<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:29:30"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U583921" ref_strand="+" ref_description="SGN-U583921 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|157341231|emb|CAO49138.1| (e_value=1e-21) unnamed; (*ATH) AT4G20060.1 (e_value=1e-19) | Symbol: EMB1895 | expressed protein, ; expression supported by MPSS | chr4:10854800-10859340 REVERSE | Aliases: F18F4.160, F18F4_160, EMBRYO DEFECTIVE 1895, EMB1895; ">
      <seq>gtactcgggactaccgagagggatggattacgtgctatggaaaatgctggagggagttcggctgtggataaatttgtgtgttttgatcctaatgagaaagggcaaggatttgcaacctgcttgctaaatgtttctgcactccctgtgggttcttaccaaatcaaatggcacagctgttgtatagacaaaaatggtgcttactggagccttatgcccctgaacactaatcagttcttcactgtacaggaatcttgtaatagtggtcagtctgttagagtgccatagattgcagtaatttagttagagctaggatgatatttctattatcagaacaaacaatctgaagcttattggtgaattgcctagtgtaacatggacccaatctgactgttaacaatagtgccagatttatagccatgtttacactatggttgatgctgcagggtggctgttaactgccactgcttggtagatggtggtggattagacatgtgcttgtgccagcaacgtgaagaaaacaacgaacatattttgctacatgtgtgtatatactcaggattatggaatagaatccttcaatggctacagggacaacctccgggatcacaaagctgggagcttacacttccaatggatattagggaatactatagggaattttagagctgcacaagcgtttaaaatgatatatgctaaatgtgtcaattacattgtttgacgaaattatattttattaaaatgatgtcaagaatcttaaaacgagagctagattagaattttattcatgctctcaaaagaagaagaaaaaggttgaaagttgttttatatttattaagtacttttgctcaatattgttaataatatatttttattatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="3979" stop="2508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3678" g_stop="2808" g_length="871"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="878" r_length="871" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-U583921" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>871</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U583921" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3678" e_stop="2808"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACTACCGAGAGGGATGGATTACGTGCTATGGAAAATGCTGGAGGGAGTTCGGCTGTGGATAAATTTGTGTGTTTTGATCCTAATGAGAAAGGGCAAGGATTTGCAACCTGCTTGCTAAATGTTTCTGCATTCCCTGTGGGTTCTTACCAAATCAAATGGCACAGCTGTTGTATAGACAAAAATGGTGCTTACTGGAGCCTTATGCCCCTGAACACTAATCAGTTCTTCACTGTACAGGAATCTTTTAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATT</genome_strand>
        <mrna_strand>GGACTACCGAGAGGGATGGATTACGTGCTATGGAAAATGCTGGAGGGAGTTCGGCTGTGGATAAATTTGTGTGTTTTGATCCTAATGAGAAAGGGCAAGGATTTGCAACCTGCTTGCTAAATGTTTCTGCACTCCCTGTGGGTTCTTACCAAATCAAATGGCACAGCTGTTGTATAGACAAAAATGGTGCTTACTGGAGCCTTATGCCCCTGAACACTAATCAGTTCTTCACTGTACAGGAATCTTGTAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565130" ref_strand="+" ref_description="SGN-U565130 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157341231|emb|CAO49138.1| (e_value=2e-39) unnamed; (*ATH) AT4G20060.1 (e_value=8e-30) | Symbol: EMB1895 | expressed protein, ; expression supported by MPSS | chr4:10854800-10859340 REVERSE | Aliases: F18F4.160, F18F4_160, EMBRYO DEFECTIVE 1895, EMB1895; ">
      <seq>gaaattcttattattgatcgtgtgaagcacattttggttaaaaaggattattggttgtcttataagctggcaaaatatgcggcatgcaatggtgcatggttagtaactgcttacatatttggggagctaatacctatggtccaatctgatctctgttgtttttggttaaaatccttatcccatctttcagaattagaaaggaaatttcagttgttcgggcttactctttctggaaatgcagctggggaaattatgacagctgatcagattgaaaatgttattggggccgccaacaagctttgttctttagaggaatcttttgatgcctctgtttctggtcttgcttttagttttcagagatggtttattactttaagatcaaaggttgttcgaactgtggcagatgtactaaaattattgagcatgaatttgctttcacaagatgccaccagtacaaaacaaatagaggcgaggattttggtttggcactcaaattcttctaaaggactcagctcattgttgcaactgcttgcccatgcttcttcccagttcatgatgctagtaaaggaatttgatctcttagcagcgtcattcattgtcatggacaggaaaagtatgaagatagtttctgatcttggattgagttgttcactgttagcttttagtactggattgacattacgtttggccagtttccgtggtaaacaaaattgtagtacttatggtcttgaaactacagacgagcaatttcatgctcagctagttcatgacttttgtagaagacttgggtttacagacatagagactagcaaaaatctgcggcatcttttggatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="5686" stop="4250"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5386" g_stop="4550" g_length="837"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="837" r_length="837" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-U565130" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>837</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U565130" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5386" e_stop="4550"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATTCTCATTATTGATCGTGTGAAGCAAATTTTGGTTAAAAAGGATTATTGGTTGTCTTATAAGCTGGCAAAATATGCGGCATGCAATGGTGCATGGTTAGTAGCTGCTTACATATTTGGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAGTTTTCAGAGATGGTTTATTACTTTAAGATCAAAGGTTGTTCGAACTGTGGCAGATGTACTAAAATTATTGAGCATGAATTTGCTTTCACAAGATGCCACCAGTACAAAACAAATAGAGGCGAGGATTTTGGTTTGGCACTCAAATTCTTCTAAAGGACTCAGCTCATTGTTGCAACTGCTTGCCCATGCTTCTTCCCAGTTCATGATGCTAGTAAAGGAATTTGATCTCTTAGCAGCGTCATTCATTGTCATGGACAGGAAAAGTATGAAGATAGTTTCTGATCTTGGATTGAGTTGTTCACTGTTAGCTTTTAGTACTGGATTGACATTACGTTTGGCCAGTTTCCGTGGTAAACAAAATTGTAGTACTTATGGTCTTGAAACTACAGACGAGCAATTTCATGCTCAGCTAGTTCATGACTTGTTAAGAAGACTTGGGTTTACAGACATAGAGACTAGCAAAAATCTGCGGCATCTTTTGGATTTC</genome_strand>
        <mrna_strand>GAAATTCTTATTATTGATCGTGTGAAGCACATTTTGGTTAAAAAGGATTATTGGTTGTCTTATAAGCTGGCAAAATATGCGGCATGCAATGGTGCATGGTTAGTAACTGCTTACATATTTGGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAGTTTTCAGAGATGGTTTATTACTTTAAGATCAAAGGTTGTTCGAACTGTGGCAGATGTACTAAAATTATTGAGCATGAATTTGCTTTCACAAGATGCCACCAGTACAAAACAAATAGAGGCGAGGATTTTGGTTTGGCACTCAAATTCTTCTAAAGGACTCAGCTCATTGTTGCAACTGCTTGCCCATGCTTCTTCCCAGTTCATGATGCTAGTAAAGGAATTTGATCTCTTAGCAGCGTCATTCATTGTCATGGACAGGAAAAGTATGAAGATAGTTTCTGATCTTGGATTGAGTTGTTCACTGTTAGCTTTTAGTACTGGATTGACATTACGTTTGGCCAGTTTCCGTGGTAAACAAAATTGTAGTACTTATGGTCTTGAAACTACAGACGAGCAATTTCATGCTCAGCTAGTTCATGACTTTTGTAGAAGACTTGGGTTTACAGACATAGAGACTAGCAAAAATCTGCGGCATCTTTTGGATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600851" ref_strand="+" ref_description="SGN-U600851 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gtatctacaggcaaaggcttctttgtttgcagccggatgcgtttctgaactggcagatgattttgcttatgtatttctggagatgcttggaggtctgttggtctcatctgaaacatcaagggctataaggttagctggaggacgtgcttttgctaaaatgtggtgcccaattttactagcagatatagctcataaggttcagtatttctctttaatatgagtttctgccaccaaatacatgtaaattttcttattgcacctgtgactcattccatggaccccctatccttctgtccctttccgctctattctaaaagaacttgttttttgaaaaagcactgttcagaaaccatgtaaatactcatatagatgacaaaattatgcatagtgaaatgcaatgtttttctttttcatgcatgacatgcaagtgatcatctctgaactaattgtgactattgctctagtttttgttacaagttcctcaaaataagtttttaatgataccaggccgatctgtattgtctgacaatttgcttaaatgatgaagaagtgagttcagatttctattgcagcactaaaattgactttttcatattgcagactggtgtgaagcttatcctagaatcttcggaaagaagaattctctttggtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="9879" stop="8629"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9580" g_stop="8929" g_length="652"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="653" r_length="653" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-U600851" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U600851" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9580" e_stop="8929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATCTACAGGCAAAGGCTTCTTTGTTTGCAGCCGGATGCTTTTCTGAACTGGCAGATGATTTTGCTTATGTATTTCTGGAGATGCTTGGAGGTCTGTTGGTCTCATCTGAAACATCAAGGGCTATAAGGTTAGCTGGAGGACGTGCTTTTGCTAAAATGTGGTGCCCAATTTTACTAGCAGATATAGCTCATAAGGTTCAGTATTTCTCTTTAATATGAGTTTCTGCCACCAAATACATGTAAATTTTCTTATTGCACCTGTGACTCATTCCATGGACCCCCTATCCTTCTGTCCCTTTCCGCTCTATTCTAAAAGAACTTGTTTTTTGAAAAAGCACTGTTCAGAAACCATGTAAATACTCATATAGATGACAAAATTATGCATAGTGAAATGCAATGTTTTTCTTTTTCATGCATGACATGCAAGTGATCATCTCTGAACTAATTGTGACTATTGCTCTAGTTTTTGTTACAAGTTCCTCAAAATAAGTTTTTAATGATACCAGGCCGATCTGTATTGTCTGACAATTTGCTTAAATGATGAAGAAGTGAGTTCAGATTTCTATTGCAGCACTAAAATTGACTTTTTCATATTGCAGACTGGTGTGAAGCTTATCCTAGAATCTTCGG-AAGAAGAATTCTCTTTGGTGA</genome_strand>
        <mrna_strand>GTATCTACAGGCAAAGGCTTCTTTGTTTGCAGCCGGATGCGTTTCTGAACTGGCAGATGATTTTGCTTATGTATTTCTGGAGATGCTTGGAGGTCTGTTGGTCTCATCTGAAACATCAAGGGCTATAAGGTTAGCTGGAGGACGTGCTTTTGCTAAAATGTGGTGCCCAATTTTACTAGCAGATATAGCTCATAAGGTTCAGTATTTCTCTTTAATATGAGTTTCTGCCACCAAATACATGTAAATTTTCTTATTGCACCTGTGACTCATTCCATGGACCCCCTATCCTTCTGTCCCTTTCCGCTCTATTCTAAAAGAACTTGTTTTTTGAAAAAGCACTGTTCAGAAACCATGTAAATACTCATATAGATGACAAAATTATGCATAGTGAAATGCAATGTTTTTCTTTTTCATGCATGACATGCAAGTGATCATCTCTGAACTAATTGTGACTATTGCTCTAGTTTTTGTTACAAGTTCCTCAAAATAAGTTTTTAATGATACCAGGCCGATCTGTATTGTCTGACAATTTGCTTAAATGATGAAGAAGTGAGTTCAGATTTCTATTGCAGCACTAAAATTGACTTTTTCATATTGCAGACTGGTGTGAAGCTTATCCTAGAATCTTCGGAAAGAAGAATTCTCTTTGGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U583921" ref_strand="+" ref_description="SGN-U583921 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|157341231|emb|CAO49138.1| (e_value=1e-21) unnamed; (*ATH) AT4G20060.1 (e_value=1e-19) | Symbol: EMB1895 | expressed protein, ; expression supported by MPSS | chr4:10854800-10859340 REVERSE | Aliases: F18F4.160, F18F4_160, EMBRYO DEFECTIVE 1895, EMB1895; ">
      <seq>gtactcgggactaccgagagggatggattacgtgctatggaaaatgctggagggagttcggctgtggataaatttgtgtgttttgatcctaatgagaaagggcaaggatttgcaacctgcttgctaaatgtttctgcactccctgtgggttcttaccaaatcaaatggcacagctgttgtatagacaaaaatggtgcttactggagccttatgcccctgaacactaatcagttcttcactgtacaggaatcttgtaatagtggtcagtctgttagagtgccatagattgcagtaatttagttagagctaggatgatatttctattatcagaacaaacaatctgaagcttattggtgaattgcctagtgtaacatggacccaatctgactgttaacaatagtgccagatttatagccatgtttacactatggttgatgctgcagggtggctgttaactgccactgcttggtagatggtggtggattagacatgtgcttgtgccagcaacgtgaagaaaacaacgaacatattttgctacatgtgtgtatatactcaggattatggaatagaatccttcaatggctacagggacaacctccgggatcacaaagctgggagcttacacttccaatggatattagggaatactatagggaattttagagctgcacaagcgtttaaaatgatatatgctaaatgtgtcaattacattgtttgacgaaattatattttattaaaatgatgtcaagaatcttaaaacgagagctagattagaattttattcatgctctcaaaagaagaagaaaaaggttgaaagttgttttatatttattaagtacttttgctcaatattgttaataatatatttttattatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="15583" stop="14112"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15282" g_stop="14412" g_length="871"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="878" r_length="871" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-U583921" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>871</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U583921" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15282" e_stop="14412"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGACTACCGAGAGGGATGGATTACGTGCTATGGAAAATGCTGGAGGGAGTTCGGCTGTGGATAAATTTGTGTGTTTTGATCCTAATGAGAAAGGGCAAGGATTTGCAACCTGCTTGCTAAATGTTTCTGCATTCCCTGTGGGTTCTTACCAAATCAAATGGCACAGCTGTTGTATAGACAAAAATGGTGCTTACTGGAGCCTTATGCCCCTGAACACTAATCAGTTCTTCACTGTACAGGAATCTTTTAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATT</genome_strand>
        <mrna_strand>GGACTACCGAGAGGGATGGATTACGTGCTATGGAAAATGCTGGAGGGAGTTCGGCTGTGGATAAATTTGTGTGTTTTGATCCTAATGAGAAAGGGCAAGGATTTGCAACCTGCTTGCTAAATGTTTCTGCACTCCCTGTGGGTTCTTACCAAATCAAATGGCACAGCTGTTGTATAGACAAAAATGGTGCTTACTGGAGCCTTATGCCCCTGAACACTAATCAGTTCTTCACTGTACAGGAATCTTGTAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565130" ref_strand="+" ref_description="SGN-U565130 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157341231|emb|CAO49138.1| (e_value=2e-39) unnamed; (*ATH) AT4G20060.1 (e_value=8e-30) | Symbol: EMB1895 | expressed protein, ; expression supported by MPSS | chr4:10854800-10859340 REVERSE | Aliases: F18F4.160, F18F4_160, EMBRYO DEFECTIVE 1895, EMB1895; ">
      <seq>gaaattcttattattgatcgtgtgaagcacattttggttaaaaaggattattggttgtcttataagctggcaaaatatgcggcatgcaatggtgcatggttagtaactgcttacatatttggggagctaatacctatggtccaatctgatctctgttgtttttggttaaaatccttatcccatctttcagaattagaaaggaaatttcagttgttcgggcttactctttctggaaatgcagctggggaaattatgacagctgatcagattgaaaatgttattggggccgccaacaagctttgttctttagaggaatcttttgatgcctctgtttctggtcttgcttttagttttcagagatggtttattactttaagatcaaaggttgttcgaactgtggcagatgtactaaaattattgagcatgaatttgctttcacaagatgccaccagtacaaaacaaatagaggcgaggattttggtttggcactcaaattcttctaaaggactcagctcattgttgcaactgcttgcccatgcttcttcccagttcatgatgctagtaaaggaatttgatctcttagcagcgtcattcattgtcatggacaggaaaagtatgaagatagtttctgatcttggattgagttgttcactgttagcttttagtactggattgacattacgtttggccagtttccgtggtaaacaaaattgtagtacttatggtcttgaaactacagacgagcaatttcatgctcagctagttcatgacttttgtagaagacttgggtttacagacatagagactagcaaaaatctgcggcatcttttggatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="17290" stop="15854"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16990" g_stop="16154" g_length="837"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="837" r_length="837" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-U565130" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>837</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U565130" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16990" e_stop="16154"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATTCTCATTATTGATCGTGTGAAGCAAATTTTGGTTAAAAAGGATTATTGGTTGTCTTATAAGCTGGCAAAATATGCGGCATGCAATGGTGCATGGTTAGTAGCTGCTTACATATTTGGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAGTTTTCAGAGATGGTTTATTACTTTAAGATCAAAGGTTGTTCGAACTGTGGCAGATGTACTAAAATTATTGAGCATGAATTTGCTTTCACAAGATGCCACCAGTACAAAACAAATAGAGGCGAGGATTTTGGTTTGGCACTCAAATTCTTCTAAAGGACTCAGCTCATTGTTGCAACTGCTTGCCCATGCTTCTTCCCAGTTCATGATGCTAGTAAAGGAATTTGATCTCTTAGCAGCGTCATTCATTGTCATGGACAGGAAAAGTATGAAGATAGTTTCTGATCTTGGATTGAGTTGTTCACTGTTAGCTTTTAGTACTGGATTGACATTACGTTTGGCCAGTTTCCGTGGTAAACAAAATTGTAGTACTTATGGTCTTGAAACTACAGACGAGCAATTTCATGCTCAGCTAGTTCATGACTTGTTAAGAAGACTTGGGTTTACAGACATAGAGACTAGCAAAAATCTGCGGCATCTTTTGGATTTC</genome_strand>
        <mrna_strand>GAAATTCTTATTATTGATCGTGTGAAGCACATTTTGGTTAAAAAGGATTATTGGTTGTCTTATAAGCTGGCAAAATATGCGGCATGCAATGGTGCATGGTTAGTAACTGCTTACATATTTGGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAGTTTTCAGAGATGGTTTATTACTTTAAGATCAAAGGTTGTTCGAACTGTGGCAGATGTACTAAAATTATTGAGCATGAATTTGCTTTCACAAGATGCCACCAGTACAAAACAAATAGAGGCGAGGATTTTGGTTTGGCACTCAAATTCTTCTAAAGGACTCAGCTCATTGTTGCAACTGCTTGCCCATGCTTCTTCCCAGTTCATGATGCTAGTAAAGGAATTTGATCTCTTAGCAGCGTCATTCATTGTCATGGACAGGAAAAGTATGAAGATAGTTTCTGATCTTGGATTGAGTTGTTCACTGTTAGCTTTTAGTACTGGATTGACATTACGTTTGGCCAGTTTCCGTGGTAAACAAAATTGTAGTACTTATGGTCTTGAAACTACAGACGAGCAATTTCATGCTCAGCTAGTTCATGACTTTTGTAGAAGACTTGGGTTTACAGACATAGAGACTAGCAAAAATCTGCGGCATCTTTTGGATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600851" ref_strand="+" ref_description="SGN-U600851 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gtatctacaggcaaaggcttctttgtttgcagccggatgcgtttctgaactggcagatgattttgcttatgtatttctggagatgcttggaggtctgttggtctcatctgaaacatcaagggctataaggttagctggaggacgtgcttttgctaaaatgtggtgcccaattttactagcagatatagctcataaggttcagtatttctctttaatatgagtttctgccaccaaatacatgtaaattttcttattgcacctgtgactcattccatggaccccctatccttctgtccctttccgctctattctaaaagaacttgttttttgaaaaagcactgttcagaaaccatgtaaatactcatatagatgacaaaattatgcatagtgaaatgcaatgtttttctttttcatgcatgacatgcaagtgatcatctctgaactaattgtgactattgctctagtttttgttacaagttcctcaaaataagtttttaatgataccaggccgatctgtattgtctgacaatttgcttaaatgatgaagaagtgagttcagatttctattgcagcactaaaattgactttttcatattgcagactggtgtgaagcttatcctagaatcttcggaaagaagaattctctttggtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="21483" stop="20233"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21184" g_stop="20533" g_length="652"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="653" r_length="653" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-U600851" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>652</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U600851" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21184" e_stop="20533"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATCTACAGGCAAAGGCTTCTTTGTTTGCAGCCGGATGCTTTTCTGAACTGGCAGATGATTTTGCTTATGTATTTCTGGAGATGCTTGGAGGTCTGTTGGTCTCATCTGAAACATCAAGGGCTATAAGGTTAGCTGGAGGACGTGCTTTTGCTAAAATGTGGTGCCCAATTTTACTAGCAGATATAGCTCATAAGGTTCAGTATTTCTCTTTAATATGAGTTTCTGCCACCAAATACATGTAAATTTTCTTATTGCACCTGTGACTCATTCCATGGACCCCCTATCCTTCTGTCCCTTTCCGCTCTATTCTAAAAGAACTTGTTTTTTGAAAAAGCACTGTTCAGAAACCATGTAAATACTCATATAGATGACAAAATTATGCATAGTGAAATGCAATGTTTTTCTTTTTCATGCATGACATGCAAGTGATCATCTCTGAACTAATTGTGACTATTGCTCTAGTTTTTGTTACAAGTTCCTCAAAATAAGTTTTTAATGATACCAGGCCGATCTGTATTGTCTGACAATTTGCTTAAATGATGAAGAAGTGAGTTCAGATTTCTATTGCAGCACTAAAATTGACTTTTTCATATTGCAGACTGGTGTGAAGCTTATCCTAGAATCTTCGG-AAGAAGAATTCTCTTTGGTGA</genome_strand>
        <mrna_strand>GTATCTACAGGCAAAGGCTTCTTTGTTTGCAGCCGGATGCGTTTCTGAACTGGCAGATGATTTTGCTTATGTATTTCTGGAGATGCTTGGAGGTCTGTTGGTCTCATCTGAAACATCAAGGGCTATAAGGTTAGCTGGAGGACGTGCTTTTGCTAAAATGTGGTGCCCAATTTTACTAGCAGATATAGCTCATAAGGTTCAGTATTTCTCTTTAATATGAGTTTCTGCCACCAAATACATGTAAATTTTCTTATTGCACCTGTGACTCATTCCATGGACCCCCTATCCTTCTGTCCCTTTCCGCTCTATTCTAAAAGAACTTGTTTTTTGAAAAAGCACTGTTCAGAAACCATGTAAATACTCATATAGATGACAAAATTATGCATAGTGAAATGCAATGTTTTTCTTTTTCATGCATGACATGCAAGTGATCATCTCTGAACTAATTGTGACTATTGCTCTAGTTTTTGTTACAAGTTCCTCAAAATAAGTTTTTAATGATACCAGGCCGATCTGTATTGTCTGACAATTTGCTTAAATGATGAAGAAGTGAGTTCAGATTTCTATTGCAGCACTAAAATTGACTTTTTCATATTGCAGACTGGTGTGAAGCTTATCCTAGAATCTTCGGAAAGAAGAATTCTCTTTGGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U583609" ref_strand="+" ref_description="SGN-U583609 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|157328204|emb|CAO17677.1| (e_value=3e-43) unnamed; (*ATH) AT5G67610.1 (e_value=1e-38) | Symbol: None | expressed protein | chr5:26978218-26980864 REVERSE | Aliases: K9I9.18, K9I9_18; ">
      <seq>cacaaactcgtacttgaagaagatggatcaattgacaccggagtatctcaatttgttgcttggtccattcgatttctcgcttctgcgttgattcttcagagttctgtggatcctttattgtgtgccgaggcatggatatgtggagttctgatctcatcaatcttgaggagactatgccgtcccaaatatgttctgcgctttttcaagaatttgtcacaaatagacacgagttatctctgggaatctcaggaattgtacgcatcaccgacaaaagggtcatatgattccaggacgttcaagacaaatctaaattgcacaatccgcccaggttttcctctcaagccacgaagtttgttgtcagaaaaagatacttactattctactttccataaaactcctgaacagaagaagctttcaaaggatgagtatgacaagataactaaagacaccacaaagaaggctatggaagagcttgtttcttccccggattttagcaaatgggctgttgctcacgcagataggattactcttgctccaaagaaagagacaactgctaggcagagaaggtggtaccaatggctatgacttgaaaatgtgattatagtggcggagaacttaggtgtccagacttgttgtaatgtgttccgcgtttttcacgtaggtagtgatcttttttttttttaagtatgtcttatgctgtagttctccacataaaaaaaggtttgtattatggtgtgattacattcttattactctgagctagtgtaacattattgacttttacaaggcactgaaactgactgcttcaaggactgtgctttaatgtttaatgaatgtaacaactggatagtggagataacattttgccactgtaaatgtcttgatgctttgatgttaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="27147" stop="25279"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26847" g_stop="26749" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26748" i_stop="26626" i_length="123">
            <donor d_prob="0.908" d_score="1.00"/>
            <acceptor a_prob="0.005" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26625" g_stop="26519" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="206" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26518" i_stop="26345" i_length="174">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.505" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26344" g_stop="26223" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="328" r_length="122" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26222" i_stop="26148" i_length="75">
            <donor d_prob="0.617" d_score="0.98"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26147" g_stop="25576" g_length="572"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="900" r_length="572" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-U583609" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>900</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U583609" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26847" e_stop="26749"/>
          <exon e_start="26625" e_stop="26519"/>
          <exon e_start="26344" e_stop="26223"/>
          <exon e_start="26147" e_stop="25576"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAAACTCGTACTTGAAGAAGATGGATCAATTGACACCGGAGTATCTCAATTTGTTGCTTGGTCCATTCGATTTCTCGCTTCTGCGTTGATTCTTCAGGTTTCCATTTATATGATAATACTACGAATCAATTTAATCCTCCAAAGTTCTCTCACTTTTTGTTAGTCTATATCCCTCAATAGAGTTCAATTGGGCACTGACATAACTTCATTTGTTTGTCAGAGTTCTGTGGATCCTTTATTGTGTGCCGAGGCATGGATATGTGGAGTTCTGATCTCATCAATCTTGAGGAGACTATGCCGTCCCAAATATGTTCTGCGCTTTTTCAAGTGAGTGCCTTTTTTAAAAAAAACTAAATAAAATCTTTTACCATCCTTCCTCTCCATTTTCTGAGTGATGCTTATGTAGTCTAGTTACTTTATTCTATTGTTATGTATATGGATGGATGACTTCCATTTTGGAGTCACTTTGTATTTTCACACTCCGGTTTTCATGCAAAGCAGGAATTTGTCACAAATAGACACGAGTTATCTCTGGGAATCTCAGGAATTGTACGCATCACCGACAAAAGGGTCATATGATTCCAGGACGTTCAAGACAAATCTAAATGGCACAATCCGCCCAGGTTTGCCTAAACTAATTATTAGTAGAAATGAAGAAGTATTAGGTGGAGTTTCTCTGAAGTGTATTTTTCCTGCAGGTTTTCCTCTCAAGCCACGAAGTTTGTTGTCAGAAAAAGATACTTACTATTCTACTTTCCATAAAACTCCTGAACAGAAGAAGCTTTCAAAGGATGAGTATGACAAGATAACTAAAGACACCACAAAGAAGGCTATGGAAGAGCTTGTTTCTTCCCCGGATTTTAGCAAATGGGCTGTTGCTCACGCAGATAGGATTACTCTTGCTCCAAAGAAAGAGACAACTGCTAGGCAGAGAAGGTGGTACCAATGGCTATGACTTGAAAATGTGATTATAGTGGCGGAGAACTTAGGTGTCCAGACTTGTTGTAATGTGTTCCGCGTTTTTCACGTAGGTAGTGATCTTTTTTTTTTTTAAGTATGTCTTATGCTGTAGTTCTCCACATAAAAAAAGGTTTGTATTATGGTGTGATTACATTCTTATTACTCTGAGCTAGTGTAACATTATTGACTTTTACAAGGCACTGAAACTGACTGCTTCAAGGACTGTGCTTTAATGTTTAATGAATGTAACAACTGGATAGTGGAGATAACATTTTGCCACTGTAAATGTCTTGATGCTTTGATGTTACTG</genome_strand>
        <mrna_strand>CACAAACTCGTACTTGAAGAAGATGGATCAATTGACACCGGAGTATCTCAATTTGTTGCTTGGTCCATTCGATTTCTCGCTTCTGCGTTGATTCTTCAG...........................................................................................................................AGTTCTGTGGATCCTTTATTGTGTGCCGAGGCATGGATATGTGGAGTTCTGATCTCATCAATCTTGAGGAGACTATGCCGTCCCAAATATGTTCTGCGCTTTTTCAA..............................................................................................................................................................................GAATTTGTCACAAATAGACACGAGTTATCTCTGGGAATCTCAGGAATTGTACGCATCACCGACAAAAGGGTCATATGATTCCAGGACGTTCAAGACAAATCTAAATTGCACAATCCGCCCAG...........................................................................GTTTTCCTCTCAAGCCACGAAGTTTGTTGTCAGAAAAAGATACTTACTATTCTACTTTCCATAAAACTCCTGAACAGAAGAAGCTTTCAAAGGATGAGTATGACAAGATAACTAAAGACACCACAAAGAAGGCTATGGAAGAGCTTGTTTCTTCCCCGGATTTTAGCAAATGGGCTGTTGCTCACGCAGATAGGATTACTCTTGCTCCAAAGAAAGAGACAACTGCTAGGCAGAGAAGGTGGTACCAATGGCTATGACTTGAAAATGTGATTATAGTGGCGGAGAACTTAGGTGTCCAGACTTGTTGTAATGTGTTCCGCGTTTTTCACGTAGGTAGTGATCTTTTTTTTTTTTAAGTATGTCTTATGCTGTAGTTCTCCACATAAAAAAAGGTTTGTATTATGGTGTGATTACATTCTTATTACTCTGAGCTAGTGTAACATTATTGACTTTTACAAGGCACTGAAACTGACTGCTTCAAGGACTGTGCTTTAATGTTTAATGAATGTAACAACTGGATAGTGGAGATAACATTTTGCCACTGTAAATGTCTTGATGCTTTGATGTTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588093" ref_strand="+" ref_description="SGN-U588093 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157328204|emb|CAO17677.1| (e_value=8e-32) unnamed; (*ATH) AT5G67610.1 (e_value=9e-25) | Symbol: None | expressed protein | chr5:26978218-26980864 REVERSE | Aliases: K9I9.18, K9I9_18; ">
      <seq>ccattgttggtgtaggatctttcattctaagctatgtgccccaattgttgcgttcaatactgcgcgagattggtgttggtgaagacatgtacaaccctgtatctggcaatatttctgctgcttttccttgtgattgctggagcttggttggggttttgggttgttcacaaactcgtacttgaagaagatggatcaattgacaccggagtatctcaatttgttgcttggtccattcgatttctcgcttctgcgttgattcttcacagttctgtggatcctttattgtgtgccgaggcatggatatgtggagttctgatctcatcaatcttgaggagactatgccgtcccaaatatgttctgcgctttttcaagaatttgtcccctatacacaccagttatctctggcaatctcaggaattgtacgcatcaccgacaaaagggccctatgattccacgacgttcacgacaaatctacatggcacaacccgcccaggttttcctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="27623" stop="25915"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27428" g_stop="27424" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="5" r_length="5" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27423" i_stop="27324" i_length="100">
            <donor d_prob="0.757" d_score="0.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27323" g_stop="27227" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="6" r_stop="102" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27226" i_stop="26911" i_length="316">
            <donor d_prob="0.816" d_score="1.00"/>
            <acceptor a_prob="0.859" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26910" g_stop="26749" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="264" r_length="162" r_score="0.994"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26748" i_stop="26626" i_length="123">
            <donor d_prob="0.908" d_score="0.98"/>
            <acceptor a_prob="0.005" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26625" g_stop="26519" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="371" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26518" i_stop="26345" i_length="174">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.505" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26344" g_stop="26223" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="493" r_length="122" r_score="0.902"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="26222" i_stop="26148" i_length="75">
            <donor d_prob="0.617" d_score="0.90"/>
            <acceptor a_prob="0.759" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26147" g_stop="26138" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="503" r_length="10" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-U588093" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588093" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27428" e_stop="27424"/>
          <exon e_start="27323" e_stop="27227"/>
          <exon e_start="26910" e_stop="26749"/>
          <exon e_start="26625" e_stop="26519"/>
          <exon e_start="26344" e_stop="26223"/>
          <exon e_start="26147" e_stop="26138"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATTGTGAGTATCTTTGCTAGTATGAGTATACTATTTAACAGTTATTCTTTGAGTCATTCTTTTGAAATTTTGTTACTAAGAGTTGCCATCGTTTTGCATTCAGGTTGGTGTAGGATCTTTCATTCTAAGCTATGTGCCCCAATTGTTGCGTTCAATACTGCGCGAGATTGGTGTTGGTGAAGACATGTACAACCCTGTATGTAAGTTCTTATTGGTTTTATTAGTTGCCTTATTGTTTGAACTTAGGGTTCATCTATTCATTTCGTTTAATATTGGGTTCTTGTTAGGAAAAACCTTTTGCTGAGAGTTTTCATGCCAGTAAAATCTACCTCATATAACTTGATTTTGAGTGCCTTTATACGTTAAATGTCAAAATTTAATGGCTGAAAAGCATATGCTGCTAACTCCTGCTGTTATTTCACGATAAGATGACTGAACTTTAATCTGATTGGTTTATGCACTGAGCATTCCACTTACCATGGAATTTAGGATGACATGGACCGTCTTTTATTGCAGCTGGCAATATTTCTGCTGCTTTTCCTTGTGATTGCTGGAGCTTGGTTGGGGTTTTGGGTTGTTCACAAACTCGTACTTGAAGAAGATGGATCAATTGACACCGGAGTATCTCAATTTGTTGCTTGGTCCATTCGATTTCTCGCTTCTGCGTTGATTCTTCAGGTTTCCATTTATATGATAATACTACGAATCAATTTAATCCTCCAAAGTTCTCTCACTTTTTGTTAGTCTATATCCCTCAATAGAGTTCAATTGGGCACTGACATAACTTCATTTGTTTGTCAGAGTTCTGTGGATCCTTTATTGTGTGCCGAGGCATGGATATGTGGAGTTCTGATCTCATCAATCTTGAGGAGACTATGCCGTCCCAAATATGTTCTGCGCTTTTTCAAGTGAGTGCCTTTTTTAAAAAAAACTAAATAAAATCTTTTACCATCCTTCCTCTCCATTTTCTGAGTGATGCTTATGTAGTCTAGTTACTTTATTCTATTGTTATGTATATGGATGGATGACTTCCATTTTGGAGTCACTTTGTATTTTCACACTCCGGTTTTCATGCAAAGCAGGAATTTGTCACAAATAGACACGAGTTATCTCTGGGAATCTCAGGAATTGTACGCATCACCGACAAAAGGGTCATATGATTCCAGGACGTTCAAGACAAATCTAAATGGCACAATCCGCCCAGGTTTGCCTAAACTAATTATTAGTAGAAATGAAGAAGTATTAGGTGGAGTTTCTCTGAAGTGTATTTTTCCTGCAGGTTTTCCTCT</genome_strand>
        <mrna_strand>CCATT....................................................................................................GTTGGTGTAGGATCTTTCATTCTAAGCTATGTGCCCCAATTGTTGCGTTCAATACTGCGCGAGATTGGTGTTGGTGAAGACATGTACAACCCTGTAT............................................................................................................................................................................................................................................................................................................................CTGGCAATATTTCTGCTGCTTTTCCTTGTGATTGCTGGAGCTTGGTTGGGGTTTTGGGTTGTTCACAAACTCGTACTTGAAGAAGATGGATCAATTGACACCGGAGTATCTCAATTTGTTGCTTGGTCCATTCGATTTCTCGCTTCTGCGTTGATTCTTCAC...........................................................................................................................AGTTCTGTGGATCCTTTATTGTGTGCCGAGGCATGGATATGTGGAGTTCTGATCTCATCAATCTTGAGGAGACTATGCCGTCCCAAATATGTTCTGCGCTTTTTCAA..............................................................................................................................................................................GAATTTGTCCCCTATACACACCAGTTATCTCTGGCAATCTCAGGAATTGTACGCATCACCGACAAAAGGGCCCTATGATTCCACGACGTTCACGACAAATCTACATGGCACAACCCGCCCAG...........................................................................GTTTTCCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U583610" ref_strand="+" ref_description="SGN-U583610 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157328204|emb|CAO17677.1| (e_value=2e-68) unnamed; (*ATH) AT5G67610.1 (e_value=8e-56) | Symbol: None | expressed protein | chr5:26978218-26980864 REVERSE | Aliases: K9I9.18, K9I9_18; ">
      <seq>gtagcaattccttcgcgtggagtatttgctcttcttctatggctcctcgtcgcattaacctccatagtccgcgctgatgaactttctttagttgtatctcaatctaccacgctgcagatatctccaggaatagtagtggaaaattctcctggctctaagccaggaacgaaagttatttgtgagagagttcagatccatggattgtcaaggctaaaaagtctaagaaagtatgcccattcagtaaaggtgaatgtgtcatatctgaatccaagtgggcgtccacctaatgctgaggtctgtttccataggaatcaatccgtggcaattgggatgtgtccgccaggccaatggatgaaaataaccaagggttcatgggtgcgatcaatgtcacctttcgagcacaggtttttggatattaggatgacaggctcatctaaggacacttttcaggtctcgctgcacgaagatttttatttgtatcgtgttgtgtttctggtattgggtatattgctacttgctctggcatccttccttagcaagtctctagtatttttctatggtggtgcgatggcagtaggggttattcttgtgatactgatggtccttttccagggaatgaagcttcttccgactggtaggaagagttcactagcaatattcttgtattcatccattgttggtgtaggatctttcattctaagctatgtgccccanttgttgcgttcanactgcncgagattngngttggtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="34619" stop="26969"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34319" g_stop="34229" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34228" i_stop="31708" i_length="2521">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31707" g_stop="31491" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="308" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31490" i_stop="29942" i_length="1549">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29941" g_stop="29784" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="466" r_length="158" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="29783" i_stop="29677" i_length="107">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29676" g_stop="29531" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="612" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="29530" i_stop="27487" i_length="2044">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27486" g_stop="27424" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="613" r_stop="675" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27423" i_stop="27324" i_length="100">
            <donor d_prob="0.757" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="27323" g_stop="27247" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="676" r_stop="751" r_length="76" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-U583610" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>752</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U583610" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34319" e_stop="34229"/>
          <exon e_start="31707" e_stop="31491"/>
          <exon e_start="29941" e_stop="29784"/>
          <exon e_start="29676" e_stop="29531"/>
          <exon e_start="27486" e_stop="27424"/>
          <exon e_start="27323" e_stop="27247"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGCAATTCCTTCGCGTGGAGTATTTGCTCTTCTTCTATGGCTCCTCGTCGCATTAACCTCCATAGTCCGCGCTGATGAACTTTCTTTAGGTAACTTTCTTTTAAATTTTAGGGTTCTGAAATATTCTTTTATCTTATCTTTCACGACTTAACGCAAAATTTTCAGGAGAAATTACTGAAGTATGTTAAGATTAGTGAGTTTTTTGACACTTTAAAGTATTGCTTTAGGATTTTAGTCCGTGTAAATTACTATAATTACAGAAAACTATGCCTCAACCCCGCATGCGGGGATTACAGTGGGTATCTTCTTGTTGTTGTGGTTGTAATTCTAAGAAGGGCTTACTGGTTTTGAGTTTTGACGTTGAAGTTGCTATAATTTGATGGTGTAATTTTAAGCTGTATTTAAGTTTTGATGGGTTAAAGTAGAAAAAGATAAATCTGTTCTTTACTTTGCTTGTTGTTTGTCAAAACTGCGATATTGAGAAGATACATTTTTTTAAAAAAGACCAGCAACAAGGATGTACTTGAGCAAGCATTGAGAAAATTATAAGCACATGTTGGTTAGAACAGAGTATGTTTGTTGGATATCAAGCATGCCTGACCCAGGATAACTTCATATGTGTTCAGTAGGAAGGAAATTGTTTTCCAACAAAACATTTTCTAGGAAAATAAGTGGTTTCTTATTTATATTCTTGCATTCGGTATGTAAGTAAAGAATATTATCCTAAAATTATTTCTATATGTCTAAGACAAGGGAAAGGAGGTAGGGGGGCCAGGGAGTGGGATGGGGCTGGACGGGTGTAGGTGGTGGGGTTGTGGGTGGTTGTGAGGGCGGGGAGGAGACAATGTGTCTTGCTTTCCCGATTTCCATTATGAAAATCATTTTCCTTATTTTAAAGGAGCTTCTTTTTCTAAAGCAAATATTTTCTAATTGTTTTGACCAACCAAATACTGGAAAATGTTTTCCTCCATACTGAATACTTCCTTTAATCAGAATATCTTTTCACTTCACTTAGTCAACAATTTCTACATGTGCAAGCAGAACGCAGAAACTACTCGACATCTTCAACTACACTGCCCAGTAACAGGAGATTAGTGGAACATATTTTTGTCTCTTTTTGGACTGAACTGGGTAACGTCTGGTAGTATAAAGGAGGAAGCCTATGTGAGATAGAATAACTGGATAGTTGGTATGTCCATCAGAAGAATCTGGAACTAATCCCTTTTTGTATCCTTTGGTGTGCTTGGAATGAAAGAAACAGTAGATATTTTGACGGAATAGTAATTCCAATACACTCCCTTAAAGCTAGATGTATTATATTTTTATACAGTTGGATTTGCCCTAACACATGTGAGTCCCCTGACAAATTTTTGGACTTCGTTATTTCCTTAACCTAGCATATGATGTACTATATTGGAGCTAACAAACTTTTGTGTTTTCTTCCTATTTTAAATTTTTGCATCTTCATGATGGCATCAATGATATCACTTCATAAACAAGGAGTTTAAAAAGTCAAACATGGACTCAACATCTTGAGAAACATTTGCATTTGCAATGTTGTCACGAAAAGATAGAAACATTACAGGCATTTTGTTGCTTATCAGAATTGGTACATTGAATATGGTATAAAAAAGGGGTTCCTGTGCTCCACAACTAGATGGCCTGGATATGTTTTCTATTTTTTCACTAACTGTAGTTCCCTTGTGGTTTTCACTTCTCAACTATCGGTAATACTGATTTCAATTCACTATAACCTCATGAATTGGTACTAGCATGTTCTTTGTTTGTTTGTTTTATTTTTATATTTCATATTCAAGTACTTGAACATATTGTGCTTTCTCCTTTTTTGAGTTCGCTTTGATGTTTTAAATCCTTATTTTGTGTCCATACATTGAGAGAGAGAGAGAGCTTAGTCAGCAAGTATTGGAAGTTTTCCTTGATAGCTCCTTCTTTAGTGTGGTTGGTGGCGCACTGCCCTTGCATAAATTTGAACAGTTAGGATTGGGCTTGCTGGTAAGAGGTGATCTCCTTAGGTGAAAAAGAGTTGTATAGAGTTCTTAGTTGTCCTTTTTGGCTATAGCTGTTAGCCAAGCATGAGCTCCTACAGAACATCAGTGGCGGACCCAGTATTTTCGTTTAGGGGGTTTCATAAATAAAAGTATAAACGTGTAAGCCTTTAAAAATGGGAACCTTGATCTTTTTGGTGTTTAAAACCACACTTTTAACACATTATTTAAAGTAAAAAAAAAACACTAAAAAAATGAGAAACAGTACACAATTTAAAAAAACTGAAAAAGAAAAATAGAACGCTCACTGGGATTCAAGCCAGTGACACACAACTTAATTTCAAGGGGACTTGCCACTGTGCCATCAACTTTTCTTTGTAATTGAGGAGGTTCAATATATATATATATATATATATATATATCTACTGAAATACAGGAAATTTACTTTATATATACGGTGTAATTTTTTGCCGAACCCCCTGCACGTGGGTCCGCCCCTGCAGAACATTATATCATGTTTATACCTTGAAATGGTGTATTTTTTTTGAACAATTAGTAGCTGGTTATACTCATTATAGTTTCTTTTTCTCTTTGTGTTGGACAGTTGTATCTCAATCTACCACGCTGCAGATATCTCCAGGAATAGTAGTGGAAAATTCTCCTGGCTCTAAGCCAGGAACGAAAGTTATTTGTGAGAGAGTTCAGATCCATGGATTGTCAAGGCTAAAAAGTCTAAGAAAGTATGCCCATTCAGTAAAGGTGAATGTGTCATATCTGAATCCAAGTGGGCGTCCACCTAATGCTGAGGTCTGTTTCCATAGGTGAGCCACTAACCCTTTGTTCCTTTGCTTATTAAACTAAGAAAATGTCTCCAATGATGCTTCTTATAGCACATTTTATTTCTTCTGCTGATCAGTAGTAATAGCATAATGGCTTTTATGATTGTGAAAAATCACAGTAGATGATTTTCTCAAAGAGAAAAATCATAATCGATGAGTTGCTGACAACTTGATATTTATAATATCGGTGTATGGTCTATCATCCTTCTTTTTATTAATATTACCTAGCTCTCTGCATAACAATGAGTTATGTGATAAAGAAATTGTTTTGAATCAGATGGCATGTTATTTAATCTCCAACCTTAAGTATTTGTTGCTACTCGTTAAAGTTGTGTCTGTATGTCATCATTTTTTTATTGGTCTGATAGATACCTAGGAATTCAGGTGTTAAATCTGTATGTTTGAGGGACATCATTTCAAGAGGTAAAATTGACACCCTTCCTCTTGTGTAATATAATGGCTAAACTAAACGTATGACCCATTTATAAGAAAAAAGTAACAGAAAATTCTAGTATGACTTGTCTAATGGTAGTTGGTTTTGCTTCCAAGTTTATACCTTTGAGCTCTTTTCTTTGAGAATGGTAAACTTTACTTCTATATATCTATACTACAACAAAATGTAGTCCCCCATCACAAAAAGTTGTCTCTTTCCAAAATCCTAATAATATAATTAATTAGAGCCAATCAATTACATTAAAAACATCTTTTGTGGCTCTGTGCAATGTGCCGTCTATAACTACTTGTTAACACCAAAAATAGTAAAACCCTAAGCAGTCTGTCTTGATCTTTCGTATGTTGCTCTTTTGCCTTCAAAACATCTCTGATTCCTCTCTTTCCATATGGTCCGCCTAATACATGAGGAACCTGGAACAATCTTCCAGCTCTCCTCCTCCTTCACTGCTTTCTCTGTTCCAGCTTTTTAGCACTTATTTGATTCTCCCAGGTTTCACCTACCTGATCTTCCTATTATGGATGAATGTTTGCCGCAACTGGTCTGTCCATTTGTTGTGCATAAAGAGATGGTTGACTGGCTCTATCTGTTCTTCAAATAGATAGCATCTAGACCATAGGTTGACTTTCCTCTTGTTAAGGTTTTCGTGTGTGAGGACTGCTTCCTTTGCTAATAACCATGTAAAGTAGTTTACCGTATAACGGTATAAGGCACTTTGGTCTTCAAGATCATTCTCCATGTCCATCCTATCTCCTGAGTATTTGTTGTAAGCTGACCTGACAGTTAAAATACCTCTGCTATCCACCTTCCACTCCAAGCTGTCCTTTTCTTCTGTAAAAATGGAGCTTTGAGGGACTGTATTATGAAAAGCTGTTTTAAAGGTCATTTCCCAGTCATTTAGGTTCTATCCTTTTGAGCTCATAATATGAAACTTCTCCAACTGAAATGTCATCTGATATAAAAGGAAGATCAAGAGTCAGAGTTAGAACCTTTCGAAAGTTAGACAGGTATAGGTGATCCTCTTCATCTTTACTGTCTTAAATTTTTATAAATTGTTAAGGGTCATTATCATCTTTGCAGGAATCAATCCGTGGCAATTGGGATGTGTCCGCCAGGCCAATGGATGAAAATAACCAAGGGTTCATGGGTGCGATCAATGTCACCTTTCGAGCACAGGTTTTTGGATATTAGGATGACAGGCTCATCTAAGGACACTTTTCAGGTCTCGCTGCACGAAGGTTTGTTCTCCTGGGCCAATCTGAAATCAACTTCTTTTTGTTGTTTTGTTGCTTTTGGAATTTTAATTCAATTTACCAACCTTAATATACTTCATCCTTCTATGCAGATTTTTATTTGTATCGTGTTGTGTTTCTGGTATTGGGTATATTGCTACTTGCTCTGGCATCCTTCCTTAGCAAGTCTCTAGTATTTTTCTATGGTGGTGCGATGGCAGTAGGGGTTATTCTTGTGATACTGATGGTCCTTTTCCAGGTAACTTTGTACCCTTCATTATCAAAGAAGTATGCATACTTCCGTAAACTTGTCTGTTTTCTGAGTGCAAAGAAGAGCCTCTGCTAGGATTTCTAGATTCCCTTTTTTTAATATTGAAGAAGCATGCGCGCTCTTGTTGGGATTGTCTTTTCAGTTTCAAATCTTGATATTTTAGTTCAAATTTACATAGCAAACTGTTTTAGTTGATTTCAGTAGTTAAAATAATTTTTCACTCGTATTGTGCGAGATAATATTCTTCTTGAAATGTGAATTGTTTTGCAAATGTAAACTGCAGAGTAGCACCATAATAACTCCATGTTACTATTTTTACAAAAATCTTGTGCTGCTGAAGATGTATCTTTAACTTAGAAAAATCACCCCTATGTTGGCGGGAAAAAGAGGGAGAATAAAGCTAACTGTAAATTTTTGAATTTTTTTGGATTTGAGAATGATGACACCCCCTGGGGGTTTGTATATCCCTCCTCATCAATTCCTTGATGAGCTCTTTTGTGTGAATACAAAGTTACCCATTTCAAAAAAAAAAAAAAAAGCTAACAAGCTCGCTAAAATTGTTGACTAATCACATCACAAAGTAGATAAAGATAAGATATTGAAGAAGTTTAAAGTATCTTTGTTACCTGAGATTTGGACTTGGAAAGTATTTTTGACTAATTTTTTTTCTTTTGCAGTGATATTTTTTCCGAATATAATGAATCTTTAACTTCTAAAGTGTATAATTCATCTTTAATAGTTTAGGTTTCTTCCCCTAAATGGCACATGTGAATTAAATCGCAGATATGCTTAAAAAGAGGGAGGAAATGAGAACAATACAAATATAAGAATATCATAAATTACTTATTTTATTGCAAGGCATTTTCTGGATGTCCCAGGTTTCTGTGAAATAATGTTGTAAAAGGTCTTGCATAACTTATATAATATAAGATTGGCTATTATGCCCACTTTGGAGAAATGACATTTTTTGGGCCATTAGAAGGATTTGTAGGCAAACCAATCCCAACAAAGAAAAGGATAAGTAGGCAACTAAATTGAACAAAGGGAGTACAAGTACAACTTATCAACAATTTTTTTTTTGAGTTGTTAGTTCAAATTCTCATTTTATTCTTACCTCACGACAATATAATAATTATGAAATGGTGGAAATCTGGAAAATAATAATTTCTGCTGTTCAGAACTACAACAAATATAGCATGTGAACTGAAAAGCATACGGACGGATATGAAATAATTCCTAATTACTAATCATTAAATAGATGTTTCTCTAAAGAAAGCTAAATGGCTTTTAGGTGATACTATTCCATTGCAAAATTGGCAGGTGGTGTCCTGACTAACGATGGATGAGAGATCTGATCTCCGTGTATATAGAAACAAAAGAAACAATTTTATGTCCGCTTTACATATCAATAATTTTTTATAGCTGTTAATCTTATAATTATCATGTTAAAGAAGGCAACTCTTTTTAAACTATAAAGAAGGCAAATTACTTTAAAACTATAAATAAAAATTTTACACTGTTGTAGACGTGATTTCCTGTTTCAGATGAATTAATTCAACTTGAAGTGGACAGTTGATATCTGTGGTGAATTAGTCCTAATTTTGATTTCATGATGTAGGCAAAGATCGTGGTATTTTAGAGGTGTACAAGATATTTTTTTAAGTTACTTGAAGTCTTAGTGTTATGTGGTAAATTAGTTTTAGCTTAATAAAAAGCTTATATTCCAATCTGGGAGCCAATCAAGAAATTATAGATTTACAACTTTGAATGCTACATTAGAAACATCATCATTCCAACTTACAATCCAATCATGTGACTTTGAGTATGTCATAGTCAACAATGTTAATCAATCAGAAAATATTCAATATTTTATTTTATCTTGAGCTATGTGCATGACAGCTGTATCATGTACGAATGTGTGTAGATGTATAATTGTAGGTATAATATCATCCTTATCAAGAAAACTAAACATGTAGGTCTATCAGGCTTCTATGTTGAAATTTTCTGATTGGTAGTTGTATTCTAATGACAGGGAATGAAGCTTCTTCCGACTGGTAGGAAGAGTTCACTAGCAATATTCTTGTATTCATCCATTGTGAGTATCTTTGCTAGTATGAGTATACTATTTAACAGTTATTCTTTGAGTCATTCTTTTGAAATTTTGTTACTAAGAGTTGCCATCGTTTTGCATTCAGGTTGGTGTAGGATCTTTCATTCTAAGCTATGTGCCCCAATTGTTGCGTTCAATACTGCGCGAGATTGGTGTTGGTGA</genome_strand>
        <mrna_strand>GTAGCAATTCCTTCGCGTGGAGTATTTGCTCTTCTTCTATGGCTCCTCGTCGCATTAACCTCCATAGTCCGCGCTGATGAACTTTCTTTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTATCTCAATCTACCACGCTGCAGATATCTCCAGGAATAGTAGTGGAAAATTCTCCTGGCTCTAAGCCAGGAACGAAAGTTATTTGTGAGAGAGTTCAGATCCATGGATTGTCAAGGCTAAAAAGTCTAAGAAAGTATGCCCATTCAGTAAAGGTGAATGTGTCATATCTGAATCCAAGTGGGCGTCCACCTAATGCTGAGGTCTGTTTCCATAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCAATCCGTGGCAATTGGGATGTGTCCGCCAGGCCAATGGATGAAAATAACCAAGGGTTCATGGGTGCGATCAATGTCACCTTTCGAGCACAGGTTTTTGGATATTAGGATGACAGGCTCATCTAAGGACACTTTTCAGGTCTCGCTGCACGAAG...........................................................................................................ATTTTTATTTGTATCGTGTTGTGTTTCTGGTATTGGGTATATTGCTACTTGCTCTGGCATCCTTCCTTAGCAAGTCTCTAGTATTTTTCTATGGTGGTGCGATGGCAGTAGGGGTTATTCTTGTGATACTGATGGTCCTTTTCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAATGAAGCTTCTTCCGACTGGTAGGAAGAGTTCACTAGCAATATTCTTGTATTCATCCATT....................................................................................................GTTGGTGTAGGATCTTTCATTCTAAGCTATGTGCCCCANTTGTTGCGTTC-ANACTGCNCGAGATTNGNGTTGGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U593963" ref_strand="+" ref_description="SGN-U593963 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157329050|emb|CAO23915.1| (e_value=7e-31) unnamed; (*ATH) AT5G65840.1 (e_value=6e-31) | Symbol: None | expressed protein | chr5:26360956-26363289 REVERSE | Aliases: K14B20.1, K14B20_1; ">
      <seq>ggggactcttagctagaaaaattgggctaagaagttgccaattttttcttccacaaattttcatttcaacccacttgcaatctgcaaccatggaatctctccagcagagtagcctaacatttgctacaaaatttccttctttttgttccttctctcccactcccaacacctccaagtttcttcaccctttcccttcctctgctattcctctcaccgccactacaccaaaacgaatttctagttttgtgcctaaagctgctgcttccaccgctgcctttgctcaagacattggtgatgtactagcagatgtttcaattttcactgctactggtcagtccgtcaagtttgaggacctttgggatcaaaatgagggagtagctgntgttgcacttctgaggcattttggctgtccttgctgctgggaacttgctaaagcactcaaagagacaaaggagagatttgattctgctggtgnnaagctnnntgcagttgnnnnttggtgctcctaacaaagcacgtattctcgctgaaaggttaccatttccattggatngnttngtatgctgatccanaccgcaaggcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="46059" stop="51732"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46355" g_stop="46725" g_length="371"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="371" r_length="371" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46726" i_stop="48579" i_length="1854">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48580" g_stop="48626" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="418" r_length="47" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48627" i_stop="48730" i_length="104">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48731" g_stop="48845" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="534" r_length="116" r_score="0.904"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48846" i_stop="51386" i_length="2541">
            <donor d_prob="0.999" d_score="0.88"/>
            <acceptor a_prob="0.934" a_score="0.89"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51387" g_stop="51431" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="535" r_stop="580" r_length="46" r_score="0.889"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-U593963" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U593963" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46355" e_stop="46725"/>
          <exon e_start="48580" e_stop="48626"/>
          <exon e_start="48731" e_stop="48845"/>
          <exon e_start="51387" e_stop="51431"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATACTCTTAGCTAGAAAAATTGGGCTAAGAAGTTGCCAATTTTTTCTTCCACAAATTTTCATTTCAACCCACTTGCAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAGGTATTGCTATTTCACAATTCTAACAACTCAATTTCCTATTTTTGGGGATTTTTCTTTTCATCTTCCCAACTATTTGTTTTAATGTGCTGTGCAAATTTCTGGATTGCTAACACCTTGTTTGGATGGTTGTTAACGCAGTACGGTATTGTATTGTTAGTTTAAATACAATGTTTTTAAGTATCTATTTTATCTTTTGATTTAATTTCAAGATTCATTTTACGTAATGATCGAATTTGGTGTGATCCCTTATTTAAAATTATTTTTGTTGGGTTTAGCAAGTGTAAATGGGAAAAGAAAAGAGTGATATGAAAAGTGAGGGAACTATTTTGGAGTGAAAATGAAAATTTTGCAAATGAAAAGTCATTTCTCTTATATCGGCAAAAGAAAGGAAAATTGTTGTCCTTATATAAAGAGGAAACACTTCCTTTACTTCTTAAAGAGCTAAGTTCGGCAAAAATGATGTGATTGAAACAATCTTTGTTAATCAAATAAATTCTATTAAATATTATCTCTTAAATTAATTTAGAACGTTAGTTAATTAACAGAATTAATTCGTGTGATTGAATCAATTTTTGTTAATCAAATAAATTCTGTTAATATTATCTCTTATAAATTAATTTAGATCGTTAGTTAATTAGTTAATTAACGGAATTAATTCGCTGATTACAGTAACATTTCAAAAAGTTATTACTCTTTTCGAAAAGTCGTTATTTCCTAACAGACTCATTTTCCGAAAAAACGGGTCTGAACACATTTTTCTGAACAGACACGTTTCTTGCTAAAAATGACTATAAAAGGAAGTCATTTTTCGTTTTTTCAAACACTGAAATTTTCCTTCTCTGCATATATTTTTCTCTCAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGCTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGATTAATCCATTTTATCTTGGGAGAAATTAATCCATAACCTCGTGTACAGTGGGATTAAATTTCTTAAGGAGACACGGTAGTTTCTATGGACTCGAATTATTTTGTATTTTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTTGTTAACCTTATAAATACAGGTTGATAACAATTTTAATAATTATATTTCATCTTTTATACTACCTTTTTCATAGTAGTTCAACCACGTATCCTACTTATCTATTAGGTTTATTGGTTAAATTATGGATGTGTGACATTATGTAATGACGGAGAACAATACAATCTTAAAACAATACAGTATGATACAATATAACATAATATGATACATTATGAAACAATACTTAACAATTACTCGGACAAACTGTAAAGAGAATCCTTTCTTACTATAACAATACAACAAGTGACTAATTAAGTTGTTGAGAGCCTTGATGTCGTAAATTAAATCTAGAAATAAAAACAGTAGGTGGTTCTTCTCATTTGTACTAGCCTAGGTGGTATACCTGGTGCTGGTGGGAGGTGCAAGTATCTCGTGGAATTAGTTGAGGTGTGCTAAAGGTAGGGTGGACACCATGGTCATTAAAAATTAAATAATAATAAAAAGATAACAGTATAACTAGTACATATTTAAGGTATGCCCAGGCTGACTGAAACAATAAAGAAGAAAAAAAATGGAAATTTACTTAATAGGGGCAGGAAAGATTAGAAACTTAAGGCAAACAATTCGGTGGTGCATATATGGTTTAAATGGAAAAATGGGGCTTGATGCCTATGTTATCATGGAGCTACCTATCTCCGTTTCATGAATTTCAAATGGCTGACCGACGTTTTCTGGTAGCATAATTACATTTTGTTATTGGGTCGTTATCTTCACCAGGGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTGGTAAATTATGACCTCACTTTTTCTATCAAGACTTTTTGTTTTGGTGTTTTATATACAATTTTTGTTTTTGATATTCTTGTTCGATATGCATTGCTGTTTGTTAGCTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTG-GTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGGGTATCTTCATTTCACCTTGGCTGTTACTTCGAATGATTTAGTTCTTTGACATATTATTTCTAATGTTTCAAATAAGCTAGTTAAGGTCATACATGTCATATCAAACTTCTGGCTCAATTGACTCCATGAACTTAAGGTTCCTTCAGAAACATATTTAAATTCAAAGTTGAAGTTTTTGTTTGAATTGTTTCGTTCAAATATGAAATCCATGAGTGGAAGTTGAATATTTGTGAAAACTTACTCGAAATATGCCTTCAACTTGAAAAAATTTATTCAAGTTTAAGTTACAATTGCGTTCTCAGTTTCATGAATTAAAGTTGACATGCAAGCTTAAATCTCTTTATTTGCAAGTCAAGTCCACAAACAAACACCACATAATTGATTCAAGAAATGTCAAAATGTGGTTTCTGCAAGAAAATAGTGTCACTTGCCTCAACTATTGACTGACCTTAGTTTGGAAGCAATAGAACTATATGTCGTCGGTTGAAATTTGATACTGTTTGTCCGAATTTGCCTCTATTCTGATTTGGAAGAAGTTTGCTTGATTTTGCTACTTAAATATAGAGTTAGTATGTCCTAAACAGAGAACCAATATGGACTTATGCATGGTATATCTACAACAAAGGCTATATTTCTGCTAAGAAGATTGATCAAAATTTATCAAGAAAGATCTAAACATGGTGTCATCGAGAGAAAACATATGATAAAGTACCATGAAAGGTCCTCTGGTCCTTTGGTGGGTGATGGAAAAGAAAATAGTCCATATTAAATATCTTAAGGCCATAAAGGACATGTATAAAGAAGTTGTTACTAGTGTGAAAATAGTAGGAGATACAAAAAAGAATTCCTATAACATTGAGTCTATAACAGAGATTGATATTGAGTCCCTACTTGTTTACCTAGTTATGAATGAGCTAACCACCAAAATACAAGATGGTTCTATGGGGTGTATTTGCTGACAAAAGTGTTGATTGCTGAAACCAACAGGGATGTCAACCAGAAGCTTGATCAATGGGGAAGCAGTTAGATACGGGTTTTAGGATGAATAGAAGTACGACAGAATACATGCACGACGAGTTTAGTCCGCATGAGAAGAGTGAAGTTGAGATGAGGCTAGATGAGTGGTGCCAAATGCTTAGATATCTAGGCTTGTCGTTTCAGGAGACTGGAATGGCAGATGAGCGTTACTCATAGAATGTTAGATGGTTGAAAAGGAAAACTACTGAGCCAAGAGTCTTTCGAAAACAGCTCAGTAAGGGTAAGGTTTGGGTACACTCTATCTTCCTAGACCCCACTTGTGAATTACATTGGATATGTTGGTGTTGTTGTTGAAAAGGAAAACTACCACTAAGGTTTTATGTAATCAGAGGATGTCTACAAAAGTGAAAGGTAAGTTCTAAAGGACAATTATACCAATAATGTTATATATATGGTAGTGAATGTTGGATTACTAAAATCCAACATATTCACAAGATGAGTGTTCCAGAGATGTGACCGCTAAGATGGATATGTGGTCATACAAGATCAGAAAAGATTAAAAATGAGCATATTAGGCAAAAGGTGCAAGTAACACGAGTTGAGGATAAAATGAGAGAAGATCGCTTGAGATGGTTTGGTCATGTCTTTAATCGACCTACCTACGTATGCATCATTCTGTAGATGTGAAACTATGGTGATGGAAGGTGTTAAAAGGGAACTAGGTAGACCTAAAATCACGGGGAAAGAAGTTGTCTCGAAAGAGCTATAATTTCTTGGAACCAATGCAAACTTAGCTAAGAATATGACGACAATGGAAGAAAAAAATCTATATAGGTGATATTTACTTGTTGCAAATGAGTTTTTGGTCATATTAGTATGTGGATTTTGAACCTATTGTTTATCTAGGAGTATTATAACCTCATCGCAGATTTTACCTATAAAAATATCAAGAACTTTGTATGTTAAGGTGCATACAAGCTGGCCCCAACACCACGGATAACAAAGAGCACTGCTGTTGTTGTTGCTGCTAATGTGGACTTATATTCTCTGTTAATATGTTTTGCCTCTATAAGTGACATCTGGTGTGGTAAGGATGCATTTATTTTGAACTCCAATACTCCAGAAGCTGCCTAGCTCCATCTTATGCACGGCAGATCTAGCCTTTTTTATAAGCTAAAGCTGCAGTACTGATTCATTAAAATAGTTCCGATTTTGGAATCAAAGAACATAATAATAGAGTATTTTGAATTGCTTCCTTAATTTGTATTTCATAAAGTTCGATGCCAACTAATTGGGAGTAAACTTAGTGATTTTGGTACACTTATATTAGGCTGGTGTTGTAGACATACATTAGTTGGATTAAATTTGTCTTAAGAGACCAACTCGTTGACAACGGAAGGAAACTGTTTTAAAAGGTGGAATGAAAATTGAGGATTCTTCCAAAGTTATTTAGTACCGTGGCATGCTTCTTAATTGAAACTGTGAATCATCATGCTGTCAACAACTTGATTATATATTTGAAGGATCCTGAGCTGATTCTTTTTGCTTCATATTTATGGCCAGTTACCATTTCCATTGGATTGCTT-GTATGCTGATCCAGACCGCAAG</genome_strand>
        <mrna_strand>GGGGACTCTTAGCTAGAAAAATTGGGCTAAGAAGTTGCCAATTTTTTCTTCCACAAATTTTCATTTCAACCCACTTGCAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTCCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTAGCTGNTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTG........................................................................................................CTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGNNAAGCTNNNTGCAGTTGNNNNTTGGTGCTCCTAACAAAGCACGTATTCTCGCTGAAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCATTTCCATTGGATNGNTTNGTATGCTGATCCANACCGCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582871" ref_strand="+" ref_description="SGN-U582871 Tomato 200607#2 [18 ESTs aligned] (*GB) gi|157329050|emb|CAO23915.1| (e_value=8e-92) unnamed; (*ATH) AT5G65840.1 (e_value=1e-86) | Symbol: None | expressed protein | chr5:26360956-26363289 REVERSE | Aliases: K14B20.1, K14B20_1; (*SWP) sp|Q9ZUU2|U308_ARATH (e_value=3e-20) UPF0308 protein At2g37240, chloroplastic OS=Arabidopsis thaliana GN=At2g37240; ">
      <seq>gnnttanngccggggnntcttagctagaaaaattggagctaagaagttgccaattttttcttccacaaattttcatttcaacccacttgcaatctgcaaccatggaatctctccagcagagtagcctaacatttgctacaaaatttccttctttttgttccttctctcccactcccaacaccttcaagtttcttcaccctttcccttcctctgctattcctctcaccgccactacaccaaaacgaatttctagttttgtgcctaaagctgctgcttccaccgctgcctttgctcaagacattggtgatgtactagcagatgtttcaattttcactgctactggtcagtccgtcaagtttgaggacctttgggatcaaaatgagggagtagctgttgttgcacttctgaggcattttggctgtccttgctgctgggaacttgctaaagcactcaaagagacaaaggagagatttgattctgctggtgtaaagctaattgcagttggtattggtgctcctaacaaagcacgtattcttgctgaaaggttaccatttccattggattgcttgtatgctgatccagaccgcaaggcatacgatgttctaggcctgtattatggtgttggccgcacatttttcaacccagctagtgctaaagtgctctctagattcaatgaactgcgggaagctacgaagaactacaccattgaagcaacccctgatgacagaagtggtgtcttgcagcagggagggatgtttctgtttaaagggaagcagttgttgtatgcatggaaggatgaagggaccggtgaccatgctcctatggaagatatctttgatatttgctgcaaagttcctgttgcataaatgccttcaatctgtgtttcatctctattcgaatttccaagggaagtggatgcatatattggtttagttctctaattgtatatgttgtatgtaattctgaaacttgtaactaagggctcatttggtacaagcattaagggataatttttaattttaggatgggttggggataaaatcgtgaaataactttgtgccatcacctctagtatatgaggatgagaggtaaatagtccatatcagaaattgaaattgtatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="46061" stop="53591"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46361" g_stop="46725" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="383" r_length="366" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46726" i_stop="48579" i_length="1854">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.917" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48580" g_stop="48626" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="430" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="48627" i_stop="48730" i_length="104">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48731" g_stop="48845" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="545" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48846" i_stop="51386" i_length="2541">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="51387" g_stop="51431" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="546" r_stop="590" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="51432" i_stop="51525" i_length="94">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="51526" g_stop="51585" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="650" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="51586" i_stop="51675" i_length="90">
            <donor d_prob="0.571" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="51676" g_stop="51771" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="651" r_stop="746" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="51772" i_stop="52915" i_length="1144">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="52916" g_stop="53291" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="747" r_stop="1124" r_length="378" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-U582871" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>1104</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U582871" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46361" e_stop="46725"/>
          <exon e_start="48580" e_stop="48626"/>
          <exon e_start="48731" e_stop="48845"/>
          <exon e_start="51387" e_stop="51431"/>
          <exon e_start="51526" e_stop="51585"/>
          <exon e_start="51676" e_stop="51771"/>
          <exon e_start="52916" e_stop="53291"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTAGCTAGAAAAATTGG-GCTAAGAAGTTGCCAATTTTTTCTTCCACAAATTTTCATTTCAACCCACTTGCAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAGGTATTGCTATTTCACAATTCTAACAACTCAATTTCCTATTTTTGGGGATTTTTCTTTTCATCTTCCCAACTATTTGTTTTAATGTGCTGTGCAAATTTCTGGATTGCTAACACCTTGTTTGGATGGTTGTTAACGCAGTACGGTATTGTATTGTTAGTTTAAATACAATGTTTTTAAGTATCTATTTTATCTTTTGATTTAATTTCAAGATTCATTTTACGTAATGATCGAATTTGGTGTGATCCCTTATTTAAAATTATTTTTGTTGGGTTTAGCAAGTGTAAATGGGAAAAGAAAAGAGTGATATGAAAAGTGAGGGAACTATTTTGGAGTGAAAATGAAAATTTTGCAAATGAAAAGTCATTTCTCTTATATCGGCAAAAGAAAGGAAAATTGTTGTCCTTATATAAAGAGGAAACACTTCCTTTACTTCTTAAAGAGCTAAGTTCGGCAAAAATGATGTGATTGAAACAATCTTTGTTAATCAAATAAATTCTATTAAATATTATCTCTTAAATTAATTTAGAACGTTAGTTAATTAACAGAATTAATTCGTGTGATTGAATCAATTTTTGTTAATCAAATAAATTCTGTTAATATTATCTCTTATAAATTAATTTAGATCGTTAGTTAATTAGTTAATTAACGGAATTAATTCGCTGATTACAGTAACATTTCAAAAAGTTATTACTCTTTTCGAAAAGTCGTTATTTCCTAACAGACTCATTTTCCGAAAAAACGGGTCTGAACACATTTTTCTGAACAGACACGTTTCTTGCTAAAAATGACTATAAAAGGAAGTCATTTTTCGTTTTTTCAAACACTGAAATTTTCCTTCTCTGCATATATTTTTCTCTCAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGCTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGATTAATCCATTTTATCTTGGGAGAAATTAATCCATAACCTCGTGTACAGTGGGATTAAATTTCTTAAGGAGACACGGTAGTTTCTATGGACTCGAATTATTTTGTATTTTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTTGTTAACCTTATAAATACAGGTTGATAACAATTTTAATAATTATATTTCATCTTTTATACTACCTTTTTCATAGTAGTTCAACCACGTATCCTACTTATCTATTAGGTTTATTGGTTAAATTATGGATGTGTGACATTATGTAATGACGGAGAACAATACAATCTTAAAACAATACAGTATGATACAATATAACATAATATGATACATTATGAAACAATACTTAACAATTACTCGGACAAACTGTAAAGAGAATCCTTTCTTACTATAACAATACAACAAGTGACTAATTAAGTTGTTGAGAGCCTTGATGTCGTAAATTAAATCTAGAAATAAAAACAGTAGGTGGTTCTTCTCATTTGTACTAGCCTAGGTGGTATACCTGGTGCTGGTGGGAGGTGCAAGTATCTCGTGGAATTAGTTGAGGTGTGCTAAAGGTAGGGTGGACACCATGGTCATTAAAAATTAAATAATAATAAAAAGATAACAGTATAACTAGTACATATTTAAGGTATGCCCAGGCTGACTGAAACAATAAAGAAGAAAAAAAATGGAAATTTACTTAATAGGGGCAGGAAAGATTAGAAACTTAAGGCAAACAATTCGGTGGTGCATATATGGTTTAAATGGAAAAATGGGGCTTGATGCCTATGTTATCATGGAGCTACCTATCTCCGTTTCATGAATTTCAAATGGCTGACCGACGTTTTCTGGTAGCATAATTACATTTTGTTATTGGGTCGTTATCTTCACCAGGGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTGGTAAATTATGACCTCACTTTTTCTATCAAGACTTTTTGTTTTGGTGTTTTATATACAATTTTTGTTTTTGATATTCTTGTTCGATATGCATTGCTGTTTGTTAGCTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGGGTATCTTCATTTCACCTTGGCTGTTACTTCGAATGATTTAGTTCTTTGACATATTATTTCTAATGTTTCAAATAAGCTAGTTAAGGTCATACATGTCATATCAAACTTCTGGCTCAATTGACTCCATGAACTTAAGGTTCCTTCAGAAACATATTTAAATTCAAAGTTGAAGTTTTTGTTTGAATTGTTTCGTTCAAATATGAAATCCATGAGTGGAAGTTGAATATTTGTGAAAACTTACTCGAAATATGCCTTCAACTTGAAAAAATTTATTCAAGTTTAAGTTACAATTGCGTTCTCAGTTTCATGAATTAAAGTTGACATGCAAGCTTAAATCTCTTTATTTGCAAGTCAAGTCCACAAACAAACACCACATAATTGATTCAAGAAATGTCAAAATGTGGTTTCTGCAAGAAAATAGTGTCACTTGCCTCAACTATTGACTGACCTTAGTTTGGAAGCAATAGAACTATATGTCGTCGGTTGAAATTTGATACTGTTTGTCCGAATTTGCCTCTATTCTGATTTGGAAGAAGTTTGCTTGATTTTGCTACTTAAATATAGAGTTAGTATGTCCTAAACAGAGAACCAATATGGACTTATGCATGGTATATCTACAACAAAGGCTATATTTCTGCTAAGAAGATTGATCAAAATTTATCAAGAAAGATCTAAACATGGTGTCATCGAGAGAAAACATATGATAAAGTACCATGAAAGGTCCTCTGGTCCTTTGGTGGGTGATGGAAAAGAAAATAGTCCATATTAAATATCTTAAGGCCATAAAGGACATGTATAAAGAAGTTGTTACTAGTGTGAAAATAGTAGGAGATACAAAAAAGAATTCCTATAACATTGAGTCTATAACAGAGATTGATATTGAGTCCCTACTTGTTTACCTAGTTATGAATGAGCTAACCACCAAAATACAAGATGGTTCTATGGGGTGTATTTGCTGACAAAAGTGTTGATTGCTGAAACCAACAGGGATGTCAACCAGAAGCTTGATCAATGGGGAAGCAGTTAGATACGGGTTTTAGGATGAATAGAAGTACGACAGAATACATGCACGACGAGTTTAGTCCGCATGAGAAGAGTGAAGTTGAGATGAGGCTAGATGAGTGGTGCCAAATGCTTAGATATCTAGGCTTGTCGTTTCAGGAGACTGGAATGGCAGATGAGCGTTACTCATAGAATGTTAGATGGTTGAAAAGGAAAACTACTGAGCCAAGAGTCTTTCGAAAACAGCTCAGTAAGGGTAAGGTTTGGGTACACTCTATCTTCCTAGACCCCACTTGTGAATTACATTGGATATGTTGGTGTTGTTGTTGAAAAGGAAAACTACCACTAAGGTTTTATGTAATCAGAGGATGTCTACAAAAGTGAAAGGTAAGTTCTAAAGGACAATTATACCAATAATGTTATATATATGGTAGTGAATGTTGGATTACTAAAATCCAACATATTCACAAGATGAGTGTTCCAGAGATGTGACCGCTAAGATGGATATGTGGTCATACAAGATCAGAAAAGATTAAAAATGAGCATATTAGGCAAAAGGTGCAAGTAACACGAGTTGAGGATAAAATGAGAGAAGATCGCTTGAGATGGTTTGGTCATGTCTTTAATCGACCTACCTACGTATGCATCATTCTGTAGATGTGAAACTATGGTGATGGAAGGTGTTAAAAGGGAACTAGGTAGACCTAAAATCACGGGGAAAGAAGTTGTCTCGAAAGAGCTATAATTTCTTGGAACCAATGCAAACTTAGCTAAGAATATGACGACAATGGAAGAAAAAAATCTATATAGGTGATATTTACTTGTTGCAAATGAGTTTTTGGTCATATTAGTATGTGGATTTTGAACCTATTGTTTATCTAGGAGTATTATAACCTCATCGCAGATTTTACCTATAAAAATATCAAGAACTTTGTATGTTAAGGTGCATACAAGCTGGCCCCAACACCACGGATAACAAAGAGCACTGCTGTTGTTGTTGCTGCTAATGTGGACTTATATTCTCTGTTAATATGTTTTGCCTCTATAAGTGACATCTGGTGTGGTAAGGATGCATTTATTTTGAACTCCAATACTCCAGAAGCTGCCTAGCTCCATCTTATGCACGGCAGATCTAGCCTTTTTTATAAGCTAAAGCTGCAGTACTGATTCATTAAAATAGTTCCGATTTTGGAATCAAAGAACATAATAATAGAGTATTTTGAATTGCTTCCTTAATTTGTATTTCATAAAGTTCGATGCCAACTAATTGGGAGTAAACTTAGTGATTTTGGTACACTTATATTAGGCTGGTGTTGTAGACATACATTAGTTGGATTAAATTTGTCTTAAGAGACCAACTCGTTGACAACGGAAGGAAACTGTTTTAAAAGGTGGAATGAAAATTGAGGATTCTTCCAAAGTTATTTAGTACCGTGGCATGCTTCTTAATTGAAACTGTGAATCATCATGCTGTCAACAACTTGATTATATATTTGAAGGATCCTGAGCTGATTCTTTTTGCTTCATATTTATGGCCAGTTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAGGTTAGTATCTGCCTATCTCCACAACTATGTGACTGCTTCATTTTGCCTTTCACGATTTTTTCTTGGAGATTTTGACACTTTCCTTGTATCTCAGGCATACGATGTTCTAGGCCTGTATTATGGTGTTGGCCGCACATTTTTCAACCCAGCTAGTGTAATGATCTCAAGGAGTTTCCCTTCATAAAAATGATCATTCTGCTCCATGAGAATGACTTGATCTTTAACTAATTTTTTCCCTTGTCAGGCTAAAGTGCTCTCTAGATTCAATGAACTGCGGGAAGCTACGAAGAACTACACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAGGTTTAAGCTCTTTCTTCTACTGCTGCATTGTTATTCATGAATTAGGGGTGTCATGTTTAGCCCATAAAAATATAACCTGTCCAACACATCCAGACTTGAGCGGGTTAGTCTGGGTATATATTAGTTGGCATAACCCAAGTTAAACTCATTTAAAATCTTAGGACAATTTGTACTTCATATGTAGCCAAAGTTAGCTCATGTAAAAGATTGGTTCAATTTACGCTTGTATATGAAGCCCAAATTGACCCATACAAAAGCTTATCGAACATAGAAAAGTAAGCATGCACCCAAGGGTGTGGCCTAGTGGCCAATAAAGTAGTTAAGAGCATTGAAGTCTCAGGTTCAAATCTCAGATGGAGACAAAAAACACTAGGAGAATTCTTCCCATTTGTTCTAGCCCTGATCGACATAGTTACCTGGTACCTGCTGTTGCGCAAAAGCTGGCCCGGACACCACGGTTATCCAAAAAGAGAAAAGTTGGCCTTTTTGAGTTTGATTTATTTGATATAGCTATGATAAACAAAAGAATAAAGCTTTATTAGTTTGATTTAGTAATTAGACAAAGTATAAAAGAACAAATGAACCATAAATTGACTTGGATGGCTTGGGGTTATGAACTACTCCCTCCATCCACTATTGTTTTTCATGTATACTAAAAATAGTTGTCCAAAACTTGATTGTCACTTAAAACAATCAAGAAACAATTGGTCTTTTTTTTCTTTTCAATTCTGCCCTTAATAATTACATAACTACTTATTTCAAAAAGTAACCATTTAAAAGTTACAAGACTACTTTAATGTGAAAGAAAAGTTGTTTTTACAATTTTCAAAAAGTACAAACCATTTTAATAATGATTGATAATAGGGTTATATTAGTCAAATTGCACCTTATATTAAATTTTTCTTTAAGGGTTGTGCATGATCTTATCCTTACAAACAATAGTGGACGGAGGGAGTATTGTTTAGTCTAAATTAGTTGGCTCATCGTCAACCGAGAAACTATTGAGTGGGTTGTGATCCAGCCCGTATATCATGTTGACCCAAATATAGTCCAACCCGCTCATTTGACACCCGTACAATCAAGATTTCCGTCAAGCTCTTGGTTTATGTCGAGATAGTAATATTCGTTTGTATGTTGATACCAGGGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCATGGAAGGATGAAGGGACCGGTGACCATGCTCCTATGGAAGATATCTTTGATATTTGCTGCAAAGTTCCTGTTGCATAAATGCCTTCAATCTGTGTTTCATCTCTATTCGAATTTCCAAGGGAAGTGGATGCATATATTGGTTTAGTTCTCTAATTGTATATGTTGTATGTAATTCTGAAACTTGTAACTAAGGGCTCATTTGGTACGAG-ATTAAGGGATAATTTTTAATTTTAGGATGGGTT-GGTATAAAATCGTGAAATAACTTTGTTCCATCACCTCTAGTATATGAGGATGGGAGGTAAATAGTCCATATCAGAATTTGAAATTGTATGAA</genome_strand>
        <mrna_strand>TCTTAGCTAGAAAAATTGGAGCTAAGAAGTTGCCAATTTTTTCTTCCACAAATTTTCATTTCAACCCACTTGCAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTG........................................................................................................CTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAG..............................................................................................GCATACGATGTTCTAGGCCTGTATTATGGTGTTGGCCGCACATTTTTCAACCCAGCTAGT..........................................................................................GCTAAAGTGCTCTCTAGATTCAATGAACTGCGGGAAGCTACGAAGAACTACACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCATGGAAGGATGAAGGGACCGGTGACCATGCTCCTATGGAAGATATCTTTGATATTTGCTGCAAAGTTCCTGTTGCATAAATGCCTTCAATCTGTGTTTCATCTCTATTCGAATTTCCAAGGGAAGTGGATGCATATATTGGTTTAGTTCTCTAATTGTATATGTTGTATGTAATTCTGAAACTTGTAACTAAGGGCTCATTTGGTACAAGCATTAAGGGATAATTTTTAATTTTAGGATGGGTTGGGGATAAAATCGTGAAATAACTTTGTGCCATCACCTCTAGTATATGAGGATGAGAGGTAAATAGTCCATATCAGAAATTGAAATTGTATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U578865" ref_strand="+" ref_description="SGN-U578865 Tomato 200607#2 [12 ESTs aligned] (*GB) gi|113205316|gb|ABI34339.1| (e_value=8e-164) Polyprotein,; (*SWP) sp|Q99315|YG31B_YEAST (e_value=2e-17) Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-G; ">
      <seq>aagaacagcgacaaggggccgtggtagaggtcgtgggaggacgtcctctaggggaagaggacgagcgcctagcccatctgatactagggcagtgactcctccaccgactgaggaagtaataagagaaggggaggatggggaaactgaacaagtgcagaatgagggattgccaccccaacctaccccagagatgatcaatcaggttctggcttatcttagcgggttatctgatcagggccagacacccccagtgttttctgcaccagcacctcaggctccggaggtacaacatgcggctactatggctccccgcatggatgttccattggaaataggcacgtttccacgtctgactactgggcctataatgacaaatgatcagcatgaacttttcagtaagttcttgaaattgaaacctccagtcttcaagggtgcggaatcggaggatgcttacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagttcgtgagttatcagtttcaagggaacgccaaaatgtggtggcggtcacatattgagtgtcaaccaacagaggcaccacctatgacttgggcctcattctctagcttgtttatggagaagtatatcccccgaactttgagggataggaaaagggatgagttcttgagcctagagcaaggtaggatgtcggtcaatgcatatgaggctaagtttcgtgcattatcccggtatgccacccaactgtgtttcagtccacaagagcgaattcgccggtttgtgaaggggttgaggtcagaattgcagatttcggccttacaaatagcggcaacgacaaaatccttccaagaggtggtagactttgtgatagaagtggaaggagtgaagccagacgacttcatcccgacatcgacatcaaaaaggtttcgaaagggaggtgagtttaatggtgcttacactagaggacagggttagggaagttactcagtccgaccaattcagtcttcactacagactgtagttgggggtccacctccgaccggtcaacacttctctgagagacctatgcatgaacccagagagtgctatggatgtggggagattggacatattaagagatattgtccaaaacagagttacagacctccaaaggttagaggtagaggtggtcatggcagaggccgttattctggaggacgtggcggtcgaggaaatggtggtcaccaaaacggccgaggtgatgggaaaactggagccactacatcacaacaaggtaggggcaacagacagaagaacgatagggcccattgttacgctttccctgggcggtctgaagcggaggaatctgatgctgtcatcacaggtaatcttttggtttgtgattgcatggcttctgtattgtttgatcctggatccacgttttcttatgtatcttcctcatttgctaacggtctaaatttacattgtgaattacttgatatgcctattcgtgtttctactccggtgggtgagtctgtggtagttgaaaaggtatataggtcttgtttggtgaactttgtggggagcaacacttatgtagatttggttatcttagaaatggttgattttgatgtaattctgggtatgacttggctttctccgcaatttgcgatcttggattgtaatgctaaaacggtgacattagccaagcctgggacagatccgttagtgtgggagggtgactacacttccaatccggtgcgcatcatctcctttcttcgtgctaagaaaatggttagtaaagggtgtttagctttcttggcacatctcaaggatgacactacccaagtaccttcgattgagtcggtttctatagtctgtgagtttttggatgtgttccctgcagatcttcctggtatgccaccagatagggatattgacttctgtatcgatcttgaaccgggcacacgccccatttctatacccccttatagaatggctcccgtagagttaagagagttaaaggcccaacttcaagagttgttgagcaaaggtttcattagaccaagtgcatctccttggggtgctccgattttgtttgtgaagaagaaggatgggagttttagaatgtgcatagactacagacaactgaacaaggtaactattaagaacaagtatcctcttcctcgcattgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="67908" stop="70699"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68208" g_stop="70400" g_length="2193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="2192" r_length="2192" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-U578865" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>2193</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U578865" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68208" e_stop="70400"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGCAGCGGCAAGAGGCCGTGGTAGAGGTCGTGGGAGGACGTTCTCTAGAGGAAGAGGACGAGCACCTAGCCCATCTGATACTGGGGCGGTGACTCCTCCACCGACTGAAGAAGTAATAAGAGAAGGGGAGGATGGGGAAAATGAACAAGTGCAGAATGAGGGATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATCAAGGTCAGGCACCTCCAGTGTTTTCTGCACCAACACCTCCGGTTTCAGAGGTACAACATGCAGCCACTATGGCTCCCCGCATGGATGCCTCATTGGAAATAGGCACATTTCCTCGTCTGACTACAGGGCCTGTAATGACAAATGATCAGCATGAAATTTTCAGTAAGTTCTTGAAATTGAAACCTTCAGTCTTCAAGGGTGCTGAGTCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAATAGAGGCACCACCTATGACTTGGGCCTCATTCTCTAGTTTGTTTATGGAGAAGTATATCCCCCGGACTTTGAGGGATAGGAAAAGGGATGAGTTCTTGAGCCTAGAGCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCAAGGTATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAGGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACAGCGAAATCTTTTCAAGAAGTGGTAGACTTCGTGATAGAGGTGGAAGGAGTGAAGCCAGATGAATTCACCATGGCATCGACATCAAAGAGGTTTCGAAAGGGAGGTGAGTTTAATGGTTCTTACTCGAGAGGACAGGGCTCCGGAGGTTACTCAGTTCGACCCATTCAGTCTTCACTACAAACTGTAGTTGGGGCTCCCCCTCAGACCGGTCAACACTTCTCTGAGAGACCTATGCTCGAATCTAGAGAGTGTTATGGATGTGGGGAGACTGGACACATTAAGAAGTATTGTCCAAAACAGAGTTACAGACCTCCAAATGTTAGAGGTAGAGGTGGTTATGGAAGAGGCCGTTATTCTGGAGGACGTGGTGGTCGAGGTAATGGTGGCCACCAAAACGGTCGGGGTGATGGGCAAGCTGGAGCCACTACATCACAACATGGTAGGGGCAACGGACAGACAGGTGAGAGGGCCCATTGTTACGCTTTCCCCGGGCGGTCAGAAGCGGAAACATCAGATGCTGTTATCACAGGTAATCTTTCGGTTTGTGATTGCATGGATTTTGTATTGTTTGACCCTGGCTCTACATTTTCATATGTATCTTCCGCATTTGCTAATGGTCTTGATTTACATTGTGAATTTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAAGGTGTATAGGTCTTGTCTTGTAACTTTTATGGGGAGCAATACTCATGTAGAGTTGGTTATCTTAGAAATGGTTGACTTCGATGTAATTCTGGGCATGACTTGGCTTTCTCCAAATTTTGCGATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTTCGTATCATCTCCTTTCTTCGTTCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATTGACCTTAAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCTGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGATTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTCGAATGTGCATAGACTACAGACAACTAAACAAGGTAACCATAAAGAACAAGTATCCTCTTCCTCGCATTGATG</genome_strand>
        <mrna_strand>AAGAACAGCGACAAGGGGCCGTGGTAGAGGTCGTGGGAGGACGTCCTCTAGGGGAAGAGGACGAGCGCCTAGCCCATCTGATACTAGGGCAGTGACTCCTCCACCGACTGAGGAAGTAATAAGAGAAGGGGAGGATGGGGAAACTGAACAAGTGCAGAATGAGGGATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTGGCTTATCTTAGCGGGTTATCTGATCAGGGCCAGACACCCCCAGTGTTTTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGGCTACTATGGCTCCCCGCATGGATGTTCCATTGGAAATAGGCACGTTTCCACGTCTGACTACTGGGCCTATAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCGGAATCGGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATATTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCCTCATTCTCTAGCTTGTTTATGGAGAAGTATATCCCCCGAACTTTGAGGGATAGGAAAAGGGATGAGTTCTTGAGCCTAGAGCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCATTATCCCGGTATGCCACCCAACTGTGTTTCAGTCCACAAGAGCGAATTCGCCGGTTTGTGAAGGGGTTGAGGTCAGAATTGCAGATTTCGGCCTTACAAATAGCGGCAACGACAAAATCCTTCCAAGAGGTGGTAGACTTTGTGATAGAAGTGGAAGGAGTGAAGCCAGACGACTTCATCCCGACATCGACATCAAAAAGGTTTCGAAAGGGAGGTGAGTTTAATGGTGCTTACACTAGAGGACAGGGTTAGGGAAGTTACTCAGTCCGACCAATTCAGTCTTCACTACAGACTGTAGTTGGGGGTCCACCTCCGACCGGTCAACACTTCTCTGAGAGACCTATGCATGAACCCAGAGAGTGCTATGGATGTGGGGAGATTGGACATATTAAGAGATATTGTCCAAAACAGAGTTACAGACCTCCAAAGGTTAGAGGTAGAGGTGGTCATGGCAGAGGCCGTTATTCTGGAGGACGTGGCGGTCGAGGAAATGGTGGTCACCAAAACGGCCGAGGTGATGGGAAAACTGGAGCCACTACATCACAACAAGGTAGGGGCAACAGACAGAAGAACGATAGGGCCCATTGTTACGCTTTCCCTGGGCGGTCTGAAGCGGAGGAATCTGATGCTGTCATCACAGGTAATCTTTTGGTTTGTGATTGCATGGCTTCTGTATTGTTTGATCCTGGATCCACGTTTTCTTATGTATCTTCCTCATTTGCTAACGGTCTAAATTTACATTGTGAA-TTACTTGATATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGGTAGTTGAAAAGGTATATAGGTCTTGTTTGGTGAACTTTGTGGGGAGCAACACTTATGTAGATTTGGTTATCTTAGAAATGGTTGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCGATCTTGGATTGTAATGCTAAAACGGTGACATTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTGCGCATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCTATAGTCTGTGAGTTTTTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATCGATCTTGAACCGGGCACACGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGTAGAGTTAAGAGAGTTAAAGGCCCAACTTCAAGAGTTGTTGAGCAAAGGTTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGATTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTAGAATGTGCATAGACTACAGACAACTGAACAAGGTAACTATTAAGAACAAGTATCCTCTTCCTCGCATTGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581303" ref_strand="+" ref_description="SGN-U581303 Tomato 200607#2 [14 ESTs aligned] (*GB) gi|113205316|gb|ABI34339.1| (e_value=2e-69) Polyprotein,; ">
      <seq>cacgaataggcatatcaagaaattcacaatgtaaatttagaccattagcaaatgaggaagatacataagaaaacgtggatccaggatcaaacaatacagaagccatgcaatcacaaaccagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgttcgtctgtccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtctgggacaatttctcctaatatgtccaatctccccacatccataacattctctggagtcaatcataggcccctcggagaagtgttgaccggtctgaggtggtcccccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagaaccattaaactcacctccctttcgaagcctttttgatgtcgatgttgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaaggccgaaatccgcaattctgacctcaaccccttcacaaaccggcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaaccgacatcctaccttgctctaggctcaagaactcatcccttttcctatccctcaaagtccgggggatatacttctccataaacaaactagagaatgaggcccaagtcataggtggtgcctctattggttgacactcgatatgtgaccgccaccacattttggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattataggcccagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcctgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgttcagtttccccatcctccccttctcttattacttcctcagtcggtggaggagtcactgccctagtatcagatgggctaggtgctcgtcctcttcctctagaggacgtcctcccacgacctctaccacggccccttgccgctgttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="70016" stop="67909"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69716" g_stop="68208" g_length="1509"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1508" r_length="1508" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-U581303" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>1509</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U581303" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69716" e_stop="68208"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACGAATAGGCATGTCAAGCAAATTCACAATGTAAATCAAGACCATTAGCAAATGCGGAAGATACATATGAAAATGTAGAGCCAGGGTCAAACAATACAAAATCCATGCAATCACAAACCGAAAGATTACCTGTGATAACAGCATCTGATGTTTCCGCTTCTGACCGCCCGGGGAAAGCGTAACAATGGGCCCTCTCACCTGTCTGTCCGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGCTTGCCCATCACCCCGACCGTTTTGGTGGCCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTTCCATAACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTGGACAATACTTCTTAATGTGTCCAGTCTCCCCACATCCATAACACTCTCTAGATTCGAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGGGGAGCCCCAACTACAGTTTGTAGTGAAGACTGAATGGGTCGAACTGAGTAACCTCCGGAGCCCTGTCCTCTCGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTATCACGAAGTCTACCACTTCTTGAAAAGATTTCGCTGTAGCCGCTACCTGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCCCTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATACCTTGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGACTCAGCACCCTTGAAGACTGAAGGTTTCAATTTCAAGAACTTACTGAAAATTTCATGCTGATCATTTGTCATTACAGGCCCTGTAGTCAGACGAGGAAATGTGCCTATTTCCAATGAGGCATCCATGCGGGGAGCCATAGTGGCTGCATGTTGTACCTCTGAAACCGGAGGTGTTGGTGCAGAAAACACTGGAGGTGCCTGACCTTGATCAGACAACCCACTAAGATAAGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATCCCTCATTCTGCACTTGTTCATTTTCCCCATCCTCCCCTTCTCTTATTACTTCTTCAGTCGGTGGAGGAGTCACCGCCCCAGTATCAGATGGGCTAGGTGCTCGTCCTCTTCCTCTAGAGAACGTCCTCCCACGACCTCTACCACGGCCTCTTGCCGCTGCTCTT</genome_strand>
        <mrna_strand>CACGAATAGGCATATCAAG-AAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAACGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTGTCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCTGGGACAATTTCTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCAATCATAGGCCCCTCGGAGAAGTGTTGACCGGTCTGAGGTGGTCCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGAACCATTAAACTCACCTCCCTTTCGAAGCCTTTTTGATGTCGATGTTGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCCTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCTCTTATTACTTCCTCAGTCGGTGGAGGAGTCACTGCCCTAGTATCAGATGGGCTAGGTGCTCGTCCTCTTCCTCTAGAGGACGTCCTCCCACGACCTCTACCACGGCCCCTTGCCGCTGTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577296" ref_strand="+" ref_description="SGN-U577296 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|113205316|gb|ABI34339.1| (e_value=2e-54) Polyprotein,; ">
      <seq>aagaacaacggtaagaggccgtggtagaggtcgtgggaggacgtcctctaggggaagaggacgagcacctagcccatctgatactagggcagtgactcctccaccgactgaggagataataagagaaggggaggatggggaaactgaacaagtgcaaaacgaggaaatgccaccccaacctaccccagagatgatcaatcaggttctggcttatcttagcgggttgtctgatcagggccagacacccccagtgttttctgcaccagcacctcaggctccggaggtacaacatgcggctactatggctccccacatggatgttccattggaaataggcacgtttccacgtctgactactgggcctataatgacaaatgatcagcatgaacttttcagtaagttcttgaaattgaaacctccagtcttcaagggtgcagaatctgaggatgcttacgattttctggttgactgtcatgagctactacacaagatgggtatagtcaaacggtttggtgttgagttcgtgagttatcagtttcaagggaacgccaaaatgtggtggcggtcacatattgagtgtcaaccaacagaggcaccacctatgacttggacctcattctctagcttttttatggagaagtatatcccccggactttgagggataggaaaagggatgagttcctgagcctagagcaaggtaggatgtcggttaatgcttatgaagctaagttccgtgcactatccagatatgccacccaactatgtttcagtccacaagagcggattcgccgttttgtgaaggggttgaggtcagagttgtggatttcagccttatagatagcggctactgcaaaatccttccaagaggtggtatatttcgtggtagaggtggaaggagtgaagccagatgacttcaccacgacatcgacatcaaagaggtttcgtaagggaggtgagtttaagggttcttactctagaggacaaggttccggaggttactcagttcgaccatttcaatcttcactacagaccgtagttgggggtccacctcagaccggtcaacacttctccgagagacctatgcttgactccagagagtgttatgggtgtggggagactgggcatattaagagaaattgtccaaaacagagttatagacccccaatggctagaggtagaggtggtcatggtagaggccgtcattctggaggccgtggtggtcgacccacgggtggtcaccaagacggccgaggtgatgggcaaactggagccactacatcacaacatggtaggggcaacagacagacgaacgatatggcccattgttacgctttccctgggcggtttgaagcggaggcatctgatgctgtcatcacaggtaatcttctggtttgtgattgcacggcttctgtattttttgatcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="67908" stop="69933"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68208" g_stop="69633" g_length="1426"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1426" r_length="1426" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-U577296" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>1426</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U577296" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68208" e_stop="69633"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGCAGCGGCAAGAGGCCGTGGTAGAGGTCGTGGGAGGACGTTCTCTAGAGGAAGAGGACGAGCACCTAGCCCATCTGATACTGGGGCGGTGACTCCTCCACCGACTGAAGAAGTAATAAGAGAAGGGGAGGATGGGGAAAATGAACAAGTGCAGAATGAGGGATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATCAAGGTCAGGCACCTCCAGTGTTTTCTGCACCAACACCTCCGGTTTCAGAGGTACAACATGCAGCCACTATGGCTCCCCGCATGGATGCCTCATTGGAAATAGGCACATTTCCTCGTCTGACTACAGGGCCTGTAATGACAAATGATCAGCATGAAATTTTCAGTAAGTTCTTGAAATTGAAACCTTCAGTCTTCAAGGGTGCTGAGTCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAATAGAGGCACCACCTATGACTTGGGCCTCATTCTCTAGTTTGTTTATGGAGAAGTATATCCCCCGGACTTTGAGGGATAGGAAAAGGGATGAGTTCTTGAGCCTAGAGCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCAAGGTATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAGGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACAGCGAAATCTTTTCAAGAAGTGGTAGACTTCGTGATAGAGGTGGAAGGAGTGAAGCCAGATGAATTCACCATGGCATCGACATCAAAGAGGTTTCGAAAGGGAGGTGAGTTTAATGGTTCTTACTCGAGAGGACAGGGCTCCGGAGGTTACTCAGTTCGACCCATTCAGTCTTCACTACAAACTGTAGTTGGGGCTCCCCCTCAGACCGGTCAACACTTCTCTGAGAGACCTATGCTCGAATCTAGAGAGTGTTATGGATGTGGGGAGACTGGACACATTAAGAAGTATTGTCCAAAACAGAGTTACAGACCTCCAAATGTTAGAGGTAGAGGTGGTTATGGAAGAGGCCGTTATTCTGGAGGACGTGGTGGTCGAGGTAATGGTGGCCACCAAAACGGTCGGGGTGATGGGCAAGCTGGAGCCACTACATCACAACATGGTAGGGGCAACGGACAGACAGGTGAGAGGGCCCATTGTTACGCTTTCCCCGGGCGGTCAGAAGCGGAAACATCAGATGCTGTTATCACAGGTAATCTTTCGGTTTGTGATTGCATGGATTTTGTATTGTTTGACCCT</genome_strand>
        <mrna_strand>AAGAACAACGGTAAGAGGCCGTGGTAGAGGTCGTGGGAGGACGTCCTCTAGGGGAAGAGGACGAGCACCTAGCCCATCTGATACTAGGGCAGTGACTCCTCCACCGACTGAGGAGATAATAAGAGAAGGGGAGGATGGGGAAACTGAACAAGTGCAAAACGAGGAAATGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTGGCTTATCTTAGCGGGTTGTCTGATCAGGGCCAGACACCCCCAGTGTTTTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGGCTACTATGGCTCCCCACATGGATGTTCCATTGGAAATAGGCACGTTTCCACGTCTGACTACTGGGCCTATAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCAGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTCAAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATATTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGACCTCATTCTCTAGCTTTTTTATGGAGAAGTATATCCCCCGGACTTTGAGGGATAGGAAAAGGGATGAGTTCCTGAGCCTAGAGCAAGGTAGGATGTCGGTTAATGCTTATGAAGCTAAGTTCCGTGCACTATCCAGATATGCCACCCAACTATGTTTCAGTCCACAAGAGCGGATTCGCCGTTTTGTGAAGGGGTTGAGGTCAGAGTTGTGGATTTCAGCCTTATAGATAGCGGCTACTGCAAAATCCTTCCAAGAGGTGGTATATTTCGTGGTAGAGGTGGAAGGAGTGAAGCCAGATGACTTCACCACGACATCGACATCAAAGAGGTTTCGTAAGGGAGGTGAGTTTAAGGGTTCTTACTCTAGAGGACAAGGTTCCGGAGGTTACTCAGTTCGACCATTTCAATCTTCACTACAGACCGTAGTTGGGGGTCCACCTCAGACCGGTCAACACTTCTCCGAGAGACCTATGCTTGACTCCAGAGAGTGTTATGGGTGTGGGGAGACTGGGCATATTAAGAGAAATTGTCCAAAACAGAGTTATAGACCCCCAATGGCTAGAGGTAGAGGTGGTCATGGTAGAGGCCGTCATTCTGGAGGCCGTGGTGGTCGACCCACGGGTGGTCACCAAGACGGCCGAGGTGATGGGCAAACTGGAGCCACTACATCACAACATGGTAGGGGCAACAGACAGACGAACGATATGGCCCATTGTTACGCTTTCCCTGGGCGGTTTGAAGCGGAGGCATCTGATGCTGTCATCACAGGTAATCTTCTGGTTTGTGATTGCACGGCTTCTGTATTTTTTGATCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590682" ref_strand="+" ref_description="SGN-U590682 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|113205316|gb|ABI34339.1| (e_value=4e-28) Polyprotein,; ">
      <seq>ccgtggtagaggtcgtgggaggacgtcctctaggggaagaggacgagcacctagcccatctgatactagggcggtgactcctccacctactgaagaagtaataagagaaggggaagatggggagaatgaacaagtgcaaaatgaggaattgccaccccagcctaccccagagatgataaatcaggtgctagcttatctgagtaggttgtctaatcaaggtcaagcacctccagtgtcttctgcaccaacacctccggtttcagaggtacaacatgcagccactatggctcctcgtatggatgcctcattagatataggcacgtttccaagtctgactactgggcctataatgacaaatgatcagcatgaacttttcagtaagttcttgaaattgaaacctccagtcttcaagggtgcggaatctgaggatgcttacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggttcggtgttgagttcgtgagttatcaatttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacctatgacttgggcctcattttctagtttgnttatggagaagtatatcccccggactttgaggganaggaaaagggatgagtttttgagcctagagcaaggtannatgtcggtcaatgcatangangctaagtttcgtgcactatccnnatntgccactcaactttgtttcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="67926" stop="69251"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68226" g_stop="68978" g_length="753"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="753" r_length="753" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-U590682" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>753</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U590682" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68226" e_stop="68978"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGTGGTAGAGGTCGTGGGAGGACGTTCTCTAGAGGAAGAGGACGAGCACCTAGCCCATCTGATACTGGGGCGGTGACTCCTCCACCGACTGAAGAAGTAATAAGAGAAGGGGAGGATGGGGAAAATGAACAAGTGCAGAATGAGGGATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATCAAGGTCAGGCACCTCCAGTGTTTTCTGCACCAACACCTCCGGTTTCAGAGGTACAACATGCAGCCACTATGGCTCCCCGCATGGATGCCTCATTGGAAATAGGCACATTTCCTCGTCTGACTACAGGGCCTGTAATGACAAATGATCAGCATGAAATTTTCAGTAAGTTCTTGAAATTGAAACCTTCAGTCTTCAAGGGTGCTGAGTCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAATAGAGGCACCACCTATGACTTGGGCCTCATTCTCTAGTTTGTTTATGGAGAAGTATATCCCCCGGACTTTGAGGGATAGGAAAAGGGATGAGTTCTTGAGCCTAGAGCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCAAGGTATGCCACCCAACTTTGTTTCAG</genome_strand>
        <mrna_strand>CCGTGGTAGAGGTCGTGGGAGGACGTCCTCTAGGGGAAGAGGACGAGCACCTAGCCCATCTGATACTAGGGCGGTGACTCCTCCACCTACTGAAGAAGTAATAAGAGAAGGGGAAGATGGGGAGAATGAACAAGTGCAAAATGAGGAATTGCCACCCCAGCCTACCCCAGAGATGATAAATCAGGTGCTAGCTTATCTGAGTAGGTTGTCTAATCAAGGTCAAGCACCTCCAGTGTCTTCTGCACCAACACCTCCGGTTTCAGAGGTACAACATGCAGCCACTATGGCTCCTCGTATGGATGCCTCATTAGATATAGGCACGTTTCCAAGTCTGACTACTGGGCCTATAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCGGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTCGGTGTTGAGTTCGTGAGTTATCAATTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCCTCATTTTCTAGTTTGNTTATGGAGAAGTATATCCCCCGGACTTTGAGGGANAGGAAAAGGGATGAGTTTTTGAGCCTAGAGCAAGGTANNATGTCGGTCAATGCATANGANGCTAAGTTTCGTGCACTATCCNNATNTGCCACTCAACTTTGTTTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U579265" ref_strand="+" ref_description="SGN-U579265 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|86371679|gb|ABC94893.1| (e_value=8e-76) polyprotein; (*SWP) sp|Q99315|YG31B_YEAST (e_value=3e-38) Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-G; ">
      <seq>ccgtgggaggacgtcctcaagaagaagaggacaaacacctagcccatttgatgctagggcggtgactcctccaccgactgaggaagtagtaagagagggtgaggaaggggagaatgaacaagtgcaaaatgaggaattgccaccccaacctaccccagagatgatcaatcaggttctcgcttatcttagtgggttgtctgattagggtcaggcacctctagtgttttctacaccagcacctcagggtccgaaggtacaacatgcggctattgtggctccccgcatggatgccttatcggacataggcacgtttccacatctgattactgggcctataatgataaatgatcagcgtgaaattttcagtaagttcttaaaatttaaacctccagtcttcaagggtgctgaatctgaggatgcttacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagttcgtgagttatgagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacctatgacttgggcatcattctctagcttgtttatggagaagtatatccccccaactttgagggataggaaaagagatgagttcttgagcctagagcaaggtaggatgtcggttactgcatatgaggctaagtttcgtgcattatcaaggtatgccacccaactttgtttcagtccacaagagcggattcgccgttttgtgaaggggttgagatcagagttgcggatttcagccttacaggtagcggctacagcgaaatcctttcaagaagtggtggacttcgtgatagaggtagagggagtgaaaagcccaacttcaagagttgttgagcaaaggcttcattagaccaagtgcatctccttggggtgctccagttttgtttgtgaagaagaaggatgggagttttcggatgtgcatagactaccggcagttgaacaaggtaatcataaagaacaagtatcctcttcctcgcattgatgacttgttcgatcagttacaaggtgcttgtgtcttcactaagattgacttgagatccggttgtcatcaattgaaaatacgggcaacggatgtgccaaagactgcttttagaaccaggtatgggcattacgaatttgtagtgatgtcttttggtcttacgaatgcccctgctgcgttcatgagtttgatgaacgggattttaagccatatttggatctctttgtgatcgtatttattgatgatatactgatatactctaaaagtaaggaggaacatgaggagcatttgagaatggtattggaaatgttgagggagaaaaagctttatgccaagttctctaagtgttagttttggctagatgcagtgtccttcttggggcacgtggtttcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="67939" stop="71090"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68238" g_stop="69110" g_length="873"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="873" r_length="873" r_score="0.928"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69111" i_stop="70226" i_length="1116">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70227" g_stop="70790" g_length="564"/>
          <reference_exon_boundary r_type="cDNA" r_start="874" r_stop="1436" r_length="563" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-U579265" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>1437</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U579265" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68238" e_stop="69110"/>
          <exon e_start="70227" e_stop="70790"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTGGGAGGACGTTCTCTAGAGGAAGAGGACGAGCACCTAGCCCATCTGATACTGGGGCGGTGACTCCTCCACCGACTGAAGAAGTAATAAGAGAAGGGGAGGATGGGGAAAATGAACAAGTGCAGAATGAGGGATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATCAAGGTCAGGCACCTCCAGTGTTTTCTGCACCAACACCTCCGGTTTCAGAGGTACAACATGCAGCCACTATGGCTCCCCGCATGGATGCCTCATTGGAAATAGGCACATTTCCTCGTCTGACTACAGGGCCTGTAATGACAAATGATCAGCATGAAATTTTCAGTAAGTTCTTGAAATTGAAACCTTCAGTCTTCAAGGGTGCTGAGTCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAATAGAGGCACCACCTATGACTTGGGCCTCATTCTCTAGTTTGTTTATGGAGAAGTATATCCCCCGGACTTTGAGGGATAGGAAAAGGGATGAGTTCTTGAGCCTAGAGCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCAAGGTATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAGGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACAGCGAAATCTTTTCAAGAAGTGGTAGACTTCGTGATAGAGGTGGAAGGAGTGAAGCCAGATGAATTCACCATGGCATCGACATCAAAGAGGTTTCGAAAGGGAGGTGAGTTTAATGGTTCTTACTCGAGAGGACAGGGCTCCGGAGGTTACTCAGTTCGACCCATTCAGTCTTCACTACAAACTGTAGTTGGGGCTCCCCCTCAGACCGGTCAACACTTCTCTGAGAGACCTATGCTCGAATCTAGAGAGTGTTATGGATGTGGGGAGACTGGACACATTAAGAAGTATTGTCCAAAACAGAGTTACAGACCTCCAAATGTTAGAGGTAGAGGTGGTTATGGAAGAGGCCGTTATTCTGGAGGACGTGGTGGTCGAGGTAATGGTGGCCACCAAAACGGTCGGGGTGATGGGCAAGCTGGAGCCACTACATCACAACATGGTAGGGGCAACGGACAGACAGGTGAGAGGGCCCATTGTTACGCTTTCCCCGGGCGGTCAGAAGCGGAAACATCAGATGCTGTTATCACAGGTAATCTTTCGGTTTGTGATTGCATGGATTTTGTATTGTTTGACCCTGGCTCTACATTTTCATATGTATCTTCCGCATTTGCTAATGGTCTTGATTTACATTGTGAATTTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAAGGTGTATAGGTCTTGTCTTGTAACTTTTATGGGGAGCAATACTCATGTAGAGTTGGTTATCTTAGAAATGGTTGACTTCGATGTAATTCTGGGCATGACTTGGCTTTCTCCAAATTTTGCGATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTTCGTATCATCTCCTTTCTTCGTTCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATTGACCTTAAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCTGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGATTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTCGAATGTGCATAGACTACAGACAACTAAACAAGGTAACCATAAAGAACAAGTATCCTCTTCCTCGCATTGATGACTTGTTCGATCAGTTACAAGGAGCTTGTGTCTTCTCTAAGATTGACTTGAGATCCGGTTATCATCAATTGAAAATACGGGCAACGGATGTGCCAAAGACTGCTTTTAGAACCAGGTATGGGTATTACGAATTTGTAGTGATGTCTTTTGGTCTTACGAATGCCCCTGCTGCGTTCATGAGTTTGATGAACGGGATTTTTAAGCTATATCTGGATCTATTTGTGATCGTATTTATTGATGATATATTGGTATACTCAAAGATCAAGAAGGAACATGAGGAGCATTTGAGAATGGTATTGGAAATGTTGAGGGAGAAAAAGCTTTATGCCAAGTTCTCTAAGTGTGAGTTTTGGCTAGATGCAGTGTCCTTCTTGGGGCACGTGGTTTCTA</genome_strand>
        <mrna_strand>CCGTGGGAGGACGTCCTCAAGAAGAAGAGGACAAACACCTAGCCCATTTGATGCTAGGGCGGTGACTCCTCCACCGACTGAGGAAGTAGTAAGAGAGGGTGAGGAAGGGGAGAATGAACAAGTGCAAAATGAGGAATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATTAGGGTCAGGCACCTCTAGTGTTTTCTACACCAGCACCTCAGGGTCCGAAGGTACAACATGCGGCTATTGTGGCTCCCCGCATGGATGCCTTATCGGACATAGGCACGTTTCCACATCTGATTACTGGGCCTATAATGATAAATGATCAGCGTGAAATTTTCAGTAAGTTCTTAAAATTTAAACCTCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATGAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCATCATTCTCTAGCTTGTTTATGGAGAAGTATATCCCCCCAACTTTGAGGGATAGGAAAAGAGATGAGTTCTTGAGCCTAGAGCAAGGTAGGATGTCGGTTACTGCATATGAGGCTAAGTTTCGTGCATTATCAAGGTATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGCCGTTTTGTGAAGGGGTTGAGATCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACAGCGAAATCCTTTCAAGAAGTGGTGGACTTCGTGATAGAGGTAGAGGGAGTGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCCAACTTCAAGAGTTGTTGAGCAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCAGTTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTCGGATGTGCATAGACTACCGGCAGTTGAACAAGGTAATCATAAAGAACAAGTATCCTCTTCCTCGCATTGATGACTTGTTCGATCAGTTACAAGGTGCTTGTGTCTTCACTAAGATTGACTTGAGATCCGGTTGTCATCAATTGAAAATACGGGCAACGGATGTGCCAAAGACTGCTTTTAGAACCAGGTATGGGCATTACGAATTTGTAGTGATGTCTTTTGGTCTTACGAATGCCCCTGCTGCGTTCATGAGTTTGATGAACGGGA-TTTTAAGCCATATTTGGATCTCTTTGTGATCGTATTTATTGATGATATACTGATATACTCTAAAAGTAAGGAGGAACATGAGGAGCATTTGAGAATGGTATTGGAAATGTTGAGGGAGAAAAAGCTTTATGCCAAGTTCTCTAAGTGTTAGTTTTGGCTAGATGCAGTGTCCTTCTTGGGGCACGTGGTTTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590648" ref_strand="+" ref_description="SGN-U590648 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|113205316|gb|ABI34339.1| (e_value=2e-17) Polyprotein,; ">
      <seq>gcacctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="67972" stop="69127"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68272" g_stop="68827" g_length="556"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="556" r_length="556" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-U590648" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U590648" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68272" e_stop="68827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCACCTAGCCCATCTGATACTGGGGCGGTGACTCCTCCACCGACTGAAGAAGTAATAAGAGAAGGGGAGGATGGGGAAAATGAACAAGTGCAGAATGAGGGATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATCAAGGTCAGGCACCTCCAGTGTTTTCTGCACCAACACCTCCGGTTTCAGAGGTACAACATGCAGCCACTATGGCTCCCCGCATGGATGCCTCATTGGAAATAGGCACATTTCCTCGTCTGACTACAGGGCCTGTAATGACAAATGATCAGCATGAAATTTTCAGTAAGTTCTTGAAATTGAAACCTTCAGTCTTCAAGGGTGCTGAGTCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAATAGAGGCACCACCTATGACTTGGGCCTCATTCT</genome_strand>
        <mrna_strand>GCACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U592109" ref_strand="-" ref_description="SGN-U592109 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|113205363|gb|AAT66771.2| (e_value=5e-59) Putative; ">
      <seq>ggaaaagggatgagttcttgancctatagcaaggtaggatgtaggtcaatgcatatgaggctaagtttcgtgcactatccagatatgccactcaactttgtttcagtccacaagagaggattcgtcgttttgtgaaagggttgaggtcagagttgcggatttcagcgttacaggtagcggctacggcaaaatccttgcaagaaatggttgacttcgatgtaattctgggtatgacttggctttctccaaattttgcaatcttggattgtaatgctaaaaccgtgacgttagccaagcctgggacagatctgttagtgtaggagggtgactacacttccaatccggtgcgtatcatctcctttcttcgtgctaagaaaatggttagtaaagggtgtttagctttcttggcacatctcaaggataacactacccaagtaccttcgattgactcagtttcagtagttcgtgagtttatggatgtgttccctgcagatcatcctggtatgccaccggatagggatattgacttctgtattgatctcgaaccgggcacacgccccatttttatacccccttatagaatggctcccgcagagttaagagagttaaaggcacaacttcaagagttattgaacaaaggcttcattagaccaagtgcatctccttggggtgctccggttttgttgtaaagatcggcagtttttgaatgtgcatagactacag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="68573" stop="86942"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68873" g_stop="69073" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="201" r_length="201" r_score="0.930"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69074" i_stop="69818" i_length="745">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69819" g_stop="70347" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="723" r_length="522" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-U592109" ref_strand="-">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U592109" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="68873" e_stop="69073"/>
          <exon e_start="69819" e_stop="70347"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAAGGGATGAGTTCTTGAGCCTAGAGCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCAAGGTATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAGGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACAGCGAAATCTTTTCAAGAAGTGGTAGACTTCGTGATAGAGGTGGAAGGAGTGAAGCCAGATGAATTCACCATGGCATCGACATCAAAGAGGTTTCGAAAGGGAGGTGAGTTTAATGGTTCTTACTCGAGAGGACAGGGCTCCGGAGGTTACTCAGTTCGACCCATTCAGTCTTCACTACAAACTGTAGTTGGGGCTCCCCCTCAGACCGGTCAACACTTCTCTGAGAGACCTATGCTCGAATCTAGAGAGTGTTATGGATGTGGGGAGACTGGACACATTAAGAAGTATTGTCCAAAACAGAGTTACAGACCTCCAAATGTTAGAGGTAGAGGTGGTTATGGAAGAGGCCGTTATTCTGGAGGACGTGGTGGTCGAGGTAATGGTGGCCACCAAAACGGTCGGGGTGATGGGCAAGCTGGAGCCACTACATCACAACATGGTAGGGGCAACGGACAGACAGGTGAGAGGGCCCATTGTTACGCTTTCCCCGGGCGGTCAGAAGCGGAAACATCAGATGCTGTTATCACAGGTAATCTTTCGGTTTGTGATTGCATGGATTTTGTATTGTTTGACCCTGGCTCTACATTTTCATATGTATCTTCCGCATTTGCTAATGGTCTTGATTTACATTGTGAATTTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAAGGTGTATAGGTCTTGTCTTGTAACTTTTATGGGGAGCAATACTCATGTAGAGTTGGTTATCTTAGAAATGGTTGACTTCGATGTAATTCTGGGCATGACTTGGCTTTCTCCAAATTTTGCGATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTTCGTATCATCTCCTTTCTTCGTTCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATTGACCTTAAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCTGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGATTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTCGAATGTGCATAGACTACAG</genome_strand>
        <mrna_strand>GGAAAAGGGATGAGTTCTTGANCCTATAGCAAGGTAGGATGTAGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGAGGATTCGTCGTTTTGTGAAAGGGTTGAGGTCAGAGTTGCGGATTTCAGCGTTACAGGTAGCGGCTACGGCAAAATCCTTGCAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACCGTGACGTTAGCCAAGCCTGGGACAGATCTGTTAGTGTAGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATAACACTACCCAAGTACCTTCGATTGACTCAGTTTCAGTAGTTCGTGAGTTTATGGATGTGTTCCCTGCAGATCATCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTTTATACCCCCTTATAGAATGGCTCCCGCAGAGTTAAGAGAGTTAAAGGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTG-TTGT--A-AAG-A--TCGGCAGTTTTTGAATGTGCATAGACTACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591718" ref_strand="+" ref_description="SGN-U591718 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|48057631|gb|AAT39954.1| (e_value=1e-28) putative integrase [Solanum demissum]; ">
      <seq>gggatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="70227" stop="69302"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69928" g_stop="69602" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="326" r_length="326" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-U591718" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>327</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U591718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69928" e_stop="69602"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATGCCCAGAATTACATCGAAGTCAACCATTTCTAAGATAACCAACTCTACATGAGTATTGCTCCCCATAAAAGTTACAAGACAAGACCTATACACCTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAAATTCACAATGTAAATCAAGACCATTAGCAAATGCGGAAGATACATATGAAAATGTAGAGCCAGGGTCAAACAATACAAAATCCATGCAATCAC</genome_strand>
        <mrna_strand>GGGATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGC-AATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U592023" ref_strand="+" ref_description="SGN-U592023 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|113205363|gb|AAT66771.2| (e_value=2e-56) Putative; ">
      <seq>ttacttcggcacgaggatttgatcctgcctccacattttcatatgtatcttcctcatttgctactgttcttaatttacatagtgaatcgcttgacatacctattcgtgttctactccggtgggtgagtctgtgattgttgaaaaggtgtataggtcttgtcttgtgacatttgtgggagcaatactcatgtagacttggttatcctataaatggttgacttcgatgtaattctgggtatgacttggctgtctccaaattttgcaatcttggattgtaatgctaaaactgtaacgttggccaagcctgagatagatgcgttagtgtgggagggtgactacacttccactccagttcgtatcatctcctttctttgtgctaagagaatggttagtaaagggtgtttagctttcttggcacacctcagggatgatactacccaagtaccttcaattgagtcagtttcgatagtccgtgagtttctggatgtgtttcctgcagaccttcctggtatgccaccggatagggatattgacttttgcattgatctggagccgggtgatcaccccatttccatacccccttatagaatggctcccgctgagttgggggagttaaaggcccaacttcaagagttgttangtaagggcttcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="69325" stop="70548"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69631" g_stop="70264" g_length="634"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="654" r_length="631" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-U592023" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U592023" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69631" e_stop="70264"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGGCTCTACATTTTCATATGTATCTTCCGCATTTGCTAATGGTCTTGATTTACATTGTGAATTTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAAGGTGTATAGGTCTTGTCTTGTAACTTTTATGGGGAGCAATACTCATGTAGAGTTGGTTATCTTAGAAATGGTTGACTTCGATGTAATTCTGGGCATGACTTGGCTTTCTCCAAATTTTGCGATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTTCGTATCATCTCCTTTCTTCGTTCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATTGACCTTAAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCTGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAACAAAGGCTTCATT</genome_strand>
        <mrna_strand>CCTGCCTCCACATTTTCATATGTATCTTCCTCATTTGCTACTGTTCTTAATTTACATAGTGAA-TCGCTTGACATACCTATTCGTGTT-CTACTCCGGTGGGTGAGTCTGTGATTGTTGAAAAGGTGTATAGGTCTTGTCTTGTGACATTTGT-GGGAGCAATACTCATGTAGACTTGGTTATCCTATAAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTGTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTAACGTTGGCCAAGCCTGAGATAGATGCGTTAGTGTGGGAGGGTGACTACACTTCCACTCCAGTTCGTATCATCTCCTTTCTTTGTGCTAAGAGAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACACCTCAGGGATGATACTACCCAAGTACCTTCAATTGAGTCAGTTTCGATAGTCCGTGAGTTTCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGGGATATTGACTTTTGCATTGATCTGGAGCCGGGTGATCACCCCATTTCCATACCCCCTTATAGAATGGCTCCCGCTGAGTTGGGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTANGTAAGGGCTTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U579150" ref_strand="+" ref_description="SGN-U579150 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|113205316|gb|ABI34339.1| (e_value=9e-121) Polyprotein,; (*ATH) ATMG00860.1 (e_value=3e-15) | Symbol: ORF158 | hypothetical protein | chrM:235916-236392 FORWARD | Aliases: ORF158; (*SWP) sp|Q99315|YG31B_YEAST (e_value=3e-49) Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-G; ">
      <seq>gcggccgctctatattagntggacccgcgggctgcaggaattcggcacgaggagaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagactttgctcaaaaactcttgaaagtgggcctttaactctcttaactccgcgggagccattctataagggggtatagaaatggggcgagtgcccgtttcaagatcgaagcagaagtcaatatccctttctggtggcataccggggagatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="71223" stop="69807"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70919" g_stop="70107" g_length="813"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="865" r_length="813" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-U579150" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>813</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U579150" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70919" e_stop="70107"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTTCTTGATCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAATAGATCCAGATATAGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATACCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCTCCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATGCACATTCGAAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCAGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTTAAGGTCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTG</genome_strand>
        <mrna_strand>AGAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGACTTTGCTCAAAAACTCTTGAAAGTGGGCCTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTGCCCGTTTCAAGATCGAAGCAGAAGTCAATATCCCTTTCTGGTGGCATACCGGGGAGATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575264" ref_strand="+" ref_description="SGN-U575264 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|113205363|gb|AAT66771.2| (e_value=2e-67) Putative; (*SWP) sp|Q9UR07|RT23_SCHPO (e_value=5e-21) Retrotransposable element Tf2 155 kDa protein type 3 OS=Schizosaccharomyces pombe GN=Tf2-11; ">
      <seq>acccaattccgcatgcaatgttttccaaaacttagaagtaaactgcatacctctatctgatatgatggagagtggaaccccatgcaaccgaacaatttctgagacatatattttggctaacttctctgcattgtaagtcaccttgaccggaatgaaatgagcagacttagttaacctatcaacaatcacccaaatagagtcatacttactcattgtctttggaaggccaactacaaaatccattgcaattctctcccacttccattcaggaatgagcattctctgaagtgttcctccaggcctctggtgttcatactttacttgttgacagtttggacatttggcaataaagtcaacaatatcacgcttcattctactccaccaaaagtgttgctttaggtcacggtacatcttggttgcacccggatgtatagaataccttgaactatgagcctctgtcagaatagtgttgatcaaatcatcaactcggggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="72482" stop="71392"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72182" g_stop="71692" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="493" r_length="493" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-U575264" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U575264" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72182" e_stop="71692"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCCAATTCCGCATGCAATGTTTTCCAAAACTTAGAAGTAAACTGCGTACCTCTATCTGATATGATGAAGAGCAGAACCCCATGCAATTGAACGATTTCTGAGATATAGATCTTGGCTAACTTCTCGGCATTGTAAGTCACCTTAACCGGAATGAAATGAGCAGACTTAGTTAACCTATCAACAATCACCCAAATAGAGTCGTACTTACTCATCGTCTTTGGAAGACCAACCACGAAGTCCATTGCGATTCTCTCCCATTTCCATTCTGGAATGCGCATTCTCTGAAGTGTTCCTCCGGGCCTCTGGTGTTCATACTTTACTTGCTGACAATTTGGACATTTGGCAACAAAATCAACAATGTCGCGCTTCATTCTACTCCACCAAAAGTGTTGCTTTAGGTCACGG--CATCTTGGTTGCACCAGGATGTATAGAATATCTGGAACTATGAGCCTCTGTAAGAATAGTGTAAATCAAATCATCAACGCGGGGT</genome_strand>
        <mrna_strand>ACCCAATTCCGCATGCAATGTTTTCCAAAACTTAGAAGTAAACTGCATACCTCTATCTGATATGATGGAGAGTGGAACCCCATGCAACCGAACAATTTCTGAGACATATATTTTGGCTAACTTCTCTGCATTGTAAGTCACCTTGACCGGAATGAAATGAGCAGACTTAGTTAACCTATCAACAATCACCCAAATAGAGTCATACTTACTCATTGTCTTTGGAAGGCCAACTACAAAATCCATTGCAATTCTCTCCCACTTCCATTCAGGAATGAGCATTCTCTGAAGTGTTCCTCCAGGCCTCTGGTGTTCATACTTTACTTGTTGACAGTTTGGACATTTGGCAATAAAGTCAACAATATCACGCTTCATTCTACTCCACCAAAAGTGTTGCTTTAGGTCACGGTACATCTTGGTTGCACCCGGATGTATAGAATACCTTGAACTATGAGCCTCTGTCAGAATAGTGTTGATCAAATCATCAACTCGGGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U599718" ref_strand="+" ref_description="SGN-U599718 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|113205427|gb|ABI34389.1| (e_value=5e-23) Polyprotein,; ">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="72697" stop="71920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72397" g_stop="72221" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-U599718" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U599718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72397" e_stop="72221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAAGAAGTTATCCCAATGGCCACCAAATTCTATCACACACACATGAAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575864" ref_strand="+" ref_description="SGN-U575864 Tomato 200607#2 [38 ESTs aligned] (*GB) gi|33337947|gb|AAQ13595.1| (e_value=0) putative squalene epoxidase [Lycopersicon esculentum]; (*ATH) AT4G37760.1 (e_value=0) | Symbol: None | squalene monooxygenase, putative / squalene epoxidase, putative, similar to SP:O65404 (SE 1,1), SP:O65402 (SE 1,2), SP:O65403 (SE 2) | chr4:17743881-17746672 FORWARD | Aliases: T28I19.40, T28I19_40; (*SWP) sp|O48651|ERG1_PANGI (e_value=0) Squalene monooxygenase OS=Panax ginseng; ">
      <seq>gtttttttttattgtcatcctcgcaattttcacccaaaatcacacggtccaattggatccccaatttcggattgcgatgcttcttataaatacaaacaatttctaccatgctttctccctcgttttctccaaacacaaatttcctctatctgcagcctctcctccaccacccaaatcatcattttctcaggcctctgattcaattacaaagaacaaattgaagttacctttggtttctttgaccaaatctttgccaaatacacaatttgatcttattcagagcgagaaaatggtgaatttcatgatggataagtatattgttcccagttttgttgtttctctattggggttccttcttctttatgttttgcgaccaagaacccccaattataagaaaatggatcttaaatctacccgaaaatgtgaaacccacaacgtaatttctagaaaattggagaaagggaccgatgccgatgttataattgttggagctggggttgctggtgctgctcttgctcatacccttgctaaggaaggacgaaatgttcacgtcatcgaaagggatttgacagagccggaccggattgttggcgaattgcttcagcctgggggttatcttaaattgattgagttgggcattgaagattgtgttgaggatattgatgcccagcgggtggttggatatgctcttttcaaggatggaaagagcacaaatgtttcctatcccttgaaaaacttccattcggatgtggctgggagaagctttcacaatgggcgcttcatacagaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggaaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatggcaaattatttgaaaactatggtagctccccaggtaccacctgagctacgtgatgcgtttctatctgcaattgataaggggcatattaaaactatgccaaacaggagcatgccagctgctccctatcctacacctggagctctgttgctaggcgattctttcaacatgcgccatccattaactggtgggggaatgactgttgcgctttcagacattgcagtattaaggaatcttcttatgccattgcaagacctgaatgacgcagatgagttgtgtaaatatctggagtcattttatactttgcgcaagccagtggcttccaccataaatactttggctggagctctgtataaggtgttctgtgcttctcctgatcaagcgaggagggagatgcgagatgcgtgttttgactatttgagccttggagggcacttgttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcatttaaatctagtcagactccctactctgtagaaatgtatattgtggcattcactttatatcttagagagttcaatttgtacgtcagttgtagctctgagatagacatcaacggttatgtttctgtattgtacatcacattgatgtatgtatcagtttgttataaaggtctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="79544" stop="84957"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79844" g_stop="80375" g_length="532"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="532" r_length="532" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80376" i_stop="81258" i_length="883">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81259" g_stop="81370" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="644" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81371" i_stop="81976" i_length="606">
            <donor d_prob="0.191" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81977" g_stop="82151" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="645" r_stop="819" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="82152" i_stop="82347" i_length="196">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="82348" g_stop="82516" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="820" r_stop="988" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="82517" i_stop="82684" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="82685" g_stop="82909" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="989" r_stop="1213" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="82910" i_stop="83095" i_length="186">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="83096" g_stop="83371" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1214" r_stop="1489" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="83372" i_stop="83688" i_length="317">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="83689" g_stop="83967" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="1490" r_stop="1769" r_length="280" r_score="0.993"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="83968" i_stop="84125" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="84126" g_stop="84657" g_length="532"/>
          <reference_exon_boundary r_type="cDNA" r_start="1770" r_stop="2301" r_length="532" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-U575864" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2300</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U575864" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79844" e_stop="80375"/>
          <exon e_start="81259" e_stop="81370"/>
          <exon e_start="81977" e_stop="82151"/>
          <exon e_start="82348" e_stop="82516"/>
          <exon e_start="82685" e_stop="82909"/>
          <exon e_start="83096" e_stop="83371"/>
          <exon e_start="83689" e_stop="83967"/>
          <exon e_start="84126" e_stop="84657"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTTTTTATTGTCATCCTCGCAATTTTCACCCAAAATCACACGGTCCAATTGGATCCCCAATTTCGGATTGCGATGCTTCTTATAAATACAAACAATTTCTACCATGCTTTCTCCCTCGTTTTCTCCAAACACAAATTTCCTCTATCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAGGTCTATTCCCAATTGCTTTCTAATTTACGGTTTTCATATTTCTAAAAGTCCCTTTGAAAGAAATGAAAATTTTCTTATCGGCAAGGTCATAATATTGGAATGGAAGGAAGCATGATGAAAAAATTGTATTTGGATACGGAAAATTCCTCTTACTATTATTATGTTTTCCTCACTGTTTTCTGTTTCTTTATACCTGAAATTGCTGCACTTGAGCCGATTGTCTCTTCGAAACAATCTCTCTGTATTAGGTAATGGTAAGGTCCTATGTACACCCTACCCTCGCCAGATCCCACTTGTGGGATTTCATCATTATGTTGTTCTTGTTGGATATGCAAAATCCATGAAAAAAAATCTAAACTTTTAGCTCCCCTCCAAGAGGTCTTTAGAATATGAATTATTTGCATGTATGATACTAGTTCCTTTACTGGGCACTTTATCTTATCAAGAGTTAATTGGACCAACTTTTAGAAATAAATTGTAGATAAATTCATTTTTCCTTTAATGAAAATTGAAATGACCGGAAACCATAGGGAAAGTACTATAAGTTGCAATTCTTCTCGTATCAAAATGATAAAAGAAGACGATCTAATGATGTGGTCTCAATTTCACATAGTTTGAAACTTGGGAAGGGACATAGGCTAAGCATTTCGAGAAGAGGGAGTAGACTATTTTGTTTAATGCAACATACAGGTGCTGTTAATATTCTTATCTTGATGGTAAGTTGTGATCTGTAATGGCTTGCCTTGTCATGGAAAATTTGGTTTTTGATTCCTAACACTTGTGTCCACGAGCAGGAAACAAGAAAATGTTTGTCTAGTGACTTTTACCAATTGTCCTGATCCCCCTTTAGCATCTAAACATTTGTTTTTTGCCACTGCTGCAGGAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGACAGAGCCGGACCGGATTGTTGGCGAATTGCTTCAGCCTGGGGGTTATCTTAAATTGATTGAGTTGGGCATTGAAGGTTTGTCTAAAAAAAAGAAAAAAAAAACAAAATCAAACAAGCATAAGAGCTTACAATTGATCATTTTGTGATAGAGCTGGTAGGCACAAGATATACTCCCTCCGTTCACTTTATTTGTCCACCATACAAAAAACGAATTTTCACTTTTGCTTGTTACTTTTAGCATATCAATAGAAGTACATATTTTTTTCATGTTTTGTCCTCAACATGTATTACTTATTCTCAAAACATTTCCCTAGACCTAAGACTATACATCTATTCATATGGGTATTTTGGCAAAAGTTACTCATATTAACCATTGTTTCTAAAGAGCGTGCAAAGACCAAAGTGGACAATTAAAAGTGAACGGTGGGAGTATTTTACTATAGTATTTGAAATAAGTTGTAGTTTTAACTTGGGTTGCATGGACTCTTCACTTTCAATGCCGCACCCGTGTTGGATTCTCTAAAATACGCTACTTTTGGAAAATGCGACACACCCATTGATATTTTTGAAGAGTCCAAGCTACGTAGTTTTTAACTTGATTAGGATATAGAATTCACTTTTCGTTGTACTATTCTAGGTTTGCGTAATTTTGTGCTCTTGACGTTTGCCATTGTAATGCAGATTGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAGGTACGTACAGTTTCCCTGCATGGTACTATTTTTATTTTTCTTAACTTTAGAATATAGTCATACACACAGCCAGTATAAAAAGTCTGTCCTTGTTTTTTCTACCTCACATACAATTGCCTGTTCCTAAAGATAGCTATTTGGTTCCTCCCAATGTGCCACCATGATGGTATCTTTACATTTTTTCAGGTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTGCAAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAGGTAAAGCTAAAACTGTTGTCTGGATAACACTATCATCGGTTGAATGATTTGCAATATGTGTTGTGGCTTATTTAAAAAAATATTTTATTTCAGCTTTTTGATCAAGTGTAGGGAGAACCTTCTTTCTAGCAATTTGACGTGGCATATGATGTCTTTTATCTCTACATAAAAATCATACGTTATTCGAAGCAGTTTTAATGTCTAAAACTGCATCACTTTTTTTAGTGCTATTCCCTCTAAAAGAATACAAACTAACAGAACTGGATTTCTGACTTTATTAGCCTGTTACTTATTCTTGTATTGGTCTCTGTTTTCAGCCAGTGGCTTCCACCATAAATACTTTGGCTGGAGCTCTGTATAAGGTGTTCTGTGCTTCTCCTGATCAAGCGAGGAGGGAGATGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGA-GGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAAATGTATATTGTGGCATTCACTTTATATCTTAGAGAGTTCAATTTGTACGTCAGTTGTAGCTCTGAGATAGACATCAACGGTTATGTTTCTGTATTGTACATCACATTGATGTATGTATCAGTTTGTTATAAAGGTCTGC</genome_strand>
        <mrna_strand>GTTTTTTTTTATTGTCATCCTCGCAATTTTCACCCAAAATCACACGGTCCAATTGGATCCCCAATTTCGGATTGCGATGCTTCTTATAAATACAAACAATTTCTACCATGCTTTCTCCCTCGTTTTCTCCAAACACAAATTTCCTCTATCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGACAGAGCCGGACCGGATTGTTGGCGAATTGCTTCAGCCTGGGGGTTATCTTAAATTGATTGAGTTGGGCATTGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG..........................................................................................................................................................................................GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTGCAAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAG.............................................................................................................................................................................................................................................................................................................................CCAGTGGCTTCCACCATAAATACTTTGGCTGGAGCTCTGTATAAGGTGTTCTGTGCTTCTCCTGATCAAGCGAGGAGGGAGATGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAGGGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAAATGTATATTGTGGCATTCACTTTATATCTTAGAGAGTTCAATTTGTACGTCAGTTGTAGCTCTGAGATAGACATCAACGGTTATGTTTCTGTATTGTACATCACATTGATGTATGTATCAGTTTGTTATAAAGGTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575264" ref_strand="+" ref_description="SGN-U575264 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|113205363|gb|AAT66771.2| (e_value=2e-67) Putative; (*SWP) sp|Q9UR07|RT23_SCHPO (e_value=5e-21) Retrotransposable element Tf2 155 kDa protein type 3 OS=Schizosaccharomyces pombe GN=Tf2-11; ">
      <seq>acccaattccgcatgcaatgttttccaaaacttagaagtaaactgcatacctctatctgatatgatggagagtggaaccccatgcaaccgaacaatttctgagacatatattttggctaacttctctgcattgtaagtcaccttgaccggaatgaaatgagcagacttagttaacctatcaacaatcacccaaatagagtcatacttactcattgtctttggaaggccaactacaaaatccattgcaattctctcccacttccattcaggaatgagcattctctgaagtgttcctccaggcctctggtgttcatactttacttgttgacagtttggacatttggcaataaagtcaacaatatcacgcttcattctactccaccaaaagtgttgctttaggtcacggtacatcttggttgcacccggatgtatagaataccttgaactatgagcctctgtcagaatagtgttgatcaaatcatcaactcggggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="88777" stop="87687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88477" g_stop="87987" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="493" r_length="493" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-U575264" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U575264" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88477" e_stop="87987"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCCAATTCCGCATGCAATGTTTTCCAAAACTTAGAAGTAAACTGCGTACCTCTATCTGATATGATGAAGAGCAGAACCCCATGCAATTGAACGATTTCTGAGATATAGATCTTGGCTAACTTCTCGGCATTGTAAGTCACCTTAACCGGAATGAAATGAGCAGACTTAGTTAACCTATCAACAATCACCCAAATAGAGTCGTACTTACTCATCGTCTTTGGAAGACCAACCACGAAGTCCATTGCGATTCTCTCCCATTTCCATTCTGGAATGCGCATTCTCTGAAGTGTTCCTCCGGGCCTCTGGTGTTCATACTTTACTTGCTGACAATTTGGACATTTGGCAACAAAATCAACAATGTCGCGCTTCATTCTACTCCACCAAAAGTGTTGCTTTAGGTCACGG--CATCTTGGTTGCACCAGGATGTATAGAATATCTGGAACTATGAGCCTCTGTAAGAATAGTGTAAATCAAATCATCAACGCGGGGT</genome_strand>
        <mrna_strand>ACCCAATTCCGCATGCAATGTTTTCCAAAACTTAGAAGTAAACTGCATACCTCTATCTGATATGATGGAGAGTGGAACCCCATGCAACCGAACAATTTCTGAGACATATATTTTGGCTAACTTCTCTGCATTGTAAGTCACCTTGACCGGAATGAAATGAGCAGACTTAGTTAACCTATCAACAATCACCCAAATAGAGTCATACTTACTCATTGTCTTTGGAAGGCCAACTACAAAATCCATTGCAATTCTCTCCCACTTCCATTCAGGAATGAGCATTCTCTGAAGTGTTCCTCCAGGCCTCTGGTGTTCATACTTTACTTGTTGACAGTTTGGACATTTGGCAATAAAGTCAACAATATCACGCTTCATTCTACTCCACCAAAAGTGTTGCTTTAGGTCACGGTACATCTTGGTTGCACCCGGATGTATAGAATACCTTGAACTATGAGCCTCTGTCAGAATAGTGTTGATCAAATCATCAACTCGGGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575864" ref_strand="+" ref_description="SGN-U575864 Tomato 200607#2 [38 ESTs aligned] (*GB) gi|33337947|gb|AAQ13595.1| (e_value=0) putative squalene epoxidase [Lycopersicon esculentum]; (*ATH) AT4G37760.1 (e_value=0) | Symbol: None | squalene monooxygenase, putative / squalene epoxidase, putative, similar to SP:O65404 (SE 1,1), SP:O65402 (SE 1,2), SP:O65403 (SE 2) | chr4:17743881-17746672 FORWARD | Aliases: T28I19.40, T28I19_40; (*SWP) sp|O48651|ERG1_PANGI (e_value=0) Squalene monooxygenase OS=Panax ginseng; ">
      <seq>gtttttttttattgtcatcctcgcaattttcacccaaaatcacacggtccaattggatccccaatttcggattgcgatgcttcttataaatacaaacaatttctaccatgctttctccctcgttttctccaaacacaaatttcctctatctgcagcctctcctccaccacccaaatcatcattttctcaggcctctgattcaattacaaagaacaaattgaagttacctttggtttctttgaccaaatctttgccaaatacacaatttgatcttattcagagcgagaaaatggtgaatttcatgatggataagtatattgttcccagttttgttgtttctctattggggttccttcttctttatgttttgcgaccaagaacccccaattataagaaaatggatcttaaatctacccgaaaatgtgaaacccacaacgtaatttctagaaaattggagaaagggaccgatgccgatgttataattgttggagctggggttgctggtgctgctcttgctcatacccttgctaaggaaggacgaaatgttcacgtcatcgaaagggatttgacagagccggaccggattgttggcgaattgcttcagcctgggggttatcttaaattgattgagttgggcattgaagattgtgttgaggatattgatgcccagcgggtggttggatatgctcttttcaaggatggaaagagcacaaatgtttcctatcccttgaaaaacttccattcggatgtggctgggagaagctttcacaatgggcgcttcatacagaagatgagagaaaaagcagctactcttcccaatgtacgattggaacaaggcaccgtaacatccctgattgaagaaaatggatccattaagggtgttcagtacaaaactaaggctggccaagaacttaaagcacatgctcctcttacagtagtttgtgatgggtgcttctcaaacttgcgacgctcgctttgtgaccctaaggttgatgttccctcttgctttgttggtctggtattggaattggagaatgatcgacttccatacccaaaccatgggcatgttattctggcagatccttctcccatcttattttatcctatcagtagcacggaaattcgctgcttggtcgatgtacctggtcaaaagcttccttctcttgctaatggtgatatggcaaattatttgaaaactatggtagctccccaggtaccacctgagctacgtgatgcgtttctatctgcaattgataaggggcatattaaaactatgccaaacaggagcatgccagctgctccctatcctacacctggagctctgttgctaggcgattctttcaacatgcgccatccattaactggtgggggaatgactgttgcgctttcagacattgcagtattaaggaatcttcttatgccattgcaagacctgaatgacgcagatgagttgtgtaaatatctggagtcattttatactttgcgcaagccagtggcttccaccataaatactttggctggagctctgtataaggtgttctgtgcttctcctgatcaagcgaggagggagatgcgagatgcgtgttttgactatttgagccttggagggcacttgttcaactggacctgtagctctactctctggtcttgatcctaatccaatgagcttggtgctccatttctttgcagtggccgtttatggagttggtcgtttacttgtaccttttccttctccaaagaagttgtggatcggagctaaattaatattgtctgcatcaggcatcatatttcccatcataaaggcagaagggatccggcaaatgttctttccaacaacaataccagcatatcacagagctcctcccgtgaagacggagtcagattaagcagaaaatttgttgaagttttgttccatgaatagcattaacatttttgcagttcctttctcgaagcacgaaatgtaagttccactctcccctcaccccaaaccctacaaatagaataagaatgacgacgaaaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcattgaaatctaccttattgtaggcatattataccaaaaggaacttcaagtgtacgtattcatttaaatctagtcagactccctactctgtagaaatgtatattgtggcattcactttatatcttagagagttcaatttgtacgtcagttgtagctctgagatagacatcaacggttatgtttctgtattgtacatcacattgatgtatgtatcagtttgttataaaggtctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="79544" stop="101251"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96138" g_stop="96669" g_length="532"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="532" r_length="532" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96670" i_stop="97552" i_length="883">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97553" g_stop="97664" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="644" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="97665" i_stop="98270" i_length="606">
            <donor d_prob="0.191" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98271" g_stop="98445" g_length="175"/>
          <reference_exon_boundary r_type="cDNA" r_start="645" r_stop="819" r_length="175" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98446" i_stop="98641" i_length="196">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98642" g_stop="98810" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="820" r_stop="988" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98811" i_stop="98978" i_length="168">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98979" g_stop="99203" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="989" r_stop="1213" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="99204" i_stop="99389" i_length="186">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="99390" g_stop="99665" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1214" r_stop="1489" r_length="276" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="99666" i_stop="99982" i_length="317">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="99983" g_stop="100261" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="1490" r_stop="1769" r_length="280" r_score="0.993"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="100262" i_stop="100419" i_length="158">
            <donor d_prob="0.935" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="100420" g_stop="100951" g_length="532"/>
          <reference_exon_boundary r_type="cDNA" r_start="1770" r_stop="2301" r_length="532" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-U575864" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2300</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U575864" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96138" e_stop="96669"/>
          <exon e_start="97553" e_stop="97664"/>
          <exon e_start="98271" e_stop="98445"/>
          <exon e_start="98642" e_stop="98810"/>
          <exon e_start="98979" e_stop="99203"/>
          <exon e_start="99390" e_stop="99665"/>
          <exon e_start="99983" e_stop="100261"/>
          <exon e_start="100420" e_stop="100951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTTTTTATTGTCATCCTCGCAATTTTCACCCAAAATCACACGGTCCAATTGGATCCCCAATTTCGGATTGCGATGCTTCTTATAAATACAAACAATTTCTACCATGCTTTCTCCCTCGTTTTCTCCAAACACAAATTTCCTCTATCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAGGTCTATTCCCAATTGCTTTCTAATTTACGGTTTTCATATTTCTAAAAGTCCCTTTGAAAGAAATGAAAATTTTCTTATCGGCAAGGTCATAATATTGGAATGGAAGGAAGCATGATGAAAAAATTGTATTTGGATACGGAAAATTCCTCTTACTATTATTATGTTTTCCTCACTGTTTTCTGTTTCTTTATACCTGAAATTGCTGCACTTGAGCCGATTGTCTCTTCGAAACAATCTCTCTGTATTAGGTAATGGTAAGGTCCTATGTACACCCTACCCTCGCCAGATCCCACTTGTGGGATTTCATCATTATGTTGTTCTTGTTGGATATGCAAAATCCATGAAAAAAAATCTAAACTTTTAGCTCCCCTCCAAGAGGTCTTTAGAATATGAATTATTTGCATGTATGATACTAGTTCCTTTACTGGGCACTTTATCTTATCAAGAGTTAATTGGACCAACTTTTAGAAATAAATTGTAGATAAATTCATTTTTCCTTTAATGAAAATTGAAATGACCGGAAACCATAGGGAAAGTACTATAAGTTGCAATTCTTCTCGTATCAAAATGATAAAAGAAGACGATCTAATGATGTGGTCTCAATTTCACATAGTTTGAAACTTGGGAAGGGACATAGGCTAAGCATTTCGAGAAGAGGGAGTAGACTATTTTGTTTAATGCAACATACAGGTGCTGTTAATATTCTTATCTTGATGGTAAGTTGTGATCTGTAATGGCTTGCCTTGTCATGGAAAATTTGGTTTTTGATTCCTAACACTTGTGTCCACGAGCAGGAAACAAGAAAATGTTTGTCTAGTGACTTTTACCAATTGTCCTGATCCCCCTTTAGCATCTAAACATTTGTTTTTTGCCACTGCTGCAGGAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGACAGAGCCGGACCGGATTGTTGGCGAATTGCTTCAGCCTGGGGGTTATCTTAAATTGATTGAGTTGGGCATTGAAGGTTTGTCTAAAAAAAAGAAAAAAAAAACAAAATCAAACAAGCATAAGAGCTTACAATTGATCATTTTGTGATAGAGCTGGTAGGCACAAGATATACTCCCTCCGTTCACTTTATTTGTCCACCATACAAAAAACGAATTTTCACTTTTGCTTGTTACTTTTAGCATATCAATAGAAGTACATATTTTTTTCATGTTTTGTCCTCAACATGTATTACTTATTCTCAAAACATTTCCCTAGACCTAAGACTATACATCTATTCATATGGGTATTTTGGCAAAAGTTACTCATATTAACCATTGTTTCTAAAGAGCGTGCAAAGACCAAAGTGGACAATTAAAAGTGAACGGTGGGAGTATTTTACTATAGTATTTGAAATAAGTTGTAGTTTTAACTTGGGTTGCATGGACTCTTCACTTTCAATGCCGCACCCGTGTTGGATTCTCTAAAATACGCTACTTTTGGAAAATGCGACACACCCATTGATATTTTTGAAGAGTCCAAGCTACGTAGTTTTTAACTTGATTAGGATATAGAATTCACTTTTCGTTGTACTATTCTAGGTTTGCGTAATTTTGTGCTCTTGACGTTTGCCATTGTAATGCAGATTGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAAGTAAGCTTACCCATGCAGTATTATTTATTAGAACTGTTTTCGACACATCATATTAATCTTTCCTTATTAATAAAAAGAACTGTCTAGACACATTTCATGCTTTTAGTAATTGATACAATCATGTAATTGTAATTATCCTTTTGCTTATCATAGTTGCAAATAATCAATTGACTGGTTTTTATTAAATTATGTACAGTGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAGGTGAAGTTAATACCACTAAACATGTCAGTTGATTTGTTTCTGTAGTGTCATATGCACACATCAGGTCAAGTAAAACCTTCATATGCCTGGTGATATATGTTACCTGCACCGAGTTTGGAAAATTTAGATCTTGAAACTTATTGTAAGTGCGAGTATTGACATGTGCAGGTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAGGTACGTACAGTTTCCCTGCATGGTACTATTTTTATTTTTCTTAACTTTAGAATATAGTCATACACACAGCCAGTATAAAAAGTCTGTCCTTGTTTTTTCTACCTCACATACAATTGCCTGTTCCTAAAGATAGCTATTTGGTTCCTCCCAATGTGCCACCATGATGGTATCTTTACATTTTTTCAGGTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTGCAAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAGGTAAAGCTAAAACTGTTGTCTGGATAACACTATCATCGGTTGAATGATTTGCAATATGTGTTGTGGCTTATTTAAAAAAATATTTTATTTCAGCTTTTTGATCAAGTGTAGGGAGAACCTTCTTTCTAGCAATTTGACGTGGCATATGATGTCTTTTATCTCTACATAAAAATCATACGTTATTCGAAGCAGTTTTAATGTCTAAAACTGCATCACTTTTTTTAGTGCTATTCCCTCTAAAAGAATACAAACTAACAGAACTGGATTTCTGACTTTATTAGCCTGTTACTTATTCTTGTATTGGTCTCTGTTTTCAGCCAGTGGCTTCCACCATAAATACTTTGGCTGGAGCTCTGTATAAGGTGTTCTGTGCTTCTCCTGATCAAGCGAGGAGGGAGATGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGA-GGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTGGTATGTACCTTAAATGTAGTATTCAAACTGTCTTCGTTGACTCTGAGCATGTGTGTGTTATATATTGAGCTACTTTCCAGTTGAAATTCCTACATACTCGTTCACCTTGTTTGAAAGTCTTGACCATTTTGGCATGCATGCTCTTTTTTTTTGTTCAGTCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAAATGTATATTGTGGCATTCACTTTATATCTTAGAGAGTTCAATTTGTACGTCAGTTGTAGCTCTGAGATAGACATCAACGGTTATGTTTCTGTATTGTACATCACATTGATGTATGTATCAGTTTGTTATAAAGGTCTGC</genome_strand>
        <mrna_strand>GTTTTTTTTTATTGTCATCCTCGCAATTTTCACCCAAAATCACACGGTCCAATTGGATCCCCAATTTCGGATTGCGATGCTTCTTATAAATACAAACAATTTCTACCATGCTTTCTCCCTCGTTTTCTCCAAACACAAATTTCCTCTATCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGACAGAGCCGGACCGGATTGTTGGCGAATTGCTTCAGCCTGGGGGTTATCTTAAATTGATTGAGTTGGGCATTGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA....................................................................................................................................................................................................TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG........................................................................................................................................................................GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG..........................................................................................................................................................................................GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTGCAAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAG.............................................................................................................................................................................................................................................................................................................................CCAGTGGCTTCCACCATAAATACTTTGGCTGGAGCTCTGTATAAGGTGTTCTGTGCTTCTCCTGATCAAGCGAGGAGGGAGATGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAGGGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG..............................................................................................................................................................TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAAATGTATATTGTGGCATTCACTTTATATCTTAGAGAGTTCAATTTGTACGTCAGTTGTAGCTCTGAGATAGACATCAACGGTTATGTTTCTGTATTGTACATCACATTGATGTATGTATCAGTTTGTTATAAAGGTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565890" ref_strand="+" ref_description="SGN-U565890 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|14715592|gb|AAK72432.1|AF179248_1 (e_value=0) 1-aminocyclopropane-1-carboxylate; (*ATH) AT4G37770.1 (e_value=0)  Symbol: None | 1-aminocyclopropane-1-carboxylate synthase, putative / ACC synthase, putative, similar to 1-aminocyclopropane-1-carboxylate synthase, Arabidopsis thaliana, GI:940370 (S71174) | chr4:17752216-17753919 FORWARD | Aliases: T28I19.50, T28I... ; (*SWP) sp|Q42881|1A13_SOLLC (e_value=0) 1-aminocyclopropane-1-carboxylate synthase 3 OS=Solanum lycopersicum GN=ACS3; ">
      <seq>acatagcaacaatcttctctaaatattttctgcctctcaaaacaaacataaaaaaattcaagtgcaaatgaagcttttatcgaagaaagccatgtgtaactcacatggacaagattcttcctactttctaggatgggaagagtatcagaaaaacccatatgatgaaattcgtaatcctaaaggaatcattcagatgggtctcgcagagaatcagctctctttcgatttattagagtcatggcttactctaaatccagatgcatctgcatttaagagaaatggccactcaatatttagagagctttccttatttcaagattaccatggtcttccagctttcaaagatgcattggttcaattcatgtctgaaatcagaggaaacaaagtaagctttgattcaaataagcttgtacttacagctggtgctacttctgcaaatgagacactcatgttttgcctcgctgatcctggccatgcttttctccttcccactccatactaccctggatttgatagagacttaaaatggagaacaggagctgagattgttccaatacaatgcacaagttcaaacggatttagaatcacagaatcagctcttgaagaagcttatacagaagccgaaaggcgaaaccttagagtgaaaggggttttagtcactaacccttcgaatccattaggcacaacattaaccaaaaaagaactccaacttcttcttaccttcgtatctacaaaacaaatccatctcatcagtgatgagatatattctggcactgtttttaactcacctaaattcgtcagtgtcatggaagtactaatcgaaaacaactacatgtacactgatgtatgggatagagttcacatagtctatagtctttcgaaagatttgggacttccaggatttcgagttggtgccatttattccaacgacgatagggtcgtctctgcagccacaaaaatgtctagttttggattaatttcatctcaaactcaataccttctttctgctttgctatcagacaaaaagttcacgaaaaattacgtgtctgaaaatcaaaagaggctgaaaaaacgacatgaaatgctagttggtggtcttaaacaaattggaataaggtgccttgagagcaatgctgggttgttttgttgggtggatatgagacatcttttaagttcaaacacatttgatggagaaatggaattatggaagaaaatagtgtacgaagtagggctaaatatttcagctggatcgtcatgccattgtacagaaccgggttggtttcgtgcatgttttgctaacatgtcagaagatacgttaaatatcgccatacaacgtttgaaggcttttgttgattcaagggttaataacaaggatgatattcaaaatcagcagcagtgttctaataagaagaagtcattttccaaatgggtttttcgactatcgttcaatgaacgtcaaagagaacgatagtctagccatgtgaaagttcgtaaattcatttttgtttttttaaatctcgatagttaattagatgttgagatttctaaaagattttgtaccataatacatacttttaaattgttttaattgtagagggtcactgtccatttgattggacga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="-" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="104236" stop="101817"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="103936" g_stop="103591" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="346" r_length="346" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="103590" i_stop="103488" i_length="103">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103487" g_stop="103327" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="507" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103326" i_stop="103231" i_length="96">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103230" g_stop="102117" g_length="1114"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="1621" r_length="1114" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="-" ref_id="SGN-U565890" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U565890" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="103936" e_stop="103591"/>
          <exon e_start="103487" e_stop="103327"/>
          <exon e_start="103230" e_stop="102117"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATAGCAACAATCTTCTCTAAATATTTTCTGCCTCTCAAAACAAACATAAAAAAATTCAAGTGCAAATGAAGCTTTTATCGAAGAAAGCCATGTGTAACTCACATGGACAAGATTCTTCCTACTTTCTAGGATGGGAAGAGTATCAGAAAAACCCATATGATGAAATTCGTAATCCTAAAGGAATCATTCAGATGGGTCTCGCAGAGAATCAGCTCTCTTTCGATTTATTAGAGTCATGGCTTACTCTAAATCCAGATGCATCTGCATTTAAGAGAAATGGCCACTCAATATTTAGAGAGCTTTCCTTATTTCAAGATTACCATGGTCTTCCAGCTTTCAAAGATGTAAGTTTGTGATTGCAGTCGAATTTGACTTATATACACTGACTAACGTAACTGACTTATCATATATTTATTATTAACTTCACAACCTCACATTGTAATGCAGGCATTGGTTCAATTCATGTCTGAAATCAGAGGAAACAAAGTAAGCTTTGATTCAAATAAGCTTGTACTTACAGCTGGTGCTACTTCTGCAAATGAGACACTCATGTTTTGCCTCGCTGATCCTGGCCATGCTTTTCTCCTTCCCACTCCATACTACCCTGGGTACGTTTAGTTTACACTCACATTATTATTGATCGTCTATTTTAACACAGGGCGAACTATGTACTTTACTAATTATGATATTGTGTAATAATGCAGATTTGATAGAGACTTAAAATGGAGAACAGGAGCTGAGATTGTTCCAATACAATGCACAAGTTCAAACGGATTTAGAATCACAGAATCAGCTCTTGAAGAAGCTTATACAGAAGCCGAAAGGCGAAACCTTAGAGTGAAAGGGGTTTTAGTCACTAACCCTTCGAATCCATTAGGCACAACATTAACCAAAAAAGAACTCCAACTTCTTCTTACCTTCGTATCTACAAAACAAATCCATCTCATCAGTGATGAGATATATTCTGGCACTGTTTTTAACTCACCTAAATTCGTCAGTGTCATGGAAGTACTAATCGAAAACAACTACATGTACACTGATGTATGGGATAGAGTTCACATAGTCTATAGTCTTTCGAAAGATTTGGGACTTCCAGGATTTCGAGTTGGTGCCATTTATTCCAACGACGATAGGGTCGTCTCTGCAGCCACAAAAATGTCTAGTTTTGGATTAATTTCATCTCAAACTCAATACCTTCTTTCTGCTTTGCTATCAGACAAAAAGTTCACGAAAAATTACGTGTCTGAAAATCAAAAGAGGCTGAAAAAACGACATGAAATGCTAGTTGGTGGTCTTAAACAAATTGGAATAAGGTGCCTTGAGAGCAATGCTGGGTTGTTTTGTTGGGTGGATATGAGACATCTTTTAAGTTCAAACACATTTGATGGAGAAATGGAATTATGGAAGAAAATAGTGTACGAAGTAGGGCTAAATATTTCAGCTGGATCGTCATGCCATTGTACAGAACCGGGTTGGTTTCGTGCATGTTTTGCTAACATGTCAGAAGATACGTTAAATATCGCCATACAACGTTTGAAGGCTTTTGTTGATTCAAGGGTTAATAACAAGGATGATATTCAAAATCAGCAGCAGTGTTCTAATAAGAAGAAGTCATTTTCCAAATGGGTTTTTCGACTATCGTTCAATGAACGTCAAAGAGAACGATAGTCTAGTCATGTGAAAGTTCGTAAATTCATTTTTGTTTTTTTAAATCTCGATAGTTAATTAGATGTTGAGATTTCTAAAAGATTTTGTACCATAATACATACTTTTAAATTGTTTTAATTGTAGAGGGTCACTGTCCATTTGATTGGACGA</genome_strand>
        <mrna_strand>ACATAGCAACAATCTTCTCTAAATATTTTCTGCCTCTCAAAACAAACATAAAAAAATTCAAGTGCAAATGAAGCTTTTATCGAAGAAAGCCATGTGTAACTCACATGGACAAGATTCTTCCTACTTTCTAGGATGGGAAGAGTATCAGAAAAACCCATATGATGAAATTCGTAATCCTAAAGGAATCATTCAGATGGGTCTCGCAGAGAATCAGCTCTCTTTCGATTTATTAGAGTCATGGCTTACTCTAAATCCAGATGCATCTGCATTTAAGAGAAATGGCCACTCAATATTTAGAGAGCTTTCCTTATTTCAAGATTACCATGGTCTTCCAGCTTTCAAAGAT.......................................................................................................GCATTGGTTCAATTCATGTCTGAAATCAGAGGAAACAAAGTAAGCTTTGATTCAAATAAGCTTGTACTTACAGCTGGTGCTACTTCTGCAAATGAGACACTCATGTTTTGCCTCGCTGATCCTGGCCATGCTTTTCTCCTTCCCACTCCATACTACCCTGG................................................................................................ATTTGATAGAGACTTAAAATGGAGAACAGGAGCTGAGATTGTTCCAATACAATGCACAAGTTCAAACGGATTTAGAATCACAGAATCAGCTCTTGAAGAAGCTTATACAGAAGCCGAAAGGCGAAACCTTAGAGTGAAAGGGGTTTTAGTCACTAACCCTTCGAATCCATTAGGCACAACATTAACCAAAAAAGAACTCCAACTTCTTCTTACCTTCGTATCTACAAAACAAATCCATCTCATCAGTGATGAGATATATTCTGGCACTGTTTTTAACTCACCTAAATTCGTCAGTGTCATGGAAGTACTAATCGAAAACAACTACATGTACACTGATGTATGGGATAGAGTTCACATAGTCTATAGTCTTTCGAAAGATTTGGGACTTCCAGGATTTCGAGTTGGTGCCATTTATTCCAACGACGATAGGGTCGTCTCTGCAGCCACAAAAATGTCTAGTTTTGGATTAATTTCATCTCAAACTCAATACCTTCTTTCTGCTTTGCTATCAGACAAAAAGTTCACGAAAAATTACGTGTCTGAAAATCAAAAGAGGCTGAAAAAACGACATGAAATGCTAGTTGGTGGTCTTAAACAAATTGGAATAAGGTGCCTTGAGAGCAATGCTGGGTTGTTTTGTTGGGTGGATATGAGACATCTTTTAAGTTCAAACACATTTGATGGAGAAATGGAATTATGGAAGAAAATAGTGTACGAAGTAGGGCTAAATATTTCAGCTGGATCGTCATGCCATTGTACAGAACCGGGTTGGTTTCGTGCATGTTTTGCTAACATGTCAGAAGATACGTTAAATATCGCCATACAACGTTTGAAGGCTTTTGTTGATTCAAGGGTTAATAACAAGGATGATATTCAAAATCAGCAGCAGTGTTCTAATAAGAAGAAGTCATTTTCCAAATGGGTTTTTCGACTATCGTTCAATGAACGTCAAAGAGAACGATAGTCTAGCCATGTGAAAGTTCGTAAATTCATTTTTGTTTTTTTAAATCTCGATAGTTAATTAGATGTTGAGATTTCTAAAAGATTTTGTACCATAATACATACTTTTAAATTGTTTTAATTGTAGAGGGTCACTGTCCATTTGATTGGACGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565890" ref_strand="+" ref_description="SGN-U565890 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|14715592|gb|AAK72432.1|AF179248_1 (e_value=0) 1-aminocyclopropane-1-carboxylate; (*ATH) AT4G37770.1 (e_value=0)  Symbol: None | 1-aminocyclopropane-1-carboxylate synthase, putative / ACC synthase, putative, similar to 1-aminocyclopropane-1-carboxylate synthase, Arabidopsis thaliana, GI:940370 (S71174) | chr4:17752216-17753919 FORWARD | Aliases: T28I19.50, T28I... ; (*SWP) sp|Q42881|1A13_SOLLC (e_value=0) 1-aminocyclopropane-1-carboxylate synthase 3 OS=Solanum lycopersicum GN=ACS3; ">
      <seq>acatagcaacaatcttctctaaatattttctgcctctcaaaacaaacataaaaaaattcaagtgcaaatgaagcttttatcgaagaaagccatgtgtaactcacatggacaagattcttcctactttctaggatgggaagagtatcagaaaaacccatatgatgaaattcgtaatcctaaaggaatcattcagatgggtctcgcagagaatcagctctctttcgatttattagagtcatggcttactctaaatccagatgcatctgcatttaagagaaatggccactcaatatttagagagctttccttatttcaagattaccatggtcttccagctttcaaagatgcattggttcaattcatgtctgaaatcagaggaaacaaagtaagctttgattcaaataagcttgtacttacagctggtgctacttctgcaaatgagacactcatgttttgcctcgctgatcctggccatgcttttctccttcccactccatactaccctggatttgatagagacttaaaatggagaacaggagctgagattgttccaatacaatgcacaagttcaaacggatttagaatcacagaatcagctcttgaagaagcttatacagaagccgaaaggcgaaaccttagagtgaaaggggttttagtcactaacccttcgaatccattaggcacaacattaaccaaaaaagaactccaacttcttcttaccttcgtatctacaaaacaaatccatctcatcagtgatgagatatattctggcactgtttttaactcacctaaattcgtcagtgtcatggaagtactaatcgaaaacaactacatgtacactgatgtatgggatagagttcacatagtctatagtctttcgaaagatttgggacttccaggatttcgagttggtgccatttattccaacgacgatagggtcgtctctgcagccacaaaaatgtctagttttggattaatttcatctcaaactcaataccttctttctgctttgctatcagacaaaaagttcacgaaaaattacgtgtctgaaaatcaaaagaggctgaaaaaacgacatgaaatgctagttggtggtcttaaacaaattggaataaggtgccttgagagcaatgctgggttgttttgttgggtggatatgagacatcttttaagttcaaacacatttgatggagaaatggaattatggaagaaaatagtgtacgaagtagggctaaatatttcagctggatcgtcatgccattgtacagaaccgggttggtttcgtgcatgttttgctaacatgtcagaagatacgttaaatatcgccatacaacgtttgaaggcttttgttgattcaagggttaataacaaggatgatattcaaaatcagcagcagtgttctaataagaagaagtcattttccaaatgggtttttcgactatcgttcaatgaacgtcaaagagaacgatagtctagccatgtgaaagttcgtaaattcatttttgtttttttaaatctcgatagttaattagatgttgagatttctaaaagattttgtaccataatacatacttttaaattgttttaattgtagagggtcactgtccatttgattggacga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="109957" stop="112249"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110257" g_stop="110602" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="346" r_length="346" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110603" i_stop="110705" i_length="103">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110706" g_stop="110866" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="507" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110867" i_stop="110962" i_length="96">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110963" g_stop="111949" g_length="987"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="1494" r_length="987" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-U565890" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1494</cumulative_length_of_scored_exons>
        <coverage percentage="0.922" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U565890" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110257" e_stop="110602"/>
          <exon e_start="110706" e_stop="110866"/>
          <exon e_start="110963" e_stop="111949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATAGCAACAATCTTCTCTAAATATTTTCTGCCTCTCAAAACAAACATAAAAAAATTCAAGTGCAAATGAAGCTTTTATCGAAGAAAGCCATGTGTAACTCACATGGACAAGATTCTTCCTACTTTCTAGGATGGGAAGAGTATCAGAAAAACCCATATGATGAAATTCGTAATCCTAAAGGAATCATTCAGATGGGTCTCGCAGAGAATCAGCTCTCTTTCGATTTATTAGAGTCATGGCTTACTCTAAATCCAGATGCATCTGCATTTAAGAGAAATGGCCACTCAATATTTAGAGAGCTTTCCTTATTTCAAGATTACCATGGTCTTCCAGCTTTCAAAGATGTAAGTTTGTGATTGCAGTCGAATTTGACTTATATACACTGACTAACGTAACTGACTTATCATATATTTATTATTAACTTCACAACCTCACATTGTAATGCAGGCATTGGTTCAATTCATGTCTGAAATCAGAGGAAACAAAGTAAGCTTTGATTCAAATAAGCTTGTACTTACAGCTGGTGCTACTTCTGCAAATGAGACACTCATGTTTTGCCTCGCTGATCCTGGCCATGCTTTTCTCCTTCCCACTCCATACTACCCTGGGTACGTTTAGTTTACACTCACATTATTATTGATCGTCTATTTTAACACAGGGCGAACTATGTACTTTACTAATTATGATATTGTGTAATAATGCAGATTTGATAGAGACTTAAAATGGAGAACAGGAGCTGAGATTGTTCCAATACAATGCACAAGTTCAAACGGATTTAGAATCACAGAATCAGCTCTTGAAGAAGCTTATACAGAAGCCGAAAGGCGAAACCTTAGAGTGAAAGGGGTTTTAGTCACTAACCCTTCGAATCCATTAGGCACAACATTAACCAAAAAAGAACTCCAACTTCTTCTTACCTTCGTATCTACAAAACAAATCCATCTCATCAGTGATGAGATATATTCTGGCACTGTTTTTAACTCACCTAAATTCGTCAGTGTCATGGAAGTACTAATCGAAAACAACTACATGTACACTGATGTATGGGATAGAGTTCACATAGTCTATAGTCTTTCGAAAGATTTGGGACTTCCAGGATTTCGAGTTGGTGCCATTTATTCCAACGACGATAGGGTCGTCTCTGCAGCCACAAAAATGTCTAGTTTTGGATTAATTTCATCTCAAACTCAATACCTTCTTTCTGCTTTGCTATCAGACAAAAAGTTCACGAAAAATTACGTGTCTGAAAATCAAAAGAGGCTGAAAAAACGACATGAAATGCTAGTTGGTGGTCTTAAACAAATTGGAATAAGGTGCCTTGAGAGCAATGCTGGGTTGTTTTGTTGGGTGGATATGAGACATCTTTTAAGTTCAAACACATTTGATGGAGAAATGGAATTATGGAAGAAAATAGTGTACGAAGTAGGGCTAAATATTTCAGCTGGATCGTCATGCCATTGTACAGAACCGGGTTGGTTTCGTGCATGTTTTGCTAACATGTCAGAAGATACGTTAAATATCGCCATACAACGTTTGAAGGCTTTTGTTGATTCAAGGGTTAATAACAAGGATGATATTCAAAATCAGCAGCAGTGTTCTAATAAGAAGAAGTCATTTTCCAAATGGGTTTTTCGACTATCGTTCAATGAACGTCAAAGAGAACGATAGTCTAGACATACGAAAGTTACTAA</genome_strand>
        <mrna_strand>ACATAGCAACAATCTTCTCTAAATATTTTCTGCCTCTCAAAACAAACATAAAAAAATTCAAGTGCAAATGAAGCTTTTATCGAAGAAAGCCATGTGTAACTCACATGGACAAGATTCTTCCTACTTTCTAGGATGGGAAGAGTATCAGAAAAACCCATATGATGAAATTCGTAATCCTAAAGGAATCATTCAGATGGGTCTCGCAGAGAATCAGCTCTCTTTCGATTTATTAGAGTCATGGCTTACTCTAAATCCAGATGCATCTGCATTTAAGAGAAATGGCCACTCAATATTTAGAGAGCTTTCCTTATTTCAAGATTACCATGGTCTTCCAGCTTTCAAAGAT.......................................................................................................GCATTGGTTCAATTCATGTCTGAAATCAGAGGAAACAAAGTAAGCTTTGATTCAAATAAGCTTGTACTTACAGCTGGTGCTACTTCTGCAAATGAGACACTCATGTTTTGCCTCGCTGATCCTGGCCATGCTTTTCTCCTTCCCACTCCATACTACCCTGG................................................................................................ATTTGATAGAGACTTAAAATGGAGAACAGGAGCTGAGATTGTTCCAATACAATGCACAAGTTCAAACGGATTTAGAATCACAGAATCAGCTCTTGAAGAAGCTTATACAGAAGCCGAAAGGCGAAACCTTAGAGTGAAAGGGGTTTTAGTCACTAACCCTTCGAATCCATTAGGCACAACATTAACCAAAAAAGAACTCCAACTTCTTCTTACCTTCGTATCTACAAAACAAATCCATCTCATCAGTGATGAGATATATTCTGGCACTGTTTTTAACTCACCTAAATTCGTCAGTGTCATGGAAGTACTAATCGAAAACAACTACATGTACACTGATGTATGGGATAGAGTTCACATAGTCTATAGTCTTTCGAAAGATTTGGGACTTCCAGGATTTCGAGTTGGTGCCATTTATTCCAACGACGATAGGGTCGTCTCTGCAGCCACAAAAATGTCTAGTTTTGGATTAATTTCATCTCAAACTCAATACCTTCTTTCTGCTTTGCTATCAGACAAAAAGTTCACGAAAAATTACGTGTCTGAAAATCAAAAGAGGCTGAAAAAACGACATGAAATGCTAGTTGGTGGTCTTAAACAAATTGGAATAAGGTGCCTTGAGAGCAATGCTGGGTTGTTTTGTTGGGTGGATATGAGACATCTTTTAAGTTCAAACACATTTGATGGAGAAATGGAATTATGGAAGAAAATAGTGTACGAAGTAGGGCTAAATATTTCAGCTGGATCGTCATGCCATTGTACAGAACCGGGTTGGTTTCGTGCATGTTTTGCTAACATGTCAGAAGATACGTTAAATATCGCCATACAACGTTTGAAGGCTTTTGTTGATTCAAGGGTTAATAACAAGGATGATATTCAAAATCAGCAGCAGTGTTCTAATAAGAAGAAGTCATTTTCCAAATGGGTTTTTCGACTATCGTTCAATGAACGTCAAAGAGAACGATAGTCTAGCCATGTGAAAGTTCGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576971" ref_strand="+" ref_description="SGN-U576971 Tomato 200607#2 [4 ESTs aligned] ">
      <seq>ttttttgattaccaaaaataaatatatttcttaacaatttacatagctgcactgcgacaaattaaagaaacaaatgagtaaatagaatattgattaatgattaggaaatctctaattaacaaatgaactatacaagtcatttcattatagtacaaattaaaaaaaataaaaatcttaataagttttgggagatttcctaagaatctagttaatcaacaagacattaattaaaaataaattcaacaagacgatttgcatactgtactaattaattaacaagctgctgagggattagtaaaggagccgtataggtgaggaggcttggctgagttttgggcagcgccggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0284G15-om6lv/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0284G15.1" temp_strand="+" temp_description="C02HBa0284G15.1  AC215434.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0284G15 sequenced_by:kribb upload_account_name:korea">
        <position start="124681" stop="125623"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="124977" g_stop="125323" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="347" r_length="347" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0284G15.1" gen_strand="+" ref_id="SGN-U576971" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0284G15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U576971" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="124977" e_stop="125323"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACATAGATTACCAAAAATAAATATATTTCTTAACAATTTACATAGCTGCACTGCGACAAATTAAAGAAACAAATGAGTAAATAGAATATTGATTAATGATTAGGAAATCTCTAATTAACAAATGAACTATACAAGTCATTTCATTATAGTACAAATTAAAAAAAATAAAAATCTTAATAAGTTTTGGGAGATTTCCTAAGAATCTAGTTAATCAACAAGACATTAATTAAAAATAAATTCAACAAGACGATTTGCATACTGTACTAATTAATTAACAAGCTGCTGAGGGATTAGTAAAGGAGCCGTATAGGTGAGGAGGCTTGGCTGAGTTTTGGGCAGCGCCGGC</genome_strand>
        <mrna_strand>TTTTTTGATTACCAAAAATAAATATATTTCTTAACAATTTACATAGCTGCACTGCGACAAATTAAAGAAACAAATGAGTAAATAGAATATTGATTAATGATTAGGAAATCTCTAATTAACAAATGAACTATACAAGTCATTTCATTATAGTACAAATTAAAAAAAATAAAAATCTTAATAAGTTTTGGGAGATTTCCTAAGAATCTAGTTAATCAACAAGACATTAATTAAAAATAAATTCAACAAGACGATTTGCATACTGTACTAATTAATTAACAAGCTGCTGAGGGATTAGTAAAGGAGCCGTATAGGTGAGGAGGCTTGGCTGAGTTTTGGGCAGCGCCGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>29</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="3678" PGL_stop="2808"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="3678" e_stop="2808"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="3678" e_stop="2808" e_length="871"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3678" stop="2808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583921" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGACTACCGAGAGGGATGGATTACGTGCTATGGAAAATGCTGGAGGGAGTTCGGCTGTGGATAAATTTGTGTGTTTTGATCCTAATGAGAAAGGGCAAGGATTTGCAACCTGCTTGCTAAATGTTTCTGCATTCCCTGTGGGTTCTTACCAAATCAAATGGCACAGCTGTTGTATAGACAAAAATGGTGCTTACTGGAGCCTTATGCCCCTGAACACTAATCAGTTCTTCACTGTACAGGAATCTTTTAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATT</gDNA_template>
            <first_frame> G  L  P  R  G  M  D  Y  V  L  W  K  M  L  E  G  V  R  L  W  I  N  L  C  V  L  I  L  M  R  K  G  K  D  L  Q  P  A  C  *  M  F  L  H  S  L  W  V  L  T  K  S  N  G  T  A  V  V  *  T  K  M  V  L  T  G  A  L  C  P  *  T  L  I  S  S  S  L  Y  R  N  L  L  I  V  V  S  L  L  E  C  H  R  L  Q  *  F  S  *  S  *  D  D  I  S  I  I  R  T  N  N  L  K  L  I  G  E  L  P  S  V  T  W  T  Q  S  D  C  *  Q  *  C  Q  I  Y  S  H  V  Y  T  M  V  D  A  A  G  W  L  L  T  A  T  A  W  *  M  V  V  D  *  T  C  A  C  A  S  N  V  K  K  T  T  N  I  F  C  Y  M  C  V  Y  T  Q  D  Y  G  I  E  S  F  N  G  Y  R  D  N  L  R  D  H  K  A  G  S  L  H  F  Q  W  I  L  G  N  T  I  G  N  F  R  A  A  Q  A  F  K  M  I  Y  A  K  C  V  N  Y  I  V  *  R  N  Y  I  L  L  K  *  C  Q  E  S  *  N  E  S  *  I  R  I  L  F  M  L  S  K  E  E  E  K  G  *  K  L  F  Y  I  Y  *  V  L  L  L  N  I  V  N  N  I  F  L  L  Y  </first_frame>
            <second_frame>  D  Y  R  E  G  W  I  T  C  Y  G  K  C  W  R  E  F  G  C  G  *  I  C  V  F  *  S  *  *  E  R  A  R  I  C  N  L  L  A  K  C  F  C  I  P  C  G  F  L  P  N  Q  M  A  Q  L  L  Y  R  Q  K  W  C  L  L  E  P  Y  A  P  E  H  *  S  V  L  H  C  T  G  I  F  *  *  W  S  V  C  *  S  A  I  D  C  S  N  L  V  R  A  R  M  I  F  L  L  S  E  Q  T  I  *  S  L  L  V  N  C  L  V  *  H  G  P  N  L  T  V  N  N  S  A  R  F  I  A  M  F  T  L  W  L  M  L  Q  G  G  C  *  L  P  L  L  G  R  W  W  W  I  R  H  V  L  V  P  A  T  *  R  K  Q  R  T  Y  F  A  T  C  V  Y  I  L  R  I  M  E  *  N  P  S  M  A  T  G  T  T  S  G  I  T  K  L  G  A  Y  T  S  N  G  Y  *  G  I  L  *  G  I  L  E  L  H  K  R  L  K  *  Y  M  L  N  V  S  I  T  L  F  D  E  I  I  F  Y  *  N  D  V  K  N  L  K  T  R  A  R  L  E  F  Y  S  C  S  Q  K  K  K  K  K  V  E  S  C  F  I  F  I  K  Y  F  C  S  I  L  L  I  I  Y  F  Y  Y  I </second_frame>
            <third_frame>   T  T  E  R  D  G  L  R  A  M  E  N  A  G  G  S  S  A  V  D  K  F  V  C  F  D  P  N  E  K  G  Q  G  F  A  T  C  L  L  N  V  S  A  F  P  V  G  S  Y  Q  I  K  W  H  S  C  C  I  D  K  N  G  A  Y  W  S  L  M  P  L  N  T  N  Q  F  F  T  V  Q  E  S  F  N  S  G  Q  S  V  R  V  P  *  I  A  V  I  *  L  E  L  G  *  Y  F  Y  Y  Q  N  K  Q  S  E  A  Y  W  *  I  A  *  C  N  M  D  P  I  *  L  L  T  I  V  P  D  L  *  P  C  L  H  Y  G  *  C  C  R  V  A  V  N  C  H  C  L  V  D  G  G  G  L  D  M  C  L  C  Q  Q  R  E  E  N  N  E  H  I  L  L  H  V  C  I  Y  S  G  L  W  N  R  I  L  Q  W  L  Q  G  Q  P  P  G  S  Q  S  W  E  L  T  L  P  M  D  I  R  E  Y  Y  R  E  F  *  S  C  T  S  V  *  N  D  I  C  *  M  C  Q  L  H  C  L  T  K  L  Y  F  I  K  M  M  S  R  I  L  K  R  E  L  D  *  N  F  I  H  A  L  K  R  R  R  K  R  L  K  V  V  L  Y  L  L  S  T  F  A  Q  Y  C  *  *  Y  I  F  I  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3676" stop="3401"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TTERDGLRAMENAGGSSAVDKFVCFDPNEKGQGFATCLLNVSAFPVGSYQIKWHSCCIDKNGAYWSLMPLNTNQFFTVQESFNSGQSVRVP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3198" stop="2968"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TCACASNVKKTTNIFCYMCVYTQDYGIESFNGYRDNLRDHKAGSLHFQWILGNTIGNFRAAQAFKMIYAKCVNYIV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3250" stop="3023"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CCRVAVNCHCLVDGGGLDMCLCQQREENNEHILLHVCIYSGLWNRILQWLQGQPPGSQSWELTLPMDIREYYREF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="5386" PGL_stop="4550"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5386" e_stop="4550"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="5386" e_stop="4550" e_length="837"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5386" stop="4550"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565130" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAATTCTCATTATTGATCGTGTGAAGCAAATTTTGGTTAAAAAGGATTATTGGTTGTCTTATAAGCTGGCAAAATATGCGGCATGCAATGGTGCATGGTTAGTAGCTGCTTACATATTTGGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAGTTTTCAGAGATGGTTTATTACTTTAAGATCAAAGGTTGTTCGAACTGTGGCAGATGTACTAAAATTATTGAGCATGAATTTGCTTTCACAAGATGCCACCAGTACAAAACAAATAGAGGCGAGGATTTTGGTTTGGCACTCAAATTCTTCTAAAGGACTCAGCTCATTGTTGCAACTGCTTGCCCATGCTTCTTCCCAGTTCATGATGCTAGTAAAGGAATTTGATCTCTTAGCAGCGTCATTCATTGTCATGGACAGGAAAAGTATGAAGATAGTTTCTGATCTTGGATTGAGTTGTTCACTGTTAGCTTTTAGTACTGGATTGACATTACGTTTGGCCAGTTTCCGTGGTAAACAAAATTGTAGTACTTATGGTCTTGAAACTACAGACGAGCAATTTCATGCTCAGCTAGTTCATGACTTGTTAAGAAGACTTGGGTTTACAGACATAGAGACTAGCAAAAATCTGCGGCATCTTTTGGATTTC</gDNA_template>
            <first_frame> E  I  L  I  I  D  R  V  K  Q  I  L  V  K  K  D  Y  W  L  S  Y  K  L  A  K  Y  A  A  C  N  G  A  W  L  V  A  A  Y  I  F  G  E  L  I  P  M  V  Q  S  D  L  C  C  F  W  L  K  S  L  S  H  L  S  E  L  E  R  K  F  Q  L  F  G  L  T  L  S  G  N  A  A  G  E  I  M  T  A  D  Q  I  E  N  V  I  G  A  A  N  K  L  C  S  L  E  E  S  F  D  A  S  V  S  G  L  A  F  S  F  Q  R  W  F  I  T  L  R  S  K  V  V  R  T  V  A  D  V  L  K  L  L  S  M  N  L  L  S  Q  D  A  T  S  T  K  Q  I  E  A  R  I  L  V  W  H  S  N  S  S  K  G  L  S  S  L  L  Q  L  L  A  H  A  S  S  Q  F  M  M  L  V  K  E  F  D  L  L  A  A  S  F  I  V  M  D  R  K  S  M  K  I  V  S  D  L  G  L  S  C  S  L  L  A  F  S  T  G  L  T  L  R  L  A  S  F  R  G  K  Q  N  C  S  T  Y  G  L  E  T  T  D  E  Q  F  H  A  Q  L  V  H  D  L  L  R  R  L  G  F  T  D  I  E  T  S  K  N  L  R  H  L  L  D  F </first_frame>
            <second_frame>  K  F  S  L  L  I  V  *  S  K  F  W  L  K  R  I  I  G  C  L  I  S  W  Q  N  M  R  H  A  M  V  H  G  *  *  L  L  T  Y  L  G  S  *  Y  L  W  S  N  L  I  S  V  V  F  G  *  N  P  Y  P  I  F  Q  N  *  K  G  N  F  S  C  S  G  L  L  F  L  E  M  Q  L  G  K  L  *  Q  L  I  R  L  K  M  L  L  G  P  P  T  S  F  V  L  *  R  N  L  L  M  P  L  F  L  V  L  L  L  V  F  R  D  G  L  L  L  *  D  Q  R  L  F  E  L  W  Q  M  Y  *  N  Y  *  A  *  I  C  F  H  K  M  P  P  V  Q  N  K  *  R  R  G  F  W  F  G  T  Q  I  L  L  K  D  S  A  H  C  C  N  C  L  P  M  L  L  P  S  S  *  C  *  *  R  N  L  I  S  *  Q  R  H  S  L  S  W  T  G  K  V  *  R  *  F  L  I  L  D  *  V  V  H  C  *  L  L  V  L  D  *  H  Y  V  W  P  V  S  V  V  N  K  I  V  V  L  M  V  L  K  L  Q  T  S  N  F  M  L  S  *  F  M  T  C  *  E  D  L  G  L  Q  T  *  R  L  A  K  I  C  G  I  F  W  I   </second_frame>
            <third_frame>   N  S  H  Y  *  S  C  E  A  N  F  G  *  K  G  L  L  V  V  L  *  A  G  K  I  C  G  M  Q  W  C  M  V  S  S  C  L  H  I  W  G  A  N  T  Y  G  P  I  *  S  L  L  F  L  V  K  I  L  I  P  S  F  R  I  R  K  E  I  S  V  V  R  A  Y  S  F  W  K  C  S  W  G  N  Y  D  S  *  S  D  *  K  C  Y  W  G  R  Q  Q  A  L  F  F  R  G  I  F  *  C  L  C  F  W  S  C  F  *  F  S  E  M  V  Y  Y  F  K  I  K  G  C  S  N  C  G  R  C  T  K  I  I  E  H  E  F  A  F  T  R  C  H  Q  Y  K  T  N  R  G  E  D  F  G  L  A  L  K  F  F  *  R  T  Q  L  I  V  A  T  A  C  P  C  F  F  P  V  H  D  A  S  K  G  I  *  S  L  S  S  V  I  H  C  H  G  Q  E  K  Y  E  D  S  F  *  S  W  I  E  L  F  T  V  S  F  *  Y  W  I  D  I  T  F  G  Q  F  P  W  *  T  K  L  *  Y  L  W  S  *  N  Y  R  R  A  I  S  C  S  A  S  S  *  L  V  K  K  T  W  V  Y  R  H  R  D  *  Q  K  S  A  A  S  F  G  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5386" stop="4550"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>837</number_coding_nucleotides>
                  <number_encoded_amino_acids>279</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EILIIDRVKQILVKKDYWLSYKLAKYAACNGAWLVAAYIFGELIPMVQSDLCCFWLKSLSHLSELERKFQLFGLTLSGNAAGEIMTADQIENVIGAANKLCSLEESFDASVSGLAFSFQRWFITLRSKVVRTVADVLKLLSMNLLSQDATSTKQIEARILVWHSNSSKGLSSLLQLLAHASSQFMMLVKEFDLLAASFIVMDRKSMKIVSDLGLSCSLLAFSTGLTLRLASFRGKQNCSTYGLETTDEQFHAQLVHDLLRRLGFTDIETSKNLRHLLDF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="9580" PGL_stop="8929"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9580" e_stop="8929"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="9580" e_stop="8929" e_length="652"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9580" stop="8929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600851" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTATCTACAGGCAAAGGCTTCTTTGTTTGCAGCCGGATGCTTTTCTGAACTGGCAGATGATTTTGCTTATGTATTTCTGGAGATGCTTGGAGGTCTGTTGGTCTCATCTGAAACATCAAGGGCTATAAGGTTAGCTGGAGGACGTGCTTTTGCTAAAATGTGGTGCCCAATTTTACTAGCAGATATAGCTCATAAGGTTCAGTATTTCTCTTTAATATGAGTTTCTGCCACCAAATACATGTAAATTTTCTTATTGCACCTGTGACTCATTCCATGGACCCCCTATCCTTCTGTCCCTTTCCGCTCTATTCTAAAAGAACTTGTTTTTTGAAAAAGCACTGTTCAGAAACCATGTAAATACTCATATAGATGACAAAATTATGCATAGTGAAATGCAATGTTTTTCTTTTTCATGCATGACATGCAAGTGATCATCTCTGAACTAATTGTGACTATTGCTCTAGTTTTTGTTACAAGTTCCTCAAAATAAGTTTTTAATGATACCAGGCCGATCTGTATTGTCTGACAATTTGCTTAAATGATGAAGAAGTGAGTTCAGATTTCTATTGCAGCACTAAAATTGACTTTTTCATATTGCAGACTGGTGTGAAGCTTATCCTAGAATCTTCGGAAGAAGAATTCTCTTTGGTGA</gDNA_template>
            <first_frame> L  S  T  G  K  G  F  F  V  C  S  R  M  L  F  *  T  G  R  *  F  C  L  C  I  S  G  D  A  W  R  S  V  G  L  I  *  N  I  K  G  Y  K  V  S  W  R  T  C  F  C  *  N  V  V  P  N  F  T  S  R  Y  S  S  *  G  S  V  F  L  F  N  M  S  F  C  H  Q  I  H  V  N  F  L  I  A  P  V  T  H  S  M  D  P  L  S  F  C  P  F  P  L  Y  S  K  R  T  C  F  L  K  K  H  C  S  E  T  M  *  I  L  I  *  M  T  K  L  C  I  V  K  C  N  V  F  L  F  H  A  *  H  A  S  D  H  L  *  T  N  C  D  Y  C  S  S  F  C  Y  K  F  L  K  I  S  F  *  *  Y  Q  A  D  L  Y  C  L  T  I  C  L  N  D  E  E  V  S  S  D  F  Y  C  S  T  K  I  D  F  F  I  L  Q  T  G  V  K  L  I  L  E  S  S  E  E  E  F  S  L  V  </first_frame>
            <second_frame>  Y  L  Q  A  K  A  S  L  F  A  A  G  C  F  S  E  L  A  D  D  F  A  Y  V  F  L  E  M  L  G  G  L  L  V  S  S  E  T  S  R  A  I  R  L  A  G  G  R  A  F  A  K  M  W  C  P  I  L  L  A  D  I  A  H  K  V  Q  Y  F  S  L  I  *  V  S  A  T  K  Y  M  *  I  F  L  L  H  L  *  L  I  P  W  T  P  Y  P  S  V  P  F  R  S  I  L  K  E  L  V  F  *  K  S  T  V  Q  K  P  C  K  Y  S  Y  R  *  Q  N  Y  A  *  *  N  A  M  F  F  F  F  M  H  D  M  Q  V  I  I  S  E  L  I  V  T  I  A  L  V  F  V  T  S  S  S  K  *  V  F  N  D  T  R  P  I  C  I  V  *  Q  F  A  *  M  M  K  K  *  V  Q  I  S  I  A  A  L  K  L  T  F  S  Y  C  R  L  V  *  S  L  S  *  N  L  R  K  K  N  S  L  W  * </second_frame>
            <third_frame>   I  Y  R  Q  R  L  L  C  L  Q  P  D  A  F  L  N  W  Q  M  I  L  L  M  Y  F  W  R  C  L  E  V  C  W  S  H  L  K  H  Q  G  L  *  G  *  L  E  D  V  L  L  L  K  C  G  A  Q  F  Y  *  Q  I  *  L  I  R  F  S  I  S  L  *  Y  E  F  L  P  P  N  T  C  K  F  S  Y  C  T  C  D  S  F  H  G  P  P  I  L  L  S  L  S  A  L  F  *  K  N  L  F  F  E  K  A  L  F  R  N  H  V  N  T  H  I  D  D  K  I  M  H  S  E  M  Q  C  F  S  F  S  C  M  T  C  K  *  S  S  L  N  *  L  *  L  L  L  *  F  L  L  Q  V  P  Q  N  K  F  L  M  I  P  G  R  S  V  L  S  D  N  L  L  K  *  *  R  S  E  F  R  F  L  L  Q  H  *  N  *  L  F  H  I  A  D  W  C  E  A  Y  P  R  I  F  G  R  R  I  L  F  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9579" stop="9361"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YLQAKASLFAAGCFSELADDFAYVFLEMLGGLLVSSETSRAIRLAGGRAFAKMWCPILLADIAHKVQYFSLI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="15282" PGL_stop="14412"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15282" e_stop="14412"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="15282" e_stop="14412" e_length="871"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15282" stop="14412"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583921" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGACTACCGAGAGGGATGGATTACGTGCTATGGAAAATGCTGGAGGGAGTTCGGCTGTGGATAAATTTGTGTGTTTTGATCCTAATGAGAAAGGGCAAGGATTTGCAACCTGCTTGCTAAATGTTTCTGCATTCCCTGTGGGTTCTTACCAAATCAAATGGCACAGCTGTTGTATAGACAAAAATGGTGCTTACTGGAGCCTTATGCCCCTGAACACTAATCAGTTCTTCACTGTACAGGAATCTTTTAATAGTGGTCAGTCTGTTAGAGTGCCATAGATTGCAGTAATTTAGTTAGAGCTAGGATGATATTTCTATTATCAGAACAAACAATCTGAAGCTTATTGGTGAATTGCCTAGTGTAACATGGACCCAATCTGACTGTTAACAATAGTGCCAGATTTATAGCCATGTTTACACTATGGTTGATGCTGCAGGGTGGCTGTTAACTGCCACTGCTTGGTAGATGGTGGTGGATTAGACATGTGCTTGTGCCAGCAACGTGAAGAAAACAACGAACATATTTTGCTACATGTGTGTATATACTCAGGATTATGGAATAGAATCCTTCAATGGCTACAGGGACAACCTCCGGGATCACAAAGCTGGGAGCTTACACTTCCAATGGATATTAGGGAATACTATAGGGAATTTTAGAGCTGCACAAGCGTTTAAAATGATATATGCTAAATGTGTCAATTACATTGTTTGACGAAATTATATTTTATTAAAATGATGTCAAGAATCTTAAAACGAGAGCTAGATTAGAATTTTATTCATGCTCTCAAAAGAAGAAGAAAAAGGTTGAAAGTTGTTTTATATTTATTAAGTACTTTTGCTCAATATTGTTAATAATATATTTTTATTATATT</gDNA_template>
            <first_frame> G  L  P  R  G  M  D  Y  V  L  W  K  M  L  E  G  V  R  L  W  I  N  L  C  V  L  I  L  M  R  K  G  K  D  L  Q  P  A  C  *  M  F  L  H  S  L  W  V  L  T  K  S  N  G  T  A  V  V  *  T  K  M  V  L  T  G  A  L  C  P  *  T  L  I  S  S  S  L  Y  R  N  L  L  I  V  V  S  L  L  E  C  H  R  L  Q  *  F  S  *  S  *  D  D  I  S  I  I  R  T  N  N  L  K  L  I  G  E  L  P  S  V  T  W  T  Q  S  D  C  *  Q  *  C  Q  I  Y  S  H  V  Y  T  M  V  D  A  A  G  W  L  L  T  A  T  A  W  *  M  V  V  D  *  T  C  A  C  A  S  N  V  K  K  T  T  N  I  F  C  Y  M  C  V  Y  T  Q  D  Y  G  I  E  S  F  N  G  Y  R  D  N  L  R  D  H  K  A  G  S  L  H  F  Q  W  I  L  G  N  T  I  G  N  F  R  A  A  Q  A  F  K  M  I  Y  A  K  C  V  N  Y  I  V  *  R  N  Y  I  L  L  K  *  C  Q  E  S  *  N  E  S  *  I  R  I  L  F  M  L  S  K  E  E  E  K  G  *  K  L  F  Y  I  Y  *  V  L  L  L  N  I  V  N  N  I  F  L  L  Y  </first_frame>
            <second_frame>  D  Y  R  E  G  W  I  T  C  Y  G  K  C  W  R  E  F  G  C  G  *  I  C  V  F  *  S  *  *  E  R  A  R  I  C  N  L  L  A  K  C  F  C  I  P  C  G  F  L  P  N  Q  M  A  Q  L  L  Y  R  Q  K  W  C  L  L  E  P  Y  A  P  E  H  *  S  V  L  H  C  T  G  I  F  *  *  W  S  V  C  *  S  A  I  D  C  S  N  L  V  R  A  R  M  I  F  L  L  S  E  Q  T  I  *  S  L  L  V  N  C  L  V  *  H  G  P  N  L  T  V  N  N  S  A  R  F  I  A  M  F  T  L  W  L  M  L  Q  G  G  C  *  L  P  L  L  G  R  W  W  W  I  R  H  V  L  V  P  A  T  *  R  K  Q  R  T  Y  F  A  T  C  V  Y  I  L  R  I  M  E  *  N  P  S  M  A  T  G  T  T  S  G  I  T  K  L  G  A  Y  T  S  N  G  Y  *  G  I  L  *  G  I  L  E  L  H  K  R  L  K  *  Y  M  L  N  V  S  I  T  L  F  D  E  I  I  F  Y  *  N  D  V  K  N  L  K  T  R  A  R  L  E  F  Y  S  C  S  Q  K  K  K  K  K  V  E  S  C  F  I  F  I  K  Y  F  C  S  I  L  L  I  I  Y  F  Y  Y  I </second_frame>
            <third_frame>   T  T  E  R  D  G  L  R  A  M  E  N  A  G  G  S  S  A  V  D  K  F  V  C  F  D  P  N  E  K  G  Q  G  F  A  T  C  L  L  N  V  S  A  F  P  V  G  S  Y  Q  I  K  W  H  S  C  C  I  D  K  N  G  A  Y  W  S  L  M  P  L  N  T  N  Q  F  F  T  V  Q  E  S  F  N  S  G  Q  S  V  R  V  P  *  I  A  V  I  *  L  E  L  G  *  Y  F  Y  Y  Q  N  K  Q  S  E  A  Y  W  *  I  A  *  C  N  M  D  P  I  *  L  L  T  I  V  P  D  L  *  P  C  L  H  Y  G  *  C  C  R  V  A  V  N  C  H  C  L  V  D  G  G  G  L  D  M  C  L  C  Q  Q  R  E  E  N  N  E  H  I  L  L  H  V  C  I  Y  S  G  L  W  N  R  I  L  Q  W  L  Q  G  Q  P  P  G  S  Q  S  W  E  L  T  L  P  M  D  I  R  E  Y  Y  R  E  F  *  S  C  T  S  V  *  N  D  I  C  *  M  C  Q  L  H  C  L  T  K  L  Y  F  I  K  M  M  S  R  I  L  K  R  E  L  D  *  N  F  I  H  A  L  K  R  R  R  K  R  L  K  V  V  L  Y  L  L  S  T  F  A  Q  Y  C  *  *  Y  I  F  I  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15280" stop="15005"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TTERDGLRAMENAGGSSAVDKFVCFDPNEKGQGFATCLLNVSAFPVGSYQIKWHSCCIDKNGAYWSLMPLNTNQFFTVQESFNSGQSVRVP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14802" stop="14572"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TCACASNVKKTTNIFCYMCVYTQDYGIESFNGYRDNLRDHKAGSLHFQWILGNTIGNFRAAQAFKMIYAKCVNYIV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14854" stop="14627"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CCRVAVNCHCLVDGGGLDMCLCQQREENNEHILLHVCIYSGLWNRILQWLQGQPPGSQSWELTLPMDIREYYREF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="16990" PGL_stop="16154"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16990" e_stop="16154"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="16990" e_stop="16154" e_length="837"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16990" stop="16154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565130" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAATTCTCATTATTGATCGTGTGAAGCAAATTTTGGTTAAAAAGGATTATTGGTTGTCTTATAAGCTGGCAAAATATGCGGCATGCAATGGTGCATGGTTAGTAGCTGCTTACATATTTGGGGAGCTAATACCTATGGTCCAATCTGATCTCTGTTGTTTTTGGTTAAAATCCTTATCCCATCTTTCAGAATTAGAAAGGAAATTTCAGTTGTTCGGGCTTACTCTTTCTGGAAATGCAGCTGGGGAAATTATGACAGCTGATCAGATTGAAAATGTTATTGGGGCCGCCAACAAGCTTTGTTCTTTAGAGGAATCTTTTGATGCCTCTGTTTCTGGTCTTGCTTTTAGTTTTCAGAGATGGTTTATTACTTTAAGATCAAAGGTTGTTCGAACTGTGGCAGATGTACTAAAATTATTGAGCATGAATTTGCTTTCACAAGATGCCACCAGTACAAAACAAATAGAGGCGAGGATTTTGGTTTGGCACTCAAATTCTTCTAAAGGACTCAGCTCATTGTTGCAACTGCTTGCCCATGCTTCTTCCCAGTTCATGATGCTAGTAAAGGAATTTGATCTCTTAGCAGCGTCATTCATTGTCATGGACAGGAAAAGTATGAAGATAGTTTCTGATCTTGGATTGAGTTGTTCACTGTTAGCTTTTAGTACTGGATTGACATTACGTTTGGCCAGTTTCCGTGGTAAACAAAATTGTAGTACTTATGGTCTTGAAACTACAGACGAGCAATTTCATGCTCAGCTAGTTCATGACTTGTTAAGAAGACTTGGGTTTACAGACATAGAGACTAGCAAAAATCTGCGGCATCTTTTGGATTTC</gDNA_template>
            <first_frame> E  I  L  I  I  D  R  V  K  Q  I  L  V  K  K  D  Y  W  L  S  Y  K  L  A  K  Y  A  A  C  N  G  A  W  L  V  A  A  Y  I  F  G  E  L  I  P  M  V  Q  S  D  L  C  C  F  W  L  K  S  L  S  H  L  S  E  L  E  R  K  F  Q  L  F  G  L  T  L  S  G  N  A  A  G  E  I  M  T  A  D  Q  I  E  N  V  I  G  A  A  N  K  L  C  S  L  E  E  S  F  D  A  S  V  S  G  L  A  F  S  F  Q  R  W  F  I  T  L  R  S  K  V  V  R  T  V  A  D  V  L  K  L  L  S  M  N  L  L  S  Q  D  A  T  S  T  K  Q  I  E  A  R  I  L  V  W  H  S  N  S  S  K  G  L  S  S  L  L  Q  L  L  A  H  A  S  S  Q  F  M  M  L  V  K  E  F  D  L  L  A  A  S  F  I  V  M  D  R  K  S  M  K  I  V  S  D  L  G  L  S  C  S  L  L  A  F  S  T  G  L  T  L  R  L  A  S  F  R  G  K  Q  N  C  S  T  Y  G  L  E  T  T  D  E  Q  F  H  A  Q  L  V  H  D  L  L  R  R  L  G  F  T  D  I  E  T  S  K  N  L  R  H  L  L  D  F </first_frame>
            <second_frame>  K  F  S  L  L  I  V  *  S  K  F  W  L  K  R  I  I  G  C  L  I  S  W  Q  N  M  R  H  A  M  V  H  G  *  *  L  L  T  Y  L  G  S  *  Y  L  W  S  N  L  I  S  V  V  F  G  *  N  P  Y  P  I  F  Q  N  *  K  G  N  F  S  C  S  G  L  L  F  L  E  M  Q  L  G  K  L  *  Q  L  I  R  L  K  M  L  L  G  P  P  T  S  F  V  L  *  R  N  L  L  M  P  L  F  L  V  L  L  L  V  F  R  D  G  L  L  L  *  D  Q  R  L  F  E  L  W  Q  M  Y  *  N  Y  *  A  *  I  C  F  H  K  M  P  P  V  Q  N  K  *  R  R  G  F  W  F  G  T  Q  I  L  L  K  D  S  A  H  C  C  N  C  L  P  M  L  L  P  S  S  *  C  *  *  R  N  L  I  S  *  Q  R  H  S  L  S  W  T  G  K  V  *  R  *  F  L  I  L  D  *  V  V  H  C  *  L  L  V  L  D  *  H  Y  V  W  P  V  S  V  V  N  K  I  V  V  L  M  V  L  K  L  Q  T  S  N  F  M  L  S  *  F  M  T  C  *  E  D  L  G  L  Q  T  *  R  L  A  K  I  C  G  I  F  W  I   </second_frame>
            <third_frame>   N  S  H  Y  *  S  C  E  A  N  F  G  *  K  G  L  L  V  V  L  *  A  G  K  I  C  G  M  Q  W  C  M  V  S  S  C  L  H  I  W  G  A  N  T  Y  G  P  I  *  S  L  L  F  L  V  K  I  L  I  P  S  F  R  I  R  K  E  I  S  V  V  R  A  Y  S  F  W  K  C  S  W  G  N  Y  D  S  *  S  D  *  K  C  Y  W  G  R  Q  Q  A  L  F  F  R  G  I  F  *  C  L  C  F  W  S  C  F  *  F  S  E  M  V  Y  Y  F  K  I  K  G  C  S  N  C  G  R  C  T  K  I  I  E  H  E  F  A  F  T  R  C  H  Q  Y  K  T  N  R  G  E  D  F  G  L  A  L  K  F  F  *  R  T  Q  L  I  V  A  T  A  C  P  C  F  F  P  V  H  D  A  S  K  G  I  *  S  L  S  S  V  I  H  C  H  G  Q  E  K  Y  E  D  S  F  *  S  W  I  E  L  F  T  V  S  F  *  Y  W  I  D  I  T  F  G  Q  F  P  W  *  T  K  L  *  Y  L  W  S  *  N  Y  R  R  A  I  S  C  S  A  S  S  *  L  V  K  K  T  W  V  Y  R  H  R  D  *  Q  K  S  A  A  S  F  G  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16990" stop="16154"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>837</number_coding_nucleotides>
                  <number_encoded_amino_acids>279</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EILIIDRVKQILVKKDYWLSYKLAKYAACNGAWLVAAYIFGELIPMVQSDLCCFWLKSLSHLSELERKFQLFGLTLSGNAAGEIMTADQIENVIGAANKLCSLEESFDASVSGLAFSFQRWFITLRSKVVRTVADVLKLLSMNLLSQDATSTKQIEARILVWHSNSSKGLSSLLQLLAHASSQFMMLVKEFDLLAASFIVMDRKSMKIVSDLGLSCSLLAFSTGLTLRLASFRGKQNCSTYGLETTDEQFHAQLVHDLLRRLGFTDIETSKNLRHLLDF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="21184" PGL_stop="20533"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21184" e_stop="20533"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="21184" e_stop="20533" e_length="652"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21184" stop="20533"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600851" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTATCTACAGGCAAAGGCTTCTTTGTTTGCAGCCGGATGCTTTTCTGAACTGGCAGATGATTTTGCTTATGTATTTCTGGAGATGCTTGGAGGTCTGTTGGTCTCATCTGAAACATCAAGGGCTATAAGGTTAGCTGGAGGACGTGCTTTTGCTAAAATGTGGTGCCCAATTTTACTAGCAGATATAGCTCATAAGGTTCAGTATTTCTCTTTAATATGAGTTTCTGCCACCAAATACATGTAAATTTTCTTATTGCACCTGTGACTCATTCCATGGACCCCCTATCCTTCTGTCCCTTTCCGCTCTATTCTAAAAGAACTTGTTTTTTGAAAAAGCACTGTTCAGAAACCATGTAAATACTCATATAGATGACAAAATTATGCATAGTGAAATGCAATGTTTTTCTTTTTCATGCATGACATGCAAGTGATCATCTCTGAACTAATTGTGACTATTGCTCTAGTTTTTGTTACAAGTTCCTCAAAATAAGTTTTTAATGATACCAGGCCGATCTGTATTGTCTGACAATTTGCTTAAATGATGAAGAAGTGAGTTCAGATTTCTATTGCAGCACTAAAATTGACTTTTTCATATTGCAGACTGGTGTGAAGCTTATCCTAGAATCTTCGGAAGAAGAATTCTCTTTGGTGA</gDNA_template>
            <first_frame> L  S  T  G  K  G  F  F  V  C  S  R  M  L  F  *  T  G  R  *  F  C  L  C  I  S  G  D  A  W  R  S  V  G  L  I  *  N  I  K  G  Y  K  V  S  W  R  T  C  F  C  *  N  V  V  P  N  F  T  S  R  Y  S  S  *  G  S  V  F  L  F  N  M  S  F  C  H  Q  I  H  V  N  F  L  I  A  P  V  T  H  S  M  D  P  L  S  F  C  P  F  P  L  Y  S  K  R  T  C  F  L  K  K  H  C  S  E  T  M  *  I  L  I  *  M  T  K  L  C  I  V  K  C  N  V  F  L  F  H  A  *  H  A  S  D  H  L  *  T  N  C  D  Y  C  S  S  F  C  Y  K  F  L  K  I  S  F  *  *  Y  Q  A  D  L  Y  C  L  T  I  C  L  N  D  E  E  V  S  S  D  F  Y  C  S  T  K  I  D  F  F  I  L  Q  T  G  V  K  L  I  L  E  S  S  E  E  E  F  S  L  V  </first_frame>
            <second_frame>  Y  L  Q  A  K  A  S  L  F  A  A  G  C  F  S  E  L  A  D  D  F  A  Y  V  F  L  E  M  L  G  G  L  L  V  S  S  E  T  S  R  A  I  R  L  A  G  G  R  A  F  A  K  M  W  C  P  I  L  L  A  D  I  A  H  K  V  Q  Y  F  S  L  I  *  V  S  A  T  K  Y  M  *  I  F  L  L  H  L  *  L  I  P  W  T  P  Y  P  S  V  P  F  R  S  I  L  K  E  L  V  F  *  K  S  T  V  Q  K  P  C  K  Y  S  Y  R  *  Q  N  Y  A  *  *  N  A  M  F  F  F  F  M  H  D  M  Q  V  I  I  S  E  L  I  V  T  I  A  L  V  F  V  T  S  S  S  K  *  V  F  N  D  T  R  P  I  C  I  V  *  Q  F  A  *  M  M  K  K  *  V  Q  I  S  I  A  A  L  K  L  T  F  S  Y  C  R  L  V  *  S  L  S  *  N  L  R  K  K  N  S  L  W  * </second_frame>
            <third_frame>   I  Y  R  Q  R  L  L  C  L  Q  P  D  A  F  L  N  W  Q  M  I  L  L  M  Y  F  W  R  C  L  E  V  C  W  S  H  L  K  H  Q  G  L  *  G  *  L  E  D  V  L  L  L  K  C  G  A  Q  F  Y  *  Q  I  *  L  I  R  F  S  I  S  L  *  Y  E  F  L  P  P  N  T  C  K  F  S  Y  C  T  C  D  S  F  H  G  P  P  I  L  L  S  L  S  A  L  F  *  K  N  L  F  F  E  K  A  L  F  R  N  H  V  N  T  H  I  D  D  K  I  M  H  S  E  M  Q  C  F  S  F  S  C  M  T  C  K  *  S  S  L  N  *  L  *  L  L  L  *  F  L  L  Q  V  P  Q  N  K  F  L  M  I  P  G  R  S  V  L  S  D  N  L  L  K  *  *  R  S  E  F  R  F  L  L  Q  H  *  N  *  L  F  H  I  A  D  W  C  E  A  Y  P  R  I  F  G  R  R  I  L  F  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21183" stop="20965"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YLQAKASLFAAGCFSELADDFAYVFLEMLGGLLVSSETSRAIRLAGGRAFAKMWCPILLADIAHKVQYFSLI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="34319" PGL_stop="25576"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34319" e_stop="34229"/>
            <exon e_start="31707" e_stop="31491"/>
            <exon e_start="29941" e_stop="29784"/>
            <exon e_start="29676" e_stop="29531"/>
            <exon e_start="27486" e_stop="27424"/>
            <exon e_start="27323" e_stop="27227"/>
            <exon e_start="26910" e_stop="26749"/>
            <exon e_start="26625" e_stop="26519"/>
            <exon e_start="26344" e_stop="26223"/>
            <exon e_start="26147" e_stop="25576"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.757" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.816" acc_prob="0.859" e_score="1.000"/>
          <exon-intron don_prob="0.908" acc_prob="0.005" e_score="0.994"/>
          <exon-intron don_prob="0.953" acc_prob="0.505" e_score="1.000"/>
          <exon-intron don_prob="0.617" acc_prob="0.759" e_score="0.992"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="34319" e_stop="34229" e_length="91"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.981">
            <gDNA_intron_boundary i_start="34228" i_stop="31708" i_length="2521"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="31707" e_stop="31491" e_length="217"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="31490" i_stop="29942" i_length="1549"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="29941" e_stop="29784" e_length="158"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="29783" i_stop="29677" i_length="107"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29676" e_stop="29531" e_length="146"/>
          </exon>
          <intron i_serial="4" don_prob="0.994" acc_prob="0.996">
            <gDNA_intron_boundary i_start="29530" i_stop="27487" i_length="2044"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="27486" e_stop="27424" e_length="63"/>
          </exon>
          <intron i_serial="5" don_prob="0.757" acc_prob="0.964">
            <gDNA_intron_boundary i_start="27423" i_stop="27324" i_length="100"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="27323" e_stop="27227" e_length="97"/>
          </exon>
          <intron i_serial="6" don_prob="0.816" acc_prob="0.859">
            <gDNA_intron_boundary i_start="27226" i_stop="26911" i_length="316"/>
          </intron>
          <exon e_serial="7" e_score="0.994">
            <gDNA_exon_boundary e_start="26910" e_stop="26749" e_length="162"/>
          </exon>
          <intron i_serial="7" don_prob="0.908" acc_prob="0.005">
            <gDNA_intron_boundary i_start="26748" i_stop="26626" i_length="123"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="26625" e_stop="26519" e_length="107"/>
          </exon>
          <intron i_serial="8" don_prob="0.953" acc_prob="0.505">
            <gDNA_intron_boundary i_start="26518" i_stop="26345" i_length="174"/>
          </intron>
          <exon e_serial="9" e_score="0.992">
            <gDNA_exon_boundary e_start="26344" e_stop="26223" e_length="122"/>
          </exon>
          <intron i_serial="9" don_prob="0.617" acc_prob="0.759">
            <gDNA_intron_boundary i_start="26222" i_stop="26148" i_length="75"/>
          </intron>
          <exon e_serial="10" e_score="0.995">
            <gDNA_exon_boundary e_start="26147" e_stop="25576" e_length="572"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34319" stop="34229"/>
              <exon start="31707" stop="31491"/>
              <exon start="29941" stop="29784"/>
              <exon start="29676" stop="29531"/>
              <exon start="27486" stop="27424"/>
              <exon start="27323" stop="27247"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583610" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27428" stop="27424"/>
              <exon start="27323" stop="27227"/>
              <exon start="26910" stop="26749"/>
              <exon start="26625" stop="26519"/>
              <exon start="26344" stop="26223"/>
              <exon start="26147" stop="26138"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588093" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26847" stop="26749"/>
              <exon start="26625" stop="26519"/>
              <exon start="26344" stop="26223"/>
              <exon start="26147" stop="25576"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583609" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTAGCAATTCCTTCGCGTGGAGTATTTGCTCTTCTTCTATGGCTCCTCGTCGCATTAACCTCCATAGTCCGCGCTGATGAACTTTCTTTAG : TTGTATCTCAATCTACCACGCTGCAGATATCTCCAGGAATAGTAGTGGAAAATTCTCCTGGCTCTAAGCCAGGAACGAAAGTTATTTGTGAGAGAGTTCAGATCCATGGATTGTCAAGGCTAAAAAGTCTAAGAAAGTATGCCCATTCAGTAAAGGTGAATGTGTCATATCTGAATCCAAGTGGGCGTCCACCTAATGCTGAGGTCTGTTTCCATAG : GAATCAATCCGTGGCAATTGGGATGTGTCCGCCAGGCCAATGGATGAAAATAACCAAGGGTTCATGGGTGCGATCAATGTCACCTTTCGAGCACAGGTTTTTGGATATTAGGATGACAGGCTCATCTAAGGACACTTTTCAGGTCTCGCTGCACGAAG : ATTTTTATTTGTATCGTGTTGTGTTTCTGGTATTGGGTATATTGCTACTTGCTCTGGCATCCTTCCTTAGCAAGTCTCTAGTATTTTTCTATGGTGGTGCGATGGCAGTAGGGGTTATTCTTGTGATACTGATGGTCCTTTTCCAG : GGAATGAAGCTTCTTCCGACTGGTAGGAAGAGTTCACTAGCAATATTCTTGTATTCATCCATT : GTTGGTGTAGGATCTTTCATTCTAAGCTATGTGCCCCAATTGTTGCGTTCAATACTGCGCGAGATTGGTGTTGGTGAAGACATGTACAACCCTGTAT : CTGGCAATATTTCTGCTGCTTTTCCTTGTGATTGCTGGAGCTTGGTTGGGGTTTTGGGTTGTTCACAAACTCGTACTTGAAGAAGATGGATCAATTGACACCGGAGTATCTCAATTTGTTGCTTGGTCCATTCGATTTCTCGCTTCTGCGTTGATTCTTCAG : AGTTCTGTGGATCCTTTATTGTGTGCCGAGGCATGGATATGTGGAGTTCTGATCTCATCAATCTTGAGGAGACTATGCCGTCCCAAATATGTTCTGCGCTTTTTCAA : GAATTTGTCACAAATAGACACGAGTTATCTCTGGGAATCTCAGGAATTGTACGCATCACCGACAAAAGGGTCATATGATTCCAGGACGTTCAAGACAAATCTAAATGGCACAATCCGCCCAG : GTTTTCCTCTCAAGCCACGAAGTTTGTTGTCAGAAAAAGATACTTACTATTCTACTTTCCATAAAACTCCTGAACAGAAGAAGCTTTCAAAGGATGAGTATGACAAGATAACTAAAGACACCACAAAGAAGGCTATGGAAGAGCTTGTTTCTTCCCCGGATTTTAGCAAATGGGCTGTTGCTCACGCAGATAGGATTACTCTTGCTCCAAAGAAAGAGACAACTGCTAGGCAGAGAAGGTGGTACCAATGGCTATGACTTGAAAATGTGATTATAGTGGCGGAGAACTTAGGTGTCCAGACTTGTTGTAATGTGTTCCGCGTTTTTCACGTAGGTAGTGATCTTTTTTTTTTTTAAGTATGTCTTATGCTGTAGTTCTCCACATAAAAAAAGGTTTGTATTATGGTGTGATTACATTCTTATTACTCTGAGCTAGTGTAACATTATTGACTTTTACAAGGCACTGAAACTGACTGCTTCAAGGACTGTGCTTTAATGTTTAATGAATGTAACAACTGGATAGTGGAGATAACATTTTGCCACTGTAAATGTCTTGATGCTTTGATGTTACTG</gDNA_template>
            <first_frame> V  A  I  P  S  R  G  V  F  A  L  L  L  W  L  L  V  A  L  T  S  I  V  R  A  D  E  L  S  L   : V  V  S  Q  S  T  T  L  Q  I  S  P  G  I  V  V  E  N  S  P  G  S  K  P  G  T  K  V  I  C  E  R  V  Q  I  H  G  L  S  R  L  K  S  L  R  K  Y  A  H  S  V  K  V  N  V  S  Y  L  N  P  S  G  R  P  P  N  A  E  V  C  F  H  R :   N  Q  S  V  A  I  G  M  C  P  P  G  Q  W  M  K  I  T  K  G  S  W  V  R  S  M  S  P  F  E  H  R  F  L  D  I  R  M  T  G  S  S  K  D  T  F  Q  V  S  L  H  E   : D  F  Y  L  Y  R  V  V  F  L  V  L  G  I  L  L  L  A  L  A  S  F  L  S  K  S  L  V  F  F  Y  G  G  A  M  A  V  G  V  I  L  V  I  L  M  V  L  F  Q  :  G  M  K  L  L  P  T  G  R  K  S  S  L  A  I  F  L  Y  S  S  I  :  V  G  V  G  S  F  I  L  S  Y  V  P  Q  L  L  R  S  I  L  R  E  I  G  V  G  E  D  M  Y  N  P  V   : S  G  N  I  S  A  A  F  P  C  D  C  W  S  L  V  G  V  L  G  C  S  Q  T  R  T  *  R  R  W  I  N  *  H  R  S  I  S  I  C  C  L  V  H  S  I  S  R  F  C  V  D  S  S   : E  F  C  G  S  F  I  V  C  R  G  M  D  M  W  S  S  D  L  I  N  L  E  E  T  M  P  S  Q  I  C  S  A  L  F  Q  :  E  F  V  T  N  R  H  E  L  S  L  G  I  S  G  I  V  R  I  T  D  K  R  V  I  *  F  Q  D  V  Q  D  K  S  K  W  H  N  P  P  R :   F  S  S  Q  A  T  K  F  V  V  R  K  R  Y  L  L  F  Y  F  P  *  N  S  *  T  E  E  A  F  K  G  *  V  *  Q  D  N  *  R  H  H  K  E  G  Y  G  R  A  C  F  F  P  G  F  *  Q  M  G  C  C  S  R  R  *  D  Y  S  C  S  K  E  R  D  N  C  *  A  E  K  V  V  P  M  A  M  T  *  K  C  D  Y  S  G  G  E  L  R  C  P  D  L  L  *  C  V  P  R  F  S  R  R  *  *  S  F  F  F  L  S  M  S  Y  A  V  V  L  H  I  K  K  G  L  Y  Y  G  V  I  T  F  L  L  L  *  A  S  V  T  L  L  T  F  T  R  H  *  N  *  L  L  Q  G  L  C  F  N  V  *  *  M  *  Q  L  D  S  G  D  N  I  L  P  L  *  M  S  *  C  F  D  V  T  </first_frame>
            <second_frame>  *  Q  F  L  R  V  E  Y  L  L  F  F  Y  G  S  S  S  H  *  P  P  *  S  A  L  M  N  F  L  *  :  L  Y  L  N  L  P  R  C  R  Y  L  Q  E  *  *  W  K  I  L  L  A  L  S  Q  E  R  K  L  F  V  R  E  F  R  S  M  D  C  Q  G  *  K  V  *  E  S  M  P  I  Q  *  R  *  M  C  H  I  *  I  Q  V  G  V  H  L  M  L  R  S  V  S  I   : G  I  N  P  W  Q  L  G  C  V  R  Q  A  N  G  *  K  *  P  R  V  H  G  C  D  Q  C  H  L  S  S  T  G  F  W  I  L  G  *  Q  A  H  L  R  T  L  F  R  S  R  C  T  K  :  I  F  I  C  I  V  L  C  F  W  Y  W  V  Y  C  Y  L  L  W  H  P  S  L  A  S  L  *  Y  F  S  M  V  V  R  W  Q  *  G  L  F  L  *  Y  *  W  S  F  S  R :   E  *  S  F  F  R  L  V  G  R  V  H  *  Q  Y  S  C  I  H  P  L :   L  V  *  D  L  S  F  *  A  M  C  P  N  C  C  V  Q  Y  C  A  R  L  V  L  V  K  T  C  T  T  L  Y  :  L  A  I  F  L  L  L  F  L  V  I  A  G  A  W  L  G  F  W  V  V  H  K  L  V  L  E  E  D  G  S  I  D  T  G  V  S  Q  F  V  A  W  S  I  R  F  L  A  S  A  L  I  L  Q  :  S  S  V  D  P  L  L  C  A  E  A  W  I  C  G  V  L  I  S  S  I  L  R  R  L  C  R  P  K  Y  V  L  R  F  F  K :   N  L  S  Q  I  D  T  S  Y  L  W  E  S  Q  E  L  Y  A  S  P  T  K  G  S  Y  D  S  R  T  F  K  T  N  L  N  G  T  I  R  P   : G  F  P  L  K  P  R  S  L  L  S  E  K  D  T  Y  Y  S  T  F  H  K  T  P  E  Q  K  K  L  S  K  D  E  Y  D  K  I  T  K  D  T  T  K  K  A  M  E  E  L  V  S  S  P  D  F  S  K  W  A  V  A  H  A  D  R  I  T  L  A  P  K  K  E  T  T  A  R  Q  R  R  W  Y  Q  W  L  *  L  E  N  V  I  I  V  A  E  N  L  G  V  Q  T  C  C  N  V  F  R  V  F  H  V  G  S  D  L  F  F  F  *  V  C  L  M  L  *  F  S  T  *  K  K  V  C  I  M  V  *  L  H  S  Y  Y  S  E  L  V  *  H  Y  *  L  L  Q  G  T  E  T  D  C  F  K  D  C  A  L  M  F  N  E  C  N  N  W  I  V  E  I  T  F  C  H  C  K  C  L  D  A  L  M  L  L </second_frame>
            <third_frame>   S  N  S  F  A  W  S  I  C  S  S  S  M  A  P  R  R  I  N  L  H  S  P  R  *  *  T  F  F  S :   C  I  S  I  Y  H  A  A  D  I  S  R  N  S  S  G  K  F  S  W  L  *  A  R  N  E  S  Y  L  *  E  S  S  D  P  W  I  V  K  A  K  K  S  K  K  V  C  P  F  S  K  G  E  C  V  I  S  E  S  K  W  A  S  T  *  C  *  G  L  F  P  *  :  E  S  I  R  G  N  W  D  V  S  A  R  P  M  D  E  N  N  Q  G  F  M  G  A  I  N  V  T  F  R  A  Q  V  F  G  Y  *  D  D  R  L  I  *  G  H  F  S  G  L  A  A  R  R :   F  L  F  V  S  C  C  V  S  G  I  G  Y  I  A  T  C  S  G  I  L  P  *  Q  V  S  S  I  F  L  W  W  C  D  G  S  R  G  Y  S  C  D  T  D  G  P  F  P   : G  N  E  A  S  S  D  W  *  E  E  F  T  S  N  I  L  V  F  I  H   : C  W  C  R  I  F  H  S  K  L  C  A  P  I  V  A  F  N  T  A  R  D  W  C  W  *  R  H  V  Q  P  C  I :   W  Q  Y  F  C  C  F  S  L  *  L  L  E  L  G  W  G  F  G  L  F  T  N  S  Y  L  K  K  M  D  Q  L  T  P  E  Y  L  N  L  L  L  G  P  F  D  F  S  L  L  R  *  F  F  R :   V  L  W  I  L  Y  C  V  P  R  H  G  Y  V  E  F  *  S  H  Q  S  *  G  D  Y  A  V  P  N  M  F  C  A  F  S   : R  I  C  H  K  *  T  R  V  I  S  G  N  L  R  N  C  T  H  H  R  Q  K  G  H  M  I  P  G  R  S  R  Q  I  *  M  A  Q  S  A  Q  :  V  F  L  S  S  H  E  V  C  C  Q  K  K  I  L  T  I  L  L  S  I  K  L  L  N  R  R  S  F  Q  R  M  S  M  T  R  *  L  K  T  P  Q  R  R  L  W  K  S  L  F  L  P  R  I  L  A  N  G  L  L  L  T  Q  I  G  L  L  L  L  Q  R  K  R  Q  L  L  G  R  E  G  G  T  N  G  Y  D  L  K  M  *  L  *  W  R  R  T  *  V  S  R  L  V  V  M  C  S  A  F  F  T  *  V  V  I  F  F  F  F  K  Y  V  L  C  C  S  S  P  H  K  K  R  F  V  L  W  C  D  Y  I  L  I  T  L  S  *  C  N  I  I  D  F  Y  K  A  L  K  L  T  A  S  R  T  V  L  *  C  L  M  N  V  T  T  G  *  W  R  *  H  F  A  T  V  N  V  L  M  L  *  C  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34319" stop="34229"/>
                    <exon start="31707" stop="31491"/>
                    <exon start="29941" stop="29784"/>
                    <exon start="29676" stop="29531"/>
                    <exon start="27486" stop="27424"/>
                    <exon start="27323" stop="27227"/>
                    <exon start="26910" stop="26831"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>849</number_coding_nucleotides>
                  <number_encoded_amino_acids>283</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VAIPSRGVFALLLWLLVALTSIVRADELSLVVSQSTTLQISPGIVVENSPGSKPGTKVICERVQIHGLSRLKSLRKYAHSVKVNVSYLNPSGRPPNAEVCFHRNQSVAIGMCPPGQWMKITKGSWVRSMSPFEHRFLDIRMTGSSKDTFQVSLHEDFYLYRVVFLVLGILLLALASFLSKSLVFFYGGAMAVGVILVILMVLFQGMKLLPTGRKSSLAIFLYSSIVGVGSFILSYVPQLLRSILREIGVGEDMYNPVSGNISAAFPCDCWSLVGVLGCSQTRT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26812" stop="26749"/>
                    <exon start="26625" stop="26519"/>
                    <exon start="26344" stop="26267"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HRSISICCLVHSISRFCVDSSEFCGSFIVCRGMDMWSSDLINLEETMPSQICSALFQEFVTNRHELSLGISGIVRITDKRVI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="46355" PGL_stop="53291"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46355" e_stop="46725"/>
            <exon e_start="48580" e_stop="48626"/>
            <exon e_start="48731" e_stop="48845"/>
            <exon e_start="51387" e_stop="51431"/>
            <exon e_start="51526" e_stop="51585"/>
            <exon e_start="51676" e_stop="51771"/>
            <exon e_start="52916" e_stop="53291"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.917" e_score="0.995"/>
          <exon-intron don_prob="0.997" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.934" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.937" e_score="1.000"/>
          <exon-intron don_prob="0.571" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.984" e_score="1.000"/>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="46355" e_stop="46725" e_length="371"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.917">
            <gDNA_intron_boundary i_start="46726" i_stop="48579" i_length="1854"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="48580" e_stop="48626" e_length="47"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.992">
            <gDNA_intron_boundary i_start="48627" i_stop="48730" i_length="104"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="48731" e_stop="48845" e_length="115"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.934">
            <gDNA_intron_boundary i_start="48846" i_stop="51386" i_length="2541"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="51387" e_stop="51431" e_length="45"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.937">
            <gDNA_intron_boundary i_start="51432" i_stop="51525" i_length="94"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="51526" e_stop="51585" e_length="60"/>
          </exon>
          <intron i_serial="5" don_prob="0.571" acc_prob="0.996">
            <gDNA_intron_boundary i_start="51586" i_stop="51675" i_length="90"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="51676" e_stop="51771" e_length="96"/>
          </exon>
          <intron i_serial="6" don_prob="0.991" acc_prob="0.984">
            <gDNA_intron_boundary i_start="51772" i_stop="52915" i_length="1144"/>
          </intron>
          <exon e_serial="7" e_score="0.976">
            <gDNA_exon_boundary e_start="52916" e_stop="53291" e_length="376"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46355" stop="46725"/>
              <exon start="48580" stop="48626"/>
              <exon start="48731" stop="48845"/>
              <exon start="51387" stop="51431"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U593963" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46361" stop="46725"/>
              <exon start="48580" stop="48626"/>
              <exon start="48731" stop="48845"/>
              <exon start="51387" stop="51431"/>
              <exon start="51526" stop="51585"/>
              <exon start="51676" stop="51771"/>
              <exon start="52916" stop="53291"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582871" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATACTCTTAGCTAGAAAAATTGGGCTAAGAAGTTGCCAATTTTTTCTTCCACAAATTTTCATTTCAACCCACTTGCAATCTGCAACCATGGAATCTCTCCAGCAGAGTAGCCTAACATTTGCTACAAAATTTCCTTCTTTTTGTTCCTTCTCTCCCACTCCCAACACCTTCAAGTTTCTTCACCCTTTCCCTTCCTCTGCTATTCCTCTCACCGCCACTACACCAAAACGAATTTCTAGTTTTGTGCCTAAAGCTGCTGCTTCCACCGCTGCCTTTGCTCAAGACATTGGTGATGTACTAGCAGATGTTTCAATTTTCACTGCTACTGGTCAGTCCGTCAAGTTTGAGGACCTTTGGGATCAAAATGAG : GGAGTAGCTGTTGTTGCACTTCTGAGGCATTTTGGCTGTCCTTGCTG : CTGGGAACTTGCTAAAGCACTCAAAGAGACAAAGGAGAGATTTGATTCTGCTGGTGTAAAGCTAATTGCAGTTGGTATTGGTGCTCCTAACAAAGCACGTATTCTTGCTGAAAGG : TTACCATTTCCATTGGATTGCTTGTATGCTGATCCAGACCGCAAG : GCATACGATGTTCTAGGCCTGTATTATGGTGTTGGCCGCACATTTTTCAACCCAGCTAGT : GCTAAAGTGCTCTCTAGATTCAATGAACTGCGGGAAGCTACGAAGAACTACACCATTGAAGCAACCCCTGATGACAGAAGTGGTGTCTTGCAGCAG : GGAGGGATGTTTCTGTTTAAAGGGAAGCAGTTGTTGTATGCATGGAAGGATGAAGGGACCGGTGACCATGCTCCTATGGAAGATATCTTTGATATTTGCTGCAAAGTTCCTGTTGCATAAATGCCTTCAATCTGTGTTTCATCTCTATTCGAATTTCCAAGGGAAGTGGATGCATATATTGGTTTAGTTCTCTAATTGTATATGTTGTATGTAATTCTGAAACTTGTAACTAAGGGCTCATTTGGTACGAGATTAAGGGATAATTTTTAATTTTAGGATGGGTTGGTATAAAATCGTGAAATAACTTTGTTCCATCACCTCTAGTATATGAGGATGGGAGGTAAATAGTCCATATCAGAATTTGAAATTGTATGAA</gDNA_template>
            <first_frame> K  Y  S  *  L  E  K  L  G  *  E  V  A  N  F  F  F  H  K  F  S  F  Q  P  T  C  N  L  Q  P  W  N  L  S  S  R  V  A  *  H  L  L  Q  N  F  L  L  F  V  P  S  L  P  L  P  T  P  S  S  F  F  T  L  S  L  P  L  L  F  L  S  P  P  L  H  Q  N  E  F  L  V  L  C  L  K  L  L  L  P  P  L  P  L  L  K  T  L  V  M  Y  *  Q  M  F  Q  F  S  L  L  L  V  S  P  S  S  L  R  T  F  G  I  K  M  R :   E  *  L  L  L  H  F  *  G  I  L  A  V  L  A   : A  G  N  L  L  K  H  S  K  R  Q  R  R  D  L  I  L  L  V  *  S  *  L  Q  L  V  L  V  L  L  T  K  H  V  F  L  L  K  G :   Y  H  F  H  W  I  A  C  M  L  I  Q  T  A  R :   H  T  M  F  *  A  C  I  M  V  L  A  A  H  F  S  T  Q  L  V :   L  K  C  S  L  D  S  M  N  C  G  K  L  R  R  T  T  P  L  K  Q  P  L  M  T  E  V  V  S  C  S  R :   E  G  C  F  C  L  K  G  S  S  C  C  M  H  G  R  M  K  G  P  V  T  M  L  L  W  K  I  S  L  I  F  A  A  K  F  L  L  H  K  C  L  Q  S  V  F  H  L  Y  S  N  F  Q  G  K  W  M  H  I  L  V  *  F  S  N  C  I  C  C  M  *  F  *  N  L  *  L  R  A  H  L  V  R  D  *  G  I  I  F  N  F  R  M  G  W  Y  K  I  V  K  *  L  C  S  I  T  S  S  I  *  G  W  E  V  N  S  P  Y  Q  N  L  K  L  Y  E </first_frame>
            <second_frame>  N  T  L  S  *  K  N  W  A  K  K  L  P  I  F  S  S  T  N  F  H  F  N  P  L  A  I  C  N  H  G  I  S  P  A  E  *  P  N  I  C  Y  K  I  S  F  F  L  F  L  L  S  H  S  Q  H  L  Q  V  S  S  P  F  P  F  L  C  Y  S  S  H  R  H  Y  T  K  T  N  F  *  F  C  A  *  S  C  C  F  H  R  C  L  C  S  R  H  W  *  C  T  S  R  C  F  N  F  H  C  Y  W  S  V  R  Q  V  *  G  P  L  G  S  K  *   : G  S  S  C  C  C  T  S  E  A  F  W  L  S  L  L  :  L  G  T  C  *  S  T  Q  R  D  K  G  E  I  *  F  C  W  C  K  A  N  C  S  W  Y  W  C  S  *  Q  S  T  Y  S  C  *  K   : V  T  I  S  I  G  L  L  V  C  *  S  R  P  Q   : G  I  R  C  S  R  P  V  L  W  C  W  P  H  I  F  Q  P  S  *   : C  *  S  A  L  *  I  Q  *  T  A  G  S  Y  E  E  L  H  H  *  S  N  P  *  *  Q  K  W  C  L  A  A   : G  R  D  V  S  V  *  R  E  A  V  V  V  C  M  E  G  *  R  D  R  *  P  C  S  Y  G  R  Y  L  *  Y  L  L  Q  S  S  C  C  I  N  A  F  N  L  C  F  I  S  I  R  I  S  K  G  S  G  C  I  Y  W  F  S  S  L  I  V  Y  V  V  C  N  S  E  T  C  N  *  G  L  I  W  Y  E  I  K  G  *  F  L  I  L  G  W  V  G  I  K  S  *  N  N  F  V  P  S  P  L  V  Y  E  D  G  R  *  I  V  H  I  R  I  *  N  C  M   </second_frame>
            <third_frame>   I  L  L  A  R  K  I  G  L  R  S  C  Q  F  F  L  P  Q  I  F  I  S  T  H  L  Q  S  A  T  M  E  S  L  Q  Q  S  S  L  T  F  A  T  K  F  P  S  F  C  S  F  S  P  T  P  N  T  F  K  F  L  H  P  F  P  S  S  A  I  P  L  T  A  T  T  P  K  R  I  S  S  F  V  P  K  A  A  A  S  T  A  A  F  A  Q  D  I  G  D  V  L  A  D  V  S  I  F  T  A  T  G  Q  S  V  K  F  E  D  L  W  D  Q  N  E  :  G  V  A  V  V  A  L  L  R  H  F  G  C  P  C  C :   W  E  L  A  K  A  L  K  E  T  K  E  R  F  D  S  A  G  V  K  L  I  A  V  G  I  G  A  P  N  K  A  R  I  L  A  E  R  :  L  P  F  P  L  D  C  L  Y  A  D  P  D  R  K  :  A  Y  D  V  L  G  L  Y  Y  G  V  G  R  T  F  F  N  P  A  S  :  A  K  V  L  S  R  F  N  E  L  R  E  A  T  K  N  Y  T  I  E  A  T  P  D  D  R  S  G  V  L  Q  Q  :  G  G  M  F  L  F  K  G  K  Q  L  L  Y  A  W  K  D  E  G  T  G  D  H  A  P  M  E  D  I  F  D  I  C  C  K  V  P  V  A  *  M  P  S  I  C  V  S  S  L  F  E  F  P  R  E  V  D  A  Y  I  G  L  V  L  *  L  Y  M  L  Y  V  I  L  K  L  V  T  K  G  S  F  G  T  R  L  R  D  N  F  *  F  *  D  G  L  V  *  N  R  E  I  T  L  F  H  H  L  *  Y  M  R  M  G  G  K  *  S  I  S  E  F  E  I  V  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46357" stop="46725"/>
                    <exon start="48580" stop="48626"/>
                    <exon start="48731" stop="48845"/>
                    <exon start="51387" stop="51431"/>
                    <exon start="51526" stop="51585"/>
                    <exon start="51676" stop="51771"/>
                    <exon start="52916" stop="53035"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>849</number_coding_nucleotides>
                  <number_encoded_amino_acids>283</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILLARKIGLRSCQFFLPQIFISTHLQSATMESLQQSSLTFATKFPSFCSFSPTPNTFKFLHPFPSSAIPLTATTPKRISSFVPKAAASTAAFAQDIGDVLADVSIFTATGQSVKFEDLWDQNEGVAVVALLRHFGCPCCWELAKALKETKERFDSAGVKLIAVGIGAPNKARILAERLPFPLDCLYADPDRKAYDVLGLYYGVGRTFFNPASAKVLSRFNELREATKNYTIEATPDDRSGVLQQGGMFLFKGKQLLYAWKDEGTGDHAPMEDIFDICCKVPVA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="68208" PGL_stop="70790"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68208" e_stop="70400"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.921"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.921">
            <gDNA_exon_boundary e_start="68208" e_stop="70400" e_length="2193"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68208" stop="70400"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U578865" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68208" stop="69633"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577296" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68226" stop="68978"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590682" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68272" stop="68827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590648" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69631" stop="70264"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592023" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGAGCAGCGGCAAGAGGCCGTGGTAGAGGTCGTGGGAGGACGTTCTCTAGAGGAAGAGGACGAGCACCTAGCCCATCTGATACTGGGGCGGTGACTCCTCCACCGACTGAAGAAGTAATAAGAGAAGGGGAGGATGGGGAAAATGAACAAGTGCAGAATGAGGGATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATCAAGGTCAGGCACCTCCAGTGTTTTCTGCACCAACACCTCCGGTTTCAGAGGTACAACATGCAGCCACTATGGCTCCCCGCATGGATGCCTCATTGGAAATAGGCACATTTCCTCGTCTGACTACAGGGCCTGTAATGACAAATGATCAGCATGAAATTTTCAGTAAGTTCTTGAAATTGAAACCTTCAGTCTTCAAGGGTGCTGAGTCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAATAGAGGCACCACCTATGACTTGGGCCTCATTCTCTAGTTTGTTTATGGAGAAGTATATCCCCCGGACTTTGAGGGATAGGAAAAGGGATGAGTTCTTGAGCCTAGAGCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCAAGGTATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAGGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACAGCGAAATCTTTTCAAGAAGTGGTAGACTTCGTGATAGAGGTGGAAGGAGTGAAGCCAGATGAATTCACCATGGCATCGACATCAAAGAGGTTTCGAAAGGGAGGTGAGTTTAATGGTTCTTACTCGAGAGGACAGGGCTCCGGAGGTTACTCAGTTCGACCCATTCAGTCTTCACTACAAACTGTAGTTGGGGCTCCCCCTCAGACCGGTCAACACTTCTCTGAGAGACCTATGCTCGAATCTAGAGAGTGTTATGGATGTGGGGAGACTGGACACATTAAGAAGTATTGTCCAAAACAGAGTTACAGACCTCCAAATGTTAGAGGTAGAGGTGGTTATGGAAGAGGCCGTTATTCTGGAGGACGTGGTGGTCGAGGTAATGGTGGCCACCAAAACGGTCGGGGTGATGGGCAAGCTGGAGCCACTACATCACAACATGGTAGGGGCAACGGACAGACAGGTGAGAGGGCCCATTGTTACGCTTTCCCCGGGCGGTCAGAAGCGGAAACATCAGATGCTGTTATCACAGGTAATCTTTCGGTTTGTGATTGCATGGATTTTGTATTGTTTGACCCTGGCTCTACATTTTCATATGTATCTTCCGCATTTGCTAATGGTCTTGATTTACATTGTGAATTTGCTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAAGGTGTATAGGTCTTGTCTTGTAACTTTTATGGGGAGCAATACTCATGTAGAGTTGGTTATCTTAGAAATGGTTGACTTCGATGTAATTCTGGGCATGACTTGGCTTTCTCCAAATTTTGCGATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTTCGTATCATCTCCTTTCTTCGTTCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATTGACCTTAAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCTGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGATTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTCGAATGTGCATAGACTACAGACAACTAAACAAGGTAACCATAAAGAACAAGTATCCTCTTCCTCGCATTGATG</gDNA_template>
            <first_frame> K  S  S  G  K  R  P  W  *  R  S  W  E  D  V  L  *  R  K  R  T  S  T  *  P  I  *  Y  W  G  G  D  S  S  T  D  *  R  S  N  K  R  R  G  G  W  G  K  *  T  S  A  E  *  G  I  A  T  P  T  Y  P  R  D  D  Q  S  G  S  R  L  S  *  W  V  V  *  S  R  S  G  T  S  S  V  F  C  T  N  T  S  G  F  R  G  T  T  C  S  H  Y  G  S  P  H  G  C  L  I  G  N  R  H  I  S  S  S  D  Y  R  A  C  N  D  K  *  S  A  *  N  F  Q  *  V  L  E  I  E  T  F  S  L  Q  G  C  *  V  *  G  C  L  R  F  S  G  *  L  S  *  A  T  T  Q  D  G  Y  S  R  T  V  W  C  *  V  R  E  L  S  V  S  R  E  R  Q  N  V  V  A  V  T  C  *  V  S  T  N  R  G  T  T  Y  D  L  G  L  I  L  *  F  V  Y  G  E  V  Y  P  P  D  F  E  G  *  E  K  G  *  V  L  E  P  R  A  R  *  D  V  G  Q  C  I  *  G  *  V  S  C  T  I  K  V  C  H  P  T  L  F  Q  S  T  R  A  D  S  S  F  C  E  G  V  E  V  R  V  A  D  F  S  L  T  G  S  G  Y  S  E  I  F  S  R  S  G  R  L  R  D  R  G  G  R  S  E  A  R  *  I  H  H  G  I  D  I  K  E  V  S  K  G  R  *  V  *  W  F  L  L  E  R  T  G  L  R  R  L  L  S  S  T  H  S  V  F  T  T  N  C  S  W  G  S  P  S  D  R  S  T  L  L  *  E  T  Y  A  R  I  *  R  V  L  W  M  W  G  D  W  T  H  *  E  V  L  S  K  T  E  L  Q  T  S  K  C  *  R  *  R  W  L  W  K  R  P  L  F  W  R  T  W  W  S  R  *  W  W  P  P  K  R  S  G  *  W  A  S  W  S  H  Y  I  T  T  W  *  G  Q  R  T  D  R  *  E  G  P  L  L  R  F  P  R  A  V  R  S  G  N  I  R  C  C  Y  H  R  *  S  F  G  L  *  L  H  G  F  C  I  V  *  P  W  L  Y  I  F  I  C  I  F  R  I  C  *  W  S  *  F  T  L  *  I  C  L  T  C  L  F  V  F  L  L  R  W  V  S  L  *  *  L  K  R  C  I  G  L  V  L  *  L  L  W  G  A  I  L  M  *  S  W  L  S  *  K  W  L  T  S  M  *  F  W  A  *  L  G  F  L  Q  I  L  R  S  W  I  V  M  L  K  L  *  R  *  P  S  L  G  Q  I  R  *  C  G  R  V  T  T  L  P  I  R  F  V  S  S  P  F  F  V  L  R  K  W  L  V  K  G  V  *  L  S  W  H  I  S  R  M  T  L  P  K  Y  L  R  L  S  R  F  R  W  S  V  S  F  W  M  C  S  L  Q  I  F  L  V  C  H  Q  I  G  I  L  T  S  V  L  T  L  N  R  V  L  A  P  F  L  Y  P  L  I  E  W  L  L  R  S  *  E  S  *  K  P  N  F  K  S  C  *  T  K  A  S  L  D  Q  V  H  L  L  G  V  L  R  F  C  L  *  R  R  R  M  G  V  F  E  C  A  *  T  T  D  N  *  T  R  *  P  *  R  T  S  I  L  F  L  A  L  M </first_frame>
            <second_frame>  R  A  A  A  R  G  R  G  R  G  R  G  R  T  F  S  R  G  R  G  R  A  P  S  P  S  D  T  G  A  V  T  P  P  P  T  E  E  V  I  R  E  G  E  D  G  E  N  E  Q  V  Q  N  E  G  L  P  P  Q  P  T  P  E  M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  Q  A  P  P  V  F  S  A  P  T  P  P  V  S  E  V  Q  H  A  A  T  M  A  P  R  M  D  A  S  L  E  I  G  T  F  P  R  L  T  T  G  P  V  M  T  N  D  Q  H  E  I  F  S  K  F  L  K  L  K  P  S  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  V  D  C  H  E  L  L  H  K  M  G  I  V  E  R  F  G  V  E  F  V  S  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  V  E  C  Q  P  I  E  A  P  P  M  T  W  A  S  F  S  S  L  F  M  E  K  Y  I  P  R  T  L  R  D  R  K  R  D  E  F  L  S  L  E  Q  G  R  M  S  V  N  A  Y  E  A  K  F  R  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  R  I  R  R  F  V  R  G  L  R  S  E  L  R  I  S  A  L  Q  V  A  A  T  A  K  S  F  Q  E  V  V  D  F  V  I  E  V  E  G  V  K  P  D  E  F  T  M  A  S  T  S  K  R  F  R  K  G  G  E  F  N  G  S  Y  S  R  G  Q  G  S  G  G  Y  S  V  R  P  I  Q  S  S  L  Q  T  V  V  G  A  P  P  Q  T  G  Q  H  F  S  E  R  P  M  L  E  S  R  E  C  Y  G  C  G  E  T  G  H  I  K  K  Y  C  P  K  Q  S  Y  R  P  P  N  V  R  G  R  G  G  Y  G  R  G  R  Y  S  G  G  R  G  G  R  G  N  G  G  H  Q  N  G  R  G  D  G  Q  A  G  A  T  T  S  Q  H  G  R  G  N  G  Q  T  G  E  R  A  H  C  Y  A  F  P  G  R  S  E  A  E  T  S  D  A  V  I  T  G  N  L  S  V  C  D  C  M  D  F  V  L  F  D  P  G  S  T  F  S  Y  V  S  S  A  F  A  N  G  L  D  L  H  C  E  F  A  *  H  A  Y  S  C  F  Y  S  G  G  *  V  C  D  S  *  K  G  V  *  V  L  S  C  N  F  Y  G  E  Q  Y  S  C  R  V  G  Y  L  R  N  G  *  L  R  C  N  S  G  H  D  L  A  F  S  K  F  C  D  L  G  L  *  C  *  N  C  D  V  S  Q  A  W  D  R  S  V  S  V  G  G  *  L  H  F  Q  S  G  S  Y  H  L  L  S  S  F  *  E  N  G  *  *  R  V  F  S  F  L  G  T  S  Q  G  *  H  Y  P  S  T  F  D  *  V  G  F  G  G  P  *  V  S  G  C  V  P  C  R  S  S  W  Y  A  T  R  *  G  Y  *  L  L  Y  *  P  *  T  G  Y  S  P  H  F  Y  T  P  L  *  N  G  S  C  G  V  K  R  V  K  S  P  T  S  R  V  V  E  Q  R  L  H  *  T  K  C  I  S  L  G  C  S  D  F  V  C  E  E  E  G  W  E  F  S  N  V  H  R  L  Q  T  T  K  Q  G  N  H  K  E  Q  V  S  S  S  S  H  *   </second_frame>
            <third_frame>   E  Q  R  Q  E  A  V  V  E  V  V  G  G  R  S  L  E  E  E  D  E  H  L  A  H  L  I  L  G  R  *  L  L  H  R  L  K  K  *  *  E  K  G  R  M  G  K  M  N  K  C  R  M  R  D  C  H  P  N  L  P  Q  R  *  S  I  R  F  S  L  I  L  V  G  C  L  I  K  V  R  H  L  Q  C  F  L  H  Q  H  L  R  F  Q  R  Y  N  M  Q  P  L  W  L  P  A  W  M  P  H  W  K  *  A  H  F  L  V  *  L  Q  G  L  *  *  Q  M  I  S  M  K  F  S  V  S  S  *  N  *  N  L  Q  S  S  R  V  L  S  L  R  M  L  T  I  F  W  L  T  V  M  S  Y  Y  T  R  W  V  *  *  N  G  L  V  L  S  S  *  V  I  S  F  K  G  T  P  K  C  G  G  G  H  M  L  S  V  N  Q  *  R  H  H  L  *  L  G  P  H  S  L  V  C  L  W  R  S  I  S  P  G  L  *  G  I  G  K  G  M  S  S  *  A  *  S  K  V  G  C  R  S  M  H  M  R  L  S  F  V  H  Y  Q  G  M  P  P  N  F  V  S  V  H  K  S  G  F  V  V  L  *  G  G  *  G  Q  S  C  G  F  Q  P  Y  R  *  R  L  Q  R  N  L  F  K  K  W  *  T  S  *  *  R  W  K  E  *  S  Q  M  N  S  P  W  H  R  H  Q  R  G  F  E  R  E  V  S  L  M  V  L  T  R  E  D  R  A  P  E  V  T  Q  F  D  P  F  S  L  H  Y  K  L  *  L  G  L  P  L  R  P  V  N  T  S  L  R  D  L  C  S  N  L  E  S  V  M  D  V  G  R  L  D  T  L  R  S  I  V  Q  N  R  V  T  D  L  Q  M  L  E  V  E  V  V  M  E  E  A  V  I  L  E  D  V  V  V  E  V  M  V  A  T  K  T  V  G  V  M  G  K  L  E  P  L  H  H  N  M  V  G  A  T  D  R  Q  V  R  G  P  I  V  T  L  S  P  G  G  Q  K  R  K  H  Q  M  L  L  S  Q  V  I  F  R  F  V  I  A  W  I  L  Y  C  L  T  L  A  L  H  F  H  M  Y  L  P  H  L  L  M  V  L  I  Y  I  V  N  L  L  D  M  P  I  R  V  S  T  P  V  G  E  S  V  I  V  E  K  V  Y  R  S  C  L  V  T  F  M  G  S  N  T  H  V  E  L  V  I  L  E  M  V  D  F  D  V  I  L  G  M  T  W  L  S  P  N  F  A  I  L  D  C  N  A  K  T  V  T  L  A  K  P  G  T  D  P  L  V  W  E  G  D  Y  T  S  N  P  V  R  I  I  S  F  L  R  S  K  K  M  V  S  K  G  C  L  A  F  L  A  H  L  K  D  D  T  T  Q  V  P  S  I  E  S  V  S  V  V  R  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  C  I  D  L  K  P  G  T  R  P  I  S  I  P  P  Y  R  M  A  P  A  E  L  R  E  L  K  A  Q  L  Q  E  L  L  N  K  G  F  I  R  P  S  A  S  P  W  G  A  P  I  L  F  V  K  K  K  D  G  S  F  R  M  C  I  D  Y  R  Q  L  N  K  V  T  I  K  N  K  Y  P  L  P  R  I  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68209" stop="69702"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1491</number_coding_nucleotides>
                  <number_encoded_amino_acids>497</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RAAARGRGRGRGRTFSRGRGRAPSPSDTGAVTPPPTEEVIREGEDGENEQVQNEGLPPQPTPEMINQVLAYLSGLSDQGQAPPVFSAPTPPVSEVQHAATMAPRMDASLEIGTFPRLTTGPVMTNDQHEIFSKFLKLKPSVFKGAESEDAYDFLVDCHELLHKMGIVERFGVEFVSYQFQGNAKMWWRSHVECQPIEAPPMTWASFSSLFMEKYIPRTLRDRKRDEFLSLEQGRMSVNAYEAKFRALSRYATQLCFSPQERIRRFVRGLRSELRISALQVAATAKSFQEVVDFVIEVEGVKPDEFTMASTSKRFRKGGEFNGSYSRGQGSGGYSVRPIQSSLQTVVGAPPQTGQHFSERPMLESRECYGCGETGHIKKYCPKQSYRPPNVRGRGGYGRGRYSGGRGGRGNGGHQNGRGDGQAGATTSQHGRGNGQTGERAHCYAFPGRSEAETSDAVITGNLSVCDCMDFVLFDPGSTFSYVSSAFANGLDLHCEFA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70017" stop="70217"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSWHISRMTLPKYLRLSRFRWSVSFWMCSLQIFLVCHQIGILTSVLTLNRVLAPFLYPLIEWLLRS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="68226" e_stop="69073"/>
            <exon e_start="69819" e_stop="70347"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.938"/>
          <exon-only e_score="0.926"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.938">
            <gDNA_exon_boundary e_start="68226" e_stop="69073" e_length="848"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="69074" i_stop="69818" i_length="745"/>
          </intron>
          <exon e_serial="2" e_score="0.926">
            <gDNA_exon_boundary e_start="69819" e_stop="70347" e_length="529"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68226" stop="68978"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590682" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68272" stop="68827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590648" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68873" stop="69073"/>
              <exon start="69819" stop="70347"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592109" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCGTGGTAGAGGTCGTGGGAGGACGTTCTCTAGAGGAAGAGGACGAGCACCTAGCCCATCTGATACTGGGGCGGTGACTCCTCCACCGACTGAAGAAGTAATAAGAGAAGGGGAGGATGGGGAAAATGAACAAGTGCAGAATGAGGGATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATCAAGGTCAGGCACCTCCAGTGTTTTCTGCACCAACACCTCCGGTTTCAGAGGTACAACATGCAGCCACTATGGCTCCCCGCATGGATGCCTCATTGGAAATAGGCACATTTCCTCGTCTGACTACAGGGCCTGTAATGACAAATGATCAGCATGAAATTTTCAGTAAGTTCTTGAAATTGAAACCTTCAGTCTTCAAGGGTGCTGAGTCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAATAGAGGCACCACCTATGACTTGGGCCTCATTCTCTAGTTTGTTTATGGAGAAGTATATCCCCCGGACTTTGAGGGATAGGAAAAGGGATGAGTTCTTGAGCCTAGAGCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCAAGGTATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAGGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACAGCGAAATCTTTTCAAG : AAATGGTTGACTTCGATGTAATTCTGGGCATGACTTGGCTTTCTCCAAATTTTGCGATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTTCGTATCATCTCCTTTCTTCGTTCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATTGACCTTAAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCTGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGATTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTCGAATGTGCATAGACTACAG</gDNA_template>
            <first_frame> P  W  *  R  S  W  E  D  V  L  *  R  K  R  T  S  T  *  P  I  *  Y  W  G  G  D  S  S  T  D  *  R  S  N  K  R  R  G  G  W  G  K  *  T  S  A  E  *  G  I  A  T  P  T  Y  P  R  D  D  Q  S  G  S  R  L  S  *  W  V  V  *  S  R  S  G  T  S  S  V  F  C  T  N  T  S  G  F  R  G  T  T  C  S  H  Y  G  S  P  H  G  C  L  I  G  N  R  H  I  S  S  S  D  Y  R  A  C  N  D  K  *  S  A  *  N  F  Q  *  V  L  E  I  E  T  F  S  L  Q  G  C  *  V  *  G  C  L  R  F  S  G  *  L  S  *  A  T  T  Q  D  G  Y  S  R  T  V  W  C  *  V  R  E  L  S  V  S  R  E  R  Q  N  V  V  A  V  T  C  *  V  S  T  N  R  G  T  T  Y  D  L  G  L  I  L  *  F  V  Y  G  E  V  Y  P  P  D  F  E  G  *  E  K  G  *  V  L  E  P  R  A  R  *  D  V  G  Q  C  I  *  G  *  V  S  C  T  I  K  V  C  H  P  T  L  F  Q  S  T  R  A  D  S  S  F  C  E  G  V  E  V  R  V  A  D  F  S  L  T  G  S  G  Y  S  E  I  F  S  R :   N  G  *  L  R  C  N  S  G  H  D  L  A  F  S  K  F  C  D  L  G  L  *  C  *  N  C  D  V  S  Q  A  W  D  R  S  V  S  V  G  G  *  L  H  F  Q  S  G  S  Y  H  L  L  S  S  F  *  E  N  G  *  *  R  V  F  S  F  L  G  T  S  Q  G  *  H  Y  P  S  T  F  D  *  V  G  F  G  G  P  *  V  S  G  C  V  P  C  R  S  S  W  Y  A  T  R  *  G  Y  *  L  L  Y  *  P  *  T  G  Y  S  P  H  F  Y  T  P  L  *  N  G  S  C  G  V  K  R  V  K  S  P  T  S  R  V  V  E  Q  R  L  H  *  T  K  C  I  S  L  G  C  S  D  F  V  C  E  E  E  G  W  E  F  S  N  V  H  R  L  Q </first_frame>
            <second_frame>  R  G  R  G  R  G  R  T  F  S  R  G  R  G  R  A  P  S  P  S  D  T  G  A  V  T  P  P  P  T  E  E  V  I  R  E  G  E  D  G  E  N  E  Q  V  Q  N  E  G  L  P  P  Q  P  T  P  E  M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  Q  A  P  P  V  F  S  A  P  T  P  P  V  S  E  V  Q  H  A  A  T  M  A  P  R  M  D  A  S  L  E  I  G  T  F  P  R  L  T  T  G  P  V  M  T  N  D  Q  H  E  I  F  S  K  F  L  K  L  K  P  S  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  V  D  C  H  E  L  L  H  K  M  G  I  V  E  R  F  G  V  E  F  V  S  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  V  E  C  Q  P  I  E  A  P  P  M  T  W  A  S  F  S  S  L  F  M  E  K  Y  I  P  R  T  L  R  D  R  K  R  D  E  F  L  S  L  E  Q  G  R  M  S  V  N  A  Y  E  A  K  F  R  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  R  I  R  R  F  V  R  G  L  R  S  E  L  R  I  S  A  L  Q  V  A  A  T  A  K  S  F  Q   : E  M  V  D  F  D  V  I  L  G  M  T  W  L  S  P  N  F  A  I  L  D  C  N  A  K  T  V  T  L  A  K  P  G  T  D  P  L  V  W  E  G  D  Y  T  S  N  P  V  R  I  I  S  F  L  R  S  K  K  M  V  S  K  G  C  L  A  F  L  A  H  L  K  D  D  T  T  Q  V  P  S  I  E  S  V  S  V  V  R  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  C  I  D  L  K  P  G  T  R  P  I  S  I  P  P  Y  R  M  A  P  A  E  L  R  E  L  K  A  Q  L  Q  E  L  L  N  K  G  F  I  R  P  S  A  S  P  W  G  A  P  I  L  F  V  K  K  K  D  G  S  F  R  M  C  I  D  Y   </second_frame>
            <third_frame>   V  V  E  V  V  G  G  R  S  L  E  E  E  D  E  H  L  A  H  L  I  L  G  R  *  L  L  H  R  L  K  K  *  *  E  K  G  R  M  G  K  M  N  K  C  R  M  R  D  C  H  P  N  L  P  Q  R  *  S  I  R  F  S  L  I  L  V  G  C  L  I  K  V  R  H  L  Q  C  F  L  H  Q  H  L  R  F  Q  R  Y  N  M  Q  P  L  W  L  P  A  W  M  P  H  W  K  *  A  H  F  L  V  *  L  Q  G  L  *  *  Q  M  I  S  M  K  F  S  V  S  S  *  N  *  N  L  Q  S  S  R  V  L  S  L  R  M  L  T  I  F  W  L  T  V  M  S  Y  Y  T  R  W  V  *  *  N  G  L  V  L  S  S  *  V  I  S  F  K  G  T  P  K  C  G  G  G  H  M  L  S  V  N  Q  *  R  H  H  L  *  L  G  P  H  S  L  V  C  L  W  R  S  I  S  P  G  L  *  G  I  G  K  G  M  S  S  *  A  *  S  K  V  G  C  R  S  M  H  M  R  L  S  F  V  H  Y  Q  G  M  P  P  N  F  V  S  V  H  K  S  G  F  V  V  L  *  G  G  *  G  Q  S  C  G  F  Q  P  Y  R  *  R  L  Q  R  N  L  F  K  :  K  W  L  T  S  M  *  F  W  A  *  L  G  F  L  Q  I  L  R  S  W  I  V  M  L  K  L  *  R  *  P  S  L  G  Q  I  R  *  C  G  R  V  T  T  L  P  I  R  F  V  S  S  P  F  F  V  L  R  K  W  L  V  K  G  V  *  L  S  W  H  I  S  R  M  T  L  P  K  Y  L  R  L  S  R  F  R  W  S  V  S  F  W  M  C  S  L  Q  I  F  L  V  C  H  Q  I  G  I  L  T  S  V  L  T  L  N  R  V  L  A  P  F  L  Y  P  L  I  E  W  L  L  R  S  *  E  S  *  K  P  N  F  K  S  C  *  T  K  A  S  L  D  Q  V  H  L  L  G  V  L  R  F  C  L  *  R  R  R  M  G  V  F  E  C  A  *  T  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68227" stop="69073"/>
                    <exon start="69819" stop="70345"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1374</number_coding_nucleotides>
                  <number_encoded_amino_acids>458</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGRGRGRTFSRGRGRAPSPSDTGAVTPPPTEEVIREGEDGENEQVQNEGLPPQPTPEMINQVLAYLSGLSDQGQAPPVFSAPTPPVSEVQHAATMAPRMDASLEIGTFPRLTTGPVMTNDQHEIFSKFLKLKPSVFKGAESEDAYDFLVDCHELLHKMGIVERFGVEFVSYQFQGNAKMWWRSHVECQPIEAPPMTWASFSSLFMEKYIPRTLRDRKRDEFLSLEQGRMSVNAYEAKFRALSRYATQLCFSPQERIRRFVRGLRSELRISALQVAATAKSFQEMVDFDVILGMTWLSPNFAILDCNAKTVTLAKPGTDPLVWEGDYTSNPVRIISFLRSKKMVSKGCLAFLAHLKDDTTQVPSIESVSVVREFLDVFPADLPGMPPDRDIDFCIDLKPGTRPISIPPYRMAPAELRELKAQLQELLNKGFIRPSASPWGAPILFVKKKDGSFRMCIDY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="68226" e_stop="69110"/>
            <exon e_start="70227" e_stop="70790"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.928"/>
          <exon-only e_score="0.954"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.928">
            <gDNA_exon_boundary e_start="68226" e_stop="69110" e_length="885"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="69111" i_stop="70226" i_length="1116"/>
          </intron>
          <exon e_serial="2" e_score="0.954">
            <gDNA_exon_boundary e_start="70227" e_stop="70790" e_length="564"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68226" stop="68978"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590682" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68238" stop="69110"/>
              <exon start="70227" stop="70790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68272" stop="68827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590648" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCGTGGTAGAGGTCGTGGGAGGACGTTCTCTAGAGGAAGAGGACGAGCACCTAGCCCATCTGATACTGGGGCGGTGACTCCTCCACCGACTGAAGAAGTAATAAGAGAAGGGGAGGATGGGGAAAATGAACAAGTGCAGAATGAGGGATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATCAAGGTCAGGCACCTCCAGTGTTTTCTGCACCAACACCTCCGGTTTCAGAGGTACAACATGCAGCCACTATGGCTCCCCGCATGGATGCCTCATTGGAAATAGGCACATTTCCTCGTCTGACTACAGGGCCTGTAATGACAAATGATCAGCATGAAATTTTCAGTAAGTTCTTGAAATTGAAACCTTCAGTCTTCAAGGGTGCTGAGTCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAATAGAGGCACCACCTATGACTTGGGCCTCATTCTCTAGTTTGTTTATGGAGAAGTATATCCCCCGGACTTTGAGGGATAGGAAAAGGGATGAGTTCTTGAGCCTAGAGCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCAAGGTATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAGGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACAGCGAAATCTTTTCAAGAAGTGGTAGACTTCGTGATAGAGGTGGAAGGAGTGAA : AAGCCCAACTTCAAGAGTTGTTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGATTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTCGAATGTGCATAGACTACAGACAACTAAACAAGGTAACCATAAAGAACAAGTATCCTCTTCCTCGCATTGATGACTTGTTCGATCAGTTACAAGGAGCTTGTGTCTTCTCTAAGATTGACTTGAGATCCGGTTATCATCAATTGAAAATACGGGCAACGGATGTGCCAAAGACTGCTTTTAGAACCAGGTATGGGTATTACGAATTTGTAGTGATGTCTTTTGGTCTTACGAATGCCCCTGCTGCGTTCATGAGTTTGATGAACGGGATTTTTAAGCTATATCTGGATCTATTTGTGATCGTATTTATTGATGATATATTGGTATACTCAAAGATCAAGAAGGAACATGAGGAGCATTTGAGAATGGTATTGGAAATGTTGAGGGAGAAAAAGCTTTATGCCAAGTTCTCTAAGTGTGAGTTTTGGCTAGATGCAGTGTCCTTCTTGGGGCACGTGGTTTCTA</gDNA_template>
            <first_frame> P  W  *  R  S  W  E  D  V  L  *  R  K  R  T  S  T  *  P  I  *  Y  W  G  G  D  S  S  T  D  *  R  S  N  K  R  R  G  G  W  G  K  *  T  S  A  E  *  G  I  A  T  P  T  Y  P  R  D  D  Q  S  G  S  R  L  S  *  W  V  V  *  S  R  S  G  T  S  S  V  F  C  T  N  T  S  G  F  R  G  T  T  C  S  H  Y  G  S  P  H  G  C  L  I  G  N  R  H  I  S  S  S  D  Y  R  A  C  N  D  K  *  S  A  *  N  F  Q  *  V  L  E  I  E  T  F  S  L  Q  G  C  *  V  *  G  C  L  R  F  S  G  *  L  S  *  A  T  T  Q  D  G  Y  S  R  T  V  W  C  *  V  R  E  L  S  V  S  R  E  R  Q  N  V  V  A  V  T  C  *  V  S  T  N  R  G  T  T  Y  D  L  G  L  I  L  *  F  V  Y  G  E  V  Y  P  P  D  F  E  G  *  E  K  G  *  V  L  E  P  R  A  R  *  D  V  G  Q  C  I  *  G  *  V  S  C  T  I  K  V  C  H  P  T  L  F  Q  S  T  R  A  D  S  S  F  C  E  G  V  E  V  R  V  A  D  F  S  L  T  G  S  G  Y  S  E  I  F  S  R  S  G  R  L  R  D  R  G  G  R  S  E  :  K  P  N  F  K  S  C  *  T  K  A  S  L  D  Q  V  H  L  L  G  V  L  R  F  C  L  *  R  R  R  M  G  V  F  E  C  A  *  T  T  D  N  *  T  R  *  P  *  R  T  S  I  L  F  L  A  L  M  T  C  S  I  S  Y  K  E  L  V  S  S  L  R  L  T  *  D  P  V  I  I  N  *  K  Y  G  Q  R  M  C  Q  R  L  L  L  E  P  G  M  G  I  T  N  L  *  *  C  L  L  V  L  R  M  P  L  L  R  S  *  V  *  *  T  G  F  L  S  Y  I  W  I  Y  L  *  S  Y  L  L  M  I  Y  W  Y  T  Q  R  S  R  R  N  M  R  S  I  *  E  W  Y  W  K  C  *  G  R  K  S  F  M  P  S  S  L  S  V  S  F  G  *  M  Q  C  P  S  W  G  T  W  F  L </first_frame>
            <second_frame>  R  G  R  G  R  G  R  T  F  S  R  G  R  G  R  A  P  S  P  S  D  T  G  A  V  T  P  P  P  T  E  E  V  I  R  E  G  E  D  G  E  N  E  Q  V  Q  N  E  G  L  P  P  Q  P  T  P  E  M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  Q  A  P  P  V  F  S  A  P  T  P  P  V  S  E  V  Q  H  A  A  T  M  A  P  R  M  D  A  S  L  E  I  G  T  F  P  R  L  T  T  G  P  V  M  T  N  D  Q  H  E  I  F  S  K  F  L  K  L  K  P  S  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  V  D  C  H  E  L  L  H  K  M  G  I  V  E  R  F  G  V  E  F  V  S  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  V  E  C  Q  P  I  E  A  P  P  M  T  W  A  S  F  S  S  L  F  M  E  K  Y  I  P  R  T  L  R  D  R  K  R  D  E  F  L  S  L  E  Q  G  R  M  S  V  N  A  Y  E  A  K  F  R  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  R  I  R  R  F  V  R  G  L  R  S  E  L  R  I  S  A  L  Q  V  A  A  T  A  K  S  F  Q  E  V  V  D  F  V  I  E  V  E  G  V  K :   S  P  T  S  R  V  V  E  Q  R  L  H  *  T  K  C  I  S  L  G  C  S  D  F  V  C  E  E  E  G  W  E  F  S  N  V  H  R  L  Q  T  T  K  Q  G  N  H  K  E  Q  V  S  S  S  S  H  *  *  L  V  R  S  V  T  R  S  L  C  L  L  *  D  *  L  E  I  R  L  S  S  I  E  N  T  G  N  G  C  A  K  D  C  F  *  N  Q  V  W  V  L  R  I  C  S  D  V  F  W  S  Y  E  C  P  C  C  V  H  E  F  D  E  R  D  F  *  A  I  S  G  S  I  C  D  R  I  Y  *  *  Y  I  G  I  L  K  D  Q  E  G  T  *  G  A  F  E  N  G  I  G  N  V  E  G  E  K  A  L  C  Q  V  L  *  V  *  V  L  A  R  C  S  V  L  L  G  A  R  G  F   </second_frame>
            <third_frame>   V  V  E  V  V  G  G  R  S  L  E  E  E  D  E  H  L  A  H  L  I  L  G  R  *  L  L  H  R  L  K  K  *  *  E  K  G  R  M  G  K  M  N  K  C  R  M  R  D  C  H  P  N  L  P  Q  R  *  S  I  R  F  S  L  I  L  V  G  C  L  I  K  V  R  H  L  Q  C  F  L  H  Q  H  L  R  F  Q  R  Y  N  M  Q  P  L  W  L  P  A  W  M  P  H  W  K  *  A  H  F  L  V  *  L  Q  G  L  *  *  Q  M  I  S  M  K  F  S  V  S  S  *  N  *  N  L  Q  S  S  R  V  L  S  L  R  M  L  T  I  F  W  L  T  V  M  S  Y  Y  T  R  W  V  *  *  N  G  L  V  L  S  S  *  V  I  S  F  K  G  T  P  K  C  G  G  G  H  M  L  S  V  N  Q  *  R  H  H  L  *  L  G  P  H  S  L  V  C  L  W  R  S  I  S  P  G  L  *  G  I  G  K  G  M  S  S  *  A  *  S  K  V  G  C  R  S  M  H  M  R  L  S  F  V  H  Y  Q  G  M  P  P  N  F  V  S  V  H  K  S  G  F  V  V  L  *  G  G  *  G  Q  S  C  G  F  Q  P  Y  R  *  R  L  Q  R  N  L  F  K  K  W  *  T  S  *  *  R  W  K  E  *   : K  A  Q  L  Q  E  L  L  N  K  G  F  I  R  P  S  A  S  P  W  G  A  P  I  L  F  V  K  K  K  D  G  S  F  R  M  C  I  D  Y  R  Q  L  N  K  V  T  I  K  N  K  Y  P  L  P  R  I  D  D  L  F  D  Q  L  Q  G  A  C  V  F  S  K  I  D  L  R  S  G  Y  H  Q  L  K  I  R  A  T  D  V  P  K  T  A  F  R  T  R  Y  G  Y  Y  E  F  V  V  M  S  F  G  L  T  N  A  P  A  A  F  M  S  L  M  N  G  I  F  K  L  Y  L  D  L  F  V  I  V  F  I  D  D  I  L  V  Y  S  K  I  K  K  E  H  E  E  H  L  R  M  V  L  E  M  L  R  E  K  K  L  Y  A  K  F  S  K  C  E  F  W  L  D  A  V  S  F  L  G  H  V  V  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68227" stop="69110"/>
                    <exon start="70227" stop="70266"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>921</number_coding_nucleotides>
                  <number_encoded_amino_acids>307</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGRGRGRTFSRGRGRAPSPSDTGAVTPPPTEEVIREGEDGENEQVQNEGLPPQPTPEMINQVLAYLSGLSDQGQAPPVFSAPTPPVSEVQHAATMAPRMDASLEIGTFPRLTTGPVMTNDQHEIFSKFLKLKPSVFKGAESEDAYDFLVDCHELLHKMGIVERFGVEFVSYQFQGNAKMWWRSHVECQPIEAPPMTWASFSSLFMEKYIPRTLRDRKRDEFLSLEQGRMSVNAYEAKFRALSRYATQLCFSPQERIRRFVRGLRSELRISALQVAATAKSFQEVVDFVIEVEGVKSPTSRVVEQRLH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="69928" PGL_stop="68208"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69928" e_stop="68208"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.912"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.912">
            <gDNA_exon_boundary e_start="69928" e_stop="68208" e_length="1721"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69928" stop="69602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591718" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69716" stop="68208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581303" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGGATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATGCCCAGAATTACATCGAAGTCAACCATTTCTAAGATAACCAACTCTACATGAGTATTGCTCCCCATAAAAGTTACAAGACAAGACCTATACACCTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAAATTCACAATGTAAATCAAGACCATTAGCAAATGCGGAAGATACATATGAAAATGTAGAGCCAGGGTCAAACAATACAAAATCCATGCAATCACAAACCGAAAGATTACCTGTGATAACAGCATCTGATGTTTCCGCTTCTGACCGCCCGGGGAAAGCGTAACAATGGGCCCTCTCACCTGTCTGTCCGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGCTTGCCCATCACCCCGACCGTTTTGGTGGCCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTTCCATAACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTGGACAATACTTCTTAATGTGTCCAGTCTCCCCACATCCATAACACTCTCTAGATTCGAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCTGAGGGGGAGCCCCAACTACAGTTTGTAGTGAAGACTGAATGGGTCGAACTGAGTAACCTCCGGAGCCCTGTCCTCTCGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTCGATGCCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTATCACGAAGTCTACCACTTCTTGAAAAGATTTCGCTGTAGCCGCTACCTGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCCCTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGGGTGGCATACCTTGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCATGACAGTCAACCAGAAAATCGTAAGCATCCTCAGACTCAGCACCCTTGAAGACTGAAGGTTTCAATTTCAAGAACTTACTGAAAATTTCATGCTGATCATTTGTCATTACAGGCCCTGTAGTCAGACGAGGAAATGTGCCTATTTCCAATGAGGCATCCATGCGGGGAGCCATAGTGGCTGCATGTTGTACCTCTGAAACCGGAGGTGTTGGTGCAGAAAACACTGGAGGTGCCTGACCTTGATCAGACAACCCACTAAGATAAGCGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCAATCCCTCATTCTGCACTTGTTCATTTTCCCCATCCTCCCCTTCTCTTATTACTTCTTCAGTCGGTGGAGGAGTCACCGCCCCAGTATCAGATGGGCTAGGTGCTCGTCCTCTTCCTCTAGAGAACGTCCTCCCACGACCTCTACCACGGCCTCTTGCCGCTGCTCTT</gDNA_template>
            <first_frame> R  I  C  P  R  L  G  *  R  H  S  F  S  I  T  I  Q  D  R  K  I  W  R  K  P  S  H  A  Q  N  Y  I  E  V  N  H  F  *  D  N  Q  L  Y  M  S  I  A  P  H  K  S  Y  K  T  R  P  I  H  L  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  V  K  Q  I  H  N  V  N  Q  D  H  *  Q  M  R  K  I  H  M  K  M  *  S  Q  G  Q  T  I  Q  N  P  C  N  H  K  P  K  D  Y  L  *  *  Q  H  L  M  F  P  L  L  T  A  R  G  K  R  N  N  G  P  S  H  L  S  V  R  C  P  Y  H  V  V  M  *  W  L  Q  L  A  H  H  P  D  R  F  G  G  H  H  Y  L  D  H  H  V  L  Q  N  N  G  L  F  H  N  H  L  Y  L  *  H  L  E  V  C  N  S  V  L  D  N  T  S  *  C  V  Q  S  P  H  I  H  N  T  L  *  I  R  A  *  V  S  Q  R  S  V  D  R  S  E  G  E  P  Q  L  Q  F  V  V  K  T  E  W  V  E  L  S  N  L  R  S  P  V  L  S  S  K  N  H  *  T  H  L  P  F  E  T  S  L  M  S  M  P  W  *  I  H  L  A  S  L  L  P  P  L  S  R  S  L  P  L  L  E  K  I  S  L  *  P  L  P  V  R  L  K  S  A  T  L  T  S  T  P  S  Q  N  D  E  S  A  L  V  D  *  N  K  V  G  W  H  T  L  I  V  H  E  T  *  P  H  M  H  *  P  T  S  Y  L  A  L  G  S  R  T  H  P  F  S  Y  P  S  K  S  G  G  Y  T  S  P  *  T  N  *  R  M  R  P  K  S  *  V  V  P  L  L  V  D  T  Q  H  V  T  A  T  T  F  W  R  S  L  E  T  D  N  S  R  T  Q  H  Q  T  V  L  L  Y  P  S  C  V  V  A  H  D  S  Q  P  E  N  R  K  H  P  Q  T  Q  H  P  *  R  L  K  V  S  I  S  R  T  Y  *  K  F  H  A  D  H  L  S  L  Q  A  L  *  S  D  E  E  M  C  L  F  P  M  R  H  P  C  G  E  P  *  W  L  H  V  V  P  L  K  P  E  V  L  V  Q  K  T  L  E  V  P  D  L  D  Q  T  T  H  *  D  K  R  E  P  D  *  S  S  L  G  *  V  G  V  A  I  P  H  S  A  L  V  H  F  P  H  P  P  L  L  L  L  L  L  Q  S  V  E  E  S  P  P  Q  Y  Q  M  G  *  V  L  V  L  F  L  *  R  T  S  S  H  D  L  Y  H  G  L  L  P  L  L   </first_frame>
            <second_frame>  G  S  V  P  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  K  F  G  E  S  Q  V  M  P  R  I  T  S  K  S  T  I  S  K  I  T  N  S  T  *  V  L  L  P  I  K  V  T  R  Q  D  L  Y  T  F  S  T  I  T  D  S  P  T  G  V  E  T  R  I  G  M  S  S  K  F  T  M  *  I  K  T  I  S  K  C  G  R  Y  I  *  K  C  R  A  R  V  K  Q  Y  K  I  H  A  I  T  N  R  K  I  T  C  D  N  S  I  *  C  F  R  F  *  P  P  G  E  S  V  T  M  G  P  L  T  C  L  S  V  A  P  T  M  L  *  C  S  G  S  S  L  P  I  T  P  T  V  L  V  A  T  I  T  S  T  T  T  S  S  R  I  T  A  S  S  I  T  T  S  T  S  N  I  W  R  S  V  T  L  F  W  T  I  L  L  N  V  S  S  L  P  T  S  I  T  L  S  R  F  E  H  R  S  L  R  E  V  L  T  G  L  R  G  S  P  N  Y  S  L  *  *  R  L  N  G  S  N  *  V  T  S  G  A  L  S  S  R  V  R  T  I  K  L  T  S  L  S  K  P  L  *  C  R  C  H  G  E  F  I  W  L  H  S  F  H  L  Y  H  E  V  Y  H  F  L  K  R  F  R  C  S  R  Y  L  *  G  *  N  P  Q  L  *  P  Q  P  P  H  K  T  T  N  P  L  L  W  T  E  T  K  L  G  G  I  P  *  *  C  T  K  L  S  L  I  C  I  D  R  H  P  T  L  L  *  A  Q  E  L  I  P  F  P  I  P  Q  S  P  G  D  I  L  L  H  K  Q  T  R  E  *  G  P  S  H  R  W  C  L  Y  W  L  T  L  N  M  *  P  P  P  H  F  G  V  P  L  K  L  I  T  H  E  L  N  T  K  P  F  Y  Y  T  H  L  V  *  *  L  M  T  V  N  Q  K  I  V  S  I  L  R  L  S  T  L  E  D  *  R  F  Q  F  Q  E  L  T  E  N  F  M  L  I  I  C  H  Y  R  P  C  S  Q  T  R  K  C  A  Y  F  Q  *  G  I  H  A  G  S  H  S  G  C  M  L  Y  L  *  N  R  R  C  W  C  R  K  H  W  R  C  L  T  L  I  R  Q  P  T  K  I  S  E  N  L  I  D  H  L  W  G  R  L  G  W  Q  S  L  I  L  H  L  F  I  F  P  I  L  P  F  S  Y  Y  F  F  S  R  W  R  S  H  R  P  S  I  R  W  A  R  C  S  S  S  S  S  R  E  R  P  P  T  T  S  T  T  A  S  C  R  C  S  </second_frame>
            <third_frame>   D  L  S  Q  A  W  L  T  S  Q  F  *  H  Y  N  P  R  S  Q  N  L  E  K  A  K  S  C  P  E  L  H  R  S  Q  P  F  L  R  *  P  T  L  H  E  Y  C  S  P  *  K  L  Q  D  K  T  Y  T  P  F  Q  L  S  Q  T  H  P  P  E  *  K  H  E  *  A  C  Q  A  N  S  Q  C  K  S  R  P  L  A  N  A  E  D  T  Y  E  N  V  E  P  G  S  N  N  T  K  S  M  Q  S  Q  T  E  R  L  P  V  I  T  A  S  D  V  S  A  S  D  R  P  G  K  A  *  Q  W  A  L  S  P  V  C  P  L  P  L  P  C  C  D  V  V  A  P  A  C  P  S  P  R  P  F  W  W  P  P  L  P  R  P  P  R  P  P  E  *  R  P  L  P  *  P  P  L  P  L  T  F  G  G  L  *  L  C  F  G  Q  Y  F  L  M  C  P  V  S  P  H  P  *  H  S  L  D  S  S  I  G  L  S  E  K  C  *  P  V  *  G  G  A  P  T  T  V  C  S  E  D  *  M  G  R  T  E  *  P  P  E  P  C  P  L  E  *  E  P  L  N  S  P  P  F  R  N  L  F  D  V  D  A  M  V  N  S  S  G  F  T  P  S  T  S  I  T  K  S  T  T  S  *  K  D  F  A  V  A  A  T  C  K  A  E  I  R  N  S  D  L  N  P  L  T  K  R  R  I  R  S  C  G  L  K  Q  S  W  V  A  Y  L  D  S  A  R  N  L  A  S  Y  A  L  T  D  I  L  P  C  S  R  L  K  N  S  S  L  F  L  S  L  K  V  R  G  I  Y  F  S  I  N  K  L  E  N  E  A  Q  V  I  G  G  A  S  I  G  *  H  S  T  C  D  R  H  H  I  L  A  F  P  *  N  *  *  L  T  N  S  T  P  N  R  S  T  I  P  I  L  C  S  S  S  *  Q  S  T  R  K  S  *  A  S  S  D  S  A  P  L  K  T  E  G  F  N  F  K  N  L  L  K  I  S  C  *  S  F  V  I  T  G  P  V  V  R  R  G  N  V  P  I  S  N  E  A  S  M  R  G  A  I  V  A  A  C  C  T  S  E  T  G  G  V  G  A  E  N  T  G  G  A  *  P  *  S  D  N  P  L  R  *  A  R  T  *  L  I  I  S  G  V  G  W  G  G  N  P  S  F  C  T  C  S  F  S  P  S  S  P  S  L  I  T  S  S  V  G  G  G  V  T  A  P  V  S  D  G  L  G  A  R  P  L  P  L  E  N  V  L  P  R  P  L  P  R  P  L  A  A  A  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69068" stop="68787"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KDFAVAATCKAEIRNSDLNPLTKRRIRSCGLKQSWVAYLDSARNLASYALTDILPCSRLKNSSLFLSLKVRGIYFSINKLENEAQVIGGASIG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68484" stop="68209"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NRRCWCRKHWRCLTLIRQPTKISENLIDHLWGRLGWQSLILHLFIFPILPFSYYFFSRWRSHRPSIRWARCSSSSSRERPPTTSTTASCRCS</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69486" stop="69232"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CSGSSLPITPTVLVATITSTTTSSRITASSITTSTSNIWRSVTLFWTILLNVSSLPTSITLSRFEHRSLREVLTGLRGSPNYSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68405" stop="68208"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIISGVGWGGNPSFCTCSFSPSSPSLITSSVGGGVTAPVSDGLGARPLPLENVLPRPLPRPLAAAL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="70919" PGL_stop="70107"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70919" e_stop="70107"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.936"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.936">
            <gDNA_exon_boundary e_start="70919" e_stop="70107" e_length="813"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70919" stop="70107"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579150" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCCTCATGTTCCTTCTTGATCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAATAGATCCAGATATAGCTTAAAAATCCCGTTCATCAAACTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATACCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCTCCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATGCACATTCGAAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGTTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCAGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTTAAGGTCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTG</gDNA_template>
            <first_frame> R  I  P  *  Q  I  G  G  S  S  *  L  T  Q  Q  S  S  L  F  L  T  H  *  *  V  L  P  N  S  S  L  S  Q  S  *  K  D  P  P  S  L  H  P  *  K  P  R  A  P  R  R  T  L  H  L  A  K  T  H  T  *  R  T  W  H  K  A  F  S  P  S  T  F  P  I  P  F  S  N  A  P  H  V  P  S  *  S  L  S  I  P  I  Y  H  Q  *  I  R  S  Q  I  D  P  D  I  A  *  K  S  R  S  S  N  S  *  T  Q  Q  G  H  S  *  D  Q  K  T  S  L  Q  I  R  N  T  H  T  W  F  *  K  Q  S  L  A  H  P  L  P  V  F  S  I  D  D  N  R  I  S  S  Q  S  *  R  R  H  K  L  L  V  T  D  R  T  S  H  Q  C  E  E  E  D  T  C  S  L  W  L  P  C  L  V  V  C  S  L  C  T  F  E  N  S  H  P  S  S  S  Q  T  K  S  E  H  P  K  E  M  H  L  V  *  *  S  L  C  S  T  T  L  E  V  G  L  L  T  L  L  T  P  Q  E  P  F  Y  K  G  V  *  K  W  G  E  Y  P  V  *  G  Q  Y  R  S  Q  Y  P  Y  L  V  A  Y  Q  E  D  L </first_frame>
            <second_frame>  E  S  L  D  K  S  A  V  V  A  S  *  P  N  K  A  P  Y  F  *  H  I  S  R  S  Y  P  I  L  H  C  L  N  L  R  R  I  H  H  H  S  I  L  R  N  H  V  P  Q  E  G  H  C  I  *  P  K  L  T  L  R  E  L  G  I  K  L  F  L  P  Q  H  F  Q  Y  H  S  Q  M  L  L  M  F  L  L  D  L  *  V  Y  Q  Y  I  I  N  K  Y  D  H  K  *  I  Q  I  *  L  K  N  P  V  H  Q  T  H  E  R  S  R  G  I  R  K  T  K  R  H  H  Y  K  F  V  I  P  I  P  G  S  K  S  S  L  W  H  I  R  C  P  Y  F  Q  L  M  I  T  G  S  Q  V  N  L  R  E  D  T  S  S  L  *  L  I  E  Q  V  I  N  A  R  K  R  I  L  V  L  Y  G  Y  L  V  *  L  S  V  V  Y  A  H  S  K  T  P  I  L  L  L  H  K  Q  N  R  S  T  P  R  R  C  T  W  S  N  E  A  F  V  Q  Q  L  L  K  L  G  F  *  L  S  *  L  R  R  S  H  S  I  R  G  Y  R  N  G  A  S  T  R  F  K  V  N  T  E  V  N  I  P  I  W  W  H  T  R  K  I   </second_frame>
            <third_frame>   N  P  L  T  N  R  R  *  *  L  A  N  P  T  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  T  C  P  K  K  D  T  A  S  S  Q  N  S  H  L  E  N  L  A  *  S  F  F  S  L  N  I  S  N  T  I  L  K  C  S  S  C  S  F  L  I  F  E  Y  T  N  I  S  S  I  N  T  I  T  N  R  S  R  Y  S  L  K  I  P  F  I  K  L  M  N  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  Y  P  Y  L  V  L  K  A  V  F  G  T  S  V  A  R  I  F  N  *  *  *  P  D  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  F  M  V  T  L  F  S  C  L  *  S  M  H  I  R  K  L  P  S  F  F  F  T  N  K  I  G  A  P  Q  G  D  A  L  G  L  M  K  P  L  F  N  N  S  *  S  W  A  F  N  S  L  N  S  A  G  A  I  L  *  G  G  I  E  M  G  R  V  P  G  L  R  S  I  Q  K  S  I  S  L  S  G  G  I  P  G  R  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70722" stop="70525"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFFSLNISNTILKCSSCSFLIFEYTNISSINTITNRSRYSLKIPFIKLMNAAGAFVRPKDITTNS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="72182" PGL_stop="71692"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72182" e_stop="71692"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="72182" e_stop="71692" e_length="491"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72182" stop="71692"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575264" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCCAATTCCGCATGCAATGTTTTCCAAAACTTAGAAGTAAACTGCGTACCTCTATCTGATATGATGAAGAGCAGAACCCCATGCAATTGAACGATTTCTGAGATATAGATCTTGGCTAACTTCTCGGCATTGTAAGTCACCTTAACCGGAATGAAATGAGCAGACTTAGTTAACCTATCAACAATCACCCAAATAGAGTCGTACTTACTCATCGTCTTTGGAAGACCAACCACGAAGTCCATTGCGATTCTCTCCCATTTCCATTCTGGAATGCGCATTCTCTGAAGTGTTCCTCCGGGCCTCTGGTGTTCATACTTTACTTGCTGACAATTTGGACATTTGGCAACAAAATCAACAATGTCGCGCTTCATTCTACTCCACCAAAAGTGTTGCTTTAGGTCACGGCATCTTGGTTGCACCAGGATGTATAGAATATCTGGAACTATGAGCCTCTGTAAGAATAGTGTAAATCAAATCATCAACGCGGGGT</gDNA_template>
            <first_frame> T  Q  F  R  M  Q  C  F  P  K  L  R  S  K  L  R  T  S  I  *  Y  D  E  E  Q  N  P  M  Q  L  N  D  F  *  D  I  D  L  G  *  L  L  G  I  V  S  H  L  N  R  N  E  M  S  R  L  S  *  P  I  N  N  H  P  N  R  V  V  L  T  H  R  L  W  K  T  N  H  E  V  H  C  D  S  L  P  F  P  F  W  N  A  H  S  L  K  C  S  S  G  P  L  V  F  I  L  Y  L  L  T  I  W  T  F  G  N  K  I  N  N  V  A  L  H  S  T  P  P  K  V  L  L  *  V  T  A  S  W  L  H  Q  D  V  *  N  I  W  N  Y  E  P  L  *  E  *  C  K  S  N  H  Q  R  G   </first_frame>
            <second_frame>  P  N  S  A  C  N  V  F  Q  N  L  E  V  N  C  V  P  L  S  D  M  M  K  S  R  T  P  C  N  *  T  I  S  E  I  *  I  L  A  N  F  S  A  L  *  V  T  L  T  G  M  K  *  A  D  L  V  N  L  S  T  I  T  Q  I  E  S  Y  L  L  I  V  F  G  R  P  T  T  K  S  I  A  I  L  S  H  F  H  S  G  M  R  I  L  *  S  V  P  P  G  L  W  C  S  Y  F  T  C  *  Q  F  G  H  L  A  T  K  S  T  M  S  R  F  I  L  L  H  Q  K  C  C  F  R  S  R  H  L  G  C  T  R  M  Y  R  I  S  G  T  M  S  L  C  K  N  S  V  N  Q  I  I  N  A  G  </second_frame>
            <third_frame>   P  I  P  H  A  M  F  S  K  T  *  K  *  T  A  Y  L  Y  L  I  *  *  R  A  E  P  H  A  I  E  R  F  L  R  Y  R  S  W  L  T  S  R  H  C  K  S  P  *  P  E  *  N  E  Q  T  *  L  T  Y  Q  Q  S  P  K  *  S  R  T  Y  S  S  S  L  E  D  Q  P  R  S  P  L  R  F  S  P  I  S  I  L  E  C  A  F  S  E  V  F  L  R  A  S  G  V  H  T  L  L  A  D  N  L  D  I  W  Q  Q  N  Q  Q  C  R  A  S  F  Y  S  T  K  S  V  A  L  G  H  G  I  L  V  A  P  G  C  I  E  Y  L  E  L  *  A  S  V  R  I  V  *  I  K  S  S  T  R  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71985" stop="71734"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRTYSSSLEDQPRSPLRFSPISILECAFSEVFLRASGVHTLLADNLDIWQQNQQCRASFYSTKSVALGHGILVAPGCIEYLEL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72008" stop="71784"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PINNHPNRVVLTHRLWKTNHEVHCDSLPFPFWNAHSLKCSSGPLVFILYLLTIWTFGNKINNVALHSTPPKVLL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="72397" PGL_stop="72221"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72397" e_stop="72221"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="72397" e_stop="72221" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72397" stop="72221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599718" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAAGAAGTTATCCCAATGGCCACCAAATTCTATCACACACACATGAAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</gDNA_template>
            <first_frame> L  H  L  L  P  Y  N  A  S  N  G  A  I  S  M  L  E  *  *  L  L  L  Y  E  N  S  A  K  G  K  K  L  S  Q  W  P  P  N  S  I  T  H  T  *  S  I  S  S  N  T  *  I  V  R  S  D  *  P  S </first_frame>
            <second_frame>  Y  I  S  Y  H  T  M  L  Q  M  E  P  Y  Q  C  L  S  D  S  Y  Y  C  M  K  T  P  L  R  V  R  S  Y  P  N  G  H  Q  I  L  S  H  T  H  E  A  Y  P  P  T  L  E  S  F  A  Q  T  D  H   </second_frame>
            <third_frame>   T  S  P  T  I  Q  C  F  K  W  S  H  I  N  A  *  V  I  A  I  I  V  *  K  L  R  *  G  *  E  V  I  P  M  A  T  K  F  Y  H  T  H  M  K  H  I  L  Q  H  L  N  R  S  L  R  L  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0284G15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="79844" PGL_stop="84657"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79844" e_stop="80375"/>
            <exon e_start="81259" e_stop="81370"/>
            <exon e_start="81977" e_stop="82151"/>
            <exon e_start="82348" e_stop="82516"/>
            <exon e_start="82685" e_stop="82909"/>
            <exon e_start="83096" e_stop="83371"/>
            <exon e_start="83689" e_stop="83967"/>
            <exon e_start="84126" e_stop="84657"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.191" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.957" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.911" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.935" acc_prob="0.997" e_score="0.993"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="79844" e_stop="80375" e_length="532"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.978">
            <gDNA_intron_boundary i_start="80376" i_stop="81258" i_length="883"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="81259" e_stop="81370" e_length="112"/>
          </exon>
          <intron i_serial="2" don_prob="0.191" acc_prob="0.998">
            <gDNA_intron_boundary i_start="81371" i_stop="81976" i_length="606"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="81977" e_stop="82151" e_length="175"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="82152" i_stop="82347" i_length="196"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="82348" e_stop="82516" e_length="169"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.957">
            <gDNA_intron_boundary i_start="82517" i_stop="82684" i_length="168"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="82685" e_stop="82909" e_length="225"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="82910" i_stop="83095" i_length="186"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="83096" e_stop="83371" e_length="276"/>
          </exon>
          <intron i_serial="6" don_prob="0.911" acc_prob="0.995">
            <gDNA_intron_boundary i_start="83372" i_stop="83688" i_length="317"/>
          </intron>
          <exon e_serial="7" e_score="0.993">
            <gDNA_exon_boundary e_start="83689" e_stop="83967" e_length="279"/>
          </exon>
          <intron i_serial="7" don_prob="0.935" acc_prob="0.997">
            <gDNA_intron_boundary i_start="83968" i_stop="84125" i_length="158"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="84126" e_stop="84657" e_length="532"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79844" stop="80375"/>
              <exon start="81259" stop="81370"/>
              <exon start="81977" stop="82151"/>
              <exon start="82348" stop="82516"/>
              <exon start="82685" stop="82909"/>
              <exon start="83096" stop="83371"/>
              <exon start="83689" stop="83967"/>
              <exon start="84126" stop="84657"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575864" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTTTTTTTATTGTCATCCTCGCAATTTTCACCCAAAATCACACGGTCCAATTGGATCCCCAATTTCGGATTGCGATGCTTCTTATAAATACAAACAATTTCTACCATGCTTTCTCCCTCGTTTTCTCCAAACACAAATTTCCTCTATCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAG : GAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGACAGAGCCGGACCGGATTGTTGGCGAATTGCTTCAGCCTGGGGGTTATCTTAAATTGATTGAGTTGGGCATTGAAG : ATTGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA : TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG : GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG : GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTGCAAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAG : CCAGTGGCTTCCACCATAAATACTTTGGCTGGAGCTCTGTATAAGGTGTTCTGTGCTTCTCCTGATCAAGCGAGGAGGGAGATGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAGGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG : TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAAATGTATATTGTGGCATTCACTTTATATCTTAGAGAGTTCAATTTGTACGTCAGTTGTAGCTCTGAGATAGACATCAACGGTTATGTTTCTGTATTGTACATCACATTGATGTATGTATCAGTTTGTTATAAAGGTCTGC</gDNA_template>
            <first_frame> V  F  F  Y  C  H  P  R  N  F  H  P  K  S  H  G  P  I  G  S  P  I  S  D  C  D  A  S  Y  K  Y  K  Q  F  L  P  C  F  L  P  R  F  L  Q  T  Q  I  S  S  I  C  S  L  S  S  T  T  Q  I  I  I  F  S  G  L  *  F  N  Y  K  E  Q  I  E  V  T  F  G  F  F  D  Q  I  F  A  K  Y  T  I  *  S  Y  S  E  R  E  N  G  E  F  H  D  G  *  V  Y  C  S  Q  F  C  C  F  S  I  G  V  P  S  S  L  C  F  A  T  K  N  P  Q  L  *  E  N  G  S  *  I  Y  P  K  M  *  N  P  Q  R  N  F  *  K  I  G  E  R  D  R  C  R  C  Y  N  C  W  S  W  G  C  W  C  C  S  C  S  Y  P  C  *   : G  R  T  K  C  S  R  H  R  K  G  F  D  R  A  G  P  D  C  W  R  I  A  S  A  W  G  L  S  *  I  D  *  V  G  H  *  R :   L  C  *  G  Y  *  C  P  A  G  G  W  I  C  S  F  Q  G  W  K  E  H  K  C  F  L  S  L  E  K  L  P  F  G  C  G  W  E  K  L  S  Q  W  A  L  H  T  E  D  E  R  K  S  S  Y  S  S  Q  :  C  T  I  G  T  R  H  R  N  I  P  D  *  R  K  W  I  H  *  G  C  S  V  Q  N  *  G  W  P  R  T  *  S  T  C  S  S  Y  S  S  L  *  W  V  L  L  K  L  A  T  L  A  L  *  P  *   : G  *  C  S  L  L  L  C  W  S  G  I  G  I  G  E  *  S  T  S  I  P  K  P  W  A  C  Y  S  G  R  S  F  S  H  L  I  L  S  Y  Q  *  H  G  N  S  L  L  G  R  C  T  W  S  K  A  S  F  S  C  *  W  *  Y  G  K  L  F  E  N  Y  G  S  S  P   : G  T  T  *  A  T  *  C  V  S  I  C  N  *  *  G  A  Y  *  N  Y  A  K  Q  E  H  A  S  C  S  L  S  Y  T  W  S  S  V  A  R  R  F  F  Q  H  A  P  S  I  N  W  W  G  N  D  C  C  A  F  R  H  C  S  I  K  E  S  S  Y  A  I  A  R  P  E  *  R  R  *  V  V  *  I  S  G  V  I  L  Y  F  A  Q   : A  S  G  F  H  H  K  Y  F  G  W  S  S  V  *  G  V  L  C  F  S  *  S  S  E  E  G  D  A  R  C  V  F  *  L  F  E  P  W  R  H  L  F  N  W  T  C  S  S  T  L  W  S  *  S  *  S  N  E  L  G  A  P  F  L  C  S  G  R  L  W  S  W  S  F  T  C  T  F  S  F  S  K  E  V  V  D  R  S  *  I  N  I   : V  C  I  R  H  H  I  S  H  H  K  G  R  R  D  P  A  N  V  L  S  N  N  N  T  S  I  S  Q  S  S  S  R  E  D  G  V  R  L  S  R  K  F  V  E  V  L  F  H  E  *  H  *  H  F  C  S  S  F  L  E  A  R  N  V  S  S  T  L  P  S  P  Q  T  L  Q  I  E  *  E  *  R  R  N  L  I  V  G  I  L  Y  Q  K  E  L  Q  V  Y  V  F  I  E  I  Y  L  I  V  G  I  L  Y  Q  K  E  L  Q  V  Y  V  F  I  *  I  *  S  D  S  L  L  C  R  N  V  Y  C  G  I  H  F  I  S  *  R  V  Q  F  V  R  Q  L  *  L  *  D  R  H  Q  R  L  C  F  C  I  V  H  H  I  D  V  C  I  S  L  L  *  R  S   </first_frame>
            <second_frame>  F  F  F  I  V  I  L  A  I  F  T  Q  N  H  T  V  Q  L  D  P  Q  F  R  I  A  M  L  L  I  N  T  N  N  F  Y  H  A  F  S  L  V  F  S  K  H  K  F  P  L  S  A  A  S  P  P  P  P  K  S  S  F  S  Q  A  S  D  S  I  T  K  N  K  L  K  L  P  L  V  S  L  T  K  S  L  P  N  T  Q  F  D  L  I  Q  S  E  K  M  V  N  F  M  M  D  K  Y  I  V  P  S  F  V  V  S  L  L  G  F  L  L  L  Y  V  L  R  P  R  T  P  N  Y  K  K  M  D  L  K  S  T  R  K  C  E  T  H  N  V  I  S  R  K  L  E  K  G  T  D  A  D  V  I  I  V  G  A  G  V  A  G  A  A  L  A  H  T  L  A  K  :  E  G  R  N  V  H  V  I  E  R  D  L  T  E  P  D  R  I  V  G  E  L  L  Q  P  G  G  Y  L  K  L  I  E  L  G  I  E   : D  C  V  E  D  I  D  A  Q  R  V  V  G  Y  A  L  F  K  D  G  K  S  T  N  V  S  Y  P  L  K  N  F  H  S  D  V  A  G  R  S  F  H  N  G  R  F  I  Q  K  M  R  E  K  A  A  T  L  P  N :   V  R  L  E  Q  G  T  V  T  S  L  I  E  E  N  G  S  I  K  G  V  Q  Y  K  T  K  A  G  Q  E  L  K  A  H  A  P  L  T  V  V  C  D  G  C  F  S  N  L  R  R  S  L  C  D  P  K  :  V  D  V  P  S  C  F  V  G  L  V  L  E  L  E  N  D  R  L  P  Y  P  N  H  G  H  V  I  L  A  D  P  S  P  I  L  F  Y  P  I  S  S  T  E  I  R  C  L  V  D  V  P  G  Q  K  L  P  S  L  A  N  G  D  M  A  N  Y  L  K  T  M  V  A  P  Q  :  V  P  P  E  L  R  D  A  F  L  S  A  I  D  K  G  H  I  K  T  M  P  N  R  S  M  P  A  A  P  Y  P  T  P  G  A  L  L  L  G  D  S  F  N  M  R  H  P  L  T  G  G  G  M  T  V  A  L  S  D  I  A  V  L  R  N  L  L  M  P  L  Q  D  L  N  D  A  D  E  L  C  K  Y  L  E  S  F  Y  T  L  R  K  :  P  V  A  S  T  I  N  T  L  A  G  A  L  Y  K  V  F  C  A  S  P  D  Q  A  R  R  E  M  R  D  A  C  F  D  Y  L  S  L  G  G  T  C  S  T  G  P  V  A  L  L  S  G  L  D  P  N  P  M  S  L  V  L  H  F  F  A  V  A  V  Y  G  V  G  R  L  L  V  P  F  P  S  P  K  K  L  W  I  G  A  K  L  I  L  :  S  A  S  G  I  I  F  P  I  I  K  A  E  G  I  R  Q  M  F  F  P  T  T  I  P  A  Y  H  R  A  P  P  V  K  T  E  S  D  *  A  E  N  L  L  K  F  C  S  M  N  S  I  N  I  F  A  V  P  F  S  K  H  E  M  *  V  P  L  S  P  H  P  K  P  Y  K  *  N  K  N  D  D  E  T  L  L  *  A  Y  Y  T  K  R  N  F  K  C  T  Y  S  L  K  S  T  L  L  *  A  Y  Y  T  K  R  N  F  K  C  T  Y  S  F  K  S  S  Q  T  P  Y  S  V  E  M  Y  I  V  A  F  T  L  Y  L  R  E  F  N  L  Y  V  S  C  S  S  E  I  D  I  N  G  Y  V  S  V  L  Y  I  T  L  M  Y  V  S  V  C  Y  K  G  L  </second_frame>
            <third_frame>   F  F  L  L  S  S  S  Q  F  S  P  K  I  T  R  S  N  W  I  P  N  F  G  L  R  C  F  L  *  I  Q  T  I  S  T  M  L  S  P  S  F  S  P  N  T  N  F  L  Y  L  Q  P  L  L  H  H  P  N  H  H  F  L  R  P  L  I  Q  L  Q  R  T  N  *  S  Y  L  W  F  L  *  P  N  L  C  Q  I  H  N  L  I  L  F  R  A  R  K  W  *  I  S  *  W  I  S  I  L  F  P  V  L  L  F  L  Y  W  G  S  F  F  F  M  F  C  D  Q  E  P  P  I  I  R  K  W  I  L  N  L  P  E  N  V  K  P  T  T  *  F  L  E  N  W  R  K  G  P  M  P  M  L  *  L  L  E  L  G  L  L  V  L  L  L  L  I  P  L  L  R :   K  D  E  M  F  T  S  S  K  G  I  *  Q  S  R  T  G  L  L  A  N  C  F  S  L  G  V  I  L  N  *  L  S  W  A  L  K  :  I  V  L  R  I  L  M  P  S  G  W  L  D  M  L  F  S  R  M  E  R  A  Q  M  F  P  I  P  *  K  T  S  I  R  M  W  L  G  E  A  F  T  M  G  A  S  Y  R  R  *  E  K  K  Q  L  L  F  P   : M  Y  D  W  N  K  A  P  *  H  P  *  L  K  K  M  D  P  L  R  V  F  S  T  K  L  R  L  A  K  N  L  K  H  M  L  L  L  Q  *  F  V  M  G  A  S  Q  T  C  D  A  R  F  V  T  L  R :   L  M  F  P  L  A  L  L  V  W  Y  W  N  W  R  M  I  D  F  H  T  Q  T  M  G  M  L  F  W  Q  I  L  L  P  S  Y  F  I  L  S  V  A  R  K  F  A  A  W  S  M  Y  L  V  K  S  F  L  L  L  L  M  V  I  W  Q  I  I  *  K  L  W  *  L  P  R :   Y  H  L  S  Y  V  M  R  F  Y  L  Q  L  I  R  G  I  L  K  L  C  Q  T  G  A  C  Q  L  L  P  I  L  H  L  E  L  C  C  *  A  I  L  S  T  C  A  I  H  *  L  V  G  E  *  L  L  R  F  Q  T  L  Q  Y  *  G  I  F  L  C  H  C  K  T  *  M  T  Q  M  S  C  V  N  I  W  S  H  F  I  L  C  A  S :   Q  W  L  P  P  *  I  L  W  L  E  L  C  I  R  C  S  V  L  L  L  I  K  R  G  G  R  C  E  M  R  V  L  T  I  *  A  L  E  A  L  V  Q  L  D  L  *  L  Y  S  L  V  L  I  L  I  Q  *  A  W  C  S  I  S  L  Q  W  P  F  M  E  L  V  V  Y  L  Y  L  F  L  L  Q  R  S  C  G  S  E  L  N  *  Y  C :   L  H  Q  A  S  Y  F  P  S  *  R  Q  K  G  S  G  K  C  S  F  Q  Q  Q  Y  Q  H  I  T  E  L  L  P  *  R  R  S  Q  I  K  Q  K  I  C  *  S  F  V  P  *  I  A  L  T  F  L  Q  F  L  S  R  S  T  K  C  K  F  H  S  P  L  T  P  N  P  T  N  R  I  R  M  T  T  K  P  Y  C  R  H  I  I  P  K  G  T  S  S  V  R  I  H  *  N  L  P  Y  C  R  H  I  I  P  K  G  T  S  S  V  R  I  H  L  N  L  V  R  L  P  T  L  *  K  C  I  L  W  H  S  L  Y  I  L  E  S  S  I  C  T  S  V  V  A  L  R  *  T  S  T  V  M  F  L  Y  C  T  S  H  *  C  M  Y  Q  F  V  I  K  V  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79845" stop="80375"/>
                    <exon start="81259" stop="81370"/>
                    <exon start="81977" stop="82151"/>
                    <exon start="82348" stop="82516"/>
                    <exon start="82685" stop="82909"/>
                    <exon start="83096" stop="83371"/>
                    <exon start="83689" stop="83967"/>
                    <exon start="84126" stop="84242"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1881</number_coding_nucleotides>
                  <number_encoded_amino_acids>627</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFFIVILAIFTQNHTVQLDPQFRIAMLLINTNNFYHAFSLVFSKHKFPLSAASPPPPKSSFSQASDSITKNKLKLPLVSLTKSLPNTQFDLIQSEKMVNFMMDKYIVPSFVVSLLGFLLLYVLRPRTPNYKKMDLKSTRKCETHNVISRKLEKGTDADVIIVGAGVAGAALAHTLAKEGRNVHVIERDLTEPDRIVGELLQPGGYLKLIELGIEDCVEDIDAQRVVGYALFKDGKSTNVSYPLKNFHSDVAGRSFHNGRFIQKMREKAATLPNVRLEQGTVTSLIEENGSIKGVQYKTKAGQELKAHAPLTVVCDGCFSNLRRSLCDPKVDVPSCFVGLVLELENDRLPYPNHGHVILADPSPILFYPISSTEIRCLVDVPGQKLPSLANGDMANYLKTMVAPQVPPELRDAFLSAIDKGHIKTMPNRSMPAAPYPTPGALLLGDSFNMRHPLTGGGMTVALSDIAVLRNLLMPLQDLNDADELCKYLESFYTLRKPVASTINTLAGALYKVFCASPDQARREMRDACFDYLSLGGTCSTGPVALLSGLDPNPMSLVLHFFAVAVYGVGRLLVPFPSPKKLWIGAKLILSASGIIFPIIKAEGIRQMFFPTTIPAYHRAPPVKTESD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84447" stop="84656"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AYYTKRNFKCTYSFKSSQTPYSVEMYIVAFTLYLREFNLYVSCSSEIDINGYVSVLYITLMYVSVCYKGL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="88477" PGL_stop="87987"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88477" e_stop="87987"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="88477" e_stop="87987" e_length="491"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88477" stop="87987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575264" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCCAATTCCGCATGCAATGTTTTCCAAAACTTAGAAGTAAACTGCGTACCTCTATCTGATATGATGAAGAGCAGAACCCCATGCAATTGAACGATTTCTGAGATATAGATCTTGGCTAACTTCTCGGCATTGTAAGTCACCTTAACCGGAATGAAATGAGCAGACTTAGTTAACCTATCAACAATCACCCAAATAGAGTCGTACTTACTCATCGTCTTTGGAAGACCAACCACGAAGTCCATTGCGATTCTCTCCCATTTCCATTCTGGAATGCGCATTCTCTGAAGTGTTCCTCCGGGCCTCTGGTGTTCATACTTTACTTGCTGACAATTTGGACATTTGGCAACAAAATCAACAATGTCGCGCTTCATTCTACTCCACCAAAAGTGTTGCTTTAGGTCACGGCATCTTGGTTGCACCAGGATGTATAGAATATCTGGAACTATGAGCCTCTGTAAGAATAGTGTAAATCAAATCATCAACGCGGGGT</gDNA_template>
            <first_frame> T  Q  F  R  M  Q  C  F  P  K  L  R  S  K  L  R  T  S  I  *  Y  D  E  E  Q  N  P  M  Q  L  N  D  F  *  D  I  D  L  G  *  L  L  G  I  V  S  H  L  N  R  N  E  M  S  R  L  S  *  P  I  N  N  H  P  N  R  V  V  L  T  H  R  L  W  K  T  N  H  E  V  H  C  D  S  L  P  F  P  F  W  N  A  H  S  L  K  C  S  S  G  P  L  V  F  I  L  Y  L  L  T  I  W  T  F  G  N  K  I  N  N  V  A  L  H  S  T  P  P  K  V  L  L  *  V  T  A  S  W  L  H  Q  D  V  *  N  I  W  N  Y  E  P  L  *  E  *  C  K  S  N  H  Q  R  G   </first_frame>
            <second_frame>  P  N  S  A  C  N  V  F  Q  N  L  E  V  N  C  V  P  L  S  D  M  M  K  S  R  T  P  C  N  *  T  I  S  E  I  *  I  L  A  N  F  S  A  L  *  V  T  L  T  G  M  K  *  A  D  L  V  N  L  S  T  I  T  Q  I  E  S  Y  L  L  I  V  F  G  R  P  T  T  K  S  I  A  I  L  S  H  F  H  S  G  M  R  I  L  *  S  V  P  P  G  L  W  C  S  Y  F  T  C  *  Q  F  G  H  L  A  T  K  S  T  M  S  R  F  I  L  L  H  Q  K  C  C  F  R  S  R  H  L  G  C  T  R  M  Y  R  I  S  G  T  M  S  L  C  K  N  S  V  N  Q  I  I  N  A  G  </second_frame>
            <third_frame>   P  I  P  H  A  M  F  S  K  T  *  K  *  T  A  Y  L  Y  L  I  *  *  R  A  E  P  H  A  I  E  R  F  L  R  Y  R  S  W  L  T  S  R  H  C  K  S  P  *  P  E  *  N  E  Q  T  *  L  T  Y  Q  Q  S  P  K  *  S  R  T  Y  S  S  S  L  E  D  Q  P  R  S  P  L  R  F  S  P  I  S  I  L  E  C  A  F  S  E  V  F  L  R  A  S  G  V  H  T  L  L  A  D  N  L  D  I  W  Q  Q  N  Q  Q  C  R  A  S  F  Y  S  T  K  S  V  A  L  G  H  G  I  L  V  A  P  G  C  I  E  Y  L  E  L  *  A  S  V  R  I  V  *  I  K  S  S  T  R  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88280" stop="88029"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRTYSSSLEDQPRSPLRFSPISILECAFSEVFLRASGVHTLLADNLDIWQQNQQCRASFYSTKSVALGHGILVAPGCIEYLEL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88303" stop="88079"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PINNHPNRVVLTHRLWKTNHEVHCDSLPFPFWNAHSLKCSSGPLVFILYLLTIWTFGNKINNVALHSTPPKVLL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="96138" PGL_stop="100951"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="96138" e_stop="96669"/>
            <exon e_start="97553" e_stop="97664"/>
            <exon e_start="98271" e_stop="98445"/>
            <exon e_start="98642" e_stop="98810"/>
            <exon e_start="98979" e_stop="99203"/>
            <exon e_start="99390" e_stop="99665"/>
            <exon e_start="99983" e_stop="100261"/>
            <exon e_start="100420" e_stop="100951"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.191" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.957" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.911" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.935" acc_prob="0.997" e_score="0.993"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="96138" e_stop="96669" e_length="532"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.978">
            <gDNA_intron_boundary i_start="96670" i_stop="97552" i_length="883"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="97553" e_stop="97664" e_length="112"/>
          </exon>
          <intron i_serial="2" don_prob="0.191" acc_prob="0.998">
            <gDNA_intron_boundary i_start="97665" i_stop="98270" i_length="606"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="98271" e_stop="98445" e_length="175"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.993">
            <gDNA_intron_boundary i_start="98446" i_stop="98641" i_length="196"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="98642" e_stop="98810" e_length="169"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.957">
            <gDNA_intron_boundary i_start="98811" i_stop="98978" i_length="168"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="98979" e_stop="99203" e_length="225"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="99204" i_stop="99389" i_length="186"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="99390" e_stop="99665" e_length="276"/>
          </exon>
          <intron i_serial="6" don_prob="0.911" acc_prob="0.995">
            <gDNA_intron_boundary i_start="99666" i_stop="99982" i_length="317"/>
          </intron>
          <exon e_serial="7" e_score="0.993">
            <gDNA_exon_boundary e_start="99983" e_stop="100261" e_length="279"/>
          </exon>
          <intron i_serial="7" don_prob="0.935" acc_prob="0.997">
            <gDNA_intron_boundary i_start="100262" i_stop="100419" i_length="158"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="100420" e_stop="100951" e_length="532"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96138" stop="96669"/>
              <exon start="97553" stop="97664"/>
              <exon start="98271" stop="98445"/>
              <exon start="98642" stop="98810"/>
              <exon start="98979" stop="99203"/>
              <exon start="99390" stop="99665"/>
              <exon start="99983" stop="100261"/>
              <exon start="100420" stop="100951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575864" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTTTTTTTATTGTCATCCTCGCAATTTTCACCCAAAATCACACGGTCCAATTGGATCCCCAATTTCGGATTGCGATGCTTCTTATAAATACAAACAATTTCTACCATGCTTTCTCCCTCGTTTTCTCCAAACACAAATTTCCTCTATCTGCAGCCTCTCCTCCACCACCCAAATCATCATTTTCTCAGGCCTCTGATTCAATTACAAAGAACAAATTGAAGTTACCTTTGGTTTCTTTGACCAAATCTTTGCCAAATACACAATTTGATCTTATTCAGAGCGAGAAAATGGTGAATTTCATGATGGATAAGTATATTGTTCCCAGTTTTGTTGTTTCTCTATTGGGGTTCCTTCTTCTTTATGTTTTGCGACCAAGAACCCCCAATTATAAGAAAATGGATCTTAAATCTACCCGAAAATGTGAAACCCACAACGTAATTTCTAGAAAATTGGAGAAAGGGACCGATGCCGATGTTATAATTGTTGGAGCTGGGGTTGCTGGTGCTGCTCTTGCTCATACCCTTGCTAAG : GAAGGACGAAATGTTCACGTCATCGAAAGGGATTTGACAGAGCCGGACCGGATTGTTGGCGAATTGCTTCAGCCTGGGGGTTATCTTAAATTGATTGAGTTGGGCATTGAAG : ATTGTGTTGAGGATATTGATGCCCAGCGGGTGGTTGGATATGCTCTTTTCAAGGATGGAAAGAGCACAAATGTTTCCTATCCCTTGAAAAACTTCCATTCGGATGTGGCTGGGAGAAGCTTTCACAATGGGCGCTTCATACAGAAGATGAGAGAAAAAGCAGCTACTCTTCCCAA : TGTACGATTGGAACAAGGCACCGTAACATCCCTGATTGAAGAAAATGGATCCATTAAGGGTGTTCAGTACAAAACTAAGGCTGGCCAAGAACTTAAAGCACATGCTCCTCTTACAGTAGTTTGTGATGGGTGCTTCTCAAACTTGCGACGCTCGCTTTGTGACCCTAAG : GTTGATGTTCCCTCTTGCTTTGTTGGTCTGGTATTGGAATTGGAGAATGATCGACTTCCATACCCAAACCATGGGCATGTTATTCTGGCAGATCCTTCTCCCATCTTATTTTATCCTATCAGTAGCACGGAAATTCGCTGCTTGGTCGATGTACCTGGTCAAAAGCTTCCTTCTCTTGCTAATGGTGATATGGCAAATTATTTGAAAACTATGGTAGCTCCCCAG : GTACCACCTGAGCTACGTGATGCGTTTCTATCTGCAATTGATAAGGGGCATATTAAAACTATGCCAAACAGGAGCATGCCAGCTGCTCCCTATCCTACACCTGGAGCTCTGTTGCTAGGCGATTCTTTCAACATGCGCCATCCATTAACTGGTGGGGGAATGACTGTTGCGCTTTCAGACATTGCAGTATTAAGGAATCTTCTTATGCCATTGCAAGACCTGAATGACGCAGATGAGTTGTGTAAATATCTGGAGTCATTTTATACTTTGCGCAAG : CCAGTGGCTTCCACCATAAATACTTTGGCTGGAGCTCTGTATAAGGTGTTCTGTGCTTCTCCTGATCAAGCGAGGAGGGAGATGCGAGATGCGTGTTTTGACTATTTGAGCCTTGGAGGCACTTGTTCAACTGGACCTGTAGCTCTACTCTCTGGTCTTGATCCTAATCCAATGAGCTTGGTGCTCCATTTCTTTGCAGTGGCCGTTTATGGAGTTGGTCGTTTACTTGTACCTTTTCCTTCTCCAAAGAAGTTGTGGATCGGAGCTAAATTAATATTG : TCTGCATCAGGCATCATATTTCCCATCATAAAGGCAGAAGGGATCCGGCAAATGTTCTTTCCAACAACAATACCAGCATATCACAGAGCTCCTCCCGTGAAGACGGAGTCAGATTAAGCAGAAAATTTGTTGAAGTTTTGTTCCATGAATAGCATTAACATTTTTGCAGTTCCTTTCTCGAAGCACGAAATGTAAGTTCCACTCTCCCCTCACCCCAAACCCTACAAATAGAATAAGAATGACGACGAAACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTGAAATCTACCTTATTGTAGGCATATTATACCAAAAGGAACTTCAAGTGTACGTATTCATTTAAATCTAGTCAGACTCCCTACTCTGTAGAAATGTATATTGTGGCATTCACTTTATATCTTAGAGAGTTCAATTTGTACGTCAGTTGTAGCTCTGAGATAGACATCAACGGTTATGTTTCTGTATTGTACATCACATTGATGTATGTATCAGTTTGTTATAAAGGTCTGC</gDNA_template>
            <first_frame> V  F  F  Y  C  H  P  R  N  F  H  P  K  S  H  G  P  I  G  S  P  I  S  D  C  D  A  S  Y  K  Y  K  Q  F  L  P  C  F  L  P  R  F  L  Q  T  Q  I  S  S  I  C  S  L  S  S  T  T  Q  I  I  I  F  S  G  L  *  F  N  Y  K  E  Q  I  E  V  T  F  G  F  F  D  Q  I  F  A  K  Y  T  I  *  S  Y  S  E  R  E  N  G  E  F  H  D  G  *  V  Y  C  S  Q  F  C  C  F  S  I  G  V  P  S  S  L  C  F  A  T  K  N  P  Q  L  *  E  N  G  S  *  I  Y  P  K  M  *  N  P  Q  R  N  F  *  K  I  G  E  R  D  R  C  R  C  Y  N  C  W  S  W  G  C  W  C  C  S  C  S  Y  P  C  *   : G  R  T  K  C  S  R  H  R  K  G  F  D  R  A  G  P  D  C  W  R  I  A  S  A  W  G  L  S  *  I  D  *  V  G  H  *  R :   L  C  *  G  Y  *  C  P  A  G  G  W  I  C  S  F  Q  G  W  K  E  H  K  C  F  L  S  L  E  K  L  P  F  G  C  G  W  E  K  L  S  Q  W  A  L  H  T  E  D  E  R  K  S  S  Y  S  S  Q  :  C  T  I  G  T  R  H  R  N  I  P  D  *  R  K  W  I  H  *  G  C  S  V  Q  N  *  G  W  P  R  T  *  S  T  C  S  S  Y  S  S  L  *  W  V  L  L  K  L  A  T  L  A  L  *  P  *   : G  *  C  S  L  L  L  C  W  S  G  I  G  I  G  E  *  S  T  S  I  P  K  P  W  A  C  Y  S  G  R  S  F  S  H  L  I  L  S  Y  Q  *  H  G  N  S  L  L  G  R  C  T  W  S  K  A  S  F  S  C  *  W  *  Y  G  K  L  F  E  N  Y  G  S  S  P   : G  T  T  *  A  T  *  C  V  S  I  C  N  *  *  G  A  Y  *  N  Y  A  K  Q  E  H  A  S  C  S  L  S  Y  T  W  S  S  V  A  R  R  F  F  Q  H  A  P  S  I  N  W  W  G  N  D  C  C  A  F  R  H  C  S  I  K  E  S  S  Y  A  I  A  R  P  E  *  R  R  *  V  V  *  I  S  G  V  I  L  Y  F  A  Q   : A  S  G  F  H  H  K  Y  F  G  W  S  S  V  *  G  V  L  C  F  S  *  S  S  E  E  G  D  A  R  C  V  F  *  L  F  E  P  W  R  H  L  F  N  W  T  C  S  S  T  L  W  S  *  S  *  S  N  E  L  G  A  P  F  L  C  S  G  R  L  W  S  W  S  F  T  C  T  F  S  F  S  K  E  V  V  D  R  S  *  I  N  I   : V  C  I  R  H  H  I  S  H  H  K  G  R  R  D  P  A  N  V  L  S  N  N  N  T  S  I  S  Q  S  S  S  R  E  D  G  V  R  L  S  R  K  F  V  E  V  L  F  H  E  *  H  *  H  F  C  S  S  F  L  E  A  R  N  V  S  S  T  L  P  S  P  Q  T  L  Q  I  E  *  E  *  R  R  N  L  I  V  G  I  L  Y  Q  K  E  L  Q  V  Y  V  F  I  E  I  Y  L  I  V  G  I  L  Y  Q  K  E  L  Q  V  Y  V  F  I  *  I  *  S  D  S  L  L  C  R  N  V  Y  C  G  I  H  F  I  S  *  R  V  Q  F  V  R  Q  L  *  L  *  D  R  H  Q  R  L  C  F  C  I  V  H  H  I  D  V  C  I  S  L  L  *  R  S   </first_frame>
            <second_frame>  F  F  F  I  V  I  L  A  I  F  T  Q  N  H  T  V  Q  L  D  P  Q  F  R  I  A  M  L  L  I  N  T  N  N  F  Y  H  A  F  S  L  V  F  S  K  H  K  F  P  L  S  A  A  S  P  P  P  P  K  S  S  F  S  Q  A  S  D  S  I  T  K  N  K  L  K  L  P  L  V  S  L  T  K  S  L  P  N  T  Q  F  D  L  I  Q  S  E  K  M  V  N  F  M  M  D  K  Y  I  V  P  S  F  V  V  S  L  L  G  F  L  L  L  Y  V  L  R  P  R  T  P  N  Y  K  K  M  D  L  K  S  T  R  K  C  E  T  H  N  V  I  S  R  K  L  E  K  G  T  D  A  D  V  I  I  V  G  A  G  V  A  G  A  A  L  A  H  T  L  A  K  :  E  G  R  N  V  H  V  I  E  R  D  L  T  E  P  D  R  I  V  G  E  L  L  Q  P  G  G  Y  L  K  L  I  E  L  G  I  E   : D  C  V  E  D  I  D  A  Q  R  V  V  G  Y  A  L  F  K  D  G  K  S  T  N  V  S  Y  P  L  K  N  F  H  S  D  V  A  G  R  S  F  H  N  G  R  F  I  Q  K  M  R  E  K  A  A  T  L  P  N :   V  R  L  E  Q  G  T  V  T  S  L  I  E  E  N  G  S  I  K  G  V  Q  Y  K  T  K  A  G  Q  E  L  K  A  H  A  P  L  T  V  V  C  D  G  C  F  S  N  L  R  R  S  L  C  D  P  K  :  V  D  V  P  S  C  F  V  G  L  V  L  E  L  E  N  D  R  L  P  Y  P  N  H  G  H  V  I  L  A  D  P  S  P  I  L  F  Y  P  I  S  S  T  E  I  R  C  L  V  D  V  P  G  Q  K  L  P  S  L  A  N  G  D  M  A  N  Y  L  K  T  M  V  A  P  Q  :  V  P  P  E  L  R  D  A  F  L  S  A  I  D  K  G  H  I  K  T  M  P  N  R  S  M  P  A  A  P  Y  P  T  P  G  A  L  L  L  G  D  S  F  N  M  R  H  P  L  T  G  G  G  M  T  V  A  L  S  D  I  A  V  L  R  N  L  L  M  P  L  Q  D  L  N  D  A  D  E  L  C  K  Y  L  E  S  F  Y  T  L  R  K  :  P  V  A  S  T  I  N  T  L  A  G  A  L  Y  K  V  F  C  A  S  P  D  Q  A  R  R  E  M  R  D  A  C  F  D  Y  L  S  L  G  G  T  C  S  T  G  P  V  A  L  L  S  G  L  D  P  N  P  M  S  L  V  L  H  F  F  A  V  A  V  Y  G  V  G  R  L  L  V  P  F  P  S  P  K  K  L  W  I  G  A  K  L  I  L  :  S  A  S  G  I  I  F  P  I  I  K  A  E  G  I  R  Q  M  F  F  P  T  T  I  P  A  Y  H  R  A  P  P  V  K  T  E  S  D  *  A  E  N  L  L  K  F  C  S  M  N  S  I  N  I  F  A  V  P  F  S  K  H  E  M  *  V  P  L  S  P  H  P  K  P  Y  K  *  N  K  N  D  D  E  T  L  L  *  A  Y  Y  T  K  R  N  F  K  C  T  Y  S  L  K  S  T  L  L  *  A  Y  Y  T  K  R  N  F  K  C  T  Y  S  F  K  S  S  Q  T  P  Y  S  V  E  M  Y  I  V  A  F  T  L  Y  L  R  E  F  N  L  Y  V  S  C  S  S  E  I  D  I  N  G  Y  V  S  V  L  Y  I  T  L  M  Y  V  S  V  C  Y  K  G  L  </second_frame>
            <third_frame>   F  F  L  L  S  S  S  Q  F  S  P  K  I  T  R  S  N  W  I  P  N  F  G  L  R  C  F  L  *  I  Q  T  I  S  T  M  L  S  P  S  F  S  P  N  T  N  F  L  Y  L  Q  P  L  L  H  H  P  N  H  H  F  L  R  P  L  I  Q  L  Q  R  T  N  *  S  Y  L  W  F  L  *  P  N  L  C  Q  I  H  N  L  I  L  F  R  A  R  K  W  *  I  S  *  W  I  S  I  L  F  P  V  L  L  F  L  Y  W  G  S  F  F  F  M  F  C  D  Q  E  P  P  I  I  R  K  W  I  L  N  L  P  E  N  V  K  P  T  T  *  F  L  E  N  W  R  K  G  P  M  P  M  L  *  L  L  E  L  G  L  L  V  L  L  L  L  I  P  L  L  R :   K  D  E  M  F  T  S  S  K  G  I  *  Q  S  R  T  G  L  L  A  N  C  F  S  L  G  V  I  L  N  *  L  S  W  A  L  K  :  I  V  L  R  I  L  M  P  S  G  W  L  D  M  L  F  S  R  M  E  R  A  Q  M  F  P  I  P  *  K  T  S  I  R  M  W  L  G  E  A  F  T  M  G  A  S  Y  R  R  *  E  K  K  Q  L  L  F  P   : M  Y  D  W  N  K  A  P  *  H  P  *  L  K  K  M  D  P  L  R  V  F  S  T  K  L  R  L  A  K  N  L  K  H  M  L  L  L  Q  *  F  V  M  G  A  S  Q  T  C  D  A  R  F  V  T  L  R :   L  M  F  P  L  A  L  L  V  W  Y  W  N  W  R  M  I  D  F  H  T  Q  T  M  G  M  L  F  W  Q  I  L  L  P  S  Y  F  I  L  S  V  A  R  K  F  A  A  W  S  M  Y  L  V  K  S  F  L  L  L  L  M  V  I  W  Q  I  I  *  K  L  W  *  L  P  R :   Y  H  L  S  Y  V  M  R  F  Y  L  Q  L  I  R  G  I  L  K  L  C  Q  T  G  A  C  Q  L  L  P  I  L  H  L  E  L  C  C  *  A  I  L  S  T  C  A  I  H  *  L  V  G  E  *  L  L  R  F  Q  T  L  Q  Y  *  G  I  F  L  C  H  C  K  T  *  M  T  Q  M  S  C  V  N  I  W  S  H  F  I  L  C  A  S :   Q  W  L  P  P  *  I  L  W  L  E  L  C  I  R  C  S  V  L  L  L  I  K  R  G  G  R  C  E  M  R  V  L  T  I  *  A  L  E  A  L  V  Q  L  D  L  *  L  Y  S  L  V  L  I  L  I  Q  *  A  W  C  S  I  S  L  Q  W  P  F  M  E  L  V  V  Y  L  Y  L  F  L  L  Q  R  S  C  G  S  E  L  N  *  Y  C :   L  H  Q  A  S  Y  F  P  S  *  R  Q  K  G  S  G  K  C  S  F  Q  Q  Q  Y  Q  H  I  T  E  L  L  P  *  R  R  S  Q  I  K  Q  K  I  C  *  S  F  V  P  *  I  A  L  T  F  L  Q  F  L  S  R  S  T  K  C  K  F  H  S  P  L  T  P  N  P  T  N  R  I  R  M  T  T  K  P  Y  C  R  H  I  I  P  K  G  T  S  S  V  R  I  H  *  N  L  P  Y  C  R  H  I  I  P  K  G  T  S  S  V  R  I  H  L  N  L  V  R  L  P  T  L  *  K  C  I  L  W  H  S  L  Y  I  L  E  S  S  I  C  T  S  V  V  A  L  R  *  T  S  T  V  M  F  L  Y  C  T  S  H  *  C  M  Y  Q  F  V  I  K  V  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96139" stop="96669"/>
                    <exon start="97553" stop="97664"/>
                    <exon start="98271" stop="98445"/>
                    <exon start="98642" stop="98810"/>
                    <exon start="98979" stop="99203"/>
                    <exon start="99390" stop="99665"/>
                    <exon start="99983" stop="100261"/>
                    <exon start="100420" stop="100536"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1881</number_coding_nucleotides>
                  <number_encoded_amino_acids>627</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFFIVILAIFTQNHTVQLDPQFRIAMLLINTNNFYHAFSLVFSKHKFPLSAASPPPPKSSFSQASDSITKNKLKLPLVSLTKSLPNTQFDLIQSEKMVNFMMDKYIVPSFVVSLLGFLLLYVLRPRTPNYKKMDLKSTRKCETHNVISRKLEKGTDADVIIVGAGVAGAALAHTLAKEGRNVHVIERDLTEPDRIVGELLQPGGYLKLIELGIEDCVEDIDAQRVVGYALFKDGKSTNVSYPLKNFHSDVAGRSFHNGRFIQKMREKAATLPNVRLEQGTVTSLIEENGSIKGVQYKTKAGQELKAHAPLTVVCDGCFSNLRRSLCDPKVDVPSCFVGLVLELENDRLPYPNHGHVILADPSPILFYPISSTEIRCLVDVPGQKLPSLANGDMANYLKTMVAPQVPPELRDAFLSAIDKGHIKTMPNRSMPAAPYPTPGALLLGDSFNMRHPLTGGGMTVALSDIAVLRNLLMPLQDLNDADELCKYLESFYTLRKPVASTINTLAGALYKVFCASPDQARREMRDACFDYLSLGGTCSTGPVALLSGLDPNPMSLVLHFFAVAVYGVGRLLVPFPSPKKLWIGAKLILSASGIIFPIIKAEGIRQMFFPTTIPAYHRAPPVKTESD*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100741" stop="100950"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AYYTKRNFKCTYSFKSSQTPYSVEMYIVAFTLYLREFNLYVSCSSEIDINGYVSVLYITLMYVSVCYKGL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="103936" PGL_stop="102117"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="103936" e_stop="103591"/>
            <exon e_start="103487" e_stop="103327"/>
            <exon e_start="103230" e_stop="102117"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.964" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="103936" e_stop="103591" e_length="346"/>
          </exon>
          <intron i_serial="1" don_prob="0.964" acc_prob="0.998">
            <gDNA_intron_boundary i_start="103590" i_stop="103488" i_length="103"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="103487" e_stop="103327" e_length="161"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="103326" i_stop="103231" i_length="96"/>
          </intron>
          <exon e_serial="3" e_score="0.999">
            <gDNA_exon_boundary e_start="103230" e_stop="102117" e_length="1114"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="103936" stop="103591"/>
              <exon start="103487" stop="103327"/>
              <exon start="103230" stop="102117"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565890" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACATAGCAACAATCTTCTCTAAATATTTTCTGCCTCTCAAAACAAACATAAAAAAATTCAAGTGCAAATGAAGCTTTTATCGAAGAAAGCCATGTGTAACTCACATGGACAAGATTCTTCCTACTTTCTAGGATGGGAAGAGTATCAGAAAAACCCATATGATGAAATTCGTAATCCTAAAGGAATCATTCAGATGGGTCTCGCAGAGAATCAGCTCTCTTTCGATTTATTAGAGTCATGGCTTACTCTAAATCCAGATGCATCTGCATTTAAGAGAAATGGCCACTCAATATTTAGAGAGCTTTCCTTATTTCAAGATTACCATGGTCTTCCAGCTTTCAAAGAT : GCATTGGTTCAATTCATGTCTGAAATCAGAGGAAACAAAGTAAGCTTTGATTCAAATAAGCTTGTACTTACAGCTGGTGCTACTTCTGCAAATGAGACACTCATGTTTTGCCTCGCTGATCCTGGCCATGCTTTTCTCCTTCCCACTCCATACTACCCTGG : ATTTGATAGAGACTTAAAATGGAGAACAGGAGCTGAGATTGTTCCAATACAATGCACAAGTTCAAACGGATTTAGAATCACAGAATCAGCTCTTGAAGAAGCTTATACAGAAGCCGAAAGGCGAAACCTTAGAGTGAAAGGGGTTTTAGTCACTAACCCTTCGAATCCATTAGGCACAACATTAACCAAAAAAGAACTCCAACTTCTTCTTACCTTCGTATCTACAAAACAAATCCATCTCATCAGTGATGAGATATATTCTGGCACTGTTTTTAACTCACCTAAATTCGTCAGTGTCATGGAAGTACTAATCGAAAACAACTACATGTACACTGATGTATGGGATAGAGTTCACATAGTCTATAGTCTTTCGAAAGATTTGGGACTTCCAGGATTTCGAGTTGGTGCCATTTATTCCAACGACGATAGGGTCGTCTCTGCAGCCACAAAAATGTCTAGTTTTGGATTAATTTCATCTCAAACTCAATACCTTCTTTCTGCTTTGCTATCAGACAAAAAGTTCACGAAAAATTACGTGTCTGAAAATCAAAAGAGGCTGAAAAAACGACATGAAATGCTAGTTGGTGGTCTTAAACAAATTGGAATAAGGTGCCTTGAGAGCAATGCTGGGTTGTTTTGTTGGGTGGATATGAGACATCTTTTAAGTTCAAACACATTTGATGGAGAAATGGAATTATGGAAGAAAATAGTGTACGAAGTAGGGCTAAATATTTCAGCTGGATCGTCATGCCATTGTACAGAACCGGGTTGGTTTCGTGCATGTTTTGCTAACATGTCAGAAGATACGTTAAATATCGCCATACAACGTTTGAAGGCTTTTGTTGATTCAAGGGTTAATAACAAGGATGATATTCAAAATCAGCAGCAGTGTTCTAATAAGAAGAAGTCATTTTCCAAATGGGTTTTTCGACTATCGTTCAATGAACGTCAAAGAGAACGATAGTCTAGTCATGTGAAAGTTCGTAAATTCATTTTTGTTTTTTTAAATCTCGATAGTTAATTAGATGTTGAGATTTCTAAAAGATTTTGTACCATAATACATACTTTTAAATTGTTTTAATTGTAGAGGGTCACTGTCCATTTGATTGGACGA</gDNA_template>
            <first_frame> T  *  Q  Q  S  S  L  N  I  F  C  L  S  K  Q  T  *  K  N  S  S  A  N  E  A  F  I  E  E  S  H  V  *  L  T  W  T  R  F  F  L  L  S  R  M  G  R  V  S  E  K  P  I  *  *  N  S  *  S  *  R  N  H  S  D  G  S  R  R  E  S  A  L  F  R  F  I  R  V  M  A  Y  S  K  S  R  C  I  C  I  *  E  K  W  P  L  N  I  *  R  A  F  L  I  S  R  L  P  W  S  S  S  F  Q  R   : C  I  G  S  I  H  V  *  N  Q  R  K  Q  S  K  L  *  F  K  *  A  C  T  Y  S  W  C  Y  F  C  K  *  D  T  H  V  L  P  R  *  S  W  P  C  F  S  P  S  H  S  I  L  P  W  :  I  *  *  R  L  K  M  E  N  R  S  *  D  C  S  N  T  M  H  K  F  K  R  I  *  N  H  R  I  S  S  *  R  S  L  Y  R  S  R  K  A  K  P  *  S  E  R  G  F  S  H  *  P  F  E  S  I  R  H  N  I  N  Q  K  R  T  P  T  S  S  Y  L  R  I  Y  K  T  N  P  S  H  Q  *  *  D  I  F  W  H  C  F  *  L  T  *  I  R  Q  C  H  G  S  T  N  R  K  Q  L  H  V  H  *  C  M  G  *  S  S  H  S  L  *  S  F  E  R  F  G  T  S  R  I  S  S  W  C  H  L  F  Q  R  R  *  G  R  L  C  S  H  K  N  V  *  F  W  I  N  F  I  S  N  S  I  P  S  F  C  F  A  I  R  Q  K  V  H  E  K  L  R  V  *  K  S  K  E  A  E  K  T  T  *  N  A  S  W  W  S  *  T  N  W  N  K  V  P  *  E  Q  C  W  V  V  L  L  G  G  Y  E  T  S  F  K  F  K  H  I  *  W  R  N  G  I  M  E  E  N  S  V  R  S  R  A  K  Y  F  S  W  I  V  M  P  L  Y  R  T  G  L  V  S  C  M  F  C  *  H  V  R  R  Y  V  K  Y  R  H  T  T  F  E  G  F  C  *  F  K  G  *  *  Q  G  *  Y  S  K  S  A  A  V  F  *  *  E  E  V  I  F  Q  M  G  F  S  T  I  V  Q  *  T  S  K  R  T  I  V  *  S  C  E  S  S  *  I  H  F  C  F  F  K  S  R  *  L  I  R  C  *  D  F  *  K  I  L  Y  H  N  T  Y  F  *  I  V  L  I  V  E  G  H  C  P  F  D  W  T  </first_frame>
            <second_frame>  H  S  N  N  L  L  *  I  F  S  A  S  Q  N  K  H  K  K  I  Q  V  Q  M  K  L  L  S  K  K  A  M  C  N  S  H  G  Q  D  S  S  Y  F  L  G  W  E  E  Y  Q  K  N  P  Y  D  E  I  R  N  P  K  G  I  I  Q  M  G  L  A  E  N  Q  L  S  F  D  L  L  E  S  W  L  T  L  N  P  D  A  S  A  F  K  R  N  G  H  S  I  F  R  E  L  S  L  F  Q  D  Y  H  G  L  P  A  F  K  D  :  A  L  V  Q  F  M  S  E  I  R  G  N  K  V  S  F  D  S  N  K  L  V  L  T  A  G  A  T  S  A  N  E  T  L  M  F  C  L  A  D  P  G  H  A  F  L  L  P  T  P  Y  Y  P  G :   F  D  R  D  L  K  W  R  T  G  A  E  I  V  P  I  Q  C  T  S  S  N  G  F  R  I  T  E  S  A  L  E  E  A  Y  T  E  A  E  R  R  N  L  R  V  K  G  V  L  V  T  N  P  S  N  P  L  G  T  T  L  T  K  K  E  L  Q  L  L  L  T  F  V  S  T  K  Q  I  H  L  I  S  D  E  I  Y  S  G  T  V  F  N  S  P  K  F  V  S  V  M  E  V  L  I  E  N  N  Y  M  Y  T  D  V  W  D  R  V  H  I  V  Y  S  L  S  K  D  L  G  L  P  G  F  R  V  G  A  I  Y  S  N  D  D  R  V  V  S  A  A  T  K  M  S  S  F  G  L  I  S  S  Q  T  Q  Y  L  L  S  A  L  L  S  D  K  K  F  T  K  N  Y  V  S  E  N  Q  K  R  L  K  K  R  H  E  M  L  V  G  G  L  K  Q  I  G  I  R  C  L  E  S  N  A  G  L  F  C  W  V  D  M  R  H  L  L  S  S  N  T  F  D  G  E  M  E  L  W  K  K  I  V  Y  E  V  G  L  N  I  S  A  G  S  S  C  H  C  T  E  P  G  W  F  R  A  C  F  A  N  M  S  E  D  T  L  N  I  A  I  Q  R  L  K  A  F  V  D  S  R  V  N  N  K  D  D  I  Q  N  Q  Q  Q  C  S  N  K  K  K  S  F  S  K  W  V  F  R  L  S  F  N  E  R  Q  R  E  R  *  S  S  H  V  K  V  R  K  F  I  F  V  F  L  N  L  D  S  *  L  D  V  E  I  S  K  R  F  C  T  I  I  H  T  F  K  L  F  *  L  *  R  V  T  V  H  L  I  G  R </second_frame>
            <third_frame>   I  A  T  I  F  S  K  Y  F  L  P  L  K  T  N  I  K  K  F  K  C  K  *  S  F  Y  R  R  K  P  C  V  T  H  M  D  K  I  L  P  T  F  *  D  G  K  S  I  R  K  T  H  M  M  K  F  V  I  L  K  E  S  F  R  W  V  S  Q  R  I  S  S  L  S  I  Y  *  S  H  G  L  L  *  I  Q  M  H  L  H  L  R  E  M  A  T  Q  Y  L  E  S  F  P  Y  F  K  I  T  M  V  F  Q  L  S  K  M :   H  W  F  N  S  C  L  K  S  E  E  T  K  *  A  L  I  Q  I  S  L  Y  L  Q  L  V  L  L  L  Q  M  R  H  S  C  F  A  S  L  I  L  A  M  L  F  S  F  P  L  H  T  T  L   : D  L  I  E  T  *  N  G  E  Q  E  L  R  L  F  Q  Y  N  A  Q  V  Q  T  D  L  E  S  Q  N  Q  L  L  K  K  L  I  Q  K  P  K  G  E  T  L  E  *  K  G  F  *  S  L  T  L  R  I  H  *  A  Q  H  *  P  K  K  N  S  N  F  F  L  P  S  Y  L  Q  N  K  S  I  S  S  V  M  R  Y  I  L  A  L  F  L  T  H  L  N  S  S  V  S  W  K  Y  *  S  K  T  T  T  C  T  L  M  Y  G  I  E  F  T  *  S  I  V  F  R  K  I  W  D  F  Q  D  F  E  L  V  P  F  I  P  T  T  I  G  S  S  L  Q  P  Q  K  C  L  V  L  D  *  F  H  L  K  L  N  T  F  F  L  L  C  Y  Q  T  K  S  S  R  K  I  T  C  L  K  I  K  R  G  *  K  N  D  M  K  C  *  L  V  V  L  N  K  L  E  *  G  A  L  R  A  M  L  G  C  F  V  G  W  I  *  D  I  F  *  V  Q  T  H  L  M  E  K  W  N  Y  G  R  K  *  C  T  K  *  G  *  I  F  Q  L  D  R  H  A  I  V  Q  N  R  V  G  F  V  H  V  L  L  T  C  Q  K  I  R  *  I  S  P  Y  N  V  *  R  L  L  L  I  Q  G  L  I  T  R  M  I  F  K  I  S  S  S  V  L  I  R  R  S  H  F  P  N  G  F  F  D  Y  R  S  M  N  V  K  E  N  D  S  L  V  M  *  K  F  V  N  S  F  L  F  F  *  I  S  I  V  N  *  M  L  R  F  L  K  D  F  V  P  *  Y  I  L  L  N  C  F  N  C  R  G  S  L  S  I  *  L  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="103914" stop="103591"/>
                    <exon start="103487" stop="103327"/>
                    <exon start="103230" stop="102267"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1446</number_coding_nucleotides>
                  <number_encoded_amino_acids>482</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSASQNKHKKIQVQMKLLSKKAMCNSHGQDSSYFLGWEEYQKNPYDEIRNPKGIIQMGLAENQLSFDLLESWLTLNPDASAFKRNGHSIFRELSLFQDYHGLPAFKDALVQFMSEIRGNKVSFDSNKLVLTAGATSANETLMFCLADPGHAFLLPTPYYPGFDRDLKWRTGAEIVPIQCTSSNGFRITESALEEAYTEAERRNLRVKGVLVTNPSNPLGTTLTKKELQLLLTFVSTKQIHLISDEIYSGTVFNSPKFVSVMEVLIENNYMYTDVWDRVHIVYSLSKDLGLPGFRVGAIYSNDDRVVSAATKMSSFGLISSQTQYLLSALLSDKKFTKNYVSENQKRLKKRHEMLVGGLKQIGIRCLESNAGLFCWVDMRHLLSSNTFDGEMELWKKIVYEVGLNISAGSSCHCTEPGWFRACFANMSEDTLNIAIQRLKAFVDSRVNNKDDIQNQQQCSNKKKSFSKWVFRLSFNERQRER*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="110257" PGL_stop="111949"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="110257" e_stop="110602"/>
            <exon e_start="110706" e_stop="110866"/>
            <exon e_start="110963" e_stop="111949"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.964" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="110257" e_stop="110602" e_length="346"/>
          </exon>
          <intron i_serial="1" don_prob="0.964" acc_prob="0.998">
            <gDNA_intron_boundary i_start="110603" i_stop="110705" i_length="103"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="110706" e_stop="110866" e_length="161"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="110867" i_stop="110962" i_length="96"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="110963" e_stop="111949" e_length="987"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110257" stop="110602"/>
              <exon start="110706" stop="110866"/>
              <exon start="110963" stop="111949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565890" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACATAGCAACAATCTTCTCTAAATATTTTCTGCCTCTCAAAACAAACATAAAAAAATTCAAGTGCAAATGAAGCTTTTATCGAAGAAAGCCATGTGTAACTCACATGGACAAGATTCTTCCTACTTTCTAGGATGGGAAGAGTATCAGAAAAACCCATATGATGAAATTCGTAATCCTAAAGGAATCATTCAGATGGGTCTCGCAGAGAATCAGCTCTCTTTCGATTTATTAGAGTCATGGCTTACTCTAAATCCAGATGCATCTGCATTTAAGAGAAATGGCCACTCAATATTTAGAGAGCTTTCCTTATTTCAAGATTACCATGGTCTTCCAGCTTTCAAAGAT : GCATTGGTTCAATTCATGTCTGAAATCAGAGGAAACAAAGTAAGCTTTGATTCAAATAAGCTTGTACTTACAGCTGGTGCTACTTCTGCAAATGAGACACTCATGTTTTGCCTCGCTGATCCTGGCCATGCTTTTCTCCTTCCCACTCCATACTACCCTGG : ATTTGATAGAGACTTAAAATGGAGAACAGGAGCTGAGATTGTTCCAATACAATGCACAAGTTCAAACGGATTTAGAATCACAGAATCAGCTCTTGAAGAAGCTTATACAGAAGCCGAAAGGCGAAACCTTAGAGTGAAAGGGGTTTTAGTCACTAACCCTTCGAATCCATTAGGCACAACATTAACCAAAAAAGAACTCCAACTTCTTCTTACCTTCGTATCTACAAAACAAATCCATCTCATCAGTGATGAGATATATTCTGGCACTGTTTTTAACTCACCTAAATTCGTCAGTGTCATGGAAGTACTAATCGAAAACAACTACATGTACACTGATGTATGGGATAGAGTTCACATAGTCTATAGTCTTTCGAAAGATTTGGGACTTCCAGGATTTCGAGTTGGTGCCATTTATTCCAACGACGATAGGGTCGTCTCTGCAGCCACAAAAATGTCTAGTTTTGGATTAATTTCATCTCAAACTCAATACCTTCTTTCTGCTTTGCTATCAGACAAAAAGTTCACGAAAAATTACGTGTCTGAAAATCAAAAGAGGCTGAAAAAACGACATGAAATGCTAGTTGGTGGTCTTAAACAAATTGGAATAAGGTGCCTTGAGAGCAATGCTGGGTTGTTTTGTTGGGTGGATATGAGACATCTTTTAAGTTCAAACACATTTGATGGAGAAATGGAATTATGGAAGAAAATAGTGTACGAAGTAGGGCTAAATATTTCAGCTGGATCGTCATGCCATTGTACAGAACCGGGTTGGTTTCGTGCATGTTTTGCTAACATGTCAGAAGATACGTTAAATATCGCCATACAACGTTTGAAGGCTTTTGTTGATTCAAGGGTTAATAACAAGGATGATATTCAAAATCAGCAGCAGTGTTCTAATAAGAAGAAGTCATTTTCCAAATGGGTTTTTCGACTATCGTTCAATGAACGTCAAAGAGAACGATAGTCTAGACATACGAAAGTTACTAA</gDNA_template>
            <first_frame> T  *  Q  Q  S  S  L  N  I  F  C  L  S  K  Q  T  *  K  N  S  S  A  N  E  A  F  I  E  E  S  H  V  *  L  T  W  T  R  F  F  L  L  S  R  M  G  R  V  S  E  K  P  I  *  *  N  S  *  S  *  R  N  H  S  D  G  S  R  R  E  S  A  L  F  R  F  I  R  V  M  A  Y  S  K  S  R  C  I  C  I  *  E  K  W  P  L  N  I  *  R  A  F  L  I  S  R  L  P  W  S  S  S  F  Q  R   : C  I  G  S  I  H  V  *  N  Q  R  K  Q  S  K  L  *  F  K  *  A  C  T  Y  S  W  C  Y  F  C  K  *  D  T  H  V  L  P  R  *  S  W  P  C  F  S  P  S  H  S  I  L  P  W  :  I  *  *  R  L  K  M  E  N  R  S  *  D  C  S  N  T  M  H  K  F  K  R  I  *  N  H  R  I  S  S  *  R  S  L  Y  R  S  R  K  A  K  P  *  S  E  R  G  F  S  H  *  P  F  E  S  I  R  H  N  I  N  Q  K  R  T  P  T  S  S  Y  L  R  I  Y  K  T  N  P  S  H  Q  *  *  D  I  F  W  H  C  F  *  L  T  *  I  R  Q  C  H  G  S  T  N  R  K  Q  L  H  V  H  *  C  M  G  *  S  S  H  S  L  *  S  F  E  R  F  G  T  S  R  I  S  S  W  C  H  L  F  Q  R  R  *  G  R  L  C  S  H  K  N  V  *  F  W  I  N  F  I  S  N  S  I  P  S  F  C  F  A  I  R  Q  K  V  H  E  K  L  R  V  *  K  S  K  E  A  E  K  T  T  *  N  A  S  W  W  S  *  T  N  W  N  K  V  P  *  E  Q  C  W  V  V  L  L  G  G  Y  E  T  S  F  K  F  K  H  I  *  W  R  N  G  I  M  E  E  N  S  V  R  S  R  A  K  Y  F  S  W  I  V  M  P  L  Y  R  T  G  L  V  S  C  M  F  C  *  H  V  R  R  Y  V  K  Y  R  H  T  T  F  E  G  F  C  *  F  K  G  *  *  Q  G  *  Y  S  K  S  A  A  V  F  *  *  E  E  V  I  F  Q  M  G  F  S  T  I  V  Q  *  T  S  K  R  T  I  V  *  T  Y  E  S  Y  * </first_frame>
            <second_frame>  H  S  N  N  L  L  *  I  F  S  A  S  Q  N  K  H  K  K  I  Q  V  Q  M  K  L  L  S  K  K  A  M  C  N  S  H  G  Q  D  S  S  Y  F  L  G  W  E  E  Y  Q  K  N  P  Y  D  E  I  R  N  P  K  G  I  I  Q  M  G  L  A  E  N  Q  L  S  F  D  L  L  E  S  W  L  T  L  N  P  D  A  S  A  F  K  R  N  G  H  S  I  F  R  E  L  S  L  F  Q  D  Y  H  G  L  P  A  F  K  D  :  A  L  V  Q  F  M  S  E  I  R  G  N  K  V  S  F  D  S  N  K  L  V  L  T  A  G  A  T  S  A  N  E  T  L  M  F  C  L  A  D  P  G  H  A  F  L  L  P  T  P  Y  Y  P  G :   F  D  R  D  L  K  W  R  T  G  A  E  I  V  P  I  Q  C  T  S  S  N  G  F  R  I  T  E  S  A  L  E  E  A  Y  T  E  A  E  R  R  N  L  R  V  K  G  V  L  V  T  N  P  S  N  P  L  G  T  T  L  T  K  K  E  L  Q  L  L  L  T  F  V  S  T  K  Q  I  H  L  I  S  D  E  I  Y  S  G  T  V  F  N  S  P  K  F  V  S  V  M  E  V  L  I  E  N  N  Y  M  Y  T  D  V  W  D  R  V  H  I  V  Y  S  L  S  K  D  L  G  L  P  G  F  R  V  G  A  I  Y  S  N  D  D  R  V  V  S  A  A  T  K  M  S  S  F  G  L  I  S  S  Q  T  Q  Y  L  L  S  A  L  L  S  D  K  K  F  T  K  N  Y  V  S  E  N  Q  K  R  L  K  K  R  H  E  M  L  V  G  G  L  K  Q  I  G  I  R  C  L  E  S  N  A  G  L  F  C  W  V  D  M  R  H  L  L  S  S  N  T  F  D  G  E  M  E  L  W  K  K  I  V  Y  E  V  G  L  N  I  S  A  G  S  S  C  H  C  T  E  P  G  W  F  R  A  C  F  A  N  M  S  E  D  T  L  N  I  A  I  Q  R  L  K  A  F  V  D  S  R  V  N  N  K  D  D  I  Q  N  Q  Q  Q  C  S  N  K  K  K  S  F  S  K  W  V  F  R  L  S  F  N  E  R  Q  R  E  R  *  S  R  H  T  K  V  T   </second_frame>
            <third_frame>   I  A  T  I  F  S  K  Y  F  L  P  L  K  T  N  I  K  K  F  K  C  K  *  S  F  Y  R  R  K  P  C  V  T  H  M  D  K  I  L  P  T  F  *  D  G  K  S  I  R  K  T  H  M  M  K  F  V  I  L  K  E  S  F  R  W  V  S  Q  R  I  S  S  L  S  I  Y  *  S  H  G  L  L  *  I  Q  M  H  L  H  L  R  E  M  A  T  Q  Y  L  E  S  F  P  Y  F  K  I  T  M  V  F  Q  L  S  K  M :   H  W  F  N  S  C  L  K  S  E  E  T  K  *  A  L  I  Q  I  S  L  Y  L  Q  L  V  L  L  L  Q  M  R  H  S  C  F  A  S  L  I  L  A  M  L  F  S  F  P  L  H  T  T  L   : D  L  I  E  T  *  N  G  E  Q  E  L  R  L  F  Q  Y  N  A  Q  V  Q  T  D  L  E  S  Q  N  Q  L  L  K  K  L  I  Q  K  P  K  G  E  T  L  E  *  K  G  F  *  S  L  T  L  R  I  H  *  A  Q  H  *  P  K  K  N  S  N  F  F  L  P  S  Y  L  Q  N  K  S  I  S  S  V  M  R  Y  I  L  A  L  F  L  T  H  L  N  S  S  V  S  W  K  Y  *  S  K  T  T  T  C  T  L  M  Y  G  I  E  F  T  *  S  I  V  F  R  K  I  W  D  F  Q  D  F  E  L  V  P  F  I  P  T  T  I  G  S  S  L  Q  P  Q  K  C  L  V  L  D  *  F  H  L  K  L  N  T  F  F  L  L  C  Y  Q  T  K  S  S  R  K  I  T  C  L  K  I  K  R  G  *  K  N  D  M  K  C  *  L  V  V  L  N  K  L  E  *  G  A  L  R  A  M  L  G  C  F  V  G  W  I  *  D  I  F  *  V  Q  T  H  L  M  E  K  W  N  Y  G  R  K  *  C  T  K  *  G  *  I  F  Q  L  D  R  H  A  I  V  Q  N  R  V  G  F  V  H  V  L  L  T  C  Q  K  I  R  *  I  S  P  Y  N  V  *  R  L  L  L  I  Q  G  L  I  T  R  M  I  F  K  I  S  S  S  V  L  I  R  R  S  H  F  P  N  G  F  F  D  Y  R  S  M  N  V  K  E  N  D  S  L  D  I  R  K  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0284G15.1" strand="+"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="110279" stop="110602"/>
                    <exon start="110706" stop="110866"/>
                    <exon start="110963" stop="111926"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1446</number_coding_nucleotides>
                  <number_encoded_amino_acids>482</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFSASQNKHKKIQVQMKLLSKKAMCNSHGQDSSYFLGWEEYQKNPYDEIRNPKGIIQMGLAENQLSFDLLESWLTLNPDASAFKRNGHSIFRELSLFQDYHGLPAFKDALVQFMSEIRGNKVSFDSNKLVLTAGATSANETLMFCLADPGHAFLLPTPYYPGFDRDLKWRTGAEIVPIQCTSSNGFRITESALEEAYTEAERRNLRVKGVLVTNPSNPLGTTLTKKELQLLLTFVSTKQIHLISDEIYSGTVFNSPKFVSVMEVLIENNYMYTDVWDRVHIVYSLSKDLGLPGFRVGAIYSNDDRVVSAATKMSSFGLISSQTQYLLSALLSDKKFTKNYVSENQKRLKKRHEMLVGGLKQIGIRCLESNAGLFCWVDMRHLLSSNTFDGEMELWKKIVYEVGLNISAGSSCHCTEPGWFRACFANMSEDTLNIAIQRLKAFVDSRVNNKDDIQNQQQCSNKKKSFSKWVFRLSFNERQRER*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="124977" PGL_stop="125323"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="124977" e_stop="125323"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="124977" e_stop="125323" e_length="347"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="124977" stop="125323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576971" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACATAGATTACCAAAAATAAATATATTTCTTAACAATTTACATAGCTGCACTGCGACAAATTAAAGAAACAAATGAGTAAATAGAATATTGATTAATGATTAGGAAATCTCTAATTAACAAATGAACTATACAAGTCATTTCATTATAGTACAAATTAAAAAAAATAAAAATCTTAATAAGTTTTGGGAGATTTCCTAAGAATCTAGTTAATCAACAAGACATTAATTAAAAATAAATTCAACAAGACGATTTGCATACTGTACTAATTAATTAACAAGCTGCTGAGGGATTAGTAAAGGAGCCGTATAGGTGAGGAGGCTTGGCTGAGTTTTGGGCAGCGCCGGC</gDNA_template>
            <first_frame> N  I  D  Y  Q  K  *  I  Y  F  L  T  I  Y  I  A  A  L  R  Q  I  K  E  T  N  E  *  I  E  Y  *  L  M  I  R  K  S  L  I  N  K  *  T  I  Q  V  I  S  L  *  Y  K  L  K  K  I  K  I  L  I  S  F  G  R  F  P  K  N  L  V  N  Q  Q  D  I  N  *  K  *  I  Q  Q  D  D  L  H  T  V  L  I  N  *  Q  A  A  E  G  L  V  K  E  P  Y  R  *  G  G  L  A  E  F  W  A  A  P   </first_frame>
            <second_frame>  T  *  I  T  K  N  K  Y  I  S  *  Q  F  T  *  L  H  C  D  K  L  K  K  Q  M  S  K  *  N  I  D  *  *  L  G  N  L  *  L  T  N  E  L  Y  K  S  F  H  Y  S  T  N  *  K  K  *  K  S  *  *  V  L  G  D  F  L  R  I  *  L  I  N  K  T  L  I  K  N  K  F  N  K  T  I  C  I  L  Y  *  L  I  N  K  L  L  R  D  *  *  R  S  R  I  G  E  E  A  W  L  S  F  G  Q  R  R  </second_frame>
            <third_frame>   H  R  L  P  K  I  N  I  F  L  N  N  L  H  S  C  T  A  T  N  *  R  N  K  *  V  N  R  I  L  I  N  D  *  E  I  S  N  *  Q  M  N  Y  T  S  H  F  I  I  V  Q  I  K  K  N  K  N  L  N  K  F  W  E  I  S  *  E  S  S  *  S  T  R  H  *  L  K  I  N  S  T  R  R  F  A  Y  C  T  N  *  L  T  S  C  *  G  I  S  K  G  A  V  *  V  R  R  L  G  *  V  L  G  S  A  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0284G15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 95 chains have been computed
$ 
$ memory statistics:
$ 127848 bytes spliced alignments in total
$ 29 spliced alignments have been stored
$ 4408 bytes was the average size of a spliced alignment
$ 27992 bytes predicted gene locations in total
$ 19 predicted gene locations have been stored
$ 1473 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 108 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:31:05
-->
