTCTTCACTTAACCCCACATTTTCATGATGTTCCGAAAAGGTCCTAAAATACCCTTATACTATTGAATTTGGTACAAAAAAACCCTTCGTTAATGTTTTGGCTCCAAAATACCCCTGACGTCAACATATTGGCTCTAAACTACCCTTATTTTTAAAGGTCCATTTCAAAAATAAAATTAAGAAATTCATTTATTACATGGCACGTTTCTATTGGCTATTTCCAAAATTAACCTAATTGATTAATCTCAAATCAGAATGCAGATCCACCCAATAACCCATATCCGCCCCGCCTAAAAGCCTCTTTAAATCAACAAATTAGCTTTTTTAAGTTGATTACTTTCTATTGAAAATTTCAAATTATTGGGAAAAAAAGCTTCTCAAGAATTTAAAGATAATCAAAACAACAGGGGTTTTTGAAGCAAGAAAGAGTTCTATGTACTGATGCATCAGATGGGTTATTCATAGTTCACCACTAAAATCAATTTCTCAATTTCACGCTCACTCTTCATGTAACTCCAATCCAAGTTCATGAAGATCACAAGGAGAATGTTCAGAGAACTCAAGAAGCTGACATCATTGATATTTTTTAGTCAATGAAGGAGCTTGAAGTTTAAGAATGGAGATCGAAGATAAAATCGAATGATAGACAGAACATAAGACCTGTTGCAAAGATAAAAATGTATGAACTTTTAGAGAAAAATTTCAGCCAAAGAATAAGACGTCTGATGAAAATTTTACCCATATATTTGACAAAATTTAGACGCTAGATTTGGATTTGAAAAGTTACCCTTTTTGACCCAAAATCTTATTGTTGCATTTCAAGAAGCAGACTTGATTGTTAAAACTCAGGTACAGAGAAAAGCCAAGATTGAAGAGAAGATTTTTAGAACCACTAGGAAAAATGAAGAAGATGAAGATAGGGAACCTCATTTAGACGGAGGCGGATATAGGTTATGGGTAGATCCGGATAATGATTTGAGATTAATTAAATAGGTTAATTTAAATAATAGCCAATAGGAATGCGGCACACAATAAATGAATTTATTAATTTTATTTTTGAAGTGGACCGTTAAAAATAAGGGTAATTTAGAGTCAATACTTTGACGTCAGGGGCATTTGGAGCCAAAAGGTTAACGAAGGGTATTTTTGTACCAAATTCGATAGTTTAAGGGTATTTTAGGTCATTTTCCGCATGCGGTTTAATGTTTAACACATTTCCTCCATCTCTGAGTTTCTGTTTTCCCCAATGTCCTTTTCCATTTTCTGATGATGATTCGTTCTTCCTTAATTCTCTTCCTCTACTTCTAATTCCTTCTACCAGTTCACTTTTTCTTTCTGATTTTATACTTTGAGGGGACAACAGATGATCAGTATTAAAGAGAGGAATATGGGTGACGTAAAATTATGGGAGCTAATAGCTCTACTCGGCAAACACAGACAACTCTCACATAACTAGCCATAGTTTAACACGAAAGTAAGATTTCTTGCTTTGGAGGTATAACTACCTCTGATTTCTGCAAGGTCAAGATATCTTCTCTAACAATTTTTTGTTTCATTAGGACTTGTTAAGATATTGAAGAAGTATGACAAACGAACTGGGGGATTGTTGCGTCTTCCTTTTACACAAGTCGCACTTCATCAGCCGATCTTTACTACGGAACCTCTGACGAGATTAGTCCATGAGTGTGAGGCTAATCTTGAGGTCCTATTT</genome_strand>
        <mrna_strand>CAATTGCATATCCTAAACTCAAAATTGCTAATTCTTTGTGAGAATCTAACATTTTTGTAAAATTTTGAACTATATGTTATTGGATTTCAAGAACTCCAAAAAAAAGCAAAATTCTGTTTAAAAATCAGTGTGTTTAGACGAATTTGTATAAAATCAAGCGATTGCCGGTGATATGAAATTCGGGAAAGAATTCAGCATCCATTTGGAAGAAACCCTACCTGAATGGAGGGATAAATACTTGTGTTACAAGCCGTTGAAGAAGCTTATCAAGCACATCCCTTCTTCCACCGCCGATAATACACCTCCGTTACCGCCGCTGCCGCCGGCGACGGCAGCCGCGACGGAGCTACAGGATTGGTTTATCAGAATTCTCAATGAGGAACTCGACAAGTTCAACGATTTCTACGTGGATAAAGAAGAAGACTTCATTATCCGTTTCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTGAAGGAAAGAATTGAACGTGTGAAGGAGAAGAGCGACAAAGATGGAGTTCTTGCAACAAACAATGAATTCAGTGAAGAAATGATGAACATCCGTAAAGACTTTGTTTCCATACACGGGGAGATGGTTCTTCTGAAAAATTATAGCTCATTAAATTTTGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGTTAAGATATTGAAGAAGTATGACAAACGAACTGGGGGATTGTTGCGTCTTCCTTTTACACAAGTCGCACTTCATCAGCCGATCTTTACTACGGAACCTCTGAAGAGATTAATCCATGAGTGTGAGGCTAATCTTGAGGTCCTATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E729890" ref_strand="+" ref_description="SGN-E729890 [LA22BF09]">
      <seq>ggtaattgcatatcctaaactcaaaattgctaattctttgtgagaatctaacatttttgtaaaattttgaactatatgttattggatttcaagaactccaaaaaaaagcaaaattctgtttaaaaatcattgtgtttagacgaatttgtataaaatcaagcgattgccggtgatatgaaattcgggaaagaattcctcatccatttggaagaaaccctacctgaatggagggataaatacttgtgttacaagccgttgaaaaaacttatcaagcacatcccttcttccaccgcctataatacacctccgttaccgccgctgccgccggcgacggcagccgcaacggagctacaggattggtttatcaaaattctcaatgaggaactcgacaagttcaacgatttctacgtggataaagaagaacacttcattatccgtttccaggaactgaaggaaagaattgaacgtgtgaaggagaagagcgacaaagatggagttcttgcaacaaacaatgaattcattgaagaaatgatgaacatccgtaaagactttgtttccatacacggagagatggttcttctgaagaattatagctcattaaattttgcaggacttgttaagatattgaagaagtatgacacacgaactgggggattgttgcgtcttccttttacacaagtcacacttcatcagccgatctttactacggaacctctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="111318" stop="104245"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111018" g_stop="110575" g_length="444"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="444" r_length="444" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110574" i_stop="106783" i_length="3792">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106782" g_stop="106617" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="610" r_length="166" r_score="0.964"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106616" i_stop="104653" i_length="1964">
            <donor d_prob="0.019" d_score="0.90"/>
            <acceptor a_prob="0.952" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104652" g_stop="104545" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="611" r_stop="718" r_length="108" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E729890" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>718</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E729890" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111018" e_stop="110575"/>
          <exon e_start="106782" e_stop="106617"/>
          <exon e_start="104652" e_stop="104545"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAATTGCATATCCTAAACTCAAAATTGCTAATTCTTTGTGAGAATCTAACATTTTTGTAAAATTTTGAACTATATGTTATTGGATTTCAAGAACTCCAAAAAAAAGCAAAATTCTGTTTAAAAATCAGTGTGTTTAGACGAATTTGTATAAAATCAAGCGATTGCCGGTGATATGAAATTCGGGAAAGAATTCAGCATCCATTTGGAAGAAACCCTACCTGAATGGAGGGATAAATACTTGTGTTACAAGCCGTTGAAGAAGCTTATCAAGCACATCCCTTCTTCCACCGCCGATAATACACCTCCGTTACCGCCGCTGCCGCCGGCGACGGCAGCCGCGACGGAGCTACAGGATTGGTTTATCAGAATTCTCAATGAGGAACTCGACAAGTTCAACGATTTCTACGTGGATAAAGAAGAAGACTTCATTATCCGTTTCCAGGTTTCGTTTTTTTTTTCTTTTCTATTTTAAAAAAATAAAATAAAAATCTTCGCTTTGCCTGTTTGTAATTCTGAAATTTAAATTTTTGTTTACAGATTCCCGTTAAAAAATTCAATTTTTGTTTTGGTGTGAAGAGACTGCGTAATTGTTACGCTTGATTGGTTTGATTAATTTAAAACTTGAACAGAATTTTACAGTTGATAAGCTCAGCTTACAATTTTCTTCATTTCAATCACTTGGATAATTACACCTTGATTCTGGATTAGTTGTGGTCAACTTGCATGAATCCGTTATATCCATTGCGCTTTGTTGAAGTCCTAAAAACCAAAATTTCATCAGAATTTTTACTTAATGATTTGCATAAATTGGATCAAGTTGTTAGCTTTTGATGGATCTGGGAATGTGAAGGTTTTAAGGAATATGTTTCTGGTGTTTACGTGTTGTATTATTTGTAGCTTATTGTCGTAGAGAGGGATAAATGTACTGCCACTTCTGTGAGCGGCAATTAGTACGTGGTGAGCGGTGAGATAAAGGATGGAGGAATTGAAGAATATATATTTTTAGATATTCAAGAGTACTAGGATTTGTTTAAGTGACAAAGTCTCTCTTTTTGATGGATATGCTGCTGTAACATTTGATGTGTAAACGGAGAAGTAAATCACTATATGAATCACAACAAAGGCCAAAAAATGTAAATGCAACTATGACGAACTTAAGAGCAATGCCAATAAATGATGGTCCCTTGTGGACTTCAGATGGATGGTTCAAGTGATTGAGAGGAGATATATATACACGACATACCCCAAAAATAGAAGCAAATAGTTGGGTGCTGGTGGAGGGAAATAGTATGACATGAGCTTCCTGGAGAATATTCTTAGTAAAGCTGGGGATATAGAAGTATCTTAATGGCATATTCCCCCTACTGCCTTTATAATTTGTTGAGCTGATTTGACCAAGGAAATGCCAAACACTAAACATCAGAATATCTCTGGCTTTATCATATAACACTAACACCCGACCGAACAGATTACAACGACATACCTAGTGTAATCCCACAAGTCAGGTCTAGGAAGGGTAAGGCGTATGCAAACCTTACTACATTGGGAGGTAGAAAGGTTGTTTTCTATTGGCCCTCGGCTCAAGCAAAAAGCATCTCAAAGTAGTTTGAAAAAGAAATAACGGAAGTAAAGAAATTATGGAGAAATAGTATAGAGAGCATGTCAAAATATTCTGAAAAAGAACAATAACTTCAACAAATTAGTGCGATAATCGAATACAAGAGACCACAAATAGTGACAGAAATCAAAGGACAAAAACTACAAGAGAAGTACTACTACTACTAGTATGGAAGGATAAATAAGACAACACTCTACTATCTTTCTACCACGATCCTTGTCCTCTACAACCTCCTATCTAAGGTTATGTCCTTGGTAAGCAGCTACTTGTTCTAGTAAATTCTCCAGAAAAATATTTGTACTCTTAAATGTTCACCCTTTCTTCAAGTCCAATGAAGAAAATTTTCTATTAGGCAACTCGGAGTTAGGGTGCTTGACTAAACTGTTAGATCAACCACCTATGATCCTCCACACAACATGGAAACTAGGCTTGGGTTGCCTAAACAAGCAGGACACTTTGTGAGCTTATCATTTTCTAGTTTCTTTGAAGCTTTGTTGCATCATTGTTACTCAGCGTGGAGACTAGTTGGGATTGTTTGTCTTCTTGTCCTGCTACTTTTGATGAAGGCTGCCTAACCAATAAATATCAAAATTTTCTTGATCAAGTGTTAATAACTATCTAATTAGTTCTTTGCCTAATAAAAATAAAACTATCAGTCAAATTAGTTTTAGGATATTTGACCACACTTATCGGCGTTGTTGCTGATGTGGCCCCAAGTACTAGATTAAATAAGAAAGACATTCATATATTGAATATTATAAGAGAAATAGTTTATTGACTTTTGTATGACTTCGATAGCGTGGAACTGGCATAGTCTGTGTTGTACAGCTTTCTTCTTGTCTTGTTCAGACAAAAAAGTAATGTATATAATTATTTAAATAACATCTCCATTAATAAATTTCACGATATTTAACGCAATCAGAGAATAAACATAAACCTAAATTCAAATTGTTACTGTATGAAACACCTCATTTTGTACTTACCATGTGAAAAAATTAAATCTCACACCCACTAATAAAACTAAACATTCAGTAGAAACAATTGATTCTCTCTGTTAAATACCACTTTATTCTTTAGATTGCCTTATAGTCAATGCTTCCCAGTCTGTTGCATATATTTTTACTCTCATTTAACTAAAAAGTGAAAAAAGTTCCATAATACTAACCTCTTGTACTTGCCCATATTACTTATATGGGGGTGACTCACTTCACTTCTGCCGTTTCCAAAGCTGGTCTCGATCCTCAAAACCCGGCAGTCAACCCCTCCCTTGGCCGGTTCATGAGGTGTACTAGTAGTTAGGGAATTGCATGCATACTGAATACGTCATTTGGTTAATCATAAACTGGGACCAAGTTTCTTTTGAAAATGATTGGATCCAATGATGACCTTGGTCTTTAACTTTTCTTCATCTGGATCAGAATATGATACATTTCAGAACAAATGGGGTGGGTTCGTAACTCTTTTATCTGGTACCTGTGTCCGTGAGGGCTTTGGATGGAGCATGTCATCCGCCTTAGTCCAGGATTAGGATTGGTAGTTGGTGAAAGGAGTTATTATATGATATCTGGTGTCAGAAGTAACCAAATGCCTTTAACATATATATAACACATATAAGGTTCACTGTTACACTCCATAATATATAATTATGCAGGATTTCTTTGTCCCATCAGCCTTTACTACATAAGGCATCATGAGTAAATTGTAGCATAAAGACTCGAATATGGCAATCATTCTAGAGAACTTTGTTACTGAAAAGTGCAAACTGAAGTTGTCAAGTTTTAGTATGAAGCCCTTATAATTGCATATTCAATCTGCAACTGTCCTATTCAGGCCTGAATATACATTTACAATCGAATTTTGACTTCACATTCAATGACATGAAAGTAATATTGTCGTCATCATGCCTGGTTCGTGACCAAGTTCATCAATTACAAACATTACGTAGTTTGGCACTGGAATGTGGAGTCAAGTAACTATCAAAATGTTTACTTTTTGGGTAATCCATAATGAAATGAGATATGGCAGTGGAAGGATTCCAGGAAAGCTGCGGGTGTGTTAATGATGGACGTGACTGGTGAATTTGAAATTTAGATTGAAGTAGGAAGGTAAGACAGGGGTGGCGGAGCTACAGTTTTGTTGGCCAACTAAACAACAATTGTGGCTGGTGCACAGTGGAGACAGCATGGTAAATGCTTTCTCTGGTATGGGGTTCTGTGATTCTTGAAGGTCTGCGGTCGAGTGAGTTATTTGGTTGTAGAGGATGAAAATGTAATTTGTAGTGGGCCTGGTGGCCGCTTCAAAAGTTGTGGAGGCAGACAGTGGAACAGGATGCATTTTTCAGTTTGGAACTTATGGGCGCATTTTCTGAATTTTTGACTCATATTCCAATATGTGATTTTAGAAGGGCACTGAAAATGGACAGTGTTATCTTTTTCCGTATCTTAATGGAGGGGTAGACATTGGAAGGATGCAAGAATGAGTGTGTAAGATATCAACGTAGAAACAGAATGAGAGTCATCGTATTGCAGTATTATATTCTTAAAGATATTTGTAATACATAGCGAGTCTCAAATTGCTAGTGTGGATTTTGATTTTTTTTCTCTACTTGTATAACAGGAACTGAAGGAAAGAATTGAACGTGTGAAGGAGAAGAGCGACAAAGATGGAGTTCTTGCAACAAACAATGAATTCAGTGAAGAAATGATGAACATCCGTAAAGACTTTGTTTCCATACACGGGGAGATGGTTCTTATTAAAAATTATAGCTCATTAAATTTGGCAGGTATAGAGTTTTTCGGTCAATGTTCACTGGGCACTTCGGAAATGTGTTACCCGTGATAGTTATGTGTTTACAGCATCATAGTGTTCTAAGGATTAGAGGATCTCTTCCCTCTCTCTCCCTACATCCATCACGTGCTATTCCTCCTCAAAGTCTTCCCTCTTTCATACTCTTCTTCTTCCACCTAGTCCGCCCAACACCATCCTTTTCCCAATCTGCACGTGTCTTAGACTCTTACCACTTTCTCCACTGTTATTGGTTCCTTATTCCCTATGTGACTCTTACAAGCAACTCATCAAACTACATAAACTGAGGTAAAGATGCAGCTAGAAGATAGAGAAACAGAATGCTACTCCAAAACAATTTTGACTATTACAAATTTAATCCAAGTATTTGGATGCTGTCTTTCTCTTCACTTAACCCCACATTTTCATGATGTTCCGAAAAGGTCCTAAAATACCCTTATACTATTGAATTTGGTACAAAAAAACCCTTCGTTAATGTTTTGGCTCCAAAATACCCCTGACGTCAACATATTGGCTCTAAACTACCCTTATTTTTAAAGGTCCATTTCAAAAATAAAATTAAGAAATTCATTTATTACATGGCACGTTTCTATTGGCTATTTCCAAAATTAACCTAATTGATTAATCTCAAATCAGAATGCAGATCCACCCAATAACCCATATCCGCCCCGCCTAAAAGCCTCTTTAAATCAACAAATTAGCTTTTTTAAGTTGATTACTTTCTATTGAAAATTTCAAATTATTGGGAAAAAAAGCTTCTCAAGAATTTAAAGATAATCAAAACAACAGGGGTTTTTGAAGCAAGAAAGAGTTCTATGTACTGATGCATCAGATGGGTTATTCATAGTTCACCACTAAAATCAATTTCTCAATTTCACGCTCACTCTTCATGTAACTCCAATCCAAGTTCATGAAGATCACAAGGAGAATGTTCAGAGAACTCAAGAAGCTGACATCATTGATATTTTTTAGTCAATGAAGGAGCTTGAAGTTTAAGAATGGAGATCGAAGATAAAATCGAATGATAGACAGAACATAAGACCTGTTGCAAAGATAAAAATGTATGAACTTTTAGAGAAAAATTTCAGCCAAAGAATAAGACGTCTGATGAAAATTTTACCCATATATTTGACAAAATTTAGACGCTAGATTTGGATTTGAAAAGTTACCCTTTTTGACCCAAAATCTTATTGTTGCATTTCAAGAAGCAGACTTGATTGTTAAAACTCAGGTACAGAGAAAAGCCAAGATTGAAGAGAAGATTTTTAGAACCACTAGGAAAAATGAAGAAGATGAAGATAGGGAACCTCATTTAGACGGAGGCGGATATAGGTTATGGGTAGATCCGGATAATGATTTGAGATTAATTAAATAGGTTAATTTAAATAATAGCCAATAGGAATGCGGCACACAATAAATGAATTTATTAATTTTATTTTTGAAGTGGACCGTTAAAAATAAGGGTAATTTAGAGTCAATACTTTGACGTCAGGGGCATTTGGAGCCAAAAGGTTAACGAAGGGTATTTTTGTACCAAATTCGATAGTTTAAGGGTATTTTAGGTCATTTTCCGCATGCGGTTTAATGTTTAACACATTTCCTCCATCTCTGAGTTTCTGTTTTCCCCAATGTCCTTTTCCATTTTCTGATGATGATTCGTTCTTCCTTAATTCTCTTCCTCTACTTCTAATTCCTTCTACCAGTTCACTTTTTCTTTCTGATTTTATACTTTGAGGGGACAACAGATGATCAGTATTAAAGAGAGGAATATGGGTGACGTAAAATTATGGGAGCTAATAGCTCTACTCGGCAAACACAGACAACTCTCACATAACTAGCCATAGTTTAACACGAAAGTAAGATTTCTTGCTTTGGAGGTATAACTACCTCTGATTTCTGCAAGGTCAAGATATCTTCTCTAACAATTTTTTGTTTCATTAGGACTTGTTAAGATATTGAAGAAGTATGACAAACGAACTGGGGGATTGTTGCGTCTTCCTTTTACACAAGTCGCACTTCATCAGCCGATCTTTACTACGGAACCTCTGA</genome_strand>
        <mrna_strand>GGTAATTGCATATCCTAAACTCAAAATTGCTAATTCTTTGTGAGAATCTAACATTTTTGTAAAATTTTGAACTATATGTTATTGGATTTCAAGAACTCCAAAAAAAAGCAAAATTCTGTTTAAAAATCATTGTGTTTAGACGAATTTGTATAAAATCAAGCGATTGCCGGTGATATGAAATTCGGGAAAGAATTCCTCATCCATTTGGAAGAAACCCTACCTGAATGGAGGGATAAATACTTGTGTTACAAGCCGTTGAAAAAACTTATCAAGCACATCCCTTCTTCCACCGCCTATAATACACCTCCGTTACCGCCGCTGCCGCCGGCGACGGCAGCCGCAACGGAGCTACAGGATTGGTTTATCAAAATTCTCAATGAGGAACTCGACAAGTTCAACGATTTCTACGTGGATAAAGAAGAACACTTCATTATCCGTTTCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTGAAGGAAAGAATTGAACGTGTGAAGGAGAAGAGCGACAAAGATGGAGTTCTTGCAACAAACAATGAATTCATTGAAGAAATGATGAACATCCGTAAAGACTTTGTTTCCATACACGGAGAGATGGTTCTTCTGAAGAATTATAGCTCATTAAATTTTGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGTTAAGATATTGAAGAAGTATGACACACGAACTGGGGGATTGTTGCGTCTTCCTTTTACACAAGTCACACTTCATCAGCCGATCTTTACTACGGAACCTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E302502" ref_strand="+" ref_description="SGN-E302502 [cLEX-1-A9]">
      <seq>ctaatttgagttcctttggttggtgggtgagggaattgcatatcctaaactcaaaattgctaattctttgtgagaatctaacatttttgtaaaattttgaactatatgttattggatttcaagaactccaaaaaaaagcaaaattctgtttaaaaatcagtgtgtttagacgaatttgtataaaatcaagcgattgccggtgatatgaaattcgggaaagaattcagcatccatttggaagaaaccctacctgaatggagggataaatacttgtgttacaagccgttgaagaagcttatcaagcacatcccttcttncanngtcgataatacacctccgttaccgccgctgccgccggcgacggcagccgcgacggagctacaggattggtttatcagaattctcaatgaggaactcgacaagttcaacgatttctacgtggataaagaagaagacttcattatccgtttccaggaactgaaggaaagaattgaacgtgtgaaggagaagagcgacaaagatggagttcttgcaacaaacaatgaattcagtgaagaaatgatgaacatccgtaaagactttgtttccatacacggngagatggttcttctgaaaaattatagctcattaaattttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="111348" stop="106322"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111048" g_stop="110575" g_length="474"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="474" r_length="474" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110574" i_stop="106783" i_length="3792">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106782" g_stop="106620" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="637" r_length="163" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E302502" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>637</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E302502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111048" e_stop="110575"/>
          <exon e_start="106782" e_stop="106620"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAATTTGAGTTCCTTTGGTTGGTGGGTGAGGGAATTGCATATCCTAAACTCAAAATTGCTAATTCTTTGTGAGAATCTAACATTTTTGTAAAATTTTGAACTATATGTTATTGGATTTCAAGAACTCCAAAAAAAAGCAAAATTCTGTTTAAAAATCAGTGTGTTTAGACGAATTTGTATAAAATCAAGCGATTGCCGGTGATATGAAATTCGGGAAAGAATTCAGCATCCATTTGGAAGAAACCCTACCTGAATGGAGGGATAAATACTTGTGTTACAAGCCGTTGAAGAAGCTTATCAAGCACATCCCTTCTTCCACCGCCGATAATACACCTCCGTTACCGCCGCTGCCGCCGGCGACGGCAGCCGCGACGGAGCTACAGGATTGGTTTATCAGAATTCTCAATGAGGAACTCGACAAGTTCAACGATTTCTACGTGGATAAAGAAGAAGACTTCATTATCCGTTTCCAGGTTTCGTTTTTTTTTTCTTTTCTATTTTAAAAAAATAAAATAAAAATCTTCGCTTTGCCTGTTTGTAATTCTGAAATTTAAATTTTTGTTTACAGATTCCCGTTAAAAAATTCAATTTTTGTTTTGGTGTGAAGAGACTGCGTAATTGTTACGCTTGATTGGTTTGATTAATTTAAAACTTGAACAGAATTTTACAGTTGATAAGCTCAGCTTACAATTTTCTTCATTTCAATCACTTGGATAATTACACCTTGATTCTGGATTAGTTGTGGTCAACTTGCATGAATCCGTTATATCCATTGCGCTTTGTTGAAGTCCTAAAAACCAAAATTTCATCAGAATTTTTACTTAATGATTTGCATAAATTGGATCAAGTTGTTAGCTTTTGATGGATCTGGGAATGTGAAGGTTTTAAGGAATATGTTTCTGGTGTTTACGTGTTGTATTATTTGTAGCTTATTGTCGTAGAGAGGGATAAATGTACTGCCACTTCTGTGAGCGGCAATTAGTACGTGGTGAGCGGTGAGATAAAGGATGGAGGAATTGAAGAATATATATTTTTAGATATTCAAGAGTACTAGGATTTGTTTAAGTGACAAAGTCTCTCTTTTTGATGGATATGCTGCTGTAACATTTGATGTGTAAACGGAGAAGTAAATCACTATATGAATCACAACAAAGGCCAAAAAATGTAAATGCAACTATGACGAACTTAAGAGCAATGCCAATAAATGATGGTCCCTTGTGGACTTCAGATGGATGGTTCAAGTGATTGAGAGGAGATATATATACACGACATACCCCAAAAATAGAAGCAAATAGTTGGGTGCTGGTGGAGGGAAATAGTATGACATGAGCTTCCTGGAGAATATTCTTAGTAAAGCTGGGGATATAGAAGTATCTTAATGGCATATTCCCCCTACTGCCTTTATAATTTGTTGAGCTGATTTGACCAAGGAAATGCCAAACACTAAACATCAGAATATCTCTGGCTTTATCATATAACACTAACACCCGACCGAACAGATTACAACGACATACCTAGTGTAATCCCACAAGTCAGGTCTAGGAAGGGTAAGGCGTATGCAAACCTTACTACATTGGGAGGTAGAAAGGTTGTTTTCTATTGGCCCTCGGCTCAAGCAAAAAGCATCTCAAAGTAGTTTGAAAAAGAAATAACGGAAGTAAAGAAATTATGGAGAAATAGTATAGAGAGCATGTCAAAATATTCTGAAAAAGAACAATAACTTCAACAAATTAGTGCGATAATCGAATACAAGAGACCACAAATAGTGACAGAAATCAAAGGACAAAAACTACAAGAGAAGTACTACTACTACTAGTATGGAAGGATAAATAAGACAACACTCTACTATCTTTCTACCACGATCCTTGTCCTCTACAACCTCCTATCTAAGGTTATGTCCTTGGTAAGCAGCTACTTGTTCTAGTAAATTCTCCAGAAAAATATTTGTACTCTTAAATGTTCACCCTTTCTTCAAGTCCAATGAAGAAAATTTTCTATTAGGCAACTCGGAGTTAGGGTGCTTGACTAAACTGTTAGATCAACCACCTATGATCCTCCACACAACATGGAAACTAGGCTTGGGTTGCCTAAACAAGCAGGACACTTTGTGAGCTTATCATTTTCTAGTTTCTTTGAAGCTTTGTTGCATCATTGTTACTCAGCGTGGAGACTAGTTGGGATTGTTTGTCTTCTTGTCCTGCTACTTTTGATGAAGGCTGCCTAACCAATAAATATCAAAATTTTCTTGATCAAGTGTTAATAACTATCTAATTAGTTCTTTGCCTAATAAAAATAAAACTATCAGTCAAATTAGTTTTAGGATATTTGACCACACTTATCGGCGTTGTTGCTGATGTGGCCCCAAGTACTAGATTAAATAAGAAAGACATTCATATATTGAATATTATAAGAGAAATAGTTTATTGACTTTTGTATGACTTCGATAGCGTGGAACTGGCATAGTCTGTGTTGTACAGCTTTCTTCTTGTCTTGTTCAGACAAAAAAGTAATGTATATAATTATTTAAATAACATCTCCATTAATAAATTTCACGATATTTAACGCAATCAGAGAATAAACATAAACCTAAATTCAAATTGTTACTGTATGAAACACCTCATTTTGTACTTACCATGTGAAAAAATTAAATCTCACACCCACTAATAAAACTAAACATTCAGTAGAAACAATTGATTCTCTCTGTTAAATACCACTTTATTCTTTAGATTGCCTTATAGTCAATGCTTCCCAGTCTGTTGCATATATTTTTACTCTCATTTAACTAAAAAGTGAAAAAAGTTCCATAATACTAACCTCTTGTACTTGCCCATATTACTTATATGGGGGTGACTCACTTCACTTCTGCCGTTTCCAAAGCTGGTCTCGATCCTCAAAACCCGGCAGTCAACCCCTCCCTTGGCCGGTTCATGAGGTGTACTAGTAGTTAGGGAATTGCATGCATACTGAATACGTCATTTGGTTAATCATAAACTGGGACCAAGTTTCTTTTGAAAATGATTGGATCCAATGATGACCTTGGTCTTTAACTTTTCTTCATCTGGATCAGAATATGATACATTTCAGAACAAATGGGGTGGGTTCGTAACTCTTTTATCTGGTACCTGTGTCCGTGAGGGCTTTGGATGGAGCATGTCATCCGCCTTAGTCCAGGATTAGGATTGGTAGTTGGTGAAAGGAGTTATTATATGATATCTGGTGTCAGAAGTAACCAAATGCCTTTAACATATATATAACACATATAAGGTTCACTGTTACACTCCATAATATATAATTATGCAGGATTTCTTTGTCCCATCAGCCTTTACTACATAAGGCATCATGAGTAAATTGTAGCATAAAGACTCGAATATGGCAATCATTCTAGAGAACTTTGTTACTGAAAAGTGCAAACTGAAGTTGTCAAGTTTTAGTATGAAGCCCTTATAATTGCATATTCAATCTGCAACTGTCCTATTCAGGCCTGAATATACATTTACAATCGAATTTTGACTTCACATTCAATGACATGAAAGTAATATTGTCGTCATCATGCCTGGTTCGTGACCAAGTTCATCAATTACAAACATTACGTAGTTTGGCACTGGAATGTGGAGTCAAGTAACTATCAAAATGTTTACTTTTTGGGTAATCCATAATGAAATGAGATATGGCAGTGGAAGGATTCCAGGAAAGCTGCGGGTGTGTTAATGATGGACGTGACTGGTGAATTTGAAATTTAGATTGAAGTAGGAAGGTAAGACAGGGGTGGCGGAGCTACAGTTTTGTTGGCCAACTAAACAACAATTGTGGCTGGTGCACAGTGGAGACAGCATGGTAAATGCTTTCTCTGGTATGGGGTTCTGTGATTCTTGAAGGTCTGCGGTCGAGTGAGTTATTTGGTTGTAGAGGATGAAAATGTAATTTGTAGTGGGCCTGGTGGCCGCTTCAAAAGTTGTGGAGGCAGACAGTGGAACAGGATGCATTTTTCAGTTTGGAACTTATGGGCGCATTTTCTGAATTTTTGACTCATATTCCAATATGTGATTTTAGAAGGGCACTGAAAATGGACAGTGTTATCTTTTTCCGTATCTTAATGGAGGGGTAGACATTGGAAGGATGCAAGAATGAGTGTGTAAGATATCAACGTAGAAACAGAATGAGAGTCATCGTATTGCAGTATTATATTCTTAAAGATATTTGTAATACATAGCGAGTCTCAAATTGCTAGTGTGGATTTTGATTTTTTTTCTCTACTTGTATAACAGGAACTGAAGGAAAGAATTGAACGTGTGAAGGAGAAGAGCGACAAAGATGGAGTTCTTGCAACAAACAATGAATTCAGTGAAGAAATGATGAACATCCGTAAAGACTTTGTTTCCATACACGGGGAGATGGTTCTTATTAAAAATTATAGCTCATTAAATTTGG</genome_strand>
        <mrna_strand>CTAATTTGAGTTCCTTTGGTTGGTGGGTGAGGGAATTGCATATCCTAAACTCAAAATTGCTAATTCTTTGTGAGAATCTAACATTTTTGTAAAATTTTGAACTATATGTTATTGGATTTCAAGAACTCCAAAAAAAAGCAAAATTCTGTTTAAAAATCAGTGTGTTTAGACGAATTTGTATAAAATCAAGCGATTGCCGGTGATATGAAATTCGGGAAAGAATTCAGCATCCATTTGGAAGAAACCCTACCTGAATGGAGGGATAAATACTTGTGTTACAAGCCGTTGAAGAAGCTTATCAAGCACATCCCTTCTTNCANNGTCGATAATACACCTCCGTTACCGCCGCTGCCGCCGGCGACGGCAGCCGCGACGGAGCTACAGGATTGGTTTATCAGAATTCTCAATGAGGAACTCGACAAGTTCAACGATTTCTACGTGGATAAAGAAGAAGACTTCATTATCCGTTTCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTGAAGGAAAGAATTGAACGTGTGAAGGAGAAGAGCGACAAAGATGGAGTTCTTGCAACAAACAATGAATTCAGTGAAGAAATGATGAACATCCGTAAAGACTTTGTTTCCATACACGGNGAGATGGTTCTTCTGAAAAATTATAGCTCATTAAATTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E269388" ref_strand="+" ref_description="SGN-E269388 [cLEM-18-P13]">
      <seq>ggaattgcatatcctaaactcaaaattgctaattctttgtgagaatctaacatttttgtaaaattttgaactatatgttattggatttcaagaactccaaaaaaaagcaaaattctgtttaaaaatcagtgtgtttagacgaatttgtataaaatcaagcgattgccggtgatatgaaattcgggaaagaattcagcatccatttggaagaaaccctacctgaatggagggataaatacttgtgttacaagccgttgaagaagcttatcaagcacatcccttcttccaccgccgataatacacctccgttaccgccgctgccgccggcgacggcagccgcgacggagctacaggattggtttatcagaattctcaatgaggaactcgacaagttcaacgatttctacgtggataaagaagaagacttcattatccgtttccaggaactgaaggaaagaattgaacgtgtgaaggagaagagcgacaaagatggagttcttgcaacaaacaatgaattcagtgaagaaatgatgaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="111317" stop="106389"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111017" g_stop="110575" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="443" r_length="443" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110574" i_stop="106783" i_length="3792">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106782" g_stop="106689" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="537" r_length="94" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E269388" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E269388" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111017" e_stop="110575"/>
          <exon e_start="106782" e_stop="106689"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATTGCATATCCTAAACTCAAAATTGCTAATTCTTTGTGAGAATCTAACATTTTTGTAAAATTTTGAACTATATGTTATTGGATTTCAAGAACTCCAAAAAAAAGCAAAATTCTGTTTAAAAATCAGTGTGTTTAGACGAATTTGTATAAAATCAAGCGATTGCCGGTGATATGAAATTCGGGAAAGAATTCAGCATCCATTTGGAAGAAACCCTACCTGAATGGAGGGATAAATACTTGTGTTACAAGCCGTTGAAGAAGCTTATCAAGCACATCCCTTCTTCCACCGCCGATAATACACCTCCGTTACCGCCGCTGCCGCCGGCGACGGCAGCCGCGACGGAGCTACAGGATTGGTTTATCAGAATTCTCAATGAGGAACTCGACAAGTTCAACGATTTCTACGTGGATAAAGAAGAAGACTTCATTATCCGTTTCCAGGTTTCGTTTTTTTTTTCTTTTCTATTTTAAAAAAATAAAATAAAAATCTTCGCTTTGCCTGTTTGTAATTCTGAAATTTAAATTTTTGTTTACAGATTCCCGTTAAAAAATTCAATTTTTGTTTTGGTGTGAAGAGACTGCGTAATTGTTACGCTTGATTGGTTTGATTAATTTAAAACTTGAACAGAATTTTACAGTTGATAAGCTCAGCTTACAATTTTCTTCATTTCAATCACTTGGATAATTACACCTTGATTCTGGATTAGTTGTGGTCAACTTGCATGAATCCGTTATATCCATTGCGCTTTGTTGAAGTCCTAAAAACCAAAATTTCATCAGAATTTTTACTTAATGATTTGCATAAATTGGATCAAGTTGTTAGCTTTTGATGGATCTGGGAATGTGAAGGTTTTAAGGAATATGTTTCTGGTGTTTACGTGTTGTATTATTTGTAGCTTATTGTCGTAGAGAGGGATAAATGTACTGCCACTTCTGTGAGCGGCAATTAGTACGTGGTGAGCGGTGAGATAAAGGATGGAGGAATTGAAGAATATATATTTTTAGATATTCAAGAGTACTAGGATTTGTTTAAGTGACAAAGTCTCTCTTTTTGATGGATATGCTGCTGTAACATTTGATGTGTAAACGGAGAAGTAAATCACTATATGAATCACAACAAAGGCCAAAAAATGTAAATGCAACTATGACGAACTTAAGAGCAATGCCAATAAATGATGGTCCCTTGTGGACTTCAGATGGATGGTTCAAGTGATTGAGAGGAGATATATATACACGACATACCCCAAAAATAGAAGCAAATAGTTGGGTGCTGGTGGAGGGAAATAGTATGACATGAGCTTCCTGGAGAATATTCTTAGTAAAGCTGGGGATATAGAAGTATCTTAATGGCATATTCCCCCTACTGCCTTTATAATTTGTTGAGCTGATTTGACCAAGGAAATGCCAAACACTAAACATCAGAATATCTCTGGCTTTATCATATAACACTAACACCCGACCGAACAGATTACAACGACATACCTAGTGTAATCCCACAAGTCAGGTCTAGGAAGGGTAAGGCGTATGCAAACCTTACTACATTGGGAGGTAGAAAGGTTGTTTTCTATTGGCCCTCGGCTCAAGCAAAAAGCATCTCAAAGTAGTTTGAAAAAGAAATAACGGAAGTAAAGAAATTATGGAGAAATAGTATAGAGAGCATGTCAAAATATTCTGAAAAAGAACAATAACTTCAACAAATTAGTGCGATAATCGAATACAAGAGACCACAAATAGTGACAGAAATCAAAGGACAAAAACTACAAGAGAAGTACTACTACTACTAGTATGGAAGGATAAATAAGACAACACTCTACTATCTTTCTACCACGATCCTTGTCCTCTACAACCTCCTATCTAAGGTTATGTCCTTGGTAAGCAGCTACTTGTTCTAGTAAATTCTCCAGAAAAATATTTGTACTCTTAAATGTTCACCCTTTCTTCAAGTCCAATGAAGAAAATTTTCTATTAGGCAACTCGGAGTTAGGGTGCTTGACTAAACTGTTAGATCAACCACCTATGATCCTCCACACAACATGGAAACTAGGCTTGGGTTGCCTAAACAAGCAGGACACTTTGTGAGCTTATCATTTTCTAGTTTCTTTGAAGCTTTGTTGCATCATTGTTACTCAGCGTGGAGACTAGTTGGGATTGTTTGTCTTCTTGTCCTGCTACTTTTGATGAAGGCTGCCTAACCAATAAATATCAAAATTTTCTTGATCAAGTGTTAATAACTATCTAATTAGTTCTTTGCCTAATAAAAATAAAACTATCAGTCAAATTAGTTTTAGGATATTTGACCACACTTATCGGCGTTGTTGCTGATGTGGCCCCAAGTACTAGATTAAATAAGAAAGACATTCATATATTGAATATTATAAGAGAAATAGTTTATTGACTTTTGTATGACTTCGATAGCGTGGAACTGGCATAGTCTGTGTTGTACAGCTTTCTTCTTGTCTTGTTCAGACAAAAAAGTAATGTATATAATTATTTAAATAACATCTCCATTAATAAATTTCACGATATTTAACGCAATCAGAGAATAAACATAAACCTAAATTCAAATTGTTACTGTATGAAACACCTCATTTTGTACTTACCATGTGAAAAAATTAAATCTCACACCCACTAATAAAACTAAACATTCAGTAGAAACAATTGATTCTCTCTGTTAAATACCACTTTATTCTTTAGATTGCCTTATAGTCAATGCTTCCCAGTCTGTTGCATATATTTTTACTCTCATTTAACTAAAAAGTGAAAAAAGTTCCATAATACTAACCTCTTGTACTTGCCCATATTACTTATATGGGGGTGACTCACTTCACTTCTGCCGTTTCCAAAGCTGGTCTCGATCCTCAAAACCCGGCAGTCAACCCCTCCCTTGGCCGGTTCATGAGGTGTACTAGTAGTTAGGGAATTGCATGCATACTGAATACGTCATTTGGTTAATCATAAACTGGGACCAAGTTTCTTTTGAAAATGATTGGATCCAATGATGACCTTGGTCTTTAACTTTTCTTCATCTGGATCAGAATATGATACATTTCAGAACAAATGGGGTGGGTTCGTAACTCTTTTATCTGGTACCTGTGTCCGTGAGGGCTTTGGATGGAGCATGTCATCCGCCTTAGTCCAGGATTAGGATTGGTAGTTGGTGAAAGGAGTTATTATATGATATCTGGTGTCAGAAGTAACCAAATGCCTTTAACATATATATAACACATATAAGGTTCACTGTTACACTCCATAATATATAATTATGCAGGATTTCTTTGTCCCATCAGCCTTTACTACATAAGGCATCATGAGTAAATTGTAGCATAAAGACTCGAATATGGCAATCATTCTAGAGAACTTTGTTACTGAAAAGTGCAAACTGAAGTTGTCAAGTTTTAGTATGAAGCCCTTATAATTGCATATTCAATCTGCAACTGTCCTATTCAGGCCTGAATATACATTTACAATCGAATTTTGACTTCACATTCAATGACATGAAAGTAATATTGTCGTCATCATGCCTGGTTCGTGACCAAGTTCATCAATTACAAACATTACGTAGTTTGGCACTGGAATGTGGAGTCAAGTAACTATCAAAATGTTTACTTTTTGGGTAATCCATAATGAAATGAGATATGGCAGTGGAAGGATTCCAGGAAAGCTGCGGGTGTGTTAATGATGGACGTGACTGGTGAATTTGAAATTTAGATTGAAGTAGGAAGGTAAGACAGGGGTGGCGGAGCTACAGTTTTGTTGGCCAACTAAACAACAATTGTGGCTGGTGCACAGTGGAGACAGCATGGTAAATGCTTTCTCTGGTATGGGGTTCTGTGATTCTTGAAGGTCTGCGGTCGAGTGAGTTATTTGGTTGTAGAGGATGAAAATGTAATTTGTAGTGGGCCTGGTGGCCGCTTCAAAAGTTGTGGAGGCAGACAGTGGAACAGGATGCATTTTTCAGTTTGGAACTTATGGGCGCATTTTCTGAATTTTTGACTCATATTCCAATATGTGATTTTAGAAGGGCACTGAAAATGGACAGTGTTATCTTTTTCCGTATCTTAATGGAGGGGTAGACATTGGAAGGATGCAAGAATGAGTGTGTAAGATATCAACGTAGAAACAGAATGAGAGTCATCGTATTGCAGTATTATATTCTTAAAGATATTTGTAATACATAGCGAGTCTCAAATTGCTAGTGTGGATTTTGATTTTTTTTCTCTACTTGTATAACAGGAACTGAAGGAAAGAATTGAACGTGTGAAGGAGAAGAGCGACAAAGATGGAGTTCTTGCAACAAACAATGAATTCAGTGAAGAAATGATGAACA</genome_strand>
        <mrna_strand>GGAATTGCATATCCTAAACTCAAAATTGCTAATTCTTTGTGAGAATCTAACATTTTTGTAAAATTTTGAACTATATGTTATTGGATTTCAAGAACTCCAAAAAAAAGCAAAATTCTGTTTAAAAATCAGTGTGTTTAGACGAATTTGTATAAAATCAAGCGATTGCCGGTGATATGAAATTCGGGAAAGAATTCAGCATCCATTTGGAAGAAACCCTACCTGAATGGAGGGATAAATACTTGTGTTACAAGCCGTTGAAGAAGCTTATCAAGCACATCCCTTCTTCCACCGCCGATAATACACCTCCGTTACCGCCGCTGCCGCCGGCGACGGCAGCCGCGACGGAGCTACAGGATTGGTTTATCAGAATTCTCAATGAGGAACTCGACAAGTTCAACGATTTCTACGTGGATAAAGAAGAAGACTTCATTATCCGTTTCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTGAAGGAAAGAATTGAACGTGTGAAGGAGAAGAGCGACAAAGATGGAGTTCTTGCAACAAACAATGAATTCAGTGAAGAAATGATGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E222188" ref_strand="+" ref_description="SGN-E222188 [cLEL-16-G9](-)">
      <seq>tccaggcttgccgagtcatccggaatatcaccttgcaaagaaacaaatgactggctttggtggtgtggtcagttttgaggttgatggagacctccntactactgcaaaatttgtggatgctctgaggattccttatattgctccatcgtttggaggttgtgagagcattgtggaccaaccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgctgtttcacctgcaacgatttttttccttttccttttcatcctgatttcgttgttcgtacttgtgttattgctgacttccatctcgtatccaattgtttgaacctaattaaaggatcgtctagtagatgattcagtccatccacttatttcatgtcgtgtttcttaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="113899" stop="51752"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113599" g_stop="113521" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89">
            <donor d_prob="0.628" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113431" g_stop="113313" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="198" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113154" g_stop="112860" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="493" r_length="295" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="112859" i_stop="110547" i_length="2313">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="110546" g_stop="110528" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="512" r_length="19" r_score="0.842"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E222188" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222188" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113599" e_stop="113521"/>
          <exon e_start="113431" e_stop="113313"/>
          <exon e_start="113154" e_stop="112860"/>
          <exon e_start="110546" e_stop="110528"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAGGTCTGTAGATCTATGGTCTTTTTTTAGCCAGGAATCCCTGTCAGTTCTCTCGCTTTCAGTATATTAAAGGGCTATATTTTTTCTATAAGGTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTTCTTAATCTCTCAATTTCTTCAAGGATGAATATTCCTCTCATGTCGTTTAAAGAATGCATTTTTTTTAAAAAAAAATGGAAGGGGAGAAAATCAATTTGTGTTTACTGTGTTGGAGACTCCTTATTAGTTAGTTACCTGTATGTTAAGGTCTTATTTGGTCATAGATTTTTCAAATAATATTTGGGGGAAAATTTGGCAAATAGTTTTTATTATTTGGTCATAGATTTTTCAAATAATATTTGGGGAAAAATTTGGCAAATAGTTTTTATTATTTGGTCATAGATTTTTTAAATCATATTTGGGGGAAAATTTGGCAAATAGTTTTTATTATTTGGTCATAGATTTTTCAAATAACATTTGGGGGAAAATTTGGCAAATAGTTTTTATCCATATAATTTGCCATTATTTGGTAAATGTTTTTGACAAATATCTCAAATGCTATAATAATAGTTTTTTTTTTTTTTTTTTTTTATATATATATATTTGGGTCAAATTTCATTGGAATCTTTTGAAAATTAAAATTTTATATCAATTTTTTATTATTTTACAAAAAATCATCTATAGTATTTGTTTGCTTTGTACTACATTATTTTTTTATGTGAATATCAAAGTAGTAATGAAATAGTCTGTGAATATGAAAGGAATAATATGGTGGTTGATGAAAATGATAAATAATCATCTTAGGGTATACTTTGTTACTTCACGATGTATGGAATGATGTCTGTTGTATTCACTCCAAACTACCACGTTGCTTCAGTGTCATGGACGCTACATATGATATTTGTTGCATCAAAAATTCAATTGACTTATAATACAAATTTATGGTTAGTTTTGATAGTTTTTAAAACTTATGAATATAAATAATATTTTTCTAAAAAAGTGAAATATATTTCTCAAATTTCTGATTTTCTCGACGCACAATTTCAAATAATGATTTCAAAAAATAATAAGCACTATATTAAGTACTTAAAGGTTGCTATTCTTTTATGAGAAAAAAATCACTAATCATTGATTGACAACAATTTTCTAAAATATGTGTTGTTCCTGCGTCTCTTGGGGGACAGAATGGCTAAGCTGACATGACACTCAACTACAAGTTGTAATCGAATATTCTTTCAAAAACCAATGGCCCATGGCTATGAATTTCGCATGTAAAAGTAAAAATTCATTTTTTTTATTTATGACTTTTATAAACTTTTTCTGCTGTCAAGGATTATTGAATATATATTAACAAATAAAGCTCAGCACAATGATTTCGTAATTCTTTTACAAATTTGTTTTTTAATTTTATATTTATTTATGAGATATATTTATCCATAGATATAAAATAATTTTCCTCTACTCCATTTGTAGAACAAAGTATTTTAAAAGGTGAGGGCGTAAGTTAAGACGTTTAATACATTGCGGAACAAGGCGTAAGCCATGAGAAATGGGACATATGTCCCATGGATTTATGGGGCGTAGTCTTATGTATATTCAATTTTATAGTTTTGTTATTATTAATAGAATAGGTAAAAGTAAACTTTTCAATGATTTGTGATTTTTATTTGAGATAAGTATCAATAATCAATAATGAAGAAAAAAACATTACAATTATTATTTGTGAAATAGCATTACACCAATACTAAAAATATGATTTAAAGAAAAAACAAATTACCAATATTCGGGAGTAACATTAGAAAAAATGCTTTTGAAAACACCGTGTAAAGATATTATTTTTATCCTTAAAGAAGTATTTTGATGGTAATAATATAAAAAGTTGGATACATTTATGATAAACTTAAATTCTTTGTTTAATAAAAACTTATAAATCTTGCTAATTTGAGTTCCTTTGGTTGGTGGGTGAGGGAATTGCATATCCTAAACTCAAAATTGCTAATTCTTTGTGAGAATCTAACATTTTTGTAAAATTTTGAACTATATGTTATTGGATTTCAAGAACTCCAAAAAAAAGCAAAATTCTGTTTAAAAATCAGTGTGTTTAGACGAATTTGTATAAAATCAAGCGATTGCCGGTGATATGAAATTCGGGAAAGAATTCAGCATCCATTTGGAAGAAACCCTACCTGAATGGAGGGATAAATACTTGTGTTACAAGCCGTTGAAGAAGCTTATCAAGCACATCCCTTCTTCCACCGCCGATAATACACCTCCGTTACCGCCGCTGCCGCCGGCGACGGCAGCCGCGACGGAGCTACAGGATTGGTTTATCAGAATTCTCAATGAGGAACTCGACAAGTTCAACGATTTCTACGTGGATAAAGAAGAAGACTTCATTATCCGTTTCCAGGTTTCGTTTTTTTTTTCTTTTCTATTTTAAAAAAATAAAATAAAAAT</genome_strand>
        <mrna_strand>TCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAG.........................................................................................GTTGATGGAGACCTCCNTACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATCCACTTATTTCATGTCGTGTTTCTTAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E377060" ref_strand="+" ref_description="SGN-E377060 [TUS-21-C5](-)">
      <seq>agcaacaaaattctactgcattgaggatggccgaaattttaaaggctcatcccaaggtgaaacacgtctattatccaggctgccgaagtcatccgaaatatccccttgcaaaaaaacaaatgactggctttggtggtgtggtcagttttgaggttgatggagacctcctaactactgcaaaatttgtggatgctttgaggattccttatattgctccatcgtttggaggttgtgagagcattgtggaccaaccagcaataatgttttattgggattttagccagtttgataaagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaagattttgaaaatgtgaaagctgatgtttttcaggctttggattccatttagggtgctgtttcacctgcaacgatttttttccttttccttttcatcctgatttcgttgttcggacttgtgttattgctgacttccatttcgtatccaattgtttgaacctaattaaaggatcgtttagtaaatgattcagtccattaaattatttcatgtcgtgttttttaatctctcaattttttcaaggatgaatattcctctcatgtcgtttaaagaatgcattttttttaaaaaaaaatggaaggggagaaaatcaatttgtgtttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="114496" stop="24982"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114404" g_stop="114349" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="114348" i_stop="113617" i_length="732">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.659" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113616" g_stop="113521" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="152" r_length="96" r_score="0.938"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89">
            <donor d_prob="0.628" d_score="0.96"/>
            <acceptor a_prob="0.864" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113431" g_stop="113313" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="271" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="0.98"/>
            <acceptor a_prob="0.965" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="113154" g_stop="112761" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="665" r_length="394" r_score="0.967"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="112760" i_stop="111240" i_length="1521">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="111239" g_stop="111209" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="666" r_stop="696" r_length="31" r_score="0.677"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E377060" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377060" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114404" e_stop="114349"/>
          <exon e_start="113616" e_stop="113521"/>
          <exon e_start="113431" e_stop="113313"/>
          <exon e_start="113154" e_stop="112761"/>
          <exon e_start="111239" e_stop="111209"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAACAAAATTCTACTGCATTGAGGATGGCCGAAATTTTAGAGGCTCATCCCAAGGTACTCTAGGCTTCAATAGCTTTGTTAGTCATGATTTGAAATTCACATTTTACTAGAGCACAATTACCTTATTAATATGCATGATAATTCATGTTTATGTAAAAGTAAGAATGTTCAACTTGATGTTTGTTAGAGTAAGTGAAAATAAAGCGCTGAAAGCAACTTAAGAAGAAGATGCAGTCATTATTAGTTTAAAATAAGTAGAAGAAGATGCACCATCAATATGGGTGATCTTTTAAGCCAGATAAACTGAACGATCTTTTCTATCACTCCTTTGTACCCGTAGATTCTGCTGTTAACATCACAAAGCTGTACTTTTTGGGTGATTCTGTTTTTTCTTTCCTTCATCACTTAACAAAGACTATTCTTACATCCGTGGTTGCTACTTTGGTGTGCTTCCTAGTCGTCCTCTACTACAACATGCAGACTCACTAAGACAAATAGGTTGTAAACAAGTAAACATTCTTAAAGTGTTGATTAGTATCGTCTTAACTCTATAAAAAATTTCTATGTTACTTGTACAGTTACACTCCCTGTACGACCTACCTTTAGTCAGGTAGCTACTTCATCCTAATAATGCATGATTGACTCATTACTGAACATAAATTTACTATCGTACCACACTTCTAGCTTATCTATGAGCAGTAGCATTAAAGTTCAGAGGTCTTGTTTTTCCTGCGTTTCATTAGGATCTCTGCAAGTGCTGTCATATCTGAATAAAATGAGTTGCAGGTGAAACACGTCTATTATCCAGGCTTGCCG-AGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAGGTCTGTAGATCTATGGTCTTTTTTTAGCCAGGAATCCCTGTCAGTTCTCTCGCTTTCAGTATATTAAAGGGCTATATTTTTTCTATAAGGTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTTCTTAATCTCTCAATTTCTTCAAGGATGAATATTCCTCTCATGTCGTTTAAAGAATGCATTTTTTTTAAAAAAAAATGGAAGGGGAGAAAATCAATTTGTGTTTACTGTGTTGGAGACTCCTTATTAGTTAGTTACCTGTATGTTAAGGTCTTATTTGGTCATAGATTTTTCAAATAATATTTGGGGGAAAATTTGGCAAATAGTTTTTATTATTTGGTCATAGATTTTTCAAATAATATTTGGGGAAAAATTTGGCAAATAGTTTTTATTATTTGGTCATAGATTTTTTAAATCATATTTGGGGGAAAATTTGGCAAATAGTTTTTATTATTTGGTCATAGATTTTTCAAATAACATTTGGGGGAAAATTTGGCAAATAGTTTTTATCCATATAATTTGCCATTATTTGGTAAATGTTTTTGACAAATATCTCAAATGCTATAATAATAGTTTTTTTTTTTTTTTTTTTTTATATATATATATTTGGGTCAAATTTCATTGGAATCTTTTGAAAATTAAAATTTTATATCAATTTTTTATTATTTTACAAAAAATCATCTATAGTATTTGTTTGCTTTGTACTACATTATTTTTTTATGTGAATATCAAAGTAGTAATGAAATAGTCTGTGAATATGAAAGGAATAATATGGTGGTTGATGAAAATGATAAATAATCATCTTAGGGTATACTTTGTTACTTCACGATGTATGGAATGATGTCTGTTGTATTCACTCCAAACTACCACGTTGCTTCAGTGTCATGGACGCTACATATGATATTTGTTGCATCAAAAATTCAATTGACTTATAATACAAATTTATGGTTAGTTTTGATAGTTTTTAAAACTTATGAATATAAATAATATTTTTCTAAAAAAGTGAAATATATTTCTCAAATTTCTGATTTTCTCGACGCACAATTTCAAATAATGATTTCAAAAAATAATAAGCACTATATTAAGTACTTAAAGGTTGCTATTCTTTTATGAGAAAAAAATCACTAATCATTGATTGACAACAATTTTCTAAAATATGTGTTGTTCCTGCGTCTCTTGGGGGACAGAATGGCTAAGCTGACATGACACTCAACTACAAGTTGTAATCGAATATTCTTTCAAAAACCAATGGCCCATGGCTATGAATTTCGCATGTAAAAGTAAAAATTCATTTTTTTTATTTATGACTTTTATAAACTTTTTCTGCTGTCAAGGATTATTGAATATATATTAACAAATAAAGCTCAGCACAATGATTTCGTAATTCTTTTACAAATTTGTTTTTTAATTTTATATTTATTTATGAGATATATTTATCCATAGATATAAAATAATTTTCCTCTACTCCATTTGTAGAACAAAGTATTTTAAAAGGTGAGGGCGTAAGTTAAGACGTTTAATACATTGCGGAACAAGGCGTAAGCCATGAGAAATGGGACATATGTCCCATGGATTTATGGGGCGTAGTCTTATGTATATTCAATTTTATAGTTTTGTTATTATTAATAGAATAGGTAAAAGTAAACTTTTCAATGATTTGTGATTTTTATTTGAGATAAGTATCAATAATCAATAATGAAGAAAAAAACATTACAATTATTATTTGTGAAATAGCATTACACCAATACTAAAAATATGATTTAAAGAAAAAACAAATTA</genome_strand>
        <mrna_strand>AGCAACAAAATTCTACTGCATTGAGGATGGCCGAAATTTTAAAGGCTCATCCCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAACACGTCTATTATCCAGGC-TGCCGAAGTCATCCGAAATATCCCCTTGCAAAAAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAG.........................................................................................GTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTTTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTTTTATTG..............................................................................................................................................................GGATTTTAGCCAGTTTGATAAAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAAATGTGAAAGCTGATGTTTTTCAGGCTTTGGATTCCATTTAGGGTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGGACTTGTGTTATTGCTGACTTCCATTTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTTTAGTAAATGATTCAGTCCATTAAATTATTTCATGTCGTGTTTTTTAATCTCTCAATTTTTTCAAGGATGAATATTCCTCTCATGTCGTTTAAAGAATGCATTTTTTTTAAAAAAAAATGGAAGGGGAGAAAATCAATTTGTGTTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E390360" ref_strand="+" ref_description="SGN-E390360 [TUS-41-A17](-)">
      <seq>ttttgcaggttgtattagtggtcctgaaaaattagtttcagtaatccgaaacttgcatcatatcctgggtggtgctttcaatcctaatgctgcatattttatcatccgaggcatgaagacgctgcatttttgtgtacagcaacaaaattttactgcattgaggatggccgaaattttagaggctcatcccaaggtgaaacacgtttattatccaggcttgccgagtcatccggaatatcaccttgcaaagaaacaaatgactggctttggtggggtggtcagttttgaggttgatggagacctcctaaatactgcaaaatttgtggatgttttgaggattccttatattgctccatcgtttggaggttgtgagagcattgtggaccaaccagcaataatgttttattgggattttagccagtttgatagagcaaagtatggcattttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaaggtgatgtttttcaggctttggattccatttagggtgctgtttcccctgcaacgatttttttccttttccttttcatcctgatttcgttgtttgtacttgtgttattgctgacttccattttgtatccaattgtttgaacctaattaaaggattgtttagtagatgattcagtcccttaaattatttcatgtcgtgttttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="114496" stop="24982"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114496" g_stop="114349" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="193" r_length="139" r_score="0.845"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="114348" i_stop="113617" i_length="732">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.659" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113616" g_stop="113521" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="289" r_length="96" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89">
            <donor d_prob="0.628" d_score="0.98"/>
            <acceptor a_prob="0.864" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113431" g_stop="113313" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="408" r_length="119" r_score="0.966"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="0.98"/>
            <acceptor a_prob="0.965" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="113154" g_stop="112861" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="702" r_length="294" r_score="0.952"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="112860" i_stop="111313" i_length="1548">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.61"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="111312" g_stop="111272" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="703" r_stop="743" r_length="41" r_score="0.610"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E390360" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="0.939" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E390360" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114496" e_stop="114349"/>
          <exon e_start="113616" e_stop="113521"/>
          <exon e_start="113431" e_stop="113313"/>
          <exon e_start="113154" e_stop="112861"/>
          <exon e_start="111312" e_stop="111272"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATTTTATAGAAGTCTGATGCAATTTTCCCAACTGCCAGAATGCTGCATATCTTATCATCCGAGGCATGAAGACGCTGCATCTTCGTGTACAGCAACAAAATTCTACTGCATTGAGGATGGCCGAAATTTTAGAGGCTCATCCCAAGGTACTCTAGGCTTCAATAGCTTTGTTAGTCATGATTTGAAATTCACATTTTACTAGAGCACAATTACCTTATTAATATGCATGATAATTCATGTTTATGTAAAAGTAAGAATGTTCAACTTGATGTTTGTTAGAGTAAGTGAAAATAAAGCGCTGAAAGCAACTTAAGAAGAAGATGCAGTCATTATTAGTTTAAAATAAGTAGAAGAAGATGCACCATCAATATGGGTGATCTTTTAAGCCAGATAAACTGAACGATCTTTTCTATCACTCCTTTGTACCCGTAGATTCTGCTGTTAACATCACAAAGCTGTACTTTTTGGGTGATTCTGTTTTTTCTTTCCTTCATCACTTAACAAAGACTATTCTTACATCCGTGGTTGCTACTTTGGTGTGCTTCCTAGTCGTCCTCTACTACAACATGCAGACTCACTAAGACAAATAGGTTGTAAACAAGTAAACATTCTTAAAGTGTTGATTAGTATCGTCTTAACTCTATAAAAAATTTCTATGTTACTTGTACAGTTACACTCCCTGTACGACCTACCTTTAGTCAGGTAGCTACTTCATCCTAATAATGCATGATTGACTCATTACTGAACATAAATTTACTATCGTACCACACTTCTAGCTTATCTATGAGCAGTAGCATTAAAGTTCAGAGGTCTTGTTTTTCCTGCGTTTCATTAGGATCTCTGCAAGTGCTGTCATATCTGAATAAAATGAGTTGCAGGTGAAACACGTCTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAGGTCTGTAGATCTATGGTCTTTTTTTAGCCAGGAATCCCTGTCAGTTCTCTCGCTTTCAGTATATTAAAGGGCTATATTTTTTCTATAAGGTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTTCTTAATCTCTCAATTTCTTCAAGGATGAATATTCCTCTCATGTCGTTTAAAGAATGCATTTTTTTTAAAAAAAAATGGAAGGGGAGAAAATCAATTTGTGTTTACTGTGTTGGAGACTCCTTATTAGTTAGTTACCTGTATGTTAAGGTCTTATTTGGTCATAGATTTTTCAAATAATATTTGGGGGAAAATTTGGCAAATAGTTTTTATTATTTGGTCATAGATTTTTCAAATAATATTTGGGGAAAAATTTGGCAAATAGTTTTTATTATTTGGTCATAGATTTTTTAAATCATATTTGGGGGAAAATTTGGCAAATAGTTTTTATTATTTGGTCATAGATTTTTCAAATAACATTTGGGGGAAAATTTGGCAAATAGTTTTTATCCATATAATTTGCCATTATTTGGTAAATGTTTTTGACAAATATCTCAAATGCTATAATAATAGTTTTTTTTTTTTTTTTTTTTTATATATATATATTTGGGTCAAATTTCATTGGAATCTTTTGAAAATTAAAATTTTATATCAATTTTTTATTATTTTACAAAAAATCATCTATAGTATTTGTTTGCTTTGTACTACATTATTTTTTTATGTGAATATCAAAGTAGTAATGAAATAGTCTGTGAATATGAAAGGAATAATATGGTGGTTGATGAAAATGATAAATAATCATCTTAGGGTATACTTTGTTACTTCACGATGTATGGAATGATGTCTGTTGTATTCACTCCAAACTACCACGTTGCTTCAGTGTCATGGACGCTACATATGATATTTGTTGCATCAAAAATTCAATTGACTTATAATACAAATTTATGGTTAGTTTTGATAGTTTTTAAAACTTATGAATATAAATAATATTTTTCTAAAAAAGTGAAATATATTTCTCAAATTTCTGATTTTCTCGACGCACAATTTCAAATAATGATTTCAAAAAATAATAAGCACTATATTAAGTACTTAAAGGTTGCTATTCTTTTATGAGAAAAAAATCACTAATCATTGATTGACAACAATTTTCTAAAATATGTGTTGTTCCTGCGTCTCTTGGGGGACAGAATGGCTAAGCTGACATGACACTCAACTACAAGTTGTAATCGAATATTCTTTCAAAAACCAATGGCCCATGGCTATGAATTTCGCATGTAAAAGTAAAAATTCATTTTTTTTATTTATGACTTTTATAAACTTTTTCTGCTGTCAAGGATTATTGAATATATATTAACAAATAAAGCTCAGCACAATGATTTCGTAATTCTTTTACAAATTTGTTTTTTAATTTTATATTTATTTATGAGATATATTTATCCATAGATATAAAATAATTTTCCTCTACTCCATTTGTAGAACAAAGTATTTTAAAAGGTGAGGGCGTAAGTTAAGACGTTTAATACATTGCGGAACAAGGCGTAAGCCATGAGAAATGGGACATATGTCCCATGGATTTATGGGGCGTAGTCTTATGTATATTCAATTTTATAGTTTTGTTATTATTAATAGAATAGGTAAAAGTAAACTTTTCAATGATTTGTGATTTTTATTTGAGATAAGTATCAATAATCAATAATGAAGAAAAAAACATTACAA</genome_strand>
        <mrna_strand>GCATCATAT-CCTGGGTGGTGC---TTT--CAA-T-CC-TAATGCTGCATATTTTATCATCCGAGGCATGAAGACGCTGCATTTTTGTGTACAGCAACAAAATTTTACTGCATTGAGGATGGCCGAAATTTTAGAGGCTCATCCCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAACACGTTTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGGGTGGTCAGTTTTGAG.........................................................................................GTTGATGGAGACCTCCTAAATACTGCAAAATTTGTGGATGTTTTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTTTTATTG..............................................................................................................................................................GGATTTTAGCCAGTTTGATAGAGCAAAGTATGGCATTTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGGTGATGTTTTTCAGGCTTTGGATTCCATTTAGGGTGCTGTTTCCCCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTTGTACTTGTGTTATTGCTGACTTCCATTTTGTATCCAATTGTTTGAACCTAATTAAAGGATTGTTTAGTAGATGATTCAGTCCCTTAAATTATTTCATGTCGTGTTTTTTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E342350" ref_strand="+" ref_description="SGN-E342350 [cTOF-8-P17]">
      <seq>cgtctattatccaggcttgccgagtcatccggaatatcaccttgcaaagaaacaaatgactggctttggtggtgtggtcagttttgaggttgatggagacctcctaactactgcaaaatttgtggatgctctgaggattccttatattgctccatcgtttggaggttgtgagagcattgtggaccaaccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgctgtttcacctgcaacgatttttttccttttccttttcatcctgatttcgttgttcgtacttgtgttattgctgacttccatctcgtatccaattgtttgaacctaattaaaggatcgtctagtagatgattcagtccattaaattatttcatgtcgtgtttcttaatctctcaatttcttcaaggatgaatattcctctcaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="113908" stop="112525"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113608" g_stop="113521" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89">
            <donor d_prob="0.628" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113431" g_stop="113313" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="207" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113154" g_stop="112826" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="536" r_length="329" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="537" polyA_stop="554"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E342350" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E342350" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113608" e_stop="113521"/>
          <exon e_start="113431" e_stop="113313"/>
          <exon e_start="113154" e_stop="112826"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTCTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAGGTCTGTAGATCTATGGTCTTTTTTTAGCCAGGAATCCCTGTCAGTTCTCTCGCTTTCAGTATATTAAAGGGCTATATTTTTTCTATAAGGTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTTCTTAATCTCTCAATTTCTTCAAGGATGAATATTCCTCTC</genome_strand>
        <mrna_strand>CGTCTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAG.........................................................................................GTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTTCTTAATCTCTCAATTTCTTCAAGGATGAATATTCCTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E696885" ref_strand="+" ref_description="SGN-E696885 [LH_Ea10E19](-)">
      <seq>atccgaggcatgaagacgctgcatcttcgtgtacagcaacaaaattctactgcattgaggatggccgaaattttagaggctcatcccaaggtgaaacacgtctattatccaggcttgccgagtcatccggaatatcaccttgcaaagaaacaaatgactggctttggtggtgtggtcagttttgaggttgatggagacctcctaactactgcaaaatttgtggatgctctgaggattccttatattgctccatcgtttggaggttgtgagagcattgtggaccaaccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgtttcacctgcaacgattttttccttttccttttcatcctgatttcgttgttcgtacttgtgttattgctgacttccatcacgtatccaattggttgaacctaattaaaggatcatctagtagatgattcaatgcattaaattatttcatgtcgtgttccttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="114496" stop="112560"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114438" g_stop="114349" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="114348" i_stop="113617" i_length="732">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.659" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113616" g_stop="113521" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="186" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89">
            <donor d_prob="0.628" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113431" g_stop="113313" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="305" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="113154" g_stop="112861" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="595" r_length="290" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="596" polyA_stop="612"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E696885" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E696885" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114438" e_stop="114349"/>
          <exon e_start="113616" e_stop="113521"/>
          <exon e_start="113431" e_stop="113313"/>
          <exon e_start="113154" e_stop="112861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCGAGGCATGAAGACGCTGCATCTTCGTGTACAGCAACAAAATTCTACTGCATTGAGGATGGCCGAAATTTTAGAGGCTCATCCCAAGGTACTCTAGGCTTCAATAGCTTTGTTAGTCATGATTTGAAATTCACATTTTACTAGAGCACAATTACCTTATTAATATGCATGATAATTCATGTTTATGTAAAAGTAAGAATGTTCAACTTGATGTTTGTTAGAGTAAGTGAAAATAAAGCGCTGAAAGCAACTTAAGAAGAAGATGCAGTCATTATTAGTTTAAAATAAGTAGAAGAAGATGCACCATCAATATGGGTGATCTTTTAAGCCAGATAAACTGAACGATCTTTTCTATCACTCCTTTGTACCCGTAGATTCTGCTGTTAACATCACAAAGCTGTACTTTTTGGGTGATTCTGTTTTTTCTTTCCTTCATCACTTAACAAAGACTATTCTTACATCCGTGGTTGCTACTTTGGTGTGCTTCCTAGTCGTCCTCTACTACAACATGCAGACTCACTAAGACAAATAGGTTGTAAACAAGTAAACATTCTTAAAGTGTTGATTAGTATCGTCTTAACTCTATAAAAAATTTCTATGTTACTTGTACAGTTACACTCCCTGTACGACCTACCTTTAGTCAGGTAGCTACTTCATCCTAATAATGCATGATTGACTCATTACTGAACATAAATTTACTATCGTACCACACTTCTAGCTTATCTATGAGCAGTAGCATTAAAGTTCAGAGGTCTTGTTTTTCCTGCGTTTCATTAGGATCTCTGCAAGTGCTGTCATATCTGAATAAAATGAGTTGCAGGTGAAACACGTCTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAGGTCTGTAGATCTATGGTCTTTTTTTAGCCAGGAATCCCTGTCAGTTCTCTCGCTTTCAGTATATTAAAGGGCTATATTTTTTCTATAAGGTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTTCTTA</genome_strand>
        <mrna_strand>ATCCGAGGCATGAAGACGCTGCATCTTCGTGTACAGCAACAAAATTCTACTGCATTGAGGATGGCCGAAATTTTAGAGGCTCATCCCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAACACGTCTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAG.........................................................................................GTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTA-G--GCTGTTTCACCTGCAACGA-TTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCACGTATCCAATTGGTTGAACCTAATTAAAGGATCATCTAGTAGATGATTCAATGCATTAAATTATTTCATGTCGTGTTCCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E693045" ref_strand="+" ref_description="SGN-E693045 [LH_Ea10E19]">
      <seq>cgtttacgaggcatgaagacgctgcatcttcgtgtacagcaccaaaattctactgcattgaggatggccgaaattttagaggctcatcccaaggtgaaacacgtctattatccagccttgccgagtcatccggaatatcaccttgcaaagaaacaaatgactggctttggtggtgtggtcagttttgaggttgatggagacctcctaactactgcaaaatttgtggatgctctgaggattccttatattgctccatcgtttggaggttgtgagagcattgtggaccaaccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgtttcacctgcaacgattttttccttttccttttcatcctgatttcgttgttcgtacttgtgttattgctgacttccatcacgtatccaattgtttgaacctaattaaaggatcatctagtagatgattcagtccattaaattatttcatgtcgtgttccttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="114496" stop="112560"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114431" g_stop="114349" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="93" r_length="83" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="114348" i_stop="113617" i_length="732">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.659" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113616" g_stop="113521" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="189" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89">
            <donor d_prob="0.628" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113431" g_stop="113313" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="308" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="113154" g_stop="112861" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="598" r_length="290" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="599" polyA_stop="609"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E693045" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E693045" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114431" e_stop="114349"/>
          <exon e_start="113616" e_stop="113521"/>
          <exon e_start="113431" e_stop="113313"/>
          <exon e_start="113154" e_stop="112861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATGAAGACGCTGCATCTTCGTGTACAGCAACAAAATTCTACTGCATTGAGGATGGCCGAAATTTTAGAGGCTCATCCCAAGGTACTCTAGGCTTCAATAGCTTTGTTAGTCATGATTTGAAATTCACATTTTACTAGAGCACAATTACCTTATTAATATGCATGATAATTCATGTTTATGTAAAAGTAAGAATGTTCAACTTGATGTTTGTTAGAGTAAGTGAAAATAAAGCGCTGAAAGCAACTTAAGAAGAAGATGCAGTCATTATTAGTTTAAAATAAGTAGAAGAAGATGCACCATCAATATGGGTGATCTTTTAAGCCAGATAAACTGAACGATCTTTTCTATCACTCCTTTGTACCCGTAGATTCTGCTGTTAACATCACAAAGCTGTACTTTTTGGGTGATTCTGTTTTTTCTTTCCTTCATCACTTAACAAAGACTATTCTTACATCCGTGGTTGCTACTTTGGTGTGCTTCCTAGTCGTCCTCTACTACAACATGCAGACTCACTAAGACAAATAGGTTGTAAACAAGTAAACATTCTTAAAGTGTTGATTAGTATCGTCTTAACTCTATAAAAAATTTCTATGTTACTTGTACAGTTACACTCCCTGTACGACCTACCTTTAGTCAGGTAGCTACTTCATCCTAATAATGCATGATTGACTCATTACTGAACATAAATTTACTATCGTACCACACTTCTAGCTTATCTATGAGCAGTAGCATTAAAGTTCAGAGGTCTTGTTTTTCCTGCGTTTCATTAGGATCTCTGCAAGTGCTGTCATATCTGAATAAAATGAGTTGCAGGTGAAACACGTCTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAGGTCTGTAGATCTATGGTCTTTTTTTAGCCAGGAATCCCTGTCAGTTCTCTCGCTTTCAGTATATTAAAGGGCTATATTTTTTCTATAAGGTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTTCTTA</genome_strand>
        <mrna_strand>GCATGAAGACGCTGCATCTTCGTGTACAGCACCAAAATTCTACTGCATTGAGGATGGCCGAAATTTTAGAGGCTCATCCCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAACACGTCTATTATCCAGCCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAG.........................................................................................GTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTA-G--GCTGTTTCACCTGCAACGA-TTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCACGTATCCAATTGTTTGAACCTAATTAAAGGATCATCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTCCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E365496" ref_strand="-" ref_description="SGN-E365496 [cLPT-2-D16]">
      <seq>ttttagaggctcatcccaaggtgaaacacgtttattatccaggcttaccaagtcatccggaatatcatcttgcaaagaaacaaatgactggctttggaggtgtggtcagttttgaggttgatggtgacctcctaactactgcaaaatttgtggatgctctgaggattccttatattgctccatcgtttggaggttgtgagagcattgtggaccaaccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtacgggatcttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgctgtttcacctgcaacgattttttccttttccttttcatcctgatttcgttgttcgtacttgtgttattgctgacttctatcacgtatccaattgtttgaaccttattgaaggatcatctagtagatgattcagtccattaaattatttcatgtcgtgttccttaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="113926" stop="112560"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113616" g_stop="113521" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="116" r_length="96" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89">
            <donor d_prob="0.628" d_score="0.96"/>
            <acceptor a_prob="0.864" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113431" g_stop="113313" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="235" r_length="119" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113154" g_stop="112861" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="528" r_length="293" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="529" polyA_stop="550"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E365496" ref_strand="-">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E365496" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="113616" e_stop="113521"/>
          <exon e_start="113431" e_stop="113313"/>
          <exon e_start="113154" e_stop="112861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAACACGTCTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAGGTCTGTAGATCTATGGTCTTTTTTTAGCCAGGAATCCCTGTCAGTTCTCTCGCTTTCAGTATATTAAAGGGCTATATTTTTTCTATAAGGTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTTCTTA</genome_strand>
        <mrna_strand>GTGAAACACGTTTATTATCCAGGCTTACCAAGTCATCCGGAATATCATCTTGCAAAGAAACAAATGACTGGCTTTGGAGGTGTGGTCAGTTTTGAG.........................................................................................GTTGATGGTGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTACGGGATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGA-TTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCTATCACGTATCCAATTGTTTGAACCTTATTGAAGGATCATCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTCCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E313424" ref_strand="-" ref_description="SGN-E313424 [cTOA-13-G22]">
      <seq>ctcatcccaaggtgaaacacgtttattatccaggcttgccgagtcatccggaatatcaccttgcaaagaaacaaatggctggctttggtggtgtggtcagttttgaggttgatggagccctcctaactactgcaaaatttgtggatgctctgaggattccttatattgctccatcgtttggaggttgtgacagcattgtggaccaaccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgctgtttcacttgcaacgatttttttccttttccttttcatcatgatttcgttgtttgtacttgtgttattgctgacttccatctggtatccaattgtttgaacctaattaaaggatcgtctagtagatgattcagtccattaaatcatttcatgtcgtgtttcttacccaaaaaaaccaaaaaaaaactgagactagatctctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="113926" stop="112561"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113616" g_stop="113521" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="107" r_length="96" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89">
            <donor d_prob="0.628" d_score="0.98"/>
            <acceptor a_prob="0.864" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113431" g_stop="113313" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="226" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="0.98"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113154" g_stop="112861" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="520" r_length="294" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E313424" ref_strand="-">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="0.911" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E313424" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="113616" e_stop="113521"/>
          <exon e_start="113431" e_stop="113313"/>
          <exon e_start="113154" e_stop="112861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAACACGTCTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAGGTCTGTAGATCTATGGTCTTTTTTTAGCCAGGAATCCCTGTCAGTTCTCTCGCTTTCAGTATATTAAAGGGCTATATTTTTTCTATAAGGTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTTCTTA</genome_strand>
        <mrna_strand>GTGAAACACGTTTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGGCTGGCTTTGGTGGTGTGGTCAGTTTTGAG.........................................................................................GTTGATGGAGCCCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGACAGCATTGTGGACCAACCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACTTGCAACGATTTTTTTCCTTTTCCTTTTCATCATGATTTCGTTGTTTGTACTTGTGTTATTGCTGACTTCCATCTGGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATCATTTCATGTCGTGTTTCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E365668" ref_strand="-" ref_description="SGN-E365668 [cLPT-8-C7]">
      <seq>atgactggctttggaggtgtggtcagttttgaggttgatggtgacctcctaactactgcaaaatttgtggatgctctgaggattccttatattgctccatcgtttggaggttgtgagagcattgtggaccaaccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtacgggatcttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgctgtttcacctgcaacgattttttccttttccttttcatcctgatttcgttgttcgtacttgtgttattgctgacttctatcacgtatccaattgtttgaaccttattgaaggatcatctagtagatgattcagtccattaaattatttcatgtcgtgttccttaaaaaaaaaacctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="113853" stop="112560"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113553" g_stop="113521" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="33" r_length="33" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89">
            <donor d_prob="0.628" d_score="0.00"/>
            <acceptor a_prob="0.864" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113431" g_stop="113313" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="34" r_stop="152" r_length="119" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113154" g_stop="112861" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="445" r_length="293" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E365668" ref_strand="-">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>446</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E365668" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="113553" e_stop="113521"/>
          <exon e_start="113431" e_stop="113313"/>
          <exon e_start="113154" e_stop="112861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAGGTCTGTAGATCTATGGTCTTTTTTTAGCCAGGAATCCCTGTCAGTTCTCTCGCTTTCAGTATATTAAAGGGCTATATTTTTTCTATAAGGTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTTCTTA</genome_strand>
        <mrna_strand>ATGACTGGCTTTGGAGGTGTGGTCAGTTTTGAG.........................................................................................GTTGATGGTGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTACGGGATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGA-TTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCTATCACGTATCCAATTGTTTGAACCTTATTGAAGGATCATCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTCCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E222785" ref_strand="+" ref_description="SGN-E222785 [cLEL-16-G9](-)">
      <seq>aaaatttgtggatgctctgaggattccttatattgctccatcgtttgaaggttgtgagagcattgtggaccaanccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgctgtttcacctgcaacgatttttttccttttccttttcatcctgatttcgttgttcgtacttgtgttattgctgacttccatctcgtatccaattgtttgaacctaattaaaggatcgtctagtagatgattcagtccattaaattatttcatgtcgtgtttcttaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="113705" stop="112560"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113405" g_stop="113313" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="0.94"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113154" g_stop="112861" g_length="294"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="388" r_length="294" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="389" polyA_stop="408"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E222785" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>387</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113405" e_stop="113313"/>
          <exon e_start="113154" e_stop="112861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAA-CCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTTCTTA</genome_strand>
        <mrna_strand>AAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGAAGGTTGTGAGAGCATTGTGGACCAANCCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTTCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E283335" ref_strand="+" ref_description="SGN-E283335 [cLER-12-P22]">
      <seq>aaattttagaggctcatcccaaggtgaaacacgtctattatccaggcttgccgagtcatccggaatatcaccttgcaaagaaacaaatgactggctttggtggtgtggtcagttttgaggttgatggagacctcctaactactgcaaaatttgtggatgctctgaggattccttatattgctccatcgtttggaggttgtgagagcattgtggaccaaccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgctgtttcacctgcaacgatttttttccttttccttttcatcctgatttcgatgttcgtacttgtgttattgctgacttccatctcgtatccaattgtttgaacctaattaaaggatcgtctagtagatgattcagtccattaaattatttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="114496" stop="112575"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114371" g_stop="114349" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="114348" i_stop="113617" i_length="732">
            <donor d_prob="0.988" d_score="0.00"/>
            <acceptor a_prob="0.659" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113616" g_stop="113521" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="119" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89">
            <donor d_prob="0.628" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113431" g_stop="113313" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="238" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="113154" g_stop="112876" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="517" r_length="279" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="518" polyA_stop="527"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E283335" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E283335" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114371" e_stop="114349"/>
          <exon e_start="113616" e_stop="113521"/>
          <exon e_start="113431" e_stop="113313"/>
          <exon e_start="113154" e_stop="112876"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTTTAGAGGCTCATCCCAAGGTACTCTAGGCTTCAATAGCTTTGTTAGTCATGATTTGAAATTCACATTTTACTAGAGCACAATTACCTTATTAATATGCATGATAATTCATGTTTATGTAAAAGTAAGAATGTTCAACTTGATGTTTGTTAGAGTAAGTGAAAATAAAGCGCTGAAAGCAACTTAAGAAGAAGATGCAGTCATTATTAGTTTAAAATAAGTAGAAGAAGATGCACCATCAATATGGGTGATCTTTTAAGCCAGATAAACTGAACGATCTTTTCTATCACTCCTTTGTACCCGTAGATTCTGCTGTTAACATCACAAAGCTGTACTTTTTGGGTGATTCTGTTTTTTCTTTCCTTCATCACTTAACAAAGACTATTCTTACATCCGTGGTTGCTACTTTGGTGTGCTTCCTAGTCGTCCTCTACTACAACATGCAGACTCACTAAGACAAATAGGTTGTAAACAAGTAAACATTCTTAAAGTGTTGATTAGTATCGTCTTAACTCTATAAAAAATTTCTATGTTACTTGTACAGTTACACTCCCTGTACGACCTACCTTTAGTCAGGTAGCTACTTCATCCTAATAATGCATGATTGACTCATTACTGAACATAAATTTACTATCGTACCACACTTCTAGCTTATCTATGAGCAGTAGCATTAAAGTTCAGAGGTCTTGTTTTTCCTGCGTTTCATTAGGATCTCTGCAAGTGCTGTCATATCTGAATAAAATGAGTTGCAGGTGAAACACGTCTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAGGTCTGTAGATCTATGGTCTTTTTTTAGCCAGGAATCCCTGTCAGTTCTCTCGCTTTCAGTATATTAAAGGGCTATATTTTTTCTATAAGGTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTC</genome_strand>
        <mrna_strand>AAATTTTAGAGGCTCATCCCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAACACGTCTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAG.........................................................................................GTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGATGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E221687" ref_strand="+" ref_description="SGN-E221687 [cLEL-10-F17](-)">
      <seq>cagttttgaggttgatggagacctcctaactactgcaaaatttgtggatgctctgaggattccttatattgctccatcgtttggaggttgtgagagcattgtggaccaacccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgctgtttcacctgcaacgatttttttccttttccttttcatcctgatttcgttgttcgtacttgtgttattgctgacttccatctcgtatccaattgtttgaacctaattaaaggatcgtctagtagatgattcagtccattaaattatttcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="113740" stop="112575"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113530" g_stop="113521" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="10" r_length="10" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89">
            <donor d_prob="0.628" d_score="0.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113431" g_stop="113313" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="130" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="0.96"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113154" g_stop="112876" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="409" r_length="279" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="410" polyA_stop="426"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E221687" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E221687" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113530" e_stop="113521"/>
          <exon e_start="113431" e_stop="113313"/>
          <exon e_start="113154" e_stop="112876"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTTTTGAGGTCTGTAGATCTATGGTCTTTTTTTAGCCAGGAATCCCTGTCAGTTCTCTCGCTTTCAGTATATTAAAGGGCTATATTTTTTCTATAAGGTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAA-CCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTC</genome_strand>
        <mrna_strand>CAGTTTTGAG.........................................................................................GTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E221762" ref_strand="+" ref_description="SGN-E221762 [cLEL-10-F17](-)">
      <seq>tgtggatgctctgaggattccttatattgctcccatcgtttggaggttgtgagagcattgtggaccaacccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgctgtttcacctgcaacgatttttttccttttccttttcatcctgatttcgttgttcgtacttgtgttattgctgacttccatctcgtatccaattgtttgaacctaattaaaggatcgtctagtagatgattcagtccattaaattatttcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="113699" stop="112575"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113399" g_stop="113313" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="0.96"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113154" g_stop="112876" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="368" r_length="279" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="369" polyA_stop="385"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E221762" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>366</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E221762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113399" e_stop="113313"/>
          <exon e_start="113154" e_stop="112876"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGGATGCTCTGAGGATTCCTTATATTGCT-CCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAA-CCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTC</genome_strand>
        <mrna_strand>TGTGGATGCTCTGAGGATTCCTTATATTGCTCCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E350353" ref_strand="+" ref_description="SGN-E350353 [cTOS-5-E20]">
      <seq>actactgcaaaatttgtggatgctctgaggattccttatattgctccatcgtttggaggttgtgagagcattgtggaccaaccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgctgtttcacctgcaacgatttttttccttttccttttcatcctgatttcgttgttcgtacttgtgttattgctgacttccatctcgtatccaattgtttgaacctaattaaaggatcgtctagtagatgattcagtccaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="113713" stop="112583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113413" g_stop="113313" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113154" g_stop="112878" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="378" r_length="277" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E350353" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>378</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E350353" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113413" e_stop="113313"/>
          <exon e_start="113154" e_stop="112878"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATT</genome_strand>
        <mrna_strand>ACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E222960" ref_strand="+" ref_description="SGN-E222960 [cLEL-14-O3](-)">
      <seq>tggtgtggtcagttttaaggttgatgaagacctcctaactactgcaaaatttgtggatgctctgaggattccttatattgctccatcgtttggaggttgtgagagcattgtggaccaaccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaaggttttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgctgtttcacctgcaacgatttttttccttttccttttcatcctgatttcgttgttcgtacttgtgttattgctgacttccatctcgtatccaattgtttgaacctaattaaaggatcgtctagtagatgattcagtccattaaattaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="113839" stop="112580"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113539" g_stop="113521" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89">
            <donor d_prob="0.628" d_score="0.00"/>
            <acceptor a_prob="0.864" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113431" g_stop="113313" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="138" r_length="119" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113154" g_stop="112881" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="412" r_length="274" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="413" polyA_stop="431"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E222960" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>412</cumulative_length_of_scored_exons>
        <coverage percentage="0.956" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113539" e_stop="113521"/>
          <exon e_start="113431" e_stop="113313"/>
          <exon e_start="113154" e_stop="112881"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGTGGTCAGTTTTGAGGTCTGTAGATCTATGGTCTTTTTTTAGCCAGGAATCCCTGTCAGTTCTCTCGCTTTCAGTATATTAAAGGGCTATATTTTTTCTATAAGGTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATT</genome_strand>
        <mrna_strand>TGGTGTGGTCAGTTTTAAG.........................................................................................GTTGATGAAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGGTTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E232486" ref_strand="+" ref_description="SGN-E232486 [cLEL-5-P4](-)">
      <seq>ggtgtggtcagttttgaggttgatggagacctcctaactactgcaaaatttgtggatgctctgaggattccttatattgctccatcgtttggaggttgtgagagcattgtggaccaaccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgctgtttcacctgcaacgatttttttccttttccttttcatcctgatttcgttgttcgtacttgtgttattgctgacttccatctcgtatccaattgtttgaacctaattaaaggatcgtctagtagatgattcagtccattaaattaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="113838" stop="112580"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113538" g_stop="113521" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="18" r_length="18" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89">
            <donor d_prob="0.628" d_score="0.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113431" g_stop="113313" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="137" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113154" g_stop="112881" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="411" r_length="274" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="412" polyA_stop="428"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E232486" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>411</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E232486" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113538" e_stop="113521"/>
          <exon e_start="113431" e_stop="113313"/>
          <exon e_start="113154" e_stop="112881"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGTGGTCAGTTTTGAGGTCTGTAGATCTATGGTCTTTTTTTAGCCAGGAATCCCTGTCAGTTCTCTCGCTTTCAGTATATTAAAGGGCTATATTTTTTCTATAAGGTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATT</genome_strand>
        <mrna_strand>GGTGTGGTCAGTTTTGAG.........................................................................................GTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E223484" ref_strand="+" ref_description="SGN-E223484 [cLEL-14-O3](-)">
      <seq>tgctctgaggattccttatattgctccatcgtttgaaggttgtgaaagcattgtggaccaaccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaaggttttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgctgtttcacctgcaacgatttttttccttttccttttcatcctgatttcgttgttcgtacatgtgttattgctaacttccatctcgtatccaattgtttgaacctaattaaaggatcgtctagtagatgattcagtccattaaattaaaaaaaaaaaaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="113693" stop="112580"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113393" g_stop="113313" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="0.96"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113154" g_stop="112881" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="355" r_length="274" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="356" polyA_stop="376"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E223484" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>355</cumulative_length_of_scored_exons>
        <coverage percentage="0.944" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E223484" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113393" e_stop="113313"/>
          <exon e_start="113154" e_stop="112881"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATT</genome_strand>
        <mrna_strand>TGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGAAGGTTGTGAAAGCATTGTGGACCAACCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGGTTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACATGTGTTATTGCTAACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E223305" ref_strand="+" ref_description="SGN-E223305 [cLEL-14-A13](-)">
      <seq>agtcatccggaatatcaccttgcaaagaaacaaatgactggctttggtggtgtggtcagttttgaggttgatggagacctccttactactgcaaaatttgtggatgctctgaggattccttatattgctccatcgtttggaggttgtgagagcattgtggaccaaccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgctgtttcacctgcaacgatttttttccttttccttttcatcctgatttcgttgttcgtacttgtgttattgctgacttccatctcgtatccaattgtttgaacctaattaaaggatcgtctagtagatgattcagtccaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="113886" stop="112583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113586" g_stop="113521" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89">
            <donor d_prob="0.628" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113431" g_stop="113313" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="185" r_length="119" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113154" g_stop="112889" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="451" r_length="266" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="452" polyA_stop="473"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E223305" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>451</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E223305" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113586" e_stop="113521"/>
          <exon e_start="113431" e_stop="113313"/>
          <exon e_start="113154" e_stop="112889"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAGGTCTGTAGATCTATGGTCTTTTTTTAGCCAGGAATCCCTGTCAGTTCTCTCGCTTTCAGTATATTAAAGGGCTATATTTTTTCTATAAGGTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCC</genome_strand>
        <mrna_strand>AGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAG.........................................................................................GTTGATGGAGACCTCCTTACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E222968" ref_strand="+" ref_description="SGN-E222968 [cLEL-14-A13](-)">
      <seq>tggtgtggtcagttttaaggttgatggagacctcctaactactgcaaaatttgtggatgctctgaggattccttatattgctccatcgtttgaaggttgtgagagcattgtggaccaaccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgctgtttcacctgcaacgatttttttccttttccttttcatcctgatttcgttgttcgtacttgtgttattgctgacttccatctcgtatccaattgtttgaacctaattaaaggatcgtctagtagatgattcagtccaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="113839" stop="112583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113539" g_stop="113521" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="19" r_length="19" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89">
            <donor d_prob="0.628" d_score="0.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113431" g_stop="113313" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="138" r_length="119" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="0.98"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113154" g_stop="112889" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="404" r_length="266" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="405" polyA_stop="426"/>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E222968" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E222968" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113539" e_stop="113521"/>
          <exon e_start="113431" e_stop="113313"/>
          <exon e_start="113154" e_stop="112889"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTGTGGTCAGTTTTGAGGTCTGTAGATCTATGGTCTTTTTTTAGCCAGGAATCCCTGTCAGTTCTCTCGCTTTCAGTATATTAAAGGGCTATATTTTTTCTATAAGGTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCC</genome_strand>
        <mrna_strand>TGGTGTGGTCAGTTTTAAG.........................................................................................GTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGAAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E280925" ref_strand="+" ref_description="SGN-E280925 [cLEL-6-L12](-)">
      <seq>aataatgtcttattgggatcttagccagtctgatagagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaagctgatgttcttcaggctttggattccatttaggctgctgtttcaccgacaacgatttttttcctaatcctcctcatcctgatttcgttgttcgtacatgtgttattgctgacttcctcgtgccgaattctttggatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="113627" stop="112629"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="113327" g_stop="113313" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="0.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113154" g_stop="112947" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="223" r_length="208" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E280925" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>223</cumulative_length_of_scored_exons>
        <coverage percentage="0.910" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E280925" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="113327" e_stop="113313"/>
          <exon e_start="113154" e_stop="112947"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCC</genome_strand>
        <mrna_strand>AATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCGACAACGATTTTTTTCCTAATCCTCCTCATCCTGATTTCGTTGTTCGTACATGTGTTATTGCTGACTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E251508" ref_strand="+" ref_description="SGN-E251508 [cLEG-9-E7]">
      <seq>tcttgcaggttgtattagtggtcctgaaaaattagtttcagtaatccaaaacttgcatcatatcctgggtggtgctctcaatcctaatgctgcatatcttatcatccgaggcatgaagacgctgcatcttcgtgtacagcaacaaaattctactgcattgaggatggccgaaattttagaggctcatcccaaggtgaaacacgtctattatccaggcttgccgagtcatccggaatatcaccttgcaaagaaacaaatgactggctttggtggtgtggtcagttttgaggttgatggagacctcctaactactgcaaaatttgtggatgctctgaggattccttatattgctccatcgtttggaggttgtgagagcattgtggaccaaccagcaataatgtcttattgggatcttagccagtctgatagagcaaagtatggcatcttggataacttggtccgatttagctttggagtggaagattttgaagatgtgaaagctgatgttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0280E02-TYinW/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0280E02.2" temp_strand="-" temp_description="C02HBa0280E02.2  AC215433.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0280E02 sequenced_by:kribb upload_account_name:korea">
        <position start="114496" stop="112752"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114496" g_stop="114349" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="193" r_length="144" r_score="0.851"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="114348" i_stop="113617" i_length="732">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.659" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="113616" g_stop="113521" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="289" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89">
            <donor d_prob="0.628" d_score="1.00"/>
            <acceptor a_prob="0.864" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="113431" g_stop="113313" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="408" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="113154" g_stop="113052" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="511" r_length="103" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0280E02.2" gen_strand="-" ref_id="SGN-E251508" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="0.912" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0280E02.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E251508" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114496" e_stop="114349"/>
          <exon e_start="113616" e_stop="113521"/>
          <exon e_start="113431" e_stop="113313"/>
          <exon e_start="113154" e_stop="113052"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATTTTATAGAAGTCTGATGCAATTTTCCCAACTGCCAGAATGCTGCATATCTTATCATCCGAGGCATGAAGACGCTGCATCTTCGTGTACAGCAACAAAATTCTACTGCATTGAGGATGGCCGAAATTTTAGAGGCTCATCCCAAGGTACTCTAGGCTTCAATAGCTTTGTTAGTCATGATTTGAAATTCACATTTTACTAGAGCACAATTACCTTATTAATATGCATGATAATTCATGTTTATGTAAAAGTAAGAATGTTCAACTTGATGTTTGTTAGAGTAAGTGAAAATAAAGCGCTGAAAGCAACTTAAGAAGAAGATGCAGTCATTATTAGTTTAAAATAAGTAGAAGAAGATGCACCATCAATATGGGTGATCTTTTAAGCCAGATAAACTGAACGATCTTTTCTATCACTCCTTTGTACCCGTAGATTCTGCTGTTAACATCACAAAGCTGTACTTTTTGGGTGATTCTGTTTTTTCTTTCCTTCATCACTTAACAAAGACTATTCTTACATCCGTGGTTGCTACTTTGGTGTGCTTCCTAGTCGTCCTCTACTACAACATGCAGACTCACTAAGACAAATAGGTTGTAAACAAGTAAACATTCTTAAAGTGTTGATTAGTATCGTCTTAACTCTATAAAAAATTTCTATGTTACTTGTACAGTTACACTCCCTGTACGACCTACCTTTAGTCAGGTAGCTACTTCATCCTAATAATGCATGATTGACTCATTACTGAACATAAATTTACTATCGTACCACACTTCTAGCTTATCTATGAGCAGTAGCATTAAAGTTCAGAGGTCTTGTTTTTCCTGCGTTTCATTAGGATCTCTGCAAGTGCTGTCATATCTGAATAAAATGAGTTGCAGGTGAAACACGTCTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAGGTCTGTAGATCTATGGTCTTTTTTTAGCCAGGAATCCCTGTCAGTTCTCTCGCTTTCAGTATATTAAAGGGCTATATTTTTTCTATAAGGTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTGGTATGTCAATGTTCTATTTCATGGTTACTTATCAATAAAGTATACTCTATTATGGGGAGAGAATCTGGAAACTATAACTTTTCTATCAACACTACTAACATATCGAGTGCTAAATGAAAACATTGTGGATAACATGCTCGATTTGAACTGTAAAACAGGGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTT</genome_strand>
        <mrna_strand>AACTTGCATCATATCCTG-GGTGGTGCTCTCAA-T-CC-TAATGCTGCATATCTTATCATCCGAGGCATGAAGACGCTGCATCTTCGTGTACAGCAACAAAATTCTACTGCATTGAGGATGGCCGAAATTTTAGAGGCTCATCCCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAACACGTCTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAG.........................................................................................GTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTG..............................................................................................................................................................GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>130</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="5814" PGL_stop="5248"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5814" e_stop="5248"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="5814" e_stop="5248" e_length="567"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5814" stop="5248"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296334" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAAATTGGTGCTGTTTTGGCCGTTATGAGGAGAAATGTAAGGTGGGGGTTCCATTATGCTGCTGCTGATGATCAGCTAGAGCATCCTCTCATACATTCTTTCAAGGAATTACGGAAAAATGTCTTCTCATGGAAACATCACTGGAACAGAGTTGATCCACTCCTATATCTTCAGCCTTTCTTGGATGTGATTCAATCTGATGAAACTGGTGCACCAATAACCGGTGTTGCACTGTCTTCTGTTTACAAATTCTTAACCCTTGAAATAATTGATTCATCTATCATGAATGTGGAGAAAGCTTTATATCAGATAGTTGAGACCGTGACAAGTTGCCGCTTTGAAGTGACTGATCCTGCCTCTGAGGAAGTGGTACTGATGAAGATACTTCAGGTTCTTTTGGCTTGCATGAAAAGTAAGGCATCAGAAAATTTAAGTAATCATCACGTGTGCAACATTGTAAACACTTGCTTTCGGCTTGTTCATCAAGCTAGTGCCAAAAGTGAACTGCTGCAGAGAATAGCAAGACACACAATGCATGAATTGGTGAGACACATTTTCGCTCACCT</gDNA_template>
            <first_frame> R  N  W  C  C  F  G  R  Y  E  E  K  C  K  V  G  V  P  L  C  C  C  *  *  S  A  R  A  S  S  H  T  F  F  Q  G  I  T  E  K  C  L  L  M  E  T  S  L  E  Q  S  *  S  T  P  I  S  S  A  F  L  G  C  D  S  I  *  *  N  W  C  T  N  N  R  C  C  T  V  F  C  L  Q  I  L  N  P  *  N  N  *  F  I  Y  H  E  C  G  E  S  F  I  S  D  S  *  D  R  D  K  L  P  L  *  S  D  *  S  C  L  *  G  S  G  T  D  E  D  T  S  G  S  F  G  L  H  E  K  *  G  I  R  K  F  K  *  S  S  R  V  Q  H  C  K  H  L  L  S  A  C  S  S  S  *  C  Q  K  *  T  A  A  E  N  S  K  T  H  N  A  *  I  G  E  T  H  F  R  S  P </first_frame>
            <second_frame>  E  I  G  A  V  L  A  V  M  R  R  N  V  R  W  G  F  H  Y  A  A  A  D  D  Q  L  E  H  P  L  I  H  S  F  K  E  L  R  K  N  V  F  S  W  K  H  H  W  N  R  V  D  P  L  L  Y  L  Q  P  F  L  D  V  I  Q  S  D  E  T  G  A  P  I  T  G  V  A  L  S  S  V  Y  K  F  L  T  L  E  I  I  D  S  S  I  M  N  V  E  K  A  L  Y  Q  I  V  E  T  V  T  S  C  R  F  E  V  T  D  P  A  S  E  E  V  V  L  M  K  I  L  Q  V  L  L  A  C  M  K  S  K  A  S  E  N  L  S  N  H  H  V  C  N  I  V  N  T  C  F  R  L  V  H  Q  A  S  A  K  S  E  L  L  Q  R  I  A  R  H  T  M  H  E  L  V  R  H  I  F  A  H   </second_frame>
            <third_frame>   K  L  V  L  F  W  P  L  *  G  E  M  *  G  G  G  S  I  M  L  L  L  M  I  S  *  S  I  L  S  Y  I  L  S  R  N  Y  G  K  M  S  S  H  G  N  I  T  G  T  E  L  I  H  S  Y  I  F  S  L  S  W  M  *  F  N  L  M  K  L  V  H  Q  *  P  V  L  H  C  L  L  F  T  N  S  *  P  L  K  *  L  I  H  L  S  *  M  W  R  K  L  Y  I  R  *  L  R  P  *  Q  V  A  A  L  K  *  L  I  L  P  L  R  K  W  Y  *  *  R  Y  F  R  F  F  W  L  A  *  K  V  R  H  Q  K  I  *  V  I  I  T  C  A  T  L  *  T  L  A  F  G  L  F  I  K  L  V  P  K  V  N  C  C  R  E  *  Q  D  T  Q  C  M  N  W  *  D  T  F  S  L  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5813" stop="5250"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>564</number_coding_nucleotides>
                  <number_encoded_amino_acids>188</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EIGAVLAVMRRNVRWGFHYAAADDQLEHPLIHSFKELRKNVFSWKHHWNRVDPLLYLQPFLDVIQSDETGAPITGVALSSVYKFLTLEIIDSSIMNVEKALYQIVETVTSCRFEVTDPASEEVVLMKILQVLLACMKSKASENLSNHHVCNIVNTCFRLVHQASAKSELLQRIARHTMHELVRHIFAH</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="22872" PGL_stop="10974"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="22872" e_stop="22845"/>
            <exon e_start="20931" e_stop="20738"/>
            <exon e_start="20188" e_stop="20004"/>
            <exon e_start="19915" e_stop="19733"/>
            <exon e_start="16606" e_stop="16475"/>
            <exon e_start="15880" e_stop="15695"/>
            <exon e_start="13461" e_stop="13372"/>
            <exon e_start="13300" e_stop="13217"/>
            <exon e_start="12989" e_stop="12852"/>
            <exon e_start="12429" e_stop="12187"/>
            <exon e_start="11440" e_stop="10974"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.949" acc_prob="1.000" e_score="0.750"/>
          <exon-intron don_prob="0.000" acc_prob="0.920" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.934" e_score="1.000"/>
          <exon-intron don_prob="0.906" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.930" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.936" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.750">
            <gDNA_exon_boundary e_start="22872" e_stop="22845" e_length="28"/>
          </exon>
          <intron i_serial="1" don_prob="0.949" acc_prob="1.000">
            <gDNA_intron_boundary i_start="22844" i_stop="20932" i_length="1913"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="20931" e_stop="20738" e_length="194"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.920">
            <gDNA_intron_boundary i_start="20737" i_stop="20189" i_length="549"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="20188" e_stop="20004" e_length="185"/>
          </exon>
          <intron i_serial="3" don_prob="0.964" acc_prob="0.934">
            <gDNA_intron_boundary i_start="20003" i_stop="19916" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19915" e_stop="19733" e_length="183"/>
          </exon>
          <intron i_serial="4" don_prob="0.906" acc_prob="0.998">
            <gDNA_intron_boundary i_start="19732" i_stop="16607" i_length="3126"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="16606" e_stop="16475" e_length="132"/>
          </exon>
          <intron i_serial="5" don_prob="0.986" acc_prob="0.930">
            <gDNA_intron_boundary i_start="16474" i_stop="15881" i_length="594"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="15880" e_stop="15695" e_length="186"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.936">
            <gDNA_intron_boundary i_start="15694" i_stop="13462" i_length="2233"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="13461" e_stop="13372" e_length="90"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.983">
            <gDNA_intron_boundary i_start="13371" i_stop="13301" i_length="71"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="13300" e_stop="13217" e_length="84"/>
          </exon>
          <intron i_serial="8" don_prob="0.973" acc_prob="1.000">
            <gDNA_intron_boundary i_start="13216" i_stop="12990" i_length="227"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="12989" e_stop="12852" e_length="138"/>
          </exon>
          <intron i_serial="9" don_prob="0.998" acc_prob="0.993">
            <gDNA_intron_boundary i_start="12851" i_stop="12430" i_length="422"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="12429" e_stop="12187" e_length="243"/>
          </exon>
          <intron i_serial="10" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="12186" i_stop="11441" i_length="746"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="11440" e_stop="10974" e_length="467"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22872" stop="22845"/>
              <exon start="20931" stop="20738"/>
              <exon start="20188" stop="20004"/>
              <exon start="19915" stop="19733"/>
              <exon start="16606" stop="16475"/>
              <exon start="15880" stop="15695"/>
              <exon start="13461" stop="13372"/>
              <exon start="13300" stop="13217"/>
              <exon start="12989" stop="12852"/>
              <exon start="12429" stop="12187"/>
              <exon start="11440" stop="10974"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16522" stop="16475"/>
              <exon start="15880" stop="15695"/>
              <exon start="13461" stop="13372"/>
              <exon start="13300" stop="13217"/>
              <exon start="12989" stop="12852"/>
              <exon start="12429" stop="12195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697702" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12429" stop="12187"/>
              <exon start="11440" stop="11097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343856" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGATTCTGTGGAAGGAAAACATCAAAG : GAAAATGGACGGAACAGCAGTGCAGGGCACCAGCAGTGTTGACTCATTTTTACGGAACTATAAACTCGGGAAAACACTTGGCATTGGATCGTTCGGCAAAGTTAAAATAGCTGAACATACGTTAACAGGGCACAAAGTTGCTGTCAAGATTCTTAATCGTCGAAAAATCAGGAATATGGACATGGAGGAGAAAG : TCCGTAGAGAAATCAAAATATTGAGATTGTTCATGCATCCTCATATTATACGGCTTTATGAGGTCATAGAGACACCATCAGATATATATGTTGTGATGGAGTATGTGAAATCTGGCGAGTTATTTGATTACATTGTTGAGAAGGGCAGATTGCAGGAGGATGAAGCTCGTAACTTTTTTCAGCAG : ATAATTTCTGGTGTGGAGTACTGCCATAGAAACATGGTGGTTCATAGAGACCTTAAGCCTGAAAACCTCCTTCTGGACTCCAAATGGAATGTGAAGATCGCAGATTTTGGTTTGAGCAATATCATGCGCGATGGTCATTTTCTGAAGACAAGTTGCGGAAGCCCAAACTATGCTGCCCCAGAG : GTTATATCAGGTAAATTGTATGCTGGCCCTGAGGTAGATGTATGGAGCTGTGGTGTTATTCTTTATGCTCTTCTCTGTGGCACCCTTCCGTTTGACGATGAAAACATACCCAATCTTTTTAAGAAAATAAAG : GGTGGAATATATACTCTGCCCAGCCATTTATCAGCTGGTGCGAGGGATTTGATTCCGAGGATGCTTATAGTCGACCCAATGAAGCGAATGACTATTCCTGAGATTCGCCTGCACCCTTGGTTCCAAGCTCATTTGCCACGCTATTTGGCCGTGCCTCCACCAGATACAACCCAACAAGCAAAGAAG : ATCGATGAAGAGATTCTTCAAGAGGTGGTTAAGATGGGATTTGACAGGAACAACCTTACTGAGTCTCTTCGCAATAGAGTTCAAAATGAG : GGCACTGTTGCATACTATCTGCTCCTGGACAATCGCCATCGTGTTTCCACTGGCTATCTTGGAGCTGAATTTCAGGAGTCCATG : GAATATGGTTACAACCGGATCAATTCTAATGAAACCGCTGCTTCCCCTGTTGGTCAACGTTTCCCAGGAATAATGGATTATCAGCAAGCTGGTGCAAGACAGTTCCCCATTGAAAGAAAATGGGCTCTTGGCCTCCAG : TCTCGAGCGCATCCACGTGAAATAATGACTGAAGTTTTGAAAGCTCTGCAAGAACTGAATGTATGTTGGAAAAAGATTGGTCAGTATAACATGAAATGTCGATGGGTTCCTAGCTTACCTGGTCATCATGAAGGCATGGGTGTTAATTCCATGCATGGGAATCAGTTCTTTGGAGATGATTCATCCATCATTGAGAATGATGGGGCCACAAAGTTAACAAATGTGGTCAAGTTTGAAGTTCAG : CTTTACAAAACCAGGGAGGAGAAGTACTTGCTTGACCTTCAGAGACTTCAGGGTCCACAATTCCTCTTCCTGGATCTCTGTGCTGCTTTTCTTGCTCAGCTTCGAGTACTTTAAAGTCTCCGAAATAAGGAGCTAAGTTGGAAAAAGCCCATGCTTGTATATAATTGGTATACCAGCTCAGTTACTGCATTTTGTCTTGTTAACAAATTCCACCCTGCTTGGTCAGAGGTGCCTAGCAACTCTTTTTTTCTTTTGATTCGCTAGGAGATCTAGCTCACTCTCTTTTTTAACGTTTATGGAATTTCAGTTACCTACAGTATCTACTTACAGATTGAACTGCAAGATGAGCGCGATGTCTGTCTGTGACCCATTCCCTCTTCTCCCCTTATCGACGATCATTTGGAGTCCAACGAAGATTTTCTTGTGTCAAATTTGAAATGTTTGTCTGAATAAAAACAAGTCCCAAC</gDNA_template>
            <first_frame> Q  I  L  W  K  E  N  I  K   : G  K  W  T  E  Q  Q  C  R  A  P  A  V  L  T  H  F  Y  G  T  I  N  S  G  K  H  L  A  L  D  R  S  A  K  L  K  *  L  N  I  R  *  Q  G  T  K  L  L  S  R  F  L  I  V  E  K  S  G  I  W  T  W  R  R  K  :  S  V  E  K  S  K  Y  *  D  C  S  C  I  L  I  L  Y  G  F  M  R  S  *  R  H  H  Q  I  Y  M  L  *  W  S  M  *  N  L  A  S  Y  L  I  T  L  L  R  R  A  D  C  R  R  M  K  L  V  T  F  F  S  R :   *  F  L  V  W  S  T  A  I  E  T  W  W  F  I  E  T  L  S  L  K  T  S  F  W  T  P  N  G  M  *  R  S  Q  I  L  V  *  A  I  S  C  A  M  V  I  F  *  R  Q  V  A  E  A  Q  T  M  L  P  Q  R :   L  Y  Q  V  N  C  M  L  A  L  R  *  M  Y  G  A  V  V  L  F  F  M  L  F  S  V  A  P  F  R  L  T  M  K  T  Y  P  I  F  L  R  K  *  R :   V  E  Y  I  L  C  P  A  I  Y  Q  L  V  R  G  I  *  F  R  G  C  L  *  S  T  Q  *  S  E  *  L  F  L  R  F  A  C  T  L  G  S  K  L  I  C  H  A  I  W  P  C  L  H  Q  I  Q  P  N  K  Q  R  R :   S  M  K  R  F  F  K  R  W  L  R  W  D  L  T  G  T  T  L  L  S  L  F  A  I  E  F  K  M  R :   A  L  L  H  T  I  C  S  W  T  I  A  I  V  F  P  L  A  I  L  E  L  N  F  R  S  P  W :   N  M  V  T  T  G  S  I  L  M  K  P  L  L  P  L  L  V  N  V  S  Q  E  *  W  I  I  S  K  L  V  Q  D  S  S  P  L  K  E  N  G  L  L  A  S  S :   L  E  R  I  H  V  K  *  *  L  K  F  *  K  L  C  K  N  *  M  Y  V  G  K  R  L  V  S  I  T  *  N  V  D  G  F  L  A  Y  L  V  I  M  K  A  W  V  L  I  P  C  M  G  I  S  S  L  E  M  I  H  P  S  L  R  M  M  G  P  Q  S  *  Q  M  W  S  S  L  K  F  S :   F  T  K  P  G  R  R  S  T  C  L  T  F  R  D  F  R  V  H  N  S  S  S  W  I  S  V  L  L  F  L  L  S  F  E  Y  F  K  V  S  E  I  R  S  *  V  G  K  S  P  C  L  Y  I  I  G  I  P  A  Q  L  L  H  F  V  L  L  T  N  S  T  L  L  G  Q  R  C  L  A  T  L  F  F  F  *  F  A  R  R  S  S  S  L  S  F  L  T  F  M  E  F  Q  L  P  T  V  S  T  Y  R  L  N  C  K  M  S  A  M  S  V  C  D  P  F  P  L  L  P  L  S  T  I  I  W  S  P  T  K  I  F  L  C  Q  I  *  N  V  C  L  N  K  N  K  S  Q  </first_frame>
            <second_frame>  R  F  C  G  R  K  T  S  K  :  E  N  G  R  N  S  S  A  G  H  Q  Q  C  *  L  I  F  T  E  L  *  T  R  E  N  T  W  H  W  I  V  R  Q  S  *  N  S  *  T  Y  V  N  R  A  Q  S  C  C  Q  D  S  *  S  S  K  N  Q  E  Y  G  H  G  G  E  S :   P  *  R  N  Q  N  I  E  I  V  H  A  S  S  Y  Y  T  A  L  *  G  H  R  D  T  I  R  Y  I  C  C  D  G  V  C  E  I  W  R  V  I  *  L  H  C  *  E  G  Q  I  A  G  G  *  S  S  *  L  F  S  A   : D  N  F  W  C  G  V  L  P  *  K  H  G  G  S  *  R  P  *  A  *  K  P  P  S  G  L  Q  M  E  C  E  D  R  R  F  W  F  E  Q  Y  H  A  R  W  S  F  S  E  D  K  L  R  K  P  K  L  C  C  P  R   : G  Y  I  R  *  I  V  C  W  P  *  G  R  C  M  E  L  W  C  Y  S  L  C  S  S  L  W  H  P  S  V  *  R  *  K  H  T  Q  S  F  *  E  N  K   : G  W  N  I  Y  S  A  Q  P  F  I  S  W  C  E  G  F  D  S  E  D  A  Y  S  R  P  N  E  A  N  D  Y  S  *  D  S  P  A  P  L  V  P  S  S  F  A  T  L  F  G  R  A  S  T  R  Y  N  P  T  S  K  E   : D  R  *  R  D  S  S  R  G  G  *  D  G  I  *  Q  E  Q  P  Y  *  V  S  S  Q  *  S  S  K  *   : G  H  C  C  I  L  S  A  P  G  Q  S  P  S  C  F  H  W  L  S  W  S  *  I  S  G  V  H   : G  I  W  L  Q  P  D  Q  F  *  *  N  R  C  F  P  C  W  S  T  F  P  R  N  N  G  L  S  A  S  W  C  K  T  V  P  H  *  K  K  M  G  S  W  P  P   : V  S  S  A  S  T  *  N  N  D  *  S  F  E  S  S  A  R  T  E  C  M  L  E  K  D  W  S  V  *  H  E  M  S  M  G  S  *  L  T  W  S  S  *  R  H  G  C  *  F  H  A  W  E  S  V  L  W  R  *  F  I  H  H  *  E  *  W  G  H  K  V  N  K  C  G  Q  V  *  S  S   : A  L  Q  N  Q  G  G  E  V  L  A  *  P  S  E  T  S  G  S  T  I  P  L  P  G  S  L  C  C  F  S  C  S  A  S  S  T  L  K  S  P  K  *  G  A  K  L  E  K  A  H  A  C  I  *  L  V  Y  Q  L  S  Y  C  I  L  S  C  *  Q  I  P  P  C  L  V  R  G  A  *  Q  L  F  F  S  F  D  S  L  G  D  L  A  H  S  L  F  *  R  L  W  N  F  S  Y  L  Q  Y  L  L  T  D  *  T  A  R  *  A  R  C  L  S  V  T  H  S  L  F  S  P  Y  R  R  S  F  G  V  Q  R  R  F  S  C  V  K  F  E  M  F  V  *  I  K  T  S  P  N </second_frame>
            <third_frame>   D  S  V  E  G  K  H  Q  R :   K  M  D  G  T  A  V  Q  G  T  S  S  V  D  S  F  L  R  N  Y  K  L  G  K  T  L  G  I  G  S  F  G  K  V  K  I  A  E  H  T  L  T  G  H  K  V  A  V  K  I  L  N  R  R  K  I  R  N  M  D  M  E  E  K   : V  R  R  E  I  K  I  L  R  L  F  M  H  P  H  I  I  R  L  Y  E  V  I  E  T  P  S  D  I  Y  V  V  M  E  Y  V  K  S  G  E  L  F  D  Y  I  V  E  K  G  R  L  Q  E  D  E  A  R  N  F  F  Q  Q  :  I  I  S  G  V  E  Y  C  H  R  N  M  V  V  H  R  D  L  K  P  E  N  L  L  L  D  S  K  W  N  V  K  I  A  D  F  G  L  S  N  I  M  R  D  G  H  F  L  K  T  S  C  G  S  P  N  Y  A  A  P  E  :  V  I  S  G  K  L  Y  A  G  P  E  V  D  V  W  S  C  G  V  I  L  Y  A  L  L  C  G  T  L  P  F  D  D  E  N  I  P  N  L  F  K  K  I  K  :  G  G  I  Y  T  L  P  S  H  L  S  A  G  A  R  D  L  I  P  R  M  L  I  V  D  P  M  K  R  M  T  I  P  E  I  R  L  H  P  W  F  Q  A  H  L  P  R  Y  L  A  V  P  P  P  D  T  T  Q  Q  A  K  K  :  I  D  E  E  I  L  Q  E  V  V  K  M  G  F  D  R  N  N  L  T  E  S  L  R  N  R  V  Q  N  E  :  G  T  V  A  Y  Y  L  L  L  D  N  R  H  R  V  S  T  G  Y  L  G  A  E  F  Q  E  S  M  :  E  Y  G  Y  N  R  I  N  S  N  E  T  A  A  S  P  V  G  Q  R  F  P  G  I  M  D  Y  Q  Q  A  G  A  R  Q  F  P  I  E  R  K  W  A  L  G  L  Q  :  S  R  A  H  P  R  E  I  M  T  E  V  L  K  A  L  Q  E  L  N  V  C  W  K  K  I  G  Q  Y  N  M  K  C  R  W  V  P  S  L  P  G  H  H  E  G  M  G  V  N  S  M  H  G  N  Q  F  F  G  D  D  S  S  I  I  E  N  D  G  A  T  K  L  T  N  V  V  K  F  E  V  Q  :  L  Y  K  T  R  E  E  K  Y  L  L  D  L  Q  R  L  Q  G  P  Q  F  L  F  L  D  L  C  A  A  F  L  A  Q  L  R  V  L  *  S  L  R  N  K  E  L  S  W  K  K  P  M  L  V  Y  N  W  Y  T  S  S  V  T  A  F  C  L  V  N  K  F  H  P  A  W  S  E  V  P  S  N  S  F  F  L  L  I  R  *  E  I  *  L  T  L  F  F  N  V  Y  G  I  S  V  T  Y  S  I  Y  L  Q  I  E  L  Q  D  E  R  D  V  C  L  *  P  I  P  S  S  P  L  I  D  D  H  L  E  S  N  E  D  F  L  V  S  N  L  K  C  L  S  E  *  K  Q  V  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22870" stop="22845"/>
                    <exon start="20931" stop="20738"/>
                    <exon start="20188" stop="20004"/>
                    <exon start="19915" stop="19733"/>
                    <exon start="16606" stop="16475"/>
                    <exon start="15880" stop="15695"/>
                    <exon start="13461" stop="13372"/>
                    <exon start="13300" stop="13217"/>
                    <exon start="12989" stop="12852"/>
                    <exon start="12429" stop="12187"/>
                    <exon start="11440" stop="11327"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1572</number_coding_nucleotides>
                  <number_encoded_amino_acids>524</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DSVEGKHQRKMDGTAVQGTSSVDSFLRNYKLGKTLGIGSFGKVKIAEHTLTGHKVAVKILNRRKIRNMDMEEKVRREIKILRLFMHPHIIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSAGARDLIPRMLIVDPMKRMTIPEIRLHPWFQAHLPRYLAVPPPDTTQQAKKIDEEILQEVVKMGFDRNNLTESLRNRVQNEGTVAYYLLLDNRHRVSTGYLGAEFQESMEYGYNRINSNETAASPVGQRFPGIMDYQQAGARQFPIERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGQYNMKCRWVPSLPGHHEGMGVNSMHGNQFFGDDSSIIENDGATKLTNVVKFEVQLYKTREEKYLLDLQRLQGPQFLFLDLCAAFLAQLRVL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="22445" e_stop="22385"/>
            <exon e_start="20931" e_stop="20738"/>
            <exon e_start="20188" e_stop="20004"/>
            <exon e_start="19915" e_stop="19733"/>
            <exon e_start="16606" e_stop="16475"/>
            <exon e_start="15880" e_stop="15695"/>
            <exon e_start="13461" e_stop="13372"/>
            <exon e_start="13300" e_stop="13217"/>
            <exon e_start="12989" e_stop="12852"/>
            <exon e_start="12429" e_stop="12187"/>
            <exon e_start="11440" e_stop="11097"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.956" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.920" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.934" e_score="1.000"/>
          <exon-intron don_prob="0.906" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.930" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.936" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="0.996"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="22445" e_stop="22385" e_length="61"/>
          </exon>
          <intron i_serial="1" don_prob="0.956" acc_prob="1.000">
            <gDNA_intron_boundary i_start="22384" i_stop="20932" i_length="1453"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="20931" e_stop="20738" e_length="194"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.920">
            <gDNA_intron_boundary i_start="20737" i_stop="20189" i_length="549"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="20188" e_stop="20004" e_length="185"/>
          </exon>
          <intron i_serial="3" don_prob="0.964" acc_prob="0.934">
            <gDNA_intron_boundary i_start="20003" i_stop="19916" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19915" e_stop="19733" e_length="183"/>
          </exon>
          <intron i_serial="4" don_prob="0.906" acc_prob="0.998">
            <gDNA_intron_boundary i_start="19732" i_stop="16607" i_length="3126"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="16606" e_stop="16475" e_length="132"/>
          </exon>
          <intron i_serial="5" don_prob="0.986" acc_prob="0.930">
            <gDNA_intron_boundary i_start="16474" i_stop="15881" i_length="594"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="15880" e_stop="15695" e_length="186"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.936">
            <gDNA_intron_boundary i_start="15694" i_stop="13462" i_length="2233"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="13461" e_stop="13372" e_length="90"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.983">
            <gDNA_intron_boundary i_start="13371" i_stop="13301" i_length="71"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="13300" e_stop="13217" e_length="84"/>
          </exon>
          <intron i_serial="8" don_prob="0.973" acc_prob="1.000">
            <gDNA_intron_boundary i_start="13216" i_stop="12990" i_length="227"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="12989" e_stop="12852" e_length="138"/>
          </exon>
          <intron i_serial="9" don_prob="0.998" acc_prob="0.993">
            <gDNA_intron_boundary i_start="12851" i_stop="12430" i_length="422"/>
          </intron>
          <exon e_serial="10" e_score="0.996">
            <gDNA_exon_boundary e_start="12429" e_stop="12187" e_length="243"/>
          </exon>
          <intron i_serial="10" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="12186" i_stop="11441" i_length="746"/>
          </intron>
          <exon e_serial="11" e_score="0.983">
            <gDNA_exon_boundary e_start="11440" e_stop="11097" e_length="344"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22445" stop="22385"/>
              <exon start="20931" stop="20738"/>
              <exon start="20188" stop="20004"/>
              <exon start="19915" stop="19733"/>
              <exon start="16606" stop="16475"/>
              <exon start="15880" stop="15761"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E701694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16522" stop="16475"/>
              <exon start="15880" stop="15695"/>
              <exon start="13461" stop="13372"/>
              <exon start="13300" stop="13217"/>
              <exon start="12989" stop="12852"/>
              <exon start="12429" stop="12195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697702" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12429" stop="12187"/>
              <exon start="11440" stop="11097"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343856" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTTTCATATTTTGTTGTTGAATTTCTTCAATCTGCTTCTTGGGGTTTAGCTTCTGCCAG : GAAAATGGACGGAACAGCAGTGCAGGGCACCAGCAGTGTTGACTCATTTTTACGGAACTATAAACTCGGGAAAACACTTGGCATTGGATCGTTCGGCAAAGTTAAAATAGCTGAACATACGTTAACAGGGCACAAAGTTGCTGTCAAGATTCTTAATCGTCGAAAAATCAGGAATATGGACATGGAGGAGAAAG : TCCGTAGAGAAATCAAAATATTGAGATTGTTCATGCATCCTCATATTATACGGCTTTATGAGGTCATAGAGACACCATCAGATATATATGTTGTGATGGAGTATGTGAAATCTGGCGAGTTATTTGATTACATTGTTGAGAAGGGCAGATTGCAGGAGGATGAAGCTCGTAACTTTTTTCAGCAG : ATAATTTCTGGTGTGGAGTACTGCCATAGAAACATGGTGGTTCATAGAGACCTTAAGCCTGAAAACCTCCTTCTGGACTCCAAATGGAATGTGAAGATCGCAGATTTTGGTTTGAGCAATATCATGCGCGATGGTCATTTTCTGAAGACAAGTTGCGGAAGCCCAAACTATGCTGCCCCAGAG : GTTATATCAGGTAAATTGTATGCTGGCCCTGAGGTAGATGTATGGAGCTGTGGTGTTATTCTTTATGCTCTTCTCTGTGGCACCCTTCCGTTTGACGATGAAAACATACCCAATCTTTTTAAGAAAATAAAG : GGTGGAATATATACTCTGCCCAGCCATTTATCAGCTGGTGCGAGGGATTTGATTCCGAGGATGCTTATAGTCGACCCAATGAAGCGAATGACTATTCCTGAGATTCGCCTGCACCCTTGGTTCCAAGCTCATTTGCCACGCTATTTGGCCGTGCCTCCACCAGATACAACCCAACAAGCAAAGAAG : ATCGATGAAGAGATTCTTCAAGAGGTGGTTAAGATGGGATTTGACAGGAACAACCTTACTGAGTCTCTTCGCAATAGAGTTCAAAATGAG : GGCACTGTTGCATACTATCTGCTCCTGGACAATCGCCATCGTGTTTCCACTGGCTATCTTGGAGCTGAATTTCAGGAGTCCATG : GAATATGGTTACAACCGGATCAATTCTAATGAAACCGCTGCTTCCCCTGTTGGTCAACGTTTCCCAGGAATAATGGATTATCAGCAAGCTGGTGCAAGACAGTTCCCCATTGAAAGAAAATGGGCTCTTGGCCTCCAG : TCTCGAGCGCATCCACGTGAAATAATGACTGAAGTTTTGAAAGCTCTGCAAGAACTGAATGTATGTTGGAAAAAGATTGGTCAGTATAACATGAAATGTCGATGGGTTCCTAGCTTACCTGGTCATCATGAAGGCATGGGTGTTAATTCCATGCATGGGAATCAGTTCTTTGGAGATGATTCATCCATCATTGAGAATGATGGGGCCACAAAGTTAACAAATGTGGTCAAGTTTGAAGTTCAG : CTTTACAAAACCAGGGAGGAGAAGTACTTGCTTGACCTTCAGAGACTTCAGGGTCCACAATTCCTCTTCCTGGATCTCTGTGCTGCTTTTCTTGCTCAGCTTCGAGTACTTTAAAGTCTCCGAAATAAGGAGCTAAGTTGGAAAAAGCCCATGCTTGTATATAATTGGTATACCAGCTCAGTTACTGCATTTTGTCTTGTTAACAAATTCCACCCTGCTTGGTCAGAGGTGCCTAGCAACTCTTTTTTTCTTTTGATTCGCTAGGAGATCTAGCTCACTCTCTTTTTTAACGTTTATGGAATTTCAGTTACCTACAGTATCTACTTACAGATTGAACTGCAAGA</gDNA_template>
            <first_frame> N  F  H  I  L  L  L  N  F  F  N  L  L  L  G  V  *  L  L  P   : G  K  W  T  E  Q  Q  C  R  A  P  A  V  L  T  H  F  Y  G  T  I  N  S  G  K  H  L  A  L  D  R  S  A  K  L  K  *  L  N  I  R  *  Q  G  T  K  L  L  S  R  F  L  I  V  E  K  S  G  I  W  T  W  R  R  K  :  S  V  E  K  S  K  Y  *  D  C  S  C  I  L  I  L  Y  G  F  M  R  S  *  R  H  H  Q  I  Y  M  L  *  W  S  M  *  N  L  A  S  Y  L  I  T  L  L  R  R  A  D  C  R  R  M  K  L  V  T  F  F  S  R :   *  F  L  V  W  S  T  A  I  E  T  W  W  F  I  E  T  L  S  L  K  T  S  F  W  T  P  N  G  M  *  R  S  Q  I  L  V  *  A  I  S  C  A  M  V  I  F  *  R  Q  V  A  E  A  Q  T  M  L  P  Q  R :   L  Y  Q  V  N  C  M  L  A  L  R  *  M  Y  G  A  V  V  L  F  F  M  L  F  S  V  A  P  F  R  L  T  M  K  T  Y  P  I  F  L  R  K  *  R :   V  E  Y  I  L  C  P  A  I  Y  Q  L  V  R  G  I  *  F  R  G  C  L  *  S  T  Q  *  S  E  *  L  F  L  R  F  A  C  T  L  G  S  K  L  I  C  H  A  I  W  P  C  L  H  Q  I  Q  P  N  K  Q  R  R :   S  M  K  R  F  F  K  R  W  L  R  W  D  L  T  G  T  T  L  L  S  L  F  A  I  E  F  K  M  R :   A  L  L  H  T  I  C  S  W  T  I  A  I  V  F  P  L  A  I  L  E  L  N  F  R  S  P  W :   N  M  V  T  T  G  S  I  L  M  K  P  L  L  P  L  L  V  N  V  S  Q  E  *  W  I  I  S  K  L  V  Q  D  S  S  P  L  K  E  N  G  L  L  A  S  S :   L  E  R  I  H  V  K  *  *  L  K  F  *  K  L  C  K  N  *  M  Y  V  G  K  R  L  V  S  I  T  *  N  V  D  G  F  L  A  Y  L  V  I  M  K  A  W  V  L  I  P  C  M  G  I  S  S  L  E  M  I  H  P  S  L  R  M  M  G  P  Q  S  *  Q  M  W  S  S  L  K  F  S :   F  T  K  P  G  R  R  S  T  C  L  T  F  R  D  F  R  V  H  N  S  S  S  W  I  S  V  L  L  F  L  L  S  F  E  Y  F  K  V  S  E  I  R  S  *  V  G  K  S  P  C  L  Y  I  I  G  I  P  A  Q  L  L  H  F  V  L  L  T  N  S  T  L  L  G  Q  R  C  L  A  T  L  F  F  F  *  F  A  R  R  S  S  S  L  S  F  L  T  F  M  E  F  Q  L  P  T  V  S  T  Y  R  L  N  C  K  </first_frame>
            <second_frame>  I  F  I  F  C  C  *  I  S  S  I  C  F  L  G  F  S  F  C  Q  :  E  N  G  R  N  S  S  A  G  H  Q  Q  C  *  L  I  F  T  E  L  *  T  R  E  N  T  W  H  W  I  V  R  Q  S  *  N  S  *  T  Y  V  N  R  A  Q  S  C  C  Q  D  S  *  S  S  K  N  Q  E  Y  G  H  G  G  E  S :   P  *  R  N  Q  N  I  E  I  V  H  A  S  S  Y  Y  T  A  L  *  G  H  R  D  T  I  R  Y  I  C  C  D  G  V  C  E  I  W  R  V  I  *  L  H  C  *  E  G  Q  I  A  G  G  *  S  S  *  L  F  S  A   : D  N  F  W  C  G  V  L  P  *  K  H  G  G  S  *  R  P  *  A  *  K  P  P  S  G  L  Q  M  E  C  E  D  R  R  F  W  F  E  Q  Y  H  A  R  W  S  F  S  E  D  K  L  R  K  P  K  L  C  C  P  R   : G  Y  I  R  *  I  V  C  W  P  *  G  R  C  M  E  L  W  C  Y  S  L  C  S  S  L  W  H  P  S  V  *  R  *  K  H  T  Q  S  F  *  E  N  K   : G  W  N  I  Y  S  A  Q  P  F  I  S  W  C  E  G  F  D  S  E  D  A  Y  S  R  P  N  E  A  N  D  Y  S  *  D  S  P  A  P  L  V  P  S  S  F  A  T  L  F  G  R  A  S  T  R  Y  N  P  T  S  K  E   : D  R  *  R  D  S  S  R  G  G  *  D  G  I  *  Q  E  Q  P  Y  *  V  S  S  Q  *  S  S  K  *   : G  H  C  C  I  L  S  A  P  G  Q  S  P  S  C  F  H  W  L  S  W  S  *  I  S  G  V  H   : G  I  W  L  Q  P  D  Q  F  *  *  N  R  C  F  P  C  W  S  T  F  P  R  N  N  G  L  S  A  S  W  C  K  T  V  P  H  *  K  K  M  G  S  W  P  P   : V  S  S  A  S  T  *  N  N  D  *  S  F  E  S  S  A  R  T  E  C  M  L  E  K  D  W  S  V  *  H  E  M  S  M  G  S  *  L  T  W  S  S  *  R  H  G  C  *  F  H  A  W  E  S  V  L  W  R  *  F  I  H  H  *  E  *  W  G  H  K  V  N  K  C  G  Q  V  *  S  S   : A  L  Q  N  Q  G  G  E  V  L  A  *  P  S  E  T  S  G  S  T  I  P  L  P  G  S  L  C  C  F  S  C  S  A  S  S  T  L  K  S  P  K  *  G  A  K  L  E  K  A  H  A  C  I  *  L  V  Y  Q  L  S  Y  C  I  L  S  C  *  Q  I  P  P  C  L  V  R  G  A  *  Q  L  F  F  S  F  D  S  L  G  D  L  A  H  S  L  F  *  R  L  W  N  F  S  Y  L  Q  Y  L  L  T  D  *  T  A  R </second_frame>
            <third_frame>   F  S  Y  F  V  V  E  F  L  Q  S  A  S  W  G  L  A  S  A  R :   K  M  D  G  T  A  V  Q  G  T  S  S  V  D  S  F  L  R  N  Y  K  L  G  K  T  L  G  I  G  S  F  G  K  V  K  I  A  E  H  T  L  T  G  H  K  V  A  V  K  I  L  N  R  R  K  I  R  N  M  D  M  E  E  K   : V  R  R  E  I  K  I  L  R  L  F  M  H  P  H  I  I  R  L  Y  E  V  I  E  T  P  S  D  I  Y  V  V  M  E  Y  V  K  S  G  E  L  F  D  Y  I  V  E  K  G  R  L  Q  E  D  E  A  R  N  F  F  Q  Q  :  I  I  S  G  V  E  Y  C  H  R  N  M  V  V  H  R  D  L  K  P  E  N  L  L  L  D  S  K  W  N  V  K  I  A  D  F  G  L  S  N  I  M  R  D  G  H  F  L  K  T  S  C  G  S  P  N  Y  A  A  P  E  :  V  I  S  G  K  L  Y  A  G  P  E  V  D  V  W  S  C  G  V  I  L  Y  A  L  L  C  G  T  L  P  F  D  D  E  N  I  P  N  L  F  K  K  I  K  :  G  G  I  Y  T  L  P  S  H  L  S  A  G  A  R  D  L  I  P  R  M  L  I  V  D  P  M  K  R  M  T  I  P  E  I  R  L  H  P  W  F  Q  A  H  L  P  R  Y  L  A  V  P  P  P  D  T  T  Q  Q  A  K  K  :  I  D  E  E  I  L  Q  E  V  V  K  M  G  F  D  R  N  N  L  T  E  S  L  R  N  R  V  Q  N  E  :  G  T  V  A  Y  Y  L  L  L  D  N  R  H  R  V  S  T  G  Y  L  G  A  E  F  Q  E  S  M  :  E  Y  G  Y  N  R  I  N  S  N  E  T  A  A  S  P  V  G  Q  R  F  P  G  I  M  D  Y  Q  Q  A  G  A  R  Q  F  P  I  E  R  K  W  A  L  G  L  Q  :  S  R  A  H  P  R  E  I  M  T  E  V  L  K  A  L  Q  E  L  N  V  C  W  K  K  I  G  Q  Y  N  M  K  C  R  W  V  P  S  L  P  G  H  H  E  G  M  G  V  N  S  M  H  G  N  Q  F  F  G  D  D  S  S  I  I  E  N  D  G  A  T  K  L  T  N  V  V  K  F  E  V  Q  :  L  Y  K  T  R  E  E  K  Y  L  L  D  L  Q  R  L  Q  G  P  Q  F  L  F  L  D  L  C  A  A  F  L  A  Q  L  R  V  L  *  S  L  R  N  K  E  L  S  W  K  K  P  M  L  V  Y  N  W  Y  T  S  S  V  T  A  F  C  L  V  N  K  F  H  P  A  W  S  E  V  P  S  N  S  F  F  L  L  I  R  *  E  I  *  L  T  L  F  F  N  V  Y  G  I  S  V  T  Y  S  I  Y  L  Q  I  E  L  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22443" stop="22385"/>
                    <exon start="20931" stop="20738"/>
                    <exon start="20188" stop="20004"/>
                    <exon start="19915" stop="19733"/>
                    <exon start="16606" stop="16475"/>
                    <exon start="15880" stop="15695"/>
                    <exon start="13461" stop="13372"/>
                    <exon start="13300" stop="13217"/>
                    <exon start="12989" stop="12852"/>
                    <exon start="12429" stop="12187"/>
                    <exon start="11440" stop="11327"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1605</number_coding_nucleotides>
                  <number_encoded_amino_acids>535</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSYFVVEFLQSASWGLASARKMDGTAVQGTSSVDSFLRNYKLGKTLGIGSFGKVKIAEHTLTGHKVAVKILNRRKIRNMDMEEKVRREIKILRLFMHPHIIRLYEVIETPSDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVVHRDLKPENLLLDSKWNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSAGARDLIPRMLIVDPMKRMTIPEIRLHPWFQAHLPRYLAVPPPDTTQQAKKIDEEILQEVVKMGFDRNNLTESLRNRVQNEGTVAYYLLLDNRHRVSTGYLGAEFQESMEYGYNRINSNETAASPVGQRFPGIMDYQQAGARQFPIERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGQYNMKCRWVPSLPGHHEGMGVNSMHGNQFFGDDSSIIENDGATKLTNVVKFEVQLYKTREEKYLLDLQRLQGPQFLFLDLCAAFLAQLRVL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="34784" PGL_stop="36766"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34784" e_stop="35067"/>
            <exon e_start="36670" e_stop="36766"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.957" acc_prob="0.917" e_score="0.954"/>
          <exon-only e_score="0.969"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.954">
            <gDNA_exon_boundary e_start="34784" e_stop="35067" e_length="284"/>
          </exon>
          <intron i_serial="1" don_prob="0.957" acc_prob="0.917">
            <gDNA_intron_boundary i_start="35068" i_stop="36669" i_length="1602"/>
          </intron>
          <exon e_serial="2" e_score="0.969">
            <gDNA_exon_boundary e_start="36670" e_stop="36766" e_length="97"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34784" stop="35067"/>
              <exon start="36670" stop="36766"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E361870" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34790" stop="35067"/>
              <exon start="36670" stop="36766"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E363796" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTCTCAGAAATTACGTCAAATTACCATCTTATCCTTCTTCTTCTTCTTCCTCTCAATTCTCTCTGTTTTTCTTTTTTTTTTCAGAAAAAAATTTCCACAGAAACAAATCCAAAAGAGCTTGGATCCGACCCGTTTGGACCCATTTGCTCTTTCTAGTTTCTTCTCCTTTCTCTCTCTCTGTTTCTTGAAATTTTTTTCATTTTTTTTTCACAGAGAGGGAGACCTACATTCATTTATTATTATTATTGTTAATGGTGTTCTCTTCATTCAAAAAAACAAAAAG : GTATACATAATTTCGTGAGTCCAATCGAAATTTACATCTTTGCATGGTGTTCATCAGCAATTAGCAGACAGATTTGTGAGCTGAGTAGTAATAATGG</gDNA_template>
            <first_frame> T  L  R  N  Y  V  K  L  P  S  Y  P  S  S  S  S  S  S  Q  F  S  L  F  F  F  F  F  S  E  K  N  F  H  R  N  K  S  K  R  A  W  I  R  P  V  W  T  H  L  L  F  L  V  S  S  P  F  S  L  S  V  S  *  N  F  F  H  F  F  F  T  E  R  E  T  Y  I  H  L  L  L  L  L  L  M  V  F  S  S  F  K  K  T  K  R :   Y  T  *  F  R  E  S  N  R  N  L  H  L  C  M  V  F  I  S  N  *  Q  T  D  L  *  A  E  *  *  *  W </first_frame>
            <second_frame>  L  S  E  I  T  S  N  Y  H  L  I  L  L  L  L  L  P  L  N  S  L  C  F  S  F  F  F  Q  K  K  I  S  T  E  T  N  P  K  E  L  G  S  D  P  F  G  P  I  C  S  F  *  F  L  L  L  S  L  S  L  F  L  E  I  F  F  I  F  F  S  Q  R  G  R  P  T  F  I  Y  Y  Y  Y  C  *  W  C  S  L  H  S  K  K  Q  K   : G  I  H  N  F  V  S  P  I  E  I  Y  I  F  A  W  C  S  S  A  I  S  R  Q  I  C  E  L  S  S  N  N   </second_frame>
            <third_frame>   S  Q  K  L  R  Q  I  T  I  L  S  F  F  F  F  F  L  S  I  L  S  V  F  L  F  F  F  R  K  K  F  P  Q  K  Q  I  Q  K  S  L  D  P  T  R  L  D  P  F  A  L  S  S  F  F  S  F  L  S  L  C  F  L  K  F  F  S  F  F  F  H  R  E  G  D  L  H  S  F  I  I  I  I  V  N  G  V  L  F  I  Q  K  N  K  K  :  V  Y  I  I  S  *  V  Q  S  K  F  T  S  L  H  G  V  H  Q  Q  L  A  D  R  F  V  S  *  V  V  I  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34786" stop="35067"/>
                    <exon start="36670" stop="36687"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>297</number_coding_nucleotides>
                  <number_encoded_amino_acids>99</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SQKLRQITILSFFFFFLSILSVFLFFFRKKFPQKQIQKSLDPTRLDPFALSSFFSFLSLCFLKFFSFFFHREGDLHSFIIIIVNGVLFIQKNKKVYIIS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="38393" PGL_stop="39654"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38393" e_stop="38421"/>
            <exon e_start="38526" e_stop="38688"/>
            <exon e_start="38776" e_stop="38904"/>
            <exon e_start="39237" e_stop="39431"/>
            <exon e_start="39539" e_stop="39654"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.937" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.960" e_score="0.995"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="38393" e_stop="38421" e_length="29"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="38422" i_stop="38525" i_length="104"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="38526" e_stop="38688" e_length="163"/>
          </exon>
          <intron i_serial="2" don_prob="0.937" acc_prob="0.999">
            <gDNA_intron_boundary i_start="38689" i_stop="38775" i_length="87"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="38776" e_stop="38904" e_length="129"/>
          </exon>
          <intron i_serial="3" don_prob="0.974" acc_prob="0.984">
            <gDNA_intron_boundary i_start="38905" i_stop="39236" i_length="332"/>
          </intron>
          <exon e_serial="4" e_score="0.995">
            <gDNA_exon_boundary e_start="39237" e_stop="39431" e_length="195"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.960">
            <gDNA_intron_boundary i_start="39432" i_stop="39538" i_length="107"/>
          </intron>
          <exon e_serial="5" e_score="0.991">
            <gDNA_exon_boundary e_start="39539" e_stop="39654" e_length="116"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38393" stop="38421"/>
              <exon start="38526" stop="38688"/>
              <exon start="38776" stop="38904"/>
              <exon start="39237" stop="39431"/>
              <exon start="39539" stop="39654"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329828" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTAAGCTCCGTGGTGATAGTTATTTCAA : AGATAAGAGGAAAGCCCCTGCTACAAATGTGTCACCTTATACTCCAATTGGGGTAGACTTATTTGTTTGCCCAAGAAAGATCAATCATATAGCACAACACATTGAGCTTCCTTCTATAAAAGGAGATGGAAGAATACCACCTTTACTAATTATTAACATTCAG : CTGCCAACTTATCCTGCTCCGATGTTCGTTGGTGATGCTGATGGAGAAGGCTTGAGCCTTGTAGTATATTTCAAACTTACTGAAACTTTTGAGGAGGACATCTCTCCCCAGTTTCAGGACACCATCAAG : AGATTCATCGAGGATGACATGGAAAAGGTGAAAGGTTTTGCAAAAGAATCAACTGTTCCTTTCAGAGAGAGGTTGAAGATTATGGTTGGGTTGGTTAATCCAGATGAGATTGTTACAAGTTCAACTGAAAGGAAGCTTTTGAATGCTTACAATGAAAAGCCTGTGCTTTCCCGCCCTCAACACAATTTTTATCAG : GGCCCGAATTACCTAGAAGTTGATCTTGACATTCATCGCTTCAGCTACATAGCAAGAAAGGGGCTCGATGCTTTTAGAGAACGTTTACGACATGGAATACTTGATTTTGGTCTAAC</gDNA_template>
            <first_frame> F  K  L  R  G  D  S  Y  F  K :   D  K  R  K  A  P  A  T  N  V  S  P  Y  T  P  I  G  V  D  L  F  V  C  P  R  K  I  N  H  I  A  Q  H  I  E  L  P  S  I  K  G  D  G  R  I  P  P  L  L  I  I  N  I  Q  :  L  P  T  Y  P  A  P  M  F  V  G  D  A  D  G  E  G  L  S  L  V  V  Y  F  K  L  T  E  T  F  E  E  D  I  S  P  Q  F  Q  D  T  I  K  :  R  F  I  E  D  D  M  E  K  V  K  G  F  A  K  E  S  T  V  P  F  R  E  R  L  K  I  M  V  G  L  V  N  P  D  E  I  V  T  S  S  T  E  R  K  L  L  N  A  Y  N  E  K  P  V  L  S  R  P  Q  H  N  F  Y  Q  :  G  P  N  Y  L  E  V  D  L  D  I  H  R  F  S  Y  I  A  R  K  G  L  D  A  F  R  E  R  L  R  H  G  I  L  D  F  G  L   </first_frame>
            <second_frame>  L  S  S  V  V  I  V  I  S   : K  I  R  G  K  P  L  L  Q  M  C  H  L  I  L  Q  L  G  *  T  Y  L  F  A  Q  E  R  S  I  I  *  H  N  T  L  S  F  L  L  *  K  E  M  E  E  Y  H  L  Y  *  L  L  T  F  S :   C  Q  L  I  L  L  R  C  S  L  V  M  L  M  E  K  A  *  A  L  *  Y  I  S  N  L  L  K  L  L  R  R  T  S  L  P  S  F  R  T  P  S  R :   D  S  S  R  M  T  W  K  R  *  K  V  L  Q  K  N  Q  L  F  L  S  E  R  G  *  R  L  W  L  G  W  L  I  Q  M  R  L  L  Q  V  Q  L  K  G  S  F  *  M  L  T  M  K  S  L  C  F  P  A  L  N  T  I  F  I  R :   A  R  I  T  *  K  L  I  L  T  F  I  A  S  A  T  *  Q  E  R  G  S  M  L  L  E  N  V  Y  D  M  E  Y  L  I  L  V  *  </second_frame>
            <third_frame>   *  A  P  W  *  *  L  F  Q  :  R  *  E  E  S  P  C  Y  K  C  V  T  L  Y  S  N  W  G  R  L  I  C  L  P  K  K  D  Q  S  Y  S  T  T  H  *  A  S  F  Y  K  R  R  W  K  N  T  T  F  T  N  Y  *  H  S   : A  A  N  L  S  C  S  D  V  R  W  *  C  *  W  R  R  L  E  P  C  S  I  F  Q  T  Y  *  N  F  *  G  G  H  L  S  P  V  S  G  H  H  Q   : E  I  H  R  G  *  H  G  K  G  E  R  F  C  K  R  I  N  C  S  F  Q  R  E  V  E  D  Y  G  W  V  G  *  S  R  *  D  C  Y  K  F  N  *  K  E  A  F  E  C  L  Q  *  K  A  C  A  F  P  P  S  T  Q  F  L  S   : G  P  E  L  P  R  S  *  S  *  H  S  S  L  Q  L  H  S  K  K  G  A  R  C  F  *  R  T  F  T  T  W  N  T  *  F  W  S  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38393" stop="38421"/>
                    <exon start="38526" stop="38688"/>
                    <exon start="38776" stop="38904"/>
                    <exon start="39237" stop="39431"/>
                    <exon start="39539" stop="39652"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>630</number_coding_nucleotides>
                  <number_encoded_amino_acids>210</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FKLRGDSYFKDKRKAPATNVSPYTPIGVDLFVCPRKINHIAQHIELPSIKGDGRIPPLLIINIQLPTYPAPMFVGDADGEGLSLVVYFKLTETFEEDISPQFQDTIKRFIEDDMEKVKGFAKESTVPFRERLKIMVGLVNPDEIVTSSTERKLLNAYNEKPVLSRPQHNFYQGPNYLEVDLDIHRFSYIARKGLDAFRERLRHGILDFGL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="40971" PGL_stop="43593"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40971" e_stop="41231"/>
            <exon e_start="41928" e_stop="42808"/>
            <exon e_start="43545" e_stop="43593"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.996" e_score="0.979"/>
          <exon-intron don_prob="0.000" acc_prob="0.992" e_score="0.997"/>
          <exon-only e_score="0.510"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="40971" e_stop="41231" e_length="261"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.996">
            <gDNA_intron_boundary i_start="41232" i_stop="41927" i_length="696"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="41928" e_stop="42808" e_length="881"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="42809" i_stop="43544" i_length="736"/>
          </intron>
          <exon e_serial="3" e_score="0.510">
            <gDNA_exon_boundary e_start="43545" e_stop="43593" e_length="49"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40971" stop="41231"/>
              <exon start="41928" stop="42452"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728262" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40974" stop="41231"/>
              <exon start="41928" stop="42238"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340304" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40991" stop="41231"/>
              <exon start="41928" stop="42567"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41024" stop="41231"/>
              <exon start="41928" stop="42484"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41025" stop="41231"/>
              <exon start="41928" stop="42214"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267514" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41026" stop="41231"/>
              <exon start="41928" stop="42208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267134" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41160" stop="41231"/>
              <exon start="41928" stop="42631"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730864" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41959" stop="42214"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287757" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42152" stop="42808"/>
              <exon start="43545" stop="43593"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E537778" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCACTTAACCAATATATACACACTGATCAATTTCTTTTTATAGCAAGAATCTCTCTAAATCTGCAATTGCAGTACTATTTGGCTAATTAAGGCAAGACATTCTCTATTCAATATGGAAGCTTGCTTTGTCACTTCAAAGCCCCTCTCAGAGAAACTCTTCCCTTTGTTAGGATCAAGAGTTTCTTATTCTACAAGGAGGAGGTCATTTGTTAGTCAATTTCATCAGCCAAAAAAAGTTGGCAATCCTTTTTCAGTGACAT : GTTGCCAGGCAAGTTCACCATTGCCATCACCTTCACCTCAAGATGAAGAAAGGCCTTTCACTGAAACAGACTGGCGATCATTTCGAGCACGCTTAGTCGCCGGCGAACGAGCTTCCCGGTCAGAAGATCGCTCCTCCGTCGTCAATCCCGACACCGTCGACGATCTTCCTCCGCCTCCGGCCGTCACAATCGGCTCGAAATGGGCCCACACCATTCACGAACCGGAAAAAGGTTGTATACTCATCGCTACCGAAAAGCTGGATGGCGTTCACATATTTGAACGGACTGTAGTTCTGTTGTTGTCAATGGGCCCAATAGGCCCAATGGGCTTAATTTTAAACAGGCCTTCACTCATGTCCATTAAGGAAATGAAACCGTCGGTACTTGACATGTCGGGGACATTTGCTAATAGGCCATTGTTTTTTGGTGGGCCTTTAGAAGATGAGCTTTTCTTAGTAAGCCCAAATGAAGATGGGCTTGGAAAAAGTGGTGTTTTTGATGAAGTAATGAGAGGTTTGTACTATGGTACAAAAGAAAGTGTGGGATGTGCTTCTGAAATGGTGAAAAGGGATGTTGTTGGGGTTGATAATTTTAGGTTTTTTGATGGGTATTGTGCATGGGAAAAAGATCAATTGAAGGATGAGATTAGAGCTGGTTATTGGACTGTAGCTGCTTGTAGCCCAAGTGTAATTGGGCTTTCTGATGTGGGAAGTGTTGGGCTTTGGGATGAAGTTCTTGGGCTTATGACTCCAAAGAAAGTTTGGTGATGTGAATTTTTGAGTTTAGATTTGTGTTGTTGAAAGTAGAAGGCCCAAATTATTGTAAATTATTATGCATTGTTTTTTTTAACCAATTAAAAAGATAATGATATTATTGTCTAA : AAGAGATAACTTAATTGCAGTGAAAAAGAAAATTAACAAACCACATCCC</gDNA_template>
            <first_frame> S  T  *  P  I  Y  T  H  *  S  I  S  F  Y  S  K  N  L  S  K  S  A  I  A  V  L  F  G  *  L  R  Q  D  I  L  Y  S  I  W  K  L  A  L  S  L  Q  S  P  S  Q  R  N  S  S  L  C  *  D  Q  E  F  L  I  L  Q  G  G  G  H  L  L  V  N  F  I  S  Q  K  K  L  A  I  L  F  Q  *  H  :  V  A  R  Q  V  H  H  C  H  H  L  H  L  K  M  K  K  G  L  S  L  K  Q  T  G  D  H  F  E  H  A  *  S  P  A  N  E  L  P  G  Q  K  I  A  P  P  S  S  I  P  T  P  S  T  I  F  L  R  L  R  P  S  Q  S  A  R  N  G  P  T  P  F  T  N  R  K  K  V  V  Y  S  S  L  P  K  S  W  M  A  F  T  Y  L  N  G  L  *  F  C  C  C  Q  W  A  Q  *  A  Q  W  A  *  F  *  T  G  L  H  S  C  P  L  R  K  *  N  R  R  Y  L  T  C  R  G  H  L  L  I  G  H  C  F  L  V  G  L  *  K  M  S  F  S  *  *  A  Q  M  K  M  G  L  E  K  V  V  F  L  M  K  *  *  E  V  C  T  M  V  Q  K  K  V  W  D  V  L  L  K  W  *  K  G  M  L  L  G  L  I  I  L  G  F  L  M  G  I  V  H  G  K  K  I  N  *  R  M  R  L  E  L  V  I  G  L  *  L  L  V  A  Q  V  *  L  G  F  L  M  W  E  V  L  G  F  G  M  K  F  L  G  L  *  L  Q  R  K  F  G  D  V  N  F  *  V  *  I  C  V  V  E  S  R  R  P  K  L  L  *  I  I  M  H  C  F  F  *  P  I  K  K  I  M  I  L  L  S  K :   R  D  N  L  I  A  V  K  K  K  I  N  K  P  H  P </first_frame>
            <second_frame>  P  L  N  Q  Y  I  H  T  D  Q  F  L  F  I  A  R  I  S  L  N  L  Q  L  Q  Y  Y  L  A  N  *  G  K  T  F  S  I  Q  Y  G  S  L  L  C  H  F  K  A  P  L  R  E  T  L  P  F  V  R  I  K  S  F  L  F  Y  K  E  E  V  I  C  *  S  I  S  S  A  K  K  S  W  Q  S  F  F  S  D  M :   L  P  G  K  F  T  I  A  I  T  F  T  S  R  *  R  K  A  F  H  *  N  R  L  A  I  I  S  S  T  L  S  R  R  R  T  S  F  P  V  R  R  S  L  L  R  R  Q  S  R  H  R  R  R  S  S  S  A  S  G  R  H  N  R  L  E  M  G  P  H  H  S  R  T  G  K  R  L  Y  T  H  R  Y  R  K  A  G  W  R  S  H  I  *  T  D  C  S  S  V  V  V  N  G  P  N  R  P  N  G  L  N  F  K  Q  A  F  T  H  V  H  *  G  N  E  T  V  G  T  *  H  V  G  D  I  C  *  *  A  I  V  F  W  W  A  F  R  R  *  A  F  L  S  K  P  K  *  R  W  A  W  K  K  W  C  F  *  *  S  N  E  R  F  V  L  W  Y  K  R  K  C  G  M  C  F  *  N  G  E  K  G  C  C  W  G  *  *  F  *  V  F  *  W  V  L  C  M  G  K  R  S  I  E  G  *  D  *  S  W  L  L  D  C  S  C  L  *  P  K  C  N  W  A  F  *  C  G  K  C  W  A  L  G  *  S  S  W  A  Y  D  S  K  E  S  L  V  M  *  I  F  E  F  R  F  V  L  L  K  V  E  G  P  N  Y  C  K  L  L  C  I  V  F  F  N  Q  L  K  R  *  *  Y  Y  C  L   : K  E  I  T  *  L  Q  *  K  R  K  L  T  N  H  I   </second_frame>
            <third_frame>   H  L  T  N  I  Y  T  L  I  N  F  F  L  *  Q  E  S  L  *  I  C  N  C  S  T  I  W  L  I  K  A  R  H  S  L  F  N  M  E  A  C  F  V  T  S  K  P  L  S  E  K  L  F  P  L  L  G  S  R  V  S  Y  S  T  R  R  R  S  F  V  S  Q  F  H  Q  P  K  K  V  G  N  P  F  S  V  T   : C  C  Q  A  S  S  P  L  P  S  P  S  P  Q  D  E  E  R  P  F  T  E  T  D  W  R  S  F  R  A  R  L  V  A  G  E  R  A  S  R  S  E  D  R  S  S  V  V  N  P  D  T  V  D  D  L  P  P  P  P  A  V  T  I  G  S  K  W  A  H  T  I  H  E  P  E  K  G  C  I  L  I  A  T  E  K  L  D  G  V  H  I  F  E  R  T  V  V  L  L  L  S  M  G  P  I  G  P  M  G  L  I  L  N  R  P  S  L  M  S  I  K  E  M  K  P  S  V  L  D  M  S  G  T  F  A  N  R  P  L  F  F  G  G  P  L  E  D  E  L  F  L  V  S  P  N  E  D  G  L  G  K  S  G  V  F  D  E  V  M  R  G  L  Y  Y  G  T  K  E  S  V  G  C  A  S  E  M  V  K  R  D  V  V  G  V  D  N  F  R  F  F  D  G  Y  C  A  W  E  K  D  Q  L  K  D  E  I  R  A  G  Y  W  T  V  A  A  C  S  P  S  V  I  G  L  S  D  V  G  S  V  G  L  W  D  E  V  L  G  L  M  T  P  K  K  V  W  *  C  E  F  L  S  L  D  L  C  C  *  K  *  K  A  Q  I  I  V  N  Y  Y  A  L  F  F  L  T  N  *  K  D  N  D  I  I  V  *  :  K  R  *  L  N  C  S  E  K  E  N  *  Q  T  T  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41030" stop="41231"/>
                    <exon start="41928" stop="42694"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>966</number_coding_nucleotides>
                  <number_encoded_amino_acids>322</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ICNCSTIWLIKARHSLFNMEACFVTSKPLSEKLFPLLGSRVSYSTRRRSFVSQFHQPKKVGNPFSVTCCQASSPLPSPSPQDEERPFTETDWRSFRARLVAGERASRSEDRSSVVNPDTVDDLPPPPAVTIGSKWAHTIHEPEKGCILIATEKLDGVHIFERTVVLLLSMGPIGPMGLILNRPSLMSIKEMKPSVLDMSGTFANRPLFFGGPLEDELFLVSPNEDGLGKSGVFDEVMRGLYYGTKESVGCASEMVKRDVVGVDNFRFFDGYCAWEKDQLKDEIRAGYWTVAACSPSVIGLSDVGSVGLWDEVLGLMTPKKVW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="42135" PGL_stop="41785"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="42135" e_stop="41785"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="42135" e_stop="41785" e_length="351"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42135" stop="41785"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344465" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGGCCCATTTCGAGCCGATTGTGACGGCCGGAGGCGGAGGAAGATCGTCGACGGTGTCGGGATTGACGACGGAGGAGCGATCTTCTGACCGGGAAGCTCGTTCGCCGGCGACTAAGCGTGCTCGAAATGATCGCCAGTCTGTTTCAGTGAAAGGCCTTTCTTCATCTTGAGGTGAAGGTGATGGCAATGGTGAACTTGCCTGGCAACCTACAAGTATCAAAATTTTCTTAATATATGTTTATCTGATCATCTTTTATAGCTTAATTTGAAAATTACCTGAAAATCTGTTTCATTTTACAGTATGTGCCAAAATTTATGTGATTCAAAATGTTTCATATATAAGCATTTAA</gDNA_template>
            <first_frame> W  A  H  F  E  P  I  V  T  A  G  G  G  G  R  S  S  T  V  S  G  L  T  T  E  E  R  S  S  D  R  E  A  R  S  P  A  T  K  R  A  R  N  D  R  Q  S  V  S  V  K  G  L  S  S  S  *  G  E  G  D  G  N  G  E  L  A  W  Q  P  T  S  I  K  I  F  L  I  Y  V  Y  L  I  I  F  Y  S  L  I  *  K  L  P  E  N  L  F  H  F  T  V  C  A  K  I  Y  V  I  Q  N  V  S  Y  I  S  I  * </first_frame>
            <second_frame>  G  P  I  S  S  R  L  *  R  P  E  A  E  E  D  R  R  R  C  R  D  *  R  R  R  S  D  L  L  T  G  K  L  V  R  R  R  L  S  V  L  E  M  I  A  S  L  F  Q  *  K  A  F  L  H  L  E  V  K  V  M  A  M  V  N  L  P  G  N  L  Q  V  S  K  F  S  *  Y  M  F  I  *  S  S  F  I  A  *  F  E  N  Y  L  K  I  C  F  I  L  Q  Y  V  P  K  F  M  *  F  K  M  F  H  I  *  A  F   </second_frame>
            <third_frame>   G  P  F  R  A  D  C  D  G  R  R  R  R  K  I  V  D  G  V  G  I  D  D  G  G  A  I  F  *  P  G  S  S  F  A  G  D  *  A  C  S  K  *  S  P  V  C  F  S  E  R  P  F  F  I  L  R  *  R  *  W  Q  W  *  T  C  L  A  T  Y  K  Y  Q  N  F  L  N  I  C  L  S  D  H  L  L  *  L  N  L  K  I  T  *  K  S  V  S  F  Y  S  M  C  Q  N  L  C  D  S  K  C  F  I  Y  K  H  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0280E02.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="44448" PGL_stop="43647"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44448" e_stop="43647"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.944">
            <gDNA_exon_boundary e_start="44448" e_stop="43647" e_length="802"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44448" stop="43647"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545967" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGAATAATACCAATGTTGAGAATGTGAAGAAGGCTGCTGTCATTCATTACAATGGTCAATCGAAGCCTTGGCTTGAAATAGGATTTGAGCATCTCCGGCCTTTTTGGACCAAGTATGTTAACAGCACCAATGATTTCATTAAGAACTGTCACATATTGGAGTAGTGTACGTGTTATGCTGCAAGGACAATACGCAGGATAGAAATTCAAATGGCATAGGCTTTGCTGAATATTTGCTAGGGAACTTAAAATCGAATCGAGAAGGAGATTCTGATACTTGACAGAATTGGCTGGGATATATATTCAGGTATGGGATGTGTGCTACTTTGACTCACTTCTATGAAGAGTACCTGTGATACTAGCATGGATATGAGATTCGTTCTTCCCATTTGTAAAATAAAAATTCGTTGCCTAGCTTGTTGATGTGACAAAAGTACACATTATATCTGCACTTTAGATGGATGTAGTATACATTTGGCTCTCACTGTTACCATCAGTGATACAAAATCGGGACATAACGAGAAGAAAAGCTAGGATGTGGCGCTCACTTTTGGCTATACATTTGGCTCCATTAGAGGTTGAGATGATTCTTTTGGCTTCATTTCATTATTTTTTTACCTAGTCAGTTTGATCGCCATCGCCCTTGTTGTTTTCTCAATATCTTGTCATTTTAGACAGTAGATTATAGAAAATTTTAAGTCCCTTGTTAATGAACTGTGTAGGTTATACATATTGGTACTTTTTTGTATGATCAAGAGTAATTATAGACAAGCTCAGATTATTATTATTTTTTTTTATCAAA</gDNA_template>
            <first_frame> Q  N  N  T  N  V  E  N  V  K  K  A  A  V  I  H  Y  N  G  Q  S  K  P  W  L  E  I  G  F  E  H  L  R  P  F  W  T  K  Y  V  N  S  T  N  D  F  I  K  N  C  H  I  L  E  *  C  T  C  Y  A  A  R  T  I  R  R  I  E  I  Q  M  A  *  A  L  L  N  I  C  *  G  T  *  N  R  I  E  K  E  I  L  I  L  D  R  I  G  W  D  I  Y  S  G  M  G  C  V  L  L  *  L  T  S  M  K  S  T  C  D  T  S  M  D  M  R  F  V  L  P  I  C  K  I  K  I  R  C  L  A  C  *  C  D  K  S  T  H  Y  I  C  T  L  D  G  C  S  I  H  L  A  L  T  V  T  I  S  D  T  K  S  G  H  N  E  K  K  S  *  D  V  A  L  T  F  G  Y  T  F  G  S  I  R  G  *  D  D  S  F  G  F  I  S  L  F  F  Y  L  V  S  L  I  A  I  A  L  V  V  F  S  I  S  C  H  F  R  Q  *  I  I  E  N  F  K  S  L  V  N  E  L  C  R  L  Y  I  L  V  L  F  C  M  I  K  S  N  Y  R  Q  A  Q  I  I  I  I  F  F  Y  Q  </first_frame>
            <second_frame>  R  I  I  P  M  L  R  M  *  R  R  L  L  S  F  I  T  M  V  N  R  S  L  G  L  K  *  D  L  S  I  S  G  L  F  G  P  S  M  L  T  A  P  M  I  S  L  R  T  V  T  Y  W  S  S  V  R  V  M  L  Q  G  Q  Y  A  G  *  K  F  K  W  H  R  L  C  *  I  F  A  R  E  L  K  I  E  S  R  R  R  F  *  Y  L  T  E  L  A  G  I  Y  I  Q  V  W  D  V  C  Y  F  D  S  L  L  *  R  V  P  V  I  L  A  W  I  *  D  S  F  F  P  F  V  K  *  K  F  V  A  *  L  V  D  V  T  K  V  H  I  I  S  A  L  *  M  D  V  V  Y  I  W  L  S  L  L  P  S  V  I  Q  N  R  D  I  T  R  R  K  A  R  M  W  R  S  L  L  A  I  H  L  A  P  L  E  V  E  M  I  L  L  A  S  F  H  Y  F  F  T  *  S  V  *  S  P  S  P  L  L  F  S  Q  Y  L  V  I  L  D  S  R  L  *  K  I  L  S  P  L  L  M  N  C  V  G  Y  T  Y  W  Y  F  F  V  *  S  R  V  I  I  D  K  L  R  L  L  L  F  F  F  I  K </second_frame>
            <third_frame>   E  *  Y  Q  C  *  E  C  E  E  G  C  C  H  S  L  Q  W  S  I  E  A  L  A  *  N  R  I  *  A  S  P  A  F  L  D  Q  V  C  *  Q  H  Q  *  F  H  *  E  L  S  H  I  G  V  V  Y  V  L  C  C  K  D  N  T  Q  D  R  N  S  N  G  I  G  F  A  E  Y  L  L  G  N  L  K  S  N  R  E  G  D  S  D  T  *  Q  N  W  L  G  Y  I  F  R  Y  G  M  C  A  T  L  T  H  F  Y  E  E  Y  L  *  Y  *  H  G  Y  E  I  R  S  S  H  L  *  N  K  N  S  L  P  S  L  L  M  *  Q  K  Y  T  L  Y  L  H  F  R  W  M  *  Y  T  F  G  S  H  C  Y  H  Q  *  Y  K  I  G  T  *  R  E  E  K  L  G  C  G  A  H  F  W  L  Y  I  W  L  H  *  R  L  R  *  F  F  W  L  H  F  I  I  F  L  P  S  Q  F  D  R  H  R  P  C  C  F  L  N  I  L  S  F  *  T  V  D  Y  R  K  F  *  V  P  C  *  *  T  V  *  V  I  H  I  G  T  F  L  Y  D  Q  E  *  L  *  T  S  S  D  Y  Y  Y  F  F  L  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0280E02.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="47507" PGL_stop="45420"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47507" e_stop="47472"/>
            <exon e_start="46511" e_stop="45921"/>
            <exon e_start="45508" e_stop="45420"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.921"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="47507" e_stop="47472" e_length="36"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="47471" i_stop="46512" i_length="960"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="46511" e_stop="45921" e_length="591"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.997">
            <gDNA_intron_boundary i_start="45920" i_stop="45509" i_length="412"/>
          </intron>
          <exon e_serial="3" e_score="0.921">
            <gDNA_exon_boundary e_start="45508" e_stop="45420" e_length="89"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47507" stop="47472"/>
              <exon start="46511" stop="45921"/>
              <exon start="45508" stop="45420"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E687884" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47506" stop="47472"/>
              <exon start="46511" stop="45921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327574" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGCACAAAAGAATTTGCTTTGATGTTGAAGGGAATG : ATGGAGAGATCTGAAAGGGAGATCAGGGAATCAAAATTTGCTGAGTTAACGAATAAACATTTTGCAGCAAGTGCAGTTCCAAAAGGCATTCACTGTCTTTCACTGCGTTTGACTGATGAATACTCGACCAATGCTCATGCACGCAAGCAGTTGCCTTCACCAGAACTACTCCCTTTGCTTTCTGACAACTCATTGCACCATTTTGTACTGTCAACTGATAACATCCTAGCTGCAGCAGTTGTCGTCAGTTCTGGCGTGCAGTCAGCTCTAAAACCTGAAAAGATTGTTTTCCATGTCATCACTGATAAGAAAACATATGCAGGCATGCATTCATGGTTTGCTCTGAATCCTGTCTCTCCTGCTATTGTGGAAGTTAAAGGTATTCATCAGTTTGATTGGCTGACAAGAGAAAATGTTCCCGTACTCGAAGCAGTTGAGAGCCATTATGGGATTCGGAAATACTACCATGGAAATCATATTGCAGGTGCCAATCTCAGTGATATTACTCCACGCTCTTTTGCCTCAAAATTGCAGGCTAGAAGTCCAAAATACATATCCTTGCTAAATCATATTCGCGTATATTTACCAGAG : CTTTTTCCGAACCTTGATAAAGTGGTTTTCTTAGACGATGATATTGTAATTCAGCGTGACCTATCCCCCTTGTGGGACATTGATCTGAA</gDNA_template>
            <first_frame> S  T  K  E  F  A  L  M  L  K  G  M  :  M  E  R  S  E  R  E  I  R  E  S  K  F  A  E  L  T  N  K  H  F  A  A  S  A  V  P  K  G  I  H  C  L  S  L  R  L  T  D  E  Y  S  T  N  A  H  A  R  K  Q  L  P  S  P  E  L  L  P  L  L  S  D  N  S  L  H  H  F  V  L  S  T  D  N  I  L  A  A  A  V  V  V  S  S  G  V  Q  S  A  L  K  P  E  K  I  V  F  H  V  I  T  D  K  K  T  Y  A  G  M  H  S  W  F  A  L  N  P  V  S  P  A  I  V  E  V  K  G  I  H  Q  F  D  W  L  T  R  E  N  V  P  V  L  E  A  V  E  S  H  Y  G  I  R  K  Y  Y  H  G  N  H  I  A  G  A  N  L  S  D  I  T  P  R  S  F  A  S  K  L  Q  A  R  S  P  K  Y  I  S  L  L  N  H  I  R  V  Y  L  P  E  :  L  F  P  N  L  D  K  V  V  F  L  D  D  D  I  V  I  Q  R  D  L  S  P  L  W  D  I  D  L   </first_frame>
            <second_frame>  A  Q  K  N  L  L  *  C  *  R  E  * :   W  R  D  L  K  G  R  S  G  N  Q  N  L  L  S  *  R  I  N  I  L  Q  Q  V  Q  F  Q  K  A  F  T  V  F  H  C  V  *  L  M  N  T  R  P  M  L  M  H  A  S  S  C  L  H  Q  N  Y  S  L  C  F  L  T  T  H  C  T  I  L  Y  C  Q  L  I  T  S  *  L  Q  Q  L  S  S  V  L  A  C  S  Q  L  *  N  L  K  R  L  F  S  M  S  S  L  I  R  K  H  M  Q  A  C  I  H  G  L  L  *  I  L  S  L  L  L  L  W  K  L  K  V  F  I  S  L  I  G  *  Q  E  K  M  F  P  Y  S  K  Q  L  R  A  I  M  G  F  G  N  T  T  M  E  I  I  L  Q  V  P  I  S  V  I  L  L  H  A  L  L  P  Q  N  C  R  L  E  V  Q  N  T  Y  P  C  *  I  I  F  A  Y  I  Y  Q  S :   F  F  R  T  L  I  K  W  F  S  *  T  M  I  L  *  F  S  V  T  Y  P  P  C  G  T  L  I  *  </second_frame>
            <third_frame>   H  K  R  I  C  F  D  V  E  G  N   : D  G  E  I  *  K  G  D  Q  G  I  K  I  C  *  V  N  E  *  T  F  C  S  K  C  S  S  K  R  H  S  L  S  F  T  A  F  D  *  *  I  L  D  Q  C  S  C  T  Q  A  V  A  F  T  R  T  T  P  F  A  F  *  Q  L  I  A  P  F  C  T  V  N  *  *  H  P  S  C  S  S  C  R  Q  F  W  R  A  V  S  S  K  T  *  K  D  C  F  P  C  H  H  *  *  E  N  I  C  R  H  A  F  M  V  C  S  E  S  C  L  S  C  Y  C  G  S  *  R  Y  S  S  V  *  L  A  D  K  R  K  C  S  R  T  R  S  S  *  E  P  L  W  D  S  E  I  L  P  W  K  S  Y  C  R  C  Q  S  Q  *  Y  Y  S  T  L  F  C  L  K  I  A  G  *  K  S  K  I  H  I  L  A  K  S  Y  S  R  I  F  T  R   : A  F  S  E  P  *  *  S  G  F  L  R  R  *  Y  C  N  S  A  *  P  I  P  L  V  G  H  *  S  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47507" stop="47472"/>
                    <exon start="46511" stop="45921"/>
                    <exon start="45508" stop="45422"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>714</number_coding_nucleotides>
                  <number_encoded_amino_acids>238</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>STKEFALMLKGMMERSEREIRESKFAELTNKHFAASAVPKGIHCLSLRLTDEYSTNAHARKQLPSPELLPLLSDNSLHHFVLSTDNILAAAVVVSSGVQSALKPEKIVFHVITDKKTYAGMHSWFALNPVSPAIVEVKGIHQFDWLTRENVPVLEAVESHYGIRKYYHGNHIAGANLSDITPRSFASKLQARSPKYISLLNHIRVYLPELFPNLDKVVFLDDDIVIQRDLSPLWDIDL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="50096" PGL_stop="49444"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="50096" e_stop="49444"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.922">
            <gDNA_exon_boundary e_start="50096" e_stop="49444" e_length="653"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50096" stop="49444"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549287" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50095" stop="49632"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E359108" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAATAGAGAAAGAATTATCCATTAAAATTAGAAGAAAAAAAAACACAGAATAACACAAAAATAGGCCATTACATCCCATCTTCCCCTTTTTTTCTCTTTCTGTATTCCATTCTTCTCATCTCAATTTTTTTTTTTAGCTCATTTCAGCTCAAGAACCAAATTCCCACCTCCGATTCTGTTCGGATTTATTCATCAGATTCAAATTTTCGTTTTTTGGGGTTGATTTAATTCATTCGTTTCATACAGAGATTTTTTTTTGCACACAGATGTGTGTGTGTGTTTATGAAGAAATTGGTAATAGAAGGTTGTAGACGTTTCCGTTTATTATAGAAGCTATAGCTCGGTTTGGGTTTTTAGGAGGAGGTGAGAGAATCCAGTACATTGGTCTCGAAAGGGACCGTTAACGGTAAGATCCTCAAAATTTCTGTTTTGGTGGATCTGATGGTGAAATGAGCGAATTTGGACGGTTGAATTGGAAAAGAGGTTAAGAGTCTTCAAATTTGTATTGTGGTGGATATGGTGGTGAAAAAGATCATTTCTTGATTGTTTTAAGATTGCCCCACTGCGTAGAATAAAGGGAGAGATAGTGGGTGCCGTCCCTTATTTAAGGTAGCTTTTTGTTTAGCTTTGTTTGGAGTTTTGGTGAATTGGGG</gDNA_template>
            <first_frame> K  *  R  K  N  Y  P  L  K  L  E  E  K  K  T  Q  N  N  T  K  I  G  H  Y  I  P  S  S  P  F  F  L  F  L  Y  S  I  L  L  I  S  I  F  F  F  S  S  F  Q  L  K  N  Q  I  P  T  S  D  S  V  R  I  Y  S  S  D  S  N  F  R  F  L  G  L  I  *  F  I  R  F  I  Q  R  F  F  F  A  H  R  C  V  C  V  F  M  K  K  L  V  I  E  G  C  R  R  F  R  L  L  *  K  L  *  L  G  L  G  F  *  E  E  V  R  E  S  S  T  L  V  S  K  G  T  V  N  G  K  I  L  K  I  S  V  L  V  D  L  M  V  K  *  A  N  L  D  G  *  I  G  K  E  V  K  S  L  Q  I  C  I  V  V  D  M  V  V  K  K  I  I  S  *  L  F  *  D  C  P  T  A  *  N  K  G  R  D  S  G  C  R  P  L  F  K  V  A  F  C  L  A  L  F  G  V  L  V  N  W   </first_frame>
            <second_frame>  N  R  E  R  I  I  H  *  N  *  K  K  K  K  H  R  I  T  Q  K  *  A  I  T  S  H  L  P  L  F  F  S  F  C  I  P  F  F  S  S  Q  F  F  F  L  A  H  F  S  S  R  T  K  F  P  P  P  I  L  F  G  F  I  H  Q  I  Q  I  F  V  F  W  G  *  F  N  S  F  V  S  Y  R  D  F  F  L  H  T  D  V  C  V  C  L  *  R  N  W  *  *  K  V  V  D  V  S  V  Y  Y  R  S  Y  S  S  V  W  V  F  R  R  R  *  E  N  P  V  H  W  S  R  K  G  P  L  T  V  R  S  S  K  F  L  F  W  W  I  *  W  *  N  E  R  I  W  T  V  E  L  E  K  R  L  R  V  F  K  F  V  L  W  W  I  W  W  *  K  R  S  F  L  D  C  F  K  I  A  P  L  R  R  I  K  G  E  I  V  G  A  V  P  Y  L  R  *  L  F  V  *  L  C  L  E  F  W  *  I  G  </second_frame>
            <third_frame>   I  E  K  E  L  S  I  K  I  R  R  K  K  N  T  E  *  H  K  N  R  P  L  H  P  I  F  P  F  F  S  L  S  V  F  H  S  S  H  L  N  F  F  F  *  L  I  S  A  Q  E  P  N  S  H  L  R  F  C  S  D  L  F  I  R  F  K  F  S  F  F  G  V  D  L  I  H  S  F  H  T  E  I  F  F  C  T  Q  M  C  V  C  V  Y  E  E  I  G  N  R  R  L  *  T  F  P  F  I  I  E  A  I  A  R  F  G  F  L  G  G  G  E  R  I  Q  Y  I  G  L  E  R  D  R  *  R  *  D  P  Q  N  F  C  F  G  G  S  D  G  E  M  S  E  F  G  R  L  N  W  K  R  G  *  E  S  S  N  L  Y  C  G  G  Y  G  G  E  K  D  H  F  L  I  V  L  R  L  P  H  C  V  E  *  R  E  R  *  W  V  P  S  L  I  *  G  S  F  L  F  S  F  V  W  S  F  G  E  L  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50090" stop="49869"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKNYPLKLEEKKTQNNTKIGHYIPSSPFFLFLYSILLISIFFFSSFQLKNQIPTSDSVRIYSSDSNFRFLGLI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="56977" PGL_stop="53535"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="56977" e_stop="56564"/>
            <exon e_start="53828" e_stop="53535"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="56977" e_stop="56564" e_length="414"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="56563" i_stop="53829" i_length="2735"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="53828" e_stop="53535" e_length="294"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56977" stop="56678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285455" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56904" stop="56564"/>
              <exon start="53828" stop="53749"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56894" stop="56564"/>
              <exon start="53828" stop="53714"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336843" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56692" stop="56564"/>
              <exon start="53828" stop="53546"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276365" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56626" stop="56564"/>
              <exon start="53828" stop="53535"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235718" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGTGTCAATAACCCAATGAAGTTACAACAAATACATAACTTCAGCCAAATTCTCGGTGAACTCCATTGATGAAGCTCTCCATTTATCTCTAACATCTATTGCTCAATTTTGCTCACAGTTCAATGGAGTACAACTACAATTCATGGGCCGGAGTACCGCCAAACCCAGCCTTGTACCCTAACCCTTCACCACCGGTGATGATGAATTCCGATCAATCTGTGCCTCAAAACCCTAACCCTAGTTCATATGCACTTGGTTATGGTGGAGGACACGAATTCCAAGGACAAAGTATGGTCTATCGGTATGGACAGATCAATGGTGCTACTAGCTCTGTGGAAGCAACGCAAGTGTATTATCAGGACCCGAATGTGGTGCGACTTTTGGGATCAAATGGCCCTTTCAGGACTGGTGAG : ATAACTGCAGTGTCCCTAAATGGTGCAGAGAATTTGACTCCTGCAAATATAAATCCCAACTTTTTTATCCAACCTCTGAGAAGTGGGTCTTGGGGAGGAGGCCAAAGGAAAATTAAGATGAAGCCTGTATGGTGTCATATTTGCAAAATTGAATTTACTGGCCAAACTGTTCTTGACCAACATATATTAGGCAAAAAACACAAAAGAAGTTTGGATAACTTAAAAGGAGGCAGTGTTATCACAGCTTCTACTTCTGCCCCTCTTGTTACTTCTGTAGCGTCAGAGAACCCATTT</gDNA_template>
            <first_frame> L  C  Q  *  P  N  E  V  T  T  N  T  *  L  Q  P  N  S  R  *  T  P  L  M  K  L  S  I  Y  L  *  H  L  L  L  N  F  A  H  S  S  M  E  Y  N  Y  N  S  W  A  G  V  P  P  N  P  A  L  Y  P  N  P  S  P  P  V  M  M  N  S  D  Q  S  V  P  Q  N  P  N  P  S  S  Y  A  L  G  Y  G  G  G  H  E  F  Q  G  Q  S  M  V  Y  R  Y  G  Q  I  N  G  A  T  S  S  V  E  A  T  Q  V  Y  Y  Q  D  P  N  V  V  R  L  L  G  S  N  G  P  F  R  T  G  E  :  I  T  A  V  S  L  N  G  A  E  N  L  T  P  A  N  I  N  P  N  F  F  I  Q  P  L  R  S  G  S  W  G  G  G  Q  R  K  I  K  M  K  P  V  W  C  H  I  C  K  I  E  F  T  G  Q  T  V  L  D  Q  H  I  L  G  K  K  H  K  R  S  L  D  N  L  K  G  G  S  V  I  T  A  S  T  S  A  P  L  V  T  S  V  A  S  E  N  P  F </first_frame>
            <second_frame>  C  V  N  N  P  M  K  L  Q  Q  I  H  N  F  S  Q  I  L  G  E  L  H  *  *  S  S  P  F  I  S  N  I  Y  C  S  I  L  L  T  V  Q  W  S  T  T  T  I  H  G  P  E  Y  R  Q  T  Q  P  C  T  L  T  L  H  H  R  *  *  *  I  P  I  N  L  C  L  K  T  L  T  L  V  H  M  H  L  V  M  V  E  D  T  N  S  K  D  K  V  W  S  I  G  M  D  R  S  M  V  L  L  A  L  W  K  Q  R  K  C  I  I  R  T  R  M  W  C  D  F  W  D  Q  M  A  L  S  G  L  V  R :   *  L  Q  C  P  *  M  V  Q  R  I  *  L  L  Q  I  *  I  P  T  F  L  S  N  L  *  E  V  G  L  G  E  E  A  K  G  K  L  R  *  S  L  Y  G  V  I  F  A  K  L  N  L  L  A  K  L  F  L  T  N  I  Y  *  A  K  N  T  K  E  V  W  I  T  *  K  E  A  V  L  S  Q  L  L  L  L  P  L  L  L  L  L  *  R  Q  R  T  H   </second_frame>
            <third_frame>   V  S  I  T  Q  *  S  Y  N  K  Y  I  T  S  A  K  F  S  V  N  S  I  D  E  A  L  H  L  S  L  T  S  I  A  Q  F  C  S  Q  F  N  G  V  Q  L  Q  F  M  G  R  S  T  A  K  P  S  L  V  P  *  P  F  T  T  G  D  D  E  F  R  S  I  C  A  S  K  P  *  P  *  F  I  C  T  W  L  W  W  R  T  R  I  P  R  T  K  Y  G  L  S  V  W  T  D  Q  W  C  Y  *  L  C  G  S  N  A  S  V  L  S  G  P  E  C  G  A  T  F  G  I  K  W  P  F  Q  D  W  *   : D  N  C  S  V  P  K  W  C  R  E  F  D  S  C  K  Y  K  S  Q  L  F  Y  P  T  S  E  K  W  V  L  G  R  R  P  K  E  N  *  D  E  A  C  M  V  S  Y  L  Q  N  *  I  Y  W  P  N  C  S  *  P  T  Y  I  R  Q  K  T  Q  K  K  F  G  *  L  K  R  R  Q  C  Y  H  S  F  Y  F  C  P  S  C  Y  F  C  S  V  R  E  P  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="56884" stop="56564"/>
                    <exon start="53828" stop="53535"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>615</number_coding_nucleotides>
                  <number_encoded_amino_acids>205</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HLLLNFAHSSMEYNYNSWAGVPPNPALYPNPSPPVMMNSDQSVPQNPNPSSYALGYGGGHEFQGQSMVYRYGQINGATSSVEATQVYYQDPNVVRLLGSNGPFRTGEITAVSLNGAENLTPANINPNFFIQPLRSGSWGGGQRKIKMKPVWCHICKIEFTGQTVLDQHILGKKHKRSLDNLKGGSVITASTSAPLVTSVASENPF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="61486" PGL_stop="57289"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61438" e_stop="61280"/>
            <exon e_start="60167" e_stop="58378"/>
            <exon e_start="57907" e_stop="57897"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.767" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.546" e_score="0.998"/>
          <exon-only e_score="0.818"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61438" e_stop="61280" e_length="159"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.767">
            <gDNA_intron_boundary i_start="61279" i_stop="60168" i_length="1112"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="60167" e_stop="58378" e_length="1790"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.546">
            <gDNA_intron_boundary i_start="58377" i_stop="57908" i_length="470"/>
          </intron>
          <exon e_serial="3" e_score="0.818">
            <gDNA_exon_boundary e_start="57907" e_stop="57897" e_length="11"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61438" stop="61280"/>
              <exon start="60167" stop="59883"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61353" stop="61280"/>
              <exon start="60167" stop="59681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339557" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61345" stop="61280"/>
              <exon start="60167" stop="59878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61342" stop="61280"/>
              <exon start="60167" stop="59710"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204663" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61322" stop="61280"/>
              <exon start="60167" stop="59769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59926" stop="59522"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325452" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59853" stop="59167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339309" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59777" stop="59386"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59772" stop="58899"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703330" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59701" stop="59393"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59575" stop="59016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59547" stop="59125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59452" stop="59058"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E361518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59431" stop="58827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290453" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59389" stop="58986"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265971" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59334" stop="58823"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324682" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59036" stop="58409"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58956" stop="58511"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58854" stop="58378"/>
              <exon start="57907" stop="57897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237361" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58665" stop="58378"/>
              <exon start="57907" stop="57897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58658" stop="58379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215350" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAGATCTAAGATTTGACACCAAAACAGACTATTTAAGAATGTCCCCGCCTTCTTAGCTCTCATAATTCTCTTCATCTTTTTCCAGATCCATTTTCCCTCTTCTCTCGTGAAACTACGGGTACTCTTTCTCTTCACTCCATTTCTTATTGATTTTGCAG : TTTGGAACAAAGGAAAATGGTTAAGATTTGCTGTATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGTTGTTGATATTTCTGTGCCTCGTATCACAGCCTGGAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTCTTCTTCAGCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTACCAAGACAAGGGGTCTCGGAGCAGGCAAGGCTGCAGATCTAACTTATTGGGAGAGTGCAGCTCGCATGATAGCTGATGTCTCAAAATCTGATAAGATAGTTGTTGAGAAATCAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTCCAGATCCTCTCAAACCCTGAGTTCCTTGCAGAAGGGACCGCTATCGAAGACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGGGAAACTCCAGGGGGGCAGAAGGCTATCCAAGCATTGAAGGATGTTTATGCCCAATGGGTCCCTGAAGAACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAGAGACCCCTGCAATTGATGTTTGCAAGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATCCTCTTCACCTTCAGCCAATGAGTCCAACAACCGTGAAACAAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAGGATGCCCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTTTATATTTGATGGTAGGAATGTTGTGGACGCGGAGAAGCTTAGGGAGATTGGATTTATAGTCTACTCAATTGGTAAGCCTCTGGATGCTTGGCTCAAGGACATGCCAGCTGTTGCTTAATCGCTTTACCTGGCTCGAGTAGTAGCTTGTTCACAAATCAAAGATATTACTTATATGATGCAGTCAGCTGGGATTCTTACCTTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTCATTTACTTGTCTTTGTCAGAGGATTTTGTTTGTTCGATTCAAAAATCTTGCTACCAAACATTTTGGGACAAGTTATAATATATGATATTCATAACTCATGAGTAGTGAGAGAAGAAGATAAATCTTAAATAAT : AAAAATTAAAA</gDNA_template>
            <first_frame> L  D  L  R  F  D  T  K  T  D  Y  L  R  M  S  P  P  S  *  L  S  *  F  S  S  S  F  S  R  S  I  F  P  L  L  S  *  N  Y  G  Y  S  F  S  S  L  H  F  L  L  I  L  Q  :  F  G  T  K  E  N  G  *  D  L  L  Y  R  S  W  I  C  W  G  A  H  H  G  C  H  S  T  Q  M  P  F  Y  *  S  G  C  C  *  Y  F  C  A  S  Y  H  S  L  E  Q  *  Y  T  P  H  I  *  A  R  P  L  *  Y  S  Q  G  V  P  R  Q  E  P  L  L  Q  H  R  C  G  E  T  C  A  G  G  *  Y  R  F  C  F  C  E  Y  S  Y  Q  D  K  G  S  R  S  R  Q  G  C  R  S  N  L  L  G  E  C  S  S  H  D  S  *  C  L  K  I  *  *  D  S  C  *  E  I  N  C  S  C  Q  N  C  R  G  N  *  K  D  F  D  P  Q  Q  Q  G  H  *  L  P  D  P  L  K  P  *  V  P  C  R  R  D  R  Y  R  R  P  F  *  T  *  Q  G  P  N  R  R  S  G  N  S  R  G  A  E  G  Y  P  S  I  E  G  C  L  C  P  M  G  P  *  R  T  H  P  H  H  Q  F  V  V  S  *  A  L  K  I  G  C  Q  C  I  F  G  T  K  N  L  F  C  E  C  H  V  S  S  L  *  G  Y  W  S  K  C  L  T  G  S  V  C  C  W  K  G  L  E  D  W  S  Q  V  P  *  C  Q  C  W  F  W  W  L  L  L  P  E  G  Y  S  E  S  G  L  H  L  *  V  Q  W  S  S  R  G  S  *  I  L  E  T  G  Y  Q  D  Q  *  L  S  E  E  S  F  C  Q  P  R  C  C  L  H  V  Q  H  S  I  R  Q  E  S  R  H  F  R  F  R  F  Q  E  G  Y  W  *  Y  S  R  D  P  C  N  *  C  L  Q  G  T  A  G  G  Q  G  *  F  E  H  I  *  S  S  S  E  *  G  P  N  S  E  R  P  L  N  E  K  V  R  L  G  S  S  S  S  P  S  A  N  E  S  N  N  R  E  T  S  Q  R  C  L  G  C  L  Y  S  N  *  G  C  P  C  C  L  H  P  Y  R  V  G  *  I  *  V  S  R  L  *  E  D  V  *  *  H  A  K  T  C  F  Y  I  *  W  *  E  C  C  G  R  G  E  A  *  G  D  W  I  Y  S  L  L  N  W  *  A  S  G  C  L  A  Q  G  H  A  S  C  C  L  I  A  L  P  G  S  S  S  S  L  F  T  N  Q  R  Y  Y  L  Y  D  A  V  S  W  D  S  Y  L  F  F  L  L  R  S  V  S  V  L  F  Y  P  T  *  A  E  R  P  F  M  V  T  T  R  L  L  M  F  L  L  Y  *  *  Y  H  L  C  H  L  L  V  F  V  R  G  F  C  L  F  D  S  K  I  L  L  P  N  I  L  G  Q  V  I  I  Y  D  I  H  N  S  *  V  V  R  E  E  D  K  S  *  I  I :   K  I  K  </first_frame>
            <second_frame>  *  I  *  D  L  T  P  K  Q  T  I  *  E  C  P  R  L  L  S  S  H  N  S  L  H  L  F  P  D  P  F  S  L  F  S  R  E  T  T  G  T  L  S  L  H  S  I  S  Y  *  F  C  S :   L  E  Q  R  K  M  V  K  I  C  C  I  G  A  G  Y  V  G  G  P  T  M  A  V  I  A  L  K  C  P  S  I  E  V  V  V  V  D  I  S  V  P  R  I  T  A  W  N  S  D  T  L  P  I  Y  E  P  G  L  Y  D  I  V  K  E  C  R  G  R  N  L  F  F  S  T  D  V  E  K  H  V  R  E  A  D  I  V  F  V  S  V  N  T  P  T  K  T  R  G  L  G  A  G  K  A  A  D  L  T  Y  W  E  S  A  A  R  M  I  A  D  V  S  K  S  D  K  I  V  V  E  K  S  T  V  P  V  K  T  A  E  A  I  E  K  I  L  T  H  N  S  K  G  I  N  F  Q  I  L  S  N  P  E  F  L  A  E  G  T  A  I  E  D  L  F  K  P  D  R  V  L  I  G  G  R  E  T  P  G  G  Q  K  A  I  Q  A  L  K  D  V  Y  A  Q  W  V  P  E  E  R  I  L  T  T  N  L  W  S  A  E  L  S  K  L  A  A  N  A  F  L  A  Q  R  I  S  S  V  N  A  M  S  A  L  C  E  A  T  G  A  N  V  S  Q  V  A  Y  A  V  G  K  D  S  R  I  G  P  K  F  L  N  A  S  V  G  F  G  G  S  C  F  Q  K  D  I  L  N  L  V  Y  I  C  E  C  N  G  L  P  E  V  A  E  Y  W  K  Q  V  I  K  I  N  D  Y  Q  K  N  R  F  V  N  R  V  V  A  S  M  F  N  T  V  S  G  K  K  V  A  I  L  G  F  A  F  K  K  D  T  G  D  T  R  E  T  P  A  I  D  V  C  K  G  L  L  G  D  K  A  N  L  S  I  Y  D  P  Q  V  S  E  D  Q  I  Q  R  D  L  S  M  K  K  F  D  W  D  H  P  L  H  L  Q  P  M  S  P  T  T  V  K  Q  V  S  V  V  W  D  A  Y  T  A  T  K  D  A  H  A  V  C  I  L  T  E  W  D  E  F  K  S  L  D  Y  K  K  M  Y  D  S  M  Q  K  P  A  F  I  F  D  G  R  N  V  V  D  A  E  K  L  R  E  I  G  F  I  V  Y  S  I  G  K  P  L  D  A  W  L  K  D  M  P  A  V  A  *  S  L  Y  L  A  R  V  V  A  C  S  Q  I  K  D  I  T  Y  M  M  Q  S  A  G  I  L  T  F  F  F  Y  Y  V  Q  F  L  F  C  F  I  P  L  R  L  K  D  H  S  W  S  L  P  D  S  *  C  F  F  C  I  D  D  I  T  F  V  I  Y  L  S  L  S  E  D  F  V  C  S  I  Q  K  S  C  Y  Q  T  F  W  D  K  L  *  Y  M  I  F  I  T  H  E  *  *  E  K  K  I  N  L  K  *   : *  K  L  K </second_frame>
            <third_frame>   R  S  K  I  *  H  Q  N  R  L  F  K  N  V  P  A  F  L  A  L  I  I  L  F  I  F  F  Q  I  H  F  P  S  S  L  V  K  L  R  V  L  F  L  F  T  P  F  L  I  D  F  A   : V  W  N  K  G  K  W  L  R  F  A  V  *  E  L  D  M  L  G  G  P  P  W  L  S  *  H  S  N  A  L  L  L  K  W  L  L  L  I  F  L  C  L  V  S  Q  P  G  T  V  I  H  S  P  Y  M  S  Q  A  S  M  I  *  S  R  S  A  E  A  G  T  S  S  S  A  Q  M  W  R  N  M  C  G  R  L  I  S  F  L  F  L  *  I  L  L  P  R  Q  G  V  S  E  Q  A  R  L  Q  I  *  L  I  G  R  V  Q  L  A  *  *  L  M  S  Q  N  L  I  R  *  L  L  R  N  Q  L  F  L  S  K  L  P  R  Q  L  K  R  F  *  P  T  T  A  R  A  L  T  S  R  S  S  Q  T  L  S  S  L  Q  K  G  P  L  S  K  T  F  L  N  L  T  G  S  *  S  E  V  G  K  L  Q  G  G  R  R  L  S  K  H  *  R  M  F  M  P  N  G  S  L  K  N  A  S  S  P  P  I  C  G  Q  L  S  S  Q  N  W  L  P  M  H  F  W  H  K  E  S  L  L  *  M  P  C  Q  L  F  V  R  L  L  E  Q  M  S  H  R  *  R  M  L  L  E  R  T  R  G  L  V  P  S  S  L  M  P  V  L  V  L  V  A  L  A  S  R  R  I  F  *  I  W  F  T  F  V  S  A  M  V  F  Q  R  *  L  N  T  G  N  R  L  S  R  S  M  T  I  R  R  I  V  L  S  T  A  L  L  P  P  C  S  T  Q  Y  Q  A  R  K  S  P  F  *  V  S  L  S  R  R  I  L  V  I  L  E  R  P  L  Q  L  M  F  A  R  D  C  W  G  T  R  L  I  *  A  Y  M  I  L  K  *  V  R  T  K  F  R  E  T  S  Q  *  K  S  S  I  G  I  I  L  F  T  F  S  Q  *  V  Q  Q  P  *  N  K  S  A  L  F  G  M  P  I  Q  Q  L  R  M  P  M  L  S  A  S  L  Q  S  G  M  N  L  S  L  S  T  I  R  R  C  M  I  A  C  K  N  L  L  L  Y  L  M  V  G  M  L  W  T  R  R  S  L  G  R  L  D  L  *  S  T  Q  L  V  S  L  W  M  L  G  S  R  T  C  Q  L  L  L  N  R  F  T  W  L  E  *  *  L  V  H  K  S  K  I  L  L  I  *  C  S  Q  L  G  F  L  P  F  F  F  T  T  F  S  F  C  F  V  L  S  H  L  G  *  K  T  I  H  G  H  Y  Q  T  L  N  V  S  F  V  L  M  I  S  P  L  S  F  T  C  L  C  Q  R  I  L  F  V  R  F  K  N  L  A  T  K  H  F  G  T  S  Y  N  I  *  Y  S  *  L  M  S  S  E  R  R  R  *  I  L  N  N  :  K  N  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61287" stop="61280"/>
                    <exon start="60167" stop="58709"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1464</number_coding_nucleotides>
                  <number_encoded_amino_acids>488</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FCSLEQRKMVKICCIGAGYVGGPTMAVIALKCPSIEVVVVDISVPRITAWNSDTLPIYEPGLYDIVKECRGRNLFFSTDVEKHVREADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGINFQILSNPEFLAEGTAIEDLFKPDRVLIGGRETPGGQKAIQALKDVYAQWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAYAVGKDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKNRFVNRVVASMFNTVSGKKVAILGFAFKKDTGDTRETPAIDVCKGLLGDKANLSIYDPQVSEDQIQRDLSMKKFDWDHPLHLQPMSPTTVKQVSVVWDAYTATKDAHAVCILTEWDEFKSLDYKKMYDSMQKPAFIFDGRNVVDAEKLREIGFIVYSIGKPLDAWLKDMPAVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="61438" e_stop="61280"/>
            <exon e_start="60167" e_stop="58507"/>
            <exon e_start="57907" e_stop="57875"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.767" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.546" e_score="0.998"/>
          <exon-only e_score="0.636"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61438" e_stop="61280" e_length="159"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.767">
            <gDNA_intron_boundary i_start="61279" i_stop="60168" i_length="1112"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="60167" e_stop="58507" e_length="1661"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.546">
            <gDNA_intron_boundary i_start="58506" i_stop="57908" i_length="599"/>
          </intron>
          <exon e_serial="3" e_score="0.636">
            <gDNA_exon_boundary e_start="57907" e_stop="57875" e_length="33"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61438" stop="61280"/>
              <exon start="60167" stop="59883"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61353" stop="61280"/>
              <exon start="60167" stop="59681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339557" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61345" stop="61280"/>
              <exon start="60167" stop="59878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61342" stop="61280"/>
              <exon start="60167" stop="59710"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204663" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61322" stop="61280"/>
              <exon start="60167" stop="59769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59926" stop="59522"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325452" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59853" stop="59167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339309" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59777" stop="59386"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59772" stop="58899"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703330" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59701" stop="59393"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59575" stop="59016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59547" stop="59125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59452" stop="59058"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E361518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59431" stop="58827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290453" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59389" stop="58986"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265971" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59334" stop="58823"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324682" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58956" stop="58511"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58917" stop="58507"/>
              <exon start="57907" stop="57875"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711966" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAGATCTAAGATTTGACACCAAAACAGACTATTTAAGAATGTCCCCGCCTTCTTAGCTCTCATAATTCTCTTCATCTTTTTCCAGATCCATTTTCCCTCTTCTCTCGTGAAACTACGGGTACTCTTTCTCTTCACTCCATTTCTTATTGATTTTGCAG : TTTGGAACAAAGGAAAATGGTTAAGATTTGCTGTATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGTTGTTGATATTTCTGTGCCTCGTATCACAGCCTGGAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTCTTCTTCAGCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTACCAAGACAAGGGGTCTCGGAGCAGGCAAGGCTGCAGATCTAACTTATTGGGAGAGTGCAGCTCGCATGATAGCTGATGTCTCAAAATCTGATAAGATAGTTGTTGAGAAATCAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTCCAGATCCTCTCAAACCCTGAGTTCCTTGCAGAAGGGACCGCTATCGAAGACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGGGAAACTCCAGGGGGGCAGAAGGCTATCCAAGCATTGAAGGATGTTTATGCCCAATGGGTCCCTGAAGAACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAGAGACCCCTGCAATTGATGTTTGCAAGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATCCTCTTCACCTTCAGCCAATGAGTCCAACAACCGTGAAACAAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAGGATGCCCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTTTATATTTGATGGTAGGAATGTTGTGGACGCGGAGAAGCTTAGGGAGATTGGATTTATAGTCTACTCAATTGGTAAGCCTCTGGATGCTTGGCTCAAGGACATGCCAGCTGTTGCTTAATCGCTTTACCTGGCTCGAGTAGTAGCTTGTTCACAAATCAAAGATATTACTTATATGATGCAGTCAGCTGGGATTCTTACCTTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTCATTT : AAAAATTAAAATTCGACAAGTAGAAAAGAACAA</gDNA_template>
            <first_frame> L  D  L  R  F  D  T  K  T  D  Y  L  R  M  S  P  P  S  *  L  S  *  F  S  S  S  F  S  R  S  I  F  P  L  L  S  *  N  Y  G  Y  S  F  S  S  L  H  F  L  L  I  L  Q  :  F  G  T  K  E  N  G  *  D  L  L  Y  R  S  W  I  C  W  G  A  H  H  G  C  H  S  T  Q  M  P  F  Y  *  S  G  C  C  *  Y  F  C  A  S  Y  H  S  L  E  Q  *  Y  T  P  H  I  *  A  R  P  L  *  Y  S  Q  G  V  P  R  Q  E  P  L  L  Q  H  R  C  G  E  T  C  A  G  G  *  Y  R  F  C  F  C  E  Y  S  Y  Q  D  K  G  S  R  S  R  Q  G  C  R  S  N  L  L  G  E  C  S  S  H  D  S  *  C  L  K  I  *  *  D  S  C  *  E  I  N  C  S  C  Q  N  C  R  G  N  *  K  D  F  D  P  Q  Q  Q  G  H  *  L  P  D  P  L  K  P  *  V  P  C  R  R  D  R  Y  R  R  P  F  *  T  *  Q  G  P  N  R  R  S  G  N  S  R  G  A  E  G  Y  P  S  I  E  G  C  L  C  P  M  G  P  *  R  T  H  P  H  H  Q  F  V  V  S  *  A  L  K  I  G  C  Q  C  I  F  G  T  K  N  L  F  C  E  C  H  V  S  S  L  *  G  Y  W  S  K  C  L  T  G  S  V  C  C  W  K  G  L  E  D  W  S  Q  V  P  *  C  Q  C  W  F  W  W  L  L  L  P  E  G  Y  S  E  S  G  L  H  L  *  V  Q  W  S  S  R  G  S  *  I  L  E  T  G  Y  Q  D  Q  *  L  S  E  E  S  F  C  Q  P  R  C  C  L  H  V  Q  H  S  I  R  Q  E  S  R  H  F  R  F  R  F  Q  E  G  Y  W  *  Y  S  R  D  P  C  N  *  C  L  Q  G  T  A  G  G  Q  G  *  F  E  H  I  *  S  S  S  E  *  G  P  N  S  E  R  P  L  N  E  K  V  R  L  G  S  S  S  S  P  S  A  N  E  S  N  N  R  E  T  S  Q  R  C  L  G  C  L  Y  S  N  *  G  C  P  C  C  L  H  P  Y  R  V  G  *  I  *  V  S  R  L  *  E  D  V  *  *  H  A  K  T  C  F  Y  I  *  W  *  E  C  C  G  R  G  E  A  *  G  D  W  I  Y  S  L  L  N  W  *  A  S  G  C  L  A  Q  G  H  A  S  C  C  L  I  A  L  P  G  S  S  S  S  L  F  T  N  Q  R  Y  Y  L  Y  D  A  V  S  W  D  S  Y  L  F  F  L  L  R  S  V  S  V  L  F  Y  P  T  *  A  E  R  P  F  M  V  T  T  R  L  L  M  F  L  L  Y  *  *  Y  H  L  C  H  L :   K  I  K  I  R  Q  V  E  K  N   </first_frame>
            <second_frame>  *  I  *  D  L  T  P  K  Q  T  I  *  E  C  P  R  L  L  S  S  H  N  S  L  H  L  F  P  D  P  F  S  L  F  S  R  E  T  T  G  T  L  S  L  H  S  I  S  Y  *  F  C  S :   L  E  Q  R  K  M  V  K  I  C  C  I  G  A  G  Y  V  G  G  P  T  M  A  V  I  A  L  K  C  P  S  I  E  V  V  V  V  D  I  S  V  P  R  I  T  A  W  N  S  D  T  L  P  I  Y  E  P  G  L  Y  D  I  V  K  E  C  R  G  R  N  L  F  F  S  T  D  V  E  K  H  V  R  E  A  D  I  V  F  V  S  V  N  T  P  T  K  T  R  G  L  G  A  G  K  A  A  D  L  T  Y  W  E  S  A  A  R  M  I  A  D  V  S  K  S  D  K  I  V  V  E  K  S  T  V  P  V  K  T  A  E  A  I  E  K  I  L  T  H  N  S  K  G  I  N  F  Q  I  L  S  N  P  E  F  L  A  E  G  T  A  I  E  D  L  F  K  P  D  R  V  L  I  G  G  R  E  T  P  G  G  Q  K  A  I  Q  A  L  K  D  V  Y  A  Q  W  V  P  E  E  R  I  L  T  T  N  L  W  S  A  E  L  S  K  L  A  A  N  A  F  L  A  Q  R  I  S  S  V  N  A  M  S  A  L  C  E  A  T  G  A  N  V  S  Q  V  A  Y  A  V  G  K  D  S  R  I  G  P  K  F  L  N  A  S  V  G  F  G  G  S  C  F  Q  K  D  I  L  N  L  V  Y  I  C  E  C  N  G  L  P  E  V  A  E  Y  W  K  Q  V  I  K  I  N  D  Y  Q  K  N  R  F  V  N  R  V  V  A  S  M  F  N  T  V  S  G  K  K  V  A  I  L  G  F  A  F  K  K  D  T  G  D  T  R  E  T  P  A  I  D  V  C  K  G  L  L  G  D  K  A  N  L  S  I  Y  D  P  Q  V  S  E  D  Q  I  Q  R  D  L  S  M  K  K  F  D  W  D  H  P  L  H  L  Q  P  M  S  P  T  T  V  K  Q  V  S  V  V  W  D  A  Y  T  A  T  K  D  A  H  A  V  C  I  L  T  E  W  D  E  F  K  S  L  D  Y  K  K  M  Y  D  S  M  Q  K  P  A  F  I  F  D  G  R  N  V  V  D  A  E  K  L  R  E  I  G  F  I  V  Y  S  I  G  K  P  L  D  A  W  L  K  D  M  P  A  V  A  *  S  L  Y  L  A  R  V  V  A  C  S  Q  I  K  D  I  T  Y  M  M  Q  S  A  G  I  L  T  F  F  F  Y  Y  V  Q  F  L  F  C  F  I  P  L  R  L  K  D  H  S  W  S  L  P  D  S  *  C  F  F  C  I  D  D  I  T  F  V  I   : *  K  L  K  F  D  K  *  K  R  T  </second_frame>
            <third_frame>   R  S  K  I  *  H  Q  N  R  L  F  K  N  V  P  A  F  L  A  L  I  I  L  F  I  F  F  Q  I  H  F  P  S  S  L  V  K  L  R  V  L  F  L  F  T  P  F  L  I  D  F  A   : V  W  N  K  G  K  W  L  R  F  A  V  *  E  L  D  M  L  G  G  P  P  W  L  S  *  H  S  N  A  L  L  L  K  W  L  L  L  I  F  L  C  L  V  S  Q  P  G  T  V  I  H  S  P  Y  M  S  Q  A  S  M  I  *  S  R  S  A  E  A  G  T  S  S  S  A  Q  M  W  R  N  M  C  G  R  L  I  S  F  L  F  L  *  I  L  L  P  R  Q  G  V  S  E  Q  A  R  L  Q  I  *  L  I  G  R  V  Q  L  A  *  *  L  M  S  Q  N  L  I  R  *  L  L  R  N  Q  L  F  L  S  K  L  P  R  Q  L  K  R  F  *  P  T  T  A  R  A  L  T  S  R  S  S  Q  T  L  S  S  L  Q  K  G  P  L  S  K  T  F  L  N  L  T  G  S  *  S  E  V  G  K  L  Q  G  G  R  R  L  S  K  H  *  R  M  F  M  P  N  G  S  L  K  N  A  S  S  P  P  I  C  G  Q  L  S  S  Q  N  W  L  P  M  H  F  W  H  K  E  S  L  L  *  M  P  C  Q  L  F  V  R  L  L  E  Q  M  S  H  R  *  R  M  L  L  E  R  T  R  G  L  V  P  S  S  L  M  P  V  L  V  L  V  A  L  A  S  R  R  I  F  *  I  W  F  T  F  V  S  A  M  V  F  Q  R  *  L  N  T  G  N  R  L  S  R  S  M  T  I  R  R  I  V  L  S  T  A  L  L  P  P  C  S  T  Q  Y  Q  A  R  K  S  P  F  *  V  S  L  S  R  R  I  L  V  I  L  E  R  P  L  Q  L  M  F  A  R  D  C  W  G  T  R  L  I  *  A  Y  M  I  L  K  *  V  R  T  K  F  R  E  T  S  Q  *  K  S  S  I  G  I  I  L  F  T  F  S  Q  *  V  Q  Q  P  *  N  K  S  A  L  F  G  M  P  I  Q  Q  L  R  M  P  M  L  S  A  S  L  Q  S  G  M  N  L  S  L  S  T  I  R  R  C  M  I  A  C  K  N  L  L  L  Y  L  M  V  G  M  L  W  T  R  R  S  L  G  R  L  D  L  *  S  T  Q  L  V  S  L  W  M  L  G  S  R  T  C  Q  L  L  L  N  R  F  T  W  L  E  *  *  L  V  H  K  S  K  I  L  L  I  *  C  S  Q  L  G  F  L  P  F  F  F  T  T  F  S  F  C  F  V  L  S  H  L  G  *  K  T  I  H  G  H  Y  Q  T  L  N  V  S  F  V  L  M  I  S  P  L  S  F  :  K  N  *  N  S  T  S  R  K  E  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61287" stop="61280"/>
                    <exon start="60167" stop="58709"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1464</number_coding_nucleotides>
                  <number_encoded_amino_acids>488</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FCSLEQRKMVKICCIGAGYVGGPTMAVIALKCPSIEVVVVDISVPRITAWNSDTLPIYEPGLYDIVKECRGRNLFFSTDVEKHVREADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGINFQILSNPEFLAEGTAIEDLFKPDRVLIGGRETPGGQKAIQALKDVYAQWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAYAVGKDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKNRFVNRVVASMFNTVSGKKVAILGFAFKKDTGDTRETPAIDVCKGLLGDKANLSIYDPQVSEDQIQRDLSMKKFDWDHPLHLQPMSPTTVKQVSVVWDAYTATKDAHAVCILTEWDEFKSLDYKKMYDSMQKPAFIFDGRNVVDAEKLREIGFIVYSIGKPLDAWLKDMPAVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="61438" e_stop="61280"/>
            <exon e_start="60167" e_stop="58511"/>
            <exon e_start="57329" e_stop="57289"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.767" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.887" e_score="0.998"/>
          <exon-only e_score="0.659"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61438" e_stop="61280" e_length="159"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.767">
            <gDNA_intron_boundary i_start="61279" i_stop="60168" i_length="1112"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="60167" e_stop="58511" e_length="1657"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.887">
            <gDNA_intron_boundary i_start="58510" i_stop="57330" i_length="1181"/>
          </intron>
          <exon e_serial="3" e_score="0.659">
            <gDNA_exon_boundary e_start="57329" e_stop="57289" e_length="41"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61438" stop="61280"/>
              <exon start="60167" stop="59883"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322179" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61353" stop="61280"/>
              <exon start="60167" stop="59681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339557" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61345" stop="61280"/>
              <exon start="60167" stop="59878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61342" stop="61280"/>
              <exon start="60167" stop="59710"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204663" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61322" stop="61280"/>
              <exon start="60167" stop="59769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59926" stop="59522"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325452" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59853" stop="59167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339309" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59777" stop="59386"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59772" stop="58899"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703330" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59701" stop="59393"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59575" stop="59016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59547" stop="59125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59452" stop="59058"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E361518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59431" stop="58827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290453" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59389" stop="58986"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265971" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59334" stop="58823"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324682" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59100" stop="58511"/>
              <exon start="57329" stop="57289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327494" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58956" stop="58511"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350100" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAGATCTAAGATTTGACACCAAAACAGACTATTTAAGAATGTCCCCGCCTTCTTAGCTCTCATAATTCTCTTCATCTTTTTCCAGATCCATTTTCCCTCTTCTCTCGTGAAACTACGGGTACTCTTTCTCTTCACTCCATTTCTTATTGATTTTGCAG : TTTGGAACAAAGGAAAATGGTTAAGATTTGCTGTATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGTTGTTGATATTTCTGTGCCTCGTATCACAGCCTGGAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTCTTCTTCAGCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTACCAAGACAAGGGGTCTCGGAGCAGGCAAGGCTGCAGATCTAACTTATTGGGAGAGTGCAGCTCGCATGATAGCTGATGTCTCAAAATCTGATAAGATAGTTGTTGAGAAATCAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTCCAGATCCTCTCAAACCCTGAGTTCCTTGCAGAAGGGACCGCTATCGAAGACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGGGAAACTCCAGGGGGGCAGAAGGCTATCCAAGCATTGAAGGATGTTTATGCCCAATGGGTCCCTGAAGAACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAGAGACCCCTGCAATTGATGTTTGCAAGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATCCTCTTCACCTTCAGCCAATGAGTCCAACAACCGTGAAACAAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAGGATGCCCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTTTATATTTGATGGTAGGAATGTTGTGGACGCGGAGAAGCTTAGGGAGATTGGATTTATAGTCTACTCAATTGGTAAGCCTCTGGATGCTTGGCTCAAGGACATGCCAGCTGTTGCTTAATCGCTTTACCTGGCTCGAGTAGTAGCTTGTTCACAAATCAAAGATATTACTTATATGATGCAGTCAGCTGGGATTCTTACCTTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTC : GTTTAGAGAAAAAAAAATCAAACAAATTCTTAAAGTCAGCT</gDNA_template>
            <first_frame> L  D  L  R  F  D  T  K  T  D  Y  L  R  M  S  P  P  S  *  L  S  *  F  S  S  S  F  S  R  S  I  F  P  L  L  S  *  N  Y  G  Y  S  F  S  S  L  H  F  L  L  I  L  Q  :  F  G  T  K  E  N  G  *  D  L  L  Y  R  S  W  I  C  W  G  A  H  H  G  C  H  S  T  Q  M  P  F  Y  *  S  G  C  C  *  Y  F  C  A  S  Y  H  S  L  E  Q  *  Y  T  P  H  I  *  A  R  P  L  *  Y  S  Q  G  V  P  R  Q  E  P  L  L  Q  H  R  C  G  E  T  C  A  G  G  *  Y  R  F  C  F  C  E  Y  S  Y  Q  D  K  G  S  R  S  R  Q  G  C  R  S  N  L  L  G  E  C  S  S  H  D  S  *  C  L  K  I  *  *  D  S  C  *  E  I  N  C  S  C  Q  N  C  R  G  N  *  K  D  F  D  P  Q  Q  Q  G  H  *  L  P  D  P  L  K  P  *  V  P  C  R  R  D  R  Y  R  R  P  F  *  T  *  Q  G  P  N  R  R  S  G  N  S  R  G  A  E  G  Y  P  S  I  E  G  C  L  C  P  M  G  P  *  R  T  H  P  H  H  Q  F  V  V  S  *  A  L  K  I  G  C  Q  C  I  F  G  T  K  N  L  F  C  E  C  H  V  S  S  L  *  G  Y  W  S  K  C  L  T  G  S  V  C  C  W  K  G  L  E  D  W  S  Q  V  P  *  C  Q  C  W  F  W  W  L  L  L  P  E  G  Y  S  E  S  G  L  H  L  *  V  Q  W  S  S  R  G  S  *  I  L  E  T  G  Y  Q  D  Q  *  L  S  E  E  S  F  C  Q  P  R  C  C  L  H  V  Q  H  S  I  R  Q  E  S  R  H  F  R  F  R  F  Q  E  G  Y  W  *  Y  S  R  D  P  C  N  *  C  L  Q  G  T  A  G  G  Q  G  *  F  E  H  I  *  S  S  S  E  *  G  P  N  S  E  R  P  L  N  E  K  V  R  L  G  S  S  S  S  P  S  A  N  E  S  N  N  R  E  T  S  Q  R  C  L  G  C  L  Y  S  N  *  G  C  P  C  C  L  H  P  Y  R  V  G  *  I  *  V  S  R  L  *  E  D  V  *  *  H  A  K  T  C  F  Y  I  *  W  *  E  C  C  G  R  G  E  A  *  G  D  W  I  Y  S  L  L  N  W  *  A  S  G  C  L  A  Q  G  H  A  S  C  C  L  I  A  L  P  G  S  S  S  S  L  F  T  N  Q  R  Y  Y  L  Y  D  A  V  S  W  D  S  Y  L  F  F  L  L  R  S  V  S  V  L  F  Y  P  T  *  A  E  R  P  F  M  V  T  T  R  L  L  M  F  L  L  Y  *  *  Y  H  L  C   : R  L  E  K  K  K  S  N  K  F  L  K  S  A </first_frame>
            <second_frame>  *  I  *  D  L  T  P  K  Q  T  I  *  E  C  P  R  L  L  S  S  H  N  S  L  H  L  F  P  D  P  F  S  L  F  S  R  E  T  T  G  T  L  S  L  H  S  I  S  Y  *  F  C  S :   L  E  Q  R  K  M  V  K  I  C  C  I  G  A  G  Y  V  G  G  P  T  M  A  V  I  A  L  K  C  P  S  I  E  V  V  V  V  D  I  S  V  P  R  I  T  A  W  N  S  D  T  L  P  I  Y  E  P  G  L  Y  D  I  V  K  E  C  R  G  R  N  L  F  F  S  T  D  V  E  K  H  V  R  E  A  D  I  V  F  V  S  V  N  T  P  T  K  T  R  G  L  G  A  G  K  A  A  D  L  T  Y  W  E  S  A  A  R  M  I  A  D  V  S  K  S  D  K  I  V  V  E  K  S  T  V  P  V  K  T  A  E  A  I  E  K  I  L  T  H  N  S  K  G  I  N  F  Q  I  L  S  N  P  E  F  L  A  E  G  T  A  I  E  D  L  F  K  P  D  R  V  L  I  G  G  R  E  T  P  G  G  Q  K  A  I  Q  A  L  K  D  V  Y  A  Q  W  V  P  E  E  R  I  L  T  T  N  L  W  S  A  E  L  S  K  L  A  A  N  A  F  L  A  Q  R  I  S  S  V  N  A  M  S  A  L  C  E  A  T  G  A  N  V  S  Q  V  A  Y  A  V  G  K  D  S  R  I  G  P  K  F  L  N  A  S  V  G  F  G  G  S  C  F  Q  K  D  I  L  N  L  V  Y  I  C  E  C  N  G  L  P  E  V  A  E  Y  W  K  Q  V  I  K  I  N  D  Y  Q  K  N  R  F  V  N  R  V  V  A  S  M  F  N  T  V  S  G  K  K  V  A  I  L  G  F  A  F  K  K  D  T  G  D  T  R  E  T  P  A  I  D  V  C  K  G  L  L  G  D  K  A  N  L  S  I  Y  D  P  Q  V  S  E  D  Q  I  Q  R  D  L  S  M  K  K  F  D  W  D  H  P  L  H  L  Q  P  M  S  P  T  T  V  K  Q  V  S  V  V  W  D  A  Y  T  A  T  K  D  A  H  A  V  C  I  L  T  E  W  D  E  F  K  S  L  D  Y  K  K  M  Y  D  S  M  Q  K  P  A  F  I  F  D  G  R  N  V  V  D  A  E  K  L  R  E  I  G  F  I  V  Y  S  I  G  K  P  L  D  A  W  L  K  D  M  P  A  V  A  *  S  L  Y  L  A  R  V  V  A  C  S  Q  I  K  D  I  T  Y  M  M  Q  S  A  G  I  L  T  F  F  F  Y  Y  V  Q  F  L  F  C  F  I  P  L  R  L  K  D  H  S  W  S  L  P  D  S  *  C  F  F  C  I  D  D  I  T  F  V  :  V  *  R  K  K  N  Q  T  N  S  *  S  Q   </second_frame>
            <third_frame>   R  S  K  I  *  H  Q  N  R  L  F  K  N  V  P  A  F  L  A  L  I  I  L  F  I  F  F  Q  I  H  F  P  S  S  L  V  K  L  R  V  L  F  L  F  T  P  F  L  I  D  F  A   : V  W  N  K  G  K  W  L  R  F  A  V  *  E  L  D  M  L  G  G  P  P  W  L  S  *  H  S  N  A  L  L  L  K  W  L  L  L  I  F  L  C  L  V  S  Q  P  G  T  V  I  H  S  P  Y  M  S  Q  A  S  M  I  *  S  R  S  A  E  A  G  T  S  S  S  A  Q  M  W  R  N  M  C  G  R  L  I  S  F  L  F  L  *  I  L  L  P  R  Q  G  V  S  E  Q  A  R  L  Q  I  *  L  I  G  R  V  Q  L  A  *  *  L  M  S  Q  N  L  I  R  *  L  L  R  N  Q  L  F  L  S  K  L  P  R  Q  L  K  R  F  *  P  T  T  A  R  A  L  T  S  R  S  S  Q  T  L  S  S  L  Q  K  G  P  L  S  K  T  F  L  N  L  T  G  S  *  S  E  V  G  K  L  Q  G  G  R  R  L  S  K  H  *  R  M  F  M  P  N  G  S  L  K  N  A  S  S  P  P  I  C  G  Q  L  S  S  Q  N  W  L  P  M  H  F  W  H  K  E  S  L  L  *  M  P  C  Q  L  F  V  R  L  L  E  Q  M  S  H  R  *  R  M  L  L  E  R  T  R  G  L  V  P  S  S  L  M  P  V  L  V  L  V  A  L  A  S  R  R  I  F  *  I  W  F  T  F  V  S  A  M  V  F  Q  R  *  L  N  T  G  N  R  L  S  R  S  M  T  I  R  R  I  V  L  S  T  A  L  L  P  P  C  S  T  Q  Y  Q  A  R  K  S  P  F  *  V  S  L  S  R  R  I  L  V  I  L  E  R  P  L  Q  L  M  F  A  R  D  C  W  G  T  R  L  I  *  A  Y  M  I  L  K  *  V  R  T  K  F  R  E  T  S  Q  *  K  S  S  I  G  I  I  L  F  T  F  S  Q  *  V  Q  Q  P  *  N  K  S  A  L  F  G  M  P  I  Q  Q  L  R  M  P  M  L  S  A  S  L  Q  S  G  M  N  L  S  L  S  T  I  R  R  C  M  I  A  C  K  N  L  L  L  Y  L  M  V  G  M  L  W  T  R  R  S  L  G  R  L  D  L  *  S  T  Q  L  V  S  L  W  M  L  G  S  R  T  C  Q  L  L  L  N  R  F  T  W  L  E  *  *  L  V  H  K  S  K  I  L  L  I  *  C  S  Q  L  G  F  L  P  F  F  F  T  T  F  S  F  C  F  V  L  S  H  L  G  *  K  T  I  H  G  H  Y  Q  T  L  N  V  S  F  V  L  M  I  S  P  L  S :   F  R  E  K  K  I  K  Q  I  L  K  V  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61287" stop="61280"/>
                    <exon start="60167" stop="58709"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1464</number_coding_nucleotides>
                  <number_encoded_amino_acids>488</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FCSLEQRKMVKICCIGAGYVGGPTMAVIALKCPSIEVVVVDISVPRITAWNSDTLPIYEPGLYDIVKECRGRNLFFSTDVEKHVREADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGINFQILSNPEFLAEGTAIEDLFKPDRVLIGGRETPGGQKAIQALKDVYAQWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAYAVGKDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKNRFVNRVVASMFNTVSGKKVAILGFAFKKDTGDTRETPAIDVCKGLLGDKANLSIYDPQVSEDQIQRDLSMKKFDWDHPLHLQPMSPTTVKQVSVVWDAYTATKDAHAVCILTEWDEFKSLDYKKMYDSMQKPAFIFDGRNVVDAEKLREIGFIVYSIGKPLDAWLKDMPAVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="61486" e_stop="61320"/>
            <exon e_start="60167" e_stop="58378"/>
            <exon e_start="57907" e_stop="57897"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.767" e_score="0.994"/>
          <exon-intron don_prob="0.000" acc_prob="0.546" e_score="0.998"/>
          <exon-only e_score="0.818"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="61486" e_stop="61320" e_length="167"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.767">
            <gDNA_intron_boundary i_start="61319" i_stop="60168" i_length="1152"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="60167" e_stop="58378" e_length="1790"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.546">
            <gDNA_intron_boundary i_start="58377" i_stop="57908" i_length="470"/>
          </intron>
          <exon e_serial="3" e_score="0.818">
            <gDNA_exon_boundary e_start="57907" e_stop="57897" e_length="11"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61486" stop="61320"/>
              <exon start="60167" stop="58511"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61362" stop="61320"/>
              <exon start="60167" stop="59601"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724430" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59926" stop="59522"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325452" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59853" stop="59167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339309" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59777" stop="59386"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59772" stop="58899"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703330" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59701" stop="59393"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59575" stop="59016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59547" stop="59125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319519" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59452" stop="59058"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E361518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59431" stop="58827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290453" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59389" stop="58986"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265971" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59334" stop="58823"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324682" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59036" stop="58409"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58956" stop="58511"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350100" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58854" stop="58378"/>
              <exon start="57907" stop="57897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237361" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58665" stop="58378"/>
              <exon start="57907" stop="57897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58658" stop="58379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E215350" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGCTTCAAGAAGACTCGTCATTCGTCAAGCTCTGCTGCAGCGTTGGGTTAGATCTAAGATTTGACACCAAAACAGACTATTTAAGAATGTCCCCGCCTTCTTAGCTCTCATAATTCTCTTCATCTTTTTCCAGATCCATTTTCCCTCTTCTCTCGTGAAACTACGG : TTTGGAACAAAGGAAAATGGTTAAGATTTGCTGTATAGGAGCTGGATATGTTGGGGGGCCCACCATGGCTGTCATAGCACTCAAATGCCCTTCTATTGAAGTGGTTGTTGTTGATATTTCTGTGCCTCGTATCACAGCCTGGAACAGTGATACACTCCCCATATATGAGCCAGGCCTCTATGATATAGTCAAGGAGTGCCGAGGCAGGAACCTCTTCTTCAGCACAGATGTGGAGAAACATGTGCGGGAGGCTGATATCGTTTTTGTTTCTGTGAATACTCCTACCAAGACAAGGGGTCTCGGAGCAGGCAAGGCTGCAGATCTAACTTATTGGGAGAGTGCAGCTCGCATGATAGCTGATGTCTCAAAATCTGATAAGATAGTTGTTGAGAAATCAACTGTTCCTGTCAAAACTGCCGAGGCAATTGAAAAGATTTTGACCCACAACAGCAAGGGCATTAACTTCCAGATCCTCTCAAACCCTGAGTTCCTTGCAGAAGGGACCGCTATCGAAGACCTTTTTAAACCTGACAGGGTCCTAATCGGAGGTCGGGAAACTCCAGGGGGGCAGAAGGCTATCCAAGCATTGAAGGATGTTTATGCCCAATGGGTCCCTGAAGAACGCATCCTCACCACCAATTTGTGGTCAGCTGAGCTCTCAAAATTGGCTGCCAATGCATTTTTGGCACAAAGAATCTCTTCTGTGAATGCCATGTCAGCTCTTTGTGAGGCTACTGGAGCAAATGTCTCACAGGTAGCGTATGCTGTTGGAAAGGACTCGAGGATTGGTCCCAAGTTCCTTAATGCCAGTGTTGGTTTTGGTGGCTCTTGCTTCCAGAAGGATATTCTGAATCTGGTTTACATTTGTGAGTGCAATGGTCTTCCAGAGGTAGCTGAATACTGGAAACAGGTTATCAAGATCAATGACTATCAGAAGAATCGTTTTGTCAACCGCGTTGTTGCCTCCATGTTCAACACAGTATCAGGCAAGAAAGTCGCCATTTTAGGTTTCGCTTTCAAGAAGGATACTGGTGATACTCGAGAGACCCCTGCAATTGATGTTTGCAAGGGACTGCTGGGGGACAAGGCTAATTTGAGCATATATGATCCTCAAGTGAGTGAGGACCAAATTCAGAGAGACCTCTCAATGAAAAAGTTCGATTGGGATCATCCTCTTCACCTTCAGCCAATGAGTCCAACAACCGTGAAACAAGTCAGCGTTGTTTGGGATGCCTATACAGCAACTAAGGATGCCCATGCTGTCTGCATCCTTACAGAGTGGGATGAATTTAAGTCTCTCGACTATAAGAAGATGTATGATAGCATGCAAAAACCTGCTTTTATATTTGATGGTAGGAATGTTGTGGACGCGGAGAAGCTTAGGGAGATTGGATTTATAGTCTACTCAATTGGTAAGCCTCTGGATGCTTGGCTCAAGGACATGCCAGCTGTTGCTTAATCGCTTTACCTGGCTCGAGTAGTAGCTTGTTCACAAATCAAAGATATTACTTATATGATGCAGTCAGCTGGGATTCTTACCTTTTTTTTTTACTACGTTCAGTTTCTGTTTTGTTTTATCCCACTTAGGCTGAAAGACCATTCATGGTCACTACCAGACTCTTAATGTTTCTTTTGTATTGATGATATCACCTTTGTCATTTACTTGTCTTTGTCAGAGGATTTTGTTTGTTCGATTCAAAAATCTTGCTACCAAACATTTTGGGACAAGTTATAATATATGATATTCATAACTCATGAGTAGTGAGAGAAGAAGATAAATCTTAAATAAT : AAAAATTAAAA</gDNA_template>
            <first_frame> W  L  Q  E  D  S  S  F  V  K  L  C  C  S  V  G  L  D  L  R  F  D  T  K  T  D  Y  L  R  M  S  P  P  S  *  L  S  *  F  S  S  S  F  S  R  S  I  F  P  L  L  S  *  N  Y  G :   L  E  Q  R  K  M  V  K  I  C  C  I  G  A  G  Y  V  G  G  P  T  M  A  V  I  A  L  K  C  P  S  I  E  V  V  V  V  D  I  S  V  P  R  I  T  A  W  N  S  D  T  L  P  I  Y  E  P  G  L  Y  D  I  V  K  E  C  R  G  R  N  L  F  F  S  T  D  V  E  K  H  V  R  E  A  D  I  V  F  V  S  V  N  T  P  T  K  T  R  G  L  G  A  G  K  A  A  D  L  T  Y  W  E  S  A  A  R  M  I  A  D  V  S  K  S  D  K  I  V  V  E  K  S  T  V  P  V  K  T  A  E  A  I  E  K  I  L  T  H  N  S  K  G  I  N  F  Q  I  L  S  N  P  E  F  L  A  E  G  T  A  I  E  D  L  F  K  P  D  R  V  L  I  G  G  R  E  T  P  G  G  Q  K  A  I  Q  A  L  K  D  V  Y  A  Q  W  V  P  E  E  R  I  L  T  T  N  L  W  S  A  E  L  S  K  L  A  A  N  A  F  L  A  Q  R  I  S  S  V  N  A  M  S  A  L  C  E  A  T  G  A  N  V  S  Q  V  A  Y  A  V  G  K  D  S  R  I  G  P  K  F  L  N  A  S  V  G  F  G  G  S  C  F  Q  K  D  I  L  N  L  V  Y  I  C  E  C  N  G  L  P  E  V  A  E  Y  W  K  Q  V  I  K  I  N  D  Y  Q  K  N  R  F  V  N  R  V  V  A  S  M  F  N  T  V  S  G  K  K  V  A  I  L  G  F  A  F  K  K  D  T  G  D  T  R  E  T  P  A  I  D  V  C  K  G  L  L  G  D  K  A  N  L  S  I  Y  D  P  Q  V  S  E  D  Q  I  Q  R  D  L  S  M  K  K  F  D  W  D  H  P  L  H  L  Q  P  M  S  P  T  T  V  K  Q  V  S  V  V  W  D  A  Y  T  A  T  K  D  A  H  A  V  C  I  L  T  E  W  D  E  F  K  S  L  D  Y  K  K  M  Y  D  S  M  Q  K  P  A  F  I  F  D  G  R  N  V  V  D  A  E  K  L  R  E  I  G  F  I  V  Y  S  I  G  K  P  L  D  A  W  L  K  D  M  P  A  V  A  *  S  L  Y  L  A  R  V  V  A  C  S  Q  I  K  D  I  T  Y  M  M  Q  S  A  G  I  L  T  F  F  F  Y  Y  V  Q  F  L  F  C  F  I  P  L  R  L  K  D  H  S  W  S  L  P  D  S  *  C  F  F  C  I  D  D  I  T  F  V  I  Y  L  S  L  S  E  D  F  V  C  S  I  Q  K  S  C  Y  Q  T  F  W  D  K  L  *  Y  M  I  F  I  T  H  E  *  *  E  K  K  I  N  L  K  *   : *  K  L  K </first_frame>
            <second_frame>  G  F  K  K  T  R  H  S  S  S  S  A  A  A  L  G  *  I  *  D  L  T  P  K  Q  T  I  *  E  C  P  R  L  L  S  S  H  N  S  L  H  L  F  P  D  P  F  S  L  F  S  R  E  T  T   : V  W  N  K  G  K  W  L  R  F  A  V  *  E  L  D  M  L  G  G  P  P  W  L  S  *  H  S  N  A  L  L  L  K  W  L  L  L  I  F  L  C  L  V  S  Q  P  G  T  V  I  H  S  P  Y  M  S  Q  A  S  M  I  *  S  R  S  A  E  A  G  T  S  S  S  A  Q  M  W  R  N  M  C  G  R  L  I  S  F  L  F  L  *  I  L  L  P  R  Q  G  V  S  E  Q  A  R  L  Q  I  *  L  I  G  R  V  Q  L  A  *  *  L  M  S  Q  N  L  I  R  *  L  L  R  N  Q  L  F  L  S  K  L  P  R  Q  L  K  R  F  *  P  T  T  A  R  A  L  T  S  R  S  S  Q  T  L  S  S  L  Q  K  G  P  L  S  K  T  F  L  N  L  T  G  S  *  S  E  V  G  K  L  Q  G  G  R  R  L  S  K  H  *  R  M  F  M  P  N  G  S  L  K  N  A  S  S  P  P  I  C  G  Q  L  S  S  Q  N  W  L  P  M  H  F  W  H  K  E  S  L  L  *  M  P  C  Q  L  F  V  R  L  L  E  Q  M  S  H  R  *  R  M  L  L  E  R  T  R  G  L  V  P  S  S  L  M  P  V  L  V  L  V  A  L  A  S  R  R  I  F  *  I  W  F  T  F  V  S  A  M  V  F  Q  R  *  L  N  T  G  N  R  L  S  R  S  M  T  I  R  R  I  V  L  S  T  A  L  L  P  P  C  S  T  Q  Y  Q  A  R  K  S  P  F  *  V  S  L  S  R  R  I  L  V  I  L  E  R  P  L  Q  L  M  F  A  R  D  C  W  G  T  R  L  I  *  A  Y  M  I  L  K  *  V  R  T  K  F  R  E  T  S  Q  *  K  S  S  I  G  I  I  L  F  T  F  S  Q  *  V  Q  Q  P  *  N  K  S  A  L  F  G  M  P  I  Q  Q  L  R  M  P  M  L  S  A  S  L  Q  S  G  M  N  L  S  L  S  T  I  R  R  C  M  I  A  C  K  N  L  L  L  Y  L  M  V  G  M  L  W  T  R  R  S  L  G  R  L  D  L  *  S  T  Q  L  V  S  L  W  M  L  G  S  R  T  C  Q  L  L  L  N  R  F  T  W  L  E  *  *  L  V  H  K  S  K  I  L  L  I  *  C  S  Q  L  G  F  L  P  F  F  F  T  T  F  S  F  C  F  V  L  S  H  L  G  *  K  T  I  H  G  H  Y  Q  T  L  N  V  S  F  V  L  M  I  S  P  L  S  F  T  C  L  C  Q  R  I  L  F  V  R  F  K  N  L  A  T  K  H  F  G  T  S  Y  N  I  *  Y  S  *  L  M  S  S  E  R  R  R  *  I  L  N  N  :  K  N  *   </second_frame>
            <third_frame>   A  S  R  R  L  V  I  R  Q  A  L  L  Q  R  W  V  R  S  K  I  *  H  Q  N  R  L  F  K  N  V  P  A  F  L  A  L  I  I  L  F  I  F  F  Q  I  H  F  P  S  S  L  V  K  L  R  :  F  G  T  K  E  N  G  *  D  L  L  Y  R  S  W  I  C  W  G  A  H  H  G  C  H  S  T  Q  M  P  F  Y  *  S  G  C  C  *  Y  F  C  A  S  Y  H  S  L  E  Q  *  Y  T  P  H  I  *  A  R  P  L  *  Y  S  Q  G  V  P  R  Q  E  P  L  L  Q  H  R  C  G  E  T  C  A  G  G  *  Y  R  F  C  F  C  E  Y  S  Y  Q  D  K  G  S  R  S  R  Q  G  C  R  S  N  L  L  G  E  C  S  S  H  D  S  *  C  L  K  I  *  *  D  S  C  *  E  I  N  C  S  C  Q  N  C  R  G  N  *  K  D  F  D  P  Q  Q  Q  G  H  *  L  P  D  P  L  K  P  *  V  P  C  R  R  D  R  Y  R  R  P  F  *  T  *  Q  G  P  N  R  R  S  G  N  S  R  G  A  E  G  Y  P  S  I  E  G  C  L  C  P  M  G  P  *  R  T  H  P  H  H  Q  F  V  V  S  *  A  L  K  I  G  C  Q  C  I  F  G  T  K  N  L  F  C  E  C  H  V  S  S  L  *  G  Y  W  S  K  C  L  T  G  S  V  C  C  W  K  G  L  E  D  W  S  Q  V  P  *  C  Q  C  W  F  W  W  L  L  L  P  E  G  Y  S  E  S  G  L  H  L  *  V  Q  W  S  S  R  G  S  *  I  L  E  T  G  Y  Q  D  Q  *  L  S  E  E  S  F  C  Q  P  R  C  C  L  H  V  Q  H  S  I  R  Q  E  S  R  H  F  R  F  R  F  Q  E  G  Y  W  *  Y  S  R  D  P  C  N  *  C  L  Q  G  T  A  G  G  Q  G  *  F  E  H  I  *  S  S  S  E  *  G  P  N  S  E  R  P  L  N  E  K  V  R  L  G  S  S  S  S  P  S  A  N  E  S  N  N  R  E  T  S  Q  R  C  L  G  C  L  Y  S  N  *  G  C  P  C  C  L  H  P  Y  R  V  G  *  I  *  V  S  R  L  *  E  D  V  *  *  H  A  K  T  C  F  Y  I  *  W  *  E  C  C  G  R  G  E  A  *  G  D  W  I  Y  S  L  L  N  W  *  A  S  G  C  L  A  Q  G  H  A  S  C  C  L  I  A  L  P  G  S  S  S  S  L  F  T  N  Q  R  Y  Y  L  Y  D  A  V  S  W  D  S  Y  L  F  F  L  L  R  S  V  S  V  L  F  Y  P  T  *  A  E  R  P  F  M  V  T  T  R  L  L  M  F  L  L  Y  *  *  Y  H  L  C  H  L  L  V  F  V  R  G  F  C  L  F  D  S  K  I  L  L  P  N  I  L  G  Q  V  I  I  Y  D  I  H  N  S  *  V  V  R  E  E  D  K  S  *  I  I :   K  I  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61327" stop="61320"/>
                    <exon start="60167" stop="58709"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1464</number_coding_nucleotides>
                  <number_encoded_amino_acids>488</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NYGLEQRKMVKICCIGAGYVGGPTMAVIALKCPSIEVVVVDISVPRITAWNSDTLPIYEPGLYDIVKECRGRNLFFSTDVEKHVREADIVFVSVNTPTKTRGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGINFQILSNPEFLAEGTAIEDLFKPDRVLIGGRETPGGQKAIQALKDVYAQWVPEERILTTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAYAVGKDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKINDYQKNRFVNRVVASMFNTVSGKKVAILGFAFKKDTGDTRETPAIDVCKGLLGDKANLSIYDPQVSEDQIQRDLSMKKFDWDHPLHLQPMSPTTVKQVSVVWDAYTATKDAHAVCILTEWDEFKSLDYKKMYDSMQKPAFIFDGRNVVDAEKLREIGFIVYSIGKPLDAWLKDMPAVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="57940" PGL_stop="58974"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57940" e_stop="57957"/>
            <exon e_start="58506" e_stop="58974"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.611"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.611">
            <gDNA_exon_boundary e_start="57940" e_stop="57957" e_length="18"/>
          </exon>
          <intron i_serial="1" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="57958" i_stop="58505" i_length="548"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="58506" e_stop="58974" e_length="469"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57940" stop="57957"/>
              <exon start="58506" stop="58974"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217020" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTATTTTATACTTATT : TAAATGACAAAGGTGATATCATCAATACAAAAGAAACATTAAGAGTCTGGTAGTGACCATGAATGGTCTTTCAGCCTAAGTGGGATAAAACAAAACAGAAACTGAACGTAGTAAAAAAAAAAGGTAAGAATCCCAGCTGACTGCATCATATAAGTAATATCTTTGATTTGTGAACAAGCTACTACTCGAGCCAGGTAAAGCGATTAAGCAACAGCTGGCATGTCCTTGAGCCAAGCATCCAGAGGCTTACCAATTGAGTAGACTATAAATCCAATCTCCCTAAGCTTCTCCGCGTCCACAACATTCCTACCATCAAATATAAAAGCAGGTTTTTGCATGCTATCATACATCTTCTTATAGTCGAGAGACTTAAATTCATCCCACTCTGTAAGGATGCAGACAGCATGGGCATCCTTAGTTGCTGTATAGGCATCCCAAACAACGCTGACTTGTTTCACGGTTGTTGGAC</gDNA_template>
            <first_frame> N  Y  F  I  L  I  :  *  M  T  K  V  I  S  S  I  Q  K  K  H  *  E  S  G  S  D  H  E  W  S  F  S  L  S  G  I  K  Q  N  R  N  *  T  *  *  K  K  K  V  R  I  P  A  D  C  I  I  *  V  I  S  L  I  C  E  Q  A  T  T  R  A  R  *  S  D  *  A  T  A  G  M  S  L  S  Q  A  S  R  G  L  P  I  E  *  T  I  N  P  I  S  L  S  F  S  A  S  T  T  F  L  P  S  N  I  K  A  G  F  C  M  L  S  Y  I  F  L  *  S  R  D  L  N  S  S  H  S  V  R  M  Q  T  A  W  A  S  L  V  A  V  *  A  S  Q  T  T  L  T  C  F  T  V  V  G  </first_frame>
            <second_frame>  I  I  L  Y  L  F :   K  *  Q  R  *  Y  H  Q  Y  K  R  N  I  K  S  L  V  V  T  M  N  G  L  S  A  *  V  G  *  N  K  T  E  T  E  R  S  K  K  K  R  *  E  S  Q  L  T  A  S  Y  K  *  Y  L  *  F  V  N  K  L  L  L  E  P  G  K  A  I  K  Q  Q  L  A  C  P  *  A  K  H  P  E  A  Y  Q  L  S  R  L  *  I  Q  S  P  *  A  S  P  R  P  Q  H  S  Y  H  Q  I  *  K  Q  V  F  A  C  Y  H  T  S  S  Y  S  R  E  T  *  I  H  P  T  L  *  G  C  R  Q  H  G  H  P  *  L  L  Y  R  H  P  K  Q  R  *  L  V  S  R  L  L  D </second_frame>
            <third_frame>   L  F  Y  T  Y   : L  N  D  K  G  D  I  I  N  T  K  E  T  L  R  V  W  *  *  P  *  M  V  F  Q  P  K  W  D  K  T  K  Q  K  L  N  V  V  K  K  K  G  K  N  P  S  *  L  H  H  I  S  N  I  F  D  L  *  T  S  Y  Y  S  S  Q  V  K  R  L  S  N  S  W  H  V  L  E  P  S  I  Q  R  L  T  N  *  V  D  Y  K  S  N  L  P  K  L  L  R  V  H  N  I  P  T  I  K  Y  K  S  R  F  L  H  A  I  I  H  L  L  I  V  E  R  L  K  F  I  P  L  C  K  D  A  D  S  M  G  I  L  S  C  C  I  G  I  P  N  N  A  D  L  F  H  G  C  W   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58763" stop="58972"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VDYKSNLPKLLRVHNIPTIKYKSRFLHAIIHLLIVERLKFIPLCKDADSMGILSCCIGIPNNADLFHGCW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="59257" PGL_stop="59986"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59257" e_stop="59986"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.901"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.901">
            <gDNA_exon_boundary e_start="59257" e_stop="59986" e_length="730"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59257" stop="59986"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370821" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTGTTTCCAGTATTCAGCTACCTCTGGAAGACCATTGCACTCACAAATGTAAACCAGATTCAGAATATCCTTCTGGAAGCAAGAGCCACCAAAACCAACACTGGCATTAAGGAACTTGGGACCAATCCTCGAGTCCTTTCCAACAGCATACGCTACCTGTGAGACATTTGCTCCAGTAGCCTCACAAAGAGCTGACATGGCATTCACAGAAGAGATTCTTTGTGCCAAAAATGCATTGGCAGCCAATTTTGAGAGCTCAGCTGACCACAAATTGGTGGTGAGGATGCGTTCTTCAGGGACCCATTGGGCATAAACATCCTTCAATGCTTGGATAGCCTTCTGCCCCCCTGGAGTTTCCCGACCTCCGATTAGGACCCTGTCAGGTTTAAAAAGGTCTTCGATAGCGGTCCCTTCTGCAAGGAACTCAGGGTTTGAGAGGATCTGGAAGTTAATGCCCTTGCTGTTGTGGGTCAAAATCTTTTCAATTGCCTCGGCAGTTTTGACAGGAACAGTTGATTTCTCAACAACTATCTTATCAGATTTTGAGACATCAGCTATCATGCGAGCTGCACTCTCCCAATAAGTTAGATCTGCAGCCTTGCCTGCTCCGAGACCCCTTGTCTTGGTAGGAGTATTCACAGAAACAAAAACGATATCAGCCTCCCGCACATGTTTCTCCACATCTGTGCTGAAGAAGAGGTTCCTGCCTCGGCACTCCTTGACTATATC</gDNA_template>
            <first_frame> P  V  S  S  I  Q  L  P  L  E  D  H  C  T  H  K  C  K  P  D  S  E  Y  P  S  G  S  K  S  H  Q  N  Q  H  W  H  *  G  T  W  D  Q  S  S  S  P  F  Q  Q  H  T  L  P  V  R  H  L  L  Q  *  P  H  K  E  L  T  W  H  S  Q  K  R  F  F  V  P  K  M  H  W  Q  P  I  L  R  A  Q  L  T  T  N  W  W  *  G  C  V  L  Q  G  P  I  G  H  K  H  P  S  M  L  G  *  P  S  A  P  L  E  F  P  D  L  R  L  G  P  C  Q  V  *  K  G  L  R  *  R  S  L  L  Q  G  T  Q  G  L  R  G  S  G  S  *  C  P  C  C  C  G  S  K  S  F  Q  L  P  R  Q  F  *  Q  E  Q  L  I  S  Q  Q  L  S  Y  Q  I  L  R  H  Q  L  S  C  E  L  H  S  P  N  K  L  D  L  Q  P  C  L  L  R  D  P  L  S  W  *  E  Y  S  Q  K  Q  K  R  Y  Q  P  P  A  H  V  S  P  H  L  C  *  R  R  G  S  C  L  G  T  P  *  L  Y  </first_frame>
            <second_frame>  L  F  P  V  F  S  Y  L  W  K  T  I  A  L  T  N  V  N  Q  I  Q  N  I  L  L  E  A  R  A  T  K  T  N  T  G  I  K  E  L  G  T  N  P  R  V  L  S  N  S  I  R  Y  L  *  D  I  C  S  S  S  L  T  K  S  *  H  G  I  H  R  R  D  S  L  C  Q  K  C  I  G  S  Q  F  *  E  L  S  *  P  Q  I  G  G  E  D  A  F  F  R  D  P  L  G  I  N  I  L  Q  C  L  D  S  L  L  P  P  W  S  F  P  T  S  D  *  D  P  V  R  F  K  K  V  F  D  S  G  P  F  C  K  E  L  R  V  *  E  D  L  E  V  N  A  L  A  V  V  G  Q  N  L  F  N  C  L  G  S  F  D  R  N  S  *  F  L  N  N  Y  L  I  R  F  *  D  I  S  Y  H  A  S  C  T  L  P  I  S  *  I  C  S  L  A  C  S  E  T  P  C  L  G  R  S  I  H  R  N  K  N  D  I  S  L  P  H  M  F  L  H  I  C  A  E  E  E  V  P  A  S  A  L  L  D  Y  I </second_frame>
            <third_frame>   C  F  Q  Y  S  A  T  S  G  R  P  L  H  S  Q  M  *  T  R  F  R  I  S  F  W  K  Q  E  P  P  K  P  T  L  A  L  R  N  L  G  P  I  L  E  S  F  P  T  A  Y  A  T  C  E  T  F  A  P  V  A  S  Q  R  A  D  M  A  F  T  E  E  I  L  C  A  K  N  A  L  A  A  N  F  E  S  S  A  D  H  K  L  V  V  R  M  R  S  S  G  T  H  W  A  *  T  S  F  N  A  W  I  A  F  C  P  P  G  V  S  R  P  P  I  R  T  L  S  G  L  K  R  S  S  I  A  V  P  S  A  R  N  S  G  F  E  R  I  W  K  L  M  P  L  L  L  W  V  K  I  F  S  I  A  S  A  V  L  T  G  T  V  D  F  S  T  T  I  L  S  D  F  E  T  S  A  I  M  R  A  A  L  S  Q  *  V  R  S  A  A  L  P  A  P  R  P  L  V  L  V  G  V  F  T  E  T  K  T  I  S  A  S  R  T  C  F  S  T  S  V  L  K  K  R  F  L  P  R  H  S  L  T  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59571" stop="59840"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSFNAWIAFCPPGVSRPPIRTLSGLKRSSIAVPSARNSGFERIWKLMPLLLWVKIFSIASAVLTGTVDFSTTILSDFETSAIMRAALSQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59310" stop="59570"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TRFRISFWKQEPPKPTLALRNLGPILESFPTAYATCETFAPVASQRADMAFTEEILCAKNALAANFESSADHKLVVRMRSSGTHWA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="71291" PGL_stop="77904"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="71291" e_stop="71342"/>
            <exon e_start="75332" e_stop="75430"/>
            <exon e_start="75562" e_stop="75654"/>
            <exon e_start="75738" e_stop="75803"/>
            <exon e_start="75885" e_stop="76014"/>
            <exon e_start="76237" e_stop="76268"/>
            <exon e_start="77208" e_stop="77343"/>
            <exon e_start="77585" e_stop="77904"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.733" e_score="1.000"/>
          <exon-intron don_prob="0.951" acc_prob="0.892" e_score="1.000"/>
          <exon-intron don_prob="0.342" acc_prob="0.488" e_score="1.000"/>
          <exon-intron don_prob="0.895" acc_prob="0.914" e_score="1.000"/>
          <exon-intron don_prob="0.820" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.827" e_score="1.000"/>
          <exon-intron don_prob="0.926" acc_prob="0.999" e_score="0.993"/>
          <exon-only e_score="0.972"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="71291" e_stop="71342" e_length="52"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.733">
            <gDNA_intron_boundary i_start="71343" i_stop="75331" i_length="3989"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="75332" e_stop="75430" e_length="99"/>
          </exon>
          <intron i_serial="2" don_prob="0.951" acc_prob="0.892">
            <gDNA_intron_boundary i_start="75431" i_stop="75561" i_length="131"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75562" e_stop="75654" e_length="93"/>
          </exon>
          <intron i_serial="3" don_prob="0.342" acc_prob="0.488">
            <gDNA_intron_boundary i_start="75655" i_stop="75737" i_length="83"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="75738" e_stop="75803" e_length="66"/>
          </exon>
          <intron i_serial="4" don_prob="0.895" acc_prob="0.914">
            <gDNA_intron_boundary i_start="75804" i_stop="75884" i_length="81"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="75885" e_stop="76014" e_length="130"/>
          </exon>
          <intron i_serial="5" don_prob="0.820" acc_prob="0.995">
            <gDNA_intron_boundary i_start="76015" i_stop="76236" i_length="222"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="76237" e_stop="76268" e_length="32"/>
          </exon>
          <intron i_serial="6" don_prob="0.988" acc_prob="0.827">
            <gDNA_intron_boundary i_start="76269" i_stop="77207" i_length="939"/>
          </intron>
          <exon e_serial="7" e_score="0.993">
            <gDNA_exon_boundary e_start="77208" e_stop="77343" e_length="136"/>
          </exon>
          <intron i_serial="7" don_prob="0.926" acc_prob="0.999">
            <gDNA_intron_boundary i_start="77344" i_stop="77584" i_length="241"/>
          </intron>
          <exon e_serial="8" e_score="0.972">
            <gDNA_exon_boundary e_start="77585" e_stop="77904" e_length="320"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71291" stop="71342"/>
              <exon start="75332" stop="75430"/>
              <exon start="75562" stop="75654"/>
              <exon start="75738" stop="75803"/>
              <exon start="75885" stop="76014"/>
              <exon start="76237" stop="76268"/>
              <exon start="77208" stop="77343"/>
              <exon start="77585" stop="77904"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703535" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAGGGTGTGGAGAATGTAGAGGCAACCACGAAGCCTGAGAGAGTAAAAAAG : GGTCCGAGTAGAAGTGCCCGGAAACAATATGCTAAAAGGCAATGGTTGCGAGAAATGGTCAAAATTTATAAGAATGTAGCTTCTGAAGCAGAGGGACTT : AAGGAACTGCAGGCTAATGGTGGAAGAAGAGCTGGTAAATTACACCCAAAGTGGCTTGTTAATGGTGAGACTGATGGCAAACCAATGGCACGT : AGGAACTGGAAGCAGCAACAAAGCAAAACTGAATATCAAGAGGTGAATGGCCAACCAAAAGGACTA : CTGCACTGGAAGAAATTGCGGGAAGAAGATAAGGGTAGAGATACGAACAAACAAGATCAGGCGAATGAAAAAAGCACCTTCTGTGGAGAACCAGGACAACACAATGATATGGAGGCTGAAACTATTCCAG : ATCAAGCTTTGCAGCATGATCAAGTGCAAGAG : ATAGTTTTTCCGTCAATTGATGAAGTTTGCCTTGTCAAAAATGGTAATTCAGACTCTGTAGCAGGACTTCCTGCCACAAACAAATCAAATCCAGTCCTTAAGGCTGCTAAAAAGAAAACTAATGGCCCAGCTATAG : AAAAAGGAGTAAACCTCTGGGAACAACACAGTGAGACCATCAACGCGGAGAAGGAACAGTTACATGAAGAAAGTAGCTGGGGTACGTGGAGCTCTGCGAAGAAGAGCTCATGGTCAGAGAGAACCTTGAAAGGCAGTGCTCGTGGTCCTACAATGGCCTTTCGAAGATATAAAAGATGAAATATGAGATGAAGCAAACTTGTATATATTGTGTTCCTTACTCTCACAATGAAGTCAACGAACTCCGTTTTGTAGGTATCAAGGGGAAACTTTGTTGCTTATAGTAGCAGCAAGTTAGTGTTACCTAAAGTTTATCTGGAT</gDNA_template>
            <first_frame> E  G  C  G  E  C  R  G  N  H  E  A  *  E  S  K  K   : G  S  E  *  K  C  P  E  T  I  C  *  K  A  M  V  A  R  N  G  Q  N  L  *  E  C  S  F  *  S  R  G  T   : *  G  T  A  G  *  W  W  K  K  S  W  *  I  T  P  K  V  A  C  *  W  *  D  *  W  Q  T  N  G  T   : *  E  L  E  A  A  T  K  Q  N  *  I  S  R  G  E  W  P  T  K  R  T   : T  A  L  E  E  I  A  G  R  R  *  G  *  R  Y  E  Q  T  R  S  G  E  *  K  K  H  L  L  W  R  T  R  T  T  Q  *  Y  G  G  *  N  Y  S  R :   S  S  F  A  A  *  S  S  A  R   : D  S  F  S  V  N  *  *  S  L  P  C  Q  K  W  *  F  R  L  C  S  R  T  S  C  H  K  Q  I  K  S  S  P  *  G  C  *  K  E  N  *  W  P  S  Y  R :   K  R  S  K  P  L  G  T  T  Q  *  D  H  Q  R  G  E  G  T  V  T  *  R  K  *  L  G  Y  V  E  L  C  E  E  E  L  M  V  R  E  N  L  E  R  Q  C  S  W  S  Y  N  G  L  S  K  I  *  K  M  K  Y  E  M  K  Q  T  C  I  Y  C  V  P  Y  S  H  N  E  V  N  E  L  R  F  V  G  I  K  G  K  L  C  C  L  *  *  Q  Q  V  S  V  T  *  S  L  S  G  </first_frame>
            <second_frame>  K  G  V  E  N  V  E  A  T  T  K  P  E  R  V  K  K  :  G  P  S  R  S  A  R  K  Q  Y  A  K  R  Q  W  L  R  E  M  V  K  I  Y  K  N  V  A  S  E  A  E  G  L  :  K  E  L  Q  A  N  G  G  R  R  A  G  K  L  H  P  K  W  L  V  N  G  E  T  D  G  K  P  M  A  R  :  R  N  W  K  Q  Q  Q  S  K  T  E  Y  Q  E  V  N  G  Q  P  K  G  L  :  L  H  W  K  K  L  R  E  E  D  K  G  R  D  T  N  K  Q  D  Q  A  N  E  K  S  T  F  C  G  E  P  G  Q  H  N  D  M  E  A  E  T  I  P   : D  Q  A  L  Q  H  D  Q  V  Q  E  :  I  V  F  P  S  I  D  E  V  C  L  V  K  N  G  N  S  D  S  V  A  G  L  P  A  T  N  K  S  N  P  V  L  K  A  A  K  K  K  T  N  G  P  A  I   : E  K  G  V  N  L  W  E  Q  H  S  E  T  I  N  A  E  K  E  Q  L  H  E  E  S  S  W  G  T  W  S  S  A  K  K  S  S  W  S  E  R  T  L  K  G  S  A  R  G  P  T  M  A  F  R  R  Y  K  R  *  N  M  R  *  S  K  L  V  Y  I  V  F  L  T  L  T  M  K  S  T  N  S  V  L  *  V  S  R  G  N  F  V  A  Y  S  S  S  K  L  V  L  P  K  V  Y  L  D </second_frame>
            <third_frame>   R  V  W  R  M  *  R  Q  P  R  S  L  R  E  *  K  R :   V  R  V  E  V  P  G  N  N  M  L  K  G  N  G  C  E  K  W  S  K  F  I  R  M  *  L  L  K  Q  R  D  L :   R  N  C  R  L  M  V  E  E  E  L  V  N  Y  T  Q  S  G  L  L  M  V  R  L  M  A  N  Q  W  H  V :   G  T  G  S  S  N  K  A  K  L  N  I  K  R  *  M  A  N  Q  K  D  Y :   C  T  G  R  N  C  G  K  K  I  R  V  E  I  R  T  N  K  I  R  R  M  K  K  A  P  S  V  E  N  Q  D  N  T  M  I  W  R  L  K  L  F  Q  :  I  K  L  C  S  M  I  K  C  K  R :   *  F  F  R  Q  L  M  K  F  A  L  S  K  M  V  I  Q  T  L  *  Q  D  F  L  P  Q  T  N  Q  I  Q  S  L  R  L  L  K  R  K  L  M  A  Q  L  *  :  K  K  E  *  T  S  G  N  N  T  V  R  P  S  T  R  R  R  N  S  Y  M  K  K  V  A  G  V  R  G  A  L  R  R  R  A  H  G  Q  R  E  P  *  K  A  V  L  V  V  L  Q  W  P  F  E  D  I  K  D  E  I  *  D  E  A  N  L  Y  I  L  C  S  L  L  S  Q  *  S  Q  R  T  P  F  C  R  Y  Q  G  E  T  L  L  L  I  V  A  A  S  *  C  Y  L  K  F  I  W   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71292" stop="71342"/>
                    <exon start="75332" stop="75430"/>
                    <exon start="75562" stop="75654"/>
                    <exon start="75738" stop="75803"/>
                    <exon start="75885" stop="76014"/>
                    <exon start="76237" stop="76268"/>
                    <exon start="77208" stop="77343"/>
                    <exon start="77585" stop="77763"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>783</number_coding_nucleotides>
                  <number_encoded_amino_acids>261</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KGVENVEATTKPERVKKGPSRSARKQYAKRQWLREMVKIYKNVASEAEGLKELQANGGRRAGKLHPKWLVNGETDGKPMARRNWKQQQSKTEYQEVNGQPKGLLHWKKLREEDKGRDTNKQDQANEKSTFCGEPGQHNDMEAETIPDQALQHDQVQEIVFPSIDEVCLVKNGNSDSVAGLPATNKSNPVLKAAKKKTNGPAIEKGVNLWEQHSETINAEKEQLHEESSWGTWSSAKKSSWSERTLKGSARGPTMAFRRYKR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="75563" e_stop="75654"/>
            <exon e_start="75738" e_stop="75803"/>
            <exon e_start="75885" e_stop="76263"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.342" acc_prob="0.488" e_score="1.000"/>
          <exon-intron don_prob="0.895" acc_prob="0.914" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="75563" e_stop="75654" e_length="92"/>
          </exon>
          <intron i_serial="1" don_prob="0.342" acc_prob="0.488">
            <gDNA_intron_boundary i_start="75655" i_stop="75737" i_length="83"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="75738" e_stop="75803" e_length="66"/>
          </exon>
          <intron i_serial="2" don_prob="0.895" acc_prob="0.914">
            <gDNA_intron_boundary i_start="75804" i_stop="75884" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="0.997">
            <gDNA_exon_boundary e_start="75885" e_stop="76263" e_length="379"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75563" stop="75654"/>
              <exon start="75738" stop="75803"/>
              <exon start="75885" stop="76263"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237670" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGAACTGCAGGCTAATGGTGGAAGAAGAGCTGGTAAATTACACCCAAAGTGGCTTGTTAATGGTGAGACTGATGGCAAACCAATGGCACGT : AGGAACTGGAAGCAGCAACAAAGCAAAACTGAATATCAAGAGGTGAATGGCCAACCAAAAGGACTA : CTGCACTGGAAGAAATTGCGGGAAGAAGATAAGGGTAGAGATACGAACAAACAAGATCAGGCGAATGAAAAAAGCACCTTCTGTGGAGAACCAGGACAACACAATGATATGGAGGCTGAAACTATTCCAGGTTTTTTTTTAATGATTCAGCTGTCCTCCACTTTTCAGGGGGAGGACTTTTGGATGCTATTCTTCTTCCTACCAGTTCTTAAAATATTAATCCAAATCTAACCGCTTTTTTTGCCATAGTTTCAGTTTTGCATTCTTTATGGAAGAACTCTGGTTATCAATAAAAATAAAAATATGGAAGAACTATAGAGTCTTGAGTTTTTTCTTTTTTGATTTAATGCAGATCAAGCTTTGCAGCATGATCAAGTGC</gDNA_template>
            <first_frame> R  N  C  R  L  M  V  E  E  E  L  V  N  Y  T  Q  S  G  L  L  M  V  R  L  M  A  N  Q  W  H  V :   G  T  G  S  S  N  K  A  K  L  N  I  K  R  *  M  A  N  Q  K  D  Y :   C  T  G  R  N  C  G  K  K  I  R  V  E  I  R  T  N  K  I  R  R  M  K  K  A  P  S  V  E  N  Q  D  N  T  M  I  W  R  L  K  L  F  Q  V  F  F  *  *  F  S  C  P  P  L  F  R  G  R  T  F  G  C  Y  S  S  S  Y  Q  F  L  K  Y  *  S  K  S  N  R  F  F  C  H  S  F  S  F  A  F  F  M  E  E  L  W  L  S  I  K  I  K  I  W  K  N  Y  R  V  L  S  F  F  F  F  D  L  M  Q  I  K  L  C  S  M  I  K  C </first_frame>
            <second_frame>  G  T  A  G  *  W  W  K  K  S  W  *  I  T  P  K  V  A  C  *  W  *  D  *  W  Q  T  N  G  T   : *  E  L  E  A  A  T  K  Q  N  *  I  S  R  G  E  W  P  T  K  R  T   : T  A  L  E  E  I  A  G  R  R  *  G  *  R  Y  E  Q  T  R  S  G  E  *  K  K  H  L  L  W  R  T  R  T  T  Q  *  Y  G  G  *  N  Y  S  R  F  F  F  N  D  S  A  V  L  H  F  S  G  G  G  L  L  D  A  I  L  L  P  T  S  S  *  N  I  N  P  N  L  T  A  F  F  A  I  V  S  V  L  H  S  L  W  K  N  S  G  Y  Q  *  K  *  K  Y  G  R  T  I  E  S  *  V  F  S  F  L  I  *  C  R  S  S  F  A  A  *  S  S   </second_frame>
            <third_frame>   E  L  Q  A  N  G  G  R  R  A  G  K  L  H  P  K  W  L  V  N  G  E  T  D  G  K  P  M  A  R  :  R  N  W  K  Q  Q  Q  S  K  T  E  Y  Q  E  V  N  G  Q  P  K  G  L  :  L  H  W  K  K  L  R  E  E  D  K  G  R  D  T  N  K  Q  D  Q  A  N  E  K  S  T  F  C  G  E  P  G  Q  H  N  D  M  E  A  E  T  I  P  G  F  F  L  M  I  Q  L  S  S  T  F  Q  G  E  D  F  W  M  L  F  F  F  L  P  V  L  K  I  L  I  Q  I  *  P  L  F  L  P  *  F  Q  F  C  I  L  Y  G  R  T  L  V  I  N  K  N  K  N  M  E  E  L  *  S  L  E  F  F  L  F  *  F  N  A  D  Q  A  L  Q  H  D  Q  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75565" stop="75654"/>
                    <exon start="75738" stop="75803"/>
                    <exon start="75885" stop="76115"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>384</number_coding_nucleotides>
                  <number_encoded_amino_acids>128</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ELQANGGRRAGKLHPKWLVNGETDGKPMARRNWKQQQSKTEYQEVNGQPKGLLHWKKLREEDKGRDTNKQDQANEKSTFCGEPGQHNDMEAETIPGFFLMIQLSSTFQGEDFWMLFFFLPVLKILIQI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="79094" PGL_stop="79565"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79094" e_stop="79565"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="79094" e_stop="79565" e_length="472"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79094" stop="79565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314652" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAACCCTAGCCAATCAGCAATACTACAAAATCCAAACTCCGACCAATTTTCCGGCGACAATCACATTGCTTTTCCACAGTGACTGATGGAGTCCAACTGCAAATCCACTAGGCTTACGCCTAAGAAATGCTCCAAGAATACCGAAAATTTGAACCCAAATGTCGAAAACAGTCCGGGGTTTTCAAAATCTTGTAAATCACCAATGATGGCCAAATCGGCGATGAAAACCCAAAAGTCAGTTTCCAGAAACCCTAATACTAGTCAATTGGCTTCGCCTTCACCCAAAAACAAAATTCGTCAGAGGAAGTTTGTTATTGCCAAGAAGAAGAAGTCTAATAGAGATGAAGTGAACGCTTCAATGGTTTGTAAGTGTAATAAGGTTGGTGATGAGAAAAAGAAGTGTCTTTGTGTTGCTTACGAGACTCTCAGGGCTTCTCAAGAAGAGTTCTTCAAGAATCGTAGTGGAAATGA</gDNA_template>
            <first_frame> K  T  L  A  N  Q  Q  Y  Y  K  I  Q  T  P  T  N  F  P  A  T  I  T  L  L  F  H  S  D  *  W  S  P  T  A  N  P  L  G  L  R  L  R  N  A  P  R  I  P  K  I  *  T  Q  M  S  K  T  V  R  G  F  Q  N  L  V  N  H  Q  *  W  P  N  R  R  *  K  P  K  S  Q  F  P  E  T  L  I  L  V  N  W  L  R  L  H  P  K  T  K  F  V  R  G  S  L  L  L  P  R  R  R  S  L  I  E  M  K  *  T  L  Q  W  F  V  S  V  I  R  L  V  M  R  K  R  S  V  F  V  L  L  T  R  L  S  G  L  L  K  K  S  S  S  R  I  V  V  E  M  </first_frame>
            <second_frame>  K  P  *  P  I  S  N  T  T  K  S  K  L  R  P  I  F  R  R  Q  S  H  C  F  S  T  V  T  D  G  V  Q  L  Q  I  H  *  A  Y  A  *  E  M  L  Q  E  Y  R  K  F  E  P  K  C  R  K  Q  S  G  V  F  K  I  L  *  I  T  N  D  G  Q  I  G  D  E  N  P  K  V  S  F  Q  K  P  *  Y  *  S  I  G  F  A  F  T  Q  K  Q  N  S  S  E  E  V  C  Y  C  Q  E  E  E  V  *  *  R  *  S  E  R  F  N  G  L  *  V  *  *  G  W  *  *  E  K  E  V  S  L  C  C  L  R  D  S  Q  G  F  S  R  R  V  L  Q  E  S  *  W  K  * </second_frame>
            <third_frame>   N  P  S  Q  S  A  I  L  Q  N  P  N  S  D  Q  F  S  G  D  N  H  I  A  F  P  Q  *  L  M  E  S  N  C  K  S  T  R  L  T  P  K  K  C  S  K  N  T  E  N  L  N  P  N  V  E  N  S  P  G  F  S  K  S  C  K  S  P  M  M  A  K  S  A  M  K  T  Q  K  S  V  S  R  N  P  N  T  S  Q  L  A  S  P  S  P  K  N  K  I  R  Q  R  K  F  V  I  A  K  K  K  K  S  N  R  D  E  V  N  A  S  M  V  C  K  C  N  K  V  G  D  E  K  K  K  C  L  C  V  A  Y  E  T  L  R  A  S  Q  E  E  F  F  K  N  R  S  G  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79177" stop="79563"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>387</number_coding_nucleotides>
                  <number_encoded_amino_acids>129</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LMESNCKSTRLTPKKCSKNTENLNPNVENSPGFSKSCKSPMMAKSAMKTQKSVSRNPNTSQLASPSPKNKIRQRKFVIAKKKKSNRDEVNASMVCKCNKVGDEKKKCLCVAYETLRASQEEFFKNRSGN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="79769" PGL_stop="81867"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79769" e_stop="80093"/>
            <exon e_start="80343" e_stop="80394"/>
            <exon e_start="80480" e_stop="80572"/>
            <exon e_start="81040" e_stop="81159"/>
            <exon e_start="81444" e_stop="81542"/>
            <exon e_start="81818" e_stop="81867"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.949" acc_prob="0.988" e_score="0.997"/>
          <exon-intron don_prob="0.589" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.969" e_score="0.990"/>
          <exon-only e_score="0.960"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="79769" e_stop="80093" e_length="325"/>
          </exon>
          <intron i_serial="1" don_prob="0.949" acc_prob="0.988">
            <gDNA_intron_boundary i_start="80094" i_stop="80342" i_length="249"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="80343" e_stop="80394" e_length="52"/>
          </exon>
          <intron i_serial="2" don_prob="0.589" acc_prob="0.998">
            <gDNA_intron_boundary i_start="80395" i_stop="80479" i_length="85"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="80480" e_stop="80572" e_length="93"/>
          </exon>
          <intron i_serial="3" don_prob="0.973" acc_prob="0.966">
            <gDNA_intron_boundary i_start="80573" i_stop="81039" i_length="467"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="81040" e_stop="81159" e_length="120"/>
          </exon>
          <intron i_serial="4" don_prob="0.988" acc_prob="0.962">
            <gDNA_intron_boundary i_start="81160" i_stop="81443" i_length="284"/>
          </intron>
          <exon e_serial="5" e_score="0.990">
            <gDNA_exon_boundary e_start="81444" e_stop="81542" e_length="99"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.969">
            <gDNA_intron_boundary i_start="81543" i_stop="81817" i_length="275"/>
          </intron>
          <exon e_serial="6" e_score="0.960">
            <gDNA_exon_boundary e_start="81818" e_stop="81867" e_length="50"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79769" stop="80093"/>
              <exon start="80343" stop="80394"/>
              <exon start="80480" stop="80572"/>
              <exon start="81040" stop="81159"/>
              <exon start="81444" stop="81542"/>
              <exon start="81818" stop="81867"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E340354" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80043" stop="80093"/>
              <exon start="80343" stop="80394"/>
              <exon start="80480" stop="80572"/>
              <exon start="81040" stop="81159"/>
              <exon start="81444" stop="81542"/>
              <exon start="81818" stop="81866"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217618" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80057" stop="80093"/>
              <exon start="80343" stop="80394"/>
              <exon start="80480" stop="80572"/>
              <exon start="81040" stop="81159"/>
              <exon start="81444" stop="81542"/>
              <exon start="81818" stop="81866"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217654" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGTTGGGACTGTAAAGAGGGGGAGGGAGAGGTTGTTGGAAGAAGCAAGACAAAGTGTACCTGACTCTAGTTCTGGGAAAGTGTTAAATCTTGTCAAGGCTTTTGAGAAGCTCCTCACACCAAAAAAAAATGTGTGCGAGGAGAAAGGGGAAAAAGATGAAAAGGAAGAAGAGTCTAGCAAGGAACAACAAGGCTTACAACCCCCCAAGATTCCTGAGACACAGGTATCTTCATCTTCGTTTTGTCCACCGGATTTTTTCCTCACCTCCGAGAGTTTAGGCTTGGATTCGCGTCGTGCCTCCTCATTGGATAGCAGCCATGGATG : CTTCAGTATTTCAAGCAGGACTTCAGGTGGTGGTCAAAGAAGCAGACGCGAT : AGTGCTGAATCAATAGGCACGCTTCCTAGAAGAAGCTGGAAGAGAAGACATCGCAAACCAACCTCCCAGAAGCCCTTCAAACTTATAACTGAG : GAAAGGGGAAAAAACAAGGAGCAAGAATTTGTTAAGAAAGTGCAACAAATGGTGGAGGAAGAGGAGAAACAGAGGATACCAATTGCACAAGGCCTTCCATGGACAACAGACGAGCCAGAG : TGTTTGTCAAAGCCTCCGGTAAAAGAGATCACAAGGCCAGTTGATCTGGTGCTGCACAGTGACATGAGGGCTGTTGAACGTTTTGAGTTCGACCATCAG : GTAGCGGAAAAACTGAGCTATATTGAACAATACAAAATGGAAAGAGAAAG</gDNA_template>
            <first_frame> L  L  G  L  *  R  G  G  G  R  G  C  W  K  K  Q  D  K  V  Y  L  T  L  V  L  G  K  C  *  I  L  S  R  L  L  R  S  S  S  H  Q  K  K  M  C  A  R  R  K  G  K  K  M  K  R  K  K  S  L  A  R  N  N  K  A  Y  N  P  P  R  F  L  R  H  R  Y  L  H  L  R  F  V  H  R  I  F  S  S  P  P  R  V  *  A  W  I  R  V  V  P  P  H  W  I  A  A  M  D   : A  S  V  F  Q  A  G  L  Q  V  V  V  K  E  A  D  A  I :   V  L  N  Q  *  A  R  F  L  E  E  A  G  R  E  D  I  A  N  Q  P  P  R  S  P  S  N  L  *  L  R :   K  G  E  K  T  R  S  K  N  L  L  R  K  C  N  K  W  W  R  K  R  R  N  R  G  Y  Q  L  H  K  A  F  H  G  Q  Q  T  S  Q  S :   V  C  Q  S  L  R  *  K  R  S  Q  G  Q  L  I  W  C  C  T  V  T  *  G  L  L  N  V  L  S  S  T  I  R :   *  R  K  N  *  A  I  L  N  N  T  K  W  K  E  K  </first_frame>
            <second_frame>  C  W  D  C  K  E  G  E  G  E  V  V  G  R  S  K  T  K  C  T  *  L  *  F  W  E  S  V  K  S  C  Q  G  F  *  E  A  P  H  T  K  K  K  C  V  R  G  E  R  G  K  R  *  K  G  R  R  V  *  Q  G  T  T  R  L  T  T  P  Q  D  S  *  D  T  G  I  F  I  F  V  L  S  T  G  F  F  P  H  L  R  E  F  R  L  G  F  A  S  C  L  L  I  G  *  Q  P  W  M  :  L  Q  Y  F  K  Q  D  F  R  W  W  S  K  K  Q  T  R   : *  C  *  I  N  R  H  A  S  *  K  K  L  E  E  K  T  S  Q  T  N  L  P  E  A  L  Q  T  Y  N  *   : G  K  G  K  K  Q  G  A  R  I  C  *  E  S  A  T  N  G  G  G  R  G  E  T  E  D  T  N  C  T  R  P  S  M  D  N  R  R  A  R   : V  F  V  K  A  S  G  K  R  D  H  K  A  S  *  S  G  A  A  Q  *  H  E  G  C  *  T  F  *  V  R  P  S   : G  S  G  K  T  E  L  Y  *  T  I  Q  N  G  K  R  K </second_frame>
            <third_frame>   V  G  T  V  K  R  G  R  E  R  L  L  E  E  A  R  Q  S  V  P  D  S  S  S  G  K  V  L  N  L  V  K  A  F  E  K  L  L  T  P  K  K  N  V  C  E  E  K  G  E  K  D  E  K  E  E  E  S  S  K  E  Q  Q  G  L  Q  P  P  K  I  P  E  T  Q  V  S  S  S  S  F  C  P  P  D  F  F  L  T  S  E  S  L  G  L  D  S  R  R  A  S  S  L  D  S  S  H  G  C :   F  S  I  S  S  R  T  S  G  G  G  Q  R  S  R  R  D  :  S  A  E  S  I  G  T  L  P  R  R  S  W  K  R  R  H  R  K  P  T  S  Q  K  P  F  K  L  I  T  E  :  E  R  G  K  N  K  E  Q  E  F  V  K  K  V  Q  Q  M  V  E  E  E  E  K  Q  R  I  P  I  A  Q  G  L  P  W  T  T  D  E  P  E  :  C  L  S  K  P  P  V  K  E  I  T  R  P  V  D  L  V  L  H  S  D  M  R  A  V  E  R  F  E  F  D  H  Q  :  V  A  E  K  L  S  Y  I  E  Q  Y  K  M  E  R  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79771" stop="80093"/>
                    <exon start="80343" stop="80394"/>
                    <exon start="80480" stop="80572"/>
                    <exon start="81040" stop="81159"/>
                    <exon start="81444" stop="81542"/>
                    <exon start="81818" stop="81865"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>735</number_coding_nucleotides>
                  <number_encoded_amino_acids>245</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VGTVKRGRERLLEEARQSVPDSSSGKVLNLVKAFEKLLTPKKNVCEEKGEKDEKEEESSKEQQGLQPPKIPETQVSSSSFCPPDFFLTSESLGLDSRRASSLDSSHGCFSISSRTSGGGQRSRRDSAESIGTLPRRSWKRRHRKPTSQKPFKLITEERGKNKEQEFVKKVQQMVEEEEKQRIPIAQGLPWTTDEPECLSKPPVKEITRPVDLVLHSDMRAVERFEFDHQVAEKLSYIEQYKMERE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="88945" PGL_stop="90141"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88945" e_stop="89104"/>
            <exon e_start="89214" e_stop="89289"/>
            <exon e_start="89376" e_stop="89427"/>
            <exon e_start="89892" e_stop="90141"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.592" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.947" acc_prob="0.565" e_score="1.000"/>
          <exon-intron don_prob="0.875" acc_prob="0.768" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="88945" e_stop="89104" e_length="160"/>
          </exon>
          <intron i_serial="1" don_prob="0.592" acc_prob="0.987">
            <gDNA_intron_boundary i_start="89105" i_stop="89213" i_length="109"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89214" e_stop="89289" e_length="76"/>
          </exon>
          <intron i_serial="2" don_prob="0.947" acc_prob="0.565">
            <gDNA_intron_boundary i_start="89290" i_stop="89375" i_length="86"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="89376" e_stop="89427" e_length="52"/>
          </exon>
          <intron i_serial="3" don_prob="0.875" acc_prob="0.768">
            <gDNA_intron_boundary i_start="89428" i_stop="89891" i_length="464"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="89892" e_stop="90141" e_length="250"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88945" stop="89104"/>
              <exon start="89214" stop="89289"/>
              <exon start="89376" stop="89427"/>
              <exon start="89892" stop="89941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396969" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88946" stop="89104"/>
              <exon start="89214" stop="89289"/>
              <exon start="89376" stop="89427"/>
              <exon start="89892" stop="90141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277605" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGAATATGTCATAGTTTCTTTTGTGAACGGCAAGCAGGTTGTTGCAGAAAATTCAATATTCCAAGCTAAAGCGGAATCTGCAATCACAATACCTAAAAGGTCACAGGTTTAGTGCTGTAGAGTGGTGCTAATGCTTTCCATCTTTTGATATCATGCACTG : GGACATTGTGGTTCTTGTTGGGCTGTTGGTGCTGCTGAGTCGTTGTCTGATTGTTTCTGATACTCATTTTGGCTAG : AATATATCTATGTCAGCAAATGATATCATAGCATGCTGTGGTCACTGAAGAG : GATCATCCAGTGGGCAGGAAAGGGAATTTGATTACTTTGTGTGGTTGGTTAAAGAACACGGCAACGACATGATTGCTACTCCAGCTAATACTCTGCTTGTTGAAAGTGGAATGAGATTCATATTATATGAAATCAAATTGCTCGAGTATTAAGTAAATCTAGATTTCTTTCTAGACACAACTGAATCTGTTTTTGAGAGACTGGAAGATTAGAGATACTTTATTCTCTTCGGACAGAAATCTTTCCCACA</gDNA_template>
            <first_frame> *  I  C  H  S  F  F  C  E  R  Q  A  G  C  C  R  K  F  N  I  P  S  *  S  G  I  C  N  H  N  T  *  K  V  T  G  L  V  L  *  S  G  A  N  A  F  H  L  L  I  S  C  T   : G  T  L  W  F  L  L  G  C  W  C  C  *  V  V  V  *  L  F  L  I  L  I  L  A  R :   I  Y  L  C  Q  Q  M  I  S  *  H  A  V  V  T  E  E  :  D  H  P  V  G  R  K  G  N  L  I  T  L  C  G  W  L  K  N  T  A  T  T  *  L  L  L  Q  L  I  L  C  L  L  K  V  E  *  D  S  Y  Y  M  K  S  N  C  S  S  I  K  *  I  *  I  S  F  *  T  Q  L  N  L  F  L  R  D  W  K  I  R  D  T  L  F  S  S  D  R  N  L  S  H  </first_frame>
            <second_frame>  E  Y  V  I  V  S  F  V  N  G  K  Q  V  V  A  E  N  S  I  F  Q  A  K  A  E  S  A  I  T  I  P  K  R  S  Q  V  *  C  C  R  V  V  L  M  L  S  I  F  *  Y  H  A  L  :  G  H  C  G  S  C  W  A  V  G  A  A  E  S  L  S  D  C  F  *  Y  S  F  W  L   : E  Y  I  Y  V  S  K  *  Y  H  S  M  L  W  S  L  K  R :   I  I  Q  W  A  G  K  G  I  *  L  L  C  V  V  G  *  R  T  R  Q  R  H  D  C  Y  S  S  *  Y  S  A  C  *  K  W  N  E  I  H  I  I  *  N  Q  I  A  R  V  L  S  K  S  R  F  L  S  R  H  N  *  I  C  F  *  E  T  G  R  L  E  I  L  Y  S  L  R  T  E  I  F  P  T </second_frame>
            <third_frame>   N  M  S  *  F  L  L  *  T  A  S  R  L  L  Q  K  I  Q  Y  S  K  L  K  R  N  L  Q  S  Q  Y  L  K  G  H  R  F  S  A  V  E  W  C  *  C  F  P  S  F  D  I  M  H  W :   D  I  V  V  L  V  G  L  L  V  L  L  S  R  C  L  I  V  S  D  T  H  F  G  *  :  N  I  S  M  S  A  N  D  I  I  A  C  C  G  H  *  R   : G  S  S  S  G  Q  E  R  E  F  D  Y  F  V  W  L  V  K  E  H  G  N  D  M  I  A  T  P  A  N  T  L  L  V  E  S  G  M  R  F  I  L  Y  E  I  K  L  L  E  Y  *  V  N  L  D  F  F  L  D  T  T  E  S  V  F  E  R  L  E  D  *  R  Y  F  I  L  F  G  Q  K  S  F  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0280E02.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="90236" PGL_stop="90763"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90236" e_stop="90763"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.973"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.973">
            <gDNA_exon_boundary e_start="90236" e_stop="90763" e_length="528"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90236" stop="90763"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396968" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACCAGTTAAGCTCTTTATAAGAAACAGCATTTGGGAGCTGAGGAGCAAATCTTAAGTCAGCTTCTTCGCGGTGGTGATATCTTTCTTTCCGCTCTTCAAAAGAGGTTGCTTTGATGAAAATTTGCATCGCCATCACGGTTCAAGTTTCATACTAGTACAAAATAGTGATTGATGGTACAAAAATTGAGTGAATTTTTCATTAGGACAATAAAAAATAAGATTGGAATCAAAAGGGCATGGAAGAAGGAGACCTGCTACATGTAAGTCCGCAGGTCAACCTGGGACTGTCATTGTACTCTGATCAAACTAAAAGGTCACAGGTTTAGATTGTAGAGTTTTTTAATAGAGTGGTTCAATTTTTATGCGAAGTTACTTTTAATTGTCAAATAATTGTTTGACAGAGTTCAAAATAATTGTTGGCCACCAACTCTACCTTTTTGAATTCTAGTGTTACCATCTGCTATAATTGTAGAAATATTAGTGGTTTATATTCTAGTATAATTATGTTTATCTGCTTAAATAGGATC</gDNA_template>
            <first_frame> N  Q  L  S  S  L  *  E  T  A  F  G  S  *  G  A  N  L  K  S  A  S  S  R  W  *  Y  L  S  F  R  S  S  K  E  V  A  L  M  K  I  C  I  A  I  T  V  Q  V  S  Y  *  Y  K  I  V  I  D  G  T  K  I  E  *  I  F  H  *  D  N  K  K  *  D  W  N  Q  K  G  M  E  E  G  D  L  L  H  V  S  P  Q  V  N  L  G  L  S  L  Y  S  D  Q  T  K  R  S  Q  V  *  I  V  E  F  F  N  R  V  V  Q  F  L  C  E  V  T  F  N  C  Q  I  I  V  *  Q  S  S  K  *  L  L  A  T  N  S  T  F  L  N  S  S  V  T  I  C  Y  N  C  R  N  I  S  G  L  Y  S  S  I  I  M  F  I  C  L  N  R  I </first_frame>
            <second_frame>  T  S  *  A  L  Y  K  K  Q  H  L  G  A  E  E  Q  I  L  S  Q  L  L  R  G  G  D  I  F  L  S  A  L  Q  K  R  L  L  *  *  K  F  A  S  P  S  R  F  K  F  H  T  S  T  K  *  *  L  M  V  Q  K  L  S  E  F  F  I  R  T  I  K  N  K  I  G  I  K  R  A  W  K  K  E  T  C  Y  M  *  V  R  R  S  T  W  D  C  H  C  T  L  I  K  L  K  G  H  R  F  R  L  *  S  F  L  I  E  W  F  N  F  Y  A  K  L  L  L  I  V  K  *  L  F  D  R  V  Q  N  N  C  W  P  P  T  L  P  F  *  I  L  V  L  P  S  A  I  I  V  E  I  L  V  V  Y  I  L  V  *  L  C  L  S  A  *  I  G   </second_frame>
            <third_frame>   P  V  K  L  F  I  R  N  S  I  W  E  L  R  S  K  S  *  V  S  F  F  A  V  V  I  S  F  F  P  L  F  K  R  G  C  F  D  E  N  L  H  R  H  H  G  S  S  F  I  L  V  Q  N  S  D  *  W  Y  K  N  *  V  N  F  S  L  G  Q  *  K  I  R  L  E  S  K  G  H  G  R  R  R  P  A  T  C  K  S  A  G  Q  P  G  T  V  I  V  L  *  S  N  *  K  V  T  G  L  D  C  R  V  F  *  *  S  G  S  I  F  M  R  S  Y  F  *  L  S  N  N  C  L  T  E  F  K  I  I  V  G  H  Q  L  Y  L  F  E  F  *  C  Y  H  L  L  *  L  *  K  Y  *  W  F  I  F  *  Y  N  Y  V  Y  L  L  K  *  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0280E02.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="93996" PGL_stop="91493"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="93159" e_stop="92193"/>
            <exon e_start="92117" e_stop="91920"/>
            <exon e_start="91849" e_stop="91493"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.953" e_score="0.997"/>
          <exon-intron don_prob="0.889" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="93159" e_stop="92193" e_length="967"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.953">
            <gDNA_intron_boundary i_start="92192" i_stop="92118" i_length="75"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92117" e_stop="91920" e_length="198"/>
          </exon>
          <intron i_serial="2" don_prob="0.889" acc_prob="0.987">
            <gDNA_intron_boundary i_start="91919" i_stop="91850" i_length="70"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="91849" e_stop="91493" e_length="357"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93159" stop="92555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392902" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93158" stop="92554"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242589" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93158" stop="92555"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236370" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93018" stop="92295"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327930" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92340" stop="92193"/>
              <exon start="92117" stop="91920"/>
              <exon start="91849" stop="91592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550096" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92213" stop="92193"/>
              <exon start="92117" stop="91920"/>
              <exon start="91849" stop="91500"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396024" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92032" stop="91920"/>
              <exon start="91849" stop="91518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732796" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91934" stop="91920"/>
              <exon start="91849" stop="91493"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220656" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91765" stop="91493"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91736" stop="91527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392901" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCGCACATTGATTGAGGAATTGGTTCGTTATATGGCGCGGACAACATGAGCTAGTACAAGGTCCACTTTCATAAAATGAATTCCCAAATTCATCTTTTAATCTCTTTTGTGTTTTGTTTGTTTGTGTGCTAATTGAGCACCAACATGTCACTTGTCTGAAATTCTGCTCTTCAGTTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGAGGTTGTCCTGTTTCGTTGCATCTCCGCTTCAAGGCAATCAGGTTCCTTAGACGCTCTATTCTTCTGAGTTCACTATTTTAGGTTATACTAAACTACTCTCGACCGTTACAAAGTATGTTGGCTATCTAACTGATTAGACGTTGATGAATGCCACAATTTGAAGTTTGAGCTGAATGTACACTTTCAGAAACACAAATGAATTAGATAAGTTGTCTTTACTTTGACAGAACTTGCCAAAAAAAGTTATTTTTTCCTCTTTTAATGTCGAGATGGAATGGTCGGGGATCTCGTTTCAGTATTAAAAACATGCATTTTTATATATGCTCGACTACTAATTCCACGCAGGAAGAGTGGAGAATTCACATGCTACCCATAGAGTTCCTGTTGATCACTGTCTTTCCAGTTATTGATATGAGATTGAGATGTAAAACCAGAGGAGTCGAGTACCCACCGGGGGTCCCCAATACTGTTTCTAAGGTTCTTGAACTCGACATA : ATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTCCCCACGTCCTAGCTTTAGTCCCTGAAGCTGTTCGTAGAGATGTTGCAGAGTCG : GTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTAAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGGGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAATTGATTACTTGATAGTAAATTAAAATATTATATTTATATTATTTTATGTATAAAGTCCTTGACTTATATATTGG</gDNA_template>
            <first_frame> S  H  I  D  *  G  I  G  S  L  Y  G  A  D  N  M  S  *  Y  K  V  H  F  H  K  M  N  S  Q  I  H  L  L  I  S  F  V  F  C  L  F  V  C  *  L  S  T  N  M  S  L  V  *  N  S  A  L  Q  F  S  G  L  E  P  *  R  *  A  L  A  I  S  L  H  K  V  I  V  Q  *  K  S  T  C  L  A  H  V  R  Y  Y  Y  D  D  E  S  L  T  R  M  L  Y  S  S  *  H  Q  Y  L  *  I  *  V  S  C  *  *  T  Q  Y  L  F  G  K  Q  S  E  E  C  S  S  A  N  K  D  I  G  V  L  S  R  S  H  V  S  S  T  S  G  R  S  L  S  N  S  A  V  R  L  S  C  F  V  A  S  P  L  Q  G  N  Q  V  P  *  T  L  Y  S  S  E  F  T  I  L  G  Y  T  K  L  L  S  T  V  T  K  Y  V  G  Y  L  T  D  *  T  L  M  N  A  T  I  *  S  L  S  *  M  Y  T  F  R  N  T  N  E  L  D  K  L  S  L  L  *  Q  N  L  P  K  K  V  I  F  S  S  F  N  V  E  M  E  W  S  G  I  S  F  Q  Y  *  K  H  A  F  L  Y  M  L  D  Y  *  F  H  A  G  R  V  E  N  S  H  A  T  H  R  V  P  V  D  H  C  L  S  S  Y  *  Y  E  I  E  M  *  N  Q  R  S  R  V  P  T  G  G  P  Q  Y  C  F  *  G  S  *  T  R  H   : N  K  M  G  A  S  G  V  G  *  C  A  E  A  I  *  V  L  T  W  C  K  R  L  S  L  P  R  Q  K  W  T  T  D  Q  A  E  R  S  T  T  D  E  Y  *  L  C  S  S  P  R  P  S  F  S  P  *  S  C  S  *  R  C  C  R  V   : G  A  K  G  T  T  A  E  H  E  E  *  S  K  R  *  L  A  H  R  L  C  R  I  Q  E  G  N  A  E  Q  L  I  S  L  N  S  Y  Y  N  Y  R  G  A  W  *  L  T  L  V  I  I  T  D  N  P  N  *  K  K  V  I  I  S  L  L  I  *  R  F  *  *  C  F  D  F  I  A  Y  R  V  I  F  S  *  P  F  E  V  F  S  *  R  V  N  *  L  L  D  S  K  L  K  Y  Y  I  Y  I  I  L  C  I  K  S  L  T  Y  I  L  </first_frame>
            <second_frame>  R  T  L  I  E  E  L  V  R  Y  M  A  R  T  T  *  A  S  T  R  S  T  F  I  K  *  I  P  K  F  I  F  *  S  L  L  C  F  V  C  L  C  A  N  *  A  P  T  C  H  L  S  E  I  L  L  F  S  F  Q  A  L  N  H  E  D  R  H  L  L  F  L  Y  T  R  S  *  F  N  E  S  Q  L  V  *  L  M  S  D  I  T  M  M  M  S  L  *  L  V  C  Y  I  R  P  N  I  S  I  Y  K  S  E  S  L  V  D  E  H  N  I  C  S  E  N  K  V  K  N  V  V  Q  Q  T  K  I  S  G  F  *  V  G  P  M  L  V  L  L  P  E  E  V  *  A  I  Q  L  *  G  C  P  V  S  L  H  L  R  F  K  A  I  R  F  L  R  R  S  I  L  L  S  S  L  F  *  V  I  L  N  Y  S  R  P  L  Q  S  M  L  A  I  *  L  I  R  R  *  *  M  P  Q  F  E  V  *  A  E  C  T  L  S  E  T  Q  M  N  *  I  S  C  L  Y  F  D  R  T  C  Q  K  K  L  F  F  P  L  L  M  S  R  W  N  G  R  G  S  R  F  S  I  K  N  M  H  F  Y  I  C  S  T  T  N  S  T  Q  E  E  W  R  I  H  M  L  P  I  E  F  L  L  I  T  V  F  P  V  I  D  M  R  L  R  C  K  T  R  G  V  E  Y  P  P  G  V  P  N  T  V  S  K  V  L  E  L  D  I  :  I  R  W  E  L  Q  G  L  D  D  V  L  K  P  S  E  F  S  L  G  V  K  G  S  L  Y  P  D  R  N  G  P  R  T  R  L  K  G  Q  L  Q  M  S  I  S  F  V  L  P  H  V  L  A  L  V  P  E  A  V  R  R  D  V  A  E  S  :  V  L  R  G  L  L  Q  N  M  K  S  K  V  N  G  S  L  L  T  D  Y  A  E  F  K  R  E  M  Q  N  N  L  L  V  *  T  V  T  T  T  I  G  V  H  G  D  *  H  *  L  S  *  L  I  I  R  T  K  K  K  L  L  S  V  Y  *  F  S  D  F  D  N  V  L  I  L  L  L  I  G  L  S  F  L  N  R  L  R  F  F  L  N  G  L  I  D  Y  L  I  V  N  *  N  I  I  F  I  L  F  Y  V  *  S  P  *  L  I  Y  W </second_frame>
            <third_frame>   A  H  *  L  R  N  W  F  V  I  W  R  G  Q  H  E  L  V  Q  G  P  L  S  *  N  E  F  P  N  S  S  F  N  L  F  C  V  L  F  V  C  V  L  I  E  H  Q  H  V  T  C  L  K  F  C  S  S  V  F  R  P  *  T  M  K  I  G  T  C  Y  F  F  T  Q  G  H  S  S  M  K  V  N  L  F  S  S  C  P  I  L  L  *  *  *  V  F  D  S  Y  V  I  F  V  L  T  S  V  F  I  N  L  S  L  L  L  M  N  T  I  S  V  R  K  T  K  *  R  M  *  F  S  K  Q  R  Y  R  G  F  K  *  V  P  C  *  F  Y  F  R  K  K  F  E  Q  F  S  C  E  V  V  L  F  R  C  I  S  A  S  R  Q  S  G  S  L  D  A  L  F  F  *  V  H  Y  F  R  L  Y  *  T  T  L  D  R  Y  K  V  C  W  L  S  N  *  L  D  V  D  E  C  H  N  L  K  F  E  L  N  V  H  F  Q  K  H  K  *  I  R  *  V  V  F  T  L  T  E  L  A  K  K  S  Y  F  F  L  F  *  C  R  D  G  M  V  G  D  L  V  S  V  L  K  T  C  I  F  I  Y  A  R  L  L  I  P  R  R  K  S  G  E  F  T  C  Y  P  *  S  S  C  *  S  L  S  F  Q  L  L  I  *  D  *  D  V  K  P  E  E  S  S  T  H  R  G  S  P  I  L  F  L  R  F  L  N  S  T  * :   *  D  G  S  F  R  G  W  M  M  C  *  S  H  L  S  S  H  L  V  *  K  A  L  F  T  P  T  E  M  D  H  G  P  G  *  K  V  N  Y  R  *  V  L  A  L  F  F  P  T  S  *  L  *  S  L  K  L  F  V  E  M  L  Q  S  R :   C  *  G  D  Y  C  R  T  *  R  V  K  *  T  V  A  C  S  Q  T  M  P  N  S  R  G  K  C  R  T  T  Y  *  S  E  Q  L  L  Q  L  *  G  C  M  V  I  N  T  S  Y  H  N  *  *  S  E  L  K  K  S  Y  Y  Q  F  I  D  L  A  I  L  I  M  F  *  F  Y  C  L  S  G  Y  L  F  L  T  V  *  G  F  F  L  T  G  *  L  I  T  *  *  *  I  K  I  L  Y  L  Y  Y  F  M  Y  K  V  L  D  L  Y  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92483" stop="92193"/>
                    <exon start="92117" stop="91920"/>
                    <exon start="91849" stop="91745"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>591</number_coding_nucleotides>
                  <number_encoded_amino_acids>197</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISCLYFDRTCQKKLFFPLLMSRWNGRGSRFSIKNMHFYICSTTNSTQEEWRIHMLPIEFLLITVFPVIDMRLRCKTRGVEYPPGVPNTVSKVLELDIIRWELQGLDDVLKPSEFSLGVKGSLYPDRNGPRTRLKGQLQMSISFVLPHVLALVPEAVRRDVAESVLRGLLQNMKSKVNGSLLTDYAEFKREMQNNLLV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="93953" e_stop="93754"/>
            <exon e_start="93677" e_stop="93591"/>
            <exon e_start="92985" e_stop="92647"/>
            <exon e_start="92342" e_stop="92193"/>
            <exon e_start="92117" e_stop="91920"/>
            <exon e_start="91849" e_stop="91493"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.989" e_score="0.955"/>
          <exon-intron don_prob="0.997" acc_prob="0.696" e_score="1.000"/>
          <exon-intron don_prob="0.951" acc_prob="0.946" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.889" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="93953" e_stop="93754" e_length="200"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.989">
            <gDNA_intron_boundary i_start="93753" i_stop="93678" i_length="76"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="93677" e_stop="93591" e_length="87"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.696">
            <gDNA_intron_boundary i_start="93590" i_stop="92986" i_length="605"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="92985" e_stop="92647" e_length="339"/>
          </exon>
          <intron i_serial="3" don_prob="0.951" acc_prob="0.946">
            <gDNA_intron_boundary i_start="92646" i_stop="92343" i_length="304"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="92342" e_stop="92193" e_length="150"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.953">
            <gDNA_intron_boundary i_start="92192" i_stop="92118" i_length="75"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="92117" e_stop="91920" e_length="198"/>
          </exon>
          <intron i_serial="5" don_prob="0.889" acc_prob="0.987">
            <gDNA_intron_boundary i_start="91919" i_stop="91850" i_length="70"/>
          </intron>
          <exon e_serial="6" e_score="0.991">
            <gDNA_exon_boundary e_start="91849" e_stop="91493" e_length="357"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93953" stop="93754"/>
              <exon start="93677" stop="93591"/>
              <exon start="92985" stop="92866"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316693" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93914" stop="93754"/>
              <exon start="93677" stop="93591"/>
              <exon start="92985" stop="92720"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246053" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93868" stop="93754"/>
              <exon start="93677" stop="93591"/>
              <exon start="92985" stop="92647"/>
              <exon start="92342" stop="92269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235280" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93868" stop="93754"/>
              <exon start="93677" stop="93591"/>
              <exon start="92985" stop="92688"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377105" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92340" stop="92193"/>
              <exon start="92117" stop="91920"/>
              <exon start="91849" stop="91592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550096" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92213" stop="92193"/>
              <exon start="92117" stop="91920"/>
              <exon start="91849" stop="91500"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396024" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92032" stop="91920"/>
              <exon start="91849" stop="91518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732796" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91934" stop="91920"/>
              <exon start="91849" stop="91493"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220656" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91765" stop="91493"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91736" stop="91527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392901" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAATCCTCAGCTAAATGGCAAAAATTGCAGTATCTCATACATCATCTTCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCACTCTATGAAAACCCCAGG : GCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAG : TTTTCAGGCCTTGAACCATGAAGATAGGCACTTGCTATTTCTTTACACAAGGTCATAGTTCAATGAAAGTCAACTTGTTTAGCTCATGTCCGATATTACTATGATGATGAGTCTTTGACTCGTATGTTATATTCGTCCTAACATCAGTATTTATAAATCTGAGTCTCTTGTTGATGAACACAATATCTGTTCGGAAAACAAAGTGAAGAATGTAGTTCAGCAAACAAAGATATCGGGGTTTTAAGTAGGTCCCATGTTAGTTCTACTTCCGGAAGAAGTTTGAGCAATTCAGCTGTGAGGTTGTCCTGTTTCGTTGCATCTCCGCTTCAAGGCAATCAG : GAAGAGTGGAGAATTCACATGCTACCCATAGAGTTCCTGTTGATCACTGTCTTTCCAGTTATTGATATGAGATTGAGATGTAAAACCAGAGGAGTCGAGTACCCACCGGGGGTCCCCAATACTGTTTCTAAGGTTCTTGAACTCGACATA : ATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTCCCCACGTCCTAGCTTTAGTCCCTGAAGCTGTTCGTAGAGATGTTGCAGAGTCG : GTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTAAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGGGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAATTGATTACTTGATAGTAAATTAAAATATTATATTTATATTATTTTATGTATAAAGTCCTTGACTTATATATTGG</gDNA_template>
            <first_frame> *  S  S  A  K  W  Q  K  L  Q  Y  L  I  H  H  L  H  S  S  T  I  S  S  S  P  N  *  M  K  K  E  N  S  S  S  A  N  N  *  L  *  N  L  R  L  *  I  M  L  Q  L  T  L  A  E  L  A  L  I  F  H  S  M  K  T  P  G :   L  A  L  I  D  I  W  R  I  S  L  E  C  S  R  P  F  F  L  T  K  E  E  V  T  N  S  I  S :   F  Q  A  L  N  H  E  D  R  H  L  L  F  L  Y  T  R  S  *  F  N  E  S  Q  L  V  *  L  M  S  D  I  T  M  M  M  S  L  *  L  V  C  Y  I  R  P  N  I  S  I  Y  K  S  E  S  L  V  D  E  H  N  I  C  S  E  N  K  V  K  N  V  V  Q  Q  T  K  I  S  G  F  *  V  G  P  M  L  V  L  L  P  E  E  V  *  A  I  Q  L  *  G  C  P  V  S  L  H  L  R  F  K  A  I  R :   K  S  G  E  F  T  C  Y  P  *  S  S  C  *  S  L  S  F  Q  L  L  I  *  D  *  D  V  K  P  E  E  S  S  T  H  R  G  S  P  I  L  F  L  R  F  L  N  S  T  * :   *  D  G  S  F  R  G  W  M  M  C  *  S  H  L  S  S  H  L  V  *  K  A  L  F  T  P  T  E  M  D  H  G  P  G  *  K  V  N  Y  R  *  V  L  A  L  F  F  P  T  S  *  L  *  S  L  K  L  F  V  E  M  L  Q  S  R :   C  *  G  D  Y  C  R  T  *  R  V  K  *  T  V  A  C  S  Q  T  M  P  N  S  R  G  K  C  R  T  T  Y  *  S  E  Q  L  L  Q  L  *  G  C  M  V  I  N  T  S  Y  H  N  *  *  S  E  L  K  K  S  Y  Y  Q  F  I  D  L  A  I  L  I  M  F  *  F  Y  C  L  S  G  Y  L  F  L  T  V  *  G  F  F  L  T  G  *  L  I  T  *  *  *  I  K  I  L  Y  L  Y  Y  F  M  Y  K  V  L  D  L  Y  I   </first_frame>
            <second_frame>  N  P  Q  L  N  G  K  N  C  S  I  S  Y  I  I  F  I  P  Q  Q  F  L  R  P  Q  I  K  *  K  R  K  I  L  L  P  P  T  I  D  C  E  I  S  D  Y  R  *  C  Y  N  L  H  L  Q  N  *  H  *  Y  S  T  L  *  K  P  Q   : G  L  L  *  S  I  F  G  E  *  A  S  S  V  Q  G  H  F  S  *  Q  K  K  K  S  P  T  Q  S   : V  F  R  P  *  T  M  K  I  G  T  C  Y  F  F  T  Q  G  H  S  S  M  K  V  N  L  F  S  S  C  P  I  L  L  *  *  *  V  F  D  S  Y  V  I  F  V  L  T  S  V  F  I  N  L  S  L  L  L  M  N  T  I  S  V  R  K  T  K  *  R  M  *  F  S  K  Q  R  Y  R  G  F  K  *  V  P  C  *  F  Y  F  R  K  K  F  E  Q  F  S  C  E  V  V  L  F  R  C  I  S  A  S  R  Q  S   : G  R  V  E  N  S  H  A  T  H  R  V  P  V  D  H  C  L  S  S  Y  *  Y  E  I  E  M  *  N  Q  R  S  R  V  P  T  G  G  P  Q  Y  C  F  *  G  S  *  T  R  H   : N  K  M  G  A  S  G  V  G  *  C  A  E  A  I  *  V  L  T  W  C  K  R  L  S  L  P  R  Q  K  W  T  T  D  Q  A  E  R  S  T  T  D  E  Y  *  L  C  S  S  P  R  P  S  F  S  P  *  S  C  S  *  R  C  C  R  V   : G  A  K  G  T  T  A  E  H  E  E  *  S  K  R  *  L  A  H  R  L  C  R  I  Q  E  G  N  A  E  Q  L  I  S  L  N  S  Y  Y  N  Y  R  G  A  W  *  L  T  L  V  I  I  T  D  N  P  N  *  K  K  V  I  I  S  L  L  I  *  R  F  *  *  C  F  D  F  I  A  Y  R  V  I  F  S  *  P  F  E  V  F  S  *  R  V  N  *  L  L  D  S  K  L  K  Y  Y  I  Y  I  I  L  C  I  K  S  L  T  Y  I  L  </second_frame>
            <third_frame>   I  L  S  *  M  A  K  I  A  V  S  H  T  S  S  S  F  L  N  N  F  F  V  P  K  L  N  E  K  G  K  F  F  F  R  Q  Q  L  I  V  K  S  Q  I  I  D  N  A  T  T  Y  T  C  R  I  S  T  D  I  P  L  Y  E  N  P  R  :  A  C  F  D  R  Y  L  E  N  K  P  R  V  F  K  A  I  F  P  D  K  R  R  S  H  Q  L  N  Q  :  F  S  G  L  E  P  *  R  *  A  L  A  I  S  L  H  K  V  I  V  Q  *  K  S  T  C  L  A  H  V  R  Y  Y  Y  D  D  E  S  L  T  R  M  L  Y  S  S  *  H  Q  Y  L  *  I  *  V  S  C  *  *  T  Q  Y  L  F  G  K  Q  S  E  E  C  S  S  A  N  K  D  I  G  V  L  S  R  S  H  V  S  S  T  S  G  R  S  L  S  N  S  A  V  R  L  S  C  F  V  A  S  P  L  Q  G  N  Q  :  E  E  W  R  I  H  M  L  P  I  E  F  L  L  I  T  V  F  P  V  I  D  M  R  L  R  C  K  T  R  G  V  E  Y  P  P  G  V  P  N  T  V  S  K  V  L  E  L  D  I  :  I  R  W  E  L  Q  G  L  D  D  V  L  K  P  S  E  F  S  L  G  V  K  G  S  L  Y  P  D  R  N  G  P  R  T  R  L  K  G  Q  L  Q  M  S  I  S  F  V  L  P  H  V  L  A  L  V  P  E  A  V  R  R  D  V  A  E  S  :  V  L  R  G  L  L  Q  N  M  K  S  K  V  N  G  S  L  L  T  D  Y  A  E  F  K  R  E  M  Q  N  N  L  L  V  *  T  V  T  T  T  I  G  V  H  G  D  *  H  *  L  S  *  L  I  I  R  T  K  K  K  L  L  S  V  Y  *  F  S  D  F  D  N  V  L  I  L  L  L  I  G  L  S  F  L  N  R  L  R  F  F  L  N  G  L  I  D  Y  L  I  V  N  *  N  I  I  F  I  L  F  Y  V  *  S  P  *  L  I  Y  W </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92808" stop="92647"/>
                    <exon start="92342" stop="92193"/>
                    <exon start="92117" stop="91920"/>
                    <exon start="91849" stop="91745"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>612</number_coding_nucleotides>
                  <number_encoded_amino_acids>204</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TQYLFGKQSEECSSANKDIGVLSRSHVSSTSGRSLSNSAVRLSCFVASPLQGNQEEWRIHMLPIEFLLITVFPVIDMRLRCKTRGVEYPPGVPNTVSKVLELDIIRWELQGLDDVLKPSEFSLGVKGSLYPDRNGPRTRLKGQLQMSISFVLPHVLALVPEAVRRDVAESVLRGLLQNMKSKVNGSLLTDYAEFKREMQNNLLV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93939" stop="93754"/>
                    <exon start="93677" stop="93591"/>
                    <exon start="92985" stop="92965"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>291</number_coding_nucleotides>
                  <number_encoded_amino_acids>97</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MAKIAVSHTSSSFLNNFFVPKLNEKGKFFFRQQLIVKSQIIDNATTYTCRISTDIPLYENPRACFDRYLENKPRVFKAIFPDKRRSHQLNQFSGLEP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="93907" e_stop="93754"/>
            <exon e_start="93677" e_stop="93591"/>
            <exon e_start="92342" e_stop="92193"/>
            <exon e_start="92117" e_stop="91920"/>
            <exon e_start="91849" e_stop="91493"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.989" e_score="0.994"/>
          <exon-intron don_prob="0.997" acc_prob="0.946" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.889" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="93907" e_stop="93754" e_length="154"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.989">
            <gDNA_intron_boundary i_start="93753" i_stop="93678" i_length="76"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="93677" e_stop="93591" e_length="87"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.946">
            <gDNA_intron_boundary i_start="93590" i_stop="92343" i_length="1248"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="92342" e_stop="92193" e_length="150"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.953">
            <gDNA_intron_boundary i_start="92192" i_stop="92118" i_length="75"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="92117" e_stop="91920" e_length="198"/>
          </exon>
          <intron i_serial="4" don_prob="0.889" acc_prob="0.987">
            <gDNA_intron_boundary i_start="91919" i_stop="91850" i_length="70"/>
          </intron>
          <exon e_serial="5" e_score="0.991">
            <gDNA_exon_boundary e_start="91849" e_stop="91493" e_length="357"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93907" stop="93754"/>
              <exon start="93677" stop="93591"/>
              <exon start="92342" stop="92193"/>
              <exon start="92117" stop="91920"/>
              <exon start="91849" stop="91736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550297" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93907" stop="93754"/>
              <exon start="93677" stop="93591"/>
              <exon start="92342" stop="92193"/>
              <exon start="92117" stop="91920"/>
              <exon start="91849" stop="91741"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389743" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93907" stop="93754"/>
              <exon start="93677" stop="93591"/>
              <exon start="92342" stop="92193"/>
              <exon start="92117" stop="91920"/>
              <exon start="91849" stop="91839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396025" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93906" stop="93754"/>
              <exon start="93677" stop="93591"/>
              <exon start="92342" stop="92193"/>
              <exon start="92117" stop="91973"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231612" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92340" stop="92193"/>
              <exon start="92117" stop="91920"/>
              <exon start="91849" stop="91592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550096" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92213" stop="92193"/>
              <exon start="92117" stop="91920"/>
              <exon start="91849" stop="91500"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396024" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92032" stop="91920"/>
              <exon start="91849" stop="91518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732796" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91934" stop="91920"/>
              <exon start="91849" stop="91493"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220656" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91765" stop="91493"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91736" stop="91527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392901" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCACTCTATGAAAACCCCAGG : GCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAG : GAAGAGTGGAGAATTCACATGCTACCCATAGAGTTCCTGTTGATCACTGTCTTTCCAGTTATTGATATGAGATTGAGATGTAAAACCAGAGGAGTCGAGTACCCACCGGGGGTCCCCAATACTGTTTCTAAGGTTCTTGAACTCGACATA : ATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAGGTCAACTACAGATGAGTATTAGCTTTGTTCTTCCCCACGTCCTAGCTTTAGTCCCTGAAGCTGTTCGTAGAGATGTTGCAGAGTCG : GTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTAAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGGGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAATTGATTACTTGATAGTAAATTAAAATATTATATTTATATTATTTTATGTATAAAGTCCTTGACTTATATATTGG</gDNA_template>
            <first_frame> F  I  P  Q  Q  F  L  R  P  Q  I  K  *  K  R  K  I  L  L  P  P  T  I  D  C  E  I  S  D  Y  R  *  C  Y  N  L  H  L  Q  N  *  H  *  Y  S  T  L  *  K  P  Q   : G  L  L  *  S  I  F  G  E  *  A  S  S  V  Q  G  H  F  S  *  Q  K  K  K  S  P  T  Q  S   : G  R  V  E  N  S  H  A  T  H  R  V  P  V  D  H  C  L  S  S  Y  *  Y  E  I  E  M  *  N  Q  R  S  R  V  P  T  G  G  P  Q  Y  C  F  *  G  S  *  T  R  H   : N  K  M  G  A  S  G  V  G  *  C  A  E  A  I  *  V  L  T  W  C  K  R  L  S  L  P  R  Q  K  W  T  T  D  Q  A  E  R  S  T  T  D  E  Y  *  L  C  S  S  P  R  P  S  F  S  P  *  S  C  S  *  R  C  C  R  V   : G  A  K  G  T  T  A  E  H  E  E  *  S  K  R  *  L  A  H  R  L  C  R  I  Q  E  G  N  A  E  Q  L  I  S  L  N  S  Y  Y  N  Y  R  G  A  W  *  L  T  L  V  I  I  T  D  N  P  N  *  K  K  V  I  I  S  L  L  I  *  R  F  *  *  C  F  D  F  I  A  Y  R  V  I  F  S  *  P  F  E  V  F  S  *  R  V  N  *  L  L  D  S  K  L  K  Y  Y  I  Y  I  I  L  C  I  K  S  L  T  Y  I  L  </first_frame>
            <second_frame>  S  F  L  N  N  F  F  V  P  K  L  N  E  K  G  K  F  F  F  R  Q  Q  L  I  V  K  S  Q  I  I  D  N  A  T  T  Y  T  C  R  I  S  T  D  I  P  L  Y  E  N  P  R  :  A  C  F  D  R  Y  L  E  N  K  P  R  V  F  K  A  I  F  P  D  K  R  R  S  H  Q  L  N  Q  :  E  E  W  R  I  H  M  L  P  I  E  F  L  L  I  T  V  F  P  V  I  D  M  R  L  R  C  K  T  R  G  V  E  Y  P  P  G  V  P  N  T  V  S  K  V  L  E  L  D  I  :  I  R  W  E  L  Q  G  L  D  D  V  L  K  P  S  E  F  S  L  G  V  K  G  S  L  Y  P  D  R  N  G  P  R  T  R  L  K  G  Q  L  Q  M  S  I  S  F  V  L  P  H  V  L  A  L  V  P  E  A  V  R  R  D  V  A  E  S  :  V  L  R  G  L  L  Q  N  M  K  S  K  V  N  G  S  L  L  T  D  Y  A  E  F  K  R  E  M  Q  N  N  L  L  V  *  T  V  T  T  T  I  G  V  H  G  D  *  H  *  L  S  *  L  I  I  R  T  K  K  K  L  L  S  V  Y  *  F  S  D  F  D  N  V  L  I  L  L  L  I  G  L  S  F  L  N  R  L  R  F  F  L  N  G  L  I  D  Y  L  I  V  N  *  N  I  I  F  I  L  F  Y  V  *  S  P  *  L  I  Y  W </second_frame>
            <third_frame>   H  S  S  T  I  S  S  S  P  N  *  M  K  K  E  N  S  S  S  A  N  N  *  L  *  N  L  R  L  *  I  M  L  Q  L  T  L  A  E  L  A  L  I  F  H  S  M  K  T  P  G :   L  A  L  I  D  I  W  R  I  S  L  E  C  S  R  P  F  F  L  T  K  E  E  V  T  N  S  I  R :   K  S  G  E  F  T  C  Y  P  *  S  S  C  *  S  L  S  F  Q  L  L  I  *  D  *  D  V  K  P  E  E  S  S  T  H  R  G  S  P  I  L  F  L  R  F  L  N  S  T  * :   *  D  G  S  F  R  G  W  M  M  C  *  S  H  L  S  S  H  L  V  *  K  A  L  F  T  P  T  E  M  D  H  G  P  G  *  K  V  N  Y  R  *  V  L  A  L  F  F  P  T  S  *  L  *  S  L  K  L  F  V  E  M  L  Q  S  R :   C  *  G  D  Y  C  R  T  *  R  V  K  *  T  V  A  C  S  Q  T  M  P  N  S  R  G  K  C  R  T  T  Y  *  S  E  Q  L  L  Q  L  *  G  C  M  V  I  N  T  S  Y  H  N  *  *  S  E  L  K  K  S  Y  Y  Q  F  I  D  L  A  I  L  I  M  F  *  F  Y  C  L  S  G  Y  L  F  L  T  V  *  G  F  F  L  T  G  *  L  I  T  *  *  *  I  K  I  L  Y  L  Y  Y  F  M  Y  K  V  L  D  L  Y  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="19" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93906" stop="93754"/>
                    <exon start="93677" stop="93591"/>
                    <exon start="92342" stop="92193"/>
                    <exon start="92117" stop="91920"/>
                    <exon start="91849" stop="91745"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>690</number_coding_nucleotides>
                  <number_encoded_amino_acids>230</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFLNNFFVPKLNEKGKFFFRQQLIVKSQIIDNATTYTCRISTDIPLYENPRACFDRYLENKPRVFKAIFPDKRRSHQLNQEEWRIHMLPIEFLLITVFPVIDMRLRCKTRGVEYPPGVPNTVSKVLELDIIRWELQGLDDVLKPSEFSLGVKGSLYPDRNGPRTRLKGQLQMSISFVLPHVLALVPEAVRRDVAESVLRGLLQNMKSKVNGSLLTDYAEFKREMQNNLLV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="92225" e_stop="92193"/>
            <exon e_start="92117" e_stop="92006"/>
            <exon e_start="91849" e_stop="91493"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.112" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92225" e_stop="92193" e_length="33"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.953">
            <gDNA_intron_boundary i_start="92192" i_stop="92118" i_length="75"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92117" e_stop="92006" e_length="112"/>
          </exon>
          <intron i_serial="2" don_prob="0.112" acc_prob="0.987">
            <gDNA_intron_boundary i_start="92005" i_stop="91850" i_length="156"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="91849" e_stop="91493" e_length="357"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92225" stop="92193"/>
              <exon start="92117" stop="92006"/>
              <exon start="91849" stop="91502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220822" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92057" stop="92006"/>
              <exon start="91849" stop="91502"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E221230" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91765" stop="91493"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222138" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91736" stop="91527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392901" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATACTGTTTCTAAGGTTCTTGAACTCGACATA : ATAAGATGGGAGCTTCAGGGGTTGGATGATGTGCTGAAGCCATCTGAGTTCTCACTTGGTGTAAAAGGCTCTCTTTACCCCGACAGAAATGGACCACGGACCAGGCTGAAAG : GTGCTAAGGGGACTACTGCAGAACATGAAGAGTAAAGTAAACGGTAGCTTGCTCACAGACTATGCCGAATTCAAGAGGGAAATGCAGAACAACTTATTAGTCTGAACAGTTACTACAACTATAGGGGTGCATGGTGATTAACACTAGTTATCATAACTGATAATCCGAACTAAAAAAAAGTTATTATCAGTTTATTGATTTAGCGATTTTGATAATGTTTTGATTTTATTGCTTATCGGGTTATCTTTTCTTAACCGTTTGAGGTTTTTTCTTAACGGGTTAATTGATTACTTGATAGTAAATTAAAATATTATATTTATATTATTTTATGTATAAAGTCCTTGACTTATATATTGG</gDNA_template>
            <first_frame> N  T  V  S  K  V  L  E  L  D  I  :  I  R  W  E  L  Q  G  L  D  D  V  L  K  P  S  E  F  S  L  G  V  K  G  S  L  Y  P  D  R  N  G  P  R  T  R  L  K   : G  A  K  G  T  T  A  E  H  E  E  *  S  K  R  *  L  A  H  R  L  C  R  I  Q  E  G  N  A  E  Q  L  I  S  L  N  S  Y  Y  N  Y  R  G  A  W  *  L  T  L  V  I  I  T  D  N  P  N  *  K  K  V  I  I  S  L  L  I  *  R  F  *  *  C  F  D  F  I  A  Y  R  V  I  F  S  *  P  F  E  V  F  S  *  R  V  N  *  L  L  D  S  K  L  K  Y  Y  I  Y  I  I  L  C  I  K  S  L  T  Y  I  L  </first_frame>
            <second_frame>  I  L  F  L  R  F  L  N  S  T  * :   *  D  G  S  F  R  G  W  M  M  C  *  S  H  L  S  S  H  L  V  *  K  A  L  F  T  P  T  E  M  D  H  G  P  G  *  K  :  V  L  R  G  L  L  Q  N  M  K  S  K  V  N  G  S  L  L  T  D  Y  A  E  F  K  R  E  M  Q  N  N  L  L  V  *  T  V  T  T  T  I  G  V  H  G  D  *  H  *  L  S  *  L  I  I  R  T  K  K  K  L  L  S  V  Y  *  F  S  D  F  D  N  V  L  I  L  L  L  I  G  L  S  F  L  N  R  L  R  F  F  L  N  G  L  I  D  Y  L  I  V  N  *  N  I  I  F  I  L  F  Y  V  *  S  P  *  L  I  Y  W </second_frame>
            <third_frame>   Y  C  F  *  G  S  *  T  R  H   : N  K  M  G  A  S  G  V  G  *  C  A  E  A  I  *  V  L  T  W  C  K  R  L  S  L  P  R  Q  K  W  T  T  D  Q  A  E  R :   C  *  G  D  Y  C  R  T  *  R  V  K  *  T  V  A  C  S  Q  T  M  P  N  S  R  G  K  C  R  T  T  Y  *  S  E  Q  L  L  Q  L  *  G  C  M  V  I  N  T  S  Y  H  N  *  *  S  E  L  K  K  S  Y  Y  Q  F  I  D  L  A  I  L  I  M  F  *  F  Y  C  L  S  G  Y  L  F  L  T  V  *  G  F  F  L  T  G  *  L  I  T  *  *  *  I  K  I  L  Y  L  Y  Y  F  M  Y  K  V  L  D  L  Y  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0280E02.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="93996" e_stop="93754"/>
            <exon e_start="93677" e_stop="93175"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.989" e_score="0.992"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="93996" e_stop="93754" e_length="243"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.989">
            <gDNA_intron_boundary i_start="93753" i_stop="93678" i_length="76"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="93677" e_stop="93175" e_length="503"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93996" stop="93754"/>
              <exon start="93677" stop="93175"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348266" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93996" stop="93754"/>
              <exon start="93677" stop="93396"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313238" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93990" stop="93754"/>
              <exon start="93677" stop="93211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314199" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTAATGGAGTCCTTGTCAAAATCATTAGACCATTCAATTAAGTAATCCTCAGCTAAATGGCAAAAATTGCAGTATCTCATACATCATCTTCATTCCTCAACAATTTCTTCGTCCCCAAATTAAATGAAAAAGGAAAATTCTTCTTCCGCCAACAATTGATTGTGAAATCTCAGATTATAGATAATGCTACAACTTACACTTGCAGAATTAGCACTGATATTCCACTCTATGAAAACCCCAGG : GCTTGCTTTGATCGATATTTGGAGAATAAGCCTCGAGTGTTCAAGGCCATTTTTCCTGACAAAAGAAGAAGTCACCAACTCAATCAGGTATTCATCACCAATAATTTGTTTTCTACTCCATGGGGAAATACTTAATTTATGAACTAATTTTAGCATCCTTTTATATCTTGTTTGGTTACTAACATATCTGAATTAGTTACCTCTGCCTTGAAAGTGAGTGGGGTAGTAGTAATGGGATTAGTTATCTCGAGATAAAACAATGAAAAATGACAAAAACACCCCTGAGGTCCTTCGAGGAAGGGTATCTTTGTAAACAAATAATTTGTTGGAAATTATGCAAACTTGTTTTCAACCAAATGGCCCCTTCGAGTTAGAGTTAAGAGGCCACAGGTCCATTTTTTCAACTGAGTATCCGTTTCTGTTCTTGGTTTATCCAATGTTGAGCCCACATTTTATATTGACCAAGTCTCATAGGTTGGGTCCTGGGATGTTGGAGGGGTTAA</gDNA_template>
            <first_frame> I  N  G  V  L  V  K  I  I  R  P  F  N  *  V  I  L  S  *  M  A  K  I  A  V  S  H  T  S  S  S  F  L  N  N  F  F  V  P  K  L  N  E  K  G  K  F  F  F  R  Q  Q  L  I  V  K  S  Q  I  I  D  N  A  T  T  Y  T  C  R  I  S  T  D  I  P  L  Y  E  N  P  R  :  A  C  F  D  R  Y  L  E  N  K  P  R  V  F  K  A  I  F  P  D  K  R  R  S  H  Q  L  N  Q  V  F  I  T  N  N  L  F  S  T  P  W  G  N  T  *  F  M  N  *  F  *  H  P  F  I  S  C  L  V  T  N  I  S  E  L  V  T  S  A  L  K  V  S  G  V  V  V  M  G  L  V  I  S  R  *  N  N  E  K  *  Q  K  H  P  *  G  P  S  R  K  G  I  F  V  N  K  *  F  V  G  N  Y  A  N  L  F  S  T  K  W  P  L  R  V  R  V  K  R  P  Q  V  H  F  F  N  *  V  S  V  S  V  L  G  L  S  N  V  E  P  T  F  Y  I  D  Q  V  S  *  V  G  S  W  D  V  G  G  V   </first_frame>
            <second_frame>  L  M  E  S  L  S  K  S  L  D  H  S  I  K  *  S  S  A  K  W  Q  K  L  Q  Y  L  I  H  H  L  H  S  S  T  I  S  S  S  P  N  *  M  K  K  E  N  S  S  S  A  N  N  *  L  *  N  L  R  L  *  I  M  L  Q  L  T  L  A  E  L  A  L  I  F  H  S  M  K  T  P  G :   L  A  L  I  D  I  W  R  I  S  L  E  C  S  R  P  F  F  L  T  K  E  E  V  T  N  S  I  R  Y  S  S  P  I  I  C  F  L  L  H  G  E  I  L  N  L  *  T  N  F  S  I  L  L  Y  L  V  W  L  L  T  Y  L  N  *  L  P  L  P  *  K  *  V  G  *  *  *  W  D  *  L  S  R  D  K  T  M  K  N  D  K  N  T  P  E  V  L  R  G  R  V  S  L  *  T  N  N  L  L  E  I  M  Q  T  C  F  Q  P  N  G  P  F  E  L  E  L  R  G  H  R  S  I  F  S  T  E  Y  P  F  L  F  L  V  Y  P  M  L  S  P  H  F  I  L  T  K  S  H  R  L  G  P  G  M  L  E  G  L  </second_frame>
            <third_frame>   *  W  S  P  C  Q  N  H  *  T  I  Q  L  S  N  P  Q  L  N  G  K  N  C  S  I  S  Y  I  I  F  I  P  Q  Q  F  L  R  P  Q  I  K  *  K  R  K  I  L  L  P  P  T  I  D  C  E  I  S  D  Y  R  *  C  Y  N  L  H  L  Q  N  *  H  *  Y  S  T  L  *  K  P  Q   : G  L  L  *  S  I  F  G  E  *  A  S  S  V  Q  G  H  F  S  *  Q  K  K  K  S  P  T  Q  S  G  I  H  H  Q  *  F  V  F  Y  S  M  G  K  Y  L  I  Y  E  L  I  L  A  S  F  Y  I  L  F  G  Y  *  H  I  *  I  S  Y  L  C  L  E  S  E  W  G  S  S  N  G  I  S  Y  L  E  I  K  Q  *  K  M  T  K  T  P  L  R  S  F  E  E  G  Y  L  C  K  Q  I  I  C  W  K  L  C  K  L  V  F  N  Q  M  A  P  S  S  *  S  *  E  A  T  G  P  F  F  Q  L  S  I  R  F  C  S  W  F  I  Q  C  *  A  H  I  L  Y  *  P  S  L  I  G  W  V  L  G  C  W  R  G  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="19" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93939" stop="93754"/>
                    <exon start="93677" stop="93543"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>318</number_coding_nucleotides>
                  <number_encoded_amino_acids>106</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MAKIAVSHTSSSFLNNFFVPKLNEKGKFFFRQQLIVKSQIIDNATTYTCRISTDIPLYENPRACFDRYLENKPRVFKAIFPDKRRSHQLNQVFITNNLFSTPWGNT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="91544" PGL_stop="91757"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91544" e_stop="91757"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="91544" e_stop="91757" e_length="214"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91544" stop="91757"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313005" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAATTTACTATCAAGTAATCAATTAACCCGTTAAGAAAAAACCTCAAACGGTTAAGAAAAGATAACCCGATAAGCAATAAAATCAAAACATTATCAAAATCGCTAAATCAATAAACTGATAATAACTTTTTTTTAGTTCGGATTATCAGTTATGATAACTAGTGTTAATCACCATGCACCCCTATAGTTGTAGTAACTGTTCAGACTAATAAG</gDNA_template>
            <first_frame> L  I  Y  Y  Q  V  I  N  *  P  V  K  K  K  P  Q  T  V  K  K  R  *  P  D  K  Q  *  N  Q  N  I  I  K  I  A  K  S  I  N  *  *  *  L  F  F  S  S  D  Y  Q  L  *  *  L  V  L  I  T  M  H  P  Y  S  C  S  N  C  S  D  *  *  </first_frame>
            <second_frame>  *  F  T  I  K  *  S  I  N  P  L  R  K  N  L  K  R  L  R  K  D  N  P  I  S  N  K  I  K  T  L  S  K  S  L  N  Q  *  T  D  N  N  F  F  L  V  R  I  I  S  Y  D  N  *  C  *  S  P  C  T  P  I  V  V  V  T  V  Q  T  N  K </second_frame>
            <third_frame>   N  L  L  S  S  N  Q  L  T  R  *  E  K  T  S  N  G  *  E  K  I  T  R  *  A  I  K  S  K  H  Y  Q  N  R  *  I  N  K  L  I  I  T  F  F  *  F  G  L  S  V  M  I  T  S  V  N  H  H  A  P  L  *  L  *  *  L  F  R  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0280E02.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="+" PGL_start="94871" PGL_stop="97636"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94871" e_stop="94925"/>
            <exon e_start="95055" e_stop="96189"/>
            <exon e_start="96263" e_stop="96739"/>
            <exon e_start="96821" e_stop="97348"/>
            <exon e_start="97449" e_stop="97636"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.939" acc_prob="0.994" e_score="0.982"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.965"/>
          <exon-intron don_prob="0.953" acc_prob="1.000" e_score="0.983"/>
          <exon-intron don_prob="0.982" acc_prob="0.999" e_score="0.975"/>
          <exon-only e_score="0.936"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="94871" e_stop="94925" e_length="55"/>
          </exon>
          <intron i_serial="1" don_prob="0.939" acc_prob="0.994">
            <gDNA_intron_boundary i_start="94926" i_stop="95054" i_length="129"/>
          </intron>
          <exon e_serial="2" e_score="0.965">
            <gDNA_exon_boundary e_start="95055" e_stop="96189" e_length="1135"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="96190" i_stop="96262" i_length="73"/>
          </intron>
          <exon e_serial="3" e_score="0.983">
            <gDNA_exon_boundary e_start="96263" e_stop="96739" e_length="477"/>
          </exon>
          <intron i_serial="3" don_prob="0.953" acc_prob="1.000">
            <gDNA_intron_boundary i_start="96740" i_stop="96820" i_length="81"/>
          </intron>
          <exon e_serial="4" e_score="0.975">
            <gDNA_exon_boundary e_start="96821" e_stop="97348" e_length="528"/>
          </exon>
          <intron i_serial="4" don_prob="0.982" acc_prob="0.999">
            <gDNA_intron_boundary i_start="97349" i_stop="97448" i_length="100"/>
          </intron>
          <exon e_serial="5" e_score="0.936">
            <gDNA_exon_boundary e_start="97449" e_stop="97636" e_length="188"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94871" stop="94925"/>
              <exon start="95055" stop="95650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95584" stop="96189"/>
              <exon start="96263" stop="96310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276288" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96127" stop="96189"/>
              <exon start="96263" stop="96739"/>
              <exon start="96821" stop="96890"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274114" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96438" stop="96739"/>
              <exon start="96821" stop="96964"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96839" stop="97348"/>
              <exon start="97449" stop="97636"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538686" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96840" stop="97348"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275102" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTCTTGTTATTCTTCAAATTTTCTAAAGTTTTTAAAAGCATTTTCTTTATAAG : ATATGCATCTGTCAAATTTATACGTACATCCTGGTCCAGTAGAGCATGATGTATTAAAAATTCAAGTTCATCATCGTTCCGAAGGAATTTGGAACGGTAGCATAAAAGAAGAGAGATGTTGCTTATATACGCGTCGTGGTGATATTGAATTTTGGCAACATTTAAAATATCATCCATTACATTCTCGCATCCTTCAATATTTTGAAAATTATAGATTTAAAGGAATTCTTGATGTTGGATGTGTGTCGTATGACTCCGGATTAATTTCTGCTTTAATTGGAAAGTGGCGTCGAAAACTCATACTTTTCACATGCGAACTGGCGAGGCTACCATAACTTTACAAGATATTGAAATTTTATTCGGAATGGTAGTAGATGGTAGACCTATAATTTTAAATGGAGCTGATTCTCTAGGGATTATAGGTAGATAAGAAATGATTTTTCAATTAACAGGATGGTTACCCGATACTAGTTGTTTTTCTGGTGTTAGTAGATTGTTAACATATAAATTGATTGAGTATATAGAATGTTTGGAAGTTATTAATGATAACTCAACTGAGCATGAAGTTCAACAAAAATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGGATCGGCCGCATTATCATATTTGTATAATTGTTTATGCCATGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGCAGATATACATATTTTTAATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCAAAAGCCTCTAAGAACCAATCAATTTGAGGCTTCAACTGTGCTTGCACGTAAATGGACGTGACGTAGACTTTATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTCACTGATGAACAGGTATTTAATATTATTAGTATCTTAAACTTTTCATATTTTATTTTATTTTAAATAAGAATATATTTG : TTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTTATAGTTTATTTGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGGATGGCACAGGTGCCACTGATTTATGGAATTTATCGTGAGTGGCACATGGTTGATCGTGTTGTGAGACAGTTCGATTATTTACAACATATTCCTGGACCGTGTACCCAATTTTCCGAATATCATTTTAAGCGTGATAAACGATCTATAATAAAATAAGAAGATATAGATGCATTTAACTATACACAATATTTATGGGAACAACGTCAAAATCGTATATTTCGACCTCCATTTGTAAGTGATCAAACAGATTACTTTCGATGGTACATAAGGCATACCCGCATGGTCATTGGAAATCCACAACATGTTGTACAAAAAGGGTATCAACACATGGCAGGAAGACATGAGGCATTA : GCTAGGGGTCATGAAATGCAGTATCGTCGAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGCGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCGGCCTTTCAGGAAACGCGATTGAGCTTTGATCCTGATTACAATCCTCCCACTCAATACGATGAACCACCACCAGTACAAGTATCTCGCCGATCACGACAAACAACACCGAGAGAGGGTGCTTGTCGAGGTAGAAGGACCACTGGTGAAACAACTGATTTTTCTGCAAGGCCCTCTAACACTAATGTGGCGACTCCAGAGCCTTATTATCCCACATTTGATTTTTCTGCAGGGCCCTCTAACACTAATCCGAATTTTTCTAGTCAGCAAACAGTTGGTTTTGTAACTCCGCAGGTTCCAATATCTGGGTTTGCACAATTTAGTGGTTCTCAATATGGTTTTCAACATGGTATGCGTGAATTTTCGATACATAATTCTCCATTTGGTGGAAGATGGAATTTTTCGAAT : GTAATTGCGTTTGATGATTCAAGATTGAATGCTGGGGCTTCACAAAATTTAGTTCTTAATAGACAAAATCCACCTCGGAGAACATCTAGGCTACACAAATCAACTAGATATGGAACAGGCAGTCACTATCAAAATGAGGAAGATTTTGAAAATGAAGATGAAAATGAAGATTCGGATTCAGAAGAATA</gDNA_template>
            <first_frame> N  S  C  Y  S  S  N  F  L  K  F  L  K  A  F  S  L  *   : D  M  H  L  S  N  L  Y  V  H  P  G  P  V  E  H  D  V  L  K  I  Q  V  H  H  R  S  E  G  I  W  N  G  S  I  K  E  E  R  C  C  L  Y  T  R  R  G  D  I  E  F  W  Q  H  L  K  Y  H  P  L  H  S  R  I  L  Q  Y  F  E  N  Y  R  F  K  G  I  L  D  V  G  C  V  S  Y  D  S  G  L  I  S  A  L  I  G  K  W  R  R  K  L  I  L  F  T  C  E  L  A  R  L  P  *  L  Y  K  I  L  K  F  Y  S  E  W  *  *  M  V  D  L  *  F  *  M  E  L  I  L  *  G  L  *  V  D  K  K  *  F  F  N  *  Q  D  G  Y  P  I  L  V  V  F  L  V  L  V  D  C  *  H  I  N  *  L  S  I  *  N  V  W  K  L  L  M  I  T  Q  L  S  M  K  F  N  K  N  L  D  Y  I  Y  Y  G  Y  V  V  D  Q  Y  F  R  I  N  L  I  I  R  L  I  W  T  F  *  L  T  *  E  I  *  I  *  C  Q  L  K  H  G  D  R  P  H  Y  H  I  C  I  I  V  Y  A  M  R  Q  *  K  N  Q  M  K  F  V  D  F  S  L  *  C  R  Y  T  Y  F  *  L  N  I  F  Y  I  L  V  I  C  T  F  K  F  K  C  I  I  S  N  G  E  F  I  Y  C  R  F  G  H  G  K  E  L  F  P  C  N  H  C  K  S  L  *  E  P  I  N  L  R  L  Q  L  C  L  H  V  N  G  R  D  V  D  F  I  K  M  R  H  E  L  *  S  V  *  L  G  M  Y  L  I  I  S  L  M  N  R  Y  L  I  L  L  V  S  *  T  F  H  I  L  F  Y  F  K  *  E  Y  I  C :   F  C  Q  C  C  F  Y  N  Y  L  T  *  L  F  F  Y  S  L  F  G  S  L  I  R  K  M  L  L  M  D  C  L  S  G  V  G  Q  D  N  V  S  G  W  H  R  C  H  *  F  M  E  F  I  V  S  G  T  W  L  I  V  L  *  D  S  S  I  I  Y  N  I  F  L  D  R  V  P  N  F  P  N  I  I  L  S  V  I  N  D  L  *  *  N  K  K  I  *  M  H  L  T  I  H  N  I  Y  G  N  N  V  K  I  V  Y  F  D  L  H  L  *  V  I  K  Q  I  T  F  D  G  T  *  G  I  P  A  W  S  L  E  I  H  N  M  L  Y  K  K  G  I  N  T  W  Q  E  D  M  R  H  * :   L  G  V  M  K  C  S  I  V  E  L  G  *  L  K  M  M  K  I  N  L  M  K  *  D  N  M  Q  R  K  S  L  V  F  Q  W  S  Q  *  M  R  P  F  R  K  R  D  *  A  L  I  L  I  T  I  L  P  L  N  T  M  N  H  H  Q  Y  K  Y  L  A  D  H  D  K  Q  H  R  E  R  V  L  V  E  V  E  G  P  L  V  K  Q  L  I  F  L  Q  G  P  L  T  L  M  W  R  L  Q  S  L  I  I  P  H  L  I  F  L  Q  G  P  L  T  L  I  R  I  F  L  V  S  K  Q  L  V  L  *  L  R  R  F  Q  Y  L  G  L  H  N  L  V  V  L  N  M  V  F  N  M  V  C  V  N  F  R  Y  I  I  L  H  L  V  E  D  G  I  F  R  M :   *  L  R  L  M  I  Q  D  *  M  L  G  L  H  K  I  *  F  L  I  D  K  I  H  L  G  E  H  L  G  Y  T  N  Q  L  D  M  E  Q  A  V  T  I  K  M  R  K  I  L  K  M  K  M  K  M  K  I  R  I  Q  K  N  </first_frame>
            <second_frame>  I  L  V  I  L  Q  I  F  *  S  F  *  K  H  F  L  Y  K  :  I  C  I  C  Q  I  Y  T  Y  I  L  V  Q  *  S  M  M  Y  *  K  F  K  F  I  I  V  P  K  E  F  G  T  V  A  *  K  K  R  D  V  A  Y  I  R  V  V  V  I  L  N  F  G  N  I  *  N  I  I  H  Y  I  L  A  S  F  N  I  L  K  I  I  D  L  K  E  F  L  M  L  D  V  C  R  M  T  P  D  *  F  L  L  *  L  E  S  G  V  E  N  S  Y  F  S  H  A  N  W  R  G  Y  H  N  F  T  R  Y  *  N  F  I  R  N  G  S  R  W  *  T  Y  N  F  K  W  S  *  F  S  R  D  Y  R  *  I  R  N  D  F  S  I  N  R  M  V  T  R  Y  *  L  F  F  W  C  *  *  I  V  N  I  *  I  D  *  V  Y  R  M  F  G  S  Y  *  *  *  L  N  *  A  *  S  S  T  K  I  *  I  I  F  I  M  V  M  W  W  I  N  I  S  G  *  I  *  *  *  D  *  F  G  H  F  D  *  H  E  K  F  R  F  N  V  N  S  S  M  G  I  G  R  I  I  I  F  V  *  L  F  M  P  C  V  N  E  K  I  K  *  S  L  W  I  S  L  F  S  A  D  I  H  I  F  N  *  I  F  F  I  Y  *  *  Y  A  L  L  N  L  S  A  L  *  V  M  V  N  L  F  I  V  D  L  G  M  G  K  N  Y  S  P  A  T  I  A  K  A  S  K  N  Q  S  I  *  G  F  N  C  A  C  T  *  M  D  V  T  *  T  L  S  K  *  G  T  N  C  N  R  C  D  *  G  C  T  *  *  S  H  *  *  T  G  I  *  Y  Y  *  Y  L  K  L  F  I  F  Y  F  I  L  N  K  N  I  F   : V  S  A  N  V  V  F  I  I  I  L  L  N  Y  F  F  I  V  Y  L  A  A  L  F  G  R  C  Y  *  W  I  A  *  V  V  S  V  R  T  T  C  L  D  G  T  G  A  T  D  L  W  N  L  S  *  V  A  H  G  *  S  C  C  E  T  V  R  L  F  T  T  Y  S  W  T  V  Y  P  I  F  R  I  S  F  *  A  *  *  T  I  Y  N  K  I  R  R  Y  R  C  I  *  L  Y  T  I  F  M  G  T  T  S  K  S  Y  I  S  T  S  I  C  K  *  S  N  R  L  L  S  M  V  H  K  A  Y  P  H  G  H  W  K  S  T  T  C  C  T  K  R  V  S  T  H  G  R  K  T  *  G  I   : S  *  G  S  *  N  A  V  S  S  S  S  D  D  *  K  *  *  K  S  I  *  *  N  E  T  I  C  S  G  S  R  S  Y  F  N  G  V  N  E  C  G  L  S  G  N  A  I  E  L  *  S  *  L  Q  S  S  H  S  I  R  *  T  T  T  S  T  S  I  S  P  I  T  T  N  N  T  E  R  G  C  L  S  R  *  K  D  H  W  *  N  N  *  F  F  C  K  A  L  *  H  *  C  G  D  S  R  A  L  L  S  H  I  *  F  F  C  R  A  L  *  H  *  S  E  F  F  *  S  A  N  S  W  F  C  N  S  A  G  S  N  I  W  V  C  T  I  *  W  F  S  I  W  F  S  T  W  Y  A  *  I  F  D  T  *  F  S  I  W  W  K  M  E  F  F  E   : C  N  C  V  *  *  F  K  I  E  C  W  G  F  T  K  F  S  S  *  *  T  K  S  T  S  E  N  I  *  A  T  Q  I  N  *  I  W  N  R  Q  S  L  S  K  *  G  R  F  *  K  *  R  *  K  *  R  F  G  F  R  R  I </second_frame>
            <third_frame>   F  L  L  F  F  K  F  S  K  V  F  K  S  I  F  F  I  R :   Y  A  S  V  K  F  I  R  T  S  W  S  S  R  A  *  C  I  K  N  S  S  S  S  S  F  R  R  N  L  E  R  *  H  K  R  R  E  M  L  L  I  Y  A  S  W  *  Y  *  I  L  A  T  F  K  I  S  S  I  T  F  S  H  P  S  I  F  *  K  L  *  I  *  R  N  S  *  C  W  M  C  V  V  *  L  R  I  N  F  C  F  N  W  K  V  A  S  K  T  H  T  F  H  M  R  T  G  E  A  T  I  T  L  Q  D  I  E  I  L  F  G  M  V  V  D  G  R  P  I  I  L  N  G  A  D  S  L  G  I  I  G  R  *  E  M  I  F  Q  L  T  G  W  L  P  D  T  S  C  F  S  G  V  S  R  L  L  T  Y  K  L  I  E  Y  I  E  C  L  E  V  I  N  D  N  S  T  E  H  E  V  Q  Q  K  F  R  L  Y  L  L  W  L  C  G  G  S  I  F  P  D  K  S  N  N  K  I  N  L  D  I  L  I  D  M  R  N  L  D  L  M  S  T  Q  A  W  G  S  A  A  L  S  Y  L  Y  N  C  L  C  H  A  S  M  K  K  S  N  E  V  C  G  F  L  S  L  V  Q  I  Y  I  F  L  I  K  Y  F  L  Y  T  S  N  M  H  F  *  I  *  V  H  Y  K  *  W  *  I  Y  L  L  *  I  W  A  W  E  R  I  I  P  L  Q  P  L  Q  K  P  L  R  T  N  Q  F  E  A  S  T  V  L  A  R  K  W  T  *  R  R  L  Y  Q  N  E  A  R  T  V  I  G  V  I  R  D  V  L  D  N  L  T  D  E  Q  V  F  N  I  I  S  I  L  N  F  S  Y  F  I  L  F  *  I  R  I  Y  L  :  F  L  P  M  L  F  L  *  L  S  Y  L  I  I  F  L  *  F  I  W  Q  P  Y  S  E  D  V  I  N  G  L  P  E  W  C  R  S  G  Q  R  V  W  M  A  Q  V  P  L  I  Y  G  I  Y  R  E  W  H  M  V  D  R  V  V  R  Q  F  D  Y  L  Q  H  I  P  G  P  C  T  Q  F  S  E  Y  H  F  K  R  D  K  R  S  I  I  K  *  E  D  I  D  A  F  N  Y  T  Q  Y  L  W  E  Q  R  Q  N  R  I  F  R  P  P  F  V  S  D  Q  T  D  Y  F  R  W  Y  I  R  H  T  R  M  V  I  G  N  P  Q  H  V  V  Q  K  G  Y  Q  H  M  A  G  R  H  E  A  L  :  A  R  G  H  E  M  Q  Y  R  R  A  R  M  I  E  N  D  E  N  Q  S  N  E  M  R  Q  Y  A  A  E  V  A  R  I  S  M  E  S  M  N  A  A  F  Q  E  T  R  L  S  F  D  P  D  Y  N  P  P  T  Q  Y  D  E  P  P  P  V  Q  V  S  R  R  S  R  Q  T  T  P  R  E  G  A  C  R  G  R  R  T  T  G  E  T  T  D  F  S  A  R  P  S  N  T  N  V  A  T  P  E  P  Y  Y  P  T  F  D  F  S  A  G  P  S  N  T  N  P  N  F  S  S  Q  Q  T  V  G  F  V  T  P  Q  V  P  I  S  G  F  A  Q  F  S  G  S  Q  Y  G  F  Q  H  G  M  R  E  F  S  I  H  N  S  P  F  G  G  R  W  N  F  S  N  :  V  I  A  F  D  D  S  R  L  N  A  G  A  S  Q  N  L  V  L  N  R  Q  N  P  P  R  R  T  S  R  L  H  K  S  T  R  Y  G  T  G  S  H  Y  Q  N  E  E  D  F  E  N  E  D  E  N  E  D  S  D  S  E  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96545" stop="96739"/>
                    <exon start="96821" stop="97348"/>
                    <exon start="97449" stop="97634"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>909</number_coding_nucleotides>
                  <number_encoded_amino_acids>303</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EDIDAFNYTQYLWEQRQNRIFRPPFVSDQTDYFRWYIRHTRMVIGNPQHVVQKGYQHMAGRHEALARGHEMQYRRARMIENDENQSNEMRQYAAEVARISMESMNAAFQETRLSFDPDYNPPTQYDEPPPVQVSRRSRQTTPREGACRGRRTTGETTDFSARPSNTNVATPEPYYPTFDFSAGPSNTNPNFSSQQTVGFVTPQVPISGFAQFSGSQYGFQHGMREFSIHNSPFGGRWNFSNVIAFDDSRLNAGASQNLVLNRQNPPRRTSRLHKSTRYGTGSHYQNEEDFENEDENEDSDSEE</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="95485" stop="95901"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>414</number_coding_nucleotides>
                  <number_encoded_amino_acids>138</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EMIFQLTGWLPDTSCFSGVSRLLTYKLIEYIECLEVINDNSTEHEVQQKFRLYLLWLCGGSIFPDKSNNKINLDILIDMRNLDLMSTQAWGSAALSYLYNCLCHASMKKSNEVCGFLSLVQIYIFLIKYFLYTSNMHF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94925" stop="95389"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>333</number_coding_nucleotides>
                  <number_encoded_amino_acids>111</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DMHLSNLYVHPGPVEHDVLKIQVHHRSEGIWNGSIKEERCCLYTRRGDIEFWQHLKYHPLHSRILQYFENYRFKGILDVGCVSYDSGLISALIGKWRRKLILFTCELARLP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96314" stop="96544"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FIWQPYSEDVINGLPEWCRSGQRVWMAQVPLIYGIYREWHMVDRVVRQFDYLQHIPGPCTQFSEYHFKRDKRSIIK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="94871" e_stop="94925"/>
            <exon e_start="95055" e_stop="95847"/>
            <exon e_start="95944" e_stop="96185"/>
            <exon e_start="96259" e_stop="96739"/>
            <exon e_start="96821" e_stop="97348"/>
            <exon e_start="97449" e_stop="97636"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.939" acc_prob="0.994" e_score="0.982"/>
          <exon-intron don_prob="0.000" acc_prob="0.990" e_score="0.963"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.950"/>
          <exon-intron don_prob="0.953" acc_prob="1.000" e_score="0.986"/>
          <exon-intron don_prob="0.982" acc_prob="0.999" e_score="0.975"/>
          <exon-only e_score="0.936"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="94871" e_stop="94925" e_length="55"/>
          </exon>
          <intron i_serial="1" don_prob="0.939" acc_prob="0.994">
            <gDNA_intron_boundary i_start="94926" i_stop="95054" i_length="129"/>
          </intron>
          <exon e_serial="2" e_score="0.963">
            <gDNA_exon_boundary e_start="95055" e_stop="95847" e_length="793"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.990">
            <gDNA_intron_boundary i_start="95848" i_stop="95943" i_length="96"/>
          </intron>
          <exon e_serial="3" e_score="0.950">
            <gDNA_exon_boundary e_start="95944" e_stop="96185" e_length="242"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="96186" i_stop="96258" i_length="73"/>
          </intron>
          <exon e_serial="4" e_score="0.986">
            <gDNA_exon_boundary e_start="96259" e_stop="96739" e_length="481"/>
          </exon>
          <intron i_serial="4" don_prob="0.953" acc_prob="1.000">
            <gDNA_intron_boundary i_start="96740" i_stop="96820" i_length="81"/>
          </intron>
          <exon e_serial="5" e_score="0.975">
            <gDNA_exon_boundary e_start="96821" e_stop="97348" e_length="528"/>
          </exon>
          <intron i_serial="5" don_prob="0.982" acc_prob="0.999">
            <gDNA_intron_boundary i_start="97349" i_stop="97448" i_length="100"/>
          </intron>
          <exon e_serial="6" e_score="0.936">
            <gDNA_exon_boundary e_start="97449" e_stop="97636" e_length="188"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94871" stop="94925"/>
              <exon start="95055" stop="95650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95594" stop="95847"/>
              <exon start="95944" stop="95979"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95794" stop="95847"/>
              <exon start="95944" stop="96185"/>
              <exon start="96259" stop="96536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276969" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96438" stop="96739"/>
              <exon start="96821" stop="96964"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96839" stop="97348"/>
              <exon start="97449" stop="97636"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538686" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96840" stop="97348"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275102" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTCTTGTTATTCTTCAAATTTTCTAAAGTTTTTAAAAGCATTTTCTTTATAAG : ATATGCATCTGTCAAATTTATACGTACATCCTGGTCCAGTAGAGCATGATGTATTAAAAATTCAAGTTCATCATCGTTCCGAAGGAATTTGGAACGGTAGCATAAAAGAAGAGAGATGTTGCTTATATACGCGTCGTGGTGATATTGAATTTTGGCAACATTTAAAATATCATCCATTACATTCTCGCATCCTTCAATATTTTGAAAATTATAGATTTAAAGGAATTCTTGATGTTGGATGTGTGTCGTATGACTCCGGATTAATTTCTGCTTTAATTGGAAAGTGGCGTCGAAAACTCATACTTTTCACATGCGAACTGGCGAGGCTACCATAACTTTACAAGATATTGAAATTTTATTCGGAATGGTAGTAGATGGTAGACCTATAATTTTAAATGGAGCTGATTCTCTAGGGATTATAGGTAGATAAGAAATGATTTTTCAATTAACAGGATGGTTACCCGATACTAGTTGTTTTTCTGGTGTTAGTAGATTGTTAACATATAAATTGATTGAGTATATAGAATGTTTGGAAGTTATTAATGATAACTCAACTGAGCATGAAGTTCAACAAAAATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGGATCGGCCGCATTATCATATTTGTATAATTGTTTATGCCATGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGCAG : ATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCAAAAGCCTCTAAGAACCAATCAATTTGAGGCTTCAACTGTGCTTGCACGTAAATGGACGTGACGTAGACTTTATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTCACTGATGAACAGGTATTTAATATTATTAGTATCTTAAACTTTTCATATTTTATTTTATTTTAAATAAGAATATA : TTTTTTTCTGCCAATGTTGTTTTTATAATTATCTTACTTAATTATTTTTTTATAGTTTATTTGGCAGCCTTATTCGGAAGATGTTATTAATGGATTGCCTGAGTGGTGTCGGTCAGGACAACGTGTCTGGATGGCACAGGTGCCACTGATTTATGGAATTTATCGTGAGTGGCACATGGTTGATCGTGTTGTGAGACAGTTCGATTATTTACAACATATTCCTGGACCGTGTACCCAATTTTCCGAATATCATTTTAAGCGTGATAAACGATCTATAATAAAATAAGAAGATATAGATGCATTTAACTATACACAATATTTATGGGAACAACGTCAAAATCGTATATTTCGACCTCCATTTGTAAGTGATCAAACAGATTACTTTCGATGGTACATAAGGCATACCCGCATGGTCATTGGAAATCCACAACATGTTGTACAAAAAGGGTATCAACACATGGCAGGAAGACATGAGGCATTA : GCTAGGGGTCATGAAATGCAGTATCGTCGAGCTCGGATGATTGAAAATGATGAAAATCAATCTAATGAAATGAGACAATATGCAGCGGAAGTCGCTCGTATTTCAATGGAGTCAATGAATGCGGCCTTTCAGGAAACGCGATTGAGCTTTGATCCTGATTACAATCCTCCCACTCAATACGATGAACCACCACCAGTACAAGTATCTCGCCGATCACGACAAACAACACCGAGAGAGGGTGCTTGTCGAGGTAGAAGGACCACTGGTGAAACAACTGATTTTTCTGCAAGGCCCTCTAACACTAATGTGGCGACTCCAGAGCCTTATTATCCCACATTTGATTTTTCTGCAGGGCCCTCTAACACTAATCCGAATTTTTCTAGTCAGCAAACAGTTGGTTTTGTAACTCCGCAGGTTCCAATATCTGGGTTTGCACAATTTAGTGGTTCTCAATATGGTTTTCAACATGGTATGCGTGAATTTTCGATACATAATTCTCCATTTGGTGGAAGATGGAATTTTTCGAAT : GTAATTGCGTTTGATGATTCAAGATTGAATGCTGGGGCTTCACAAAATTTAGTTCTTAATAGACAAAATCCACCTCGGAGAACATCTAGGCTACACAAATCAACTAGATATGGAACAGGCAGTCACTATCAAAATGAGGAAGATTTTGAAAATGAAGATGAAAATGAAGATTCGGATTCAGAAGAATA</gDNA_template>
            <first_frame> N  S  C  Y  S  S  N  F  L  K  F  L  K  A  F  S  L  *   : D  M  H  L  S  N  L  Y  V  H  P  G  P  V  E  H  D  V  L  K  I  Q  V  H  H  R  S  E  G  I  W  N  G  S  I  K  E  E  R  C  C  L  Y  T  R  R  G  D  I  E  F  W  Q  H  L  K  Y  H  P  L  H  S  R  I  L  Q  Y  F  E  N  Y  R  F  K  G  I  L  D  V  G  C  V  S  Y  D  S  G  L  I  S  A  L  I  G  K  W  R  R  K  L  I  L  F  T  C  E  L  A  R  L  P  *  L  Y  K  I  L  K  F  Y  S  E  W  *  *  M  V  D  L  *  F  *  M  E  L  I  L  *  G  L  *  V  D  K  K  *  F  F  N  *  Q  D  G  Y  P  I  L  V  V  F  L  V  L  V  D  C  *  H  I  N  *  L  S  I  *  N  V  W  K  L  L  M  I  T  Q  L  S  M  K  F  N  K  N  L  D  Y  I  Y  Y  G  Y  V  V  D  Q  Y  F  R  I  N  L  I  I  R  L  I  W  T  F  *  L  T  *  E  I  *  I  *  C  Q  L  K  H  G  D  R  P  H  Y  H  I  C  I  I  V  Y  A  M  R  Q  *  K  N  Q  M  K  F  V  D  F  S  L  *  C  R :   F  G  H  G  K  E  L  F  P  C  N  H  C  K  S  L  *  E  P  I  N  L  R  L  Q  L  C  L  H  V  N  G  R  D  V  D  F  I  K  M  R  H  E  L  *  S  V  *  L  G  M  Y  L  I  I  S  L  M  N  R  Y  L  I  L  L  V  S  *  T  F  H  I  L  F  Y  F  K  *  E  Y   : I  F  F  C  Q  C  C  F  Y  N  Y  L  T  *  L  F  F  Y  S  L  F  G  S  L  I  R  K  M  L  L  M  D  C  L  S  G  V  G  Q  D  N  V  S  G  W  H  R  C  H  *  F  M  E  F  I  V  S  G  T  W  L  I  V  L  *  D  S  S  I  I  Y  N  I  F  L  D  R  V  P  N  F  P  N  I  I  L  S  V  I  N  D  L  *  *  N  K  K  I  *  M  H  L  T  I  H  N  I  Y  G  N  N  V  K  I  V  Y  F  D  L  H  L  *  V  I  K  Q  I  T  F  D  G  T  *  G  I  P  A  W  S  L  E  I  H  N  M  L  Y  K  K  G  I  N  T  W  Q  E  D  M  R  H  * :   L  G  V  M  K  C  S  I  V  E  L  G  *  L  K  M  M  K  I  N  L  M  K  *  D  N  M  Q  R  K  S  L  V  F  Q  W  S  Q  *  M  R  P  F  R  K  R  D  *  A  L  I  L  I  T  I  L  P  L  N  T  M  N  H  H  Q  Y  K  Y  L  A  D  H  D  K  Q  H  R  E  R  V  L  V  E  V  E  G  P  L  V  K  Q  L  I  F  L  Q  G  P  L  T  L  M  W  R  L  Q  S  L  I  I  P  H  L  I  F  L  Q  G  P  L  T  L  I  R  I  F  L  V  S  K  Q  L  V  L  *  L  R  R  F  Q  Y  L  G  L  H  N  L  V  V  L  N  M  V  F  N  M  V  C  V  N  F  R  Y  I  I  L  H  L  V  E  D  G  I  F  R  M :   *  L  R  L  M  I  Q  D  *  M  L  G  L  H  K  I  *  F  L  I  D  K  I  H  L  G  E  H  L  G  Y  T  N  Q  L  D  M  E  Q  A  V  T  I  K  M  R  K  I  L  K  M  K  M  K  M  K  I  R  I  Q  K  N  </first_frame>
            <second_frame>  I  L  V  I  L  Q  I  F  *  S  F  *  K  H  F  L  Y  K  :  I  C  I  C  Q  I  Y  T  Y  I  L  V  Q  *  S  M  M  Y  *  K  F  K  F  I  I  V  P  K  E  F  G  T  V  A  *  K  K  R  D  V  A  Y  I  R  V  V  V  I  L  N  F  G  N  I  *  N  I  I  H  Y  I  L  A  S  F  N  I  L  K  I  I  D  L  K  E  F  L  M  L  D  V  C  R  M  T  P  D  *  F  L  L  *  L  E  S  G  V  E  N  S  Y  F  S  H  A  N  W  R  G  Y  H  N  F  T  R  Y  *  N  F  I  R  N  G  S  R  W  *  T  Y  N  F  K  W  S  *  F  S  R  D  Y  R  *  I  R  N  D  F  S  I  N  R  M  V  T  R  Y  *  L  F  F  W  C  *  *  I  V  N  I  *  I  D  *  V  Y  R  M  F  G  S  Y  *  *  *  L  N  *  A  *  S  S  T  K  I  *  I  I  F  I  M  V  M  W  W  I  N  I  S  G  *  I  *  *  *  D  *  F  G  H  F  D  *  H  E  K  F  R  F  N  V  N  S  S  M  G  I  G  R  I  I  I  F  V  *  L  F  M  P  C  V  N  E  K  I  K  *  S  L  W  I  S  L  F  S  A   : D  L  G  M  G  K  N  Y  S  P  A  T  I  A  K  A  S  K  N  Q  S  I  *  G  F  N  C  A  C  T  *  M  D  V  T  *  T  L  S  K  *  G  T  N  C  N  R  C  D  *  G  C  T  *  *  S  H  *  *  T  G  I  *  Y  Y  *  Y  L  K  L  F  I  F  Y  F  I  L  N  K  N  I  :  F  F  S  A  N  V  V  F  I  I  I  L  L  N  Y  F  F  I  V  Y  L  A  A  L  F  G  R  C  Y  *  W  I  A  *  V  V  S  V  R  T  T  C  L  D  G  T  G  A  T  D  L  W  N  L  S  *  V  A  H  G  *  S  C  C  E  T  V  R  L  F  T  T  Y  S  W  T  V  Y  P  I  F  R  I  S  F  *  A  *  *  T  I  Y  N  K  I  R  R  Y  R  C  I  *  L  Y  T  I  F  M  G  T  T  S  K  S  Y  I  S  T  S  I  C  K  *  S  N  R  L  L  S  M  V  H  K  A  Y  P  H  G  H  W  K  S  T  T  C  C  T  K  R  V  S  T  H  G  R  K  T  *  G  I   : S  *  G  S  *  N  A  V  S  S  S  S  D  D  *  K  *  *  K  S  I  *  *  N  E  T  I  C  S  G  S  R  S  Y  F  N  G  V  N  E  C  G  L  S  G  N  A  I  E  L  *  S  *  L  Q  S  S  H  S  I  R  *  T  T  T  S  T  S  I  S  P  I  T  T  N  N  T  E  R  G  C  L  S  R  *  K  D  H  W  *  N  N  *  F  F  C  K  A  L  *  H  *  C  G  D  S  R  A  L  L  S  H  I  *  F  F  C  R  A  L  *  H  *  S  E  F  F  *  S  A  N  S  W  F  C  N  S  A  G  S  N  I  W  V  C  T  I  *  W  F  S  I  W  F  S  T  W  Y  A  *  I  F  D  T  *  F  S  I  W  W  K  M  E  F  F  E   : C  N  C  V  *  *  F  K  I  E  C  W  G  F  T  K  F  S  S  *  *  T  K  S  T  S  E  N  I  *  A  T  Q  I  N  *  I  W  N  R  Q  S  L  S  K  *  G  R  F  *  K  *  R  *  K  *  R  F  G  F  R  R  I </second_frame>
            <third_frame>   F  L  L  F  F  K  F  S  K  V  F  K  S  I  F  F  I  R :   Y  A  S  V  K  F  I  R  T  S  W  S  S  R  A  *  C  I  K  N  S  S  S  S  S  F  R  R  N  L  E  R  *  H  K  R  R  E  M  L  L  I  Y  A  S  W  *  Y  *  I  L  A  T  F  K  I  S  S  I  T  F  S  H  P  S  I  F  *  K  L  *  I  *  R  N  S  *  C  W  M  C  V  V  *  L  R  I  N  F  C  F  N  W  K  V  A  S  K  T  H  T  F  H  M  R  T  G  E  A  T  I  T  L  Q  D  I  E  I  L  F  G  M  V  V  D  G  R  P  I  I  L  N  G  A  D  S  L  G  I  I  G  R  *  E  M  I  F  Q  L  T  G  W  L  P  D  T  S  C  F  S  G  V  S  R  L  L  T  Y  K  L  I  E  Y  I  E  C  L  E  V  I  N  D  N  S  T  E  H  E  V  Q  Q  K  F  R  L  Y  L  L  W  L  C  G  G  S  I  F  P  D  K  S  N  N  K  I  N  L  D  I  L  I  D  M  R  N  L  D  L  M  S  T  Q  A  W  G  S  A  A  L  S  Y  L  Y  N  C  L  C  H  A  S  M  K  K  S  N  E  V  C  G  F  L  S  L  V  Q  :  I  W  A  W  E  R  I  I  P  L  Q  P  L  Q  K  P  L  R  T  N  Q  F  E  A  S  T  V  L  A  R  K  W  T  *  R  R  L  Y  Q  N  E  A  R  T  V  I  G  V  I  R  D  V  L  D  N  L  T  D  E  Q  V  F  N  I  I  S  I  L  N  F  S  Y  F  I  L  F  *  I  R  I  Y :   F  F  L  P  M  L  F  L  *  L  S  Y  L  I  I  F  L  *  F  I  W  Q  P  Y  S  E  D  V  I  N  G  L  P  E  W  C  R  S  G  Q  R  V  W  M  A  Q  V  P  L  I  Y  G  I  Y  R  E  W  H  M  V  D  R  V  V  R  Q  F  D  Y  L  Q  H  I  P  G  P  C  T  Q  F  S  E  Y  H  F  K  R  D  K  R  S  I  I  K  *  E  D  I  D  A  F  N  Y  T  Q  Y  L  W  E  Q  R  Q  N  R  I  F  R  P  P  F  V  S  D  Q  T  D  Y  F  R  W  Y  I  R  H  T  R  M  V  I  G  N  P  Q  H  V  V  Q  K  G  Y  Q  H  M  A  G  R  H  E  A  L  :  A  R  G  H  E  M  Q  Y  R  R  A  R  M  I  E  N  D  E  N  Q  S  N  E  M  R  Q  Y  A  A  E  V  A  R  I  S  M  E  S  M  N  A  A  F  Q  E  T  R  L  S  F  D  P  D  Y  N  P  P  T  Q  Y  D  E  P  P  P  V  Q  V  S  R  R  S  R  Q  T  T  P  R  E  G  A  C  R  G  R  R  T  T  G  E  T  T  D  F  S  A  R  P  S  N  T  N  V  A  T  P  E  P  Y  Y  P  T  F  D  F  S  A  G  P  S  N  T  N  P  N  F  S  S  Q  Q  T  V  G  F  V  T  P  Q  V  P  I  S  G  F  A  Q  F  S  G  S  Q  Y  G  F  Q  H  G  M  R  E  F  S  I  H  N  S  P  F  G  G  R  W  N  F  S  N  :  V  I  A  F  D  D  S  R  L  N  A  G  A  S  Q  N  L  V  L  N  R  Q  N  P  P  R  R  T  S  R  L  H  K  S  T  R  Y  G  T  G  S  H  Y  Q  N  E  E  D  F  E  N  E  D  E  N  E  D  S  D  S  E  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96545" stop="96739"/>
                    <exon start="96821" stop="97348"/>
                    <exon start="97449" stop="97634"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>909</number_coding_nucleotides>
                  <number_encoded_amino_acids>303</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EDIDAFNYTQYLWEQRQNRIFRPPFVSDQTDYFRWYIRHTRMVIGNPQHVVQKGYQHMAGRHEALARGHEMQYRRARMIENDENQSNEMRQYAAEVARISMESMNAAFQETRLSFDPDYNPPTQYDEPPPVQVSRRSRQTTPREGACRGRRTTGETTDFSARPSNTNVATPEPYYPTFDFSAGPSNTNPNFSSQQTVGFVTPQVPISGFAQFSGSQYGFQHGMREFSIHNSPFGGRWNFSNVIAFDDSRLNAGASQNLVLNRQNPPRRTSRLHKSTRYGTGSHYQNEEDFENEDENEDSDSEE</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="95485" stop="95847"/>
                    <exon start="95944" stop="96045"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>462</number_coding_nucleotides>
                  <number_encoded_amino_acids>154</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EMIFQLTGWLPDTSCFSGVSRLLTYKLIEYIECLEVINDNSTEHEVQQKFRLYLLWLCGGSIFPDKSNNKINLDILIDMRNLDLMSTQAWGSAALSYLYNCLCHASMKKSNEVCGFLSLVQIWAWERIIPLQPLQKPLRTNQFEASTVLARKWT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="2" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94925" stop="95389"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>333</number_coding_nucleotides>
                  <number_encoded_amino_acids>111</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DMHLSNLYVHPGPVEHDVLKIQVHHRSEGIWNGSIKEERCCLYTRRGDIEFWQHLKYHPLHSRILQYFENYRFKGILDVGCVSYDSGLISALIGKWRRKLILFTCELARLP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="2" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96314" stop="96544"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FIWQPYSEDVINGLPEWCRSGQRVWMAQVPLIYGIYREWHMVDRVVRQFDYLQHIPGPCTQFSEYHFKRDKRSIIK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="94871" e_stop="94925"/>
            <exon e_start="95055" e_stop="96191"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.939" acc_prob="0.994" e_score="0.982"/>
          <exon-only e_score="0.963"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="94871" e_stop="94925" e_length="55"/>
          </exon>
          <intron i_serial="1" don_prob="0.939" acc_prob="0.994">
            <gDNA_intron_boundary i_start="94926" i_stop="95054" i_length="129"/>
          </intron>
          <exon e_serial="2" e_score="0.963">
            <gDNA_exon_boundary e_start="95055" e_stop="96191" e_length="1137"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94871" stop="94925"/>
              <exon start="95055" stop="95650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273357" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95589" stop="96191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276340" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTCTTGTTATTCTTCAAATTTTCTAAAGTTTTTAAAAGCATTTTCTTTATAAG : ATATGCATCTGTCAAATTTATACGTACATCCTGGTCCAGTAGAGCATGATGTATTAAAAATTCAAGTTCATCATCGTTCCGAAGGAATTTGGAACGGTAGCATAAAAGAAGAGAGATGTTGCTTATATACGCGTCGTGGTGATATTGAATTTTGGCAACATTTAAAATATCATCCATTACATTCTCGCATCCTTCAATATTTTGAAAATTATAGATTTAAAGGAATTCTTGATGTTGGATGTGTGTCGTATGACTCCGGATTAATTTCTGCTTTAATTGGAAAGTGGCGTCGAAAACTCATACTTTTCACATGCGAACTGGCGAGGCTACCATAACTTTACAAGATATTGAAATTTTATTCGGAATGGTAGTAGATGGTAGACCTATAATTTTAAATGGAGCTGATTCTCTAGGGATTATAGGTAGATAAGAAATGATTTTTCAATTAACAGGATGGTTACCCGATACTAGTTGTTTTTCTGGTGTTAGTAGATTGTTAACATATAAATTGATTGAGTATATAGAATGTTTGGAAGTTATTAATGATAACTCAACTGAGCATGAAGTTCAACAAAAATTTAGATTATATTTATTATGGTTATGTGGTGGATCAATATTTCCGGATAAATCTAATAATAAGATTAATTTGGACATTTTGATTGACATGAGAAATTTAGATTTAATGTCAACTCAAGCATGGGGATCGGCCGCATTATCATATTTGTATAATTGTTTATGCCATGCGTCAATGAAAAAATCAAATGAAGTTTGTGGATTTCTCTCTTTAGTGCAGATATACATATTTTTAATTAAATATTTTTTATATACTAGTAATATGCACTTTTAAATTTAAGTGCATTATAAGTAATGGTGAATTTATTTATTGTAGATTTGGGCATGGGAAAGAATTATTCCCCTGCAACCATTGCAAAAGCCTCTAAGAACCAATCAATTTGAGGCTTCAACTGTGCTTGCACGTAAATGGACGTGACGTAGACTTTATCAAAATGAGGCACGAACTGTAATCGGTGTGATTAGGGATGTACTTGATAATCTCACTGATGAACAGGTATTTAATATTATTAGTATCTTAAACTTTTCATATTTTATTTTATTTTAAATAAGAATATATTTGGT</gDNA_template>
            <first_frame> N  S  C  Y  S  S  N  F  L  K  F  L  K  A  F  S  L  *   : D  M  H  L  S  N  L  Y  V  H  P  G  P  V  E  H  D  V  L  K  I  Q  V  H  H  R  S  E  G  I  W  N  G  S  I  K  E  E  R  C  C  L  Y  T  R  R  G  D  I  E  F  W  Q  H  L  K  Y  H  P  L  H  S  R  I  L  Q  Y  F  E  N  Y  R  F  K  G  I  L  D  V  G  C  V  S  Y  D  S  G  L  I  S  A  L  I  G  K  W  R  R  K  L  I  L  F  T  C  E  L  A  R  L  P  *  L  Y  K  I  L  K  F  Y  S  E  W  *  *  M  V  D  L  *  F  *  M  E  L  I  L  *  G  L  *  V  D  K  K  *  F  F  N  *  Q  D  G  Y  P  I  L  V  V  F  L  V  L  V  D  C  *  H  I  N  *  L  S  I  *  N  V  W  K  L  L  M  I  T  Q  L  S  M  K  F  N  K  N  L  D  Y  I  Y  Y  G  Y  V  V  D  Q  Y  F  R  I  N  L  I  I  R  L  I  W  T  F  *  L  T  *  E  I  *  I  *  C  Q  L  K  H  G  D  R  P  H  Y  H  I  C  I  I  V  Y  A  M  R  Q  *  K  N  Q  M  K  F  V  D  F  S  L  *  C  R  Y  T  Y  F  *  L  N  I  F  Y  I  L  V  I  C  T  F  K  F  K  C  I  I  S  N  G  E  F  I  Y  C  R  F  G  H  G  K  E  L  F  P  C  N  H  C  K  S  L  *  E  P  I  N  L  R  L  Q  L  C  L  H  V  N  G  R  D  V  D  F  I  K  M  R  H  E  L  *  S  V  *  L  G  M  Y  L  I  I  S  L  M  N  R  Y  L  I  L  L  V  S  *  T  F  H  I  L  F  Y  F  K  *  E  Y  I  W  </first_frame>
            <second_frame>  I  L  V  I  L  Q  I  F  *  S  F  *  K  H  F  L  Y  K  :  I  C  I  C  Q  I  Y  T  Y  I  L  V  Q  *  S  M  M  Y  *  K  F  K  F  I  I  V  P  K  E  F  G  T  V  A  *  K  K  R  D  V  A  Y  I  R  V  V  V  I  L  N  F  G  N  I  *  N  I  I  H  Y  I  L  A  S  F  N  I  L  K  I  I  D  L  K  E  F  L  M  L  D  V  C  R  M  T  P  D  *  F  L  L  *  L  E  S  G  V  E  N  S  Y  F  S  H  A  N  W  R  G  Y  H  N  F  T  R  Y  *  N  F  I  R  N  G  S  R  W  *  T  Y  N  F  K  W  S  *  F  S  R  D  Y  R  *  I  R  N  D  F  S  I  N  R  M  V  T  R  Y  *  L  F  F  W  C  *  *  I  V  N  I  *  I  D  *  V  Y  R  M  F  G  S  Y  *  *  *  L  N  *  A  *  S  S  T  K  I  *  I  I  F  I  M  V  M  W  W  I  N  I  S  G  *  I  *  *  *  D  *  F  G  H  F  D  *  H  E  K  F  R  F  N  V  N  S  S  M  G  I  G  R  I  I  I  F  V  *  L  F  M  P  C  V  N  E  K  I  K  *  S  L  W  I  S  L  F  S  A  D  I  H  I  F  N  *  I  F  F  I  Y  *  *  Y  A  L  L  N  L  S  A  L  *  V  M  V  N  L  F  I  V  D  L  G  M  G  K  N  Y  S  P  A  T  I  A  K  A  S  K  N  Q  S  I  *  G  F  N  C  A  C  T  *  M  D  V  T  *  T  L  S  K  *  G  T  N  C  N  R  C  D  *  G  C  T  *  *  S  H  *  *  T  G  I  *  Y  Y  *  Y  L  K  L  F  I  F  Y  F  I  L  N  K  N  I  F  G </second_frame>
            <third_frame>   F  L  L  F  F  K  F  S  K  V  F  K  S  I  F  F  I  R :   Y  A  S  V  K  F  I  R  T  S  W  S  S  R  A  *  C  I  K  N  S  S  S  S  S  F  R  R  N  L  E  R  *  H  K  R  R  E  M  L  L  I  Y  A  S  W  *  Y  *  I  L  A  T  F  K  I  S  S  I  T  F  S  H  P  S  I  F  *  K  L  *  I  *  R  N  S  *  C  W  M  C  V  V  *  L  R  I  N  F  C  F  N  W  K  V  A  S  K  T  H  T  F  H  M  R  T  G  E  A  T  I  T  L  Q  D  I  E  I  L  F  G  M  V  V  D  G  R  P  I  I  L  N  G  A  D  S  L  G  I  I  G  R  *  E  M  I  F  Q  L  T  G  W  L  P  D  T  S  C  F  S  G  V  S  R  L  L  T  Y  K  L  I  E  Y  I  E  C  L  E  V  I  N  D  N  S  T  E  H  E  V  Q  Q  K  F  R  L  Y  L  L  W  L  C  G  G  S  I  F  P  D  K  S  N  N  K  I  N  L  D  I  L  I  D  M  R  N  L  D  L  M  S  T  Q  A  W  G  S  A  A  L  S  Y  L  Y  N  C  L  C  H  A  S  M  K  K  S  N  E  V  C  G  F  L  S  L  V  Q  I  Y  I  F  L  I  K  Y  F  L  Y  T  S  N  M  H  F  *  I  *  V  H  Y  K  *  W  *  I  Y  L  L  *  I  W  A  W  E  R  I  I  P  L  Q  P  L  Q  K  P  L  R  T  N  Q  F  E  A  S  T  V  L  A  R  K  W  T  *  R  R  L  Y  Q  N  E  A  R  T  V  I  G  V  I  R  D  V  L  D  N  L  T  D  E  Q  V  F  N  I  I  S  I  L  N  F  S  Y  F  I  L  F  *  I  R  I  Y  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="95485" stop="95901"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>414</number_coding_nucleotides>
                  <number_encoded_amino_acids>138</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EMIFQLTGWLPDTSCFSGVSRLLTYKLIEYIECLEVINDNSTEHEVQQKFRLYLLWLCGGSIFPDKSNNKINLDILIDMRNLDLMSTQAWGSAALSYLYNCLCHASMKKSNEVCGFLSLVQIYIFLIKYFLYTSNMHF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="+"/>
                <serials PGL_serial="21" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94925" stop="95389"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>333</number_coding_nucleotides>
                  <number_encoded_amino_acids>111</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DMHLSNLYVHPGPVEHDVLKIQVHHRSEGIWNGSIKEERCCLYTRRGDIEFWQHLKYHPLHSRILQYFENYRFKGILDVGCVSYDSGLISALIGKWRRKLILFTCELARLP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="-" PGL_start="96693" PGL_stop="95961"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="96693" e_stop="96259"/>
            <exon e_start="96185" e_stop="95961"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.982"/>
          <exon-only e_score="0.947"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="96693" e_stop="96259" e_length="435"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="96258" i_stop="96186" i_length="73"/>
          </intron>
          <exon e_serial="2" e_score="0.947">
            <gDNA_exon_boundary e_start="96185" e_stop="95961" e_length="225"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96693" stop="96259"/>
              <exon start="96185" stop="96044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275375" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96668" stop="96259"/>
              <exon start="96185" stop="95962"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276989" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96355" stop="96259"/>
              <exon start="96185" stop="95961"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393845" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACATGTTGTGGATTTCCAATGACCATGCGGGTATGCCTTATGTACCATCGAAAGTAATCTGTTTGATCACTTACAAATGGAGGTCGAAATATACGATTTTGACGTTGTTCCCATAAATATTGTGTATAGTTAAATGCATCTATATCTTCTTATTTTATTATAGATCGTTTATCACGCTTAAAATGATATTCGGAAAATTGGGTACACGGTCCAGGAATATGTTGTAAATAATCGAACTGTCTCACAACACGATCAACCATGTGCCACTCACGATAAATTCCATAAATCAGTGGCACCTGTGCCATCCAGACACGTTGTCCTGACCGACACCACTCAGGCAATCCATTAATAACATCTTCCGAATAAGGCTGCCAAATAAACTATAAAAAAATAATTAAGTAAGATAATTATAAAAACAACATTGGCAGAAAAAAA : TATATTCTTATTTAAAATAAAATAAAATATGAAAAGTTTAAGATACTAATAATATTAAATACCTGTTCATCAGTGAGATTATCAAGTACATCCCTAATCACACCGATTACAGTTCGTGCCTCATTTTGATAAAGTCTACGTCACGTCCATTTACGTGCAAGCACAGTTGAAGCCTCAAATTGATTGGTTCTTAGAGGCTTTTGCAATGGTTGCAGGGGAATAATT</gDNA_template>
            <first_frame> T  C  C  G  F  P  M  T  M  R  V  C  L  M  Y  H  R  K  *  S  V  *  S  L  T  N  G  G  R  N  I  R  F  *  R  C  S  H  K  Y  C  V  *  L  N  A  S  I  S  S  Y  F  I  I  D  R  L  S  R  L  K  *  Y  S  E  N  W  V  H  G  P  G  I  C  C  K  *  S  N  C  L  T  T  R  S  T  M  C  H  S  R  *  I  P  *  I  S  G  T  C  A  I  Q  T  R  C  P  D  R  H  H  S  G  N  P  L  I  T  S  S  E  *  G  C  Q  I  N  Y  K  K  I  I  K  *  D  N  Y  K  N  N  I  G  R  K  K  :  Y  I  L  I  *  N  K  I  K  Y  E  K  F  K  I  L  I  I  L  N  T  C  S  S  V  R  L  S  S  T  S  L  I  T  P  I  T  V  R  A  S  F  *  *  S  L  R  H  V  H  L  R  A  S  T  V  E  A  S  N  *  L  V  L  R  G  F  C  N  G  C  R  G  I  I </first_frame>
            <second_frame>  H  V  V  D  F  Q  *  P  C  G  Y  A  L  C  T  I  E  S  N  L  F  D  H  L  Q  M  E  V  E  I  Y  D  F  D  V  V  P  I  N  I  V  Y  S  *  M  H  L  Y  L  L  I  L  L  *  I  V  Y  H  A  *  N  D  I  R  K  I  G  Y  T  V  Q  E  Y  V  V  N  N  R  T  V  S  Q  H  D  Q  P  C  A  T  H  D  K  F  H  K  S  V  A  P  V  P  S  R  H  V  V  L  T  D  T  T  Q  A  I  H  *  *  H  L  P  N  K  A  A  K  *  T  I  K  K  *  L  S  K  I  I  I  K  T  T  L  A  E  K  N :   I  F  L  F  K  I  K  *  N  M  K  S  L  R  Y  *  *  Y  *  I  P  V  H  Q  *  D  Y  Q  V  H  P  *  S  H  R  L  Q  F  V  P  H  F  D  K  V  Y  V  T  S  I  Y  V  Q  A  Q  L  K  P  Q  I  D  W  F  L  E  A  F  A  M  V  A  G  E  *   </second_frame>
            <third_frame>   M  L  W  I  S  N  D  H  A  G  M  P  Y  V  P  S  K  V  I  C  L  I  T  Y  K  W  R  S  K  Y  T  I  L  T  L  F  P  *  I  L  C  I  V  K  C  I  Y  I  F  L  F  Y  Y  R  S  F  I  T  L  K  M  I  F  G  K  L  G  T  R  S  R  N  M  L  *  I  I  E  L  S  H  N  T  I  N  H  V  P  L  T  I  N  S  I  N  Q  W  H  L  C  H  P  D  T  L  S  *  P  T  P  L  R  Q  S  I  N  N  I  F  R  I  R  L  P  N  K  L  *  K  N  N  *  V  R  *  L  *  K  Q  H  W  Q  K  K   : I  Y  S  Y  L  K  *  N  K  I  *  K  V  *  D  T  N  N  I  K  Y  L  F  I  S  E  I  I  K  Y  I  P  N  H  T  D  Y  S  S  C  L  I  L  I  K  S  T  S  R  P  F  T  C  K  H  S  *  S  L  K  L  I  G  S  *  R  L  L  Q  W  L  Q  G  N  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0280E02.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="-" PGL_start="114496" PGL_stop="104030"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="114496" e_stop="114349"/>
            <exon e_start="113616" e_stop="113521"/>
            <exon e_start="113431" e_stop="113313"/>
            <exon e_start="113154" e_stop="112761"/>
            <exon e_start="111239" e_stop="111209"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.659" e_score="0.851"/>
          <exon-intron don_prob="0.628" acc_prob="0.864" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.967"/>
          <exon-only e_score="0.677"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.851">
            <gDNA_exon_boundary e_start="114496" e_stop="114349" e_length="148"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.659">
            <gDNA_intron_boundary i_start="114348" i_stop="113617" i_length="732"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="113616" e_stop="113521" e_length="96"/>
          </exon>
          <intron i_serial="2" don_prob="0.628" acc_prob="0.864">
            <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="113431" e_stop="113313" e_length="119"/>
          </exon>
          <intron i_serial="3" don_prob="0.977" acc_prob="0.965">
            <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158"/>
          </intron>
          <exon e_serial="4" e_score="0.967">
            <gDNA_exon_boundary e_start="113154" e_stop="112761" e_length="394"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="112760" i_stop="111240" i_length="1521"/>
          </intron>
          <exon e_serial="5" e_score="0.677">
            <gDNA_exon_boundary e_start="111239" e_stop="111209" e_length="31"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114496" stop="114349"/>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="113052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114438" stop="114349"/>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E696885" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114431" stop="114349"/>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E693045" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114404" stop="114349"/>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112761"/>
              <exon start="111239" stop="111209"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377060" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114371" stop="114349"/>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112876"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E283335" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365496" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313424" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113608" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342350" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113586" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113553" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365668" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113539" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113539" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222968" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113538" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113530" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112876"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E221687" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113413" stop="113313"/>
              <exon start="113154" stop="112878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350353" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113405" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113399" stop="113313"/>
              <exon start="113154" stop="112876"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E221762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113393" stop="113313"/>
              <exon start="113154" stop="112881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223484" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113327" stop="113313"/>
              <exon start="113154" stop="112947"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280925" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTATTTTATAGAAGTCTGATGCAATTTTCCCAACTGCCAGAATGCTGCATATCTTATCATCCGAGGCATGAAGACGCTGCATCTTCGTGTACAGCAACAAAATTCTACTGCATTGAGGATGGCCGAAATTTTAGAGGCTCATCCCAAG : GTGAAACACGTCTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAG : GTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTG : GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTTCTTAATCTCTCAATTTCTTCAAGGATGAATATTCCTCTCATGTCGTTTAAAGAATGCATTTTTTTTAAAAAAAAATGGAAGGGGAGAAAATCAATTTGTGTTTA : TAAAAATATGATTTAAAGAAAAAACAAATTA</gDNA_template>
            <first_frame> V  F  Y  R  S  L  M  Q  F  S  Q  L  P  E  C  C  I  S  Y  H  P  R  H  E  D  A  A  S  S  C  T  A  T  K  F  Y  C  I  E  D  G  R  N  F  R  G  S  S  Q   : G  E  T  R  L  L  S  R  L  A  E  S  S  G  I  S  P  C  K  E  T  N  D  W  L  W  W  C  G  Q  F  *   : G  *  W  R  P  P  N  Y  C  K  I  C  G  C  S  E  D  S  L  Y  C  S  I  V  W  R  L  *  E  H  C  G  P  T  S  N  N  V  L  L  :  G  S  *  P  V  *  *  S  K  V  W  H  L  G  *  L  G  P  I  *  L  W  S  G  R  F  *  R  C  E  S  *  C  S  S  G  F  G  F  H  L  G  C  C  F  T  C  N  D  F  F  P  F  P  F  H  P  D  F  V  V  R  T  C  V  I  A  D  F  H  L  V  S  N  C  L  N  L  I  K  G  S  S  S  R  *  F  S  P  L  N  Y  F  M  S  C  F  L  I  S  Q  F  L  Q  G  *  I  F  L  S  C  R  L  K  N  A  F  F  L  K  K  N  G  R  G  E  N  Q  F  V  F   : I  K  I  *  F  K  E  K  T  N   </first_frame>
            <second_frame>  Y  F  I  E  V  *  C  N  F  P  N  C  Q  N  A  A  Y  L  I  I  R  G  M  K  T  L  H  L  R  V  Q  Q  Q  N  S  T  A  L  R  M  A  E  I  L  E  A  H  P  K  :  V  K  H  V  Y  Y  P  G  L  P  S  H  P  E  Y  H  L  A  K  K  Q  M  T  G  F  G  G  V  V  S  F  E  :  V  D  G  D  L  L  T  T  A  K  F  V  D  A  L  R  I  P  Y  I  A  P  S  F  G  G  C  E  S  I  V  D  Q  P  A  I  M  S  Y  W :   D  L  S  Q  S  D  R  A  K  Y  G  I  L  D  N  L  V  R  F  S  F  G  V  E  D  F  E  D  V  K  A  D  V  L  Q  A  L  D  S  I  *  A  A  V  S  P  A  T  I  F  F  L  F  L  F  I  L  I  S  L  F  V  L  V  L  L  L  T  S  I  S  Y  P  I  V  *  T  *  L  K  D  R  L  V  D  D  S  V  H  *  I  I  S  C  R  V  S  *  S  L  N  F  F  K  D  E  Y  S  S  H  V  V  *  R  M  H  F  F  *  K  K  M  E  G  E  K  I  N  L  C  L  :  *  K  Y  D  L  K  K  K  Q  I  </second_frame>
            <third_frame>   I  L  *  K  S  D  A  I  F  P  T  A  R  M  L  H  I  L  S  S  E  A  *  R  R  C  I  F  V  Y  S  N  K  I  L  L  H  *  G  W  P  K  F  *  R  L  I  P  R :   *  N  T  S  I  I  Q  A  C  R  V  I  R  N  I  T  L  Q  R  N  K  *  L  A  L  V  V  W  S  V  L  R :   L  M  E  T  S  *  L  L  Q  N  L  W  M  L  *  G  F  L  I  L  L  H  R  L  E  V  V  R  A  L  W  T  N  Q  Q  *  C  L  I   : G  I  L  A  S  L  I  E  Q  S  M  A  S  W  I  T  W  S  D  L  A  L  E  W  K  I  L  K  M  *  K  L  M  F  F  R  L  W  I  P  F  R  L  L  F  H  L  Q  R  F  F  S  F  S  F  S  S  *  F  R  C  S  Y  L  C  Y  C  *  L  P  S  R  I  Q  L  F  E  P  N  *  R  I  V  *  *  M  I  Q  S  I  K  L  F  H  V  V  F  L  N  L  S  I  S  S  R  M  N  I  P  L  M  S  F  K  E  C  I  F  F  K  K  K  W  K  G  R  K  S  I  C  V  Y :   K  N  M  I  *  R  K  N  K  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114477" stop="114349"/>
                    <exon start="113616" stop="113521"/>
                    <exon start="113431" stop="113313"/>
                    <exon start="113154" stop="113031"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>465</number_coding_nucleotides>
                  <number_encoded_amino_acids>155</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CNFPNCQNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKHVYYPGLPSHPEYHLAKKQMTGFGGVVSFEVDGDLLTTAKFVDALRIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGILDNLVRFSFGVEDFEDVKADVLQALDSI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="114496" e_stop="114349"/>
            <exon e_start="113616" e_stop="113521"/>
            <exon e_start="113431" e_stop="113313"/>
            <exon e_start="113154" e_stop="112860"/>
            <exon e_start="110546" e_stop="110528"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.659" e_score="0.851"/>
          <exon-intron don_prob="0.628" acc_prob="0.864" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.842"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.851">
            <gDNA_exon_boundary e_start="114496" e_stop="114349" e_length="148"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.659">
            <gDNA_intron_boundary i_start="114348" i_stop="113617" i_length="732"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="113616" e_stop="113521" e_length="96"/>
          </exon>
          <intron i_serial="2" don_prob="0.628" acc_prob="0.864">
            <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="113431" e_stop="113313" e_length="119"/>
          </exon>
          <intron i_serial="3" don_prob="0.977" acc_prob="0.965">
            <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="113154" e_stop="112860" e_length="295"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="112859" i_stop="110547" i_length="2313"/>
          </intron>
          <exon e_serial="5" e_score="0.842">
            <gDNA_exon_boundary e_start="110546" e_stop="110528" e_length="19"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114496" stop="114349"/>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="113052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114438" stop="114349"/>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E696885" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114431" stop="114349"/>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E693045" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114371" stop="114349"/>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112876"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E283335" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365496" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313424" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113599" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112860"/>
              <exon start="110546" stop="110528"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222188" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113586" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113553" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365668" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113539" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113539" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222968" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113538" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113530" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112876"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E221687" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113413" stop="113313"/>
              <exon start="113154" stop="112878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350353" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113405" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113399" stop="113313"/>
              <exon start="113154" stop="112876"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E221762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113393" stop="113313"/>
              <exon start="113154" stop="112881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223484" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113327" stop="113313"/>
              <exon start="113154" stop="112947"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280925" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTATTTTATAGAAGTCTGATGCAATTTTCCCAACTGCCAGAATGCTGCATATCTTATCATCCGAGGCATGAAGACGCTGCATCTTCGTGTACAGCAACAAAATTCTACTGCATTGAGGATGGCCGAAATTTTAGAGGCTCATCCCAAG : GTGAAACACGTCTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAG : GTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTG : GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTTCTTAA : AAAAAAATAAAATAAAAAT</gDNA_template>
            <first_frame> V  F  Y  R  S  L  M  Q  F  S  Q  L  P  E  C  C  I  S  Y  H  P  R  H  E  D  A  A  S  S  C  T  A  T  K  F  Y  C  I  E  D  G  R  N  F  R  G  S  S  Q   : G  E  T  R  L  L  S  R  L  A  E  S  S  G  I  S  P  C  K  E  T  N  D  W  L  W  W  C  G  Q  F  *   : G  *  W  R  P  P  N  Y  C  K  I  C  G  C  S  E  D  S  L  Y  C  S  I  V  W  R  L  *  E  H  C  G  P  T  S  N  N  V  L  L  :  G  S  *  P  V  *  *  S  K  V  W  H  L  G  *  L  G  P  I  *  L  W  S  G  R  F  *  R  C  E  S  *  C  S  S  G  F  G  F  H  L  G  C  C  F  T  C  N  D  F  F  P  F  P  F  H  P  D  F  V  V  R  T  C  V  I  A  D  F  H  L  V  S  N  C  L  N  L  I  K  G  S  S  S  R  *  F  S  P  L  N  Y  F  M  S  C  F  L   : K  K  N  K  I  K   </first_frame>
            <second_frame>  Y  F  I  E  V  *  C  N  F  P  N  C  Q  N  A  A  Y  L  I  I  R  G  M  K  T  L  H  L  R  V  Q  Q  Q  N  S  T  A  L  R  M  A  E  I  L  E  A  H  P  K  :  V  K  H  V  Y  Y  P  G  L  P  S  H  P  E  Y  H  L  A  K  K  Q  M  T  G  F  G  G  V  V  S  F  E  :  V  D  G  D  L  L  T  T  A  K  F  V  D  A  L  R  I  P  Y  I  A  P  S  F  G  G  C  E  S  I  V  D  Q  P  A  I  M  S  Y  W :   D  L  S  Q  S  D  R  A  K  Y  G  I  L  D  N  L  V  R  F  S  F  G  V  E  D  F  E  D  V  K  A  D  V  L  Q  A  L  D  S  I  *  A  A  V  S  P  A  T  I  F  F  L  F  L  F  I  L  I  S  L  F  V  L  V  L  L  L  T  S  I  S  Y  P  I  V  *  T  *  L  K  D  R  L  V  D  D  S  V  H  *  I  I  S  C  R  V  S  *  :  K  K  I  K  *  K  </second_frame>
            <third_frame>   I  L  *  K  S  D  A  I  F  P  T  A  R  M  L  H  I  L  S  S  E  A  *  R  R  C  I  F  V  Y  S  N  K  I  L  L  H  *  G  W  P  K  F  *  R  L  I  P  R :   *  N  T  S  I  I  Q  A  C  R  V  I  R  N  I  T  L  Q  R  N  K  *  L  A  L  V  V  W  S  V  L  R :   L  M  E  T  S  *  L  L  Q  N  L  W  M  L  *  G  F  L  I  L  L  H  R  L  E  V  V  R  A  L  W  T  N  Q  Q  *  C  L  I   : G  I  L  A  S  L  I  E  Q  S  M  A  S  W  I  T  W  S  D  L  A  L  E  W  K  I  L  K  M  *  K  L  M  F  F  R  L  W  I  P  F  R  L  L  F  H  L  Q  R  F  F  S  F  S  F  S  S  *  F  R  C  S  Y  L  C  Y  C  *  L  P  S  R  I  Q  L  F  E  P  N  *  R  I  V  *  *  M  I  Q  S  I  K  L  F  H  V  V  F  L  K :   K  K  *  N  K  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="23" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114477" stop="114349"/>
                    <exon start="113616" stop="113521"/>
                    <exon start="113431" stop="113313"/>
                    <exon start="113154" stop="113031"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>465</number_coding_nucleotides>
                  <number_encoded_amino_acids>155</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CNFPNCQNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKHVYYPGLPSHPEYHLAKKQMTGFGGVVSFEVDGDLLTTAKFVDALRIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGILDNLVRFSFGVEDFEDVKADVLQALDSI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="114496" e_stop="114349"/>
            <exon e_start="113616" e_stop="113521"/>
            <exon e_start="113431" e_stop="113313"/>
            <exon e_start="113154" e_stop="112861"/>
            <exon e_start="111312" e_stop="111272"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.659" e_score="0.851"/>
          <exon-intron don_prob="0.628" acc_prob="0.864" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.965" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.610"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.851">
            <gDNA_exon_boundary e_start="114496" e_stop="114349" e_length="148"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.659">
            <gDNA_intron_boundary i_start="114348" i_stop="113617" i_length="732"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="113616" e_stop="113521" e_length="96"/>
          </exon>
          <intron i_serial="2" don_prob="0.628" acc_prob="0.864">
            <gDNA_intron_boundary i_start="113520" i_stop="113432" i_length="89"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="113431" e_stop="113313" e_length="119"/>
          </exon>
          <intron i_serial="3" don_prob="0.977" acc_prob="0.965">
            <gDNA_intron_boundary i_start="113312" i_stop="113155" i_length="158"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="113154" e_stop="112861" e_length="294"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="112860" i_stop="111313" i_length="1548"/>
          </intron>
          <exon e_serial="5" e_score="0.610">
            <gDNA_exon_boundary e_start="111312" e_stop="111272" e_length="41"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114496" stop="114349"/>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112861"/>
              <exon start="111312" stop="111272"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390360" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114496" stop="114349"/>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="113052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114438" stop="114349"/>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E696885" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114431" stop="114349"/>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E693045" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114371" stop="114349"/>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112876"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E283335" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365496" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113616" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313424" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113586" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113553" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365668" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113539" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113539" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222968" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113538" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232486" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113530" stop="113521"/>
              <exon start="113431" stop="113313"/>
              <exon start="113154" stop="112876"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E221687" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113413" stop="113313"/>
              <exon start="113154" stop="112878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350353" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113405" stop="113313"/>
              <exon start="113154" stop="112861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113399" stop="113313"/>
              <exon start="113154" stop="112876"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E221762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113393" stop="113313"/>
              <exon start="113154" stop="112881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E223484" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="113327" stop="113313"/>
              <exon start="113154" stop="112947"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280925" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTATTTTATAGAAGTCTGATGCAATTTTCCCAACTGCCAGAATGCTGCATATCTTATCATCCGAGGCATGAAGACGCTGCATCTTCGTGTACAGCAACAAAATTCTACTGCATTGAGGATGGCCGAAATTTTAGAGGCTCATCCCAAG : GTGAAACACGTCTATTATCCAGGCTTGCCGAGTCATCCGGAATATCACCTTGCAAAGAAACAAATGACTGGCTTTGGTGGTGTGGTCAGTTTTGAG : GTTGATGGAGACCTCCTAACTACTGCAAAATTTGTGGATGCTCTGAGGATTCCTTATATTGCTCCATCGTTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTATTG : GGATCTTAGCCAGTCTGATAGAGCAAAGTATGGCATCTTGGATAACTTGGTCCGATTTAGCTTTGGAGTGGAAGATTTTGAAGATGTGAAAGCTGATGTTCTTCAGGCTTTGGATTCCATTTAGGCTGCTGTTTCACCTGCAACGATTTTTTTCCTTTTCCTTTTCATCCTGATTTCGTTGTTCGTACTTGTGTTATTGCTGACTTCCATCTCGTATCCAATTGTTTGAACCTAATTAAAGGATCGTCTAGTAGATGATTCAGTCCATTAAATTATTTCATGTCGTGTTTCTTA : ATAAGTATCAATAATCAATAATGAAGAAAAAAACATTACAA</gDNA_template>
            <first_frame> V  F  Y  R  S  L  M  Q  F  S  Q  L  P  E  C  C  I  S  Y  H  P  R  H  E  D  A  A  S  S  C  T  A  T  K  F  Y  C  I  E  D  G  R  N  F  R  G  S  S  Q   : G  E  T  R  L  L  S  R  L  A  E  S  S  G  I  S  P  C  K  E  T  N  D  W  L  W  W  C  G  Q  F  *   : G  *  W  R  P  P  N  Y  C  K  I  C  G  C  S  E  D  S  L  Y  C  S  I  V  W  R  L  *  E  H  C  G  P  T  S  N  N  V  L  L  :  G  S  *  P  V  *  *  S  K  V  W  H  L  G  *  L  G  P  I  *  L  W  S  G  R  F  *  R  C  E  S  *  C  S  S  G  F  G  F  H  L  G  C  C  F  T  C  N  D  F  F  P  F  P  F  H  P  D  F  V  V  R  T  C  V  I  A  D  F  H  L  V  S  N  C  L  N  L  I  K  G  S  S  S  R  *  F  S  P  L  N  Y  F  M  S  C  F  L  :  I  S  I  N  N  Q  *  *  R  K  K  H  Y   </first_frame>
            <second_frame>  Y  F  I  E  V  *  C  N  F  P  N  C  Q  N  A  A  Y  L  I  I  R  G  M  K  T  L  H  L  R  V  Q  Q  Q  N  S  T  A  L  R  M  A  E  I  L  E  A  H  P  K  :  V  K  H  V  Y  Y  P  G  L  P  S  H  P  E  Y  H  L  A  K  K  Q  M  T  G  F  G  G  V  V  S  F  E  :  V  D  G  D  L  L  T  T  A  K  F  V  D  A  L  R  I  P  Y  I  A  P  S  F  G  G  C  E  S  I  V  D  Q  P  A  I  M  S  Y  W :   D  L  S  Q  S  D  R  A  K  Y  G  I  L  D  N  L  V  R  F  S  F  G  V  E  D  F  E  D  V  K  A  D  V  L  Q  A  L  D  S  I  *  A  A  V  S  P  A  T  I  F  F  L  F  L  F  I  L  I  S  L  F  V  L  V  L  L  L  T  S  I  S  Y  P  I  V  *  T  *  L  K  D  R  L  V  D  D  S  V  H  *  I  I  S  C  R  V  S  * :   *  V  S  I  I  N  N  E  E  K  N  I  T  </second_frame>
            <third_frame>   I  L  *  K  S  D  A  I  F  P  T  A  R  M  L  H  I  L  S  S  E  A  *  R  R  C  I  F  V  Y  S  N  K  I  L  L  H  *  G  W  P  K  F  *  R  L  I  P  R :   *  N  T  S  I  I  Q  A  C  R  V  I  R  N  I  T  L  Q  R  N  K  *  L  A  L  V  V  W  S  V  L  R :   L  M  E  T  S  *  L  L  Q  N  L  W  M  L  *  G  F  L  I  L  L  H  R  L  E  V  V  R  A  L  W  T  N  Q  Q  *  C  L  I   : G  I  L  A  S  L  I  E  Q  S  M  A  S  W  I  T  W  S  D  L  A  L  E  W  K  I  L  K  M  *  K  L  M  F  F  R  L  W  I  P  F  R  L  L  F  H  L  Q  R  F  F  S  F  S  F  S  S  *  F  R  C  S  Y  L  C  Y  C  *  L  P  S  R  I  Q  L  F  E  P  N  *  R  I  V  *  *  M  I  Q  S  I  K  L  F  H  V  V  F  L   : N  K  Y  Q  *  S  I  M  K  K  K  T  L  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="23" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114477" stop="114349"/>
                    <exon start="113616" stop="113521"/>
                    <exon start="113431" stop="113313"/>
                    <exon start="113154" stop="113031"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>465</number_coding_nucleotides>
                  <number_encoded_amino_acids>155</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CNFPNCQNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKHVYYPGLPSHPEYHLAKKQMTGFGGVVSFEVDGDLLTTAKFVDALRIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGILDNLVRFSFGVEDFEDVKADVLQALDSI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="111048" e_stop="110575"/>
            <exon e_start="106782" e_stop="106617"/>
            <exon e_start="104652" e_stop="104030"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="0.992"/>
          <exon-intron don_prob="0.019" acc_prob="0.952" e_score="0.982"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="111048" e_stop="110575" e_length="474"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="110574" i_stop="106783" i_length="3792"/>
          </intron>
          <exon e_serial="2" e_score="0.982">
            <gDNA_exon_boundary e_start="106782" e_stop="106617" e_length="166"/>
          </exon>
          <intron i_serial="2" don_prob="0.019" acc_prob="0.952">
            <gDNA_intron_boundary i_start="106616" i_stop="104653" i_length="1964"/>
          </intron>
          <exon e_serial="3" e_score="0.992">
            <gDNA_exon_boundary e_start="104652" e_stop="104030" e_length="623"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111048" stop="110575"/>
              <exon start="106782" stop="106620"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111032" stop="110575"/>
              <exon start="106782" stop="106617"/>
              <exon start="104652" stop="104463"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730153" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111018" stop="110575"/>
              <exon start="106782" stop="106617"/>
              <exon start="104652" stop="104545"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729890" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111017" stop="110575"/>
              <exon start="106782" stop="106689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269388" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111016" stop="110575"/>
              <exon start="106782" stop="106617"/>
              <exon start="104652" stop="104501"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729697" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111013" stop="110575"/>
              <exon start="106782" stop="106617"/>
              <exon start="104652" stop="104417"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737352" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110885" stop="110575"/>
              <exon start="106782" stop="106617"/>
              <exon start="104652" stop="104334"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E731062" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106701" stop="106617"/>
              <exon start="104652" stop="104037"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538437" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106640" stop="106617"/>
              <exon start="104652" stop="104030"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302503" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTAATTTGAGTTCCTTTGGTTGGTGGGTGAGGGAATTGCATATCCTAAACTCAAAATTGCTAATTCTTTGTGAGAATCTAACATTTTTGTAAAATTTTGAACTATATGTTATTGGATTTCAAGAACTCCAAAAAAAAGCAAAATTCTGTTTAAAAATCAGTGTGTTTAGACGAATTTGTATAAAATCAAGCGATTGCCGGTGATATGAAATTCGGGAAAGAATTCAGCATCCATTTGGAAGAAACCCTACCTGAATGGAGGGATAAATACTTGTGTTACAAGCCGTTGAAGAAGCTTATCAAGCACATCCCTTCTTCCACCGCCGATAATACACCTCCGTTACCGCCGCTGCCGCCGGCGACGGCAGCCGCGACGGAGCTACAGGATTGGTTTATCAGAATTCTCAATGAGGAACTCGACAAGTTCAACGATTTCTACGTGGATAAAGAAGAAGACTTCATTATCCGTTTCCAG : GAACTGAAGGAAAGAATTGAACGTGTGAAGGAGAAGAGCGACAAAGATGGAGTTCTTGCAACAAACAATGAATTCAGTGAAGAAATGATGAACATCCGTAAAGACTTTGTTTCCATACACGGGGAGATGGTTCTTATTAAAAATTATAGCTCATTAAATTTGGCAG : GACTTGTTAAGATATTGAAGAAGTATGACAAACGAACTGGGGGATTGTTGCGTCTTCCTTTTACACAAGTCGCACTTCATCAGCCGATCTTTACTACGGAACCTCTGACGAGATTAGTCCATGAGTGTGAGGCTAATCTTGAGGTCCTATTTCCTTTGGAAGCAGAAGTTGTTGAATCAGCTGTCCCTGCAGATGAACAGATTGGAGCAACTACTTCTTATGCTTCCAATGTTCTCCCTGATACAACATTTCCACAGGGGGAAGAAAATGGGGATATATACCGAAGCACGCTAGCTGCAATAAGAGCCATTCAGGGACTAAAGAAAGCAAGCTCAACACATAACCCGCTGTCATTTTCATCTAATTCTGGGAACCAAGATAATGATAGCCCAGGTGCTGTAACAGCAGAAGACTCCGATTCTGACTCATTGGTTGCCTCTCAGAATGGTGAAGAGATGAATCGTGAAGTTTCCAGTTCACCAAAATAGAGTTGACTGATCTTGTTTTGTTTTGTTCATTATGTAGTGTAGTGCTAAAACTGTGCACTTTCTGTGTTGTGTGCTATAGGTCTGAATAACTGCTTACCCAATCAATAATATAAAGAAATTAACTTTAAATATTGT</gDNA_template>
            <first_frame> L  I  *  V  P  L  V  G  G  *  G  N  C  I  S  *  T  Q  N  C  *  F  F  V  R  I  *  H  F  C  K  I  L  N  Y  M  L  L  D  F  K  N  S  K  K  K  Q  N  S  V  *  K  S  V  C  L  D  E  F  V  *  N  Q  A  I  A  G  D  M  K  F  G  K  E  F  S  I  H  L  E  E  T  L  P  E  W  R  D  K  Y  L  C  Y  K  P  L  K  K  L  I  K  H  I  P  S  S  T  A  D  N  T  P  P  L  P  P  L  P  P  A  T  A  A  A  T  E  L  Q  D  W  F  I  R  I  L  N  E  E  L  D  K  F  N  D  F  Y  V  D  K  E  E  D  F  I  I  R  F  Q  :  E  L  K  E  R  I  E  R  V  K  E  K  S  D  K  D  G  V  L  A  T  N  N  E  F  S  E  E  M  M  N  I  R  K  D  F  V  S  I  H  G  E  M  V  L  I  K  N  Y  S  S  L  N  L  A   : G  L  V  K  I  L  K  K  Y  D  K  R  T  G  G  L  L  R  L  P  F  T  Q  V  A  L  H  Q  P  I  F  T  T  E  P  L  T  R  L  V  H  E  C  E  A  N  L  E  V  L  F  P  L  E  A  E  V  V  E  S  A  V  P  A  D  E  Q  I  G  A  T  T  S  Y  A  S  N  V  L  P  D  T  T  F  P  Q  G  E  E  N  G  D  I  Y  R  S  T  L  A  A  I  R  A  I  Q  G  L  K  K  A  S  S  T  H  N  P  L  S  F  S  S  N  S  G  N  Q  D  N  D  S  P  G  A  V  T  A  E  D  S  D  S  D  S  L  V  A  S  Q  N  G  E  E  M  N  R  E  V  S  S  S  P  K  *  S  *  L  I  L  F  C  F  V  H  Y  V  V  *  C  *  N  C  A  L  S  V  L  C  A  I  G  L  N  N  C  L  P  N  Q  *  Y  K  E  I  N  F  K  Y  C </first_frame>
            <second_frame>  *  F  E  F  L  W  L  V  G  E  G  I  A  Y  P  K  L  K  I  A  N  S  L  *  E  S  N  I  F  V  K  F  *  T  I  C  Y  W  I  S  R  T  P  K  K  S  K  I  L  F  K  N  Q  C  V  *  T  N  L  Y  K  I  K  R  L  P  V  I  *  N  S  G  K  N  S  A  S  I  W  K  K  P  Y  L  N  G  G  I  N  T  C  V  T  S  R  *  R  S  L  S  S  T  S  L  L  P  P  P  I  I  H  L  R  Y  R  R  C  R  R  R  R  Q  P  R  R  S  Y  R  I  G  L  S  E  F  S  M  R  N  S  T  S  S  T  I  S  T  W  I  K  K  K  T  S  L  S  V  S  R :   N  *  R  K  E  L  N  V  *  R  R  R  A  T  K  M  E  F  L  Q  Q  T  M  N  S  V  K  K  *  *  T  S  V  K  T  L  F  P  Y  T  G  R  W  F  L  L  K  I  I  A  H  *  I  W  Q  :  D  L  L  R  Y  *  R  S  M  T  N  E  L  G  D  C  C  V  F  L  L  H  K  S  H  F  I  S  R  S  L  L  R  N  L  *  R  D  *  S  M  S  V  R  L  I  L  R  S  Y  F  L  W  K  Q  K  L  L  N  Q  L  S  L  Q  M  N  R  L  E  Q  L  L  L  M  L  P  M  F  S  L  I  Q  H  F  H  R  G  K  K  M  G  I  Y  T  E  A  R  *  L  Q  *  E  P  F  R  D  *  R  K  Q  A  Q  H  I  T  R  C  H  F  H  L  I  L  G  T  K  I  M  I  A  Q  V  L  *  Q  Q  K  T  P  I  L  T  H  W  L  P  L  R  M  V  K  R  *  I  V  K  F  P  V  H  Q  N  R  V  D  *  S  C  F  V  L  F  I  M  *  C  S  A  K  T  V  H  F  L  C  C  V  L  *  V  *  I  T  A  Y  P  I  N  N  I  K  K  L  T  L  N  I   </second_frame>
            <third_frame>   N  L  S  S  F  G  W  W  V  R  E  L  H  I  L  N  S  K  L  L  I  L  C  E  N  L  T  F  L  *  N  F  E  L  Y  V  I  G  F  Q  E  L  Q  K  K  A  K  F  C  L  K  I  S  V  F  R  R  I  C  I  K  S  S  D  C  R  *  Y  E  I  R  E  R  I  Q  H  P  F  G  R  N  P  T  *  M  E  G  *  I  L  V  L  Q  A  V  E  E  A  Y  Q  A  H  P  F  F  H  R  R  *  Y  T  S  V  T  A  A  A  A  G  D  G  S  R  D  G  A  T  G  L  V  Y  Q  N  S  Q  *  G  T  R  Q  V  Q  R  F  L  R  G  *  R  R  R  L  H  Y  P  F  P   : G  T  E  G  K  N  *  T  C  E  G  E  E  R  Q  R  W  S  S  C  N  K  Q  *  I  Q  *  R  N  D  E  H  P  *  R  L  C  F  H  T  R  G  D  G  S  Y  *  K  L  *  L  I  K  F  G  R :   T  C  *  D  I  E  E  V  *  Q  T  N  W  G  I  V  A  S  S  F  Y  T  S  R  T  S  S  A  D  L  Y  Y  G  T  S  D  E  I  S  P  *  V  *  G  *  S  *  G  P  I  S  F  G  S  R  S  C  *  I  S  C  P  C  R  *  T  D  W  S  N  Y  F  L  C  F  Q  C  S  P  *  Y  N  I  S  T  G  G  R  K  W  G  Y  I  P  K  H  A  S  C  N  K  S  H  S  G  T  K  E  S  K  L  N  T  *  P  A  V  I  F  I  *  F  W  E  P  R  *  *  *  P  R  C  C  N  S  R  R  L  R  F  *  L  I  G  C  L  S  E  W  *  R  D  E  S  *  S  F  Q  F  T  K  I  E  L  T  D  L  V  L  F  C  S  L  C  S  V  V  L  K  L  C  T  F  C  V  V  C  Y  R  S  E  *  L  L  T  Q  S  I  I  *  R  N  *  L  *  I  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0280E02.2" strand="-"/>
                <serials PGL_serial="23" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="110865" stop="110575"/>
                    <exon start="106782" stop="106617"/>
                    <exon start="104652" stop="104165"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>942</number_coding_nucleotides>
                  <number_encoded_amino_acids>314</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NQAIAGDMKFGKEFSIHLEETLPEWRDKYLCYKPLKKLIKHIPSSTADNTPPLPPLPPATAAATELQDWFIRILNEELDKFNDFYVDKEEDFIIRFQELKERIERVKEKSDKDGVLATNNEFSEEMMNIRKDFVSIHGEMVLIKNYSSLNLAGLVKILKKYDKRTGGLLRLPFTQVALHQPIFTTEPLTRLVHECEANLEVLFPLEAEVVESAVPADEQIGATTSYASNVLPDTTFPQGEENGDIYRSTLAAIRAIQGLKKASSTHNPLSFSSNSGNQDNDSPGAVTAEDSDSDSLVASQNGEEMNREVSSSPK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 214 chains have been computed
$ 
$ memory statistics:
$ 1090672 bytes spliced alignments in total
$ 130 spliced alignments have been stored
$ 8389 bytes was the average size of a spliced alignment
$ 36888 bytes predicted gene locations in total
$ 23 predicted gene locations have been stored
$ 1603 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 260 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:18:27
-->
