<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:30:26"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566464" ref_strand="+" ref_description="SGN-U566464 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157360429|emb|CAO69652.1| (e_value=1e-85) unnamed; (*ATH) AT1G11915.1 (e_value=3e-77) | Symbol: None | expressed protein | chr1:4021823-4023290 FORWARD | Aliases: None; ">
      <seq>aaaagtgaaaggtattataaagcaaattccaacagcaaagattctccataaacactttcctaatgctacagttttccttaactatacaaaatcttggtagagaaaatcttcaagcaaatctcacatggccatttcaaatttgtccatctttattattttccttgtacttcaatttctatgcataacagaagctcaatcaagcatttgtagaaattcgtgtggcgatatcccaattcagtatccttttggcattgatgatggctgtggaagtccattttatcgacacattcttgtatgcactggtggacagcttcaactcagaaccccttctggtagatatcctgttagaaatttaagttatatggatccacatattcttgtgaccgatcccttaatgtggaattgtctagatggtgacaattgtcgacctaccaggcccgttagcctagatactagcacacatttcactttgtcctctgaaaatgactacttgttctttaattgtagtgaaagtgatgtgttagttgagccaaaaccaatgttctgcgagcgtttccctgatcagtgtgattcaacttgtgatagttcgagttatctttgtaggcacatgcctgaatgtcctactgctttgaggagtagctcttgttgttcttactatcccaaagctactgaatctttgaggctgatgttgaagcattgtgcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="5754" stop="7057"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6054" g_stop="6757" g_length="704"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="705" r_length="705" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-U566464" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>704</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U566464" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6054" e_stop="6757"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGTGAAAGGTA-TATAAAGCAAAAACCAACAGCAAAGATTCTCCATAAACACTTTCCCAATGCTACAGTTTTCCTTAACTATACAAAATCTTGGTAGAGAAAATCTTCAAGCAAATCTCACATGGCCATTTCAAATTTGTCCATCTTTATTATTTTCCTTGTACTTCAATTTCTATGCATAACAGAAGCTCAATCAAGCATTTGTAGAAATTCTTGTGGCGATATCCCAATTCAGTATCCTTTTGGCATTGATGATGGCTGTGGAAGTCCATTTTATCGACACATTCTTGTATGCACTGGTGGTCAGCTTCAACTCAGAACCCCTTCTGGTAGATATCCTGTTAGAAATTTGAGTTATATGGATCCACATATTCTTGTGACCGATCCCTTAATGTGGAATTGTCTAGATGGTGACAATTTTCGACCTACCAGGCCGTTTAGCCTAGATACTAGCACACATTTCACTTTGTCCTCTGAAAATGACTACTTGTTCTTTAATTGTAGTGAAAGTGATGTGTTAGTTGAGCCAAAACCAATGTTCTGCGAGCGTTTCCCTGATCAGTGTGATTCAACTTGTGATAGTTCGAGTTATCTTTGTAGGCACATGCCTGAATGTCCTACTGCTTTGAGGAGTAGCTCTTGTTGTTCTTACTATCCCAAAGCTACTGAATCTTTGAGGCTGATGTTGAAGCATTGTGCAAG</genome_strand>
        <mrna_strand>AAAAGTGAAAGGTATTATAAAGCAAATTCCAACAGCAAAGATTCTCCATAAACACTTTCCTAATGCTACAGTTTTCCTTAACTATACAAAATCTTGGTAGAGAAAATCTTCAAGCAAATCTCACATGGCCATTTCAAATTTGTCCATCTTTATTATTTTCCTTGTACTTCAATTTCTATGCATAACAGAAGCTCAATCAAGCATTTGTAGAAATTCGTGTGGCGATATCCCAATTCAGTATCCTTTTGGCATTGATGATGGCTGTGGAAGTCCATTTTATCGACACATTCTTGTATGCACTGGTGGACAGCTTCAACTCAGAACCCCTTCTGGTAGATATCCTGTTAGAAATTTAAGTTATATGGATCCACATATTCTTGTGACCGATCCCTTAATGTGGAATTGTCTAGATGGTGACAATTGTCGACCTACCAGGCCCGTTAGCCTAGATACTAGCACACATTTCACTTTGTCCTCTGAAAATGACTACTTGTTCTTTAATTGTAGTGAAAGTGATGTGTTAGTTGAGCCAAAACCAATGTTCTGCGAGCGTTTCCCTGATCAGTGTGATTCAACTTGTGATAGTTCGAGTTATCTTTGTAGGCACATGCCTGAATGTCCTACTGCTTTGAGGAGTAGCTCTTGTTGTTCTTACTATCCCAAAGCTACTGAATCTTTGAGGCTGATGTTGAAGCATTGTGCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582348" ref_strand="+" ref_description="SGN-U582348 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|147789060|emb|CAN60346.1| (e_value=1e-21) hypothetical; (*ATH) AT4G22080.1 (e_value=1e-20) | Symbol: None | pectate lyase family protein, similar to pectate lyase 2 GP:6606534 from (Musa acuminata) | chr4:11700630-11702678 REVERSE | Aliases: F1N20.180, F1N20_180; (*SWP) sp|O65456|PEL16_ARATH (e_value=1e-19) Putative pectate lyase 16 OS=Arabidopsis thaliana GN=At4g22080; ">
      <seq>gaaggaaattatttcattgctcctgacaaagcttacaacaaagaggtatactaacatcaaactacctgttctcaaattggaaatcacaaaaaaaaacaacttatactaatgtcatcgccatcgttatgttacaggttaccaagagggagactgaagaaaaaggatggaagagttggaaatggagatcctccaatgatatgtttatgaatggagcttattttcttccatctggatatggaagtattgctccaaaatacacgagaggacaatcgttcattgttgctcacggagcatttactccctctttaacttccaatgctggtcctcttcaatgtgttgtcaatgaaccttgctaaatgctgatacaaaatttccttctttccttttcctatcatcagcatgccctgttatcttcgacaggattttttaatgtcttgacatgtctaatttatacttcgcgaatacatagttagcttgaaagattcaggctctaggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="8655" stop="7559"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8355" g_stop="7859" g_length="497"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="497" r_length="497" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-U582348" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>497</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U582348" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8355" e_stop="7859"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGGAAATTATTTCATTGCTCCTGACAAAGCTTACAACAAAGAGGTATACTAACATCAAACTACCTGTTCTCAAATTGGAAATCACAAAAAAAAACAACTTATACTAATGTCATCGCCATCGTTATGTTACAGGTTACCAAGAGGGAGACTGAAGAAAAAGGATGGAAGAGTTGGAAATGGAGATCCTCCAATGATATGTTTATGAATGGAGCTTATTTTCTTCCATCTGGATATGGAAGTATTGCTCCAAAATACACGAGAGGACAATCGTTCATTGTTGCTCACGGAGCATTTACTCCCTCTTTAACTTCCAATGCTGGTCCTCTTCAATGTGTTGTCAATGAACCTTGCTAAATGCTGATACAAAATTTCCTTCTTTCCTTTTCCTATCATCAGCATGCCCTGTTATCTTCGACAGGATTTTTTAATGTCTTGACATGTCTAATTTATACTTCGCGAATACATAGTTAGCTTGAAAGATTCAGGCTTTAGGAG</genome_strand>
        <mrna_strand>GAAGGAAATTATTTCATTGCTCCTGACAAAGCTTACAACAAAGAGGTATACTAACATCAAACTACCTGTTCTCAAATTGGAAATCACAAAAAAAAACAACTTATACTAATGTCATCGCCATCGTTATGTTACAGGTTACCAAGAGGGAGACTGAAGAAAAAGGATGGAAGAGTTGGAAATGGAGATCCTCCAATGATATGTTTATGAATGGAGCTTATTTTCTTCCATCTGGATATGGAAGTATTGCTCCAAAATACACGAGAGGACAATCGTTCATTGTTGCTCACGGAGCATTTACTCCCTCTTTAACTTCCAATGCTGGTCCTCTTCAATGTGTTGTCAATGAACCTTGCTAAATGCTGATACAAAATTTCCTTCTTTCCTTTTCCTATCATCAGCATGCCCTGTTATCTTCGACAGGATTTTTTAATGTCTTGACATGTCTAATTTATACTTCGCGAATACATAGTTAGCTTGAAAGATTCAGGCTCTAGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U585954" ref_strand="+" ref_description="SGN-U585954 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|147779974|emb|CAN75532.1| (e_value=2e-33) hypothetical; (*ATH) AT1G11925.1 (e_value=2e-31) | Symbol: None | stigma-specific Stig1 family protein, contains Pfam profile PF04885: Stigma-specific protein, Stig1 | chr1:4026165-4026585 REVERSE | Aliases: None; ">
      <seq>cgggccggggatccaaacatttaatttctctcaatatttcatctcataatatcacaagtattagccatgaatagcttgaaaattttctttttgctagccattataatggcctcattcactatactttcagtagcgtcatcagctaatgaattaaaagaaaaaatgccggtaaaaaataagaatatggttgaatcatttgaagttcctttgaatgaaactgaaaaaagttcatcatctattcaacggtttctaggacataaatcaccttattattacaagtctaaaatcatacaaaaacgtatgagtacatgtaacaagaaccctagaatatgtcgtgctaaaggtagcccagggccattttgctgcaagaagaagtgtgtaaacgtgtttgtagacaggcaaaactgtggatattgtgggaagaaatgcaggtataatgagacttgttgcaatgggcagtgtgttaacactttgtttcataagaggcattgtggtggttgcggtaacaagtgccaacaaggaagttattgtgtctatggaatgtgcagctatgcaaattaattagaggttattataaggacaattcaattatttatttggttctacaaattattttactgtttaatttaattaaatttgattgtaggcagtgattccttttattgtgtatcaaaaagattataatgacaacatgaatgaaatcatatgagatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="16712" stop="15411"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16412" g_stop="15710" g_length="703"/>
          <reference_exon_boundary r_type="cDNA" r_start="11" r_stop="713" r_length="703" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-U585954" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U585954" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16412" e_stop="15710"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCAAACATTTAATTTCTCTCAATATTTCATCTCATAATATCACAAGTATTAGCCATGAATAGCTTGAAAATTTTCTTTTTGCTAGCCATTATAATGGCCTCATTCACTATACTTTCAGTAGCGTCATCAGCTAATGAATTAGAAGAAAAAATGCCGGTAAAAAATAAGAATATGGTTGAATCATTTGAAGTTCCTTTGAATGAAACTGAAGAAAGTTCATCATCTATTCAACGGTTTCTAGGACATAAATCACCTTATTATTACAAGTCTAAAATCATACAAAAACGTATGAGTACATGTAACAAGAACCCTAGAATATGTCGTGCTAAAGGTAGCCCAGGGCCATTTTGCTGCAAGAAGAAGTGTGTAAACGTGTTTGTAGACAGGCAAAACTGTGGATATTGTGGGAAGAAATGCAGGTATAATGAGACTTGTTGCAATGGGCAGTGTGTTAACACTTTGTTTCATAAGAGGCATTGTGGTGGTTGCGGTAACAAGTGCCAACAAGGAAGTTATTGTGTCTATGGAATGTGCAGCTATGCAAATTAATTAGAGGTTATTATAAGGACAATTCAATTATTTATTTGGTTCTACAAATTATTTTACTGTTTAATTTAATTAAATTTGATTGTAGGCAGTGATTCCTTTTATTGTGTATCAAAAAGATTATAATGACAACATGAATGAAATCATATGAGATT</genome_strand>
        <mrna_strand>ATCCAAACATTTAATTTCTCTCAATATTTCATCTCATAATATCACAAGTATTAGCCATGAATAGCTTGAAAATTTTCTTTTTGCTAGCCATTATAATGGCCTCATTCACTATACTTTCAGTAGCGTCATCAGCTAATGAATTAAAAGAAAAAATGCCGGTAAAAAATAAGAATATGGTTGAATCATTTGAAGTTCCTTTGAATGAAACTGAAAAAAGTTCATCATCTATTCAACGGTTTCTAGGACATAAATCACCTTATTATTACAAGTCTAAAATCATACAAAAACGTATGAGTACATGTAACAAGAACCCTAGAATATGTCGTGCTAAAGGTAGCCCAGGGCCATTTTGCTGCAAGAAGAAGTGTGTAAACGTGTTTGTAGACAGGCAAAACTGTGGATATTGTGGGAAGAAATGCAGGTATAATGAGACTTGTTGCAATGGGCAGTGTGTTAACACTTTGTTTCATAAGAGGCATTGTGGTGGTTGCGGTAACAAGTGCCAACAAGGAAGTTATTGTGTCTATGGAATGTGCAGCTATGCAAATTAATTAGAGGTTATTATAAGGACAATTCAATTATTTATTTGGTTCTACAAATTATTTTACTGTTTAATTTAATTAAATTTGATTGTAGGCAGTGATTCCTTTTATTGTGTATCAAAAAGATTATAATGACAACATGAATGAAATCATATGAGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588891" ref_strand="+" ref_description="SGN-U588891 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147779974|emb|CAN75532.1| (e_value=4e-34) hypothetical; (*ATH) AT1G11925.1 (e_value=2e-31) | Symbol: None | stigma-specific Stig1 family protein, contains Pfam profile PF04885: Stigma-specific protein, Stig1 | chr1:4026165-4026585 REVERSE | Aliases: None; ">
      <seq>tctctatattttgcattctaatatatttcatccaatttacaagaagccatgaattgcatgaaaattttcatatttttagccattataatggctatattttcagtagcctcatcagtcgatgaattaaaagaagaaatactcgcaaaagatgagaatgaagttgaatcatttgaagttcctttgaatgaaactgatgaaagttcatcatcatccattattcgaggggctagtcgttttcttctatcacatcatcacaagtcgaaaacaatacataaacgtatgacatgtaacaagaaccctagaatatgtcgttccaaaggtagcccggggtccttttgctgcaagaagaagtgtgtaaacgtgttggctgacaggcaaaactgtggattatgtgggaagaaatgcaggtataatgagacttgttgtagagggaagtgtgttaacactttgtttcacaagaagcattgtgggggttgcggtaacaagtgccagcaaggaagttcttgtgtctatggaatgtgcagctatgcaaattaaaggacaataaattatttatttggctgatgttcaaattatagtatttgatttgtaggcaatgattccttttattgcgtagcaaataaaggatatgccacatcataagttgtttaatttgtttcattttttttttataaaaattgtacaccttgttatacgtagatgactagaagtgtttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="21160" stop="19845"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20860" g_stop="20145" g_length="716"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="716" r_length="716" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-U588891" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588891" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20860" e_stop="20145"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTATATTTTGCATTCTAATATATTTCATCCAATTTACAAGAAGCCATGAATTGCATGAAAATTTTCATATTTTTAGCCATTATAATGGCTATATTTTCAGTAGCCTCATCAGTCGATGAATTAGAAGAAGAAATACTCGCAAAAGATGAGAATGAAGTTGAATCATTTGAAGTTCCTTTGAATGAAACTGATGAAAGTTCATCATCATCCATTATTCGAGGGGCTAGTCGTTTTCTTCTATCACATCATCACAAGTCGAAAACAATACATAAACGTATGACATGTAACAAGAACCCTAGAATATGTCGTTCCAAAGGTAGCCCGGGGTCCTTTTGCTGCAAGAAGAAGTGTGTAAACGTGTTGGCTGACAGGCAAAACTGTGGATTATGTGGGAAGAAATGCAGGTATAATGAGACTTGTTGTAGAGGGAAGTGTGTTAACACTTTGTTTCACAAGAAGCATTGTGGGGGTTGCGGTAACAAGTGCCAGCAAGGAAGTTCTTGTGTCTATGGAATGTGCAGCTATGCAAATTAAAGGACAATAAATTATTTATTTGGCTGATGTTCAAATTATAGTATTTGATTTGTAGGCAATGATTCCTTTTATTGCGTAGCAAATAAAGGATATGCCACATCATAAGTTGTTTAATTTGTTTCATTTTTTTTTTACAAAAATTGTACACCTTGTTATACGTAGATGACTAGAAGTGTTTC</genome_strand>
        <mrna_strand>TCTCTATATTTTGCATTCTAATATATTTCATCCAATTTACAAGAAGCCATGAATTGCATGAAAATTTTCATATTTTTAGCCATTATAATGGCTATATTTTCAGTAGCCTCATCAGTCGATGAATTAAAAGAAGAAATACTCGCAAAAGATGAGAATGAAGTTGAATCATTTGAAGTTCCTTTGAATGAAACTGATGAAAGTTCATCATCATCCATTATTCGAGGGGCTAGTCGTTTTCTTCTATCACATCATCACAAGTCGAAAACAATACATAAACGTATGACATGTAACAAGAACCCTAGAATATGTCGTTCCAAAGGTAGCCCGGGGTCCTTTTGCTGCAAGAAGAAGTGTGTAAACGTGTTGGCTGACAGGCAAAACTGTGGATTATGTGGGAAGAAATGCAGGTATAATGAGACTTGTTGTAGAGGGAAGTGTGTTAACACTTTGTTTCACAAGAAGCATTGTGGGGGTTGCGGTAACAAGTGCCAGCAAGGAAGTTCTTGTGTCTATGGAATGTGCAGCTATGCAAATTAAAGGACAATAAATTATTTATTTGGCTGATGTTCAAATTATAGTATTTGATTTGTAGGCAATGATTCCTTTTATTGCGTAGCAAATAAAGGATATGCCACATCATAAGTTGTTTAATTTGTTTCATTTTTTTTTTATAAAAATTGTACACCTTGTTATACGTAGATGACTAGAAGTGTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566609" ref_strand="+" ref_description="SGN-U566609 Tomato 200607#2 [29 ESTs aligned] (*GB) gi|157360432|emb|CAO69655.1| (e_value=6e-104) unnamed; (*ATH) AT1G11930.2 (e_value=2e-104) | Symbol: None | alanine racemase family protein, contains Pfam domain, PF01168: Alanine racemase, N-terminal domain | chr1:4028733-4030537 FORWARD | Aliases: None; (*SWP) sp|Q1ZXI6|PROSC_DICDI (e_value=8e-55) Proline synthetase co-transcribed bacterial homolog protein OS=Dictyostelium discoideum GN=prosc; ">
      <seq>gaccaatctagaaaaatcagtggacgaggaaacaacaaaaggcgagaaaaaagattcattaagtgcagtgctggagacggaaccgtcagattcaggaatggctgctgcttccgctacggatggtgtcgctgcgacggcagtacggtcggtaattcagcggattgaacacgtggctgaacgatgtggccgcagatcggaccaagtaaggctggtggctgtaagcaaaactaagccagtatctctcctcaaacaagtttacgacgccggtcatcgttgtttcggtgaaaattacgtcaaagagctcattgagaaagctcctcagcttccagatgatatagagtggcatttcatagggaatttgcagagcaataaagtcaagccacttttaactggagtgccaaatcttgctatggtggagacagtagatgatgaaaagattgcaaatcagcttgaccgtgtggctgcgaacattggaagaaagccattgaaagtttttatccaagttaatacaagcggggaagaaactaaatctggtgttgaaccagatgggtgtctggaactcgtgaaacatgttacttcaaactgccctaatcttgaattctgtggcttgatgactattggaatgccagattatacatcgactcctgaaaactttaagactttagcaaaatgtagaagtgaagtttgcgaggcacttggaatatctgaagatcaatgtgagctgtcaatgggcatgtcaggcgactttgaacttgctgttgagatgggcagtacaaatgttcgagttggatctactatatttggtgcaagggaatatccaacgaagtagtcatcgaactaggttgatgaacccagtttagtgaagagagcttgagccaaacatgtaccttaagattttgcagcttcatgtcggaatatgagtgtttgtacgatgccactatggacctcattggctatgtggctacaatatcctgtctgtattctatctattattactgctgaacatagtcttgactcttgagctgcgatctcgatgttcaatagtattttgggatttgatagactctcgtctagatgtactaattgatgataatctgtgagaatacttttggtccgtggatcttcttttttgatagaacgactaaactatgcagggcagctaacagtcgtaacttgtgcaaacatgagttatgtattatttaagtcataaaatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="25050" stop="30078"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25350" g_stop="25671" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="322" r_length="322" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26594" g_stop="26660" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="323" r_stop="389" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27138" g_stop="27184" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="436" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27823" g_stop="27910" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="524" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112">
            <donor d_prob="0.190" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28023" g_stop="28156" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="658" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94">
            <donor d_prob="0.716" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="28251" g_stop="28349" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="659" r_stop="757" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="28350" i_stop="29320" i_length="971">
            <donor d_prob="0.587" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="29321" g_stop="29778" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="758" r_stop="1215" r_length="458" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-U566609" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1215</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U566609" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25350" e_stop="25671"/>
          <exon e_start="26594" e_stop="26660"/>
          <exon e_start="27138" e_stop="27184"/>
          <exon e_start="27823" e_stop="27910"/>
          <exon e_start="28023" e_stop="28156"/>
          <exon e_start="28251" e_stop="28349"/>
          <exon e_start="29321" e_stop="29778"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACCAATCTAGAAAAATCAGTGGACGAGGAAACAACAAAAGGCGAGAAAAAAGATTCATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAGGTAAAGGTTCTATACTCGTGTGTGATGGCCACTACATAATCTAAGCATAGAAAACATATGATTGATTGGTTTGCTGATCGAATTTTTTTGTTTTATTTGACTTTAGGAGTCATTTTATTAAGGTTAAGTTTTATCCAATACAAATACTGTAGGCAAATTTTTGGGCTTATGTAATCTAATCCTGTCTTGTAGTTTAATTTCAATTAACTGGTATTTAGTATAGGAATGTTCTGCTTCAATTGTGTGTTGTTTTTAGCTTAGTATGGATTAATATTAAGACAAATTAGATCTTTTAAACAAATGCCCTTCAGGTATTTTTATGTTTTTGTTATTTGGGATACACTATATTTATAGGAAAATGAAGTTTTTCACCTGTAGCTGAATTGATTTTCTTTCTGAATATTGCCAAGAGGAGATAGTTTGCTTTTAGAATTATTGTTATAGCCCAACCTGCTTATGCACAGTATTGCCCGCTTTGTCCAATAGACCTTGCTGATTAATCCCTCGAGTAAGTCGAAAGATGCCTCAAGTGTGCTACCAAGTTACCTTATTATTTGTCATATACAGTTCAGGACTTTCCTGTCCCTTCCATGGTGTGAATCACCTAATATGTCTTCTACTTCAGAAGTTCACTAGCTTCAGAGTCTGCCAGTTCTTAACCTTTCACAGACATCATAATCACATTCAATTGGTGTTTTGCACTTGTTCATTCTTCTAAGATTTAGCCATGTCATGTATCAATTTTTTGATTATTTTCTTTGTTTTGGGCTAGTTAGTGCTTTTTTTTTTGTGTGTGAGAGAGTATTTTCTTCATGGTAAGTTTTATTTTTTATGTGGGCTGTTGAAAATTTCTGTGGGGAACAATGTGAAGTATTGTGTTTCAGATGAGGTGTTTATACTGCTATCCTTTGGTGAATTGCAGCTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAAGTATGTTCTCCTTCCTTCCTTCACTGTTCCTTCTCCCATCCTTTTCCTTATGGACCAATAAGGAGAAATGTACCTTTCTATGAAAATAGTTTCAGGATGAAGCGAAATCGTAAAAATCGTGATTACATGATAATTTTGTTGGAGAAACAAGGGGAGAAGACTTTTTTTTGGCGTCCTGGTGAAGTCCGTGGAGGGAAGGGTTGTTTCAAGAGTTGTAAACTTTATCTTGGTGAAAGAAACATACTTGCTTCATCAAATTTTGATTATATTAGGTACTGCAAATATTTTAAAAAATGCTAGATATGGTGAAACAGCTCGCCTTCACTTACATCAGTCAGATGATGGACAAAAAGATTCTATCTCCTCTCTGAGTTGGCATGCATGACATAACTTGAATGACGAATTTGAGCCACATTTTTGTGCAACGGGTATAAATGTATAGAGCTTATAATAAATTCTCGTCATCTTTGTTTTCAGCTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAGGTAACTAACACAGACTCTGCTACTAATTTGTCTCCTAGTCCAGTAAATATCTTTAGAACATATTCTGGTTGTTGACTTGTTAATACAAACATCTTTTAACAATACAAAAAACATATGCCTAATAATGATTTCACTCTTAACTTTTGTTTCAATTCAAAAATCATTGTATTTATCTCGAATTTCTTGATCGGTTTTGGTCGAAGTATCCAAAATCGTTTGACCACATCTGGTACAAATCCCACACCTACATCCACGACGTGTCAACACAGGTGCGGCACCGAAAGTGAAGAGTCTGTGCAAGAAGGAAATAAAGCCGGTTTTAGTAAGAAAAAAAAAAGGGTTATTAAGTGAATTTAATAAGAAGCCTTTTTATTTTAATGCACATATTTAATTTATTCGGAGCTATTGGAGAGGGATAGACATTTGGGGAATATGAGTTGAAGCACTAACAAGAATATTTATACTATAATATTCAATATTGTGAGTAGTGTTTATTTTATTTTTGAGAATGGTTACCGTATATTTATTAGCATTAAGGAAATTTTGGCCACCATATTTACAGTTCAAAGAATTAGCAAAATCCTGTCCATCTTGCAAAGATTCTTATATTTTGTTTAATACTTTAATATATTTTGTAGATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAAGTGGGTATCTGGAGTATGTCTCTGATTTATTAAGAGTCATTTGATCTATTTTTGTGAACACTACTATATTCATGAAGGAAAAGCTAATCATGATTTGATTCCATAATTGCAGCTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAGGTTGAGGTTTTATCTTTGTTGTTTCTTCTTGGCCTGGTTGCTATTGTTATATCCTCAACTCAAATATGTTGCTATTTGTCATGCTTGGTTTCAGACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCTGTGAGTGACCTGACTTGTCACTAAGCACATCAAATCATTAGTAAGCTTGGAAGGAACTTGTATAACATGAGTTCTCTGGGGAGCATGTGGTAGTCTGAGTGCACCAATTATACAATCACTCTTTATAAATTAAACCAAAGTATTAACTAGACATCTGACTCAGTTTTCATTACTGGTCTCTGTTGTTAGAATCTTCTTGAGTCTGATGTATAATGCTTTATCGCTGGACAATAAACTCGCCCAGCTCCCCGCCACACCCATGGGATTAAGACGCTCAGACTAGGATTGTAGTTTCACCCCTTAACAGCTTGTTACAATTCAAGGGTTAGTCTGTTTTTATCTTTTGATAAGGTAAAAGTCATGTGACCCGGTTTGAACATTGGAACCAACTAGTGATGCTTATGTTAGTTAGGGTAAGCTGCCCGCCTATATCATACTTCTTGGGGGTGTGGATCTTCCTGGACCCTGTGTGAATGCCGGCTGCCCTTCATATTTGCGCTATTCTCTATCAGTTTCCCATGTGTACTTGTTTTCTGTGGCTGATATTATATATCTGTAGGGTGGATTGTTGTTAAAAGTAGAATTTCGTTTGACGCTCTCAAAAAAGAAAAGAAAAATTTAGTATCACAAGTAGAATTTTATTTGATTAGTTGTTGATTCTTTTGGGAGATCTTATCAGTGATGCGCTGTTCCAACCTCCATCCTACCTCCAATCTGATGACTAGTACTGCAGTCACCCATCAACCTATGCTTGTAGCCTATGGCCCCCTTAATTATGTAAGATATTTTCTTTTAAGGAGTAGTCTAGGCTATTGTATCAGGTAAGCATATTTTATCCTTGTGTCCTGCTATATTCAATAAAAGAAACAAGCACACATTCGTGCTTGCTAGCCAGCATTGGTATTGAATTCTACATATGCTTCGTTTGACCTCATGTTCTGCTATACTTATAATGCTGTCTATTACTACAGGTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTAGGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCAAACATGTACCTTAAGATTTTGCAGCTTCATGTCGGAATATGAGTGTTTGTACGATGCCACTATGGACCTCATTGGCTATGTGGCTACAATATCCTGTCTGTATTCTATCTATTATTACTGCTGAACATAGTCTTGACTCTTGAGCTGCGATCTCGATGTTCAATAGTATTTTGGGATTTGATAGACTCTCGTCTAGATGTACTAATTGATGATAATCTGTGAGAATACTTTTGGTCCGTGGATCTTCTTTTTTGATAGAACGACTAAACTATGCAGGGCAGCTAACAGTCGTAACTTGTGCAAACATGAGTTATGTATTATTTAAGTCATAAAATTA</genome_strand>
        <mrna_strand>GACCAATCTAGAAAAATCAGTGGACGAGGAAACAACAAAAGGCGAGAAAAAAGATTCATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAA................................................................................................................CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAG..............................................................................................ACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTAGGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCAAACATGTACCTTAAGATTTTGCAGCTTCATGTCGGAATATGAGTGTTTGTACGATGCCACTATGGACCTCATTGGCTATGTGGCTACAATATCCTGTCTGTATTCTATCTATTATTACTGCTGAACATAGTCTTGACTCTTGAGCTGCGATCTCGATGTTCAATAGTATTTTGGGATTTGATAGACTCTCGTCTAGATGTACTAATTGATGATAATCTGTGAGAATACTTTTGGTCCGTGGATCTTCTTTTTTGATAGAACGACTAAACTATGCAGGGCAGCTAACAGTCGTAACTTGTGCAAACATGAGTTATGTATTATTTAAGTCATAAAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570644" ref_strand="+" ref_description="SGN-U570644 Tomato 200607#2 [13 ESTs aligned] (*GB) gi|157360435|emb|CAO69658.1| (e_value=2e-84) unnamed; (*ATH) AT1G11940.1 (e_value=4e-69) | Symbol: None | expressed protein, contains Pfam profile PF03267: Arabidopsis protein of unknown function, DUF266 | chr1:4031578-4034076 REVERSE | Aliases: F12F1.19, F12F1_19; ">
      <seq>gtctctctctcattcgctcccttcaaccgccacctgttcaatgtaaagacacacatatatatgtgcatttatttatacacagagagaaagatagagtgcaaatctcttttttcttttaaattttcaggagaaggagcaaagagaattcaaacctatgaagaagaagtcggcggcggcgatggctatggcggcgaccgccggaatgtctgtcagaaacgtgttgtggttgtggtggaagttgttggttctggtttctcttactatttgtgtgttggcttttctaaagcttcaaaactactctctttccgattcggaactttcctcttctacttcttcaatttccagtagatctcgagctctttattatactggcaatcccaaagttgcgttcctctttctagtgcggaggaatttgcctctcgatttcctttggggaaatttctttgagaatgctgaccctggcaatttttccatatatgtacattcggagcctggttttgtttttgatgagtctacaacaagatcaactttcttttataatcgccaattgacaaatagcatcaaggtagcttggggagaatcaagtatgatccacgcagaaaaattattacttggcgcggcacttgatgatccagcaaatcaaagatttgttctcttgtcggacagctgtgtcccactgtacaactttagcttcatatacaactacttgatggcttctccaaggagctttgtggacagttttcttgataaaaaggatgtccgctacaacccaaggatgtcaccctatataccaatgagcaaatggcgaaaagggtcacagtggatcactttaatcaggaagcatgcagaagtggtggcagatgatgatgctgtgtttccagtcttcaagatgttctgcaagagacgtccagcgctggaagccagtaagggaaaaaagaatattgtaagtcaagagtgccttctgctaagaagatgcatttgaatattgtgcgttggccgtgatgctgtgccgacttcctcagttggctcctctctcttggccccatcctttcttgcaaacttcagaagcagcacaactgcattccagatgaacactatgtgcagacattgttggcgatacatgggcttgaaggagaacttgaacgtagaacgataacctatacagagtggaatgaatctgtgacaaatatggagaaaaagggttggcatcccataacatttagctatgcagatgctgggcctgtacagatcaagagaataaaggatatccgcaatgtttactatgaaagcgagtacaggacagagtggtgtcggaataattctacgctagccccctgttttctgattgcaaggaaattctcaggaggggctgcaatgcgcctcttgagtgaaggaatagtttctccattcgacgcctcctctatgatgaatttgacaccatgatatattaattagtctctatttattagtttttatttgtcatatactttgatgagaggataagttgccaattataactggagtgtgtcacaacacctctagcttactgatttaggaaatatattcaaggaagctgatctaagtatggctcatgtaaaacagtactgtagatattttaaaagaatcacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="41785" stop="35136"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41486" g_stop="41039" g_length="448"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="448" r_length="448" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41038" i_stop="40767" i_length="272">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="40766" g_stop="40650" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="565" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="40649" i_stop="39948" i_length="702">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.156" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39947" g_stop="39847" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="566" r_stop="666" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39846" i_stop="38891" i_length="956">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38890" g_stop="38819" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="667" r_stop="738" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="38818" i_stop="38611" i_length="208">
            <donor d_prob="0.880" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="38610" g_stop="38529" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="739" r_stop="820" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="38528" i_stop="37314" i_length="1215">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="37313" g_stop="37233" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="821" r_stop="901" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="37232" i_stop="36912" i_length="321">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="36911" g_stop="36757" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="902" r_stop="1056" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="36756" i_stop="36629" i_length="128">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="36628" g_stop="36569" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1057" r_stop="1116" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="36568" i_stop="36297" i_length="272">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="36296" g_stop="36150" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="1117" r_stop="1263" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="36149" i_stop="35803" i_length="347">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="35802" g_stop="35436" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="1264" r_stop="1630" r_length="367" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-U570644" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1630</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U570644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41486" e_stop="41039"/>
          <exon e_start="40766" e_stop="40650"/>
          <exon e_start="39947" e_stop="39847"/>
          <exon e_start="38890" e_stop="38819"/>
          <exon e_start="38610" e_stop="38529"/>
          <exon e_start="37313" e_stop="37233"/>
          <exon e_start="36911" e_stop="36757"/>
          <exon e_start="36628" e_stop="36569"/>
          <exon e_start="36296" e_stop="36150"/>
          <exon e_start="35802" e_stop="35436"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCTCTCTCATTCGCTCCCTTCAACCGCCACCTGTTCAATGTAAAGACACACATATATATGTGCATTTATTTATACACAGAGAGAAAGATAGAGTGCAAATCTCTTTTTTCTTTTAAATTTTCAGGAGAAGGAGCAAAGAGAATTCAAACCTATGAAGAAGAAGTCGGCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTCAGAAACGTGTTGTGGTTGTGGTGGAAGTTGTTGGTTCTGGTTTCTCTTACTATTTGTGTGTTGGCTTTTCTAAAGCTTCAAAACTACTCTCTTTCCGATTCGGAACTTTCCTCTTCTACTTCTTCAATTTCCAGTAGATCTCGAGCTCTTTATTATACTGGCAATCCCAAAGTTGCGTTCCTCTTTCTAGTGCGGAGGAATTTGCCTCTCGATTTCCTTTGGGGAAATTTCTTTGAGGTTAGTTGATTTTAAATTTTTCAGAGCAAAAATTCATCAAATTTAGGATCAAAATAGCTCTTTGTCCTCCCTTTATTCTCTTTTGTGATGATTGAACTCTTCTTGCAGCTTCAAAATGTGTAACTGTGCATATTTTTTGGGAATAGTAGTGAAATTTCCATCTTTCTTAAATTTGCTAGACACAATGGAAATGTGAAAGTTTTTTGGTTGCACAGATATTCCCTGTTTCAAAACCTGAATATTTGATATCATTATCTGTTTGGTGTTTGCAGAATGCTGACCCTGGCAATTTTTCCATATATGTACATTCGGAGCCTGGTTTTGTTTTTGATGAGTCTACAACAAGATCAACTTTCTTTTATAATCGCCAATTGACAAATAGCATCAAGGTAAGTGGTTTACTTCCCTATATGTGTTGCACATTGTAATACAAAATTTTTCTTTTTTGTATCTTTATTGTTTTTTTTTTTCTGGGTGATTGAAGTAATTTCATTTTTGCAGTGACATGAGCGTTTAATTCAATAAATTCATTTTATTCTTTTTCTTTTGTCCTTTTGATCAGTCTATTTGTGTTTATTGCTCTTGAATATTATCAGGAAATGTATCTGATTGAACTATTATGTAAAGATTTCGTAGGTTGCATGTAATATCCTCCAATAAGTTGGAGATTAGATTCTAAACCTTAAACTTATATATTATTATTGCACCAACCTATAGCGATGTTTGGTATATGGTAAATCAATCACTCTAATTGGTAGGACTCTTTCTGTTTTGGGCGTACCAAATTGATCGACAATGTTCCCAGTATTCCATTTGTAATATTATTTTGTAAACTTTCACAACTTTTAAGGATTTAAAAACTTTATATTTTTTAAGTTCTAAACTATGAAGTGATTTTTCCTGTATCAGATACTATCAATTGGACTACCACTACTTTAATATCTGTATCCACTACCATCAATACAAGATTTAAAGTCAATTTGACATTTTAAAAGCGGTCTCATAAAAAAATGTAGTAATTCATTTACTTCTGTTTGCTCTTTTTATAACTTTCATCTCTTTACCAGAACGATACTAAGAGTTACCTGTAGGTAGCTTGGGGAGAATCAAGTATGATCCACGCAGAAAAATTATTACTTGGCGCGGCACTTGATGATCCAGCAAATCAAAGATTTGTTCTCTTGTCGGACAGGTAGACTTTTTAATTCAAAAACATCTCAACACATCTCTCAGATAAGTCTGTCTAGGCGGCTTGTTAATGTGCATGCACGTTCCTTATTGATGCATGGCATTCTCAACTATTGGTTTTCACGAACTATCTTTTTATGCTTTCGTTTTCCTCATGACCCTGATTTACTTGATTCTTTCCCATAAATGGAGAAGTCCAGCATCTTTCAAAGCACCCCTTCATATATTTTGAAGTTCCTTTGATGATCAAACTATTTAGACACATTTCTTTGGAGTACCTATCTAACTAAGATCGAATCTCTTATTAGCCATCTCAAGCTTAATAACCTATTCACACCTTTTGTTTTGTAAATTTACACACAGCTCAAACCGTGTGATCTGAATTGCGTTTGAGGGAATACTTGCATTAGATATCAAGACTCCGGTATAGCTGTAATATTTTTGATTCTTATTATTGAAGAAGAAGCAGTCATACAACATTTTTTAGACATGCTTAGCACCAATGCTAATTACTATCATTACTATATTGAATAGACATGGATATGGTAGGAAGTGAATTCACACTGGAATTATTGAATGGACAGCACAATCATATTCTTGCTTGGTAAATGGTCATAGTACATTTATAAGACAATACAAATTTCGTATCCAAAAAGGGGAAAAAAGAAAAGAAAAAGAAAACAAATGCATATTCAGAACTTTCTGGCGCACATACAGTCCATGCTAAATAACTTAAAAATCGTCCAGTATGCAGTTGCACTAGAGACTAAGTACCTAGAAAAAATTATCTTCTTGACTTCTCGTTAATGAATCATGAGAAAACATACTTCAAAAATGTAGTGTGTTCCAATTCTTTTATCCATGTATTTCCCTTCTGTTTGTTTCACCCAATTATTGAGTTATGCTTTGTGCCTTTGTTTTAAGAATTTTTCTCTAAATGTGTGATGGTTGATATTGCAGCTGTGTCCCACTGTACAACTTTAGCTTCATATACAACTACTTGATGGCTTCTCCAAGGAGCTTTGTGGACAGGTAACATGGATGATAAAACTTGTGAGTTGTGTGATTGCTGGACAGGTGGTTGATTTTGTGGAACTGGTAGGGAAGGATAGATATAGAAAAAGCAATCAATTCCTTAAGTGGGTTCAGGATTTAAGGATCTGGTTGAATTACTAATGAATTATTTCGAATTCTCGTATTTGCATCAACATTGGATGAATGAGGTCTGTTTGTCTTCCAGTTTTCTTGATAAAAAGGATGTCCGCTACAACCCAAGGATGTCACCCTATATACCAATGAGCAAATGGCGAAAAGGGTCACAGGTAATTGTCCCTCAGTCTGAATTATAAGCACATCTATGTCCCACCAAGCTCTACTATGAAATTCATTACTCTATCGTGATTAAAAAAACTAAATCCATTAACTTGTGTATTTTTCTGCTCTAGTGGAGTTGAATTTTCATTAATTTCTTGCTAAGCAAAATTCAAGGCATATGATAGGGTAGAGGGGTGTTGGCAAGCAGGGTGTGACAACTCTAGAAGCTTCGAAATGCTTGTTTTTTCAGATTAATCCAAAACCATGTTCAAAGATCAAAGGAAGGAGCACTTACCAGCTCCTTCAAATGGGAAAATGATGTACAGAAGTAAAAAGTAACTCAGAAACCAAAGAGGTCTGCAAAAAACTTGTGCTGATAACAACTAAAAGCACCTATAAACATGATCTAAAAGGAACCTATGTGCTTGAAACGTGTCAACCTATATAACTACTTAACAAAAATTGAAAGATATTATTCAGAAGGAAATTACACACCATCTTAATGATCTTTGTTGAACTTGTATCTGTGAATAAAAGAAATAATTCAATACGTGAAAATGTAGTCCATGAAATCTGTGAGTCCTTGCCGTCTTAAGCGTAGGGTTAGGCCTTATGGTCAATGAAGTGAATTGAGAACCATGAGGTATTGGGTTCGAATCCTAGCGGAGACAAAAACATTTAGCGATTTCTTCTCATTTGTCCAATCATTGGTGGACAGGGTTAGCAGGTACCCCATGGAATTAGTTGAGGTATGTGTGTTAGTTGACCCAAACACCATGAAAGTTTCTTGTTAGATCAAGACTGTGTTCTAAACATAAGATTTTAGCATGGCGGTCAATCAATGTGGGAAATATTGATTGATTTTTGCCCCCTAAAATGTCATTGTGACCTACTAATTTTAAAGGATAGTTGCTGAACTTCAATGAGAAGAACTATTTTTTTAATTGACGAAATTTATGTGTGCTCAAGTTATTGTTGCTCTTTAAACATCTTCTTTAGTTCCTGATCCAGAGTCATTTTTAGTTTCATCCAGCAGTTTTTTTCAACTTTTAAAGTTCATAGTTTCTCTATTCTATAAGCTAGATAGACTTGTTTTTTGAAGCTCAGATGTTTTTTAAAAAAATCGTAATATCTCAAATCAATAAAATATACTGCATGATCATATGCGTATGACACTGGTCCATATCTGCTTCTATGAGTTTTGACTTGACATTTTAGTCCAGTGGATCACTTTAATCAGGAAGCATGCAGAAGTGGTGGCAGATGATGATGCTGTGTTTCCAGTCTTCAAGATGTTCTGCAAGGTTCAATATCATATGCTCTTCCCTCTTTAAACTTCACATGTGTGTTTACATGGATAATGCTATAAGGTTAACGGCATGCTTAATAAAGCATTGGTGCTTCAGGTTTATAAAATTACTAGTGCTACTCAACAGCCTAAAAATCCCTTATTTACTAATGTATACATGATGATGGACATGTTTTTGTAGTTTAATGTCTTCCGTAGTTGGGTTACTGTCTGTTACATTTTCTAATTGGAACTGTTAAGTGTGGTTTTACACTGATGCATCATACCTCTGCTTCATTTAGGTGATAACTGATAGAGTCATGATTTAATCTTGCAGAGACGTCCAGCGCTGGAAGCCAGTAAGGGAAAAAAGAATATTGTAAGTCAAGAGTGCCTTCTGCTAAGAAGATGCATTTGAATATTGTGCGTTGGCCGTGATGCTGTGCCGACTTCCTCAGTTGGCTCCTCTCTCTTGGCCCCATCCTTTCTTGCGTCCGTGTTACTTTTGTCATTCCAAGAACCACCCCCACCCCCATCCCCACCCACCCCACCCCGTTATACAGACATAACTTCTCCTCTATTGATACTTGTTTCTTCTAACCTTGAAATAAACCTTGCAGAAACTTCAGAAGCAGCACAACTGCATTCCAGATGAACACTATGTGCAGACATTGTTGGCGGTAAGTATCAGGCATATTCTTCCCATCTTTAGGCTTCTTGTCTGTTCTCAGGACTCTGAACTTACCAGACTTATTTACCTAGGTTATGTTTATCTTTAGTCTTATTGTGTGTTCTCAGGACTCCGTACTACATCTTTCTTTAGGAAATCCATTCTTTTAGATAAGATACACAAAGTACTCATGCTTATAGATATATCAAGGATTTTTCTGTGTGGACTGCTTTTGAGAATTATTCTTCGGGACTAAGGTTCTAGATTTTAATTGGTTTACAGATACATGGGCTTGAAGGAGAACTTGAACGTAGAACGATAACCTATACAGAGTGGAATGAATCTGTGACAAATATGGAGAAAAAGGGTTGGCATCCCATAACATTTAGCTATGCAGATGCTGGGCCTGTACAGATCAAGAGAATAAAGGTGTGTATTTGGATATGTCTAATAATTTGTCATCTCTAGCTTTGGGCATTTGACGCTATGATCATATCTGGTTACAGTTTCATGTTGGCATAGTTTCAGCTTCTCTTTCTTTGACTTTGCTTTTTGGTTTCCTTGTTAACTTCCCCGCTGGTTTTCCTTCATTCCCTTTTTTGGTTTTCCTTCCCTGACTTCCATAGTTGTTTTCTTTCTTAAAATCTTTTGTTGGTTATTTATATAACTTCTCTAGTTGTTTTTGTGTCTTCAACTCTTCTGTTTGGTATTGCATTAAGATATATTGCCTACTGAACTGATTGCTTTGTAACTTGCTATCCTTACAATTTTTACAGGATATCCGCAATGTTTACTATGAAAGCGAGTACAGGACAGAGTGGTGTCGGAATAATTCTACGCTAGCCCCCTGTTTTCTGATTGCAAGGAAATTCTCAGGAGGGGCTGCAATGCGCCTCTTGAGTGAAGGAATAGTTTCTCCATTCGACGCCTCCTCTATGATGAATTTGACACCATGATATATTAATTAGTCTCTATTTATTAGTTTTTATTTGTCATATACTTTGATGAGAGGATAAGTTGCCAATTATAACTGGAGTGTGTCACAACACCTCTAGCTTACTGATTTAGGAAATATACACAAGGAAGCTGATCTAAGTATGGCTCATGTAAAACAGTACTGTAGATATTTTAAAAGAATCACAT</genome_strand>
        <mrna_strand>GTCTCTCTCTCATTCGCTCCCTTCAACCGCCACCTGTTCAATGTAAAGACACACATATATATGTGCATTTATTTATACACAGAGAGAAAGATAGAGTGCAAATCTCTTTTTTCTTTTAAATTTTCAGGAGAAGGAGCAAAGAGAATTCAAACCTATGAAGAAGAAGTCGGCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTCAGAAACGTGTTGTGGTTGTGGTGGAAGTTGTTGGTTCTGGTTTCTCTTACTATTTGTGTGTTGGCTTTTCTAAAGCTTCAAAACTACTCTCTTTCCGATTCGGAACTTTCCTCTTCTACTTCTTCAATTTCCAGTAGATCTCGAGCTCTTTATTATACTGGCAATCCCAAAGTTGCGTTCCTCTTTCTAGTGCGGAGGAATTTGCCTCTCGATTTCCTTTGGGGAAATTTCTTTGAG................................................................................................................................................................................................................................................................................AATGCTGACCCTGGCAATTTTTCCATATATGTACATTCGGAGCCTGGTTTTGTTTTTGATGAGTCTACAACAAGATCAACTTTCTTTTATAATCGCCAATTGACAAATAGCATCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCTTGGGGAGAATCAAGTATGATCCACGCAGAAAAATTATTACTTGGCGCGGCACTTGATGATCCAGCAAATCAAAGATTTGTTCTCTTGTCGGACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGTCCCACTGTACAACTTTAGCTTCATATACAACTACTTGATGGCTTCTCCAAGGAGCTTTGTGGACAG................................................................................................................................................................................................................TTTTCTTGATAAAAAGGATGTCCGCTACAACCCAAGGATGTCACCCTATATACCAATGAGCAAATGGCGAAAAGGGTCACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATCACTTTAATCAGGAAGCATGCAGAAGTGGTGGCAGATGATGATGCTGTGTTTCCAGTCTTCAAGATGTTCTGCAAG.................................................................................................................................................................................................................................................................................................................................AGACGTCCAGCGCTGGAAGCCAGTAAGGGAAAAAAGAATATTGTAAGTCAAGAGTGCCTTCTGCTAAGAAGATGCATTTGAATATTGTGCGTTGGCCGTGATGCTGTGCCGACTTCCTCAGTTGGCTCCTCTCTCTTGGCCCCATCCTTTCTTGC................................................................................................................................AAACTTCAGAAGCAGCACAACTGCATTCCAGATGAACACTATGTGCAGACATTGTTGGCG................................................................................................................................................................................................................................................................................ATACATGGGCTTGAAGGAGAACTTGAACGTAGAACGATAACCTATACAGAGTGGAATGAATCTGTGACAAATATGGAGAAAAAGGGTTGGCATCCCATAACATTTAGCTATGCAGATGCTGGGCCTGTACAGATCAAGAGAATAAAG...........................................................................................................................................................................................................................................................................................................................................................GATATCCGCAATGTTTACTATGAAAGCGAGTACAGGACAGAGTGGTGTCGGAATAATTCTACGCTAGCCCCCTGTTTTCTGATTGCAAGGAAATTCTCAGGAGGGGCTGCAATGCGCCTCTTGAGTGAAGGAATAGTTTCTCCATTCGACGCCTCCTCTATGATGAATTTGACACCATGATATATTAATTAGTCTCTATTTATTAGTTTTTATTTGTCATATACTTTGATGAGAGGATAAGTTGCCAATTATAACTGGAGTGTGTCACAACACCTCTAGCTTACTGATTTAGGAAATATATTCAAGGAAGCTGATCTAAGTATGGCTCATGTAAAACAGTACTGTAGATATTTTAAAAGAATCACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588572" ref_strand="+" ref_description="SGN-U588572 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gagaaggagcaaagagaattcatacctatgatgaaaaagtcggcggcggcgatggctatggcggcgaccgccggaatgtctgtcataaacgtgttgagggtgtggtggaagtggctgtgcctggtttctcttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="41659" stop="40925"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41359" g_stop="41225" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-U588572" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>135</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588572" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41359" e_stop="41225"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAGGAGCAAAGAGAATTCAAACCTATGAAGAAGAAGTCGGCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTCAGAAACGTGTTGTGGTTGTGGTGGAAGTTGTTGGTTCTGGTTTCTCTTACT</genome_strand>
        <mrna_strand>GAGAAGGAGCAAAGAGAATTCATACCTATGATGAAAAAGTCGGCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTCATAAACGTGTTGAGGGTGTGGTGGAAGTGGCTGTGCCTGGTTTCTCTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U588580" ref_strand="+" ref_description="SGN-U588580 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147834332|emb|CAN65377.1| (e_value=2e-42) hypothetical; (*ATH) AT4G23160.1 (e_value=3e-12) | Symbol: None | protein kinase family protein, contains Pfam domain PF00069: Protein kinase domain | chr4:12129496-12134198 FORWARD | Aliases: F21P8.50, F21P8_50; (*SWP) sp|P04146|COPIA_DROME (e_value=8e-14) Copia protein OS=Drosophila melanogaster GN=GIP; ">
      <seq>gagatggtcttcagaacaaagttaaatgcagatagttccatcaacaaatacaagacgaggcttgtagttaaagggtatgcacaaatttatggtgtcgattactctgacaccttttctcctgttgcaagattagacacaatcaggttgctacccgcaatagcagcacaaatggattctcagatagtgattaggccagatccgcagatgatatgagaagtacctctcgccattgtttcagcctaggttcaggaatattctcatggtcatctaagaaacaggaaattgttgcacaatcaacagcagcaacaggagcagtaaaccaagtcttgtggcttagaaagatcatgtatgatttacatgtggaacagaaggaaagtactagcattcttgtcgacaaccaggcagctattgcaatctcaaacaatccggtgtttcacaagaagaccaagcatttcaacatcaagttctattttctgagagaagtacagcaaaggggagaagtaactctagtctatactaagactttaccgatcagcaaattcgagcttcttagacagaaaattggagtttgcagtatccaaagcaaggaggagtgcaaggaatctgttttgaaccgcagtaaatttaattttactgcctatgttttaagttagacttagtcaattagttgttagtcatgctttcctattattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="48580" stop="47288"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48280" g_stop="47588" g_length="693"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="693" r_length="693" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-U588580" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U588580" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48280" e_stop="47588"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGATGGTCTTCAGAACAAAGTTAAATGCAGATAGTTCCATCAACAAATACAAGACGAGGCTTGTAGTTAAAGGGTATGCACAAATTTATGGTGTCGATTACTCTGACACCTTTTCTCCTGTTGCAAGATTAGACACAATCAGGTTGCTACCCGCAATAGCAGCACAAATGGATTCTCAGATAGTGATTAGGCCAGATCCGCAGATGATATGAGAAGTACCTCTCGCCATTGTTTCAGCCTAGGTTCAGGAATATTCTCATGGTCATCTAAGAAACAGGAAATTGTTGCACAATCAACAGCAGCAACAGGAGCAGTAAACCAAGTCTTGTGGCTTAGAAAGATCATGTATGATTTACATGTGGAACAGAAGGAAAGTACTAGCATTCTTGTCGACAACCAGGCAGCTATTGCAATCTCAAACAATCCGGTGTTTCACAAGAAGACCAAGCATTTCAACATCAAGTTCTATTTTCTGAGAGAAGTACAGCAAAGGGGAGAAGTAACTCTAGTCTATACTAAGACTTTACCGATCAGCAAATTCGAGCTTCTTAGACAGAAAATTGGAGTTTGCAGTATCCAAAGCAAGGAGGAGTGCAAGGAATCTGTTTTGAACCGCAGTAAATTTAATTTTACTGCCTATGTTTTAAGTTAGACTTAGTCAATTAGTTGTTAGTCATGCTTTCCTATTATTT</genome_strand>
        <mrna_strand>GAGATGGTCTTCAGAACAAAGTTAAATGCAGATAGTTCCATCAACAAATACAAGACGAGGCTTGTAGTTAAAGGGTATGCACAAATTTATGGTGTCGATTACTCTGACACCTTTTCTCCTGTTGCAAGATTAGACACAATCAGGTTGCTACCCGCAATAGCAGCACAAATGGATTCTCAGATAGTGATTAGGCCAGATCCGCAGATGATATGAGAAGTACCTCTCGCCATTGTTTCAGCCTAGGTTCAGGAATATTCTCATGGTCATCTAAGAAACAGGAAATTGTTGCACAATCAACAGCAGCAACAGGAGCAGTAAACCAAGTCTTGTGGCTTAGAAAGATCATGTATGATTTACATGTGGAACAGAAGGAAAGTACTAGCATTCTTGTCGACAACCAGGCAGCTATTGCAATCTCAAACAATCCGGTGTTTCACAAGAAGACCAAGCATTTCAACATCAAGTTCTATTTTCTGAGAGAAGTACAGCAAAGGGGAGAAGTAACTCTAGTCTATACTAAGACTTTACCGATCAGCAAATTCGAGCTTCTTAGACAGAAAATTGGAGTTTGCAGTATCCAAAGCAAGGAGGAGTGCAAGGAATCTGTTTTGAACCGCAGTAAATTTAATTTTACTGCCTATGTTTTAAGTTAGACTTAGTCAATTAGTTGTTAGTCATGCTTTCCTATTATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576392" ref_strand="+" ref_description="SGN-U576392 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|147771612|emb|CAN64779.1| (e_value=2e-49) hypothetical; (*ATH) ATMG00820.1 (e_value=5e-17) | Symbol: ORF170 | hypothetical protein | chrM:228573-229085 REVERSE | Aliases: ORF170; (*SWP) sp|P92520|M820_ARATH (e_value=5e-16) Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820; ">
      <seq>tttcttaagtgtttggttgtgtctgttttgttcatgttcctcatgttagacgtgacaaacttgacaagaaggcaatcggcaatcataggcatccatgtggcttacagtgaagtttctaaagcctacaaggtctatcatcctcagacaaagaagatgacaattacaagagatgttcattttagtgagaatgaatagtgggactggaagaactctcataaatcaggaagtcgctctctagaagcaaacatcagtcctcctgaagagcaaaaaacagaacactggcagcaagaactagaagatgatcatccagtcaaggggaggaggttgttgtcagatatctatcagaggtgtaatgtcgccatctatgaacctgctggtcccgtagaagctttgcaagacccaaaatggaagaaagcaatggaggaggagatctccatgattgagaaaaataaaacttgggtgctggtaaacaaacctgaagatagaaaagtcattggtgtgagatgggtcttcagaacaaagttaaatgcagatagttccatcaacaaatacaaagcgaggcttgtagttaaagggtatgcacaaattttatggtattgattactctgacactcctgttgcagaattaacacaatcaaattgctactccca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="49074" stop="47860"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48774" g_stop="48125" g_length="650"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="651" r_length="651" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-U576392" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576392" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48774" e_stop="48125"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTTAAAGTGTTTGGTTGTGTCTGTTTTGTTCATGTTCCTCAGGTTAAACATGACAAACTTGACAAG-A---AA---GCAATCATAGGCATCCATGTGGGTTACAGTGAAGTTTCTAAAGCCTACAAGGTTTATCATCCTCAGACAGGAAAGATGACAATTACAAGAGATGTTCATTTTAGTGAGAATGAACAGTGGAACTGGAAGAACTCTCAGAAATCAGGAAGACGCTCTCTAGAAGCAAACATCAGCCCTCCTGAAGAGCAAAAAATAGAACACTGGCAGCAAAAACTAGAAGATGATCATCCAGTCAAGGGGAGAAGATTGTTGTCAGATATCTATCAGAGGTATAATGTCGCCATCTATGAACCTGCTGGTCCAGTAGAAGCTTTGCAAGACCCAAAATGGAAGAAAGCAATGGAGGAGGAAATCTCCATGATTGAGAAAAATAAAACTTGGGTGCTTGTCAACAAACCTGAAGATAGAAAAGTCATTGGTGTGAGAT-GGTCTTCAGAACAAAGTTAAATGCAGATAGTTCCATCAACAAATACAAGACGAGGCTTGTAGTTAAAGGGTATGCACAAA-TTTATGGTGTCGATTACTCTGACACCTTTTCTCCTGTTGCAAGATTAGACACAATCAGGTTGCTACCCGCA</genome_strand>
        <mrna_strand>TTTCTT-AAGTGTTTGGTTGTGTCTGTTTTGTTCATGTTCCTCATGTTAGACGTGACAAACTTGACAAGAAGGCAATCGGCAATCATAGGCATCCATGTGGCTTACAGTGAAGTTTCTAAAGCCTACAAGGTCTATCATCCTCAGACAAAGAAGATGACAATTACAAGAGATGTTCATTTTAGTGAGAATGAATAGTGGGACTGGAAGAACTCTCATAAATCAGGAAGTCGCTCTCTAGAAGCAAACATCAGTCCTCCTGAAGAGCAAAAAACAGAACACTGGCAGCAAGAACTAGAAGATGATCATCCAGTCAAGGGGAGGAGGTTGTTGTCAGATATCTATCAGAGGTGTAATGTCGCCATCTATGAACCTGCTGGTCCCGTAGAAGCTTTGCAAGACCCAAAATGGAAGAAAGCAATGGAGGAGGAGATCTCCATGATTGAGAAAAATAAAACTTGGGTGCTGGTAAACAAACCTGAAGATAGAAAAGTCATTGGTGTGAGATGGGTCTTCAGAACAAAGTTAAATGCAGATAGTTCCATCAACAAATACAAAGCGAGGCTTGTAGTTAAAGGGTATGCACAAATTTTATGGTATTGATTACTCTGACA------CTCCTGTTGCAGAATTA-ACACAATCAAATTGCTACTCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U572637" ref_strand="+" ref_description="SGN-U572637 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|147773742|emb|CAN74190.1| (e_value=0) hypothetical; (*ATH) AT4G04350.1 (e_value=1e-179)  Symbol: EMB2369 | leucyl-tRNA synthetase, putative / leucine--tRNA ligase, putative, similar to SP:P36430 Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase) (LeuRS) {Bacillus subtilis}; contains Pfam profile PF00133: tRNA synthetases class I... ; (*SWP) sp|Q5KW09|SYL_GEOKA (e_value=7e-141) Leucyl-tRNA synthetase OS=Geobacillus kaustophilus GN=leuS; ">
      <seq>gcttatcaggctgaagtgcctgtcaattggtgtccagcacttggtactgtcttggcaaatgaagaagtaattgatggtgtaagtgaaagaggggggcatccagtcatcagaaagcctatgcggcagtggatgttgaggataactgcttatgctgaccgtcttcttgaggatttagatgacctatactggcctgaaagtataaaggaaatgcagaggaattggattggtaggtcagaaggagcagaattggattttgttgtcataaatggtaacagtcaggaagaagagaaaagaataacagtttatacaacaagaccagacactatttttggtgcaacatacttagtccttgcacctgagcatccctttctgtcatcacttgtatcagaagcacaaagtaaacatgtagaggagtacagggaacatgcttttagaaagagtgaccttgagaggactgagcttcaaaaggaaaaaacaggcgtctttactggttgttatgcaaaaaatccagccaatggccaagctgttcctatttgggttgctgattatgtcttgggaagctacgggacaggagcaataatggctgtgcctgcccatgacacacgcgactttgaatttgctatgaagtacactatcccaatttcttgggttgtaagaccagatgatagcaattgtggcaattttgagaaaccatattcaggtgaaggatcaatgataaattcatcatattcagagtcagggcttgacattaatggtttgcctagcaaagaagctgcttcaagagtcgtccaatggcttgagaaaagtggaaacgggaagaaaaaggtaaattacaagttaagggactggctttttgcccggcaacgctattggggggagcctattccagttatctttttggatgacacaggagaaggtattccagttccagaaaccgagcttcctcttacccttcctgagttggatgatttcactcccactgggactggggagccacctcttgccaaagcagattcttgggttataaccaaagatcctttatctgaaaaacctgctaggcgagaaacaaacaccatgccccagtgggctggttcttgctggtactatctaagatttatggacccaaaaaactccagcgcattggttgacaaggcacaagaacagtactggggccctgttgacgtgtatgttgggtgtgctgagcatgctgntcttcatttactttatgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="54520" stop="51033"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54316" g_stop="54308" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="9" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54307" i_stop="54215" i_length="93">
            <donor d_prob="0.969" d_score="0.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54214" g_stop="54110" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="114" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54109" i_stop="53970" i_length="140">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.918" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53969" g_stop="53746" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="338" r_length="224" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53745" i_stop="53658" i_length="88">
            <donor d_prob="0.804" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53657" g_stop="53591" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="405" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="53590" i_stop="53506" i_length="85">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.137" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="53505" g_stop="53351" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="560" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="53350" i_stop="53169" i_length="182">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="53168" g_stop="52904" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="561" r_stop="825" r_length="265" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="52903" i_stop="52743" i_length="161">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="52742" g_stop="52548" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="826" r_stop="1020" r_length="195" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="52547" i_stop="52399" i_length="149">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="52398" g_stop="52319" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1021" r_stop="1100" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="52318" i_stop="51594" i_length="725">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="51593" g_stop="51531" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1101" r_stop="1163" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="51530" i_stop="51400" i_length="131">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="51399" g_stop="51333" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1164" r_stop="1230" r_length="67" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-U572637" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1230</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U572637" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54316" e_stop="54308"/>
          <exon e_start="54214" e_stop="54110"/>
          <exon e_start="53969" e_stop="53746"/>
          <exon e_start="53657" e_stop="53591"/>
          <exon e_start="53505" e_stop="53351"/>
          <exon e_start="53168" e_stop="52904"/>
          <exon e_start="52742" e_stop="52548"/>
          <exon e_start="52398" e_stop="52319"/>
          <exon e_start="51593" e_stop="51531"/>
          <exon e_start="51399" e_stop="51333"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTATCAGGTTTGAAGTTTTCTGAATTTCATTTTTATTATGGCAATGGTAGGTTGAAGTGACCCTCTTCGACTTATCAATGTTCTTTGAATCCAATATTAGGCTGAAGTGCCTGTCAATTGGTGTCCAGCACTTGGTACTGTCTTGGCAAATGAAGAAGTAATTGATGGTGTAAGTGAAAGAGGGGGGCATCCAGTCATCAGAAAGGTAAGCTTTCAAATACCATGTTACATTTTGAGGTAGGAAATTTCAAAAGAACCGTACTTCTGTTTACTCAATGTCTAGTCCTTATTTTCATTGCCTGGATGGTTTCATGATTTTACAGTACATTGTTTATTGCCAAGCAGCCTATGCGGCAGTGGATGTTGAGGATAACTGCTTATGCTGACCGTCTTCTTGAGGATTTAGATGACCTAGACTGGCCTGAAAGTATAAAGGAAATGCAGAGGAATTGGATTGGTAGGTCAGAAGGAGCAGAATTGGATTTTGTTGTCATAAATGGTAACAGTCAGGAAGAAGAGAAAAGAATAACAGTTTATACAACAAGACCAGACACTATTTTTGGTGCAACGTATGCGTTCTTCTTTTGATATCTAATCATTAATGCCCCATTTGTAGACTACATTTCACATGTCGCTAGTCTTCTTTTTGCTGTGCAGATACTTAGTCCTTGCACCTGAGCATCCCTTTCTGTCATCACTTGTATCAGAAGCACAAAGTAAACATGTATGCTCTTCTTCCCCTTGATCTTCTCTTAATCTCAAAATGTTGTTCATTCTTGTTCTTTTAAGAGATGACGGATGTGAGACAGGTAGAGGAGTACAGGGAACATGCTTTTAGAAAGAGTGACCTTGAGAGGACTGAGCTTCAAAAGGAAAAAACAGGCGTCTTTACTGGTTGTTATGCAAAAAATCCAGCCAATGGCCAAGCTGTTCCTATTTGGGTTGCTGATTATGTCTTGGGAAGGTTGTCTACCTTCTTATCTCCTCTTGTCCTACATTTATCGAACAATATATGTCATATGAGTCTATGACTGCTTAATGCTCTCGTTACGAATGTGAACCTAATACTAAAGTATTTATTTGTCTTACGAACTTCGTGTTGACAAAGTTTTGGGGTTTTATAGTAGCGTAACAATTATGATGCAGCTACGGGACAGGAGCAATAATGGCTGTGCCTGCCCATGACACACGCGACTTTGAATTTGCTATGAAGTACACTATCCCAATTTCTTGGGTTGTAAGACCAGATGATAGCAATTGTGGCAATTTTGAGAAACCATATTCAGGTGAAGGATCAATGATAAATTCATCATATTCAGAGTCAGGGCTTGACATTAATGGTTTGCCTAGCAAAGAAGCTGCTTCAAGAGTCGTCCAATGGCTTGAGAAAAGTGGAAACGGGAAGAAAAAGGTAACCTCCTCTGATTTATGAGGGATTCCTCATAAGTTTGTATATCAGTTTTTGGAAAGTTGATGATCTTAAACAGAATTATGAAGATAAGTATGAAGGAAGCAATTATCATTTCTACTGCTCAGAAGATCTTACTTATTGCCAGATTTATCTTGCTTCAGGTAAATTACAAGTTAAGGGACTGGCTTTTTGCCCGGCAACGCTATTGGGGGGAGCCTATTCCAGTTATCTTTTTGGATGACACAGGAGAAGGTATTCCAGTTCCAGAAACCGAGCTTCCTCTTACCCTTCCTGAGTTGGATGATTTCACTCCCACTGGGACTGGGGAGCCACCTCTTGCCAAAGCAGATTCTTGGGTAGGTTTTGCCTAATATGTGATGATTTCAACTTGACAAACATTGGTTCTTTGTCATTTGGTACTTCTCTTTTTCCGTTTTGTTCTTCCCTATTAGCTTACAACACTTCATATAATGACATTTACTATTTTGACTGAACAATTTGTCAGGTTATAACCAAAGATCCTTTATCTGAAAAACCTGCTAGGCGAGAAACAAACACCATGCCCCAGTGGGCTGGTTCTTGCTGGTAATCAGCTTTGTATTTGCTTCAATATTGGGTGTTTATGGAAGTTTAATTTCTTTTACAAGATCTACACCTAAAAAGACTTTGTATTTAACTAGTATTAGTTTTGTTTTTAAATATTCTATATGGTTGTCATTTGTCAAAAGGGAGAAATCTAATGGGAATAGTACCAATTTTTTTTTAAAAAAAGTGAGAAAACTAATGAGAATATATATCTTTTATGTGTTTGTGTTTGTGGGAAAGAGTACGATAATATGGACAAGAAGCATAGAATATTATAAGGCAAAGCAGATAGGAAGGATTTTTACACTTACCAATTATAAAAATGAAGAAGATTGGAAGTACTTTACCCTGAATTTACTTGTTCGTTATCCATAGTGGGTGGCATTGGGTGCATAATTTGTCACCGGTAGTTATGGAAGTAAAAGGCCAACACTTACCTACTGCATTTAGATAAGAAGAGTGTCTGATGTTGACTCTCAAAATTTGGCTGCTTACTATGGGATTGGAAGTAAATGTGAGAAAAGCAAGGGATCTATTAATACTTAAATGTTATGTACTTAAACTGATAATGTGTGGTTCAAAAAACCAATGCAACTTTCACCTTCGTCCTGTATTTAAAGAAGAAACCATCTTAGCTTTCAAGGTTCCTATGGATGTGTCATATGTCTGATCTGTATCTTGGTGCTTTTCATTGAACCATGTCACTCATCCTCTTTGATATGCAGGTACTATCTAAGATTTATGGACCCAAAAAACTCCAGCGCATTGGTTGACAAGGCACAAGAACAGTGAGTTTGCTTTCTCTTTGTACAATCAGAGCGGCCATATTTTTCTGGCTTTCATTTTGTTATACATGCTAGTTTGGAAAGTCTTGGTGTTTCAAAGTATTAGCCATTCATTTGCTTCAATTTTCTTATAGGTACTGGGGCCCTGTTGACGTGTATGTTGGTGGTGCTGAGCATGCTGTTCTTCATTTACTTTATGCC</genome_strand>
        <mrna_strand>GCTTATCAG.............................................................................................GCTGAAGTGCCTGTCAATTGGTGTCCAGCACTTGGTACTGTCTTGGCAAATGAAGAAGTAATTGATGGTGTAAGTGAAAGAGGGGGGCATCCAGTCATCAGAAAG............................................................................................................................................CCTATGCGGCAGTGGATGTTGAGGATAACTGCTTATGCTGACCGTCTTCTTGAGGATTTAGATGACCTATACTGGCCTGAAAGTATAAAGGAAATGCAGAGGAATTGGATTGGTAGGTCAGAAGGAGCAGAATTGGATTTTGTTGTCATAAATGGTAACAGTCAGGAAGAAGAGAAAAGAATAACAGTTTATACAACAAGACCAGACACTATTTTTGGTGCAAC........................................................................................ATACTTAGTCCTTGCACCTGAGCATCCCTTTCTGTCATCACTTGTATCAGAAGCACAAAGTAAACAT.....................................................................................GTAGAGGAGTACAGGGAACATGCTTTTAGAAAGAGTGACCTTGAGAGGACTGAGCTTCAAAAGGAAAAAACAGGCGTCTTTACTGGTTGTTATGCAAAAAATCCAGCCAATGGCCAAGCTGTTCCTATTTGGGTTGCTGATTATGTCTTGGGAAG......................................................................................................................................................................................CTACGGGACAGGAGCAATAATGGCTGTGCCTGCCCATGACACACGCGACTTTGAATTTGCTATGAAGTACACTATCCCAATTTCTTGGGTTGTAAGACCAGATGATAGCAATTGTGGCAATTTTGAGAAACCATATTCAGGTGAAGGATCAATGATAAATTCATCATATTCAGAGTCAGGGCTTGACATTAATGGTTTGCCTAGCAAAGAAGCTGCTTCAAGAGTCGTCCAATGGCTTGAGAAAAGTGGAAACGGGAAGAAAAAG.................................................................................................................................................................GTAAATTACAAGTTAAGGGACTGGCTTTTTGCCCGGCAACGCTATTGGGGGGAGCCTATTCCAGTTATCTTTTTGGATGACACAGGAGAAGGTATTCCAGTTCCAGAAACCGAGCTTCCTCTTACCCTTCCTGAGTTGGATGATTTCACTCCCACTGGGACTGGGGAGCCACCTCTTGCCAAAGCAGATTCTTGG.....................................................................................................................................................GTTATAACCAAAGATCCTTTATCTGAAAAACCTGCTAGGCGAGAAACAAACACCATGCCCCAGTGGGCTGGTTCTTGCTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTATCTAAGATTTATGGACCCAAAAAACTCCAGCGCATTGGTTGACAAGGCACAAGAACA...................................................................................................................................GTACTGGGGCCCTGTTGACGTGTATGTTGGGTGTGCTGAGCATGCTGNTCTTCATTTACTTTATGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U594710" ref_strand="+" ref_description="SGN-U594710 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157360436|emb|CAO69659.1| (e_value=3e-104) unnamed; (*ATH) AT4G04350.1 (e_value=1e-100)  Symbol: EMB2369 | leucyl-tRNA synthetase, putative / leucine--tRNA ligase, putative, similar to SP:P36430 Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase) (LeuRS) {Bacillus subtilis}; contains Pfam profile PF00133: tRNA synthetases class I... ; (*SWP) sp|Q2S415|SYL_SALRD (e_value=3e-83) Leucyl-tRNA synthetase OS=Salinibacter ruber (strain DSM 13855) GN=leuS; ">
      <seq>gcaaaccactgcaacttcttcactccccttctcccccatagcaatgcccatccaactccatacttctacgcgccttcatcacttgccttctcatctccttcctcgtcctcctctcctccgctctgcgcttttactccctgcctgtcgccgtcctttactgcgccgtgaattttgtaaccatgaacgcttcggagtctccaattgtacaaaaagttctagcaaaaataccgtgactgtgctagtaaatgcaattgatgggcaaaagataaatgagaaacacgagaaggtcaaaagggcttacccgtttcacgaaattgaaccaaaatggcaacattattgggaagagaataagacatttcgaacccctgatgagattgatacttccaagcccaaattctatgttcttgatatgttcccatatccaagtggagctggtttgcatgttggacatccactgggatatactgcgacagatatccttgctagatttaaacgcatgcaaggtttcaacgtattgcatccaatgggatgggatgcatttggtttacctgctgagcagtacgctattgacacaggcacacatccaaaaatcacaactttgaggaatattagtcgttttcgctcgcagcttaaatcattaggcttctcttatgattgggatcgtgagatttctacgacagaacctgattactacaaatggactcagtggatatttcttcaacttctgaagagaggactagcttatcaggctgaagtgcctgtcaattggtgtccagcacttggtactgtcttggcaaatgaagaagtaattgatggtgtaagtgaaaagaggggggcatccagtcatcaaaagccctatgcggcagtggatgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="62061" stop="53649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61762" g_stop="61337" g_length="426"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="426" r_length="426" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61336" i_stop="55417" i_length="5920">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55416" g_stop="55272" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="571" r_length="145" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55271" i_stop="55201" i_length="71">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.939" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55200" g_stop="55144" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="628" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="55143" i_stop="54428" i_length="716">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.120" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54427" g_stop="54308" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="748" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54307" i_stop="54215" i_length="93">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.963" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="54214" g_stop="54110" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="749" r_stop="854" r_length="106" r_score="0.952"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="54109" i_stop="53970" i_length="140">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.918" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="53969" g_stop="53949" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="855" r_stop="875" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-U594710" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>874</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U594710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61762" e_stop="61337"/>
          <exon e_start="55416" e_stop="55272"/>
          <exon e_start="55200" e_stop="55144"/>
          <exon e_start="54427" e_stop="54308"/>
          <exon e_start="54214" e_stop="54110"/>
          <exon e_start="53969" e_stop="53949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAACCACTGCAACTTCTTCACTCCCCTTCTCCCCCATAGCAATGCCCATCCAACTCCATACTTCTACGCGCCTTCATCACTTGCCTTCTCATCTCCTTCCTCGTCCTCCTCTCCTCCGCTCTGCGCTTTTACTCCCTGCCTGTCGCCGTCCTTTACTGCGCCGTGAATTTTGTAACCATGAACGCTTCGGAGTCTCCAATTGTACAAAAAGTTCTAGCAAAAATACCGTGACTGTGCTAGTAAATGCAATTGATGGGCAAAAGATAAATGAGAAACACGAGAAGGTCAAAAGGGCTTACCCGTTTCACGAAATTGAACCAAAATGGCAACATTATTGGGAAGAGAATAAGACATTTCGAACCCCTGATGAGATTGATACTTCCAAGCCCAAATTCTATGTTCTTGATATGTTCCCATATCCAAGGTACGGACTTTTTTACTCCCACTCTTTCAACTTTAAATTGCTCTGTGCCAAGGATGGACTATGGAGTATCTTCTTTTAACGAGAAGGAAGCTCTATTGTTTATGGAGTTTTGATGAGAAGAAATCAACCTATTGGTAATGATGTGTTTGCTATACCTTGAAACGGAGAACTGTTAGATACCTACCAAATGAAAAGGTAAGTTCAATATAATATTATATGTAATGTTATATGTGAGTGAATGTTGGACCGTTAAAGTCTACCATATCCACAAGATGTGTTGCATGGATGAAATACTAAGATAAATAGAATGTGCAACTAGCACATATTGAGGATAAAACCAAAGAAGATCACTTGAGATGGTTGTTGCTATCCTATGTCAACCTCTAAAAGTACCGATATGTGGGTGTGAAACTATGGTGTTAAAAGGACTTTCGGACCCTAAATCACATCAAAGTGAGTTGTCTCGAAAGACGGACAATTTCTTGGAATCCATTCAAACCTAACGAAAGACATGACACCATGAAAGAGAAGATCTATATAAGTGATATTAGTTCGCAATATGGTTTAGTTTCAACTTGGTTTTACATCAGTTCAGACTCTTGCCTTGTGTATGTACACCATATTTTTAGGAAGTTCCTTTCTTGAAAATGGTAATGCTCTAAGCTTTACAGGATCATTAGACATAATTTGTATTTCATGTAGCATAAAAGTGGTTTAGTACGTTAGCAAAGACTCAAATTGATTACCTACTCCTTAGGTAGAGTAATAGAGGTTTATGTAAGGATTGTAAGGTTATTTTGAGTGAGAACCTCACATTTAGCATAAACTCTTGCTAATGGATGTGGAGAAGAAAAAGGAAAAAAAAAAGAACTTTGTATGACCAACCAAGGATGAAGTGGGGTAGTGGGGCTTGAGCTTGACTAAGGAAAGAATTAAGGAGTTGGGGGAGAAGTTAATGGTTATGGAGGCCTAGGAGAGTAATCGGATGCAGATAATATGTGGACAAGGAGAACTGATAATATAAGGGAGGCAATTGGAGAGGTGTTAGGAGTCGCGAAGGGTAACTTTAGGGGACCCAAGTGGTCTGATGGTGGGATGGAGAGGTCTAGGGGAAAGTGGAACCCAATAAGGTTGCTTACGTGAAGTTGGTGGAGAGCAAGAATAAAGATGCATAGAGGACTAACAAAGAGAGGTATAAGATTGTGAAAAAGAAAGCGCGGATGACGATTACAACGGTTAAAACAATAACATTAAACACTTGCATGGAGAAAAGAGGACAAAAGTGGTGCATTAAAGACAAGAATGACAATGTACTGGTGGAAGAGGCCCTCATTAAATAAAATGGCAGACGTACTTCAAAAACTCTTAAATGAGTGATTTAGAGAACACCAAAAGTAGTCAAGATTTTGGGTATTGTAAGGTATGTTAAATTTGAGAAGGTTAAAGAGGGAAATTTGTAATATAAGAGGAGGACAATGATTGGGTTAGATGAATTTCTTGCGGCATTATGGAAGAGGGCAAGCAAAGTGGGTTTGGAGTGACTACTTTTGTAGTTTAATGTCATTTGTTGGATGACTAAGATCTCATTTGTTTGTACTTAATGGAGGTCTGTATCTTAATTATTCAGATTCAGCCCATTAAGTGTGTTTGATTTTAAGGTCTGAAACTAAATGATTCAGATTCATCTCATTAAGTCCATTTGTTTCTTTCCTCAAAAGGTCTCTTAATGAACCTCAAAAGGTTTGAATGGACAAATCTGCAGGAGAGTCTTAACATTATTTAGACTTATTTCATTAGTCATAAAATAATAATGTATCGTGTCTCTCGGTCTTTGCGTAACTTTTGCTCTCACAACTACAAACTTTCTTCATTTTTTTCAATCAAACACCAATTTTTTTCTCTTGAATTGGTAAAATAATAATGTTTTTGAGTTATTGATTTTAAAAATAGTGCACCTACATTTAAAAAAATATATGCAAAAATTAGATGGACTTGGATGAGAAGAGTCATTATACAATACATATGTTAATATATTTTGTCAAAGTGTCCACTACAAAAAAACATGAATGACGTTAGATAAGGATTCTTTAGTTTTTCTTATTAGCCAAAATATATGTTAATCGCTGATAATGTGATACCTTATTTATTATTTTGAACTTTTTGATATTATATTGTGCCTATAAAATATTTTTTATTAGTGATTTTTTTATGTTATGCTTGATGATCATGATATTGTTTTAAATAAAAAAGTAATATTTTCATTGAAATGATTTTTTTATAACATTTTATTAACATAATGTTTGATTTCATATGCACATTCAGATATTGAAACAAACTGTAATCATTCTGGGTTCAAATACGGAGACCACATATTAATATTCTGATGTGTATTCATATCTAAACACCTAGCCCTTAATGCAAATCTTAATATTCAGACGTGTATTCAAATTCAGAGGTTTTAATCTCAATGAAAACAGATGAGGCCTAAGATGCCCATAGAATGAAAGTGGAGTGTAGTGATCCCATTGTACATGAACAAAGGTGATACTCAAAACTGCAATAACTATAGAGGTTTCAAATTACTAATCCACACTATGAAAGTTTGGGCGACATTCAAAATTGCTACAATTATAGAGAATCGTACAAGAGCAAGCATGATATTCAAAATTGCAACAATTGTATGAGTATCAAACTACTAAGCTGCACTATGAAACTTTAGGAGGAATGTGTTTTATTATTAGGTTCAATTTGATTCATGTTGAGGTTATACCATCTACTTTTTAAGGAGATTGTTAGAGTAGTACAAGGAGAAAAAACTAACTTATATATGGTCAGTGTTGTGAAAGGCGCTCGCCATAGCGCCTTTGGCGAATGGCGAGGCGAGGCGAGGCTGTGTTGCCATTATCCACTGAGGCGAGGCGACCTCAAATAGGCGACCCGAGGCGACGTAAATGGCGTCGCCATTTTGATTTATTTTTTTTAAAAAAGTTTTAACTTCATAATATTGGTTTTTTTTTCTATTTTCAAACTTTCATCAGACTTTCGTGTATTCCTCTTCTTCTCTTCCTCGAGTCGCTGCTGCTTCTTCTCTTCCTCAGTCGCTTCTCTCTTCTTCTCTTTCTCAGTCGCTGCTCTCTTCTTCGTCTCTTTCCCTCGAGTTGTTGCTCCATTTTTCTCTTTCTCTTTCACTCTTCATTGCTCCCTGCCTTCACTACTCTTTTTTCCCCTCTGTTTTCTTTACTCTCTGTTTTGTCCCGGATTACTGTAAAATGTTTTCTGCTTTCACTGTGTTGTGACCGTTGTCCATTATTTTTTTGAAAAAACATTAATTCTTCTATAGTAATTATTATAGTATTTGTAATATATGTAATTGCTATTGAAATTTTGAATATTATATGTGCAATTAAATGTTTTAAATTTTTGGTATTAATTGGCGCCTCGATTCAAAAAGGCGAGCGTGGCGAGGCAGACCCTTGTCGCCTCTCGCGGTCCAAAACACTGTATATGGTGTTCATCATAGAAAAGACATAAGATAGAATTATGAGGGAGGTTTCATAAAGATGCTTGAATTTTAGAATTATAACTACACCACATATGATTAAGGACATGTACAACATAATCAAGATTGTCGAGGATAGTGAGAAAAGACTAAGAACACTTTTCGGTCAAGATGGGTCTGCACTAATGGTCAACTCAGCCTTTTTTTCATTGTCTTGGTGATAGATGAACTGACACGACATATTCAAGAGGAAGTACCACGGTGTATGTTATTTGCAAATGACATAGTATTGGTCGACAAGACACACGACAAAATTAACAGTCACTCGAGATTATGGAGACACACCCTAGAGTCTAAAGGCTTCAGATGTGAAGGACTAAAGTAGAGTACATATAGTGTAAGTTCAATGTCATATCACATGAGGCAGATGGGGAAGTGAGTATTGATACACAAGTCATCCCCCAAGAGAGGAGATGGAGATTGACAAGGATGTCATTATATTTGAATGAGATAAAGGAAATGGAGGCTCACATCAGTGTCCAATGTTATAAGACTGCATGACCTGCTGTTTGGGGTGGAGTGTTGGTTAGTCAAGAACTTGCAAGTTGAGAAAACGAATGTAGTAGGAATGAGAATGCTTAGATGGATGTGTGAGCATACTAGAAGAGACAAAATTAGGAAAGAAGATGTACGAGGCAAAGTGGAAACACAAACCACTCTTTGACAGCTATGTGGCCTTGGAAACTAATCTCAAGGTGAAGATACCACAGAAAGTATCATGCTTTGTGTGGTTGGTGATTAGAAGAGCCTGTTTGACCCATGAAGTCTTACAGAGAAGAGGTATATGGATATGCCCAAGGTGTTACATGTGTGGACAAGAGGCTGAGGTAAATGGTCACCTAATTCTGCACTACAAAACAACTACAAATCTGTGGAACATGTTCTTACATATACTTAGGGTGAACTGGATAAGGTGCAGTACCACTTCTGAGGTACTGGTTCATTGGCAAGAAATAGGGAATCAAGGATCAAAGGAAGATTGGTGTAAGGGTATCCCAGCCTGCATCTGGTGGACATTGCGAAAGGAAAGAGATAAGAGATACTATAAAGGGAAAGCTAGCAACATCCAGAAGATCAAGATGAGATGTCTTAGTCCTCTATACTTTTGGTGTAAACAGTATACAGTTGGGAGATAGTTTAGTGGAATTCATAGGCAAATTGTAAAAATTGAAAGTAGATTTTTTTTATGTTACCTCCTGGGTGTTTGTAAATCCTACTTCATCAGTTTCTGATGAGTTTTTTGTGTGAATACAAAAGTTACCTAAAGAACTATATATTGCTATAGTATCAAACCAACCCAGTCGAAGGATCAACACCAGAAGAGAAATAACTTTACTAGCTTAAAGCTCCAAATGGTAAAACGAGAATGTATATCTTATCTCATTTGCCACTTCCAATTCTATGCTTGGGCTTCTATATCAAGTATCAAATCACTCGTGTATAGCATGAGGTGCACAGGAAAAATTTCAAGAACCTAGTTTAACCACCATCTTGTTGCAGAAGCACAAATTATGTTTAAGTAAAAAACAGCACCCCAAAATTTATGTGAACTTGCAAGAATAAACACTTGAAGGCACTCCTTCGAACAACCAAGAGTCCTGGCTTACATCCAATTTGATCAGTTTTAAGAACTAAATAAGACCAAATAATCTTTTGAAAATGAATTTTAAATATCTAAAAAATCATGTATGGAAATCAGTAAATTGCACATATTGACAAAAATGTATTTCTGTTCCAAAAAATATAAGTACTGCCATTGGATATAGTGAAACAACTCTTTCTTGGACTCTGTTTTTTGGTTTTTCCAAGTACTTCGAAATATTATTGTAAAGAAATAGATCTTGGGCTTAGCTCAACCCAAAAATAGCTCATGAGGTGAGGATTGCCCAAAATCATACAAGAAAACCAATTGCCCATCCCATAACCAATGTGAAACTTTTAACCCTCCCTCCTCCCTCCTCGCAGTATAAGACTGAACATCTAGAGCATGGGCTATACAATATGGACAGATCACGGATGCTATTTTGATAGCAAATGAATGTGTGGTACAAGGAAGAAAAGCAGGAGGATATGAATATTATACGAGCTAGACATAGAGGCCTATGACCTCTCAACTTGGAAATTCTATGGAAGACATGGGAGAAAAAGGGCTTTGGCAGCAGATGGATAGCTGGATCAAGTGCCCATTTTAGAAAAGGTTTTCGTAGAAGTGTTCTGCCCATGTTCAAAATTTGCAGTCAGTTATTTAAAAGAGTTTTATGGTGGATAGTTGCCAATCCATTGTGAGCTATGGCAATTGCCTTTGTAATCAATTGATCGCAACCTGCTAAATTTGCTTTGGTGCTTTATTCATCCATGCAGTGGAGCTGGTTTGCATGTTGGACATCCACTGGGATATACTGCGACAGATATCCTTGCTAGATTTAAACGCATGCAAGGTTTCAACGTATTGCATCCAATGGGATGGGATGCATTTGGTTTACCTGCTGAGCAGTACGCTATTGACGTAAGTTTGCATAAGTCACTGCTTTTAATTTAATATTGCAGGTATCTAAGTTTTTACCTTTCCTTTGACAGACAGGCACACATCCAAAAATCACAACTTTGAGGAATATTAGTCGTTTTCGCTCGCAGGTAACTTTCTTTTCTTTTGATGACTATATTCCGTGTTTACATTGAGGCTTTTAATCCTTTCCAAAAATTCTGAATTTTTAGCCATGAAATCAAAACCCTAAGTTTGTTATTTGCATTCCTAGTTCAAGAATCAAGTGTTCATTTAGGTGACAGTAGACTTTGAGCTACTTTTTGTATGTATGTGTGATGTTTCAGTTTAATTGAGACTTGGCAAATCCACAGAATATCTGTTTTTCATTTGGCAGAGCACTGAAGGAGAATTTAGCCTTTTCATGATAGTGTAATTCGTACATGGTTTTTAAGGTCTGAAACAGTAAAAAGTCCTCTATCAAAGTAACTATTCAGGTGAACCATCATTCGTAAATTCAGGTCTTGGTCACTTGGCCCTGTTTTTTTAAAAATGATAGCAACTACATATTTTGCAACTCTCCATCCATGAGCCTGCTGTCTTGCCCACCATCTGTTAGTTCTGTTACTTTTCCTCCAATTCCTTGCTGGTTCAATTTCAGCTGATATTTGTATGTCCATATGCTCTAATACCTGTAAGAAAAGGACGGTTTCCCTGCAAAACTCAGGGCATTTAAATAGTCATTGTTGGAGTTTATGTGCTAATCTATGTAACAAGAATGTTTCATGATTTGATCTTTTGCTATCCTTCATAGTATAGAATGGTGCTTCAAAAATATCACTTTGCTAATATCTATATTGATTTCTAGCTTAAATCATTAGGCTTCTCTTATGATTGGGATCGTGAGATTTCTACGACAGAACCTGATTACTACAAATGGACTCAGTGGATATTTCTTCAACTTCTGAAGAGAGGACTAGCTTATCAGGTTTGAAGTTTTCTGAATTTCATTTTTATTATGGCAATGGTAGGTTGAAGTGACCCTCTTCGACTTATCAATGTTCTTTGAATCCAATATTAGGCTGAAGTGCCTGTCAATTGGTGTCCAGCACTTGGTACTGTCTTGGCAAATGAAGAAGTAATTGATGGTGTAAGTG-AAAGAGGGGGGCATCCAGTCATCAGAAAGGTAAGCTTTCAAATACCATGTTACATTTTGAGGTAGGAAATTTCAAAAGAACCGTACTTCTGTTTACTCAATGTCTAGTCCTTATTTTCATTGCCTGGATGGTTTCATGATTTTACAGTACATTGTTTATTGCCAAGCAGCCTATGCGGCAGTGGATGTTG</genome_strand>
        <mrna_strand>GCAAACCACTGCAACTTCTTCACTCCCCTTCTCCCCCATAGCAATGCCCATCCAACTCCATACTTCTACGCGCCTTCATCACTTGCCTTCTCATCTCCTTCCTCGTCCTCCTCTCCTCCGCTCTGCGCTTTTACTCCCTGCCTGTCGCCGTCCTTTACTGCGCCGTGAATTTTGTAACCATGAACGCTTCGGAGTCTCCAATTGTACAAAAAGTTCTAGCAAAAATACCGTGACTGTGCTAGTAAATGCAATTGATGGGCAAAAGATAAATGAGAAACACGAGAAGGTCAAAAGGGCTTACCCGTTTCACGAAATTGAACCAAAATGGCAACATTATTGGGAAGAGAATAAGACATTTCGAACCCCTGATGAGATTGATACTTCCAAGCCCAAATTCTATGTTCTTGATATGTTCCCATATCCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGCTGGTTTGCATGTTGGACATCCACTGGGATATACTGCGACAGATATCCTTGCTAGATTTAAACGCATGCAAGGTTTCAACGTATTGCATCCAATGGGATGGGATGCATTTGGTTTACCTGCTGAGCAGTACGCTATTGAC.......................................................................ACAGGCACACATCCAAAAATCACAACTTTGAGGAATATTAGTCGTTTTCGCTCGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAAATCATTAGGCTTCTCTTATGATTGGGATCGTGAGATTTCTACGACAGAACCTGATTACTACAAATGGACTCAGTGGATATTTCTTCAACTTCTGAAGAGAGGACTAGCTTATCAG.............................................................................................GCTGAAGTGCCTGTCAATTGGTGTCCAGCACTTGGTACTGTCTTGGCAAATGAAGAAGTAATTGATGGTGTAAGTGAAAAGAGGGGGGCATCCAGTCATCAAAAGC............................................................................................................................................CCTATGCGGCAGTGGATGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U579714" ref_strand="+" ref_description="SGN-U579714 Tomato 200607#2 [19 ESTs aligned] (*GB) gi|15220761|ref|NP_176421.1| (e_value=9e-63) expressed protein [Arabidopsis thaliana]; (*ATH) AT1G62310.1 (e_value=4e-65) | Symbol: None | transcription factor jumonji (jmjC) domain-containing protein, similar to nuclear protein 5qNCA (Homo sapiens) GI:13161188; contains Pfam profile PF02373: jmjC domain | chr1:23039704-23042966 REVERSE | Aliases: F24O1.3, F24O1_3; (*SWP) sp|Q6ZPY7|JHD2B_MOUSE (e_value=3e-21) JmjC domain-containing histone demethylation protein 2B OS=Mus musculus GN=Jmjd1b; ">
      <seq>tggtgattcctcatatgggaaaagggggtggggggcttagaaggagggttttgaagcaacttttccttatcaaaaaatactcaaagatggatctagaatttgaagttaatttgtaaaattttattagattggtgtggatttttggatggattgggggatttgaatgaagttgagaacaaaaaggatgaaaggatcaaaaaacatgggtatggaagaattggaagggcttattctttcatggcaacaatggtgaagagggcctaagctgcaagaaatatgtatcaaaattgtccttggcctaacacctaaaagaacacacaaggacaatagcaataaccaaatactaactgctactgctgccaaagaaagtactgctatttctctaagctatgtatgtgagctgctccaaatctgtgacaacttggttgattgcatgaaggaccatcttctttatctgttacaccagaggatgaaacaagtcagtaagaaatggaggcttgtcttaacatagtcagattaaaataaagcattttttatatggcacctctagtttgtcttctctggccttgtggcctttcggcaatgtcctgaactcagctgtgaggcggaaacattctcgaatgttttcaggagaaacaaaatcagcagcaactttggtacacgactggaaagttgaaaacagatggttggttacttgatgaactttatcatctggattttcatggattatttaagtattgattcttaccttgagattacgcacttggtgagggcatcctgcaggaatgaaaactgactctccaagtctttgctcaaatgtccaaggttcaatccctaaaatagtaagcgtgcacatcttgagtttattaaataaaatgtgatccttgttattgaggaaagataacgaacagggtaaattactaaccgaattcttccttcagttttctcttgtgctccaaagttaagtagaagctctggtcatggattggatgaaaaacctgatcaaccggacaacagaaagtgtgcctaaattcctttgcatgctttaaaagatactcactcaacttgggtacatcttcccttctgaaaatgtcccacaatgcacctccagttgtctctgaatcatcaaaggttttctcctccctgctaatgtcactagacatcttcataggatatttatcagcctcgcattcgatgcgctctctttcatcctgagctctatgcatctgtttcactatttcaattgccgaccgctgctcatcagttatagccatctctgctgtgtgtgtcaaaatatttatctgagcaattcaaaattttaaaatattagcttgtcatgaaataagcctgaaaaagtaatggttgcagtctttgcaggcttcatcatggacagaatacagaactgggaaaagcagtaaactgctaccaaggtgagaataaacattaaactagattgtggtatgtggattaatttaccgggaatgtgacaattgtcgaacatattgtataggactggccataaggcagaagagattggacgaatgtggttctatatatttgaaataaaattttagttttttttgctcatttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="63073" stop="68874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63371" g_stop="63610" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="240" r_length="240" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63611" i_stop="67221" i_length="3611">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67222" g_stop="68573" g_length="1352"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="1592" r_length="1352" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-U579714" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1592</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U579714" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63371" e_stop="63610"/>
          <exon e_start="67222" e_stop="68573"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTGATTCCTCATATGGGAAAAGGGGGTGGGGGGCTTAGAAGGAGGGTTTTGAAGCAACTTTTCCTTATCAAAAAATACTCAAAGATGGATCTAGAATTTGAAGTTAATTTGTAAAATTTTATTAGATTGGTGTGGATTTTTGGATGGATTGGGGGATTTGAATGAAGTTGAGAACAAAAAGGATGAAAGGATCAAAAAACATGGGTATGGAAGAATTGGAAGGGCTTATTCTTTCATGGTAAGTACTTTGTGCAAGTGTATTTTGTTGTTTTCAAATTTGACTAGCTCTTTGCAAGGTTTGCATTGTGTTTTGAAATTGTTTGTTAGTTGGCTATATAGCTTTGATTCCCAAAGACAATTGTGTTATATGAGTCTAGTTCTCGTAGAAGTTGCATCTTTACTAATTTCTTTGTTGTTTGGATTTGGATTAGTAACGTATTTAGATGCCTCCATATTGTTGGGAAGTTGTTCTCATCGCTTTTCAAACTCTAGCTTGGGCGGTCGAGTTATTGGGAGACATTTCACAAATAGGATAGGTGGTTAAATTGATTGACAAAGACTTGTTGTGGGGTGAGTGTTTGACCGAGCAGATTGAATATGAAAATTTTGATCACATATCGAATAAATTACAATCCAAAAAGATTTCAATGGAATGGATATTTAAAGTTCGATTTTGGATTGATTGATTTGGATGTTTTGGATTTGATTTTTGAGCGTTTAAGCCCGTTCATAACAACTAACTATTCCAATTCACCTAATATATTTTGCTTTTTAATTGTGATCACCTTGTTGATCATGTTGTCTAATTAGAGAGCGTGTGAGTCAGGTTTAGGAGTTTGAGGTTCTAAATTTTAAGATAGAAGAAATGAGTTTGGGGAATCTAAATTCTTGGATAGACGAGATGATGCTTCCTTTTTTTAAAAAAAGAGAAACTTTTGTTGATGGTATTGTTAAATCCACAACGTTAGTGTTTCCATGATGCCATCTTTACCACTGAGTTATCAATCAATTTTATTAGGGATTCACAAGTTATTGAATTTGCTTGAATTCATGAACCCCCACTTAGCTTATCACTGTGTCATCAATCAATTTTATTAGAAATTCACAAGTTATATATTATTCTCTAATGCAAATATAGAATCTAGAAAATGTTATTGAATTTGTCTGAACTTACCAACCTTCACTTAGCTTACCACTATGTCATGAATTAATTTTATTAGAAATTCACATGTTATATATAATTTTCTAATGCAAATACAGAGTCTATGAGAAAGTTACTAAATATGTTTGAATCTATGAATCATCACTTAGCTTTGTTTCTGCACGTAATTTCATATTGAACCTAATAATATAATGAGTTGCACATGTACCATTGGTAGGGTTGAATATAGGGTGGATCTAATGATTCAACCTAGTGATCTATTAAGTGGATTGAGAACCACGAGACTTAAAATTTAAGTTCTAGCGGAGAAAAAAATAGTAGGTGATTTCTTCTCATAAGCCTATTTGTGTTTGGTTGATACATATTGTGGAAGTGTTAGCTAGCATAAATGAGGATGTTTAAATAAATATAAGTGCATATTATGAAAGATAGGATTAGAAAAGAAACTATTCAAGAAAAGATAGGAATGATATCTGTAATAGACAAGATGAGTGATGTAACACTAAATGGTTTGGACATGAAGAATTGGCACTTCTTAGTGAACATTGGGATGCTTAAATGAATTTATGCACATATTAGGGGAGATAAGATAAGAAAAGAAACTATTTGGGATAATGTAGAGTGAGTGGCCTTGCAATGGACAAAATGAGTGAGATGACACTAAGATGATTTTGGATATATGAGGAATAAATGCTCCAACAAAAGGTGTGGTAGGCAAAAAAGTCTTGGATTAAGGTTATTAGACATGAATCACATGATTTGACACATATGTGGCTTATCAAATACAAGATTATGGATAGGAAGATATGAAGATTGACGATTAAGATTGATAGATTTTTATGTAGTTGAGGTTTGTTTGGTTCCCGGATAATTATTACTATTGTTATCTTCTCCTGGTTTTATTCTTTGGTTTTTGTGTTACCCATTGTTTATTATTGCTTCTTATTTTTTTCTTAGTTGTTTTCAACACATCTTCGTTATTATATTAGTTTTAATTTTTTATATATATTTTTTTAACTTGAGTCGAGGATCTATTGATTCAACATCAATATCTTCACAAGATGAGGTTAGATGTTTACACATCCTCTTTTCAAAACCTCATTATGGAATAACTAAAGAGGTCATTTGATAGGGTGTATACGAATATTGTTAAATAAAGTTAAATAGAGTGTACTAGTGATGTTTGCATTAGTTATGTTGAGATCATTATTTATGTATTGTTTGTTTTTTGGTGTATTAAAATAACATGGTGAAATTAAATTCTCCGTGAAGATGCAGAGTACCAACGACTAGATGATAAGACCTTGTGGACCTTAATTATAGCTTCGTAGTGACGACCTTAATTGAATATGTAGGATAGGTGGTAAGTGATGACACACAACGACCAATCCTTAAAGACCATTCTTTCTTTTAAGGATGCCTAATTGCCACATCGATCATTTAGGGAGAGGCGGGACACTGCGAGGTGGGTAATTTATTTGAGGTGAATGCTTCTTAAAGAGTGACGGGGGTGTGCGAAGGTAGGCTCAAGCTAAGATTCTGCTCATGAGCTTAATGATATAAGTCTGTAAAATCTGAAATCGACTGGTCGACAGAGATATAAGTCGGTCATAATCGAAGTATATTGTTGTTGTTGACGCGTGTACATCTTAGTTTTAGTGCACTAAATTGATTTGAAAAAATGACCAATTTTAGAGCGATAATTCAATTAATGCTTCAAATTCTATAGGACATGCATGGTTGTTTAGTTTGAAGACATCTTATTTTAAGATTAGATATGTTAGAAATAATTATCTTAGTACTTTAAGTAAATGCTTGGTTTGTTATATTAAAAATGATATGAATTGCGTAATTTCTAAAAATAAATTTGTTTAAGAATGTGTAAAATAATTATAAAGAGGTTTTATTGGGATATTATGTCACTTTAACTATTTTGTCTTAGGATTAGTTATTTCAAGACTCTTATTTCATCTAGAAACAGTAACAACTTATTTGAGTACTGATTATTAATACTATATAATAAGATATCACAAACTTCATAACCAAACAAGAGATCAATGGATACTAAAAATTTACCTCAAAAATTGTCTCATTTTATCTCACCAAACGTCTCCACACTATTTTACGATAAAATAACAATAATTTAGTTTGTGTCAAAACCCTGAATGAATGTGATCTAATAGTTGTCGAATTCACAATGTTGATCTAGAACATGCGCATTTAGTGCTGTTTCATTAATAATGATGATACAGTTACGATTAGTATAATATGTGATTTAAGTGTGTATAAGCAACGGTAATTTGCAGATAAAAATTTACTCATATTCGGTATTGACCCGTAGTTAATCAATCCATACACGTTTGTACTTTAGCTTTTTGCATGATTATAACATACAATTTACCTCGTGAAATCACTTAATTAATACTAAAATACATTTGATTTGGTATAAACTCCCTTTGCATTAGTTTCACATTTTTCTATCTAGAAATCATTTAATACCAATCAAATTCTAAATCCCTGTTAGGCTTAAAGAGTACTATAGAAAGTATTTGCATGAAATTTCACATTGTATTCCATTATGTAATCAAATGCAAAGGTTACGAGTCTCTGTATAGGAGAAGCTGCCTTTATTGCAGGAAAAGTATGATCTAAAAAAGAATGTTCCTTTAACATTTACTTTTCTACAGGCAACAATGGTGAAGAGGGCCTAAGCTGCAAGAAATATGTATCAAAATTGTCCTTGGCCTAACACCTAAAAGAACACACAAGGACAATAGCAATAACCAAATACTAACTGCTACTGCTGCCAAAGAAAGTACTGCTATTTCTCTAAGCTATGTATGTGAGCTGCTCCAAATCTGTGACAACTTGGTTGATTGCATGAAGGACCATCTTCTTTATCTGTTACACCAGAGGATGAAACAAGTCAGTAAGAAATGGAGGCTTGTCTTAACATAGTCAGATTAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGTGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTTAAGTATTGATTCTTACCTTGAGATTACGCACTTGGTGAGGGCATCCTGCAGGAATGAAAACTGACTCTCCAAGTCTTTGCTCAAATGTCCAAGGTTCAATCCCTAAAATAGTAAGCGTGCACATCTTGAGTTTATTAAATAAAATGTGATCCTTGTTATTGAGGAAAGATAACGAACAGGGTAAATTACTAACCGAATTCTTCCTTCAGTTTTCTCTTGTGCTCCAAAGTTAAGTAGAAGCTCTGGTCATGGATTGGATGAAAAACCTGATCAACCGGACAACAGAAAGTGTGCCTAAATTCCTTTGCATGCTTTAAAAGATACTCACTCAACTTGGGTACATCTTCCCTTCTGAAAATGTCCCACAATGCACCTCCAGTTGTCTCTGAATCATCAAAGGTTTTCTCCTCCCTGCTAATGTCACTAGACATCTTCATAGGATATTTATCAGCCTCGCATTCGATGCGCTCTCTTTCATCCTGAGCTCTATGCATCTGTTTCACTATTTCAATTGCCGACCGCTGCTCATCAGTTATAGCCATCTCTGCTGTGTGTGTCAAAATATTTATCTGAGCAATTCAAAATTTTAAAATATTAGCTTGTCATGAAATAAGCCTGAAAAAGTAATGGTTGCAGTCTTTGCAGGCTTCATCATGGACAGAATACAGAACTGGGAAAAGCAGTAAACTGCTACCAAGGTGAGAATAAACATTAAACTAGATTGTGGTATGTGGATTAATTTACCGGGAATGTGACAATTGTCGAACATATTGTATAGGACTGGCCATAAGGCAGAAGAGATTGGACGAATGTGGTTCTATATATTTGAAATAAAATTTTAGTTTTTTTTGCTCATTTTG</genome_strand>
        <mrna_strand>TGGTGATTCCTCATATGGGAAAAGGGGGTGGGGGGCTTAGAAGGAGGGTTTTGAAGCAACTTTTCCTTATCAAAAAATACTCAAAGATGGATCTAGAATTTGAAGTTAATTTGTAAAATTTTATTAGATTGGTGTGGATTTTTGGATGGATTGGGGGATTTGAATGAAGTTGAGAACAAAAAGGATGAAAGGATCAAAAAACATGGGTATGGAAGAATTGGAAGGGCTTATTCTTTCATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAATGGTGAAGAGGGCCTAAGCTGCAAGAAATATGTATCAAAATTGTCCTTGGCCTAACACCTAAAAGAACACACAAGGACAATAGCAATAACCAAATACTAACTGCTACTGCTGCCAAAGAAAGTACTGCTATTTCTCTAAGCTATGTATGTGAGCTGCTCCAAATCTGTGACAACTTGGTTGATTGCATGAAGGACCATCTTCTTTATCTGTTACACCAGAGGATGAAACAAGTCAGTAAGAAATGGAGGCTTGTCTTAACATAGTCAGATTAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGTGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTTAAGTATTGATTCTTACCTTGAGATTACGCACTTGGTGAGGGCATCCTGCAGGAATGAAAACTGACTCTCCAAGTCTTTGCTCAAATGTCCAAGGTTCAATCCCTAAAATAGTAAGCGTGCACATCTTGAGTTTATTAAATAAAATGTGATCCTTGTTATTGAGGAAAGATAACGAACAGGGTAAATTACTAACCGAATTCTTCCTTCAGTTTTCTCTTGTGCTCCAAAGTTAAGTAGAAGCTCTGGTCATGGATTGGATGAAAAACCTGATCAACCGGACAACAGAAAGTGTGCCTAAATTCCTTTGCATGCTTTAAAAGATACTCACTCAACTTGGGTACATCTTCCCTTCTGAAAATGTCCCACAATGCACCTCCAGTTGTCTCTGAATCATCAAAGGTTTTCTCCTCCCTGCTAATGTCACTAGACATCTTCATAGGATATTTATCAGCCTCGCATTCGATGCGCTCTCTTTCATCCTGAGCTCTATGCATCTGTTTCACTATTTCAATTGCCGACCGCTGCTCATCAGTTATAGCCATCTCTGCTGTGTGTGTCAAAATATTTATCTGAGCAATTCAAAATTTTAAAATATTAGCTTGTCATGAAATAAGCCTGAAAAAGTAATGGTTGCAGTCTTTGCAGGCTTCATCATGGACAGAATACAGAACTGGGAAAAGCAGTAAACTGCTACCAAGGTGAGAATAAACATTAAACTAGATTGTGGTATGTGGATTAATTTACCGGGAATGTGACAATTGTCGAACATATTGTATAGGACTGGCCATAAGGCAGAAGAGATTGGACGAATGTGGTTCTATATATTTGAAATAAAATTTTAGTTTTTTTTGCTCATTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581486" ref_strand="+" ref_description="SGN-U581486 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157360437|emb|CAO69660.1| (e_value=1e-98) unnamed; (*ATH) AT1G11950.1 (e_value=2e-97) | Symbol: None | transcription factor jumonji (jmjC) domain-containing protein, contains Pfam domain, PF02373: jmjC domain; non-consensus TG acceptor splice site at exon boundary 79262 | chr1:4034585-4038308 REVERSE | Aliases: F12F1.18, F12F1_18; (*SWP) sp|Q6IRB8|JD2AA_XENLA (e_value=6e-43) JmjC domain-containing histone demethylation protein 2A-A OS=Xenopus laevis GN=jmjd1a-A; ">
      <seq>ggttaaattaccggctggagtcataaaaccagatttgggtccaaagacatacattgcttatggtctcagcgaggaacttgggagaggggattcagtgacaaagcttcactgtgatatgtcagatgcgataaatattttgacacacacagcagagatggctataactgatgagcagcggtcggcaattgaaatagtgaaacagatgcatagagctcaggatgaaagagagcgcatcgaatgcgaggctgataaatatcctatgaagatgtctagtgacattagcagggaggagaaaacctttgatgattcagagacaactggaggtgcattgtgggacattttcagaagggaagatgtacccaagttgagtgagtatcttttaaagcatgcaaaggaatttaggcacactttctgttgtccggttgatcaggtttttcatccaatccatgaccagagcttctacttaactttggagcacaagagaaaactgaaggaagaattcgggattgaaccttggacatttgagcaaagacttggagagtcagttttcattcctgcaggatgccctcaccaagtgcgtaatctcaagtcgtgtaccaaagttgctgctgattttgtttctcctgaaaacattcgagaatgtttccgcctcacagctgagttcaggacattgccgaaaggccacaaggccagagaagacaaactagagataaagaagatggtccttcatgcaatcaaccaagttgtcacagatttggagcagctcacatacatagcttagagaaatagcagtactttctttggcagcagtagcagttagtatttggttattgctattgtccttgtgtgttcttttaagtggtaagccaaggacaattttgatacatatttcttgcagcttangccctcttcaccattgttgcctgtagaaaagtaaatgttaaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="69190" stop="66898"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68891" g_stop="68765" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68764" i_stop="68283" i_length="482">
            <donor d_prob="0.920" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68282" g_stop="67907" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="503" r_length="376" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="67906" i_stop="67816" i_length="91">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.821" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="67815" g_stop="67730" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="504" r_stop="589" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="67729" i_stop="67646" i_length="84">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.348" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="67645" g_stop="67526" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="709" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="67525" i_stop="67436" i_length="90">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.926" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="67435" g_stop="67198" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="710" r_stop="947" r_length="238" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-U581486" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>947</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U581486" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68891" e_stop="68765"/>
          <exon e_start="68282" e_stop="67907"/>
          <exon e_start="67815" e_stop="67730"/>
          <exon e_start="67645" e_stop="67526"/>
          <exon e_start="67435" e_stop="67198"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTAAATTACCGGCTGGAGTCATAAAACCAGATTTGGGTCCAAAGACATACATTGCTTATGGTCTCAGCGAGGAACTTGGGAGAGGGGATTCAGTGACAAAGCTTCACTGTGATATGTCAGATGCGGTATGATTTTGACAGGACTATTGTAGTTCATTCATTTGATTTCACTTTATTCTTATGTCATGTCATTGTGAATAGCCCTGGTTAATACTTGAAATCACAATTTGGAGGATATTACCTTAGCTCACATCCAAAAACTATAACCAAATCGACAAGGACCTTGGCAAGAAGGTATCTCAATTGTAGGAAAATTCCAAAATGAGCAAAAAAAACTAAAATTTTATTTCAAATATATAGAACCACATTCGTCCAATCTCTTCTGCCTTATGGCCAGTCCTATACAATATGTTCGACAATTGTCACATTCCCGGTAAATTAATCCACATACCACAATCTAGTTTAATGTTTATTCTCACCTTGGTAGCAGTTTACTGCTTTTCCCAGTTCTGTATTCTGTCCATGATGAAGCCTGCAAAGACTGCAACCATTACTTTTTCAGGCTTATTTCATGACAAGCTAATATTTTAAAATTTTGAATTGCTCAGATAAATATTTTGACACACACAGCAGAGATGGCTATAACTGATGAGCAGCGGTCGGCAATTGAAATAGTGAAACAGATGCATAGAGCTCAGGATGAAAGAGAGCGCATCGAATGCGAGGCTGATAAATATCCTATGAAGATGTCTAGTGACATTAGCAGGGAGGAGAAAACCTTTGATGATTCAGAGACAACTGGAGGTGCATTGTGGGACATTTTCAGAAGGGAAGATGTACCCAAGTTGAGTGAGTATCTTTTAAAGCATGCAAAGGAATTTAGGCACACTTTCTGTTGTCCGGTTGATCAGGTTTTTCATCCAATCCATGACCAGAGCTTCTACTTAACTTTGGAGCACAAGAGAAAACTGAAGGAAGAATTCGGTTAGTAATTTACCCTGTTCGTTATCTTTCCTCAATAACAAGGATCACATTTTATTTAATAAACTCAAGATGTGCACGCTTACTATTTTAGGGATTGAACCTTGGACATTTGAGCAAAGACTTGGAGAGTCAGTTTTCATTCCTGCAGGATGCCCTCACCAAGTGCGTAATCTCAAGGTAAGAATCAATACTTAAATAATCCATGAAAATCCAGATGATAAAGTTCATCAAGTAACCAACCATCTGTTTTCAACTTTCCAGTCGTGTACCAAAGTTGCTGCTGATTTTGTTTCTCCTGAAAACATTCGAGAATGTTTCCGCCTCACAGCTGAGTTCAGGACATTGCCGAAAGGCCACAAGGCCAGAGAAGACAAACTAGAGGTGCCATATAAAAAATGCTTTATTTTAATCTGACTATGTTAAGACAAGCCTCCATTTCTTACTGACTTGTTTCATCCTCTGGTGTAACAGATAAAGAAGATGGTCCTTCATGCAATCAACCAAGTTGTCACAGATTTGGAGCAGCTCACATACATAGCTTAGAGAAATAGCAGTACTTTCTTTGGCAGCAGTAGCAGTTAGTATTTGGTTATTGCTATTGTCCTTGTGTGTTCTTTTAGGTGTTAGGCCAAGGACAATTTTGATACATATTTCTTGCAGCTTAGGCCCTCTTCACCATTGTTGCCTGTAGAAAAGTAAATGTTAAAGG</genome_strand>
        <mrna_strand>GGTTAAATTACCGGCTGGAGTCATAAAACCAGATTTGGGTCCAAAGACATACATTGCTTATGGTCTCAGCGAGGAACTTGGGAGAGGGGATTCAGTGACAAAGCTTCACTGTGATATGTCAGATGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAATATTTTGACACACACAGCAGAGATGGCTATAACTGATGAGCAGCGGTCGGCAATTGAAATAGTGAAACAGATGCATAGAGCTCAGGATGAAAGAGAGCGCATCGAATGCGAGGCTGATAAATATCCTATGAAGATGTCTAGTGACATTAGCAGGGAGGAGAAAACCTTTGATGATTCAGAGACAACTGGAGGTGCATTGTGGGACATTTTCAGAAGGGAAGATGTACCCAAGTTGAGTGAGTATCTTTTAAAGCATGCAAAGGAATTTAGGCACACTTTCTGTTGTCCGGTTGATCAGGTTTTTCATCCAATCCATGACCAGAGCTTCTACTTAACTTTGGAGCACAAGAGAAAACTGAAGGAAGAATTCG...........................................................................................GGATTGAACCTTGGACATTTGAGCAAAGACTTGGAGAGTCAGTTTTCATTCCTGCAGGATGCCCTCACCAAGTGCGTAATCTCAAG....................................................................................TCGTGTACCAAAGTTGCTGCTGATTTTGTTTCTCCTGAAAACATTCGAGAATGTTTCCGCCTCACAGCTGAGTTCAGGACATTGCCGAAAGGCCACAAGGCCAGAGAAGACAAACTAGAG..........................................................................................ATAAAGAAGATGGTCCTTCATGCAATCAACCAAGTTGTCACAGATTTGGAGCAGCTCACATACATAGCTTAGAGAAATAGCAGTACTTTCTTTGGCAGCAGTAGCAGTTAGTATTTGGTTATTGCTATTGTCCTTGTGTGTTCTTTTAAGTGGTAAGCCAAGGACAATTTTGATACATATTTCTTGCAGCTTANGCCCTCTTCACCATTGTTGCCTGTAGAAAAGTAAATGTTAAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563766" ref_strand="+" ref_description="SGN-U563766 Tomato 200607#2 [19 ESTs aligned] (*GB) gi|157360438|emb|CAO69661.1| (e_value=0) unnamed; (*ATH) AT4G22120.2 (e_value=0) |; (*SWP) sp|Q09809|YAB9_SCHPO (e_value=1e-26) Uncharacterized membrane protein C2G11.09 OS=Schizosaccharomyces pombe GN=SPAC2G11.09; ">
      <seq>ggtgacttggtggggttttggtttattaggggttggagtttagttaaagtagaagaaaggggaaaaagtgacaactgttggcttttatggagctttgaagttattgtacttctccgatcggctattgctactctgctgctctgttatactcagcagctctgtaattggaaagagatttataatcacaactcacaatagtactagatggcgacacttggagatataggccttgcagcagcaataaatattatatctgccttgatctttcttgtggcatttgcaattttgcggctccaaccattcaatgacagagtttatttccccaaatggtatcttaaggggctgagacacagtcccacccactctggggcattcgtcgccaaatttgttaatgttgattggagagcatatataaggtttctgaactggataccagatgctctgaaaatgcctgaacctgagcttattgaccatgcagggttggactctgctgtttatttgcgcatatacttgctagggttttggactcatattgttatggcttatgccttctcattctggacctgctatgtcttaaaaactgagtatgcaaaagttgcagccatgaggttgcagtttgtcgcctctgaaaaacgtcgtcccgaccaatatacagtccttgttaggaatgttccgccagatgctgatgaatcagttagtgaatgtgtggagcactttttcctggttaaccatcaagatcattatctcatgcatcagggtgtttataatgccaacaaactggcaaaattggtgaaggagaagaagagtaagcaaaattggctcgactattaccaacttaagtactctagggatcaatcaaaacggcctatgatgaagactggtttccttggatgctttggagcaaaagtcgacgcaattgagcatcagattgctgaaattgaaagattgacaaaagagatagctgaagagaaacaaagggtagaaaaagacccaaagtctaccatgcctgcatcatttgtctccttcaaatcgcggtggggtgctgctgtttgtgcacaaacacagcaatccagaaatccaaccttgtggttgacagaatgggctccagagccacgtgatgtattttgggataacctggcaatcccctatgtttctttgacaattaggaagctcatcattgctgttgccttcttttttctgacattcttcttcatgatcccgattgcatttgtccaaacccttgccagccttgaggggattaggaagaaagcaccatttctgaaagttattattgacgaacctttcatcaaggcgttcatccaaggttttctacctgggattgctttgaagatctttctcatatttctgccaactatattgatgatgatgtccaaattcgagggctggctaagcatatcagctctagagaggaaatctgcgtctaaatactacatcttcactatcgtgaatgtgttcctcgggaacataattgcaggagctgcatttgaacaactaagtacctttctcaatcagtcggcaaaccaaatccctaaaacgattggtgtcgcagttcctatgaaagcatccttcttcataacctacataatggttgacggctgggctggtattgctggagagatcctaaggctgaagccgctaatattttaccacttgaagaactttttcttggttaagacggaaaaagatagagaagaggcaatggatcctggaagcgttggtttcaacacaggagaaccacagatacaattatatttcttattggggcttgtctatgctgtggtcacaccatttctgcttccgttcatattggtcttctttggccttgcatatgtagtatatcgtcatcagattataaatgtttacaatcaggagtacgaaagtgcagcagcattctggccagatgttcatggacgtataattttcgcactgtgcttttctcagttatctttactaggcttgctaagtacaaaacatgctactcagtcagcacctttcctgattgcccttccagtgctgaccatctcatttcacttgtactgcaaaggtcgttatgagccagctttcaccaaatatccgatacaggaagcaaggatgagagatactctggaacaagcaagggaaccaaatcttaatctgaagggctaccttcaaaatgcttatgtgcatcctgttttcaaagacgacgatgaagatgaggatgaagactttatgatgaaactggagaacgatagcgttcttgtccccacaaaacgccagtcaagaatgaatacaccagttcccagcaaagtcagcgctggctcatctccatcacttcctgatgcagttactcatgaacattaaacagcttagaatgataggttggaatatttcacctcctttgtgcatgagagttagatcgcggagactcaaccttaactaagttgtacagagagcacttcaacacatcatagttgagctggctggaccagtttacattgggacggttggcgttgaaagtacaaaaaattgtaaagagctccggtggtagcattagaagttttgtacacttaaggatgttcatatttttagcatttgctggttgttgacactcaggatataatcttgtacacgagctttctaagggaatgtatttatttttttcgttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="93989" stop="81417"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93690" g_stop="93494" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="197" r_length="197" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93493" i_stop="92676" i_length="818">
            <donor d_prob="0.919" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92675" g_stop="92355" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="518" r_length="321" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92354" i_stop="90801" i_length="1554">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="90800" g_stop="90665" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="654" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="90664" i_stop="89372" i_length="1293">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89371" g_stop="89270" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="655" r_stop="756" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="89269" i_stop="87752" i_length="1518">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="87751" g_stop="87632" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="757" r_stop="876" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="87631" i_stop="87480" i_length="152">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="87479" g_stop="87399" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="877" r_stop="957" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="87398" i_stop="86565" i_length="834">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="86564" g_stop="86224" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="958" r_stop="1298" r_length="341" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="86223" i_stop="85315" i_length="909">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="85314" g_stop="85069" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1299" r_stop="1544" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="85068" i_stop="83955" i_length="1114">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="83954" g_stop="83630" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="1545" r_stop="1869" r_length="325" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="83629" i_stop="82647" i_length="983">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.720" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="82646" g_stop="82413" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1870" r_stop="2103" r_length="234" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="82412" i_stop="82282" i_length="131">
            <donor d_prob="0.915" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="82281" g_stop="81715" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="2104" r_stop="2670" r_length="567" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-U563766" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>2670</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563766" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93690" e_stop="93494"/>
          <exon e_start="92675" e_stop="92355"/>
          <exon e_start="90800" e_stop="90665"/>
          <exon e_start="89371" e_stop="89270"/>
          <exon e_start="87751" e_stop="87632"/>
          <exon e_start="87479" e_stop="87399"/>
          <exon e_start="86564" e_stop="86224"/>
          <exon e_start="85314" e_stop="85069"/>
          <exon e_start="83954" e_stop="83630"/>
          <exon e_start="82646" e_stop="82413"/>
          <exon e_start="82281" e_stop="81715"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATAGTATGATCTTCTTTCTGCAACTGTTTTTTTTTTTAAAAAAAAGTTTTTTTTGTGTTTGAAAAGGGTTTTTGTTGATGAATTGCGGTTTTACTTTTGCTTGATTTCAGTGTCTGAATGTGTGTAAGATTTCATGTGTTTCCTAATCTCTGATTTGATTCTGCTAGTTAAGGACTTTTTTTTTTTGCCGTTTTAGGTTGCTGATTCGATTGATTTTCTACTTTTCTAATTTGTGTATTTCGAATTTCCATTTTCCCCAGATTCTCTGAGTTAAAAGAAATAGAGATGATCAGTTGTATTTTTGCGTATTTGTTTTTATCAATTAGGAGTATATGGTAATTTTGATAAGTCAAAGTAATCCAACTGAAACTTGCTTTAAAACAGTAAGCTGGTAAGAAGCAGCTGAATGTAGAAATATAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCAATAGATGTTGATACTATAAATTGTGTTTGGCAAGGGTTTATAGAAATAGAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCCATAGATGTTGATACTATAAATTATGTTTGGCAAAGGTTTATAGAAATAGAAGTTTATATTATAACAAAAGTGGAAAGGAAGCATCAGCGATTGTGTTTCATAGTGTGAGTGTTTCCCCATTTGAGAGGTTAAAACTTGCAGCATCTGTCTCGTGGTTTAATTAACCTTCGGAAGGGAGGAGTTGATGGAAGATCCGGAAGTGTATGTTTTCCTTGTCGTTTACTTGTTATCTAAGCAGGACATTGACCTTGTCTTTACAGGTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGGGTATGCTTTCTAATTATTGATATCACTTTTGGAGTGATAAGGCATATTTCTGCGATTGTTAATTGTAACCATGTTTTTAATACCATACTATTTTTCTTTGGTAAACCATGTTGATTAACATGTCGAAAATATCGTATAATTACCTTTTTTATTTTGCTTTGTCAAGTTAACTGGATTCATTTCGGATAAGAATGATTACACTGTGCATTCAATATGAAAATATCACAATAGACCCTATAAAATGAGCTGATATTTGAAAGATTCCTCATTATTTATCTTTTTATTTTTAAGTGAATGTGACTGTAAACTCAAAAAAAAACAATGAAGGTAACTGACTATATTTCTATTGGGGATCTTTGAGGTCTCATTTGATTGTATCAATAATAGGGGTTGACTTCAAACAGTGACGATAAAATGGAAAACCAAATATCTGCTGTCATAACCAGACCAGGGGACTGCTTTCAGCATGGAGTGTAGAACTTGAAACATCAATACTTTAGCTTGTTGCATCAATCTCTTGATTCACATGAAAATCCGAAAAAACCAAACATACTGGATTATCTTATCTTCTTTGTTGGCTGTTTGCGTATACTGTAAAATCAAGATAAATAGGTGGTCATGTTTTTCAAATAGTTTCTTTTTCGACTTCTTATAAGAATGGATGAGGATGATCCTTATAATAGGGGATTTAGGTGTCTTAACATTCAATTAGTCATCTATCTAATCGAGGTTCAGAAACAGGAAAAAGAATCAGCACGATAGGAATTTCAATGTTGTATACTTTAAAAGCTCCTTTATTCCTACTAAAGCATATTGCCTTCGTTGCGTTCATTCTATTTAGAGAAACTAGGTGGTCTGTGATGATTACTGCTTCTTGATTTCTGCAGGCTAAAAATCTTTGTTCCCATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCCGACTTTACTTATAGTGACATTGATAAGCTTTCCATTTCAAATGTTCCGCTTGGATCTCTCAGGTTTGGAGATTTATCTTTCAAAATTTTGAAGAATTTGATCCAGTAGATTTGCCATTACGAGATTGTTTTTTCAACATTTAAGTCTTCTTTGATGTAGGTCTTACGCCTTGAAAACTTTTGAGGTCTTCCTCTTGTTTACTTGTTTATTAATTGTTTTTAGTTTTATCATGATGCTATTTGTAGCCTGCTTTGCTTTTGCATGATCTTGACTAGATCTCTTCTTGGGCCATGAATGAAAATTCTGCAGCTAATGCTTCAAATTTTTTCAAATTTCTTGGCGAGACCACCTAGTAACTTGCAAACAAGATTTGTCTTGGACATGTTTTGAGGATCAGTCATTGAGTGGATTTGCAGTCCGTATTTAGAGTCCCAGTTCTGAGATATGTTAACCCATTTTAGATTCCAGCTTGAAAGTCCATATTTAGCATTCAAGTGAAGTTATCTACTAGGAAAATGGCAATACCCCTTTGCTTACCTTAAAACTCCATATTGTAATTCGTATTGACCTGGATTTTTGCAGGTTTTGGACTCATATTGTTATGGCTTATGCCTTCTCATTCTGGACCTGCTATGTCTTAAAAACTGAGTATGCAAAAGTTGCAGCCATGAGGTTGCAGTTTGTCGCCTCTGAAAAACGTCGTCCCGACCAATATACAGTACGTATCAACTTACTTTTTGAAATTGAACATCTAAATTCTTCTGTGTTTTAACAAATTTAGTTTCTGGAAAATGTATTTAATCACTGAAGCATTTGTTCTCTGCAAATGCATTATGTTTTTCCAAAGTTGATAGACAGATATTGAAGCTGACAAGGCATATCTCCTTAACTGTTCAAACTTAAGAGAGTAGTAAAGTTCCTAAGTTTCTGCTTTCTTGTTTGTGTTTGAAATTTGCAATCTTAATTTTCTCATGGTTTGCGTGATTTGGTGGCTAATCTATGGATAAATTATCTGATGAATTTCTGGAAGGCAGTGAACAGATGACAACTTCATCTTTTACCTTGTCTTTCCATAGGTGGACTGAAACATTGGTTCCTCTTGAAATCCTTTGCAATAATTCTTTATGCATTTGATTAGTTTGAAGCAATAAATTAGTCTGTAATTTCTCCAATTAAGTGGTCAATATATTTAGAACTACTTTGCCCATTTTTTATTTTTTTTTTGTGCGTGTGAGAGATTGTGATAGCCATAAACAGAATTAGAACTGAAAATTTTAATTTCTTTTTACCTCTTTCTTCCATTTAACATACCCTCAAGCTGCATGTCTGTGTAAACTTCAATTTATCTAATGTGTGGACAGAGCTTCTGAGCTTTTTGAAAGCAGTTTTCAGAAGACAAAACATTACTTTTACCTCCTTGAATTATGAGGTGGAGTTAAACATGTTGGCGCTTTTTTTACAATTTCATTGATAACAATTACTTTTTTATGTATATTAGCCATTTGATTTAACAGTAGGAAGAAAACTTAATAGCAGAGGGTCATAACTTCCATTGCCCACCTTGATGGTGTTAATTATGGCTCTGTGGTGCATTTTTGTTCATATCTTAGTCAATTCCTTATTTTAGAGAGTAGATGACATCAGGGTAATTTGTTAGGAGGGAGTGTAGAGCAAGTGTATTTTAATGGGGTTTTCACTGAGTCTTAGATTGCATATACAAAATATGTATTTACATTGATTTTACTAGTGTAATTTTGTTTTTCTGGAGAGAGCTAATCATAGTAGCATTCTTAGGTTTTGACACATTAATGCTCCTTCTGAGAACTTAATTTGAGGAACAATATTTACAAGTATCTAGATTTTTGTTTTGAATAAACAATAGACTAGTTTACGTAGAATAAATATACCTCATTTCCTATTGCCATCTGGATTTTTTATGCCTACTATCTTGAACAATGTGACTGCAATTTTTATCTACATTTCTTCTTGTGCTAAAATTTGATTATTACAGGTCCTTGTTAGGAATGTTCCGCCAGATGCTGATGAATCAGTTAGTGAATGTGTGGAGCACTTTTTCCTGGTTAACCATCAAGATCATTATCTCATGCATCAGGTTCGAACTTGCTGGAATACAAGTATCTCATGCTGTTTTACTGATAGAAAAGACAAGTATCTCATATTGTTTTGAGGAAGTAGTGATATATTTTTTGTTTCTGAAATTATGCTCCTTGTTGAAGCCCCCCAAACTTTGGGCTAGTGATAACTGATAAGACGCGGTGCGTGATGAATGGGTTAGGCGCATGTCACAGTTCGAATCCATATTGTATTTTGCAACCATCTCATTTAAATTCTTAAGTGGTTAGACGGTGTCACACTTTTATCTAGCTTCTAATACTCCCTACCATGTAGATGGATGGGGGGTGTAGTTTAGGTTGGTATATCTTCTCATGGACAAGTATCATTTCGCCAGAAGCCCTTGGCTGGGAACAGGACTGGCTACTCTTTTGAGACGAGACTATAAACATGTTTGATATGTCAGTTCCATAGATATGGAGTCTTCATTGCTTGTTATGTTTATTTCTTTATGTGTTCTTCATTTTGAGATATAATAAATAAGAAGTAAGCAGTAGTGTTCATCTTGATATGGAGGACACCAATTTGTGCTTCTTTTTTTCCACTTAGAAACTTTCGGTATAGGCTTTCTTGAACAAATCATTTTAGTTCACCATGGGAAGGGGCACTAGTAAAATTCAATATAGAATATTTTTTTTTGTGAACTTTTTATAAGTTAATCCCACCAAATAGTATTTTTAATATATATGGCATCTGGGCACACCTTGACTAATTCTATGTGGTACCTGCTTCCTACCATAGGTATCTGGTAACTCTATCCACCGAGACTGCAGTAGGAATCACCTAATGTGCGCCTAGGATTCTCAACCCGCTTCATTGGCAATTAGGCCATACCCATGGGTGCAATCGACCAATTAGGTCGACTCTCAATGTAGAATTGTCTTACATTGAGCCCACCCAAATGTCAAAATCTTCATTAGTATTGCTTATTTTATTACTGCAGTAGGAGAAATTAAGGACTCGTGGCTTAGCACAAGGAAAACAACTAGTTCTGCCGGCGAAGAGGTTGGCAAAGACATTAGGAACTAAAGTGGAGTATTAGAAGTAAGTTATGATGCGACAACATAACATGAAAGAGGGCAAAAATCTGAATATAACTTAAAGGTAGGGAATAGAAGTATGAATCTTCCAGTATGGATTTTTTTGTGAGAAACCTTCTGAAAGTTTTGTAAGTCATCTTAAAAGCTATTATCTAATTTAGTAATTGAAATTTCAATGTACAATTTTTTCTGCAAGTTTGTTCTTTTATCATCCCTAATGCTTCTTTTCATGGAAGTTATCAGCATTTATTATCCCTTGTAAGATAATTATTCGTCAGTTTGTGCTCTGATAGGATGGTCTTAGATTTTACTATCCTCTGAGAAAAGTTATCTGCATGTTAAATATTTCAGTATGATGGACTAAAATTTCTTATTATATGCAAATTCTTCATATATGCTTTATTTTTTATGTTGATATGCTATTTCATCTTTATTCACTTAGTTGGATTTTACTATAGGGTGTTTATAATGCCAACAAACTGGCAAAATTGGTGAAGGAGAAGAAGAGTAAGCAAAATTGGCTCGACTATTACCAACTTAAGTACTCTAGGGATCAATCAAAACGGCCTATGATGAAGGTATGGATTTGTCCCTGATCCTACAGATTGTTATTTTTAACTTCTAATATCGCAAAGTATGTTCTGAGGCTCAATTAGTACTTCGTTAACTTAGTTTTGTCTACCTCTAAATAGGTAAGTTGTTTCAGTGCATTCTTTTTCAAAATTTGCAGACTGGTTTCCTTGGATGCTTTGGAGCAAAAGTCGACGCAATTGAGCATCAGATTGCTGAAATTGAAAGATTGACAAAAGAGGTAAATACCAAAACTTTAATCTCCCTAAATAAGTTGAAAAATTTCCAATCGACATATCCTTCTTAGATCAGAGGCTTAGAGTGTGTGATGGAGAATACTGAATGACTTGCTTTCAGCACCACTGAACATTGATTAACCATTTATCTGACATTGCCACATTCACAAATGGGTTTATTCTCTTTTTCTTGTCTTTTCCTGTTGTCCCTTTTTTCTGTTTTTGGTTGATGCTGTTGAATAGGAGGGTGTGGAGGTAGAATATTAGAGTAGAAGATTATAGGAGGGCGGGCATATTTCTATTCCATTCTCAAGAGTATTAATATTCTTCTTCTTCTTTTTTTTCTTATCTAGATTTCTATTACTACTTGTGATTCTTTAGCGTCAATATCCTATTTTCTTACTGTTGTTTCTGCTTGTTATTTCTGCTTCTTTTTCATGTCTATCGGAAACACCTGTTTTTTACCTTCTCAAGGTATAGAGGTAAGGTCTGCGTACGCTCTACCCTCTTCAAACCCCAGCAGTGGAATTACATTGAGTTCGTTCTTGTTGGTTAATGCTGTTGTCTTTCTTTGTTTTGGTTGTATTATTTGCTGTCGTTACTGTTCACTTCTCCTTTTGTTTCTATCTTCACTTCTGTATTTTGTTTCGACACTTGATTTTGATATGCTTTACTTGAGACTAAAGTCTATCGGAAACAACCTCTCTACCTATACAAGGTAGGGGTAAGGCTGCATATACACCACCCTCCCCAGACTCCACTTAGCTGGATATGTTGTTGCTGTTATGCTATAAATCAGCTCTAATTCTATTAATGCCTCGGTCTGACTTTACTTGCAGATAGCTGAAGAGAAACAAAGGGTAGAAAAAGACCCAAAGTCTACCATGCCTGCATCATTTGTCTCCTTCAAATCGCGGTGGGGTGCTGCTGTTTGTGCACAAACACAGCAATCCAGAAATCCAACCTTGTGGTTGACAGAATGGGCTCCAGAGCCACGTGATGTATTTTGGGATAACCTGGCAATCCCCTATGTTTCTTTGACAATTAGGAAGCTCATCATTGCTGTTGCCTTCTTTTTTCTGACATTCTTCTTCATGATCCCGATTGCATTTGTCCAAACCCTTGCCAGCCTTGAGGGGATTAGGAAGAAAGCACCATTTCTGAAAGTTATTATTGACGAGTGAGTACCACATTACACCCTTGTTGTGAATTCAGCCTCATCTCTCATTAGTTTTTTGTCATACTCATGATCCTTGATGGTGATATGACACCTTGGTTCATTCATTTCAAGACTCTAGTGACAGTAATTCAAAAAACAAAATGTATTTATGGTTTTTGGTGCCATCAGGTCTTTGTTTTTTTGGTACAATCAGGTCTACTCAGAAGATACTATATCTATCCTAGACACTTTAGGTTTGCTCACTTGTATATATGGTTTCAGTACAACCCATTACTGATTTGTGCTTACTACATACAACCGTTACCTTCTCAAAAAAAAACAAAAAACAGAATCTAGTGGTTTGTGTTTTTACCTTTGTCCATTTATTTTAAGTCTTTTCGTGAGAACAATTTCAAAAACAAAATTTAGTGGTTTGATATTTGTGTGTACTTGCTGGAACTTGTTTGACATTGAAGCTAGGAGAATTGTGTGAATTTTGCATAGTTAGTTTAGCTTTGTATGATTTGTGTCATCTCATTCCTTGAGATACTTTATCGCTTTTACATTATGTCATCACTCACAAAAGAGATGTTTGACAAAAGTATGCAACCTAGAAATGCTATTTTCTATTTTACATAGTGAGATGATCCATGGATTTCTGATTTCTTTGCGATGCTAAATTGACATCACAAGTAATACACAGCAATGAAACACTATCTATATATGCTGAATTTACTCTGCTAGTGGTTCTTCCAAATTCTTTTCTTGCTTTCTCCTCTCTGTTTTGGTCTTTGTGCTGAGGAATGGGCTGTTATATGAGTTGGTATTTTTGCCAATCATGATCATAGCAGTCATGCACCAGCTTATCTCAAATGTAGGTTTTTTTGGTTACTCTTTTATGCCTAATAATTCTACTGATTTATCATGCAGACCTTTCATCAAGGCGTTCATCCAAGGTTTTCTACCTGGGATTGCTTTGAAGATCTTTCTCATATTTCTGCCAACTATATTGATGATGATGTCCAAATTCGAGGGCTGGCTAAGCATATCAGCTCTAGAGAGGAAATCTGCGTCTAAATACTACATCTTCACTATCGTGAATGTGTTCCTCGGGAACATAATTGCAGGAGCTGCATTTGAACAACTAAGTACCTTTCTCAATCAGTCGGCAAACCAGTACGTTTTTAACGAAAATATATTACTACATTCACCTCAGCCTTTCTTTAACTTGTGAATCAATGGGGAAATTTTGGGAATGCAGTTAGAGTGTGTTTCTTTATGTTGACATTGTCCACATAGATGTACTCTTTCAGTTCTGCTCTAATAAATTATTCAGAATTGTAAAACTGCAACGCCTTTGTACACCCGTATGGAGTTAAACATAACATCACTGAGATATCAGTTTCTGCGAAGCTCAGTCCTCTAGGGACTTGGTGAAATGTTTAATTGAGGGACCAGTTTTCTAGTCCTTGTAAAGTTGGGTGTTACAAGAAAACAGTAGATATGAAATTACAATGTATATATAAAGTAATTTTTTTTTTTATTTTTTAGGTATAGCGATAGATTTGTATTATGAACACAAGACAAGAGGTTGGCTTATTGATTTAGGGGTTCAAAATTTCACCTTGAGGTTCCAAGTTCAAGAGGTTGACAACTAGATTTTTGTTTTTTGAACTCCCCAAGTGAAAATCCTATATCCACCATTGGCTAGGAAACAATTCATATAGGCTAGGCTTCCTTGTTACAGATGGCCTCATCCAGTATGTGAAAATGGTCATGTAGACCATGCATGCTAATCATGTATATATGCTCTTTTACTATCCTAAAACCCATGCTGATTAACGAGATCGTTCCTGTTCACAGTTCCATGCCTGTAATAGTGTTTAAATTTCTAGTTCTAGAAGTATGTTACATGGACTTCTGTATGAATGTTGGATACTGGTATTGTGTTTGGCAAGTTTGTTCAGTTTCTAGAAGGTTTTCTTTGCACTTGAGAGGATTGTTAAGCTGTCCTATATTTGAAAAACTTAATTGTAGTATATTTAATGATGTCTTGTCTTCTTGAATAAGAGGAAATACATCTTTAGTCAATATACTAGTCCCTTTTGGTTCCAGCCAATATATGATTGGTTCTTTATGTGCTGATTCTGCTATTATATTTGTATCGCCAGTGTTATCCTATATTCTTATTAGGTGCATTCTAAGTTTTCCATTCTTTGGCAAGTCTTGCTAGTCCATATCCTTTTACTTGAGGCTCATCTTGCTATAAAACTTCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGGTTGACGGCTGGGCTGGTATTGCTGGAGAGATCCTAAGGCTGAAGCCGCTAATATTTTACCACTTGAAGAACTTTTTCTTGGTTAAGACGGAAAAAGATAGAGAAGAGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAGGTTCGTCTTCTCTCTTCCTTCTTATGCCTATATTTTCTGCAGAATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGTGGGGGGAATTGAATGTGGCAAAATAAGGTCATTGAGAATTTAAATACGGGAAATTCTGATAAAAGATGTATAGAAGATTTACTTAAGCCAAGAAAACAAAATAGATTCTTAATTAGTTACACCATTCGCATGAAAGGATAATAAAACATGATACTTATTGAATAAAATATCTATGTGATAAAATAAGCAAAAATTTGATTACTTCCTATGTGTCAATTTGTTTGTCTTACTTTCTCCTTTTAGTTTCTTTTAAAAAGAAGGTGACTTCTCTAGTTTTGACAACACTTTAATTTTAGTATCCCACATGGCATGTTTAAGATCATAAGATTAGAGGGATGATACACATTTTTATGTTTATGACCACAAGATTCAAAGATCTTATTTACTTTCTTAAACTCCGTGACAAGTCAAAATAAGACAAATAAATTGAAACGGATGACACTTCATTGTACTTGTAACGATTATGGTGTCAGTACAAAGTTGATAGCCTTTGAAGTAGTTATGTAGGCCCTACTTCTACTTAGTTGACATGCTAGGGATAACATCAGCTTTGATATTGGATCAGACATGGAATCCCATTGGTTCAAGTGTATGTTATGTTCATAGGAGTGTCGTTTTAATGTTGTTTCTTAGGCCACATGCAACACTTCATTGACTGGGGTATTTGCTAACTGGTAGTATTAATTCTTTCCACATTTAAAAATTAGACAAAGGGAATATGGAGTACTTGTACTGATGGAGATGCACCTATTAATTCCTAGTAAAATTTGTTGTCACCTATTTGCATATGCTAATTCTACTGATTTGAAATTGTTGATGTAGACATGGTTGCATGTTACAATTAGCGTTTTCTGACGCATTCTTTTCCTGAGACAGATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAGGTGTGTGTGGAAGTACATCTTGCAAATAAAAATTTCCACTGTTACAATAGTTTGAGCTCTCTTTTTTTTTTGTGAGGGTCCATTTTTTTTTTCTTCAAATGTCTACAATGCTATCTTCTTCTCTATTTCAGGAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATGAGAGTTAGATCGCGGAGACTCAACCTTAACTAAGTTGTACAGAGAGCACTTCAACACATCATAGTTGAGCTGGCTGGACCAGTTTACATTGGGACGGTTGGCGTTGAAAGTACAAAAAATTGTAAAGAGCTCCGGTGGTAGCATTAGAAGTTTTGTACACTTAAGGATGTTCATATTTTTAGCATTTGCTGGTTGTTGACACTCAGGATATAATCTTGTACACGAGCTTTCTAAGGGAATGTATTTATTTTTATCGATCTTAG</genome_strand>
        <mrna_strand>GGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGACTCATATTGTTATGGCTTATGCCTTCTCATTCTGGACCTGCTATGTCTTAAAAACTGAGTATGCAAAAGTTGCAGCCATGAGGTTGCAGTTTGTCGCCTCTGAAAAACGTCGTCCCGACCAATATACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCTTGTTAGGAATGTTCCGCCAGATGCTGATGAATCAGTTAGTGAATGTGTGGAGCACTTTTTCCTGGTTAACCATCAAGATCATTATCTCATGCATCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGTTTATAATGCCAACAAACTGGCAAAATTGGTGAAGGAGAAGAAGAGTAAGCAAAATTGGCTCGACTATTACCAACTTAAGTACTCTAGGGATCAATCAAAACGGCCTATGATGAAG........................................................................................................................................................ACTGGTTTCCTTGGATGCTTTGGAGCAAAAGTCGACGCAATTGAGCATCAGATTGCTGAAATTGAAAGATTGACAAAAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCTGAAGAGAAACAAAGGGTAGAAAAAGACCCAAAGTCTACCATGCCTGCATCATTTGTCTCCTTCAAATCGCGGTGGGGTGCTGCTGTTTGTGCACAAACACAGCAATCCAGAAATCCAACCTTGTGGTTGACAGAATGGGCTCCAGAGCCACGTGATGTATTTTGGGATAACCTGGCAATCCCCTATGTTTCTTTGACAATTAGGAAGCTCATCATTGCTGTTGCCTTCTTTTTTCTGACATTCTTCTTCATGATCCCGATTGCATTTGTCCAAACCCTTGCCAGCCTTGAGGGGATTAGGAAGAAAGCACCATTTCTGAAAGTTATTATTGACGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTTTCATCAAGGCGTTCATCCAAGGTTTTCTACCTGGGATTGCTTTGAAGATCTTTCTCATATTTCTGCCAACTATATTGATGATGATGTCCAAATTCGAGGGCTGGCTAAGCATATCAGCTCTAGAGAGGAAATCTGCGTCTAAATACTACATCTTCACTATCGTGAATGTGTTCCTCGGGAACATAATTGCAGGAGCTGCATTTGAACAACTAAGTACCTTTCTCAATCAGTCGGCAAACCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGGTTGACGGCTGGGCTGGTATTGCTGGAGAGATCCTAAGGCTGAAGCCGCTAATATTTTACCACTTGAAGAACTTTTTCTTGGTTAAGACGGAAAAAGATAGAGAAGAGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAG...................................................................................................................................GAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATGAGAGTTAGATCGCGGAGACTCAACCTTAACTAAGTTGTACAGAGAGCACTTCAACACATCATAGTTGAGCTGGCTGGACCAGTTTACATTGGGACGGTTGGCGTTGAAAGTACAAAAAATTGTAAAGAGCTCCGGTGGTAGCATTAGAAGTTTTGTACACTTAAGGATGTTCATATTTTTAGCATTTGCTGGTTGTTGACACTCAGGATATAATCTTGTACACGAGCTTTCTAAGGGAATGTATTTATTTTTTTCGTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U594542" ref_strand="+" ref_description="SGN-U594542 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157360438|emb|CAO69661.1| (e_value=7e-76) unnamed; (*ATH) AT1G11960.1 (e_value=4e-72) | Symbol: None | early-responsive to dehydration protein-related / ERD protein-related, low similarity to ERD4 protein (Arabidopsis thaliana) GI:15375406 | chr1:4039613-4043878 REVERSE | Aliases: F12F1.17, F12F1_17; ">
      <seq>aggggaaaaagtgacaactgttggcttttatggagctttgaagttattgtacttctccgatcggctattgctactctgctgctctgttatactcagcagctctgtaattggaaagagatttataatcacaactcacaatagtactagatggcgacacttggagatataggccttgcagcagcaataaatattatatctgccttgatctttcttgtggcatttgcaattttgcggctccaaccattcaatgacagagtttatttccccaaatggtatcttaaggggctgagacacagtcccacccactctggggcattcgtcgccaaatttgttaatgttgattggagagcatatataaggtttctgaactggataccagatgctctgaaaatgcctgaacctgagcttattgaccatgcagggttggactctgctgtttatttgcgcatatacttgctagggctaaaaatctttgttcccataacgttgcttgcatgggctatcctggtacctgtaaattggacaaatagcactctgacaaaatccgactttacttatagtgacattgataagctttccatttcaaatgttccgcttgnatctctcangttttggactcatattgttatggcttatgccttctcattctggacctgctatgtcttaaaaactgantatgcaaaagttgcagccntgangttgcagtttgtcgcnnctgaaaaacgtcntcccgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="93933" stop="90374"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93633" g_stop="93494" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="140" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93493" i_stop="92676" i_length="818">
            <donor d_prob="0.919" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92675" g_stop="92355" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="461" r_length="321" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92354" i_stop="91468" i_length="887">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91467" g_stop="91321" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="608" r_length="147" r_score="0.986"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91320" i_stop="90801" i_length="520">
            <donor d_prob="0.972" d_score="0.96"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90800" g_stop="90674" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="609" r_stop="735" r_length="127" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-U594542" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U594542" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93633" e_stop="93494"/>
          <exon e_start="92675" e_stop="92355"/>
          <exon e_start="91467" e_stop="91321"/>
          <exon e_start="90800" e_stop="90674"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATAGTATGATCTTCTTTCTGCAACTGTTTTTTTTTTTAAAAAAAAGTTTTTTTTGTGTTTGAAAAGGGTTTTTGTTGATGAATTGCGGTTTTACTTTTGCTTGATTTCAGTGTCTGAATGTGTGTAAGATTTCATGTGTTTCCTAATCTCTGATTTGATTCTGCTAGTTAAGGACTTTTTTTTTTTGCCGTTTTAGGTTGCTGATTCGATTGATTTTCTACTTTTCTAATTTGTGTATTTCGAATTTCCATTTTCCCCAGATTCTCTGAGTTAAAAGAAATAGAGATGATCAGTTGTATTTTTGCGTATTTGTTTTTATCAATTAGGAGTATATGGTAATTTTGATAAGTCAAAGTAATCCAACTGAAACTTGCTTTAAAACAGTAAGCTGGTAAGAAGCAGCTGAATGTAGAAATATAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCAATAGATGTTGATACTATAAATTGTGTTTGGCAAGGGTTTATAGAAATAGAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCCATAGATGTTGATACTATAAATTATGTTTGGCAAAGGTTTATAGAAATAGAAGTTTATATTATAACAAAAGTGGAAAGGAAGCATCAGCGATTGTGTTTCATAGTGTGAGTGTTTCCCCATTTGAGAGGTTAAAACTTGCAGCATCTGTCTCGTGGTTTAATTAACCTTCGGAAGGGAGGAGTTGATGGAAGATCCGGAAGTGTATGTTTTCCTTGTCGTTTACTTGTTATCTAAGCAGGACATTGACCTTGTCTTTACAGGTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGGGTATGCTTTCTAATTATTGATATCACTTTTGGAGTGATAAGGCATATTTCTGCGATTGTTAATTGTAACCATGTTTTTAATACCATACTATTTTTCTTTGGTAAACCATGTTGATTAACATGTCGAAAATATCGTATAATTACCTTTTTTATTTTGCTTTGTCAAGTTAACTGGATTCATTTCGGATAAGAATGATTACACTGTGCATTCAATATGAAAATATCACAATAGACCCTATAAAATGAGCTGATATTTGAAAGATTCCTCATTATTTATCTTTTTATTTTTAAGTGAATGTGACTGTAAACTCAAAAAAAAACAATGAAGGTAACTGACTATATTTCTATTGGGGATCTTTGAGGTCTCATTTGATTGTATCAATAATAGGGGTTGACTTCAAACAGTGACGATAAAATGGAAAACCAAATATCTGCTGTCATAACCAGACCAGGGGACTGCTTTCAGCATGGAGTGTAGAACTTGAAACATCAATACTTTAGCTTGTTGCATCAATCTCTTGATTCACATGAAAATCCGAAAAAACCAAACATACTGGATTATCTTATCTTCTTTGTTGGCTGTTTGCGTATACTGTAAAATCAAGATAAATAGGTGGTCATGTTTTTCAAATAGTTTCTTTTTCGACTTCTTATAAGAATGGATGAGGATGATCCTTATAATAGGGGATTTAGGTGTCTTAACATTCAATTAGTCATCTATCTAATCGAGGTTCAGAAACAGGAAAAAGAATCAGCACGATAGGAATTTCAATGTTGTATACTTTAAAAGCTCCTTTATTCCTACTAAAGCATATTGCCTTCGTTGCGTTCATTCTATTTAGAGAAACTAGGTGGTCTGTGATGATTACTGCTTCTTGATTTCTGCAGGCTAAAAATCTTTGTTCCCATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCCGACTTTACTTATAGTGACATTGATAAGCTTTCCATTTCAAATGTTCCGCTTGGATCTCTCAGGTTTGGAGATTTATCTTTCAAAATTTTGAAGAATTTGATCCAGTAGATTTGCCATTACGAGATTGTTTTTTCAACATTTAAGTCTTCTTTGATGTAGGTCTTACGCCTTGAAAACTTTTGAGGTCTTCCTCTTGTTTACTTGTTTATTAATTGTTTTTAGTTTTATCATGATGCTATTTGTAGCCTGCTTTGCTTTTGCATGATCTTGACTAGATCTCTTCTTGGGCCATGAATGAAAATTCTGCAGCTAATGCTTCAAATTTTTTCAAATTTCTTGGCGAGACCACCTAGTAACTTGCAAACAAGATTTGTCTTGGACATGTTTTGAGGATCAGTCATTGAGTGGATTTGCAGTCCGTATTTAGAGTCCCAGTTCTGAGATATGTTAACCCATTTTAGATTCCAGCTTGAAAGTCCATATTTAGCATTCAAGTGAAGTTATCTACTAGGAAAATGGCAATACCCCTTTGCTTACCTTAAAACTCCATATTGTAATTCGTATTGACCTGGATTTTTGCAGGTTTTGGACTCATATTGTTATGGCTTATGCCTTCTCATTCTGGACCTGCTATGTCTTAAAAACTGAGTATGCAAAAGTTGCAGCCATGAGGTTGCAGTTTGTCGCCTCTGAAAAACGTCGTCCCGAC</genome_strand>
        <mrna_strand>AGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAAAATCTTTGTTCCCATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCCGACTTTACTTATAGTGACATTGATAAGCTTTCCATTTCAAATGTTCCGCTTGNATCTCTCAN........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGACTCATATTGTTATGGCTTATGCCTTCTCATTCTGGACCTGCTATGTCTTAAAAACTGANTATGCAAAAGTTGCAGCCNTGANGTTGCAGTTTGTCGCNNCTGAAAAACGTCNTCCCGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563767" ref_strand="+" ref_description="SGN-U563767 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|157360438|emb|CAO69661.1| (e_value=1e-65) unnamed; (*ATH) AT1G11960.1 (e_value=4e-62) | Symbol: None | early-responsive to dehydration protein-related / ERD protein-related, low similarity to ERD4 protein (Arabidopsis thaliana) GI:15375406 | chr1:4039613-4043878 REVERSE | Aliases: F12F1.17, F12F1_17; ">
      <seq>ggaagagagatcgattcgtttgtcaaaacaaaacaaaaaaaaaaaaacgttaccatcatttctcctaacagtatctgtgctgaaaaacacctttgctttcatcttcaatcctatcccaacacagttcatggacttgtgtgcaaaaaacttcaattttcttgcatagttttcattattatccaaaacagtgcaagaaaaatatcttcttgatttggtgggtggtgttctgttggaaaaaactaacttgccactttcttttcttgaattattttcctattatggtgaatacattttcttctcaatattatccaaaataactacattacgttattgtgacttggtggggttttggtttattaggggttggagtttagttaaagtagaagaaaggggaaaaagtgacaactgttggcttttatggagctttgaagttattgtacttctccgatcggctattgctactctgctgctctgttatactcagcagctctgtaattggaaagagatttataatcacaactcacaatagtactagatggcgacacttggagatataggccttgcagcagcaataaatattatatctgccttgatctttcttgtggcatttgcaattttgcggctccaaccattcaatgacagagtttatttccccaaatggtatcttaaggggctgagacacagtcccacccactctggggcattcgtcgccaaatttgttaatgttgattggagagcatatataaggtttctgaactggataccagatgctctgaaaatgcctgaacctgagcttattgaccatgcagggttggactctgctgtttatttgcgcatatacttgctagggctaaaaatctttgttcccataacgttgcttgcatgggctatcctggtacctgtaaattggacaaatagcactctgacaaaatccgactttacttatagtgacattgataagctttccatttcaaatgttccgcttggatcactcaggttttggactcatattattatggcttatgccttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="94319" stop="90467"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94020" g_stop="93494" g_length="527"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="528" r_length="528" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93493" i_stop="92676" i_length="818">
            <donor d_prob="0.919" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92675" g_stop="92355" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="849" r_length="321" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92354" i_stop="91468" i_length="887">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91467" g_stop="91321" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="850" r_stop="996" r_length="147" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="91320" i_stop="90801" i_length="520">
            <donor d_prob="0.972" d_score="0.98"/>
            <acceptor a_prob="0.987" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90800" g_stop="90767" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="997" r_stop="1030" r_length="34" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-U563767" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1029</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563767" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94020" e_stop="93494"/>
          <exon e_start="92675" e_stop="92355"/>
          <exon e_start="91467" e_stop="91321"/>
          <exon e_start="90800" e_stop="90767"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGAGAGATCGATTCGTTTGTCAAAACAAAAC-AAAAAAAAAAAACGTTACCATCATTTCTCCTAACAGTATCTGTGCTGAAAAACACCTTTGCTTTCATCTTCAATCCTATCCCAACACAGTTCATGGACTTGTGTGCAAAAAACTTCAATTTTCTTGCATAGTTTTCATTATTATCCAAAACAGTGCAAGAAAAATATCTTCTTGATTTGGTGGGTGGTGTTCTGTTGGAAAAAACTAACTTGCCACTTTCTTTTCTTGAATTATTTTCCTATTATGGTGAATACATTTTCTTCTCAATATTATCCAAAATAACTACATTACGTTATTGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATAGTATGATCTTCTTTCTGCAACTGTTTTTTTTTTTAAAAAAAAGTTTTTTTTGTGTTTGAAAAGGGTTTTTGTTGATGAATTGCGGTTTTACTTTTGCTTGATTTCAGTGTCTGAATGTGTGTAAGATTTCATGTGTTTCCTAATCTCTGATTTGATTCTGCTAGTTAAGGACTTTTTTTTTTTGCCGTTTTAGGTTGCTGATTCGATTGATTTTCTACTTTTCTAATTTGTGTATTTCGAATTTCCATTTTCCCCAGATTCTCTGAGTTAAAAGAAATAGAGATGATCAGTTGTATTTTTGCGTATTTGTTTTTATCAATTAGGAGTATATGGTAATTTTGATAAGTCAAAGTAATCCAACTGAAACTTGCTTTAAAACAGTAAGCTGGTAAGAAGCAGCTGAATGTAGAAATATAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCAATAGATGTTGATACTATAAATTGTGTTTGGCAAGGGTTTATAGAAATAGAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCCATAGATGTTGATACTATAAATTATGTTTGGCAAAGGTTTATAGAAATAGAAGTTTATATTATAACAAAAGTGGAAAGGAAGCATCAGCGATTGTGTTTCATAGTGTGAGTGTTTCCCCATTTGAGAGGTTAAAACTTGCAGCATCTGTCTCGTGGTTTAATTAACCTTCGGAAGGGAGGAGTTGATGGAAGATCCGGAAGTGTATGTTTTCCTTGTCGTTTACTTGTTATCTAAGCAGGACATTGACCTTGTCTTTACAGGTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGGGTATGCTTTCTAATTATTGATATCACTTTTGGAGTGATAAGGCATATTTCTGCGATTGTTAATTGTAACCATGTTTTTAATACCATACTATTTTTCTTTGGTAAACCATGTTGATTAACATGTCGAAAATATCGTATAATTACCTTTTTTATTTTGCTTTGTCAAGTTAACTGGATTCATTTCGGATAAGAATGATTACACTGTGCATTCAATATGAAAATATCACAATAGACCCTATAAAATGAGCTGATATTTGAAAGATTCCTCATTATTTATCTTTTTATTTTTAAGTGAATGTGACTGTAAACTCAAAAAAAAACAATGAAGGTAACTGACTATATTTCTATTGGGGATCTTTGAGGTCTCATTTGATTGTATCAATAATAGGGGTTGACTTCAAACAGTGACGATAAAATGGAAAACCAAATATCTGCTGTCATAACCAGACCAGGGGACTGCTTTCAGCATGGAGTGTAGAACTTGAAACATCAATACTTTAGCTTGTTGCATCAATCTCTTGATTCACATGAAAATCCGAAAAAACCAAACATACTGGATTATCTTATCTTCTTTGTTGGCTGTTTGCGTATACTGTAAAATCAAGATAAATAGGTGGTCATGTTTTTCAAATAGTTTCTTTTTCGACTTCTTATAAGAATGGATGAGGATGATCCTTATAATAGGGGATTTAGGTGTCTTAACATTCAATTAGTCATCTATCTAATCGAGGTTCAGAAACAGGAAAAAGAATCAGCACGATAGGAATTTCAATGTTGTATACTTTAAAAGCTCCTTTATTCCTACTAAAGCATATTGCCTTCGTTGCGTTCATTCTATTTAGAGAAACTAGGTGGTCTGTGATGATTACTGCTTCTTGATTTCTGCAGGCTAAAAATCTTTGTTCCCATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCCGACTTTACTTATAGTGACATTGATAAGCTTTCCATTTCAAATGTTCCGCTTGGATCTCTCAGGTTTGGAGATTTATCTTTCAAAATTTTGAAGAATTTGATCCAGTAGATTTGCCATTACGAGATTGTTTTTTCAACATTTAAGTCTTCTTTGATGTAGGTCTTACGCCTTGAAAACTTTTGAGGTCTTCCTCTTGTTTACTTGTTTATTAATTGTTTTTAGTTTTATCATGATGCTATTTGTAGCCTGCTTTGCTTTTGCATGATCTTGACTAGATCTCTTCTTGGGCCATGAATGAAAATTCTGCAGCTAATGCTTCAAATTTTTTCAAATTTCTTGGCGAGACCACCTAGTAACTTGCAAACAAGATTTGTCTTGGACATGTTTTGAGGATCAGTCATTGAGTGGATTTGCAGTCCGTATTTAGAGTCCCAGTTCTGAGATATGTTAACCCATTTTAGATTCCAGCTTGAAAGTCCATATTTAGCATTCAAGTGAAGTTATCTACTAGGAAAATGGCAATACCCCTTTGCTTACCTTAAAACTCCATATTGTAATTCGTATTGACCTGGATTTTTGCAGGTTTTGGACTCATATTGTTATGGCTTATGCCTTC</genome_strand>
        <mrna_strand>GGAAGAGAGATCGATTCGTTTGTCAAAACAAAACAAAAAAAAAAAAACGTTACCATCATTTCTCCTAACAGTATCTGTGCTGAAAAACACCTTTGCTTTCATCTTCAATCCTATCCCAACACAGTTCATGGACTTGTGTGCAAAAAACTTCAATTTTCTTGCATAGTTTTCATTATTATCCAAAACAGTGCAAGAAAAATATCTTCTTGATTTGGTGGGTGGTGTTCTGTTGGAAAAAACTAACTTGCCACTTTCTTTTCTTGAATTATTTTCCTATTATGGTGAATACATTTTCTTCTCAATATTATCCAAAATAACTACATTACGTTATTGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTAAAAATCTTTGTTCCCATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCCGACTTTACTTATAGTGACATTGATAAGCTTTCCATTTCAAATGTTCCGCTTGGATCACTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGGACTCATATTATTATGGCTTATGCCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U594543" ref_strand="+" ref_description="SGN-U594543 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ccctttagttataaaaaaaaaaagaaaaaattaattccattatttaataggagtagggtttattttattttatttattgctctagacaattgaagaagagagatcgattcgtttgtcaaaacaaaacaaaaaaaaaaaacgttaccttcttttcccctaacagtatctgggctgaaaaacccctttgttttcttcttcaatcctatcccaacacagttcagggatttgggggcaaaaaacttcaattttctggcatagttttctttattatccaaaacggggcaaaaaaaatatcttcttgatttgggggggggggttctgtggaaaaaaactaacttgccactttcttttctggaattatttccctattagggggaaaactttttcttcccaatattatccaaaataactactttacgttattgggactggggggggtttgggtttattaggggttggagtttatttaaagtaaaaaaagggggaaaaagggacaactgtgggcttttatggagctttgaagttattgaacttccccgatcggttattgctactcggcggctcggttatactcaccagctctgtatttggaaaaaaatttataatcccacctcccaatagtactaaagggcgacccttggaaatataggccttgcagcagcaataaatattatatcggcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="94411" stop="92315"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94113" g_stop="93494" g_length="620"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="620" r_length="620" r_score="0.908"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93493" i_stop="92676" i_length="818">
            <donor d_prob="0.919" d_score="0.86"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92675" g_stop="92615" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="621" r_stop="681" r_length="61" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-U594543" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U594543" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94113" e_stop="93494"/>
          <exon e_start="92675" e_stop="92615"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTCTAATTATAAAAAAAAAAAGAAAAAATTAATTCCATTATTTAATAGGAGTAGTGTTTATTTTATTTTATTTATTGCTCTAGACAATTGAAGAAGAGAGATCGATTCGTTTGTCAAAACAAAACAAAAAAAAAAAACGTTACCATCATTTCTCCTAACAGTATCTGTGCTGAAAAACACCTTTGCTTTCATCTTCAATCCTATCCCAACACAGTTCATGGACTTGTGTGCAAAAAACTTCAATTTTCTTGCATAGTTTTCATTATTATCCAAAACAGTGCAAGAAAAATATCTTCTTGATTTGGTGGGTGGTGTTCTGTTGGAAAAAACTAACTTGCCACTTTCTTTTCTTGAATTATTTTCCTATTATGGTGAATACATTTTCTTCTCAATATTATCCAAAATAACTACATTACGTTATTGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATAGTATGATCTTCTTTCTGCAACTGTTTTTTTTTTTAAAAAAAAGTTTTTTTTGTGTTTGAAAAGGGTTTTTGTTGATGAATTGCGGTTTTACTTTTGCTTGATTTCAGTGTCTGAATGTGTGTAAGATTTCATGTGTTTCCTAATCTCTGATTTGATTCTGCTAGTTAAGGACTTTTTTTTTTTGCCGTTTTAGGTTGCTGATTCGATTGATTTTCTACTTTTCTAATTTGTGTATTTCGAATTTCCATTTTCCCCAGATTCTCTGAGTTAAAAGAAATAGAGATGATCAGTTGTATTTTTGCGTATTTGTTTTTATCAATTAGGAGTATATGGTAATTTTGATAAGTCAAAGTAATCCAACTGAAACTTGCTTTAAAACAGTAAGCTGGTAAGAAGCAGCTGAATGTAGAAATATAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCAATAGATGTTGATACTATAAATTGTGTTTGGCAAGGGTTTATAGAAATAGAAGTTCATATTATAACAAAAGTGGAAAGGAAGTATTTATCTTTGTCCATAGATGTTGATACTATAAATTATGTTTGGCAAAGGTTTATAGAAATAGAAGTTTATATTATAACAAAAGTGGAAAGGAAGCATCAGCGATTGTGTTTCATAGTGTGAGTGTTTCCCCATTTGAGAGGTTAAAACTTGCAGCATCTGTCTCGTGGTTTAATTAACCTTCGGAAGGGAGGAGTTGATGGAAGATCCGGAAGTGTATGTTTTCCTTGTCGTTTACTTGTTATCTAAGCAGGACATTGACCTTGTCTTTACAGGTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCC</genome_strand>
        <mrna_strand>CCCTTTAGTTATAAAAAAAAAAAGAAAAAATTAATTCCATTATTTAATAGGAGTAGGGTTTATTTTATTTTATTTATTGCTCTAGACAATTGAAGAAGAGAGATCGATTCGTTTGTCAAAACAAAACAAAAAAAAAAAACGTTACCTTCTTTTCCCCTAACAGTATCTGGGCTGAAAAACCCCTTTGTTTTCTTCTTCAATCCTATCCCAACACAGTTCAGGGATTTGGGGGCAAAAAACTTCAATTTTCTGGCATAGTTTTCTTTATTATCCAAAACGGGGCAAAAAAAATATCTTCTTGATTTGGGGGGGGGGGTTCTGTGGAAAAAAACTAACTTGCCACTTTCTTTTCTGGAATTATTTCCCTATTAGGGGGAAAACTTTTTCTTCCCAATATTATCCAAAATAACTACTTTACGTTATTGGGACTGGGGGGGGTTTGGGTTTATTAGGGGTTGGAGTTTATTTAAAGTAAAAAAAGGGGGAAAAAGGGACAACTGTGGGCTTTTATGGAGCTTTGAAGTTATTGAACTTCCCCGATCGGTTATTGCTACTCGGCGGCTCGGTTATACTCACCAGCTCTGTATTTGGAAAAAAATTTATAATCCCACCTCCCAATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTAAAGGGCGACCCTTGGAAATATAGGCCTTGCAGCAGCAATAAATATTATATCGGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U603840" ref_strand="+" ref_description="SGN-U603840 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157360440|emb|CAO69663.1| (e_value=4e-34) unnamed; (*ATH) AT3G21630.1 (e_value=1e-22) | Symbol: None | protein kinase family protein, contains protein kinase domain, Pfam:PF00069 | chr3:7615416-7618588 REVERSE | Aliases: MIL23.20; ">
      <seq>ggttgtcaagtgtcaactaacacaaccatattttcatccattggcatctttcattcaagattctaaaaagagttcaaaaaatctcaacccatttttcaactagtacatagttgaaaatcagatgattttttttcaagaaaatagaagctttgagttggttttaggccttttagtgttaaacattttgtgggtgggggttaaatcccagtgtagtgatgattgtgatgcattagcttcattttatgtatggaatggtgctaacctcacttttatgtctaatactttttcaacccccatcaagaatatccttagttataatcctcagataaccaatccagatattattcaatcccaaagcagagttaatgttcccttctcatgtagctgtgttgatgggaaattcatgggacatcagtttgatgtgcaggtcaagactaatactacttatccgagaatcactcgtctttattgttcgaaccttacaacagttgaaaagttgcaggagtctaacagttatgatcctaacaatgttcctgtgaattcaatagtaaagggtattgtcaactgctcttgtggaaatagtcatgtgtcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="105757" stop="104565"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105458" g_stop="104865" g_length="594"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="594" r_length="594" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-U603840" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>594</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U603840" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105458" e_stop="104865"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTGTCAAGTGTCAACTAACACAACCATATTTTCATCCATTGGCATCTTTCATTCAAGATTCTAAAAAGAGTTCAAAAAATCTCAACCCATTTTTCAACTAGTACATAGTTGAAAATCAGATGATTTTTTTTCAAGAAAATAGAAGCTTTGAGTTGGTTTTAGGCCTTTTAGTGTTAAACATTTTGTGGGTGGGGGTTAAATCCCAGTGTAGTGATGATTGTGATGCATTAGCTTCATTTTATGTATGGAATGGTGCTAACCTCACTTTTATGTCTAATACTTTTTCAACCCCCATCAAGAATATCCTTAGTTATAATCCTCAGATAACCAATCCAGATATTATTCAATCCCAAAGCAGAGTTAATGTTCCCTTCTCATGTAGCTGTGTTGATGGGAAATTCATGGGACATCAGTTTGATGTGCAGGTCAAGACTAATACTACTTATCCGAGAATCACTCGTCTTTATTGTTCGAACCTTACAACAGTTGAAAAGTTGCAGGAGTCTAACAGTTATGATCCTAACAATGTTCCTGTGAATTCAATAGTAAAGGTTATTGTCAACTGCTCTTGTGGAAATAGTCATGTGTCAAA</genome_strand>
        <mrna_strand>GGTTGTCAAGTGTCAACTAACACAACCATATTTTCATCCATTGGCATCTTTCATTCAAGATTCTAAAAAGAGTTCAAAAAATCTCAACCCATTTTTCAACTAGTACATAGTTGAAAATCAGATGATTTTTTTTCAAGAAAATAGAAGCTTTGAGTTGGTTTTAGGCCTTTTAGTGTTAAACATTTTGTGGGTGGGGGTTAAATCCCAGTGTAGTGATGATTGTGATGCATTAGCTTCATTTTATGTATGGAATGGTGCTAACCTCACTTTTATGTCTAATACTTTTTCAACCCCCATCAAGAATATCCTTAGTTATAATCCTCAGATAACCAATCCAGATATTATTCAATCCCAAAGCAGAGTTAATGTTCCCTTCTCATGTAGCTGTGTTGATGGGAAATTCATGGGACATCAGTTTGATGTGCAGGTCAAGACTAATACTACTTATCCGAGAATCACTCGTCTTTATTGTTCGAACCTTACAACAGTTGAAAAGTTGCAGGAGTCTAACAGTTATGATCCTAACAATGTTCCTGTGAATTCAATAGTAAAGGGTATTGTCAACTGCTCTTGTGGAAATAGTCATGTGTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U577328" ref_strand="+" ref_description="SGN-U577328 Tomato 200607#2 [2 ESTs aligned] ">
      <seq>ggtcgctcttagtactgttgggttatggacctttttcccttcctatgtggataaataaaagtccaatttggaccaacccatttttgcccataggcccatttttatgaggcaaatataaacctatttagggtcttattttcagacatacaagagtgttttttcagcagccaaaaagagagaaagagagattttcgcagtcaaaaatccagccataacaaccaacttcaaattgcgatccccgcttagtttcttgtccgattgagctgatttttggacaacatattatcttcatctcaatctttgattaggaactgacagagttggatttggtggcctgcagcttcagttttgctgtcgtgaacagtagctgcgaaattggtgattttgctcctttaattctctagatttggagcaatcttattttgttgttgctcgttgtttgacactttgttttgtggacaattttggagaacaatattgtaactcttggtgattatagtggagcttttggacccgtggttttttactcttcacatcgaaggggtttccacgtaaatcttgatgtcttgtgcgattggcttattattgtcatgtgatatttgtatcggtgaattacttgctgccttactatcacattgcttgtggttgtttgttttctcttggttcaaatcgaaaaaggcaagtatagacttgggaattcttccgctgtgatcctgtcaggcattctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="-" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="112276" stop="110976"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111997" g_stop="111276" g_length="722"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="730" r_length="718" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="-" ref_id="SGN-U577328" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U577328" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111997" e_stop="111276"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGTTGGGTTATGGGTCTTTTTTTCCCTTCCTATGTGGATAAATAAAAGCCCAATTTGGACCAACCCATTTTTGCCCATAGGCCCATTATTATGAGGCAAATATAAACCTATTTAGGGTCTTATTTTCAGACATACAGAGAGAG-TTTTTCAGCAGCCAAAAGAGAGAAAAAAGAGAGAAATTCGCAGTCAAAAATCCAGCCATAACAACCAACTTCAAATTGCGATTCCCGCTTCGTTTCTTGTCCGATTGAGCTGATTTTTGGACAGCATATTATCTTCATCTCAATCTTTGATTAGGAACTGACAGAGTTGGATTTGGTGGTCTGCAACTTCAGTTTTGCTGTCGTGAACAGTAGCTGCGAAATTGGTGATTTTGCTCCTTTAATTCTCTAGATTTGGTGCAGTCTTATTTTGTTGTTGCTCGTTGTTTGGCACTTTGTTTTGTGGCCAATTTTGGAGAACAATATTGTAACTCTTGGTGATTATAGTGGAGCTTTTGGTCCCGTGGTTTTTTACTCTTCACATCGAAGGGTTTTCCACGTAAATCTTGGTGTCTTGTGTGATTGGTTTATTATTGTCTTGTTATATTTGTTTGGTTGAATTACTTGCTGCCTTACTATCATATTGCTTATGGTTGTTTGTTTTCTCTTGGTTCAAATCGAAAAGGGAAAGTATAGACTTGGGTATTCTTCCGCTGTTATCCTGTCAGACATTCTTTG</genome_strand>
        <mrna_strand>TACTGTTGGGTTATGGACCTTT-TT-CCCTTCCTATGTGGATAAATAAAAGTCCAATTTGGACCAACCCATTTTTGCCCATAGGCCCATTTTTATGAGGCAAATATAAACCTATTTAGGGTCTTATTTTCAGACATACA-AGAGTGTTTTTTCAGCAGCCAAAA-AGAG-AGAAAGAGAGATTTTCGCAGTCAAAAATCCAGCCATAACAACCAACTTCAAATTGCGATCCCCGCTTAGTTTCTTGTCCGATTGAGCTGATTTTTGGACAACATATTATCTTCATCTCAATCTTTGATTAGGAACTGACAGAGTTGGATTTGGTGGCCTGCAGCTTCAGTTTTGCTGTCGTGAACAGTAGCTGCGAAATTGGTGATTTTGCTCCTTTAATTCTCTAGATTTGGAGCAATCTTATTTTGTTGTTGCTCGTTGTTTGACACTTTGTTTTGTGGACAATTTTGGAGAACAATATTGTAACTCTTGGTGATTATAGTGGAGCTTTTGGACCCGTGGTTTTTTACTCTTCACATCGAAGGGGTTTCCACGTAAATCTTGATGTCTTGTGCGATTGGCTTATTATTGTCATGTGATATTTGTATCGGTGAATTACTTGCTGCCTTACTATCACATTGCTTGTGGTTGTTTGTTTTCTCTTGGTTCAAATCGAAAAAGGCAAGTATAGACTTGGGAATTCTTCCGCTGTGATCCTGTCAGGCATTCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584346" ref_strand="+" ref_description="SGN-U584346 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|157360442|emb|CAO69665.1| (e_value=2e-51) unnamed; (*ATH) AT4G04330.1 (e_value=1e-50) | Symbol: None | expressed protein | chr4:2116551-2118592 REVERSE | Aliases: T19B17.5, T19B17_5; ">
      <seq>gagactagttccttcacagctctccttatccccttcaacacttcaaagagaaaacagaaatcatctattcaagtcatcgaaacagagaacttgtcaatctactcgtttccactgtcacaagatgtatgtccctggatttgggacatcaccagaatccacagcagcccaacacttacaccactttttcaattttattgctgttaaaattgttgctgcacagcttcagagctacaatcctgaagcatacgaggagctgagggagtttctggataagaattcattgagtgatggggataagttctgcgcggatttgatgagggaatccccgagacataaagatctagctatgcgcattttagaggttcgatcagcatactgtaaggacgactttgagtgggataacttgaagcgcctagcatcaaagatggtggatgattctaataaaaagctaatgacggattatatcgtggatactagctgcattgcagatggaaagncagatatgcaactaatcaaactccttaaaattttaatcccactgtgtatttagganaaactacagaaatatacatgtttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="116895" stop="123616"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117194" g_stop="117328" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="134" r_length="134" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="117329" i_stop="117572" i_length="244">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117573" g_stop="117664" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="226" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="117665" i_stop="122583" i_length="4919">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="122584" g_stop="122701" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="344" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="122702" i_stop="122858" i_length="157">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.861" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="122859" g_stop="122875" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="361" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="122876" i_stop="122953" i_length="78">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.822" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="122954" g_stop="123016" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="424" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="123017" i_stop="123167" i_length="151">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="123168" g_stop="123316" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="577" r_length="153" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-U584346" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584346" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117194" e_stop="117328"/>
          <exon e_start="117573" e_stop="117664"/>
          <exon e_start="122584" e_stop="122701"/>
          <exon e_start="122859" e_stop="122875"/>
          <exon e_start="122954" e_stop="123016"/>
          <exon e_start="123168" e_stop="123316"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCAATTGTATCTTCACAGCTCTCCTTATTCCCTTCAACACTTCAAAGAGAAAACAGAAATCATCTATTCAAGTCATCGAAACAGAGAACTTGTCAATCTACTCGTTTCCACTGTCACAAGATGTATGTCCCTGGTGTGTAATCATCATTATTATCTTTTCTTCTCCTACAATTTTCAGATTTCTTTTTTCACAACACTCGTGTTCGGTTTAACTTGTTTACACCATAGGCCAATCCAAAATTTAGACTCTATTTTTTAAATTATGGGTTCATATATACTTTTTATTGTAGTTTTTATGGACTTAAAAGTATTGAATTCAGATGAACTTGATGTTTGCTTTGCTTTGATCTAGATAATAAGATGTTTGACTTATGCAGGATTTGGGACATCACCAGAATCCACAGCAGCCCAACACTTACACCACTTTTTCAATTTTATTGCTGTTAAAATTGTTGCTGCACAGCTTCAGGTTCATTGTCTTCCACTTAATTACTAGCAAATAGTTGCAGAACAGAAGTATCTCATTAACATGTTTCTGTATCCCTAAATATAGATAGAAGTATATACACAGACTTTGATAGCAGAACAATGTAAACATTGAAGTTTTCTTTATCAGATCACCTAAAGGATAACCAGAGATAAGTGTCCATCAAAAGTGAGATTTATAACCTGAAAGATAAGTCAAGTTACATGCTAAAGAGGTTTAAATGCAAGTAATAGTTATACATTATTTACATTGTTCGTAAGTGTTGAATGCCTTGAATTGGGCCCTTAATTTTCTATTGATTCTGTATGTTGGGCCCAAGCCTGTTAGGGCGTAGCTTAGCACTATATATAGACGCTATGGGAAACCCTATTCTGTAATTCTGTTTTTGCCTCTCCATAATAAAACTGCTCCCTCTCTTCCCGTGGACGTAGCCAATTTATTGGTGAACCACGTAAATCTGTTGTCTTGTTTTTCGCGTTTATATTTTCTCGTATTATCTCAAATTCCGCACAACAAATTGGTATCAGAGCCTCTCGGTTAATCGGTGTTCTTGGAGAATTTGAGATGTCTGCTTTGAACGTGAAAATCGACAAATTCACAGGGAGGAACAGTTTCAGTTTATGGCAGATCAAGATGCGGGCCTTGTTGAAACAGCAAGGCTTCTGGGCGCCGTTGTCGAAAGACAAGAACGCCGTCGTTACTCCTGAGATGGCGATTCTGGAGGAAAAGGCGCACTCGACGATCATGCTGTGTCTCGCGGATGACGTCATCACGGAGGTCTCGGATGAAGAGACTGCTGCTGGTCTGTGGTTGAAGCTGGAGAGTTTGTACATGACAAAATCTCTAACCAACAAGCTGCTTCTGAAACAACGTCTATTCGGTTTACGAATGGCTGAAGGTACACAACTCAGGGAACACTTAGAGCAATTGAATACTTTGTTATTAGAATTGGGTAATATCGATGTGAAGATCGAGGATGAAGATGCTGCCCTGATTCTGTTAGTATCTCTCCCAATGTCATTTGAGAATTTTGTTCAATCGTTCATTGTTGGGAAAGATACTGTGTCACTGGAAGAAGTCAGATCAGCCCTTCATAGCAGGGAATTACGGCATAAGGCTAACGGCACAAGTACGGACATACAGCCTTCCGGTCTGTTCACCAGTAGCGGAAAGGGAAGGAAAAACAGCGGAAAGAAAAATAAGCCGATGTCGAAGGGTGCAAAGCCGGATGATGTTTGTAATTACTGCAAGGAGAAGGGACATTGGAAATTTGATTGTCCGAAGAAGAAGAAGCAATCGGAAAAACAATCAGTGTCTGCTGCTGTTGCTGAAGAAGACACCAATTCTGAAGAAGATATTGCCCTAGTTGCGGATGAGCACACTCATCATTCAGATGTGTGGGTTCTTGATTCTAGGGCATCCTATCACATCTGTCCTAGGAGAGAGTGGTTCACGACTTATGAGTAGGTAGACGGAGGCAGCATCTCGATGGCCAACAGTTCTGTCTGCAAGGTGGTTGGGACAGGCTCGATCAAGATAAGGACACATGACGGTAGCTTCTGCACATTGAACGAGGTCAGGCACGTTCCATTGATGACGAAAAATCTGATATCTCTCAGTCTTTTGGACAGCAAGGGATTCAGCTGGTCGGGAAAAGATGGAGTCTTGCGGGTCTGGAAGGGTTCAAATTTGATTCTGAAAGGTGTCATGCGTGGTACTTTGTATTTTCTACAAGGTTCCACGGTTACAGGTTCAGCCCATGTTGCATCGTCAGAATTTCACCAGAAGGATATGACTAAGTTATGGCACATGAGACTTGGTCATATGGGTGAAAGAGGGATGCAAATTCTGTCAAAGGAGGATTTACTTGCTGGTCATAAGGTTAAGAGCCTAGAGTTTTGTGAACATTGTGTTTTTGGAAAACTACATCGCAACAAGTTTCCAAAGGCCATTCATAGAACAAAAGGCACACTTGATTATATCCATTCTGATTGCTGGGGTCCATGCCGTGTTGAGTCTTTGGGAGGCTGCAGATTTTTTGTGTCCATTATTGATGACTACTCAAGGATGACTTGGGTGTACATGATGAAGCATAAAAGTGAAGCCTTCCAGAAGTTCAAGGAGTGGAAAATTTTGATGGAAAATCAAACAGGGAAGAAGATCAAGAGGTTGCGAACTGATAATGGGCTGGAATTCTGTTGGTCTGAATTTGATCAATTCTGTAAAGATGAAGGGATTGCTCGACATCGCACAGTCAGAAATACACCACAGCAGAACGGTGTAGCTGAGCGGATGAATCAAACACTTCTGGAGAGAGCAAGGTGCATGCTCTCTAATGCTGGGCTAAATAGAAGATTCTGGGCAGAAGCGGTTAGTACAGCTTGCTACTTGATTAACCGCGGATCACATACAGGCATACAGTGCAAGACACCTATGGAGATGTGGTCTGGAAAAGCTGCTGATTATTCAAATCTGAAAGCTTTTGGTTGTACAGCTTACTATCACGTCAGTGAAGGTAAGTTAGAACCAAGAGCTAAAAAGGGAGTATTTGTGGGCTACGGAGATGGAGTGAAAGGTTTCAGAATCTGGTCTCCAGCAGAAAAGAGGGTTATTATGAGCAGGAACGTTGTCTTTGATGAAAGTTATCTGCTTAGAATCATTGTGAAGCCTACAACTACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACAGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTTATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAAGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCATTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACTCAGCCGGATGGTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGACTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTAGCGAGGTATGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTGTGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTTGCAACCTACAGTGACTTTGTCTACTACGGAAGCGGAGTACATGGCCTTGACAGAGGCTGCAAAAGAAGGGATTTGGTTGAAAGGGCTGGTTAGTGATCTTGGTCTGCATCATTATCAGGCTACGGTGTATTGTGACAGTTTGAGCGCAATTTGTCTAGCCAAGGATCAAGTCCATCATGAGAGAACCAAGCATATTGACGTAAGGTATCATTTTCTGAGAAGTGAGAAGAGAATCAAGGTGAAGAAAGTAGGAACTGCTGATAATCCTGCTGATATGTTTACAAAGTCGGTTCCACAGAGCAAGTTTCAACACTGTTTGGACTTGCTCAACATCAGAAGCTGTTAATTGCCCTGCGGGGCAACTCTGAGGAAGAGGGGGAGGCCTGACACTATCATAGTGCGTCTGAAGAATCTGTTCGGAGAATTCAAGTCAAGGTGGAGATTTGTTGAATGCCTTGAATTGGGCCCTTAATTTTCTATTGATTCTGTATGTTGGGCCCAAGCCTGTTAGGGCGTAGCTTAGCACTATATATAGACGCTATGGGAAACCCTATTCTGTAATTCTGTTTTTGCCTCTCCATAATAAAACTGCTCCCTCTCTTCCCGTGGACGTAGCCAATTTATTGGTGAACCACGTAAATCTGTTGTCTTGTTTTTCGCGTTTATATTTTCTCGTATTATCTCAAATTCCGCACAACAGTAAGTTATATAAAGTGCAGAAAATTCTTAAAATTAGTTAACCATAATTTCACATAACAGAGCTACAATCCTGAAGCATACGAGGAGCTGAGGGAGTTTCTGGATAAGAATTCATTGAGTGATGGGGATAAGTTCTGCGCGGATTTGATGAGGGAATCCCCGAGACATAAAGATCTAGGTACATCAACAATTTTCTAATTTCACTTGCAAGTTTTTAAGAATTTTGGTTCTGCAATTCAAGATTTTACATCTACTTCATCAAACTTTTATATCATGTTAACTTTTCTGATAATGTTTGCTTGAATCTTTGGGAACTTTCATTGGCTTCTTCACAGCTATGCGCATTTTAGAGGTTGGTTTACCCTCCAGCTTATCTTTTTTCCCCCATTATTTATGGTAATCAAACTGAATTAGATATATTTTCATAAAGGTTCGATCAGCATACTGTAAGGACGACTTTGAGTGGGATAACTTGAAGCGCCTAGCATCAAAGGTAAAATTAAAAGATTTACTTATCTTTAAAAAGAAACTTTCGATATAAAGATGTTAAAGATTAAAGCAGAAGAATGCATATAATTTCTCCTCTGTGGCACTTCTTTTTCATTCTTACTTAGCTTGTAGCTACTACCTTGAGATATTTGCAGATGGTGGATGATTCTAATAAAAAGCTAATGACGGATTATATCGTGGATACTAGCTGCATTGCAGATGGAAAG-CAGATATGCAACTAATCAAACTCCTTAAAATTTTAAT-CCACTGTGTATTTAGGA-AAACTACAG-AATATACATGTTTT</genome_strand>
        <mrna_strand>GAG-ACTAGTTCCTTCACAGCTCTCCTTATCCCCTTCAACACTTCAAAGAGAAAACAGAAATCATCTATTCAAGTCATCGAAACAGAGAACTTGTCAATCTACTCGTTTCCACTGTCACAAGATGTATGTCCCTG....................................................................................................................................................................................................................................................GATTTGGGACATCACCAGAATCCACAGCAGCCCAACACTTACACCACTTTTTCAATTTTATTGCTGTTAAAATTGTTGCTGCACAGCTTCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACAATCCTGAAGCATACGAGGAGCTGAGGGAGTTTCTGGATAAGAATTCATTGAGTGATGGGGATAAGTTCTGCGCGGATTTGATGAGGGAATCCCCGAGACATAAAGATCTAG.............................................................................................................................................................CTATGCGCATTTTAGAG..............................................................................GTTCGATCAGCATACTGTAAGGACGACTTTGAGTGGGATAACTTGAAGCGCCTAGCATCAAAG.......................................................................................................................................................ATGGTGGATGATTCTAATAAAAAGCTAATGACGGATTATATCGTGGATACTAGCTGCATTGCAGATGGAAAGNCAGATATGCAACTAATCAAACTCCTTAAAATTTTAATCCCACTGTGTATTTAGGANAAACTACAGAAATATACATGTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U603118" ref_strand="+" ref_description="SGN-U603118 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|133711804|gb|ABO36622.1| (e_value=8e-56) copia; (*SWP) sp|P10978|POLX_TOBAC (e_value=2e-23) Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum; ">
      <seq>cctagagttttgtgaacattgtgtttttggaaaactacatcgcaacaagtttccaaaggccattcatagaacaaaaggcacacttgattatatccattctgattgctggggtccatgccgtgttgagtctttgggaggctgcagattttttgtgtccattattgatgactactcaaggatgacttgggtgtacatgatgaagcataaaagtgaagccttccagaagtttaaggagtggaaaattttgatggaaaatcaaacagggaagaagatcaagaggttgcgaactgataatgggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="119272" stop="120170"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="119572" g_stop="119870" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="299" r_length="299" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-U603118" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>299</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U603118" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="119572" e_stop="119870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAGAGTTTTGTGAACATTGTGTTTTTGGAAAACTACATCGCAACAAGTTTCCAAAGGCCATTCATAGAACAAAAGGCACACTTGATTATATCCATTCTGATTGCTGGGGTCCATGCCGTGTTGAGTCTTTGGGAGGCTGCAGATTTTTTGTGTCCATTATTGATGACTACTCAAGGATGACTTGGGTGTACATGATGAAGCATAAAAGTGAAGCCTTCCAGAAGTTCAAGGAGTGGAAAATTTTGATGGAAAATCAAACAGGGAAGAAGATCAAGAGGTTGCGAACTGATAATGGGC</genome_strand>
        <mrna_strand>CCTAGAGTTTTGTGAACATTGTGTTTTTGGAAAACTACATCGCAACAAGTTTCCAAAGGCCATTCATAGAACAAAAGGCACACTTGATTATATCCATTCTGATTGCTGGGGTCCATGCCGTGTTGAGTCTTTGGGAGGCTGCAGATTTTTTGTGTCCATTATTGATGACTACTCAAGGATGACTTGGGTGTACATGATGAAGCATAAAAGTGAAGCCTTCCAGAAGTTTAAGGAGTGGAAAATTTTGATGGAAAATCAAACAGGGAAGAAGATCAAGAGGTTGCGAACTGATAATGGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575023" ref_strand="+" ref_description="SGN-U575023 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|133711804|gb|ABO36622.1| (e_value=0) copia; (*ATH) AT4G23160.1 (e_value=3e-26) | Symbol: None | protein kinase family protein, contains Pfam domain PF00069: Protein kinase domain | chr4:12129496-12134198 FORWARD | Aliases: F21P8.50, F21P8_50; (*SWP) sp|P10978|POLX_TOBAC (e_value=2e-68) Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum; ">
      <seq>ganggnntgctcgacatcgtacagtcagaaatacaccacagcagaacggtgtagctgagcggatgaatcaaacacttctggagagagcaaggtgcatgctctctaatgctgggctagatagaagattctgggcagaagcggttagtacagcttgctacttgattaaccgcggaccacatacaggcatacagtgcaagacacctatggagatgtggtcagaaaaagctgctgattattcaaatctgaaagcttttggttgtatggcctactatcacgtcagtgaaggtaagttagaaccaagagctaaaaagggagtatttgtgggctacggagatggagtgaaaggtttcagaatctggtctccagcagaaaagagggttattatgagcaggaacgttgtctttgatgaaagttctctgcttagaaccattgtgaagcctacaactacgtcagaaactaggagtcttgacaaacaggtggagtttcaagtcattcagaacgagagcgatttaaaggaacctgaagaggaggatcaagagccacagactgaaactgatattccagaatctatgccatcagatatccatcagagtatagctcaagatcggccaaggagggttggagttcggccacctacgaggtatggttttgaggacatggtgggttatgcactgcaggctgctgaagaggtagatacatctgagccgtctacttacaaagaagccattttaagttctgattctgaaaaatggtttgccgatatgggagatgagatggagtccctacacaagaatcagacatgggatctggtcatacagccttcggggagaaagattattacttgcaaatgggttttcaagaagaaggaagggatatcaccagcagaaggagtcaagtataaagtcagggttgttgctagaggtttcaaccaaagagagggagtggactacaatgagatcttctcaccagtggtcagacatacttccatccgagtgttactagcgatagttgcacatcagaatctggagcttgaaacacttgatgtgaagacagcgtttctacatggagagttggaggaagagatatacatgactcagccggatggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="119614" stop="121318"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="119913" g_stop="121018" g_length="1106"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1106" r_length="1106" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-U575023" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>1106</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U575023" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="119913" e_stop="121018"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGGATTGCTCGACATCGCACAGTCAGAAATACACCACAGCAGAACGGTGTAGCTGAGCGGATGAATCAAACACTTCTGGAGAGAGCAAGGTGCATGCTCTCTAATGCTGGGCTAAATAGAAGATTCTGGGCAGAAGCGGTTAGTACAGCTTGCTACTTGATTAACCGCGGATCACATACAGGCATACAGTGCAAGACACCTATGGAGATGTGGTCTGGAAAAGCTGCTGATTATTCAAATCTGAAAGCTTTTGGTTGTACAGCTTACTATCACGTCAGTGAAGGTAAGTTAGAACCAAGAGCTAAAAAGGGAGTATTTGTGGGCTACGGAGATGGAGTGAAAGGTTTCAGAATCTGGTCTCCAGCAGAAAAGAGGGTTATTATGAGCAGGAACGTTGTCTTTGATGAAAGTTATCTGCTTAGAATCATTGTGAAGCCTACAACTACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACAGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTTATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAAGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCATTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACTCAGCCGGATGGT</genome_strand>
        <mrna_strand>GANGGNNTGCTCGACATCGTACAGTCAGAAATACACCACAGCAGAACGGTGTAGCTGAGCGGATGAATCAAACACTTCTGGAGAGAGCAAGGTGCATGCTCTCTAATGCTGGGCTAGATAGAAGATTCTGGGCAGAAGCGGTTAGTACAGCTTGCTACTTGATTAACCGCGGACCACATACAGGCATACAGTGCAAGACACCTATGGAGATGTGGTCAGAAAAAGCTGCTGATTATTCAAATCTGAAAGCTTTTGGTTGTATGGCCTACTATCACGTCAGTGAAGGTAAGTTAGAACCAAGAGCTAAAAAGGGAGTATTTGTGGGCTACGGAGATGGAGTGAAAGGTTTCAGAATCTGGTCTCCAGCAGAAAAGAGGGTTATTATGAGCAGGAACGTTGTCTTTGATGAAAGTTCTCTGCTTAGAACCATTGTGAAGCCTACAACTACGTCAGAAACTAGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGCTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGATATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGTCAGGGTTGTTGCTAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAAACACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACTCAGCCGGATGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604002" ref_strand="+" ref_description="SGN-U604002 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|133711804|gb|ABO36622.1| (e_value=2e-152) copia; (*ATH) AT4G23160.1 (e_value=1e-36) | Symbol: None | protein kinase family protein, contains Pfam domain PF00069: Protein kinase domain | chr4:12129496-12134198 FORWARD | Aliases: F21P8.50, F21P8_50; (*SWP) sp|P10978|POLX_TOBAC (e_value=4e-86) Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum; ">
      <seq>gggtttccaagttccagggaaggaaaatcacgtctgcaagttgaagaagtccttatatggacttaagcagtctccaaggcagtggtataaaaggtttgacagctatatggtgaagttgggctatactcggagctcatatgattgttgtgtctactacaataggctcaatgatgattcattcatctatctggtgctttatgtagatgatatgttgatagctgcaaagaagaagtatgacattcagaagctgaagggtttacttagtgctgagtttgagatgaaggatctgggagccgctcggaagattttagggatggagatcattagagacagagagagaaggaaacttttcttgtcacagagaagctacattcagaaggtcttggcgaggtttggcatgtcttcatctaagcccattgatacccccagtgctgccaatatccatctcactgccatgttcgctccacagtcagaagaagagaaggagtatatgtcacgagtcccttatgccagtgccgtaagaagtttgatgtatgctatggtctgtacaaggccagatttagcacatgcagtcagtgtagtgagcagattcatgggacaaccagggagagaacattggcaggctgtgaagagaattttccggtaccttagaggtacatctgacgttggtctcatttatggaggtgatactcagtgcttggttactggctattctgattcagactatgctggagatgttgacacaagaagatcgatgactggctatgtgtttaccctgggaggatctgtcgtcagttggaaggcaacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="120716" stop="122124"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121015" g_stop="121824" g_length="810"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="810" r_length="810" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-U604002" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>810</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U604002" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121015" e_stop="121824"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGACTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTAGCGAGGTATGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTGTGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</genome_strand>
        <mrna_strand>GGGTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAAGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTGGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584655" ref_strand="+" ref_description="SGN-U584655 Tomato 200607#2 [21 ESTs aligned] (*GB) gi|79481791|ref|NP_193944.2| (e_value=0) ATP; (*ATH) AT4G22130.1 (e_value=0)  Symbol: None | similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:At3g14350.2); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:At1g53730.1); similar ... ; (*SWP) sp|Q6R2J8|SRF8_ARATH (e_value=0) Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8; ">
      <seq>atttttcgccgacacctatagatacacactgccagtggagtcttgtataaatttctctctcttcattaaaacgaaagcttggaatcggagagtttctaaacgatggtgacacctaccactactgacgatgttaccttcttgtcatttccctgtctttctttcgccatgcttcttcttcttcctcttacctctgtttctgcacaacccctttaattcttgactaacaagaacgaacaaaacagaaaatgaatagaaatagctgtaagcaagacacccttttcccccttttgccactagtggtgattgtggcagtgggtttttactcatcttttgttgcggaaggaaacactgatccgaatgatttgcaagctcttcaggtcttgtatgcttcactgaataatccttcacagctctctaattggaagtcgaatggtggcgatccctgtggtgagtcttggaaaggaatcacttgtcaggcctcttctgttgtttcaattcaaattcctgatttgggactcaatggaacgttgggatacatgctaaatggtcttacctcgttaaagaacttggatttgagcggcaacaacattcatgattctattccatatcagcttccacccaatctcactagcctgaatcttgcaaacaacaatataagtggcaacattccgtattcctttgctggcatggttacacttagctatctgaatcttagccataactcactctctcaaacaattggagaattgttcagcaaccactctgatctgggaaccttggatctgtcctcaaataatttttctggagatctcccctcttcattcagttcgttgacaaatctttccacacttcatctggaaaacaatcagctaagtggccctctcaatatcctgattgatctacctttgactaatttaaatgttgcaaagaatcattttaatggatggatcccaaatgagctcctatctatccccaacttcatatacgatgggaattcctttgcaaatggtccagctcctcccccaccaccatacactgcacctcctcctggaagatctcgccacaaccgtagccattctcctcctagttcacgtacaagaccaggttctgatggccccccatctccagaaaatggtgataaaaagaagggattgacaactggagctatcgttggcatagctcttggatcttctcttgcaattctttttgctctggtagcacttgtattttgcttccggaggggcaagggcaaggaaattgctacaagaccctctacaggaagtcttccagttggcacagataaagtgaatatggaggtacaagagcaaagggcgaagcctgtggttgctgttgctgacttgaagcccccacctaccgaaaaggtgactgttgaaatgatacaaggaaagaatggatctgtcaggagagtgaagtctccaataactgcatctgcttatactgttgctgcattgcaaacagcaacaaacagcttcagtcaagaaaatctcattggtgaaggatctcttgggcgtgtttatagggcagagtttcctaatgggaagataatggtcataaaaaagatcgacagtgcagcactgtcgctgcaggaggaagataactttctcgaagctgtctcaaatatgtcaaggctgagacacccaaacattgttcaattgataggatattgtgctgagcatggacagcgtcttctggtttatgaccatgttgcaaatggtagcttgcatgatatgctgcactttgctgatgagaggagcgaattgcttacttggaatgcccgggttagagtagcacttggcactgctcgagctttagagtacttgcatgaagtctgtctaccttctgttgtacatagaaacttcaaatccgcaaatattttactagatgaagagctcaatccccatttatcagattgtgggttagcagctttgactcccaacacagaacgccaggtgtcatctacacagatgattggttcattcggctatagcgctcctgaatttgctttatctggaatatacactgtaaaaagtgacgtatatagttttggtgtggtaatgttggagttgttaacaggaaggaagccacttgatagttcaagggtgagatcagagcagtcccttgtgagatgggctacgcctcaactccatgatatagatgccttgtcaaaaatggttgatcctgcactaaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="138757" stop="145515"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="139057" g_stop="139419" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="363" r_length="363" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="139420" i_stop="139997" i_length="578">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.912" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="139998" g_stop="140130" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="496" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="140131" i_stop="140219" i_length="89">
            <donor d_prob="0.943" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="140220" g_stop="140291" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="497" r_stop="568" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="140292" i_stop="140380" i_length="89">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="140381" g_stop="140446" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="569" r_stop="634" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="140447" i_stop="140537" i_length="91">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="140538" g_stop="140609" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="635" r_stop="706" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="140610" i_stop="140721" i_length="112">
            <donor d_prob="0.879" d_score="1.00"/>
            <acceptor a_prob="0.800" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="140722" g_stop="140793" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="707" r_stop="778" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="140794" i_stop="141399" i_length="606">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="141400" g_stop="141471" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="779" r_stop="850" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="141472" i_stop="141549" i_length="78">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="141550" g_stop="141615" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="851" r_stop="916" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="141616" i_stop="141710" i_length="95">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="141711" g_stop="141776" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="917" r_stop="982" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="141777" i_stop="141861" i_length="85">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="141862" g_stop="142184" g_length="323"/>
          <reference_exon_boundary r_type="cDNA" r_start="983" r_stop="1305" r_length="323" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="142185" i_stop="142336" i_length="152">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="142337" g_stop="142593" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="1306" r_stop="1562" r_length="257" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="142594" i_stop="143992" i_length="1399">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.809" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="143993" g_stop="144264" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="1563" r_stop="1834" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="144265" i_stop="144346" i_length="82">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="144347" g_stop="144482" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1835" r_stop="1970" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="144483" i_stop="144890" i_length="408">
            <donor d_prob="0.559" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="144891" g_stop="145033" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1971" r_stop="2113" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="145034" i_stop="145117" i_length="84">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="145118" g_stop="145215" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="2114" r_stop="2211" r_length="98" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-U584655" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2211</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584655" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="139057" e_stop="139419"/>
          <exon e_start="139998" e_stop="140130"/>
          <exon e_start="140220" e_stop="140291"/>
          <exon e_start="140381" e_stop="140446"/>
          <exon e_start="140538" e_stop="140609"/>
          <exon e_start="140722" e_stop="140793"/>
          <exon e_start="141400" e_stop="141471"/>
          <exon e_start="141550" e_stop="141615"/>
          <exon e_start="141711" e_stop="141776"/>
          <exon e_start="141862" e_stop="142184"/>
          <exon e_start="142337" e_stop="142593"/>
          <exon e_start="143993" e_stop="144264"/>
          <exon e_start="144347" e_stop="144482"/>
          <exon e_start="144891" e_stop="145033"/>
          <exon e_start="145118" e_stop="145215"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTTCGCCGACACCTATATATACACACTGCCAGTGGAGTCTTGTATAAATTTCTCTCTCTTCATTAAAACGAAAGCTTGGAATCGGAGAGTTTCTAAACGATGGTGACACCTACCACTACTGACGATGTTACCTTCTTGTCATTTCCCTGTCTTTCTTTCGCCATGCTTCTTCTTCTTCCTCTTACCTGTGTTTCTGGACAACCCCTTTAATTCTTGACTAACAAGAACGAACAAAACAGAAAATGAATAGAAATAGCTGTAAGCAAGACACCCTTTTCCCCCTTTTGCCACTAGTGGTGATTGTGGCAGTGGGTTTTTACTCATCTTTTGTTGCGGAAGGAAACACTGATCCGAATGATTGTGAGTTTCTTCACTAGTTGAAAATCTTGGATCCGTTTTTAGACCTTCATTATCGATTTTGAGCTTAGTGGTTTGGGTGTTTTTCTGTTTTCTTGAATGTGTTGGAGGAAGAGGCTTTTTTTGTTATTTGGTTTTGCCACTCTGTGAATGTTGTGATATAAGAGCACATTTCTTGTGATTGTTTGAATGCCTGATTTGGTAATGTATTTGTTTGCCCTTCTTCTGGGGTTCATTTTATTCCCCTTTTTGTTGGGTTTCCGAGTCAATGCAAGTCAAGATTGATGAGTTGGTACCAAAAAATGGATTCTTGATCTTTGTCCTAAAAATTATATGGCTGGGATTTTTTGTGATTATAATGTGAGAACGCATGCAAATGAATTTAAACTGTTTGATTTGATAAGATAATATGATCTCTTGCCCTTTCTTGGCGTCTTGCTTGTATTTAATTAGTTTCAGAGCCAACACTAGCTTAACATTGAGGCTTTTCTTGTTGAATCTTGATAAGATAAATATTGAATCTTGGTTCTTGTTGGAGAGATGTTCTGGCTTTGTCGTTGCCTGACTCTTGTAATCTGCAGTGCAAGCTCTTCAGGTCTTGTATGCTTCACTGAATAATCCTTCACAGCTCTCTAATTGGAAGTCGAATGGTGGCGATCCCTGTGGTGAGTCTTGGAAAGGAATCACTTGTCAGGCCTCTTCTGTTGTTTCAATGTAAGTTTACATAGCATTAGCTTTGTGGGCGTCATCATACGTTTTAGTTATGATTTGATTGATACAATAGCTGGTTCTTGCTGAAACAGTCAAATTCCTGATTTGGGACTCAATGGAACGTTGGGATACATGCTAAATGGTCTTACCTCGTTAAAGAACTTGTAAGAGCTTGTCCTTTTAGCGGTAAAAGGATAATTTAGAGGACCTATTATCACAATAAAATTGAACTTCTGATATCTGTTGTCTTCAGGGATTTGAGCGGCAACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCTGTAATGTTGACTCCTTGCTATGTGTTTGGTTTGTTTGAAAACGTCCTGGTTTATGATTGTCCCACTGGAACTATAATCATTGTCAATGCAGGAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCTGTGAGTGACCAGTCTCACCAGGCACTTTCCAAAACAAAAATAACATTTGCTTGGTTTTCTCTTTATTCTATTGAATCATTTCAGGCAACTATTTAAAATAGCTTTTTTTCAGGAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCAGCAACCACTCTGATCTGGGAACCTTGTAAGTGTTCTACTTAATTTTTACTTGATTGATCCTTTCTGGTAATTTTTTTTCCTTTTCTTCTTTTTCTCTAAAAGAGTTCAATACATTGCCACACTTGAAGGACTTCTTTTCTACACCAGTCCAATTCCAGTTACTAGCTTGAATTCTTAGCACCATGGTGTCTCCGACCCACAGTACACGGCCCTTCATTTGTTTTGAAGTGCCTGCAATGTACAGACACGACTGCTTCCAAATATGTTCTCAAAACAAATATAGGATCTAATCATATTCAAATGCCTCTTAGAATCATTATCTGCTTAATTTCAATGAACAATGAAGTCTGGAGGCTTGTAAAGTCCAACATTTTATTTCCCTTCGTAGCCTTTTTATGTGGGAATTCGTTTTGATTGTATTAGGATAGGTGCCCTGCTCCTCTTTGAAGCTTTCAGTTGCCTTTTGTTTTCATTTGTTGGTTCTTTCAGAATCCCATTTAAGTAAACCTACATTAGAGCTCAGTATCCCTGCTACAAAGAGCTTTCTGGCTATATTGATTCCTCATGTCCTTACAACATCTGTTTCACTATCTAATAGTTATAATTTTTCACTGATTTGCTGCTACTGCAGGGATCTGTCCTCAAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTTGACAAATCTTTCCACACTGTAAGCATAATAATTTTCTACTAATAGGATTTGTTATTCCGTTACTTGACTTGCCCATGAAATTGGCATCTCTTGTAGTCATCTGGAAAACAATCAGCTAAGTGGCCCTCTCAATATCCTGATTGATCTACCTTTGACTAATTTGTAAGTTTCAATACCTCTTCTTGAATTGATGGGCTTAGCTAGTTTTATTCAATGCCAGTAGAGTGTTTTATGGGCAAAAAAAAACCTTTTTGCAGAAATGTTGCAAAGAATCATTTTAATGGATGGATCCCAAATGAGCTCCTATCTATCCCCAACTTCATGTAAGTGATTTCACATCCTATATATTCTTACATGGTTTAGAATGTTACGGTTTCAAAGGGTGTGACATAACATCTAACATGACAGATACGATGGGAATTCCTTTGCAAATGGTCCAGCTCCTCCCCCACCACCATACACTGCACCTCCTCCTGGAAGATCTCGCCACAACCGTAGCCATTCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCCCCCATCTCCAGAAAATGGTGATAAAAAGAAGGGATTGACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAGGTGTGTTCCCTTAACTTGGTCCCTTCCTGACACAATATTGTCATTGGTGCTAATACCCTCAGATGACTAATAGTTGTGTTGTGATGTGCCATCTTAGTTTGGAAATTGGTACGAACTTCGCTGATTTCTCATGTATTTCTGCTTAATCTTAGTGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAGGTAATTTCAGACGTTTAATGTTGTCACTCTTACGTTTCCTACTCGTGATGTGCATTCAAAACTATTTGAAGCTGAACAATATTGAATAAATTCAATCGGTCTCTCATGGACGTCTTTCATTTTTGATGCTTTGGAGAAACACATACTTGTGAGTTATATAATGTTCATCAGATACATAAGGACATCAAAAGGGATATATAAAGATGTTGGCCACTCCACCTATCACCCTGTTGCTAAGATGCTTTAACATAGAATCAAGCCGTTACACGTGTGGGACAATGTTGCATTACCTAATGTCCAACCTCGGGCAAATGAGGCTGTAATGATATGGTACCCGACCATAACTCAACCCCAAAAGTTAACTCATGAGGGGAGGATTGCTCAAGTCCGTATAAGGAGACCCATCAGCCTATTCCCCAACCAATGTGGGACTTTACCCTCTACCGGGAGCCCAAATGGAGATGTGGTCCAATCAGAGATGGACCTGGCAAAGATATGGCACCAGGGTCTAACTCAATCCCAAAAGCTTAGCTCATGAGGGGATGATTGCCCAAGTCCATATATGGAGACCACTAGTCCATTCCTCAACCAATGTGAGACTTTTACCCACTCTAACAAAGGCATCCAAAGTAGAATATAAGGTTCTTGTCCTACTTTATCCATTGCCTTAACGTTATGGTTGAACCCTTAGATTCTTTCACAATATCTGTCAAACCGGGCAAACACTAAAAGGGTACATACTTGATCTATGTGTTACTAAACCTGAGTAGATGTTAGTAGACTTCTTGATACTCTGTTCGCATGGGAGTTTAAGGATTGGGTCCTCTTGCTAGTACATAATCTGGTTTTGAGGTGATTTTTTTAACTGAGATTAAGTCCTTTATACTCTTTGATTGAACTTGCTCTTTTAGGTCTTTCGCAAAGTTGATTGCCCACAGTAGGACATTCTGATGAACACATGTCAATTGTTCACTCCTCTGGGTGGCCTGGTCACATCTTTGCTTTTATATGGATAGGTGTAATGATATGGTCACTTTGATGGTCATCTCACTTGTCTTCTCAGCCTGATTTAACTATGATACTATAACCTTGTCCTTTGGTTACATCATGCAATCCTAAGCAAAAATATTCTTAGTAGTTTCAAAGTCTGACATTATATATCTTCTACTTTGTGGTTTATTATTGGATGTGCTGCTGGTTATTTCTTTTTGAATGAACCAATTGTGTTGACTGTTTTTCTGCTCCAAACTTGATGCCAACTGTGTCCCAATAAATGATTTAAGAATTTCATATGTCAACAACATTTTTGATGAGGAAACTTTTAGTTTATTATTCATGTAGTTTCTAAGGAAGGTGCCAACTGAAAATCTGAATTGATCTTTTGAACTGTCCTTGCCAGATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCTCGAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGAGTATGTTATAGCTGTATAGTATTTTACTTGTCTTGCCCTTCTCTTGTTGAGTTAGCTTAAAACTTGAATGTCTTCTTTTCAGGTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCCAACACAGAACGCCAGGTGAGTGAGTAAAGAAGATTTAATCGACGTCGTTGTTTTAACGGAGGGCGTTAATAATTTTGGGTGGTAGTGATGCATATCATGTTTATGAGATGATGTCAATCAACTTACCTAGTACTGTAGTAGGAGCAATATTTATAAGCAACTATTTCTAGGTAGATCTTGACAGACTTAGTCATGAGACTGGCAATTCTGATTGTGGCAGCTTAGCATTGTTTTCTTATTCTTCTGGAGCAATCTTGTTAGGTGCTTAAACACTTGGATTACCACAGTGCACAAACTTTCAGGTGAATTATTTTTGTGAAAAGAGAACCTCCTTGTACAGAAGCTCGGGTGAAGGAAGCTAATGCGGGAAGGCTAATTGATTCTGTTATGGGCATTGCCTAAAATTGTTCTGAATGTTGACAGGTGTCATCTACACAGATGATTGGTTCATTCGGCTATAGCGCTCCTGAATTTGCTTTATCTGGAATATACACTGTAAAAAGTGACGTATATAGTTTTGGTGTGGTAATGTTGGAGTTGTTAACAGGAAGGAAGCCACTTGATAGGTAAACTAGATCTTCAATACATTGCTAGTTAACTTACACTATTGAATTCTTTTAATGACTTGATTCTTGTTAAAAATCATATAGTTCAAGGGTGAGATCAGAGCAGTCCCTTGTGAGATGGGCTACGCCTCAACTCCATGATATAGATGCCTTGTCAAAAATGGTTGATCCTGCACTAAATG</genome_strand>
        <mrna_strand>ATTTTTCGCCGACACCTATAGATACACACTGCCAGTGGAGTCTTGTATAAATTTCTCTCTCTTCATTAAAACGAAAGCTTGGAATCGGAGAGTTTCTAAACGATGGTGACACCTACCACTACTGACGATGTTACCTTCTTGTCATTTCCCTGTCTTTCTTTCGCCATGCTTCTTCTTCTTCCTCTTACCTCTGTTTCTGCACAACCCCTTTAATTCTTGACTAACAAGAACGAACAAAACAGAAAATGAATAGAAATAGCTGTAAGCAAGACACCCTTTTCCCCCTTTTGCCACTAGTGGTGATTGTGGCAGTGGGTTTTTACTCATCTTTTGTTGCGGAAGGAAACACTGATCCGAATGATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAGCTCTTCAGGTCTTGTATGCTTCACTGAATAATCCTTCACAGCTCTCTAATTGGAAGTCGAATGGTGGCGATCCCTGTGGTGAGTCTTGGAAAGGAATCACTTGTCAGGCCTCTTCTGTTGTTTCAAT.........................................................................................TCAAATTCCTGATTTGGGACTCAATGGAACGTTGGGATACATGCTAAATGGTCTTACCTCGTTAAAGAACTT.........................................................................................GGATTTGAGCGGCAACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCT...........................................................................................GAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCT................................................................................................................GAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCAGCAACCACTCTGATCTGGGAACCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCTGTCCTCAAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTTGACAAATCTTTCCACACT..............................................................................TCATCTGGAAAACAATCAGCTAAGTGGCCCTCTCAATATCCTGATTGATCTACCTTTGACTAATTT...............................................................................................AAATGTTGCAAAGAATCATTTTAATGGATGGATCCCAAATGAGCTCCTATCTATCCCCAACTTCAT.....................................................................................ATACGATGGGAATTCCTTTGCAAATGGTCCAGCTCCTCCCCCACCACCATACACTGCACCTCCTCCTGGAAGATCTCGCCACAACCGTAGCCATTCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCCCCCATCTCCAGAAAATGGTGATAAAAAGAAGGGATTGACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAG........................................................................................................................................................TGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCTCGAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGA..................................................................................GTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCCAACACAGAACGCCAG........................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCATCTACACAGATGATTGGTTCATTCGGCTATAGCGCTCCTGAATTTGCTTTATCTGGAATATACACTGTAAAAAGTGACGTATATAGTTTTGGTGTGGTAATGTTGGAGTTGTTAACAGGAAGGAAGCCACTTGATAG....................................................................................TTCAAGGGTGAGATCAGAGCAGTCCCTTGTGAGATGGGCTACGCCTCAACTCCATGATATAGATGCCTTGTCAAAAATGGTTGATCCTGCACTAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U599274" ref_strand="+" ref_description="SGN-U599274 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157328706|emb|CAO22724.1| (e_value=5e-12) unnamed; (*ATH) AT4G22130.1 (e_value=3e-12)  Symbol: None | similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:At3g14350.2); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:At1g53730.1); similar ... ; (*SWP) sp|Q6R2J8|SRF8_ARATH (e_value=3e-11) Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8; ">
      <seq>gccccaatgtctgaagttgtgcaagcactggttcggttaatgcaaagagcaagtgtggtcaaaaggcgatccagtgatgaatcagctttcacatacaagactccggatcatgagacggttgacatgccatagataaaacatacacgacgaagcagcctttgcaattttgtaagtaacttctgtgaaggtcaagagtaactgtggcagatgaaactgggaggtgtcaataccagggacattaaatatgtaattatttttcacatcttcgtcgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="145604" stop="146476"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="145903" g_stop="146176" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-U599274" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>274</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U599274" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="145903" e_stop="146176"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCCCAATGTCTGAAGTTGTGCAAGCACTGGTTCGGTTAATGCAAAGAGCAAGTGTGGTCAAAAGGCGATCCAGTGATGAATCAGCTTTCACATACAAGACTCCGGATCATGAGACGGTTGACATGCCATAGATAAAACATACACGACGAAGCAGCCTTTGCAATTTTGTAAGTAACTTCTGTGAAGGTCAAGAGTAACTGTGGCAGATGAAACTGGGAGGTGTCAATACCAGGGACATTAAATATGTAATTATTTTTCACATCTTCGTCGTTT</genome_strand>
        <mrna_strand>GCCCCAATGTCTGAAGTTGTGCAAGCACTGGTTCGGTTAATGCAAAGAGCAAGTGTGGTCAAAAGGCGATCCAGTGATGAATCAGCTTTCACATACAAGACTCCGGATCATGAGACGGTTGACATGCCATAGATAAAACATACACGACGAAGCAGCCTTTGCAATTTTGTAAGTAACTTCTGTGAAGGTCAAGAGTAACTGTGGCAGATGAAACTGGGAGGTGTCAATACCAGGGACATTAAATATGTAATTATTTTTCACATCTTCGTCGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566031" ref_strand="+" ref_description="SGN-U566031 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|79368730|ref|NP_176423.3| (e_value=2e-90) unknown; (*ATH) AT1G62330.1 (e_value=2e-92)  Symbol: None | similar to expressed protein [Arabidopsis thaliana] (TAIR:At1g11990.1); similar to putative growth regulator [Gossypium hirsutum] (GB:AAT64033.1); contains InterPro domain Hypothetical plant protein (InterPro:IPR004348) | chr1:2305055... ; (*SWP) sp|Q8W486|Y1491_ARATH (e_value=6e-22) DUF246 domain-containing protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910; ">
      <seq>aagaaccaaaaaagagaagcaaacctttaaaagataaaaaaattctatgacttctcggagcaattctttttctaatttctcagaatcatcgtacgaatacgatgataaggattgttccaccgtcacgacttcggatcgggatgagcccctgaatccgggtcataggaacaactcgtttaacgggttattgggtttcacgttcgggtccaagaagatgaggaagaagaaacccttttgtcaggaaaaagcaattgtcgggttggctctattggtgatcggttttgtcgggatgaattggtggatgctttcccggatccagaactcgggtcgggcttctcaggttgagttcaggttcttggaagataattcctccactctatcaattcgggaagaactgctaaggcttgggcttggcgaagagagaaagcctcagaaaacaatctacgcacgattgctggctaaagctgctcattccttagctgagggacagaaaaaatccgagccaaaagatttgtgggctgaaccgtattttgttgcttcctcttggaaaccttgtgctgagcagcgtcaatggctacctagtgagggaaaaaatggttacattattgtcactgcaaatggtgggataaatcagcagcgagtagctgtctgcaatattgttgctattgcaagattactcgatgcaaccttggttcttccgaaatttctgtacagtagtgtttggaaagatgtgagccagtttggcgagatctaccaggaggagcatttcattgactacctgaaacctgatattcgtatagttagagaacttcctcaggagttgcagtcattagatctagaggccattggcagtttggtgacagatgcagatgttgtaaaagaagcaaagccaggtttctacaagaaatatattcttcctattttacataaaaacggagttgttcattttcttggatttgggaatcgattggcatctgacccgttaccacctcaggtgcaggtaaacccatcgaacttgatattaggcttccttgttgatttctcaatttttcatattatcttctcatttagtctgattccataatttctaccttggttcctgatttggggacttcatctagagacttcgatgcagatgtaattttcatgctctgaaatttgttccaaagatagaagaaactggagctttacttatacggaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0320D04-o5wK2/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02HBa0320D04.2" temp_strand="+" temp_description="C02HBa0320D04.2  AC215437.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0320D04 sequenced_by:kribb upload_account_name:korea">
        <position start="151685" stop="155040"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="151985" g_stop="152372" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="388" r_length="388" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="152373" i_stop="152783" i_length="411">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="152784" g_stop="152879" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="484" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="152880" i_stop="152959" i_length="80">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="152960" g_stop="153059" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="584" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="153060" i_stop="153144" i_length="85">
            <donor d_prob="0.463" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="153145" g_stop="153206" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="585" r_stop="646" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="153207" i_stop="153351" i_length="145">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="153352" g_stop="153440" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="647" r_stop="735" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="153441" i_stop="154192" i_length="752">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="154193" g_stop="154313" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="736" r_stop="856" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="154314" i_stop="154394" i_length="81">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="154395" g_stop="154740" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="857" r_stop="1202" r_length="346" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0320D04.2" gen_strand="+" ref_id="SGN-U566031" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1202</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0320D04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U566031" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="151985" e_stop="152372"/>
          <exon e_start="152784" e_stop="152879"/>
          <exon e_start="152960" e_stop="153059"/>
          <exon e_start="153145" e_stop="153206"/>
          <exon e_start="153352" e_stop="153440"/>
          <exon e_start="154193" e_stop="154313"/>
          <exon e_start="154395" e_stop="154740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAACCAAAAAAGAGAAGCAAACCTTTAAAAGATAAAAAAATTCTATGACTTCTCGGAGCAATTCTTTTTCTAATTTCTCAGAATCATCGTACGAATACGATGATAAGGATTGTTCCACCGTCACGACTTCGGATCGGGATGAGCCCCTGAATCCGGGTCATAGGAACAACTCGTTTAACGGGTTATTGGGTTTCACGTTCGGGTCCAAGAAGATGAGGAAGAAGAAACCCTTTTGTCAGGAAAAAGCAATTGTCGGGTTGGCTCTATTGGTGATCGGTTTTGTCGGGATGAATTGGTGGATGCTTTCCCGGATCCAGAACTCGGGTCGGGCTTCTCAGGTTGAGTTCAGGTTCTTGGAAGATAATTCCTCCACTCTATCAATTCGGGTATGTTTGAATCACTCTTTTATGTTAATTCTTGAATACTTCCGCAAAAAAGTACAACTAATGTTGAAACTTAGTCGAAAGCTGGGTTATGGATATGAATTTTGTTAAAGATGGTACTTCAGATATTGTCAATCATCTCAATATTTAGCTGTGAAGTTGAAAAAATGAATCTTGAATGTTAAGCAACTAGATATATGTTACTTATTCGACAAACTGTAAACTTAACTTCTCTTTCTCTAAATTGTTTAGTATTGGAGTGAAATAGGGGCAACTATATGGATATAGAGGATTCATATGGCTGACCCGACTAATTTAGGAATGAGGCTTAGTTGATAGTTGAAGTATGAATTGATTCACTGAGTTGGAGGTCTTTTGATACATATGGAGTAAATGTTATTTTTGATATGGTAGGAAGAACTGCTAAGGCTTGGGCTTGGCGAAGAGAGAAAGCCTCAGAAAACAATCTACGCACGATTGCTGGCTAAAGCTGCTCATTCCTTAGCTGAGGTACTTTTTGTTTCTACAAGGAAGTGAGTAGATCTATTTAGTTGGTTTTACTTTGATAATGTGAGGTCGACACATTGCAGGGACAGAAAAAATCCGAGCCAAAAGATTTGTGGGCTGAACCGTATTTTGTTGCTTCCTCTTGGAAACCTTGTGCTGAGCAGCGTCAATGGCTACCTAGTGGTCTCTCTCTCTCTCCCTCTTCCTCTCTTCATGCATGTTACGTTTCAGGTAGTTAACCTGCTTCTTATGTGGCTAAAATTTTCAGAGGGAAAAAATGGTTACATTATTGTCACTGCAAATGGTGGGATAAATCAGCAGCGAGTAGCTGTAAGTTATGTCTTCTGCTGTGACATTATTTGTTCCATATTTCTTTAGTTTAGCTTGCCAAGCTAAGGACAAAGGTTCCGTGCTACTATTATATGAAAGCTATGGTCTTTTTTCTTAACTAACACATTTTTTCCTTGCACAACAGGTCTGCAATATTGTTGCTATTGCAAGATTACTCGATGCAACCTTGGTTCTTCCGAAATTTCTGTACAGTAGTGTTTGGAAAGATGTGAGGTAAAAACTTACTACTTACTGTCAATTTCACTTCTTTCTTTCCTTTTTCCTGTTGTACAATAGGGATTGCAAAATAATATAGCAAAACTGTCATAATAGTGGGATCTTTGATTACAGATTCACAACATCTTTGATATACTATTTTGTAACTTCACTTGCGAATTCTTGTTGTTGACTGGAAACACGTACTAGTTGAATAGTATTTCATTTAATTCTTTTCCATGTTCTTTCCATAACTAATTAAACAACTAAACTGTCTTAGTCTTGAAATTCTTTAACTCAATAATTGGGAATTTGTGATGTAACACTGATTTCTCTTTGGTCGCTTGTCTACACAACATTAGCTCTCCAATACTTTGTGATTAAACCAAAGGTTCGCCTGGCTTTTCTTTGTTGAATCTACTTTAGAGATGCAAGTATGTGATAGTTCTTTTCCTGAACTCTTCCCCAATGTGCTTTGAGCTATATAAGTATCTCCATATGCGTTTTTAACTGCTGTTGAACCTCCCTTGCATTTGCAACTAGCTATGCCCCGTCCAAAAAAAATTATATGTTATCTTGGAAGTGTTTGCATCAGTAACTTTTAGTATGATCTTCATCAAATAGAAATTAGAACTTTAAATAAGATATTTATGTGCCTTCCCGATTTTGCTTCCTTCGAACTTGTTTCCTTTTCTTGCTAATCTAAAACATTTGATACCTTATGAGTTCCTTATATTGAAGATTGATAGATGTAACTTATAATTTCTTAGCCAGTTTGGCGAGATCTACCAGGAGGAGCATTTCATTGACTACCTGAAACCTGATATTCGTATAGTTAGAGAACTTCCTCAGGAGTTGCAGTCATTAGATCTAGAGGCCATTGGCAGTTTGGTAAGACTCTCATCTAGATAAATCATTTTGAATATGATCATGTGAAGAAACTAGTTTCTGACAATCTTGAAATAAATCCAGGTGACAGATGCAGATGTTGTAAAAGAAGCAAAGCCAGGTTTCTACAAGAAATATATTCTTCCTATTTTACATAAAAACGGAGTTGTTCATTTTCTTGGATTTGGGAATCGATTGGCATCTGACCCGTTACCACCTCAGGTGCAGGTAAACCCATCGAACTTGATATTAGGCTTCCTTGTTGATTTCTCAATTTTTCATATTATCTTCTCATTTAGTCTGATTCCATAATTTCTACCTTGGTTCCTGATTTGGGGACTTCATCTAGAGACTTCGATGCAGATGTAATTTTCATGCTCTGAAATTTGTTCCAAAGATAGAAGAAACTGGAGCTTTACTTATACGGAGA</genome_strand>
        <mrna_strand>AAGAACCAAAAAAGAGAAGCAAACCTTTAAAAGATAAAAAAATTCTATGACTTCTCGGAGCAATTCTTTTTCTAATTTCTCAGAATCATCGTACGAATACGATGATAAGGATTGTTCCACCGTCACGACTTCGGATCGGGATGAGCCCCTGAATCCGGGTCATAGGAACAACTCGTTTAACGGGTTATTGGGTTTCACGTTCGGGTCCAAGAAGATGAGGAAGAAGAAACCCTTTTGTCAGGAAAAAGCAATTGTCGGGTTGGCTCTATTGGTGATCGGTTTTGTCGGGATGAATTGGTGGATGCTTTCCCGGATCCAGAACTCGGGTCGGGCTTCTCAGGTTGAGTTCAGGTTCTTGGAAGATAATTCCTCCACTCTATCAATTCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAACTGCTAAGGCTTGGGCTTGGCGAAGAGAGAAAGCCTCAGAAAACAATCTACGCACGATTGCTGGCTAAAGCTGCTCATTCCTTAGCTGAG................................................................................GGACAGAAAAAATCCGAGCCAAAAGATTTGTGGGCTGAACCGTATTTTGTTGCTTCCTCTTGGAAACCTTGTGCTGAGCAGCGTCAATGGCTACCTAGTG.....................................................................................AGGGAAAAAATGGTTACATTATTGTCACTGCAAATGGTGGGATAAATCAGCAGCGAGTAGCT.................................................................................................................................................GTCTGCAATATTGTTGCTATTGCAAGATTACTCGATGCAACCTTGGTTCTTCCGAAATTTCTGTACAGTAGTGTTTGGAAAGATGTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGTTTGGCGAGATCTACCAGGAGGAGCATTTCATTGACTACCTGAAACCTGATATTCGTATAGTTAGAGAACTTCCTCAGGAGTTGCAGTCATTAGATCTAGAGGCCATTGGCAGTTTG.................................................................................GTGACAGATGCAGATGTTGTAAAAGAAGCAAAGCCAGGTTTCTACAAGAAATATATTCTTCCTATTTTACATAAAAACGGAGTTGTTCATTTTCTTGGATTTGGGAATCGATTGGCATCTGACCCGTTACCACCTCAGGTGCAGGTAAACCCATCGAACTTGATATTAGGCTTCCTTGTTGATTTCTCAATTTTTCATATTATCTTCTCATTTAGTCTGATTCCATAATTTCTACCTTGGTTCCTGATTTGGGGACTTCATCTAGAGACTTCGATGCAGATGTAATTTTCATGCTCTGAAATTTGTTCCAAAGATAGAAGAAACTGGAGCTTTACTTATACGGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>26</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="6054" PGL_stop="6757"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6054" e_stop="6757"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="6054" e_stop="6757" e_length="704"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6054" stop="6757"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566464" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAGTGAAAGGTATATAAAGCAAAAACCAACAGCAAAGATTCTCCATAAACACTTTCCCAATGCTACAGTTTTCCTTAACTATACAAAATCTTGGTAGAGAAAATCTTCAAGCAAATCTCACATGGCCATTTCAAATTTGTCCATCTTTATTATTTTCCTTGTACTTCAATTTCTATGCATAACAGAAGCTCAATCAAGCATTTGTAGAAATTCTTGTGGCGATATCCCAATTCAGTATCCTTTTGGCATTGATGATGGCTGTGGAAGTCCATTTTATCGACACATTCTTGTATGCACTGGTGGTCAGCTTCAACTCAGAACCCCTTCTGGTAGATATCCTGTTAGAAATTTGAGTTATATGGATCCACATATTCTTGTGACCGATCCCTTAATGTGGAATTGTCTAGATGGTGACAATTTTCGACCTACCAGGCCGTTTAGCCTAGATACTAGCACACATTTCACTTTGTCCTCTGAAAATGACTACTTGTTCTTTAATTGTAGTGAAAGTGATGTGTTAGTTGAGCCAAAACCAATGTTCTGCGAGCGTTTCCCTGATCAGTGTGATTCAACTTGTGATAGTTCGAGTTATCTTTGTAGGCACATGCCTGAATGTCCTACTGCTTTGAGGAGTAGCTCTTGTTGTTCTTACTATCCCAAAGCTACTGAATCTTTGAGGCTGATGTTGAAGCATTGTGCAAG</gDNA_template>
            <first_frame> K  S  E  R  Y  I  K  Q  K  P  T  A  K  I  L  H  K  H  F  P  N  A  T  V  F  L  N  Y  T  K  S  W  *  R  K  S  S  S  K  S  H  M  A  I  S  N  L  S  I  F  I  I  F  L  V  L  Q  F  L  C  I  T  E  A  Q  S  S  I  C  R  N  S  C  G  D  I  P  I  Q  Y  P  F  G  I  D  D  G  C  G  S  P  F  Y  R  H  I  L  V  C  T  G  G  Q  L  Q  L  R  T  P  S  G  R  Y  P  V  R  N  L  S  Y  M  D  P  H  I  L  V  T  D  P  L  M  W  N  C  L  D  G  D  N  F  R  P  T  R  P  F  S  L  D  T  S  T  H  F  T  L  S  S  E  N  D  Y  L  F  F  N  C  S  E  S  D  V  L  V  E  P  K  P  M  F  C  E  R  F  P  D  Q  C  D  S  T  C  D  S  S  S  Y  L  C  R  H  M  P  E  C  P  T  A  L  R  S  S  S  C  C  S  Y  Y  P  K  A  T  E  S  L  R  L  M  L  K  H  C  A   </first_frame>
            <second_frame>  K  V  K  G  I  *  S  K  N  Q  Q  Q  R  F  S  I  N  T  F  P  M  L  Q  F  S  L  T  I  Q  N  L  G  R  E  N  L  Q  A  N  L  T  W  P  F  Q  I  C  P  S  L  L  F  S  L  Y  F  N  F  Y  A  *  Q  K  L  N  Q  A  F  V  E  I  L  V  A  I  S  Q  F  S  I  L  L  A  L  M  M  A  V  E  V  H  F  I  D  T  F  L  Y  A  L  V  V  S  F  N  S  E  P  L  L  V  D  I  L  L  E  I  *  V  I  W  I  H  I  F  L  *  P  I  P  *  C  G  I  V  *  M  V  T  I  F  D  L  P  G  R  L  A  *  I  L  A  H  I  S  L  C  P  L  K  M  T  T  C  S  L  I  V  V  K  V  M  C  *  L  S  Q  N  Q  C  S  A  S  V  S  L  I  S  V  I  Q  L  V  I  V  R  V  I  F  V  G  T  C  L  N  V  L  L  L  *  G  V  A  L  V  V  L  T  I  P  K  L  L  N  L  *  G  *  C  *  S  I  V  Q  </second_frame>
            <third_frame>   K  *  K  V  Y  K  A  K  T  N  S  K  D  S  P  *  T  L  S  Q  C  Y  S  F  P  *  L  Y  K  I  L  V  E  K  I  F  K  Q  I  S  H  G  H  F  K  F  V  H  L  Y  Y  F  P  C  T  S  I  S  M  H  N  R  S  S  I  K  H  L  *  K  F  L  W  R  Y  P  N  S  V  S  F  W  H  *  *  W  L  W  K  S  I  L  S  T  H  S  C  M  H  W  W  S  A  S  T  Q  N  P  F  W  *  I  S  C  *  K  F  E  L  Y  G  S  T  Y  S  C  D  R  S  L  N  V  E  L  S  R  W  *  Q  F  S  T  Y  Q  A  V  *  P  R  Y  *  H  T  F  H  F  V  L  *  K  *  L  L  V  L  *  L  *  *  K  *  C  V  S  *  A  K  T  N  V  L  R  A  F  P  *  S  V  *  F  N  L  *  *  F  E  L  S  L  *  A  H  A  *  M  S  Y  C  F  E  E  *  L  L  L  F  L  L  S  Q  S  Y  *  I  F  E  A  D  V  E  A  L  C  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6153" stop="6755"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>603</number_coding_nucleotides>
                  <number_encoded_amino_acids>201</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKSSSKSHMAISNLSIFIIFLVLQFLCITEAQSSICRNSCGDIPIQYPFGIDDGCGSPFYRHILVCTGGQLQLRTPSGRYPVRNLSYMDPHILVTDPLMWNCLDGDNFRPTRPFSLDTSTHFTLSSENDYLFFNCSESDVLVEPKPMFCERFPDQCDSTCDSSSYLCRHMPECPTALRSSSCCSYYPKATESLRLMLKHCA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="8355" PGL_stop="7859"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8355" e_stop="7859"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="8355" e_stop="7859" e_length="497"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8355" stop="7859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582348" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAGGAAATTATTTCATTGCTCCTGACAAAGCTTACAACAAAGAGGTATACTAACATCAAACTACCTGTTCTCAAATTGGAAATCACAAAAAAAAACAACTTATACTAATGTCATCGCCATCGTTATGTTACAGGTTACCAAGAGGGAGACTGAAGAAAAAGGATGGAAGAGTTGGAAATGGAGATCCTCCAATGATATGTTTATGAATGGAGCTTATTTTCTTCCATCTGGATATGGAAGTATTGCTCCAAAATACACGAGAGGACAATCGTTCATTGTTGCTCACGGAGCATTTACTCCCTCTTTAACTTCCAATGCTGGTCCTCTTCAATGTGTTGTCAATGAACCTTGCTAAATGCTGATACAAAATTTCCTTCTTTCCTTTTCCTATCATCAGCATGCCCTGTTATCTTCGACAGGATTTTTTAATGTCTTGACATGTCTAATTTATACTTCGCGAATACATAGTTAGCTTGAAAGATTCAGGCTTTAGGAG</gDNA_template>
            <first_frame> E  G  N  Y  F  I  A  P  D  K  A  Y  N  K  E  V  Y  *  H  Q  T  T  C  S  Q  I  G  N  H  K  K  K  Q  L  I  L  M  S  S  P  S  L  C  Y  R  L  P  R  G  R  L  K  K  K  D  G  R  V  G  N  G  D  P  P  M  I  C  L  *  M  E  L  I  F  F  H  L  D  M  E  V  L  L  Q  N  T  R  E  D  N  R  S  L  L  L  T  E  H  L  L  P  L  *  L  P  M  L  V  L  F  N  V  L  S  M  N  L  A  K  C  *  Y  K  I  S  F  F  P  F  P  I  I  S  M  P  C  Y  L  R  Q  D  F  L  M  S  *  H  V  *  F  I  L  R  E  Y  I  V  S  L  K  D  S  G  F  R   </first_frame>
            <second_frame>  K  E  I  I  S  L  L  L  T  K  L  T  T  K  R  Y  T  N  I  K  L  P  V  L  K  L  E  I  T  K  K  N  N  L  Y  *  C  H  R  H  R  Y  V  T  G  Y  Q  E  G  D  *  R  K  R  M  E  E  L  E  M  E  I  L  Q  *  Y  V  Y  E  W  S  L  F  S  S  I  W  I  W  K  Y  C  S  K  I  H  E  R  T  I  V  H  C  C  S  R  S  I  Y  S  L  F  N  F  Q  C  W  S  S  S  M  C  C  Q  *  T  L  L  N  A  D  T  K  F  P  S  F  L  F  L  S  S  A  C  P  V  I  F  D  R  I  F  *  C  L  D  M  S  N  L  Y  F  A  N  T  *  L  A  *  K  I  Q  A  L  G  </second_frame>
            <third_frame>   R  K  L  F  H  C  S  *  Q  S  L  Q  Q  R  G  I  L  T  S  N  Y  L  F  S  N  W  K  S  Q  K  K  T  T  Y  T  N  V  I  A  I  V  M  L  Q  V  T  K  R  E  T  E  E  K  G  W  K  S  W  K  W  R  S  S  N  D  M  F  M  N  G  A  Y  F  L  P  S  G  Y  G  S  I  A  P  K  Y  T  R  G  Q  S  F  I  V  A  H  G  A  F  T  P  S  L  T  S  N  A  G  P  L  Q  C  V  V  N  E  P  C  *  M  L  I  Q  N  F  L  L  S  F  S  Y  H  Q  H  A  L  L  S  S  T  G  F  F  N  V  L  T  C  L  I  Y  T  S  R  I  H  S  *  L  E  R  F  R  L  *  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8329" stop="8000"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>327</number_coding_nucleotides>
                  <number_encoded_amino_acids>109</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QSLQQRGILTSNYLFSNWKSQKKTTYTNVIAIVMLQVTKRETEEKGWKSWKWRSSNDMFMNGAYFLPSGYGSIAPKYTRGQSFIVAHGAFTPSLTSNAGPLQCVVNEPC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="16412" PGL_stop="15710"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16412" e_stop="15710"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="16412" e_stop="15710" e_length="703"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16412" stop="15710"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585954" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCCAAACATTTAATTTCTCTCAATATTTCATCTCATAATATCACAAGTATTAGCCATGAATAGCTTGAAAATTTTCTTTTTGCTAGCCATTATAATGGCCTCATTCACTATACTTTCAGTAGCGTCATCAGCTAATGAATTAGAAGAAAAAATGCCGGTAAAAAATAAGAATATGGTTGAATCATTTGAAGTTCCTTTGAATGAAACTGAAGAAAGTTCATCATCTATTCAACGGTTTCTAGGACATAAATCACCTTATTATTACAAGTCTAAAATCATACAAAAACGTATGAGTACATGTAACAAGAACCCTAGAATATGTCGTGCTAAAGGTAGCCCAGGGCCATTTTGCTGCAAGAAGAAGTGTGTAAACGTGTTTGTAGACAGGCAAAACTGTGGATATTGTGGGAAGAAATGCAGGTATAATGAGACTTGTTGCAATGGGCAGTGTGTTAACACTTTGTTTCATAAGAGGCATTGTGGTGGTTGCGGTAACAAGTGCCAACAAGGAAGTTATTGTGTCTATGGAATGTGCAGCTATGCAAATTAATTAGAGGTTATTATAAGGACAATTCAATTATTTATTTGGTTCTACAAATTATTTTACTGTTTAATTTAATTAAATTTGATTGTAGGCAGTGATTCCTTTTATTGTGTATCAAAAAGATTATAATGACAACATGAATGAAATCATATGAGATT</gDNA_template>
            <first_frame> I  Q  T  F  N  F  S  Q  Y  F  I  S  *  Y  H  K  Y  *  P  *  I  A  *  K  F  S  F  C  *  P  L  *  W  P  H  S  L  Y  F  Q  *  R  H  Q  L  M  N  *  K  K  K  C  R  *  K  I  R  I  W  L  N  H  L  K  F  L  *  M  K  L  K  K  V  H  H  L  F  N  G  F  *  D  I  N  H  L  I  I  T  S  L  K  S  Y  K  N  V  *  V  H  V  T  R  T  L  E  Y  V  V  L  K  V  A  Q  G  H  F  A  A  R  R  S  V  *  T  C  L  *  T  G  K  T  V  D  I  V  G  R  N  A  G  I  M  R  L  V  A  M  G  S  V  L  T  L  C  F  I  R  G  I  V  V  V  A  V  T  S  A  N  K  E  V  I  V  S  M  E  C  A  A  M  Q  I  N  *  R  L  L  *  G  Q  F  N  Y  L  F  G  S  T  N  Y  F  T  V  *  F  N  *  I  *  L  *  A  V  I  P  F  I  V  Y  Q  K  D  Y  N  D  N  M  N  E  I  I  *  D  </first_frame>
            <second_frame>  S  K  H  L  I  S  L  N  I  S  S  H  N  I  T  S  I  S  H  E  *  L  E  N  F  L  F  A  S  H  Y  N  G  L  I  H  Y  T  F  S  S  V  I  S  *  *  I  R  R  K  N  A  G  K  K  *  E  Y  G  *  I  I  *  S  S  F  E  *  N  *  R  K  F  I  I  Y  S  T  V  S  R  T  *  I  T  L  L  L  Q  V  *  N  H  T  K  T  Y  E  Y  M  *  Q  E  P  *  N  M  S  C  *  R  *  P  R  A  I  L  L  Q  E  E  V  C  K  R  V  C  R  Q  A  K  L  W  I  L  W  E  E  M  Q  V  *  *  D  L  L  Q  W  A  V  C  *  H  F  V  S  *  E  A  L  W  W  L  R  *  Q  V  P  T  R  K  L  L  C  L  W  N  V  Q  L  C  K  L  I  R  G  Y  Y  K  D  N  S  I  I  Y  L  V  L  Q  I  I  L  L  F  N  L  I  K  F  D  C  R  Q  *  F  L  L  L  C  I  K  K  I  I  M  T  T  *  M  K  S  Y  E  I </second_frame>
            <third_frame>   P  N  I  *  F  L  S  I  F  H  L  I  I  S  Q  V  L  A  M  N  S  L  K  I  F  F  L  L  A  I  I  M  A  S  F  T  I  L  S  V  A  S  S  A  N  E  L  E  E  K  M  P  V  K  N  K  N  M  V  E  S  F  E  V  P  L  N  E  T  E  E  S  S  S  S  I  Q  R  F  L  G  H  K  S  P  Y  Y  Y  K  S  K  I  I  Q  K  R  M  S  T  C  N  K  N  P  R  I  C  R  A  K  G  S  P  G  P  F  C  C  K  K  K  C  V  N  V  F  V  D  R  Q  N  C  G  Y  C  G  K  K  C  R  Y  N  E  T  C  C  N  G  Q  C  V  N  T  L  F  H  K  R  H  C  G  G  C  G  N  K  C  Q  Q  G  S  Y  C  V  Y  G  M  C  S  Y  A  N  *  L  E  V  I  I  R  T  I  Q  L  F  I  W  F  Y  K  L  F  Y  C  L  I  *  L  N  L  I  V  G  S  D  S  F  Y  C  V  S  K  R  L  *  *  Q  H  E  *  N  H  M  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16398" stop="15862"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>534</number_coding_nucleotides>
                  <number_encoded_amino_acids>178</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLSIFHLIISQVLAMNSLKIFFLLAIIMASFTILSVASSANELEEKMPVKNKNMVESFEVPLNETEESSSSIQRFLGHKSPYYYKSKIIQKRMSTCNKNPRICRAKGSPGPFCCKKKCVNVFVDRQNCGYCGKKCRYNETCCNGQCVNTLFHKRHCGGCGNKCQQGSYCVYGMCSYAN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="20860" PGL_stop="20145"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="20860" e_stop="20145"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="20860" e_stop="20145" e_length="716"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20860" stop="20145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588891" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTCTATATTTTGCATTCTAATATATTTCATCCAATTTACAAGAAGCCATGAATTGCATGAAAATTTTCATATTTTTAGCCATTATAATGGCTATATTTTCAGTAGCCTCATCAGTCGATGAATTAGAAGAAGAAATACTCGCAAAAGATGAGAATGAAGTTGAATCATTTGAAGTTCCTTTGAATGAAACTGATGAAAGTTCATCATCATCCATTATTCGAGGGGCTAGTCGTTTTCTTCTATCACATCATCACAAGTCGAAAACAATACATAAACGTATGACATGTAACAAGAACCCTAGAATATGTCGTTCCAAAGGTAGCCCGGGGTCCTTTTGCTGCAAGAAGAAGTGTGTAAACGTGTTGGCTGACAGGCAAAACTGTGGATTATGTGGGAAGAAATGCAGGTATAATGAGACTTGTTGTAGAGGGAAGTGTGTTAACACTTTGTTTCACAAGAAGCATTGTGGGGGTTGCGGTAACAAGTGCCAGCAAGGAAGTTCTTGTGTCTATGGAATGTGCAGCTATGCAAATTAAAGGACAATAAATTATTTATTTGGCTGATGTTCAAATTATAGTATTTGATTTGTAGGCAATGATTCCTTTTATTGCGTAGCAAATAAAGGATATGCCACATCATAAGTTGTTTAATTTGTTTCATTTTTTTTTTACAAAAATTGTACACCTTGTTATACGTAGATGACTAGAAGTGTTTC</gDNA_template>
            <first_frame> S  L  Y  F  A  F  *  Y  I  S  S  N  L  Q  E  A  M  N  C  M  K  I  F  I  F  L  A  I  I  M  A  I  F  S  V  A  S  S  V  D  E  L  E  E  E  I  L  A  K  D  E  N  E  V  E  S  F  E  V  P  L  N  E  T  D  E  S  S  S  S  S  I  I  R  G  A  S  R  F  L  L  S  H  H  H  K  S  K  T  I  H  K  R  M  T  C  N  K  N  P  R  I  C  R  S  K  G  S  P  G  S  F  C  C  K  K  K  C  V  N  V  L  A  D  R  Q  N  C  G  L  C  G  K  K  C  R  Y  N  E  T  C  C  R  G  K  C  V  N  T  L  F  H  K  K  H  C  G  G  C  G  N  K  C  Q  Q  G  S  S  C  V  Y  G  M  C  S  Y  A  N  *  R  T  I  N  Y  L  F  G  *  C  S  N  Y  S  I  *  F  V  G  N  D  S  F  Y  C  V  A  N  K  G  Y  A  T  S  *  V  V  *  F  V  S  F  F  F  Y  K  N  C  T  P  C  Y  T  *  M  T  R  S  V   </first_frame>
            <second_frame>  L  Y  I  L  H  S  N  I  F  H  P  I  Y  K  K  P  *  I  A  *  K  F  S  Y  F  *  P  L  *  W  L  Y  F  Q  *  P  H  Q  S  M  N  *  K  K  K  Y  S  Q  K  M  R  M  K  L  N  H  L  K  F  L  *  M  K  L  M  K  V  H  H  H  P  L  F  E  G  L  V  V  F  F  Y  H  I  I  T  S  R  K  Q  Y  I  N  V  *  H  V  T  R  T  L  E  Y  V  V  P  K  V  A  R  G  P  F  A  A  R  R  S  V  *  T  C  W  L  T  G  K  T  V  D  Y  V  G  R  N  A  G  I  M  R  L  V  V  E  G  S  V  L  T  L  C  F  T  R  S  I  V  G  V  A  V  T  S  A  S  K  E  V  L  V  S  M  E  C  A  A  M  Q  I  K  G  Q  *  I  I  Y  L  A  D  V  Q  I  I  V  F  D  L  *  A  M  I  P  F  I  A  *  Q  I  K  D  M  P  H  H  K  L  F  N  L  F  H  F  F  F  T  K  I  V  H  L  V  I  R  R  *  L  E  V  F  </second_frame>
            <third_frame>   S  I  F  C  I  L  I  Y  F  I  Q  F  T  R  S  H  E  L  H  E  N  F  H  I  F  S  H  Y  N  G  Y  I  F  S  S  L  I  S  R  *  I  R  R  R  N  T  R  K  R  *  E  *  S  *  I  I  *  S  S  F  E  *  N  *  *  K  F  I  I  I  H  Y  S  R  G  *  S  F  S  S  I  T  S  S  Q  V  E  N  N  T  *  T  Y  D  M  *  Q  E  P  *  N  M  S  F  Q  R  *  P  G  V  L  L  L  Q  E  E  V  C  K  R  V  G  *  Q  A  K  L  W  I  M  W  E  E  M  Q  V  *  *  D  L  L  *  R  E  V  C  *  H  F  V  S  Q  E  A  L  W  G  L  R  *  Q  V  P  A  R  K  F  L  C  L  W  N  V  Q  L  C  K  L  K  D  N  K  L  F  I  W  L  M  F  K  L  *  Y  L  I  C  R  Q  *  F  L  L  L  R  S  K  *  R  I  C  H  I  I  S  C  L  I  C  F  I  F  F  L  Q  K  L  Y  T  L  L  Y  V  D  D  *  K  C  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20839" stop="20324"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>513</number_coding_nucleotides>
                  <number_encoded_amino_acids>171</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YISSNLQEAMNCMKIFIFLAIIMAIFSVASSVDELEEEILAKDENEVESFEVPLNETDESSSSSIIRGASRFLLSHHHKSKTIHKRMTCNKNPRICRSKGSPGSFCCKKKCVNVLADRQNCGLCGKKCRYNETCCRGKCVNTLFHKKHCGGCGNKCQQGSSCVYGMCSYAN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="25350" PGL_stop="29778"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25350" e_stop="25671"/>
            <exon e_start="26594" e_stop="26660"/>
            <exon e_start="27138" e_stop="27184"/>
            <exon e_start="27823" e_stop="27910"/>
            <exon e_start="28023" e_stop="28156"/>
            <exon e_start="28251" e_stop="28349"/>
            <exon e_start="29321" e_stop="29778"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.983" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.190" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.716" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.587" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="25350" e_stop="25671" e_length="322"/>
          </exon>
          <intron i_serial="1" don_prob="0.983" acc_prob="0.995">
            <gDNA_intron_boundary i_start="25672" i_stop="26593" i_length="922"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="26594" e_stop="26660" e_length="67"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.998">
            <gDNA_intron_boundary i_start="26661" i_stop="27137" i_length="477"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="27138" e_stop="27184" e_length="47"/>
          </exon>
          <intron i_serial="3" don_prob="0.983" acc_prob="1.000">
            <gDNA_intron_boundary i_start="27185" i_stop="27822" i_length="638"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="27823" e_stop="27910" e_length="88"/>
          </exon>
          <intron i_serial="4" don_prob="0.190" acc_prob="0.999">
            <gDNA_intron_boundary i_start="27911" i_stop="28022" i_length="112"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="28023" e_stop="28156" e_length="134"/>
          </exon>
          <intron i_serial="5" don_prob="0.716" acc_prob="0.989">
            <gDNA_intron_boundary i_start="28157" i_stop="28250" i_length="94"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="28251" e_stop="28349" e_length="99"/>
          </exon>
          <intron i_serial="6" don_prob="0.587" acc_prob="0.999">
            <gDNA_intron_boundary i_start="28350" i_stop="29320" i_length="971"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="29321" e_stop="29778" e_length="458"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25350" stop="25671"/>
              <exon start="26594" stop="26660"/>
              <exon start="27138" stop="27184"/>
              <exon start="27823" stop="27910"/>
              <exon start="28023" stop="28156"/>
              <exon start="28251" stop="28349"/>
              <exon start="29321" stop="29778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566609" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GACCAATCTAGAAAAATCAGTGGACGAGGAAACAACAAAAGGCGAGAAAAAAGATTCATTAAGTGCAGTGCTGGAGACGGAACCGTCAGATTCAGGAATGGCTGCTGCTTCCGCTACGGATGGTGTCGCTGCGACGGCAGTACGGTCGGTAATTCAGCGGATTGAACACGTGGCTGAACGATGTGGCCGCAGATCGGACCAAGTAAGGCTGGTGGCTGTAAGCAAAACTAAGCCAGTATCTCTCCTCAAACAAGTTTACGACGCCGGTCATCGTTGTTTCGGTGAAAATTACGTCAAAGAGCTCATTGAGAAAGCTCCTCAG : CTTCCAGATGATATAGAGTGGCATTTCATAGGGAATTTGCAGAGCAATAAAGTCAAGCCACTTTTAA : CTGGAGTGCCAAATCTTGCTATGGTGGAGACAGTAGATGATGAAAAG : ATTGCAAATCAGCTTGACCGTGTGGCTGCGAACATTGGAAGAAAGCCATTGAAAGTTTTTATCCAAGTTAATACAAGCGGGGAAGAAA : CTAAATCTGGTGTTGAACCAGATGGGTGTCTGGAACTCGTGAAACATGTTACTTCAAACTGCCCTAATCTTGAATTCTGTGGCTTGATGACTATTGGAATGCCAGATTATACATCGACTCCTGAAAACTTTAAG : ACTTTAGCAAAATGTAGAAGTGAAGTTTGCGAGGCACTTGGAATATCTGAAGATCAATGTGAGCTGTCAATGGGCATGTCAGGCGACTTTGAACTTGCT : GTTGAGATGGGCAGTACAAATGTTCGAGTTGGATCTACTATATTTGGTGCAAGGGAATATCCAACGAAGTAGTCATCGAACTAGGTTGATGAACCCAGTTTAGTGAAGAGAGCTTGAGCCAAACATGTACCTTAAGATTTTGCAGCTTCATGTCGGAATATGAGTGTTTGTACGATGCCACTATGGACCTCATTGGCTATGTGGCTACAATATCCTGTCTGTATTCTATCTATTATTACTGCTGAACATAGTCTTGACTCTTGAGCTGCGATCTCGATGTTCAATAGTATTTTGGGATTTGATAGACTCTCGTCTAGATGTACTAATTGATGATAATCTGTGAGAATACTTTTGGTCCGTGGATCTTCTTTTTTGATAGAACGACTAAACTATGCAGGGCAGCTAACAGTCGTAACTTGTGCAAACATGAGTTATGTATTATTTAAGTCATAAAATTA</gDNA_template>
            <first_frame> D  Q  S  R  K  I  S  G  R  G  N  N  K  R  R  E  K  R  F  I  K  C  S  A  G  D  G  T  V  R  F  R  N  G  C  C  F  R  Y  G  W  C  R  C  D  G  S  T  V  G  N  S  A  D  *  T  R  G  *  T  M  W  P  Q  I  G  P  S  K  A  G  G  C  K  Q  N  *  A  S  I  S  P  Q  T  S  L  R  R  R  S  S  L  F  R  *  K  L  R  Q  R  A  H  *  E  S  S  S   : A  S  R  *  Y  R  V  A  F  H  R  E  F  A  E  Q  *  S  Q  A  T  F  N :   W  S  A  K  S  C  Y  G  G  D  S  R  *  *  K   : D  C  K  S  A  *  P  C  G  C  E  H  W  K  K  A  I  E  S  F  Y  P  S  *  Y  K  R  G  R  N :   *  I  W  C  *  T  R  W  V  S  G  T  R  E  T  C  Y  F  K  L  P  *  S  *  I  L  W  L  D  D  Y  W  N  A  R  L  Y  I  D  S  *  K  L  *   : D  F  S  K  M  *  K  *  S  L  R  G  T  W  N  I  *  R  S  M  *  A  V  N  G  H  V  R  R  L  *  T  C   : C  *  D  G  Q  Y  K  C  S  S  W  I  Y  Y  I  W  C  K  G  I  S  N  E  V  V  I  E  L  G  *  *  T  Q  F  S  E  E  S  L  S  Q  T  C  T  L  R  F  C  S  F  M  S  E  Y  E  C  L  Y  D  A  T  M  D  L  I  G  Y  V  A  T  I  S  C  L  Y  S  I  Y  Y  Y  C  *  T  *  S  *  L  L  S  C  D  L  D  V  Q  *  Y  F  G  I  *  *  T  L  V  *  M  Y  *  L  M  I  I  C  E  N  T  F  G  P  W  I  F  F  F  D  R  T  T  K  L  C  R  A  A  N  S  R  N  L  C  K  H  E  L  C  I  I  *  V  I  K  L </first_frame>
            <second_frame>  T  N  L  E  K  S  V  D  E  E  T  T  K  G  E  K  K  D  S  L  S  A  V  L  E  T  E  P  S  D  S  G  M  A  A  A  S  A  T  D  G  V  A  A  T  A  V  R  S  V  I  Q  R  I  E  H  V  A  E  R  C  G  R  R  S  D  Q  V  R  L  V  A  V  S  K  T  K  P  V  S  L  L  K  Q  V  Y  D  A  G  H  R  C  F  G  E  N  Y  V  K  E  L  I  E  K  A  P  Q  :  L  P  D  D  I  E  W  H  F  I  G  N  L  Q  S  N  K  V  K  P  L  L   : T  G  V  P  N  L  A  M  V  E  T  V  D  D  E  K  :  I  A  N  Q  L  D  R  V  A  A  N  I  G  R  K  P  L  K  V  F  I  Q  V  N  T  S  G  E  E   : T  K  S  G  V  E  P  D  G  C  L  E  L  V  K  H  V  T  S  N  C  P  N  L  E  F  C  G  L  M  T  I  G  M  P  D  Y  T  S  T  P  E  N  F  K  :  T  L  A  K  C  R  S  E  V  C  E  A  L  G  I  S  E  D  Q  C  E  L  S  M  G  M  S  G  D  F  E  L  A  :  V  E  M  G  S  T  N  V  R  V  G  S  T  I  F  G  A  R  E  Y  P  T  K  *  S  S  N  *  V  D  E  P  S  L  V  K  R  A  *  A  K  H  V  P  *  D  F  A  A  S  C  R  N  M  S  V  C  T  M  P  L  W  T  S  L  A  M  W  L  Q  Y  P  V  C  I  L  S  I  I  T  A  E  H  S  L  D  S  *  A  A  I  S  M  F  N  S  I  L  G  F  D  R  L  S  S  R  C  T  N  *  *  *  S  V  R  I  L  L  V  R  G  S  S  F  L  I  E  R  L  N  Y  A  G  Q  L  T  V  V  T  C  A  N  M  S  Y  V  L  F  K  S  *  N   </second_frame>
            <third_frame>   P  I  *  K  N  Q  W  T  R  K  Q  Q  K  A  R  K  K  I  H  *  V  Q  C  W  R  R  N  R  Q  I  Q  E  W  L  L  L  P  L  R  M  V  S  L  R  R  Q  Y  G  R  *  F  S  G  L  N  T  W  L  N  D  V  A  A  D  R  T  K  *  G  W  W  L  *  A  K  L  S  Q  Y  L  S  S  N  K  F  T  T  P  V  I  V  V  S  V  K  I  T  S  K  S  S  L  R  K  L  L  S :   F  Q  M  I  *  S  G  I  S  *  G  I  C  R  A  I  K  S  S  H  F  *  :  L  E  C  Q  I  L  L  W  W  R  Q  *  M  M  K  R :   L  Q  I  S  L  T  V  W  L  R  T  L  E  E  S  H  *  K  F  L  S  K  L  I  Q  A  G  K  K  :  L  N  L  V  L  N  Q  M  G  V  W  N  S  *  N  M  L  L  Q  T  A  L  I  L  N  S  V  A  *  *  L  L  E  C  Q  I  I  H  R  L  L  K  T  L  R :   L  *  Q  N  V  E  V  K  F  A  R  H  L  E  Y  L  K  I  N  V  S  C  Q  W  A  C  Q  A  T  L  N  L  L :   L  R  W  A  V  Q  M  F  E  L  D  L  L  Y  L  V  Q  G  N  I  Q  R  S  S  H  R  T  R  L  M  N  P  V  *  *  R  E  L  E  P  N  M  Y  L  K  I  L  Q  L  H  V  G  I  *  V  F  V  R  C  H  Y  G  P  H  W  L  C  G  Y  N  I  L  S  V  F  Y  L  L  L  L  L  N  I  V  L  T  L  E  L  R  S  R  C  S  I  V  F  W  D  L  I  D  S  R  L  D  V  L  I  D  D  N  L  *  E  Y  F  W  S  V  D  L  L  F  *  *  N  D  *  T  M  Q  G  S  *  Q  S  *  L  V  Q  T  *  V  M  Y  Y  L  S  H  K  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25351" stop="25671"/>
                    <exon start="26594" stop="26660"/>
                    <exon start="27138" stop="27184"/>
                    <exon start="27823" stop="27910"/>
                    <exon start="28023" stop="28156"/>
                    <exon start="28251" stop="28349"/>
                    <exon start="29321" stop="29392"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>825</number_coding_nucleotides>
                  <number_encoded_amino_acids>275</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TNLEKSVDEETTKGEKKDSLSAVLETEPSDSGMAAASATDGVAATAVRSVIQRIEHVAERCGRRSDQVRLVAVSKTKPVSLLKQVYDAGHRCFGENYVKELIEKAPQLPDDIEWHFIGNLQSNKVKPLLTGVPNLAMVETVDDEKIANQLDRVAANIGRKPLKVFIQVNTSGEETKSGVEPDGCLELVKHVTSNCPNLEFCGLMTIGMPDYTSTPENFKTLAKCRSEVCEALGISEDQCELSMGMSGDFELAVEMGSTNVRVGSTIFGAREYPTK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="41486" PGL_stop="35436"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41486" e_stop="41039"/>
            <exon e_start="40766" e_stop="40650"/>
            <exon e_start="39947" e_stop="39847"/>
            <exon e_start="38890" e_stop="38819"/>
            <exon e_start="38610" e_stop="38529"/>
            <exon e_start="37313" e_stop="37233"/>
            <exon e_start="36911" e_stop="36757"/>
            <exon e_start="36628" e_stop="36569"/>
            <exon e_start="36296" e_stop="36150"/>
            <exon e_start="35802" e_stop="35436"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="0.998" e_score="0.998"/>
          <exon-intron don_prob="0.999" acc_prob="0.156" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.880" acc_prob="0.920" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.927" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="41486" e_stop="41039" e_length="448"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="0.998">
            <gDNA_intron_boundary i_start="41038" i_stop="40767" i_length="272"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="40766" e_stop="40650" e_length="117"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.156">
            <gDNA_intron_boundary i_start="40649" i_stop="39948" i_length="702"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="39947" e_stop="39847" e_length="101"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.953">
            <gDNA_intron_boundary i_start="39846" i_stop="38891" i_length="956"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="38890" e_stop="38819" e_length="72"/>
          </exon>
          <intron i_serial="4" don_prob="0.880" acc_prob="0.920">
            <gDNA_intron_boundary i_start="38818" i_stop="38611" i_length="208"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="38610" e_stop="38529" e_length="82"/>
          </exon>
          <intron i_serial="5" don_prob="0.986" acc_prob="0.927">
            <gDNA_intron_boundary i_start="38528" i_stop="37314" i_length="1215"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="37313" e_stop="37233" e_length="81"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.973">
            <gDNA_intron_boundary i_start="37232" i_stop="36912" i_length="321"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="36911" e_stop="36757" e_length="155"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.986">
            <gDNA_intron_boundary i_start="36756" i_stop="36629" i_length="128"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="36628" e_stop="36569" e_length="60"/>
          </exon>
          <intron i_serial="8" don_prob="0.991" acc_prob="0.990">
            <gDNA_intron_boundary i_start="36568" i_stop="36297" i_length="272"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="36296" e_stop="36150" e_length="147"/>
          </exon>
          <intron i_serial="9" don_prob="0.976" acc_prob="0.999">
            <gDNA_intron_boundary i_start="36149" i_stop="35803" i_length="347"/>
          </intron>
          <exon e_serial="10" e_score="0.995">
            <gDNA_exon_boundary e_start="35802" e_stop="35436" e_length="367"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41486" stop="41039"/>
              <exon start="40766" stop="40650"/>
              <exon start="39947" stop="39847"/>
              <exon start="38890" stop="38819"/>
              <exon start="38610" stop="38529"/>
              <exon start="37313" stop="37233"/>
              <exon start="36911" stop="36757"/>
              <exon start="36628" stop="36569"/>
              <exon start="36296" stop="36150"/>
              <exon start="35802" stop="35436"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570644" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41359" stop="41225"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588572" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTCTCTCTCATTCGCTCCCTTCAACCGCCACCTGTTCAATGTAAAGACACACATATATATGTGCATTTATTTATACACAGAGAGAAAGATAGAGTGCAAATCTCTTTTTTCTTTTAAATTTTCAGGAGAAGGAGCAAAGAGAATTCAAACCTATGAAGAAGAAGTCGGCGGCGGCGATGGCTATGGCGGCGACCGCCGGAATGTCTGTCAGAAACGTGTTGTGGTTGTGGTGGAAGTTGTTGGTTCTGGTTTCTCTTACTATTTGTGTGTTGGCTTTTCTAAAGCTTCAAAACTACTCTCTTTCCGATTCGGAACTTTCCTCTTCTACTTCTTCAATTTCCAGTAGATCTCGAGCTCTTTATTATACTGGCAATCCCAAAGTTGCGTTCCTCTTTCTAGTGCGGAGGAATTTGCCTCTCGATTTCCTTTGGGGAAATTTCTTTGAG : AATGCTGACCCTGGCAATTTTTCCATATATGTACATTCGGAGCCTGGTTTTGTTTTTGATGAGTCTACAACAAGATCAACTTTCTTTTATAATCGCCAATTGACAAATAGCATCAAG : GTAGCTTGGGGAGAATCAAGTATGATCCACGCAGAAAAATTATTACTTGGCGCGGCACTTGATGATCCAGCAAATCAAAGATTTGTTCTCTTGTCGGACAG : CTGTGTCCCACTGTACAACTTTAGCTTCATATACAACTACTTGATGGCTTCTCCAAGGAGCTTTGTGGACAG : TTTTCTTGATAAAAAGGATGTCCGCTACAACCCAAGGATGTCACCCTATATACCAATGAGCAAATGGCGAAAAGGGTCACAG : TGGATCACTTTAATCAGGAAGCATGCAGAAGTGGTGGCAGATGATGATGCTGTGTTTCCAGTCTTCAAGATGTTCTGCAAG : AGACGTCCAGCGCTGGAAGCCAGTAAGGGAAAAAAGAATATTGTAAGTCAAGAGTGCCTTCTGCTAAGAAGATGCATTTGAATATTGTGCGTTGGCCGTGATGCTGTGCCGACTTCCTCAGTTGGCTCCTCTCTCTTGGCCCCATCCTTTCTTGC : AAACTTCAGAAGCAGCACAACTGCATTCCAGATGAACACTATGTGCAGACATTGTTGGCG : ATACATGGGCTTGAAGGAGAACTTGAACGTAGAACGATAACCTATACAGAGTGGAATGAATCTGTGACAAATATGGAGAAAAAGGGTTGGCATCCCATAACATTTAGCTATGCAGATGCTGGGCCTGTACAGATCAAGAGAATAAAG : GATATCCGCAATGTTTACTATGAAAGCGAGTACAGGACAGAGTGGTGTCGGAATAATTCTACGCTAGCCCCCTGTTTTCTGATTGCAAGGAAATTCTCAGGAGGGGCTGCAATGCGCCTCTTGAGTGAAGGAATAGTTTCTCCATTCGACGCCTCCTCTATGATGAATTTGACACCATGATATATTAATTAGTCTCTATTTATTAGTTTTTATTTGTCATATACTTTGATGAGAGGATAAGTTGCCAATTATAACTGGAGTGTGTCACAACACCTCTAGCTTACTGATTTAGGAAATATACACAAGGAAGCTGATCTAAGTATGGCTCATGTAAAACAGTACTGTAGATATTTTAAAAGAATCACAT</gDNA_template>
            <first_frame> F  S  L  S  F  A  P  F  N  R  H  L  F  N  V  K  T  H  I  Y  M  C  I  Y  L  Y  T  E  R  K  I  E  C  K  S  L  F  S  F  K  F  S  G  E  G  A  K  R  I  Q  T  Y  E  E  E  V  G  G  G  D  G  Y  G  G  D  R  R  N  V  C  Q  K  R  V  V  V  V  V  E  V  V  G  S  G  F  S  Y  Y  L  C  V  G  F  S  K  A  S  K  L  L  S  F  R  F  G  T  F  L  F  Y  F  F  N  F  Q  *  I  S  S  S  L  L  Y  W  Q  S  Q  S  C  V  P  L  S  S  A  E  E  F  A  S  R  F  P  L  G  K  F  L  *   : E  C  *  P  W  Q  F  F  H  I  C  T  F  G  A  W  F  C  F  *  *  V  Y  N  K  I  N  F  L  L  *  S  P  I  D  K  *  H  Q   : G  S  L  G  R  I  K  Y  D  P  R  R  K  I  I  T  W  R  G  T  *  *  S  S  K  S  K  I  C  S  L  V  G  Q  :  L  C  P  T  V  Q  L  *  L  H  I  Q  L  L  D  G  F  S  K  E  L  C  G  Q  :  F  S  *  *  K  G  C  P  L  Q  P  K  D  V  T  L  Y  T  N  E  Q  M  A  K  R  V  T   : V  D  H  F  N  Q  E  A  C  R  S  G  G  R  *  *  C  C  V  S  S  L  Q  D  V  L  Q   : E  T  S  S  A  G  S  Q  *  G  K  K  E  Y  C  K  S  R  V  P  S  A  K  K  M  H  L  N  I  V  R  W  P  *  C  C  A  D  F  L  S  W  L  L  S  L  G  P  I  L  S  C  :  K  L  Q  K  Q  H  N  C  I  P  D  E  H  Y  V  Q  T  L  L  A  :  I  H  G  L  E  G  E  L  E  R  R  T  I  T  Y  T  E  W  N  E  S  V  T  N  M  E  K  K  G  W  H  P  I  T  F  S  Y  A  D  A  G  P  V  Q  I  K  R  I  K  :  D  I  R  N  V  Y  Y  E  S  E  Y  R  T  E  W  C  R  N  N  S  T  L  A  P  C  F  L  I  A  R  K  F  S  G  G  A  A  M  R  L  L  S  E  G  I  V  S  P  F  D  A  S  S  M  M  N  L  T  P  *  Y  I  N  *  S  L  F  I  S  F  Y  L  S  Y  T  L  M  R  G  *  V  A  N  Y  N  W  S  V  S  Q  H  L  *  L  T  D  L  G  N  I  H  K  E  A  D  L  S  M  A  H  V  K  Q  Y  C  R  Y  F  K  R  I  T  </first_frame>
            <second_frame>  S  L  S  H  S  L  P  S  T  A  T  C  S  M  *  R  H  T  Y  I  C  A  F  I  Y  T  Q  R  E  R  *  S  A  N  L  F  F  L  L  N  F  Q  E  K  E  Q  R  E  F  K  P  M  K  K  K  S  A  A  A  M  A  M  A  A  T  A  G  M  S  V  R  N  V  L  W  L  W  W  K  L  L  V  L  V  S  L  T  I  C  V  L  A  F  L  K  L  Q  N  Y  S  L  S  D  S  E  L  S  S  S  T  S  S  I  S  S  R  S  R  A  L  Y  Y  T  G  N  P  K  V  A  F  L  F  L  V  R  R  N  L  P  L  D  F  L  W  G  N  F  F  E  :  N  A  D  P  G  N  F  S  I  Y  V  H  S  E  P  G  F  V  F  D  E  S  T  T  R  S  T  F  F  Y  N  R  Q  L  T  N  S  I  K  :  V  A  W  G  E  S  S  M  I  H  A  E  K  L  L  L  G  A  A  L  D  D  P  A  N  Q  R  F  V  L  L  S  D  S :   C  V  P  L  Y  N  F  S  F  I  Y  N  Y  L  M  A  S  P  R  S  F  V  D  S :   F  L  D  K  K  D  V  R  Y  N  P  R  M  S  P  Y  I  P  M  S  K  W  R  K  G  S  Q  :  W  I  T  L  I  R  K  H  A  E  V  V  A  D  D  D  A  V  F  P  V  F  K  M  F  C  K  :  R  R  P  A  L  E  A  S  K  G  K  K  N  I  V  S  Q  E  C  L  L  L  R  R  C  I  *  I  L  C  V  G  R  D  A  V  P  T  S  S  V  G  S  S  L  L  A  P  S  F  L  A :   N  F  R  S  S  T  T  A  F  Q  M  N  T  M  C  R  H  C  W  R :   Y  M  G  L  K  E  N  L  N  V  E  R  *  P  I  Q  S  G  M  N  L  *  Q  I  W  R  K  R  V  G  I  P  *  H  L  A  M  Q  M  L  G  L  Y  R  S  R  E  *  R :   I  S  A  M  F  T  M  K  A  S  T  G  Q  S  G  V  G  I  I  L  R  *  P  P  V  F  *  L  Q  G  N  S  Q  E  G  L  Q  C  A  S  *  V  K  E  *  F  L  H  S  T  P  P  L  *  *  I  *  H  H  D  I  L  I  S  L  Y  L  L  V  F  I  C  H  I  L  *  *  E  D  K  L  P  I  I  T  G  V  C  H  N  T  S  S  L  L  I  *  E  I  Y  T  R  K  L  I  *  V  W  L  M  *  N  S  T  V  D  I  L  K  E  S  H </second_frame>
            <third_frame>   L  S  L  I  R  S  L  Q  P  P  P  V  Q  C  K  D  T  H  I  Y  V  H  L  F  I  H  R  E  K  D  R  V  Q  I  S  F  F  F  *  I  F  R  R  R  S  K  E  N  S  N  L  *  R  R  S  R  R  R  R  W  L  W  R  R  P  P  E  C  L  S  E  T  C  C  G  C  G  G  S  C  W  F  W  F  L  L  L  F  V  C  W  L  F  *  S  F  K  T  T  L  F  P  I  R  N  F  P  L  L  L  L  Q  F  P  V  D  L  E  L  F  I  I  L  A  I  P  K  L  R  S  S  F  *  C  G  G  I  C  L  S  I  S  F  G  E  I  S  L  R :   M  L  T  L  A  I  F  P  Y  M  Y  I  R  S  L  V  L  F  L  M  S  L  Q  Q  D  Q  L  S  F  I  I  A  N  *  Q  I  A  S  R :   *  L  G  E  N  Q  V  *  S  T  Q  K  N  Y  Y  L  A  R  H  L  M  I  Q  Q  I  K  D  L  F  S  C  R  T   : A  V  S  H  C  T  T  L  A  S  Y  T  T  T  *  W  L  L  Q  G  A  L  W  T   : V  F  L  I  K  R  M  S  A  T  T  Q  G  C  H  P  I  Y  Q  *  A  N  G  E  K  G  H  S :   G  S  L  *  S  G  S  M  Q  K  W  W  Q  M  M  M  L  C  F  Q  S  S  R  C  S  A  R :   D  V  Q  R  W  K  P  V  R  E  K  R  I  L  *  V  K  S  A  F  C  *  E  D  A  F  E  Y  C  A  L  A  V  M  L  C  R  L  P  Q  L  A  P  L  S  W  P  H  P  F  L   : Q  T  S  E  A  A  Q  L  H  S  R  *  T  L  C  A  D  I  V  G   : D  T  W  A  *  R  R  T  *  T  *  N  D  N  L  Y  R  V  E  *  I  C  D  K  Y  G  E  K  G  L  A  S  H  N  I  *  L  C  R  C  W  A  C  T  D  Q  E  N  K   : G  Y  P  Q  C  L  L  *  K  R  V  Q  D  R  V  V  S  E  *  F  Y  A  S  P  L  F  S  D  C  K  E  I  L  R  R  G  C  N  A  P  L  E  *  R  N  S  F  S  I  R  R  L  L  Y  D  E  F  D  T  M  I  Y  *  L  V  S  I  Y  *  F  L  F  V  I  Y  F  D  E  R  I  S  C  Q  L  *  L  E  C  V  T  T  P  L  A  Y  *  F  R  K  Y  T  Q  G  S  *  S  K  Y  G  S  C  K  T  V  L  *  I  F  *  K  N  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41392" stop="41039"/>
                    <exon start="40766" stop="40650"/>
                    <exon start="39947" stop="39847"/>
                    <exon start="38890" stop="38819"/>
                    <exon start="38610" stop="38529"/>
                    <exon start="37313" stop="37233"/>
                    <exon start="36911" stop="36831"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>885</number_coding_nucleotides>
                  <number_encoded_amino_acids>295</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SANLFFLLNFQEKEQREFKPMKKKSAAAMAMAATAGMSVRNVLWLWWKLLVLVSLTICVLAFLKLQNYSLSDSELSSSTSSISSRSRALYYTGNPKVAFLFLVRRNLPLDFLWGNFFENADPGNFSIYVHSEPGFVFDESTTRSTFFYNRQLTNSIKVAWGESSMIHAEKLLLGAALDDPANQRFVLLSDSCVPLYNFSFIYNYLMASPRSFVDSFLDKKDVRYNPRMSPYIPMSKWRKGSQWITLIRKHAEVVADDDAVFPVFKMFCKRRPALEASKGKKNIVSQECLLLRRCI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36810" stop="36757"/>
                    <exon start="36628" stop="36569"/>
                    <exon start="36296" stop="36150"/>
                    <exon start="35802" stop="35623"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>438</number_coding_nucleotides>
                  <number_encoded_amino_acids>146</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CCADFLSWLLSLGPILSCKLQKQHNCIPDEHYVQTLLAIHGLEGELERRTITYTEWNESVTNMEKKGWHPITFSYADAGPVQIKRIKDIRNVYYESEYRTEWCRNNSTLAPCFLIARKFSGGAAMRLLSEGIVSPFDASSMMNLTP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="48774" PGL_stop="47588"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="48774" e_stop="47588"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="48774" e_stop="47588" e_length="1187"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48774" stop="48125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576392" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48280" stop="47588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U588580" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCTTAAAGTGTTTGGTTGTGTCTGTTTTGTTCATGTTCCTCAGGTTAAACATGACAAACTTGACAAGAAAGCAATCATAGGCATCCATGTGGGTTACAGTGAAGTTTCTAAAGCCTACAAGGTTTATCATCCTCAGACAGGAAAGATGACAATTACAAGAGATGTTCATTTTAGTGAGAATGAACAGTGGAACTGGAAGAACTCTCAGAAATCAGGAAGACGCTCTCTAGAAGCAAACATCAGCCCTCCTGAAGAGCAAAAAATAGAACACTGGCAGCAAAAACTAGAAGATGATCATCCAGTCAAGGGGAGAAGATTGTTGTCAGATATCTATCAGAGGTATAATGTCGCCATCTATGAACCTGCTGGTCCAGTAGAAGCTTTGCAAGACCCAAAATGGAAGAAAGCAATGGAGGAGGAAATCTCCATGATTGAGAAAAATAAAACTTGGGTGCTTGTCAACAAACCTGAAGATAGAAAAGTCATTGGTGTGAGATGGTCTTCAGAACAAAGTTAAATGCAGATAGTTCCATCAACAAATACAAGACGAGGCTTGTAGTTAAAGGGTATGCACAAATTTATGGTGTCGATTACTCTGACACCTTTTCTCCTGTTGCAAGATTAGACACAATCAGGTTGCTACCCGCAATAGCAGCACAAATGGATTCTCAGATAGTGATTAGGCCAGATCCGCAGATGATATGAGAAGTACCTCTCGCCATTGTTTCAGCCTAGGTTCAGGAATATTCTCATGGTCATCTAAGAAACAGGAAATTGTTGCACAATCAACAGCAGCAACAGGAGCAGTAAACCAAGTCTTGTGGCTTAGAAAGATCATGTATGATTTACATGTGGAACAGAAGGAAAGTACTAGCATTCTTGTCGACAACCAGGCAGCTATTGCAATCTCAAACAATCCGGTGTTTCACAAGAAGACCAAGCATTTCAACATCAAGTTCTATTTTCTGAGAGAAGTACAGCAAAGGGGAGAAGTAACTCTAGTCTATACTAAGACTTTACCGATCAGCAAATTCGAGCTTCTTAGACAGAAAATTGGAGTTTGCAGTATCCAAAGCAAGGAGGAGTGCAAGGAATCTGTTTTGAACCGCAGTAAATTTAATTTTACTGCCTATGTTTTAAGTTAGACTTAGTCAATTAGTTGTTAGTCATGCTTTCCTATTATTT</gDNA_template>
            <first_frame> F  L  K  V  F  G  C  V  C  F  V  H  V  P  Q  V  K  H  D  K  L  D  K  K  A  I  I  G  I  H  V  G  Y  S  E  V  S  K  A  Y  K  V  Y  H  P  Q  T  G  K  M  T  I  T  R  D  V  H  F  S  E  N  E  Q  W  N  W  K  N  S  Q  K  S  G  R  R  S  L  E  A  N  I  S  P  P  E  E  Q  K  I  E  H  W  Q  Q  K  L  E  D  D  H  P  V  K  G  R  R  L  L  S  D  I  Y  Q  R  Y  N  V  A  I  Y  E  P  A  G  P  V  E  A  L  Q  D  P  K  W  K  K  A  M  E  E  E  I  S  M  I  E  K  N  K  T  W  V  L  V  N  K  P  E  D  R  K  V  I  G  V  R  W  S  S  E  Q  S  *  M  Q  I  V  P  S  T  N  T  R  R  G  L  *  L  K  G  M  H  K  F  M  V  S  I  T  L  T  P  F  L  L  L  Q  D  *  T  Q  S  G  C  Y  P  Q  *  Q  H  K  W  I  L  R  *  *  L  G  Q  I  R  R  *  Y  E  K  Y  L  S  P  L  F  Q  P  R  F  R  N  I  L  M  V  I  *  E  T  G  N  C  C  T  I  N  S  S  N  R  S  S  K  P  S  L  V  A  *  K  D  H  V  *  F  T  C  G  T  E  G  K  Y  *  H  S  C  R  Q  P  G  S  Y  C  N  L  K  Q  S  G  V  S  Q  E  D  Q  A  F  Q  H  Q  V  L  F  S  E  R  S  T  A  K  G  R  S  N  S  S  L  Y  *  D  F  T  D  Q  Q  I  R  A  S  *  T  E  N  W  S  L  Q  Y  P  K  Q  G  G  V  Q  G  I  C  F  E  P  Q  *  I  *  F  Y  C  L  C  F  K  L  D  L  V  N  *  L  L  V  M  L  S  Y  Y   </first_frame>
            <second_frame>  F  L  K  C  L  V  V  S  V  L  F  M  F  L  R  L  N  M  T  N  L  T  R  K  Q  S  *  A  S  M  W  V  T  V  K  F  L  K  P  T  R  F  I  I  L  R  Q  E  R  *  Q  L  Q  E  M  F  I  L  V  R  M  N  S  G  T  G  R  T  L  R  N  Q  E  D  A  L  *  K  Q  T  S  A  L  L  K  S  K  K  *  N  T  G  S  K  N  *  K  M  I  I  Q  S  R  G  E  D  C  C  Q  I  S  I  R  G  I  M  S  P  S  M  N  L  L  V  Q  *  K  L  C  K  T  Q  N  G  R  K  Q  W  R  R  K  S  P  *  L  R  K  I  K  L  G  C  L  S  T  N  L  K  I  E  K  S  L  V  *  D  G  L  Q  N  K  V  K  C  R  *  F  H  Q  Q  I  Q  D  E  A  C  S  *  R  V  C  T  N  L  W  C  R  L  L  *  H  L  F  S  C  C  K  I  R  H  N  Q  V  A  T  R  N  S  S  T  N  G  F  S  D  S  D  *  A  R  S  A  D  D  M  R  S  T  S  R  H  C  F  S  L  G  S  G  I  F  S  W  S  S  K  K  Q  E  I  V  A  Q  S  T  A  A  T  G  A  V  N  Q  V  L  W  L  R  K  I  M  Y  D  L  H  V  E  Q  K  E  S  T  S  I  L  V  D  N  Q  A  A  I  A  I  S  N  N  P  V  F  H  K  K  T  K  H  F  N  I  K  F  Y  F  L  R  E  V  Q  Q  R  G  E  V  T  L  V  Y  T  K  T  L  P  I  S  K  F  E  L  L  R  Q  K  I  G  V  C  S  I  Q  S  K  E  E  C  K  E  S  V  L  N  R  S  K  F  N  F  T  A  Y  V  L  S  *  T  *  S  I  S  C  *  S  C  F  P  I  I  </second_frame>
            <third_frame>   S  *  S  V  W  L  C  L  F  C  S  C  S  S  G  *  T  *  Q  T  *  Q  E  S  N  H  R  H  P  C  G  L  Q  *  S  F  *  S  L  Q  G  L  S  S  S  D  R  K  D  D  N  Y  K  R  C  S  F  *  *  E  *  T  V  E  L  E  E  L  S  E  I  R  K  T  L  S  R  S  K  H  Q  P  S  *  R  A  K  N  R  T  L  A  A  K  T  R  R  *  S  S  S  Q  G  E  K  I  V  V  R  Y  L  S  E  V  *  C  R  H  L  *  T  C  W  S  S  R  S  F  A  R  P  K  M  E  E  S  N  G  G  G  N  L  H  D  *  E  K  *  N  L  G  A  C  Q  Q  T  *  R  *  K  S  H  W  C  E  M  V  F  R  T  K  L  N  A  D  S  S  I  N  K  Y  K  T  R  L  V  V  K  G  Y  A  Q  I  Y  G  V  D  Y  S  D  T  F  S  P  V  A  R  L  D  T  I  R  L  L  P  A  I  A  A  Q  M  D  S  Q  I  V  I  R  P  D  P  Q  M  I  *  E  V  P  L  A  I  V  S  A  *  V  Q  E  Y  S  H  G  H  L  R  N  R  K  L  L  H  N  Q  Q  Q  Q  Q  E  Q  *  T  K  S  C  G  L  E  R  S  C  M  I  Y  M  W  N  R  R  K  V  L  A  F  L  S  T  T  R  Q  L  L  Q  S  Q  T  I  R  C  F  T  R  R  P  S  I  S  T  S  S  S  I  F  *  E  K  Y  S  K  G  E  K  *  L  *  S  I  L  R  L  Y  R  S  A  N  S  S  F  L  D  R  K  L  E  F  A  V  S  K  A  R  R  S  A  R  N  L  F  *  T  A  V  N  L  I  L  L  P  M  F  *  V  R  L  S  Q  L  V  V  S  H  A  F  L  L  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48774" stop="48256"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>516</number_coding_nucleotides>
                  <number_encoded_amino_acids>172</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLKVFGCVCFVHVPQVKHDKLDKKAIIGIHVGYSEVSKAYKVYHPQTGKMTITRDVHFSENEQWNWKNSQKSGRRSLEANISPPEEQKIEHWQQKLEDDHPVKGRRLLSDIYQRYNVAIYEPAGPVEALQDPKWKKAMEEEISMIEKNKTWVLVNKPEDRKVIGVRWSSEQS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="48089" stop="47628"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>459</number_coding_nucleotides>
                  <number_encoded_amino_acids>153</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ARSADDMRSTSRHCFSLGSGIFSWSSKKQEIVAQSTAATGAVNQVLWLRKIMYDLHVEQKESTSILVDNQAAIAISNNPVFHKKTKHFNIKFYFLREVQQRGEVTLVYTKTLPISKFELLRQKIGVCSIQSKEECKESVLNRSKFNFTAYVLS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="61762" PGL_stop="51333"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61762" e_stop="61337"/>
            <exon e_start="55416" e_stop="55272"/>
            <exon e_start="55200" e_stop="55144"/>
            <exon e_start="54427" e_stop="54308"/>
            <exon e_start="54214" e_stop="54110"/>
            <exon e_start="53969" e_stop="53746"/>
            <exon e_start="53657" e_stop="53591"/>
            <exon e_start="53505" e_stop="53351"/>
            <exon e_start="53168" e_stop="52904"/>
            <exon e_start="52742" e_stop="52548"/>
            <exon e_start="52398" e_stop="52319"/>
            <exon e_start="51593" e_stop="51531"/>
            <exon e_start="51399" e_stop="51333"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.994" e_score="0.998"/>
          <exon-intron don_prob="0.998" acc_prob="0.939" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.120" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.963" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.918" e_score="1.000"/>
          <exon-intron don_prob="0.804" acc_prob="0.994" e_score="0.996"/>
          <exon-intron don_prob="0.997" acc_prob="0.137" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.942" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="61762" e_stop="61337" e_length="426"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.994">
            <gDNA_intron_boundary i_start="61336" i_stop="55417" i_length="5920"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="55416" e_stop="55272" e_length="145"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.939">
            <gDNA_intron_boundary i_start="55271" i_stop="55201" i_length="71"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="55200" e_stop="55144" e_length="57"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.120">
            <gDNA_intron_boundary i_start="55143" i_stop="54428" i_length="716"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="54427" e_stop="54308" e_length="120"/>
          </exon>
          <intron i_serial="4" don_prob="0.969" acc_prob="0.963">
            <gDNA_intron_boundary i_start="54307" i_stop="54215" i_length="93"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="54214" e_stop="54110" e_length="105"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.918">
            <gDNA_intron_boundary i_start="54109" i_stop="53970" i_length="140"/>
          </intron>
          <exon e_serial="6" e_score="0.996">
            <gDNA_exon_boundary e_start="53969" e_stop="53746" e_length="224"/>
          </exon>
          <intron i_serial="6" don_prob="0.804" acc_prob="0.994">
            <gDNA_intron_boundary i_start="53745" i_stop="53658" i_length="88"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="53657" e_stop="53591" e_length="67"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.137">
            <gDNA_intron_boundary i_start="53590" i_stop="53506" i_length="85"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="53505" e_stop="53351" e_length="155"/>
          </exon>
          <intron i_serial="8" don_prob="0.983" acc_prob="0.991">
            <gDNA_intron_boundary i_start="53350" i_stop="53169" i_length="182"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="53168" e_stop="52904" e_length="265"/>
          </exon>
          <intron i_serial="9" don_prob="0.952" acc_prob="0.974">
            <gDNA_intron_boundary i_start="52903" i_stop="52743" i_length="161"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="52742" e_stop="52548" e_length="195"/>
          </exon>
          <intron i_serial="10" don_prob="0.999" acc_prob="0.996">
            <gDNA_intron_boundary i_start="52547" i_stop="52399" i_length="149"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="52398" e_stop="52319" e_length="80"/>
          </exon>
          <intron i_serial="11" don_prob="0.978" acc_prob="0.997">
            <gDNA_intron_boundary i_start="52318" i_stop="51594" i_length="725"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="51593" e_stop="51531" e_length="63"/>
          </exon>
          <intron i_serial="12" don_prob="0.942" acc_prob="0.999">
            <gDNA_intron_boundary i_start="51530" i_stop="51400" i_length="131"/>
          </intron>
          <exon e_serial="13" e_score="0.955">
            <gDNA_exon_boundary e_start="51399" e_stop="51333" e_length="67"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61762" stop="61337"/>
              <exon start="55416" stop="55272"/>
              <exon start="55200" stop="55144"/>
              <exon start="54427" stop="54308"/>
              <exon start="54214" stop="54110"/>
              <exon start="53969" stop="53949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594710" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54316" stop="54308"/>
              <exon start="54214" stop="54110"/>
              <exon start="53969" stop="53746"/>
              <exon start="53657" stop="53591"/>
              <exon start="53505" stop="53351"/>
              <exon start="53168" stop="52904"/>
              <exon start="52742" stop="52548"/>
              <exon start="52398" stop="52319"/>
              <exon start="51593" stop="51531"/>
              <exon start="51399" stop="51333"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572637" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAAACCACTGCAACTTCTTCACTCCCCTTCTCCCCCATAGCAATGCCCATCCAACTCCATACTTCTACGCGCCTTCATCACTTGCCTTCTCATCTCCTTCCTCGTCCTCCTCTCCTCCGCTCTGCGCTTTTACTCCCTGCCTGTCGCCGTCCTTTACTGCGCCGTGAATTTTGTAACCATGAACGCTTCGGAGTCTCCAATTGTACAAAAAGTTCTAGCAAAAATACCGTGACTGTGCTAGTAAATGCAATTGATGGGCAAAAGATAAATGAGAAACACGAGAAGGTCAAAAGGGCTTACCCGTTTCACGAAATTGAACCAAAATGGCAACATTATTGGGAAGAGAATAAGACATTTCGAACCCCTGATGAGATTGATACTTCCAAGCCCAAATTCTATGTTCTTGATATGTTCCCATATCCAAG : TGGAGCTGGTTTGCATGTTGGACATCCACTGGGATATACTGCGACAGATATCCTTGCTAGATTTAAACGCATGCAAGGTTTCAACGTATTGCATCCAATGGGATGGGATGCATTTGGTTTACCTGCTGAGCAGTACGCTATTGAC : ACAGGCACACATCCAAAAATCACAACTTTGAGGAATATTAGTCGTTTTCGCTCGCAG : CTTAAATCATTAGGCTTCTCTTATGATTGGGATCGTGAGATTTCTACGACAGAACCTGATTACTACAAATGGACTCAGTGGATATTTCTTCAACTTCTGAAGAGAGGACTAGCTTATCAG : GCTGAAGTGCCTGTCAATTGGTGTCCAGCACTTGGTACTGTCTTGGCAAATGAAGAAGTAATTGATGGTGTAAGTGAAAGAGGGGGGCATCCAGTCATCAGAAAG : CCTATGCGGCAGTGGATGTTGAGGATAACTGCTTATGCTGACCGTCTTCTTGAGGATTTAGATGACCTAGACTGGCCTGAAAGTATAAAGGAAATGCAGAGGAATTGGATTGGTAGGTCAGAAGGAGCAGAATTGGATTTTGTTGTCATAAATGGTAACAGTCAGGAAGAAGAGAAAAGAATAACAGTTTATACAACAAGACCAGACACTATTTTTGGTGCAAC : ATACTTAGTCCTTGCACCTGAGCATCCCTTTCTGTCATCACTTGTATCAGAAGCACAAAGTAAACAT : GTAGAGGAGTACAGGGAACATGCTTTTAGAAAGAGTGACCTTGAGAGGACTGAGCTTCAAAAGGAAAAAACAGGCGTCTTTACTGGTTGTTATGCAAAAAATCCAGCCAATGGCCAAGCTGTTCCTATTTGGGTTGCTGATTATGTCTTGGGAAG : CTACGGGACAGGAGCAATAATGGCTGTGCCTGCCCATGACACACGCGACTTTGAATTTGCTATGAAGTACACTATCCCAATTTCTTGGGTTGTAAGACCAGATGATAGCAATTGTGGCAATTTTGAGAAACCATATTCAGGTGAAGGATCAATGATAAATTCATCATATTCAGAGTCAGGGCTTGACATTAATGGTTTGCCTAGCAAAGAAGCTGCTTCAAGAGTCGTCCAATGGCTTGAGAAAAGTGGAAACGGGAAGAAAAAG : GTAAATTACAAGTTAAGGGACTGGCTTTTTGCCCGGCAACGCTATTGGGGGGAGCCTATTCCAGTTATCTTTTTGGATGACACAGGAGAAGGTATTCCAGTTCCAGAAACCGAGCTTCCTCTTACCCTTCCTGAGTTGGATGATTTCACTCCCACTGGGACTGGGGAGCCACCTCTTGCCAAAGCAGATTCTTGG : GTTATAACCAAAGATCCTTTATCTGAAAAACCTGCTAGGCGAGAAACAAACACCATGCCCCAGTGGGCTGGTTCTTGCTG : GTACTATCTAAGATTTATGGACCCAAAAAACTCCAGCGCATTGGTTGACAAGGCACAAGAACA : GTACTGGGGCCCTGTTGACGTGTATGTTGGTGGTGCTGAGCATGCTGTTCTTCATTTACTTTATGCC</gDNA_template>
            <first_frame> S  N  H  C  N  F  F  T  P  L  L  P  H  S  N  A  H  P  T  P  Y  F  Y  A  P  S  S  L  A  F  S  S  P  S  S  S  S  S  P  P  L  C  A  F  T  P  C  L  S  P  S  F  T  A  P  *  I  L  *  P  *  T  L  R  S  L  Q  L  Y  K  K  F  *  Q  K  Y  R  D  C  A  S  K  C  N  *  W  A  K  D  K  *  E  T  R  E  G  Q  K  G  L  P  V  S  R  N  *  T  K  M  A  T  L  L  G  R  E  *  D  I  S  N  P  *  *  D  *  Y  F  Q  A  Q  I  L  C  S  *  Y  V  P  I  S  K  :  W  S  W  F  A  C  W  T  S  T  G  I  Y  C  D  R  Y  P  C  *  I  *  T  H  A  R  F  Q  R  I  A  S  N  G  M  G  C  I  W  F  T  C  *  A  V  R  Y  *   : H  R  H  T  S  K  N  H  N  F  E  E  Y  *  S  F  S  L  A   : A  *  I  I  R  L  L  L  *  L  G  S  *  D  F  Y  D  R  T  *  L  L  Q  M  D  S  V  D  I  S  S  T  S  E  E  R  T  S  L  S   : G  *  S  A  C  Q  L  V  S  S  T  W  Y  C  L  G  K  *  R  S  N  *  W  C  K  *  K  R  G  A  S  S  H  Q  K   : A  Y  A  A  V  D  V  E  D  N  C  L  C  *  P  S  S  *  G  F  R  *  P  R  L  A  *  K  Y  K  G  N  A  E  E  L  D  W  *  V  R  R  S  R  I  G  F  C  C  H  K  W  *  Q  S  G  R  R  E  K  N  N  S  L  Y  N  K  T  R  H  Y  F  W  C  N  :  I  L  S  P  C  T  *  A  S  L  S  V  I  T  C  I  R  S  T  K  *  T   : C  R  G  V  Q  G  T  C  F  *  K  E  *  P  *  E  D  *  A  S  K  G  K  N  R  R  L  Y  W  L  L  C  K  K  S  S  Q  W  P  S  C  S  Y  L  G  C  *  L  C  L  G  K  :  L  R  D  R  S  N  N  G  C  A  C  P  *  H  T  R  L  *  I  C  Y  E  V  H  Y  P  N  F  L  G  C  K  T  R  *  *  Q  L  W  Q  F  *  E  T  I  F  R  *  R  I  N  D  K  F  I  I  F  R  V  R  A  *  H  *  W  F  A  *  Q  R  S  C  F  K  S  R  P  M  A  *  E  K  W  K  R  E  E  K   : G  K  L  Q  V  K  G  L  A  F  C  P  A  T  L  L  G  G  A  Y  S  S  Y  L  F  G  *  H  R  R  R  Y  S  S  S  R  N  R  A  S  S  Y  P  S  *  V  G  *  F  H  S  H  W  D  W  G  A  T  S  C  Q  S  R  F  L   : G  Y  N  Q  R  S  F  I  *  K  T  C  *  A  R  N  K  H  H  A  P  V  G  W  F  L  L  :  V  L  S  K  I  Y  G  P  K  K  L  Q  R  I  G  *  Q  G  T  R  T  :  V  L  G  P  C  *  R  V  C  W  W  C  *  A  C  C  S  S  F  T  L  C  </first_frame>
            <second_frame>  Q  T  T  A  T  S  S  L  P  F  S  P  I  A  M  P  I  Q  L  H  T  S  T  R  L  H  H  L  P  S  H  L  L  P  R  P  P  L  L  R  S  A  L  L  L  P  A  C  R  R  P  L  L  R  R  E  F  C  N  H  E  R  F  G  V  S  N  C  T  K  S  S  S  K  N  T  V  T  V  L  V  N  A  I  D  G  Q  K  I  N  E  K  H  E  K  V  K  R  A  Y  P  F  H  E  I  E  P  K  W  Q  H  Y  W  E  E  N  K  T  F  R  T  P  D  E  I  D  T  S  K  P  K  F  Y  V  L  D  M  F  P  Y  P  S :   G  A  G  L  H  V  G  H  P  L  G  Y  T  A  T  D  I  L  A  R  F  K  R  M  Q  G  F  N  V  L  H  P  M  G  W  D  A  F  G  L  P  A  E  Q  Y  A  I  D  :  T  G  T  H  P  K  I  T  T  L  R  N  I  S  R  F  R  S  Q  :  L  K  S  L  G  F  S  Y  D  W  D  R  E  I  S  T  T  E  P  D  Y  Y  K  W  T  Q  W  I  F  L  Q  L  L  K  R  G  L  A  Y  Q  :  A  E  V  P  V  N  W  C  P  A  L  G  T  V  L  A  N  E  E  V  I  D  G  V  S  E  R  G  G  H  P  V  I  R  K  :  P  M  R  Q  W  M  L  R  I  T  A  Y  A  D  R  L  L  E  D  L  D  D  L  D  W  P  E  S  I  K  E  M  Q  R  N  W  I  G  R  S  E  G  A  E  L  D  F  V  V  I  N  G  N  S  Q  E  E  E  K  R  I  T  V  Y  T  T  R  P  D  T  I  F  G  A  T :   Y  L  V  L  A  P  E  H  P  F  L  S  S  L  V  S  E  A  Q  S  K  H  :  V  E  E  Y  R  E  H  A  F  R  K  S  D  L  E  R  T  E  L  Q  K  E  K  T  G  V  F  T  G  C  Y  A  K  N  P  A  N  G  Q  A  V  P  I  W  V  A  D  Y  V  L  G  S :   Y  G  T  G  A  I  M  A  V  P  A  H  D  T  R  D  F  E  F  A  M  K  Y  T  I  P  I  S  W  V  V  R  P  D  D  S  N  C  G  N  F  E  K  P  Y  S  G  E  G  S  M  I  N  S  S  Y  S  E  S  G  L  D  I  N  G  L  P  S  K  E  A  A  S  R  V  V  Q  W  L  E  K  S  G  N  G  K  K  K  :  V  N  Y  K  L  R  D  W  L  F  A  R  Q  R  Y  W  G  E  P  I  P  V  I  F  L  D  D  T  G  E  G  I  P  V  P  E  T  E  L  P  L  T  L  P  E  L  D  D  F  T  P  T  G  T  G  E  P  P  L  A  K  A  D  S  W  :  V  I  T  K  D  P  L  S  E  K  P  A  R  R  E  T  N  T  M  P  Q  W  A  G  S  C  W :   Y  Y  L  R  F  M  D  P  K  N  S  S  A  L  V  D  K  A  Q  E  Q :   Y  W  G  P  V  D  V  Y  V  G  G  A  E  H  A  V  L  H  L  L  Y  A </second_frame>
            <third_frame>   K  P  L  Q  L  L  H  S  P  S  P  P  *  Q  C  P  S  N  S  I  L  L  R  A  F  I  T  C  L  L  I  S  F  L  V  L  L  S  S  A  L  R  F  Y  S  L  P  V  A  V  L  Y  C  A  V  N  F  V  T  M  N  A  S  E  S  P  I  V  Q  K  V  L  A  K  I  P  *  L  C  *  *  M  Q  L  M  G  K  R  *  M  R  N  T  R  R  S  K  G  L  T  R  F  T  K  L  N  Q  N  G  N  I  I  G  K  R  I  R  H  F  E  P  L  M  R  L  I  L  P  S  P  N  S  M  F  L  I  C  S  H  I  Q   : V  E  L  V  C  M  L  D  I  H  W  D  I  L  R  Q  I  S  L  L  D  L  N  A  C  K  V  S  T  Y  C  I  Q  W  D  G  M  H  L  V  Y  L  L  S  S  T  L  L  T :   Q  A  H  I  Q  K  S  Q  L  *  G  I  L  V  V  F  A  R  S :   L  N  H  *  A  S  L  M  I  G  I  V  R  F  L  R  Q  N  L  I  T  T  N  G  L  S  G  Y  F  F  N  F  *  R  E  D  *  L  I  R :   L  K  C  L  S  I  G  V  Q  H  L  V  L  S  W  Q  M  K  K  *  L  M  V  *  V  K  E  G  G  I  Q  S  S  E  S :   L  C  G  S  G  C  *  G  *  L  L  M  L  T  V  F  L  R  I  *  M  T  *  T  G  L  K  V  *  R  K  C  R  G  I  G  L  V  G  Q  K  E  Q  N  W  I  L  L  S  *  M  V  T  V  R  K  K  R  K  E  *  Q  F  I  Q  Q  D  Q  T  L  F  L  V  Q   : H  T  *  S  L  H  L  S  I  P  F  C  H  H  L  Y  Q  K  H  K  V  N  M :   *  R  S  T  G  N  M  L  L  E  R  V  T  L  R  G  L  S  F  K  R  K  K  Q  A  S  L  L  V  V  M  Q  K  I  Q  P  M  A  K  L  F  L  F  G  L  L  I  M  S  W  E   : A  T  G  Q  E  Q  *  W  L  C  L  P  M  T  H  A  T  L  N  L  L  *  S  T  L  S  Q  F  L  G  L  *  D  Q  M  I  A  I  V  A  I  L  R  N  H  I  Q  V  K  D  Q  *  *  I  H  H  I  Q  S  Q  G  L  T  L  M  V  C  L  A  K  K  L  L  Q  E  S  S  N  G  L  R  K  V  E  T  G  R  K  R :   *  I  T  S  *  G  T  G  F  L  P  G  N  A  I  G  G  S  L  F  Q  L  S  F  W  M  T  Q  E  K  V  F  Q  F  Q  K  P  S  F  L  L  P  F  L  S  W  M  I  S  L  P  L  G  L  G  S  H  L  L  P  K  Q  I  L  G :   L  *  P  K  I  L  Y  L  K  N  L  L  G  E  K  Q  T  P  C  P  S  G  L  V  L  A   : G  T  I  *  D  L  W  T  Q  K  T  P  A  H  W  L  T  R  H  K  N   : S  T  G  A  L  L  T  C  M  L  V  V  L  S  M  L  F  F  I  Y  F  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61761" stop="61337"/>
                    <exon start="55416" stop="55272"/>
                    <exon start="55200" stop="55144"/>
                    <exon start="54427" stop="54308"/>
                    <exon start="54214" stop="54110"/>
                    <exon start="53969" stop="53746"/>
                    <exon start="53657" stop="53591"/>
                    <exon start="53505" stop="53351"/>
                    <exon start="53168" stop="52904"/>
                    <exon start="52742" stop="52548"/>
                    <exon start="52398" stop="52319"/>
                    <exon start="51593" stop="51531"/>
                    <exon start="51399" stop="51333"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1968</number_coding_nucleotides>
                  <number_encoded_amino_acids>656</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QTTATSSLPFSPIAMPIQLHTSTRLHHLPSHLLPRPPLLRSALLLPACRRPLLRREFCNHERFGVSNCTKSSSKNTVTVLVNAIDGQKINEKHEKVKRAYPFHEIEPKWQHYWEENKTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARFKRMQGFNVLHPMGWDAFGLPAEQYAIDTGTHPKITTLRNISRFRSQLKSLGFSYDWDREISTTEPDYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVIDGVSERGGHPVIRKPMRQWMLRITAYADRLLEDLDDLDWPESIKEMQRNWIGRSEGAELDFVVINGNSQEEEKRITVYTTRPDTIFGATYLVLAPEHPFLSSLVSEAQSKHVEEYREHAFRKSDLERTELQKEKTGVFTGCYAKNPANGQAVPIWVADYVLGSYGTGAIMAVPAHDTRDFEFAMKYTIPISWVVRPDDSNCGNFEKPYSGEGSMINSSYSESGLDINGLPSKEAASRVVQWLEKSGNGKKKVNYKLRDWLFARQRYWGEPIPVIFLDDTGEGIPVPETELPLTLPELDDFTPTGTGEPPLAKADSWVITKDPLSEKPARRETNTMPQWAGSCWYYLRFMDPKNSSALVDKAQEQYWGPVDVYVGGAEHAVLHLLYA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="63371" PGL_stop="68573"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="63371" e_stop="63610"/>
            <exon e_start="67222" e_stop="68573"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.995" e_score="0.992"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="63371" e_stop="63610" e_length="240"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.995">
            <gDNA_intron_boundary i_start="63611" i_stop="67221" i_length="3611"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="67222" e_stop="68573" e_length="1352"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63371" stop="63610"/>
              <exon start="67222" stop="68573"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579714" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGTGATTCCTCATATGGGAAAAGGGGGTGGGGGGCTTAGAAGGAGGGTTTTGAAGCAACTTTTCCTTATCAAAAAATACTCAAAGATGGATCTAGAATTTGAAGTTAATTTGTAAAATTTTATTAGATTGGTGTGGATTTTTGGATGGATTGGGGGATTTGAATGAAGTTGAGAACAAAAAGGATGAAAGGATCAAAAAACATGGGTATGGAAGAATTGGAAGGGCTTATTCTTTCATG : GCAACAATGGTGAAGAGGGCCTAAGCTGCAAGAAATATGTATCAAAATTGTCCTTGGCCTAACACCTAAAAGAACACACAAGGACAATAGCAATAACCAAATACTAACTGCTACTGCTGCCAAAGAAAGTACTGCTATTTCTCTAAGCTATGTATGTGAGCTGCTCCAAATCTGTGACAACTTGGTTGATTGCATGAAGGACCATCTTCTTTATCTGTTACACCAGAGGATGAAACAAGTCAGTAAGAAATGGAGGCTTGTCTTAACATAGTCAGATTAAAATAAAGCATTTTTTATATGGCACCTCTAGTTTGTCTTCTCTGGCCTTGTGGCCTTTCGGCAATGTCCTGAACTCAGCTGTGAGGCGGAAACATTCTCGAATGTTTTCAGGAGAAACAAAATCAGCAGCAACTTTGGTACACGACTGGAAAGTTGAAAACAGATGGTTGGTTACTTGATGAACTTTATCATCTGGATTTTCATGGATTATTTAAGTATTGATTCTTACCTTGAGATTACGCACTTGGTGAGGGCATCCTGCAGGAATGAAAACTGACTCTCCAAGTCTTTGCTCAAATGTCCAAGGTTCAATCCCTAAAATAGTAAGCGTGCACATCTTGAGTTTATTAAATAAAATGTGATCCTTGTTATTGAGGAAAGATAACGAACAGGGTAAATTACTAACCGAATTCTTCCTTCAGTTTTCTCTTGTGCTCCAAAGTTAAGTAGAAGCTCTGGTCATGGATTGGATGAAAAACCTGATCAACCGGACAACAGAAAGTGTGCCTAAATTCCTTTGCATGCTTTAAAAGATACTCACTCAACTTGGGTACATCTTCCCTTCTGAAAATGTCCCACAATGCACCTCCAGTTGTCTCTGAATCATCAAAGGTTTTCTCCTCCCTGCTAATGTCACTAGACATCTTCATAGGATATTTATCAGCCTCGCATTCGATGCGCTCTCTTTCATCCTGAGCTCTATGCATCTGTTTCACTATTTCAATTGCCGACCGCTGCTCATCAGTTATAGCCATCTCTGCTGTGTGTGTCAAAATATTTATCTGAGCAATTCAAAATTTTAAAATATTAGCTTGTCATGAAATAAGCCTGAAAAAGTAATGGTTGCAGTCTTTGCAGGCTTCATCATGGACAGAATACAGAACTGGGAAAAGCAGTAAACTGCTACCAAGGTGAGAATAAACATTAAACTAGATTGTGGTATGTGGATTAATTTACCGGGAATGTGACAATTGTCGAACATATTGTATAGGACTGGCCATAAGGCAGAAGAGATTGGACGAATGTGGTTCTATATATTTGAAATAAAATTTTAGTTTTTTTTGCTCATTTTG</gDNA_template>
            <first_frame> L  *  F  L  I  W  E  K  G  V  G  G  L  E  G  G  F  *  S  N  F  S  L  S  K  N  T  Q  R  W  I  *  N  L  K  L  I  C  K  I  L  L  D  W  C  G  F  L  D  G  L  G  D  L  N  E  V  E  N  K  K  D  E  R  I  K  K  H  G  Y  G  R  I  G  R  A  Y  S  F  M  :  A  T  M  V  K  R  A  *  A  A  R  N  M  Y  Q  N  C  P  W  P  N  T  *  K  N  T  Q  G  Q  *  Q  *  P  N  T  N  C  Y  C  C  Q  R  K  Y  C  Y  F  S  K  L  C  M  *  A  A  P  N  L  *  Q  L  G  *  L  H  E  G  P  S  S  L  S  V  T  P  E  D  E  T  S  Q  *  E  M  E  A  C  L  N  I  V  R  L  K  *  S  I  F  Y  M  A  P  L  V  C  L  L  W  P  C  G  L  S  A  M  S  *  T  Q  L  *  G  G  N  I  L  E  C  F  Q  E  K  Q  N  Q  Q  Q  L  W  Y  T  T  G  K  L  K  T  D  G  W  L  L  D  E  L  Y  H  L  D  F  H  G  L  F  K  Y  *  F  L  P  *  D  Y  A  L  G  E  G  I  L  Q  E  *  K  L  T  L  Q  V  F  A  Q  M  S  K  V  Q  S  L  K  *  *  A  C  T  S  *  V  Y  *  I  K  C  D  P  C  Y  *  G  K  I  T  N  R  V  N  Y  *  P  N  S  S  F  S  F  L  L  C  S  K  V  K  *  K  L  W  S  W  I  G  *  K  T  *  S  T  G  Q  Q  K  V  C  L  N  S  F  A  C  F  K  R  Y  S  L  N  L  G  T  S  S  L  L  K  M  S  H  N  A  P  P  V  V  S  E  S  S  K  V  F  S  S  L  L  M  S  L  D  I  F  I  G  Y  L  S  A  S  H  S  M  R  S  L  S  S  *  A  L  C  I  C  F  T  I  S  I  A  D  R  C  S  S  V  I  A  I  S  A  V  C  V  K  I  F  I  *  A  I  Q  N  F  K  I  L  A  C  H  E  I  S  L  K  K  *  W  L  Q  S  L  Q  A  S  S  W  T  E  Y  R  T  G  K  S  S  K  L  L  P  R  *  E  *  T  L  N  *  I  V  V  C  G  L  I  Y  R  E  C  D  N  C  R  T  Y  C  I  G  L  A  I  R  Q  K  R  L  D  E  C  G  S  I  Y  L  K  *  N  F  S  F  F  C  S  F   </first_frame>
            <second_frame>  C  D  S  S  Y  G  K  R  G  W  G  A  *  K  E  G  F  E  A  T  F  P  Y  Q  K  I  L  K  D  G  S  R  I  *  S  *  F  V  K  F  Y  *  I  G  V  D  F  W  M  D  W  G  I  *  M  K  L  R  T  K  R  M  K  G  S  K  N  M  G  M  E  E  L  E  G  L  I  L  S  W :   Q  Q  W  *  R  G  P  K  L  Q  E  I  C  I  K  I  V  L  G  L  T  P  K  R  T  H  K  D  N  S  N  N  Q  I  L  T  A  T  A  A  K  E  S  T  A  I  S  L  S  Y  V  C  E  L  L  Q  I  C  D  N  L  V  D  C  M  K  D  H  L  L  Y  L  L  H  Q  R  M  K  Q  V  S  K  K  W  R  L  V  L  T  *  S  D  *  N  K  A  F  F  I  W  H  L  *  F  V  F  S  G  L  V  A  F  R  Q  C  P  E  L  S  C  E  A  E  T  F  S  N  V  F  R  R  N  K  I  S  S  N  F  G  T  R  L  E  S  *  K  Q  M  V  G  Y  L  M  N  F  I  I  W  I  F  M  D  Y  L  S  I  D  S  Y  L  E  I  T  H  L  V  R  A  S  C  R  N  E  N  *  L  S  K  S  L  L  K  C  P  R  F  N  P  *  N  S  K  R  A  H  L  E  F  I  K  *  N  V  I  L  V  I  E  E  R  *  R  T  G  *  I  T  N  R  I  L  P  S  V  F  S  C  A  P  K  L  S  R  S  S  G  H  G  L  D  E  K  P  D  Q  P  D  N  R  K  C  A  *  I  P  L  H  A  L  K  D  T  H  S  T  W  V  H  L  P  F  *  K  C  P  T  M  H  L  Q  L  S  L  N  H  Q  R  F  S  P  P  C  *  C  H  *  T  S  S  *  D  I  Y  Q  P  R  I  R  C  A  L  F  H  P  E  L  Y  A  S  V  S  L  F  Q  L  P  T  A  A  H  Q  L  *  P  S  L  L  C  V  S  K  Y  L  S  E  Q  F  K  I  L  K  Y  *  L  V  M  K  *  A  *  K  S  N  G  C  S  L  C  R  L  H  H  G  Q  N  T  E  L  G  K  A  V  N  C  Y  Q  G  E  N  K  H  *  T  R  L  W  Y  V  D  *  F  T  G  N  V  T  I  V  E  H  I  V  *  D  W  P  *  G  R  R  D  W  T  N  V  V  L  Y  I  *  N  K  I  L  V  F  F  A  H  F  </second_frame>
            <third_frame>   V  I  P  H  M  G  K  G  G  G  G  L  R  R  R  V  L  K  Q  L  F  L  I  K  K  Y  S  K  M  D  L  E  F  E  V  N  L  *  N  F  I  R  L  V  W  I  F  G  W  I  G  G  F  E  *  S  *  E  Q  K  G  *  K  D  Q  K  T  W  V  W  K  N  W  K  G  L  F  F  H   : G  N  N  G  E  E  G  L  S  C  K  K  Y  V  S  K  L  S  L  A  *  H  L  K  E  H  T  R  T  I  A  I  T  K  Y  *  L  L  L  L  P  K  K  V  L  L  F  L  *  A  M  Y  V  S  C  S  K  S  V  T  T  W  L  I  A  *  R  T  I  F  F  I  C  Y  T  R  G  *  N  K  S  V  R  N  G  G  L  S  *  H  S  Q  I  K  I  K  H  F  L  Y  G  T  S  S  L  S  S  L  A  L  W  P  F  G  N  V  L  N  S  A  V  R  R  K  H  S  R  M  F  S  G  E  T  K  S  A  A  T  L  V  H  D  W  K  V  E  N  R  W  L  V  T  *  *  T  L  S  S  G  F  S  W  I  I  *  V  L  I  L  T  L  R  L  R  T  W  *  G  H  P  A  G  M  K  T  D  S  P  S  L  C  S  N  V  Q  G  S  I  P  K  I  V  S  V  H  I  L  S  L  L  N  K  M  *  S  L  L  L  R  K  D  N  E  Q  G  K  L  L  T  E  F  F  L  Q  F  S  L  V  L  Q  S  *  V  E  A  L  V  M  D  W  M  K  N  L  I  N  R  T  T  E  S  V  P  K  F  L  C  M  L  *  K  I  L  T  Q  L  G  Y  I  F  P  S  E  N  V  P  Q  C  T  S  S  C  L  *  I  I  K  G  F  L  L  P  A  N  V  T  R  H  L  H  R  I  F  I  S  L  A  F  D  A  L  S  F  I  L  S  S  M  H  L  F  H  Y  F  N  C  R  P  L  L  I  S  Y  S  H  L  C  C  V  C  Q  N  I  Y  L  S  N  S  K  F  *  N  I  S  L  S  *  N  K  P  E  K  V  M  V  A  V  F  A  G  F  I  M  D  R  I  Q  N  W  E  K  Q  *  T  A  T  K  V  R  I  N  I  K  L  D  C  G  M  W  I  N  L  P  G  M  *  Q  L  S  N  I  L  Y  R  T  G  H  K  A  E  E  I  G  R  M  W  F  Y  I  F  E  I  K  F  *  F  F  L  L  I  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67235" stop="67492"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGPKLQEICIKIVLGLTPKRTHKDNSNNQILTATAAKESTAISLSYVCELLQICDNLVDCMKDHLLYLLHQRMKQVSKKWRLVLT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67984" stop="68196"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>STGQQKVCLNSFACFKRYSLNLGTSSLLKMSHNAPPVVSESSKVFSSLLMSLDIFIGYLSASHSMRSLSS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68103" stop="68303"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IIKGFLLPANVTRHLHRIFISLAFDALSFILSSMHLFHYFNCRPLLISYSHLCCVCQNIYLSNSKF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="68891" PGL_stop="67198"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68891" e_stop="68765"/>
            <exon e_start="68282" e_stop="67907"/>
            <exon e_start="67815" e_stop="67730"/>
            <exon e_start="67645" e_stop="67526"/>
            <exon e_start="67435" e_stop="67198"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.920" acc_prob="0.995" e_score="0.992"/>
          <exon-intron don_prob="0.986" acc_prob="0.821" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.348" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.926" e_score="1.000"/>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="68891" e_stop="68765" e_length="127"/>
          </exon>
          <intron i_serial="1" don_prob="0.920" acc_prob="0.995">
            <gDNA_intron_boundary i_start="68764" i_stop="68283" i_length="482"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="68282" e_stop="67907" e_length="376"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.821">
            <gDNA_intron_boundary i_start="67906" i_stop="67816" i_length="91"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="67815" e_stop="67730" e_length="86"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.348">
            <gDNA_intron_boundary i_start="67729" i_stop="67646" i_length="84"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="67645" e_stop="67526" e_length="120"/>
          </exon>
          <intron i_serial="4" don_prob="0.977" acc_prob="0.926">
            <gDNA_intron_boundary i_start="67525" i_stop="67436" i_length="90"/>
          </intron>
          <exon e_serial="5" e_score="0.983">
            <gDNA_exon_boundary e_start="67435" e_stop="67198" e_length="238"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68891" stop="68765"/>
              <exon start="68282" stop="67907"/>
              <exon start="67815" stop="67730"/>
              <exon start="67645" stop="67526"/>
              <exon start="67435" stop="67198"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581486" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTTAAATTACCGGCTGGAGTCATAAAACCAGATTTGGGTCCAAAGACATACATTGCTTATGGTCTCAGCGAGGAACTTGGGAGAGGGGATTCAGTGACAAAGCTTCACTGTGATATGTCAGATGCG : ATAAATATTTTGACACACACAGCAGAGATGGCTATAACTGATGAGCAGCGGTCGGCAATTGAAATAGTGAAACAGATGCATAGAGCTCAGGATGAAAGAGAGCGCATCGAATGCGAGGCTGATAAATATCCTATGAAGATGTCTAGTGACATTAGCAGGGAGGAGAAAACCTTTGATGATTCAGAGACAACTGGAGGTGCATTGTGGGACATTTTCAGAAGGGAAGATGTACCCAAGTTGAGTGAGTATCTTTTAAAGCATGCAAAGGAATTTAGGCACACTTTCTGTTGTCCGGTTGATCAGGTTTTTCATCCAATCCATGACCAGAGCTTCTACTTAACTTTGGAGCACAAGAGAAAACTGAAGGAAGAATTCG : GGATTGAACCTTGGACATTTGAGCAAAGACTTGGAGAGTCAGTTTTCATTCCTGCAGGATGCCCTCACCAAGTGCGTAATCTCAAG : TCGTGTACCAAAGTTGCTGCTGATTTTGTTTCTCCTGAAAACATTCGAGAATGTTTCCGCCTCACAGCTGAGTTCAGGACATTGCCGAAAGGCCACAAGGCCAGAGAAGACAAACTAGAG : ATAAAGAAGATGGTCCTTCATGCAATCAACCAAGTTGTCACAGATTTGGAGCAGCTCACATACATAGCTTAGAGAAATAGCAGTACTTTCTTTGGCAGCAGTAGCAGTTAGTATTTGGTTATTGCTATTGTCCTTGTGTGTTCTTTTAGGTGTTAGGCCAAGGACAATTTTGATACATATTTCTTGCAGCTTAGGCCCTCTTCACCATTGTTGCCTGTAGAAAAGTAAATGTTAAAGG</gDNA_template>
            <first_frame> C  *  I  T  G  W  S  H  K  T  R  F  G  S  K  D  I  H  C  L  W  S  Q  R  G  T  W  E  R  G  F  S  D  K  A  S  L  *  Y  V  R  C   : D  K  Y  F  D  T  H  S  R  D  G  Y  N  *  *  A  A  V  G  N  *  N  S  E  T  D  A  *  S  S  G  *  K  R  A  H  R  M  R  G  *  *  I  S  Y  E  D  V  *  *  H  *  Q  G  G  E  N  L  *  *  F  R  D  N  W  R  C  I  V  G  H  F  Q  K  G  R  C  T  Q  V  E  *  V  S  F  K  A  C  K  G  I  *  A  H  F  L  L  S  G  *  S  G  F  S  S  N  P  *  P  E  L  L  L  N  F  G  A  Q  E  K  T  E  G  R  I  R :   D  *  T  L  D  I  *  A  K  T  W  R  V  S  F  H  S  C  R  M  P  S  P  S  A  *  S  Q   : V  V  Y  Q  S  C  C  *  F  C  F  S  *  K  H  S  R  M  F  P  P  H  S  *  V  Q  D  I  A  E  R  P  Q  G  Q  R  R  Q  T  R   : D  K  E  D  G  P  S  C  N  Q  P  S  C  H  R  F  G  A  A  H  I  H  S  L  E  K  *  Q  Y  F  L  W  Q  Q  *  Q  L  V  F  G  Y  C  Y  C  P  C  V  F  F  *  V  L  G  Q  G  Q  F  *  Y  I  F  L  A  A  *  A  L  F  T  I  V  A  C  R  K  V  N  V  K   </first_frame>
            <second_frame>  V  K  L  P  A  G  V  I  K  P  D  L  G  P  K  T  Y  I  A  Y  G  L  S  E  E  L  G  R  G  D  S  V  T  K  L  H  C  D  M  S  D  A  :  I  N  I  L  T  H  T  A  E  M  A  I  T  D  E  Q  R  S  A  I  E  I  V  K  Q  M  H  R  A  Q  D  E  R  E  R  I  E  C  E  A  D  K  Y  P  M  K  M  S  S  D  I  S  R  E  E  K  T  F  D  D  S  E  T  T  G  G  A  L  W  D  I  F  R  R  E  D  V  P  K  L  S  E  Y  L  L  K  H  A  K  E  F  R  H  T  F  C  C  P  V  D  Q  V  F  H  P  I  H  D  Q  S  F  Y  L  T  L  E  H  K  R  K  L  K  E  E  F   : G  I  E  P  W  T  F  E  Q  R  L  G  E  S  V  F  I  P  A  G  C  P  H  Q  V  R  N  L  K  :  S  C  T  K  V  A  A  D  F  V  S  P  E  N  I  R  E  C  F  R  L  T  A  E  F  R  T  L  P  K  G  H  K  A  R  E  D  K  L  E  :  I  K  K  M  V  L  H  A  I  N  Q  V  V  T  D  L  E  Q  L  T  Y  I  A  *  R  N  S  S  T  F  F  G  S  S  S  S  *  Y  L  V  I  A  I  V  L  V  C  S  F  R  C  *  A  K  D  N  F  D  T  Y  F  L  Q  L  R  P  S  S  P  L  L  P  V  E  K  *  M  L  K  </second_frame>
            <third_frame>   L  N  Y  R  L  E  S  *  N  Q  I  W  V  Q  R  H  T  L  L  M  V  S  A  R  N  L  G  E  G  I  Q  *  Q  S  F  T  V  I  C  Q  M  R :   *  I  F  *  H  T  Q  Q  R  W  L  *  L  M  S  S  G  R  Q  L  K  *  *  N  R  C  I  E  L  R  M  K  E  S  A  S  N  A  R  L  I  N  I  L  *  R  C  L  V  T  L  A  G  R  R  K  P  L  M  I  Q  R  Q  L  E  V  H  C  G  T  F  S  E  G  K  M  Y  P  S  *  V  S  I  F  *  S  M  Q  R  N  L  G  T  L  S  V  V  R  L  I  R  F  F  I  Q  S  M  T  R  A  S  T  *  L  W  S  T  R  E  N  *  R  K  N  S  :  G  L  N  L  G  H  L  S  K  D  L  E  S  Q  F  S  F  L  Q  D  A  L  T  K  C  V  I  S  S :   R  V  P  K  L  L  L  I  L  F  L  L  K  T  F  E  N  V  S  A  S  Q  L  S  S  G  H  C  R  K  A  T  R  P  E  K  T  N  *  R :   *  R  R  W  S  F  M  Q  S  T  K  L  S  Q  I  W  S  S  S  H  T  *  L  R  E  I  A  V  L  S  L  A  A  V  A  V  S  I  W  L  L  L  L  S  L  C  V  L  L  G  V  R  P  R  T  I  L  I  H  I  S  C  S  L  G  P  L  H  H  C  C  L  *  K  S  K  C  *  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68890" stop="68765"/>
                    <exon start="68282" stop="67907"/>
                    <exon start="67815" stop="67730"/>
                    <exon start="67645" stop="67526"/>
                    <exon start="67435" stop="67364"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>777</number_coding_nucleotides>
                  <number_encoded_amino_acids>259</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKLPAGVIKPDLGPKTYIAYGLSEELGRGDSVTKLHCDMSDAINILTHTAEMAITDEQRSAIEIVKQMHRAQDERERIECEADKYPMKMSSDISREEKTFDDSETTGGALWDIFRREDVPKLSEYLLKHAKEFRHTFCCPVDQVFHPIHDQSFYLTLEHKRKLKEEFGIEPWTFEQRLGESVFIPAGCPHQVRNLKSCTKVAADFVSPENIRECFRLTAEFRTLPKGHKAREDKLEIKKMVLHAINQVVTDLEQLTYIA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="94113" PGL_stop="81715"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94113" e_stop="93494"/>
            <exon e_start="92675" e_stop="92355"/>
            <exon e_start="91467" e_stop="91321"/>
            <exon e_start="90800" e_stop="90674"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.919" acc_prob="1.000" e_score="0.908"/>
          <exon-intron don_prob="0.947" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.987" e_score="0.993"/>
          <exon-only e_score="0.953"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.908">
            <gDNA_exon_boundary e_start="94113" e_stop="93494" e_length="620"/>
          </exon>
          <intron i_serial="1" don_prob="0.919" acc_prob="1.000">
            <gDNA_intron_boundary i_start="93493" i_stop="92676" i_length="818"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92675" e_stop="92355" e_length="321"/>
          </exon>
          <intron i_serial="2" don_prob="0.947" acc_prob="0.994">
            <gDNA_intron_boundary i_start="92354" i_stop="91468" i_length="887"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="91467" e_stop="91321" e_length="147"/>
          </exon>
          <intron i_serial="3" don_prob="0.972" acc_prob="0.987">
            <gDNA_intron_boundary i_start="91320" i_stop="90801" i_length="520"/>
          </intron>
          <exon e_serial="4" e_score="0.953">
            <gDNA_exon_boundary e_start="90800" e_stop="90674" e_length="127"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94113" stop="93494"/>
              <exon start="92675" stop="92615"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594543" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94020" stop="93494"/>
              <exon start="92675" stop="92355"/>
              <exon start="91467" stop="91321"/>
              <exon start="90800" stop="90767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563767" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93633" stop="93494"/>
              <exon start="92675" stop="92355"/>
              <exon start="91467" stop="91321"/>
              <exon start="90800" stop="90674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594542" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACTCTAATTATAAAAAAAAAAAGAAAAAATTAATTCCATTATTTAATAGGAGTAGTGTTTATTTTATTTTATTTATTGCTCTAGACAATTGAAGAAGAGAGATCGATTCGTTTGTCAAAACAAAACAAAAAAAAAAAACGTTACCATCATTTCTCCTAACAGTATCTGTGCTGAAAAACACCTTTGCTTTCATCTTCAATCCTATCCCAACACAGTTCATGGACTTGTGTGCAAAAAACTTCAATTTTCTTGCATAGTTTTCATTATTATCCAAAACAGTGCAAGAAAAATATCTTCTTGATTTGGTGGGTGGTGTTCTGTTGGAAAAAACTAACTTGCCACTTTCTTTTCTTGAATTATTTTCCTATTATGGTGAATACATTTTCTTCTCAATATTATCCAAAATAACTACATTACGTTATTGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATA : GTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGG : GCTAAAAATCTTTGTTCCCATAACGTTGCTTGCATGGGCTATCCTGGTACCTGTAAATTGGACAAATAGCACTCTGACAAAATCCGACTTTACTTATAGTGACATTGATAAGCTTTCCATTTCAAATGTTCCGCTTGGATCTCTCAG : GTTTTGGACTCATATTGTTATGGCTTATGCCTTCTCATTCTGGACCTGCTATGTCTTAAAAACTGAGTATGCAAAAGTTGCAGCCATGAGGTTGCAGTTTGTCGCCTCTGAAAAACGTCGTCCCGAC</gDNA_template>
            <first_frame> N  S  N  Y  K  K  K  K  K  K  L  I  P  L  F  N  R  S  S  V  Y  F  I  L  F  I  A  L  D  N  *  R  R  E  I  D  S  F  V  K  T  K  Q  K  K  K  T  L  P  S  F  L  L  T  V  S  V  L  K  N  T  F  A  F  I  F  N  P  I  P  T  Q  F  M  D  L  C  A  K  N  F  N  F  L  A  *  F  S  L  L  S  K  T  V  Q  E  K  Y  L  L  D  L  V  G  G  V  L  L  E  K  T  N  L  P  L  S  F  L  E  L  F  S  Y  Y  G  E  Y  I  F  F  S  I  L  S  K  I  T  T  L  R  Y  C  D  L  V  G  F  W  F  I  R  G  W  S  L  V  K  V  E  E  R  G  K  S  D  N  C  W  L  L  W  S  F  E  V  I  V  L  L  R  S  A  I  A  T  L  L  L  C  Y  T  Q  Q  L  C  N  W  K  E  I  Y  N  H  N  S  Q  * :   Y  *  M  A  T  L  G  D  I  G  L  A  A  A  I  N  I  I  S  A  L  I  F  L  V  A  F  A  I  L  R  L  Q  P  F  N  D  R  V  Y  F  P  K  W  Y  L  K  G  L  R  H  S  P  T  H  S  G  A  F  V  A  K  F  V  N  V  D  W  R  A  Y  I  R  F  L  N  W  I  P  D  A  L  K  M  P  E  P  E  L  I  D  H  A  G  L  D  S  A  V  Y  L  R  I  Y  L  L  G :   L  K  I  F  V  P  I  T  L  L  A  W  A  I  L  V  P  V  N  W  T  N  S  T  L  T  K  S  D  F  T  Y  S  D  I  D  K  L  S  I  S  N  V  P  L  G  S  L  R :   F  W  T  H  I  V  M  A  Y  A  F  S  F  W  T  C  Y  V  L  K  T  E  Y  A  K  V  A  A  M  R  L  Q  F  V  A  S  E  K  R  R  P  D </first_frame>
            <second_frame>  T  L  I  I  K  K  K  R  K  N  *  F  H  Y  L  I  G  V  V  F  I  L  F  Y  L  L  L  *  T  I  E  E  E  R  S  I  R  L  S  K  Q  N  K  K  K  K  R  Y  H  H  F  S  *  Q  Y  L  C  *  K  T  P  L  L  S  S  S  I  L  S  Q  H  S  S  W  T  C  V  Q  K  T  S  I  F  L  H  S  F  H  Y  Y  P  K  Q  C  K  K  N  I  F  L  I  W  W  V  V  F  C  W  K  K  L  T  C  H  F  L  F  L  N  Y  F  P  I  M  V  N  T  F  S  S  Q  Y  Y  P  K  *  L  H  Y  V  I  V  T  W  W  G  F  G  L  L  G  V  G  V  *  L  K  *  K  K  G  E  K  V  T  T  V  G  F  Y  G  A  L  K  L  L  Y  F  S  D  R  L  L  L  L  C  C  S  V  I  L  S  S  S  V  I  G  K  R  F  I  I  T  T  H  N   : S  T  R  W  R  H  L  E  I  *  A  L  Q  Q  Q  *  I  L  Y  L  P  *  S  F  L  W  H  L  Q  F  C  G  S  N  H  S  M  T  E  F  I  S  P  N  G  I  L  R  G  *  D  T  V  P  P  T  L  G  H  S  S  P  N  L  L  M  L  I  G  E  H  I  *  G  F  *  T  G  Y  Q  M  L  *  K  C  L  N  L  S  L  L  T  M  Q  G  W  T  L  L  F  I  C  A  Y  T  C  *   : G  *  K  S  L  F  P  *  R  C  L  H  G  L  S  W  Y  L  *  I  G  Q  I  A  L  *  Q  N  P  T  L  L  I  V  T  L  I  S  F  P  F  Q  M  F  R  L  D  L  S   : G  F  G  L  I  L  L  W  L  M  P  S  H  S  G  P  A  M  S  *  K  L  S  M  Q  K  L  Q  P  *  G  C  S  L  S  P  L  K  N  V  V  P   </second_frame>
            <third_frame>   L  *  L  *  K  K  K  E  K  I  N  S  I  I  *  *  E  *  C  L  F  Y  F  I  Y  C  S  R  Q  L  K  K  R  D  R  F  V  C  Q  N  K  T  K  K  K  N  V  T  I  I  S  P  N  S  I  C  A  E  K  H  L  C  F  H  L  Q  S  Y  P  N  T  V  H  G  L  V  C  K  K  L  Q  F  S  C  I  V  F  I  I  I  Q  N  S  A  R  K  I  S  S  *  F  G  G  W  C  S  V  G  K  N  *  L  A  T  F  F  S  *  I  I  F  L  L  W  *  I  H  F  L  L  N  I  I  Q  N  N  Y  I  T  L  L  *  L  G  G  V  L  V  Y  *  G  L  E  F  S  *  S  R  R  K  G  K  K  *  Q  L  L  A  F  M  E  L  *  S  Y  C  T  S  P  I  G  Y  C  Y  S  A  A  L  L  Y  S  A  A  L  *  L  E  R  D  L  *  S  Q  L  T  I  :  V  L  D  G  D  T  W  R  Y  R  P  C  S  S  N  K  Y  Y  I  C  L  D  L  S  C  G  I  C  N  F  A  A  P  T  I  Q  *  Q  S  L  F  P  Q  M  V  S  *  G  A  E  T  Q  S  H  P  L  W  G  I  R  R  Q  I  C  *  C  *  L  E  S  I  Y  K  V  S  E  L  D  T  R  C  S  E  N  A  *  T  *  A  Y  *  P  C  R  V  G  L  C  C  L  F  A  H  I  L  A  R  :  A  K  N  L  C  S  H  N  V  A  C  M  G  Y  P  G  T  C  K  L  D  K  *  H  S  D  K  I  R  L  Y  L  *  *  H  *  *  A  F  H  F  K  C  S  A  W  I  S  Q  :  V  L  D  S  Y  C  Y  G  L  C  L  L  I  L  D  L  L  C  L  K  N  *  V  C  K  S  C  S  H  E  V  A  V  C  R  L  *  K  T  S  S  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92668" stop="92355"/>
                    <exon start="91467" stop="91321"/>
                    <exon start="90800" stop="90674"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>588</number_coding_nucleotides>
                  <number_encoded_amino_acids>196</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MATLGDIGLAAAINIISALIFLVAFAILRLQPFNDRVYFPKWYLKGLRHSPTHSGAFVAKFVNVDWRAYIRFLNWIPDALKMPEPELIDHAGLDSAVYLRIYLLGLKIFVPITLLAWAILVPVNWTNSTLTKSDFTYSDIDKLSISNVPLGSLRFWTHIVMAYAFSFWTCYVLKTEYAKVAAMRLQFVASEKRRPD</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93855" stop="92675"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSLLSKTVQEKYLLDLVGGVLLEKTNLPLSFLELFSYYGEYIFFSILSKITTLRYCDLVGFWFIRGWSLVKVEERGKSDNCWLLWSFEVIVLLRSAIATLLLCYTQQLCNWKEIYNHNSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="94113" e_stop="93494"/>
            <exon e_start="92675" e_stop="92355"/>
            <exon e_start="90800" e_stop="90665"/>
            <exon e_start="89371" e_stop="89270"/>
            <exon e_start="87751" e_stop="87632"/>
            <exon e_start="87479" e_stop="87399"/>
            <exon e_start="86564" e_stop="86224"/>
            <exon e_start="85314" e_stop="85069"/>
            <exon e_start="83954" e_stop="83630"/>
            <exon e_start="82646" e_stop="82413"/>
            <exon e_start="82281" e_stop="81715"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.919" acc_prob="1.000" e_score="0.908"/>
          <exon-intron don_prob="0.947" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.953" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.916" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.720" e_score="1.000"/>
          <exon-intron don_prob="0.915" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.908">
            <gDNA_exon_boundary e_start="94113" e_stop="93494" e_length="620"/>
          </exon>
          <intron i_serial="1" don_prob="0.919" acc_prob="1.000">
            <gDNA_intron_boundary i_start="93493" i_stop="92676" i_length="818"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="92675" e_stop="92355" e_length="321"/>
          </exon>
          <intron i_serial="2" don_prob="0.947" acc_prob="0.987">
            <gDNA_intron_boundary i_start="92354" i_stop="90801" i_length="1554"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="90800" e_stop="90665" e_length="136"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="90664" i_stop="89372" i_length="1293"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="89371" e_stop="89270" e_length="102"/>
          </exon>
          <intron i_serial="4" don_prob="0.953" acc_prob="0.996">
            <gDNA_intron_boundary i_start="89269" i_stop="87752" i_length="1518"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="87751" e_stop="87632" e_length="120"/>
          </exon>
          <intron i_serial="5" don_prob="0.995" acc_prob="0.997">
            <gDNA_intron_boundary i_start="87631" i_stop="87480" i_length="152"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="87479" e_stop="87399" e_length="81"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="87398" i_stop="86565" i_length="834"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="86564" e_stop="86224" e_length="341"/>
          </exon>
          <intron i_serial="7" don_prob="0.987" acc_prob="0.986">
            <gDNA_intron_boundary i_start="86223" i_stop="85315" i_length="909"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="85314" e_stop="85069" e_length="246"/>
          </exon>
          <intron i_serial="8" don_prob="0.916" acc_prob="0.996">
            <gDNA_intron_boundary i_start="85068" i_stop="83955" i_length="1114"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="83954" e_stop="83630" e_length="325"/>
          </exon>
          <intron i_serial="9" don_prob="0.998" acc_prob="0.720">
            <gDNA_intron_boundary i_start="83629" i_stop="82647" i_length="983"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="82646" e_stop="82413" e_length="234"/>
          </exon>
          <intron i_serial="10" don_prob="0.915" acc_prob="0.999">
            <gDNA_intron_boundary i_start="82412" i_stop="82282" i_length="131"/>
          </intron>
          <exon e_serial="11" e_score="0.991">
            <gDNA_exon_boundary e_start="82281" e_stop="81715" e_length="567"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94113" stop="93494"/>
              <exon start="92675" stop="92615"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U594543" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93690" stop="93494"/>
              <exon start="92675" stop="92355"/>
              <exon start="90800" stop="90665"/>
              <exon start="89371" stop="89270"/>
              <exon start="87751" stop="87632"/>
              <exon start="87479" stop="87399"/>
              <exon start="86564" stop="86224"/>
              <exon start="85314" stop="85069"/>
              <exon start="83954" stop="83630"/>
              <exon start="82646" stop="82413"/>
              <exon start="82281" stop="81715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563766" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACTCTAATTATAAAAAAAAAAAGAAAAAATTAATTCCATTATTTAATAGGAGTAGTGTTTATTTTATTTTATTTATTGCTCTAGACAATTGAAGAAGAGAGATCGATTCGTTTGTCAAAACAAAACAAAAAAAAAAAACGTTACCATCATTTCTCCTAACAGTATCTGTGCTGAAAAACACCTTTGCTTTCATCTTCAATCCTATCCCAACACAGTTCATGGACTTGTGTGCAAAAAACTTCAATTTTCTTGCATAGTTTTCATTATTATCCAAAACAGTGCAAGAAAAATATCTTCTTGATTTGGTGGGTGGTGTTCTGTTGGAAAAAACTAACTTGCCACTTTCTTTTCTTGAATTATTTTCCTATTATGGTGAATACATTTTCTTCTCAATATTATCCAAAATAACTACATTACGTTATTGTGACTTGGTGGGGTTTTGGTTTATTAGGGGTTGGAGTTTAGTTAAAGTAGAAGAAAGGGGAAAAAGTGACAACTGTTGGCTTTTATGGAGCTTTGAAGTTATTGTACTTCTCCGATCGGCTATTGCTACTCTGCTGCTCTGTTATACTCAGCAGCTCTGTAATTGGAAAGAGATTTATAATCACAACTCACAATA : GTACTAGATGGCGACACTTGGAGATATAGGCCTTGCAGCAGCAATAAATATTATATCTGCCTTGATCTTTCTTGTGGCATTTGCAATTTTGCGGCTCCAACCATTCAATGACAGAGTTTATTTCCCCAAATGGTATCTTAAGGGGCTGAGACACAGTCCCACCCACTCTGGGGCATTCGTCGCCAAATTTGTTAATGTTGATTGGAGAGCATATATAAGGTTTCTGAACTGGATACCAGATGCTCTGAAAATGCCTGAACCTGAGCTTATTGACCATGCAGGGTTGGACTCTGCTGTTTATTTGCGCATATACTTGCTAGG : GTTTTGGACTCATATTGTTATGGCTTATGCCTTCTCATTCTGGACCTGCTATGTCTTAAAAACTGAGTATGCAAAAGTTGCAGCCATGAGGTTGCAGTTTGTCGCCTCTGAAAAACGTCGTCCCGACCAATATACA : GTCCTTGTTAGGAATGTTCCGCCAGATGCTGATGAATCAGTTAGTGAATGTGTGGAGCACTTTTTCCTGGTTAACCATCAAGATCATTATCTCATGCATCAG : GGTGTTTATAATGCCAACAAACTGGCAAAATTGGTGAAGGAGAAGAAGAGTAAGCAAAATTGGCTCGACTATTACCAACTTAAGTACTCTAGGGATCAATCAAAACGGCCTATGATGAAG : ACTGGTTTCCTTGGATGCTTTGGAGCAAAAGTCGACGCAATTGAGCATCAGATTGCTGAAATTGAAAGATTGACAAAAGAG : ATAGCTGAAGAGAAACAAAGGGTAGAAAAAGACCCAAAGTCTACCATGCCTGCATCATTTGTCTCCTTCAAATCGCGGTGGGGTGCTGCTGTTTGTGCACAAACACAGCAATCCAGAAATCCAACCTTGTGGTTGACAGAATGGGCTCCAGAGCCACGTGATGTATTTTGGGATAACCTGGCAATCCCCTATGTTTCTTTGACAATTAGGAAGCTCATCATTGCTGTTGCCTTCTTTTTTCTGACATTCTTCTTCATGATCCCGATTGCATTTGTCCAAACCCTTGCCAGCCTTGAGGGGATTAGGAAGAAAGCACCATTTCTGAAAGTTATTATTGACGA : ACCTTTCATCAAGGCGTTCATCCAAGGTTTTCTACCTGGGATTGCTTTGAAGATCTTTCTCATATTTCTGCCAACTATATTGATGATGATGTCCAAATTCGAGGGCTGGCTAAGCATATCAGCTCTAGAGAGGAAATCTGCGTCTAAATACTACATCTTCACTATCGTGAATGTGTTCCTCGGGAACATAATTGCAGGAGCTGCATTTGAACAACTAAGTACCTTTCTCAATCAGTCGGCAAACCA : AATCCCTAAAACGATTGGTGTCGCAGTTCCTATGAAAGCATCCTTCTTCATAACCTACATAATGGTTGACGGCTGGGCTGGTATTGCTGGAGAGATCCTAAGGCTGAAGCCGCTAATATTTTACCACTTGAAGAACTTTTTCTTGGTTAAGACGGAAAAAGATAGAGAAGAGGCAATGGATCCTGGAAGCGTTGGTTTCAACACAGGAGAACCACAGATACAATTATATTTCTTATTGGGGCTTGTCTATGCTGTGGTCACACCATTTCTGCTTCCGTTCATATTGGTCTTCTTTGGCCTTGCATATGTAGTATATCGTCATCAG : ATTATAAATGTTTACAATCAGGAGTACGAAAGTGCAGCAGCATTCTGGCCAGATGTTCATGGACGTATAATTTTCGCACTGTGCTTTTCTCAGTTATCTTTACTAGGCTTGCTAAGTACAAAACATGCTACTCAGTCAGCACCTTTCCTGATTGCCCTTCCAGTGCTGACCATCTCATTTCACTTGTACTGCAAAGGTCGTTATGAGCCAGCTTTCACCAAATATCCGATACAG : GAAGCAAGGATGAGAGATACTCTGGAACAAGCAAGGGAACCAAATCTTAATCTGAAGGGCTACCTTCAAAATGCTTATGTGCATCCTGTTTTCAAAGACGACGATGAAGATGAGGATGAAGACTTTATGATGAAACTGGAGAACGATAGCGTTCTTGTCCCCACAAAACGCCAGTCAAGAATGAATACACCAGTTCCCAGCAAAGTCAGCGCTGGCTCATCTCCATCACTTCCTGATGCAGTTACTCATGAACATTAAACAGCTTAGAATGATAGGTTGGAATATTTCACCTCCTTTGTGCATGAGAGTTAGATCGCGGAGACTCAACCTTAACTAAGTTGTACAGAGAGCACTTCAACACATCATAGTTGAGCTGGCTGGACCAGTTTACATTGGGACGGTTGGCGTTGAAAGTACAAAAAATTGTAAAGAGCTCCGGTGGTAGCATTAGAAGTTTTGTACACTTAAGGATGTTCATATTTTTAGCATTTGCTGGTTGTTGACACTCAGGATATAATCTTGTACACGAGCTTTCTAAGGGAATGTATTTATTTTTATCGATCTTAG</gDNA_template>
            <first_frame> N  S  N  Y  K  K  K  K  K  K  L  I  P  L  F  N  R  S  S  V  Y  F  I  L  F  I  A  L  D  N  *  R  R  E  I  D  S  F  V  K  T  K  Q  K  K  K  T  L  P  S  F  L  L  T  V  S  V  L  K  N  T  F  A  F  I  F  N  P  I  P  T  Q  F  M  D  L  C  A  K  N  F  N  F  L  A  *  F  S  L  L  S  K  T  V  Q  E  K  Y  L  L  D  L  V  G  G  V  L  L  E  K  T  N  L  P  L  S  F  L  E  L  F  S  Y  Y  G  E  Y  I  F  F  S  I  L  S  K  I  T  T  L  R  Y  C  D  L  V  G  F  W  F  I  R  G  W  S  L  V  K  V  E  E  R  G  K  S  D  N  C  W  L  L  W  S  F  E  V  I  V  L  L  R  S  A  I  A  T  L  L  L  C  Y  T  Q  Q  L  C  N  W  K  E  I  Y  N  H  N  S  Q  * :   Y  *  M  A  T  L  G  D  I  G  L  A  A  A  I  N  I  I  S  A  L  I  F  L  V  A  F  A  I  L  R  L  Q  P  F  N  D  R  V  Y  F  P  K  W  Y  L  K  G  L  R  H  S  P  T  H  S  G  A  F  V  A  K  F  V  N  V  D  W  R  A  Y  I  R  F  L  N  W  I  P  D  A  L  K  M  P  E  P  E  L  I  D  H  A  G  L  D  S  A  V  Y  L  R  I  Y  L  L  G :   F  W  T  H  I  V  M  A  Y  A  F  S  F  W  T  C  Y  V  L  K  T  E  Y  A  K  V  A  A  M  R  L  Q  F  V  A  S  E  K  R  R  P  D  Q  Y  T  :  V  L  V  R  N  V  P  P  D  A  D  E  S  V  S  E  C  V  E  H  F  F  L  V  N  H  Q  D  H  Y  L  M  H  Q  :  G  V  Y  N  A  N  K  L  A  K  L  V  K  E  K  K  S  K  Q  N  W  L  D  Y  Y  Q  L  K  Y  S  R  D  Q  S  K  R  P  M  M  K  :  T  G  F  L  G  C  F  G  A  K  V  D  A  I  E  H  Q  I  A  E  I  E  R  L  T  K  E  :  I  A  E  E  K  Q  R  V  E  K  D  P  K  S  T  M  P  A  S  F  V  S  F  K  S  R  W  G  A  A  V  C  A  Q  T  Q  Q  S  R  N  P  T  L  W  L  T  E  W  A  P  E  P  R  D  V  F  W  D  N  L  A  I  P  Y  V  S  L  T  I  R  K  L  I  I  A  V  A  F  F  F  L  T  F  F  F  M  I  P  I  A  F  V  Q  T  L  A  S  L  E  G  I  R  K  K  A  P  F  L  K  V  I  I  D  E :   P  F  I  K  A  F  I  Q  G  F  L  P  G  I  A  L  K  I  F  L  I  F  L  P  T  I  L  M  M  M  S  K  F  E  G  W  L  S  I  S  A  L  E  R  K  S  A  S  K  Y  Y  I  F  T  I  V  N  V  F  L  G  N  I  I  A  G  A  A  F  E  Q  L  S  T  F  L  N  Q  S  A  N  Q :   I  P  K  T  I  G  V  A  V  P  M  K  A  S  F  F  I  T  Y  I  M  V  D  G  W  A  G  I  A  G  E  I  L  R  L  K  P  L  I  F  Y  H  L  K  N  F  F  L  V  K  T  E  K  D  R  E  E  A  M  D  P  G  S  V  G  F  N  T  G  E  P  Q  I  Q  L  Y  F  L  L  G  L  V  Y  A  V  V  T  P  F  L  L  P  F  I  L  V  F  F  G  L  A  Y  V  V  Y  R  H  Q  :  I  I  N  V  Y  N  Q  E  Y  E  S  A  A  A  F  W  P  D  V  H  G  R  I  I  F  A  L  C  F  S  Q  L  S  L  L  G  L  L  S  T  K  H  A  T  Q  S  A  P  F  L  I  A  L  P  V  L  T  I  S  F  H  L  Y  C  K  G  R  Y  E  P  A  F  T  K  Y  P  I  Q  :  E  A  R  M  R  D  T  L  E  Q  A  R  E  P  N  L  N  L  K  G  Y  L  Q  N  A  Y  V  H  P  V  F  K  D  D  D  E  D  E  D  E  D  F  M  M  K  L  E  N  D  S  V  L  V  P  T  K  R  Q  S  R  M  N  T  P  V  P  S  K  V  S  A  G  S  S  P  S  L  P  D  A  V  T  H  E  H  *  T  A  *  N  D  R  L  E  Y  F  T  S  F  V  H  E  S  *  I  A  E  T  Q  P  *  L  S  C  T  E  S  T  S  T  H  H  S  *  A  G  W  T  S  L  H  W  D  G  W  R  *  K  Y  K  K  L  *  R  A  P  V  V  A  L  E  V  L  Y  T  *  G  C  S  Y  F  *  H  L  L  V  V  D  T  Q  D  I  I  L  Y  T  S  F  L  R  E  C  I  Y  F  Y  R  S  * </first_frame>
            <second_frame>  T  L  I  I  K  K  K  R  K  N  *  F  H  Y  L  I  G  V  V  F  I  L  F  Y  L  L  L  *  T  I  E  E  E  R  S  I  R  L  S  K  Q  N  K  K  K  K  R  Y  H  H  F  S  *  Q  Y  L  C  *  K  T  P  L  L  S  S  S  I  L  S  Q  H  S  S  W  T  C  V  Q  K  T  S  I  F  L  H  S  F  H  Y  Y  P  K  Q  C  K  K  N  I  F  L  I  W  W  V  V  F  C  W  K  K  L  T  C  H  F  L  F  L  N  Y  F  P  I  M  V  N  T  F  S  S  Q  Y  Y  P  K  *  L  H  Y  V  I  V  T  W  W  G  F  G  L  L  G  V  G  V  *  L  K  *  K  K  G  E  K  V  T  T  V  G  F  Y  G  A  L  K  L  L  Y  F  S  D  R  L  L  L  L  C  C  S  V  I  L  S  S  S  V  I  G  K  R  F  I  I  T  T  H  N   : S  T  R  W  R  H  L  E  I  *  A  L  Q  Q  Q  *  I  L  Y  L  P  *  S  F  L  W  H  L  Q  F  C  G  S  N  H  S  M  T  E  F  I  S  P  N  G  I  L  R  G  *  D  T  V  P  P  T  L  G  H  S  S  P  N  L  L  M  L  I  G  E  H  I  *  G  F  *  T  G  Y  Q  M  L  *  K  C  L  N  L  S  L  L  T  M  Q  G  W  T  L  L  F  I  C  A  Y  T  C  *   : G  F  G  L  I  L  L  W  L  M  P  S  H  S  G  P  A  M  S  *  K  L  S  M  Q  K  L  Q  P  *  G  C  S  L  S  P  L  K  N  V  V  P  T  N  I  Q :   S  L  L  G  M  F  R  Q  M  L  M  N  Q  L  V  N  V  W  S  T  F  S  W  L  T  I  K  I  I  I  S  C  I  R :   V  F  I  M  P  T  N  W  Q  N  W  *  R  R  R  R  V  S  K  I  G  S  T  I  T  N  L  S  T  L  G  I  N  Q  N  G  L  *  *  R :   L  V  S  L  D  A  L  E  Q  K  S  T  Q  L  S  I  R  L  L  K  L  K  D  *  Q  K  R :   *  L  K  R  N  K  G  *  K  K  T  Q  S  L  P  C  L  H  H  L  S  P  S  N  R  G  G  V  L  L  F  V  H  K  H  S  N  P  E  I  Q  P  C  G  *  Q  N  G  L  Q  S  H  V  M  Y  F  G  I  T  W  Q  S  P  M  F  L  *  Q  L  G  S  S  S  L  L  L  P  S  F  F  *  H  S  S  S  *  S  R  L  H  L  S  K  P  L  P  A  L  R  G  L  G  R  K  H  H  F  *  K  L  L  L  T   : N  L  S  S  R  R  S  S  K  V  F  Y  L  G  L  L  *  R  S  F  S  Y  F  C  Q  L  Y  *  *  *  C  P  N  S  R  A  G  *  A  Y  Q  L  *  R  G  N  L  R  L  N  T  T  S  S  L  S  *  M  C  S  S  G  T  *  L  Q  E  L  H  L  N  N  *  V  P  F  S  I  S  R  Q  T   : K  S  L  K  R  L  V  S  Q  F  L  *  K  H  P  S  S  *  P  T  *  W  L  T  A  G  L  V  L  L  E  R  S  *  G  *  S  R  *  Y  F  T  T  *  R  T  F  S  W  L  R  R  K  K  I  E  K  R  Q  W  I  L  E  A  L  V  S  T  Q  E  N  H  R  Y  N  Y  I  S  Y  W  G  L  S  M  L  W  S  H  H  F  C  F  R  S  Y  W  S  S  L  A  L  H  M  *  Y  I  V  I  R :   L  *  M  F  T  I  R  S  T  K  V  Q  Q  H  S  G  Q  M  F  M  D  V  *  F  S  H  C  A  F  L  S  Y  L  Y  *  A  C  *  V  Q  N  M  L  L  S  Q  H  L  S  *  L  P  F  Q  C  *  P  S  H  F  T  C  T  A  K  V  V  M  S  Q  L  S  P  N  I  R  Y  R :   K  Q  G  *  E  I  L  W  N  K  Q  G  N  Q  I  L  I  *  R  A  T  F  K  M  L  M  C  I  L  F  S  K  T  T  M  K  M  R  M  K  T  L  *  *  N  W  R  T  I  A  F  L  S  P  Q  N  A  S  Q  E  *  I  H  Q  F  P  A  K  S  A  L  A  H  L  H  H  F  L  M  Q  L  L  M  N  I  K  Q  L  R  M  I  G  W  N  I  S  P  P  L  C  M  R  V  R  S  R  R  L  N  L  N  *  V  V  Q  R  A  L  Q  H  I  I  V  E  L  A  G  P  V  Y  I  G  T  V  G  V  E  S  T  K  N  C  K  E  L  R  W  *  H  *  K  F  C  T  L  K  D  V  H  I  F  S  I  C  W  L  L  T  L  R  I  *  S  C  T  R  A  F  *  G  N  V  F  I  F  I  D  L   </second_frame>
            <third_frame>   L  *  L  *  K  K  K  E  K  I  N  S  I  I  *  *  E  *  C  L  F  Y  F  I  Y  C  S  R  Q  L  K  K  R  D  R  F  V  C  Q  N  K  T  K  K  K  N  V  T  I  I  S  P  N  S  I  C  A  E  K  H  L  C  F  H  L  Q  S  Y  P  N  T  V  H  G  L  V  C  K  K  L  Q  F  S  C  I  V  F  I  I  I  Q  N  S  A  R  K  I  S  S  *  F  G  G  W  C  S  V  G  K  N  *  L  A  T  F  F  S  *  I  I  F  L  L  W  *  I  H  F  L  L  N  I  I  Q  N  N  Y  I  T  L  L  *  L  G  G  V  L  V  Y  *  G  L  E  F  S  *  S  R  R  K  G  K  K  *  Q  L  L  A  F  M  E  L  *  S  Y  C  T  S  P  I  G  Y  C  Y  S  A  A  L  L  Y  S  A  A  L  *  L  E  R  D  L  *  S  Q  L  T  I  :  V  L  D  G  D  T  W  R  Y  R  P  C  S  S  N  K  Y  Y  I  C  L  D  L  S  C  G  I  C  N  F  A  A  P  T  I  Q  *  Q  S  L  F  P  Q  M  V  S  *  G  A  E  T  Q  S  H  P  L  W  G  I  R  R  Q  I  C  *  C  *  L  E  S  I  Y  K  V  S  E  L  D  T  R  C  S  E  N  A  *  T  *  A  Y  *  P  C  R  V  G  L  C  C  L  F  A  H  I  L  A  R  :  V  L  D  S  Y  C  Y  G  L  C  L  L  I  L  D  L  L  C  L  K  N  *  V  C  K  S  C  S  H  E  V  A  V  C  R  L  *  K  T  S  S  R  P  I  Y   : S  P  C  *  E  C  S  A  R  C  *  *  I  S  *  *  M  C  G  A  L  F  P  G  *  P  S  R  S  L  S  H  A  S   : G  C  L  *  C  Q  Q  T  G  K  I  G  E  G  E  E  E  *  A  K  L  A  R  L  L  P  T  *  V  L  *  G  S  I  K  T  A  Y  D  E   : D  W  F  P  W  M  L  W  S  K  S  R  R  N  *  A  S  D  C  *  N  *  K  I  D  K  R   : D  S  *  R  E  T  K  G  R  K  R  P  K  V  Y  H  A  C  I  I  C  L  L  Q  I  A  V  G  C  C  C  L  C  T  N  T  A  I  Q  K  S  N  L  V  V  D  R  M  G  S  R  A  T  *  C  I  L  G  *  P  G  N  P  L  C  F  F  D  N  *  E  A  H  H  C  C  C  L  L  F  S  D  I  L  L  H  D  P  D  C  I  C  P  N  P  C  Q  P  *  G  D  *  E  E  S  T  I  S  E  S  Y  Y  *  R  :  T  F  H  Q  G  V  H  P  R  F  S  T  W  D  C  F  E  D  L  S  H  I  S  A  N  Y  I  D  D  D  V  Q  I  R  G  L  A  K  H  I  S  S  R  E  E  I  C  V  *  I  L  H  L  H  Y  R  E  C  V  P  R  E  H  N  C  R  S  C  I  *  T  T  K  Y  L  S  Q  S  V  G  K  P  :  N  P  *  N  D  W  C  R  S  S  Y  E  S  I  L  L  H  N  L  H  N  G  *  R  L  G  W  Y  C  W  R  D  P  K  A  E  A  A  N  I  L  P  L  E  E  L  F  L  G  *  D  G  K  R  *  R  R  G  N  G  S  W  K  R  W  F  Q  H  R  R  T  T  D  T  I  I  F  L  I  G  A  C  L  C  C  G  H  T  I  S  A  S  V  H  I  G  L  L  W  P  C  I  C  S  I  S  S  S   : D  Y  K  C  L  Q  S  G  V  R  K  C  S  S  I  L  A  R  C  S  W  T  Y  N  F  R  T  V  L  F  S  V  I  F  T  R  L  A  K  Y  K  T  C  Y  S  V  S  T  F  P  D  C  P  S  S  A  D  H  L  I  S  L  V  L  Q  R  S  L  *  A  S  F  H  Q  I  S  D  T   : G  S  K  D  E  R  Y  S  G  T  S  K  G  T  K  S  *  S  E  G  L  P  S  K  C  L  C  A  S  C  F  Q  R  R  R  *  R  *  G  *  R  L  Y  D  E  T  G  E  R  *  R  S  C  P  H  K  T  P  V  K  N  E  Y  T  S  S  Q  Q  S  Q  R  W  L  I  S  I  T  S  *  C  S  Y  S  *  T  L  N  S  L  E  *  *  V  G  I  F  H  L  L  C  A  *  E  L  D  R  G  D  S  T  L  T  K  L  Y  R  E  H  F  N  T  S  *  L  S  W  L  D  Q  F  T  L  G  R  L  A  L  K  V  Q  K  I  V  K  S  S  G  G  S  I  R  S  F  V  H  L  R  M  F  I  F  L  A  F  A  G  C  *  H  S  G  Y  N  L  V  H  E  L  S  K  G  M  Y  L  F  L  S  I  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="92668" stop="92355"/>
                    <exon start="90800" stop="90665"/>
                    <exon start="89371" stop="89270"/>
                    <exon start="87751" stop="87632"/>
                    <exon start="87479" stop="87399"/>
                    <exon start="86564" stop="86224"/>
                    <exon start="85314" stop="85069"/>
                    <exon start="83954" stop="83630"/>
                    <exon start="82646" stop="82413"/>
                    <exon start="82281" stop="82024"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>2154</number_coding_nucleotides>
                  <number_encoded_amino_acids>718</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MATLGDIGLAAAINIISALIFLVAFAILRLQPFNDRVYFPKWYLKGLRHSPTHSGAFVAKFVNVDWRAYIRFLNWIPDALKMPEPELIDHAGLDSAVYLRIYLLGFWTHIVMAYAFSFWTCYVLKTEYAKVAAMRLQFVASEKRRPDQYTVLVRNVPPDADESVSECVEHFFLVNHQDHYLMHQGVYNANKLAKLVKEKKSKQNWLDYYQLKYSRDQSKRPMMKTGFLGCFGAKVDAIEHQIAEIERLTKEIAEEKQRVEKDPKSTMPASFVSFKSRWGAAVCAQTQQSRNPTLWLTEWAPEPRDVFWDNLAIPYVSLTIRKLIIAVAFFFLTFFFMIPIAFVQTLASLEGIRKKAPFLKVIIDEPFIKAFIQGFLPGIALKIFLIFLPTILMMMSKFEGWLSISALERKSASKYYIFTIVNVFLGNIIAGAAFEQLSTFLNQSANQIPKTIGVAVPMKASFFITYIMVDGWAGIAGEILRLKPLIFYHLKNFFLVKTEKDREEAMDPGSVGFNTGEPQIQLYFLLGLVYAVVTPFLLPFILVFFGLAYVVYRHQIINVYNQEYESAAAFWPDVHGRIIFALCFSQLSLLGLLSTKHATQSAPFLIALPVLTISFHLYCKGRYEPAFTKYPIQEARMRDTLEQAREPNLNLKGYLQNAYVHPVFKDDDEDEDEDFMMKLENDSVLVPTKRQSRMNTPVPSKVSAGSSPSLPDAVTHEH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93855" stop="92675"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSLLSKTVQEKYLLDLVGGVLLEKTNLPLSFLELFSYYGEYIFFSILSKITTLRYCDLVGFWFIRGWSLVKVEERGKSDNCWLLWSFEVIVLLRSAIATLLLCYTQQLCNWKEIYNHNSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="105458" PGL_stop="104865"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105458" e_stop="104865"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="105458" e_stop="104865" e_length="594"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105458" stop="104865"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603840" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTTGTCAAGTGTCAACTAACACAACCATATTTTCATCCATTGGCATCTTTCATTCAAGATTCTAAAAAGAGTTCAAAAAATCTCAACCCATTTTTCAACTAGTACATAGTTGAAAATCAGATGATTTTTTTTCAAGAAAATAGAAGCTTTGAGTTGGTTTTAGGCCTTTTAGTGTTAAACATTTTGTGGGTGGGGGTTAAATCCCAGTGTAGTGATGATTGTGATGCATTAGCTTCATTTTATGTATGGAATGGTGCTAACCTCACTTTTATGTCTAATACTTTTTCAACCCCCATCAAGAATATCCTTAGTTATAATCCTCAGATAACCAATCCAGATATTATTCAATCCCAAAGCAGAGTTAATGTTCCCTTCTCATGTAGCTGTGTTGATGGGAAATTCATGGGACATCAGTTTGATGTGCAGGTCAAGACTAATACTACTTATCCGAGAATCACTCGTCTTTATTGTTCGAACCTTACAACAGTTGAAAAGTTGCAGGAGTCTAACAGTTATGATCCTAACAATGTTCCTGTGAATTCAATAGTAAAGGTTATTGTCAACTGCTCTTGTGGAAATAGTCATGTGTCAAA</gDNA_template>
            <first_frame> S  C  Q  V  S  T  N  T  T  I  F  S  S  I  G  I  F  H  S  R  F  *  K  E  F  K  K  S  Q  P  I  F  Q  L  V  H  S  *  K  S  D  D  F  F  S  R  K  *  K  L  *  V  G  F  R  P  F  S  V  K  H  F  V  G  G  G  *  I  P  V  *  *  *  L  *  C  I  S  F  I  L  C  M  E  W  C  *  P  H  F  Y  V  *  Y  F  F  N  P  H  Q  E  Y  P  *  L  *  S  S  D  N  Q  S  R  Y  Y  S  I  P  K  Q  S  *  C  S  L  L  M  *  L  C  *  W  E  I  H  G  T  S  V  *  C  A  G  Q  D  *  Y  Y  L  S  E  N  H  S  S  L  L  F  E  P  Y  N  S  *  K  V  A  G  V  *  Q  L  *  S  *  Q  C  S  C  E  F  N  S  K  G  Y  C  Q  L  L  L  W  K  *  S  C  V  K </first_frame>
            <second_frame>  V  V  K  C  Q  L  T  Q  P  Y  F  H  P  L  A  S  F  I  Q  D  S  K  K  S  S  K  N  L  N  P  F  F  N  *  Y  I  V  E  N  Q  M  I  F  F  Q  E  N  R  S  F  E  L  V  L  G  L  L  V  L  N  I  L  W  V  G  V  K  S  Q  C  S  D  D  C  D  A  L  A  S  F  Y  V  W  N  G  A  N  L  T  F  M  S  N  T  F  S  T  P  I  K  N  I  L  S  Y  N  P  Q  I  T  N  P  D  I  I  Q  S  Q  S  R  V  N  V  P  F  S  C  S  C  V  D  G  K  F  M  G  H  Q  F  D  V  Q  V  K  T  N  T  T  Y  P  R  I  T  R  L  Y  C  S  N  L  T  T  V  E  K  L  Q  E  S  N  S  Y  D  P  N  N  V  P  V  N  S  I  V  K  V  I  V  N  C  S  C  G  N  S  H  V  S   </second_frame>
            <third_frame>   L  S  S  V  N  *  H  N  H  I  F  I  H  W  H  L  S  F  K  I  L  K  R  V  Q  K  I  S  T  H  F  S  T  S  T  *  L  K  I  R  *  F  F  F  K  K  I  E  A  L  S  W  F  *  A  F  *  C  *  T  F  C  G  W  G  L  N  P  S  V  V  M  I  V  M  H  *  L  H  F  M  Y  G  M  V  L  T  S  L  L  C  L  I  L  F  Q  P  P  S  R  I  S  L  V  I  I  L  R  *  P  I  Q  I  L  F  N  P  K  A  E  L  M  F  P  S  H  V  A  V  L  M  G  N  S  W  D  I  S  L  M  C  R  S  R  L  I  L  L  I  R  E  S  L  V  F  I  V  R  T  L  Q  Q  L  K  S  C  R  S  L  T  V  M  I  L  T  M  F  L  *  I  Q  *  *  R  L  L  S  T  A  L  V  E  I  V  M  C  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105355" stop="104867"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>489</number_coding_nucleotides>
                  <number_encoded_amino_acids>163</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YIVENQMIFFQENRSFELVLGLLVLNILWVGVKSQCSDDCDALASFYVWNGANLTFMSNTFSTPIKNILSYNPQITNPDIIQSQSRVNVPFSCSCVDGKFMGHQFDVQVKTNTTYPRITRLYCSNLTTVEKLQESNSYDPNNVPVNSIVKVIVNCSCGNSHVS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="111997" PGL_stop="111276"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="111997" e_stop="111276"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.940"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.940">
            <gDNA_exon_boundary e_start="111997" e_stop="111276" e_length="722"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111997" stop="111276"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U577328" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTGTTGGGTTATGGGTCTTTTTTTCCCTTCCTATGTGGATAAATAAAAGCCCAATTTGGACCAACCCATTTTTGCCCATAGGCCCATTATTATGAGGCAAATATAAACCTATTTAGGGTCTTATTTTCAGACATACAGAGAGAGTTTTTCAGCAGCCAAAAGAGAGAAAAAAGAGAGAAATTCGCAGTCAAAAATCCAGCCATAACAACCAACTTCAAATTGCGATTCCCGCTTCGTTTCTTGTCCGATTGAGCTGATTTTTGGACAGCATATTATCTTCATCTCAATCTTTGATTAGGAACTGACAGAGTTGGATTTGGTGGTCTGCAACTTCAGTTTTGCTGTCGTGAACAGTAGCTGCGAAATTGGTGATTTTGCTCCTTTAATTCTCTAGATTTGGTGCAGTCTTATTTTGTTGTTGCTCGTTGTTTGGCACTTTGTTTTGTGGCCAATTTTGGAGAACAATATTGTAACTCTTGGTGATTATAGTGGAGCTTTTGGTCCCGTGGTTTTTTACTCTTCACATCGAAGGGTTTTCCACGTAAATCTTGGTGTCTTGTGTGATTGGTTTATTATTGTCTTGTTATATTTGTTTGGTTGAATTACTTGCTGCCTTACTATCATATTGCTTATGGTTGTTTGTTTTCTCTTGGTTCAAATCGAAAAGGGAAAGTATAGACTTGGGTATTCTTCCGCTGTTATCCTGTCAGACATTCTTTG</gDNA_template>
            <first_frame> N  C  W  V  M  G  L  F  F  P  S  Y  V  D  K  *  K  P  N  L  D  Q  P  I  F  A  H  R  P  I  I  M  R  Q  I  *  T  Y  L  G  S  Y  F  Q  T  Y  R  E  S  F  S  A  A  K  R  E  K  K  E  R  N  S  Q  S  K  I  Q  P  *  Q  P  T  S  N  C  D  S  R  F  V  S  C  P  I  E  L  I  F  G  Q  H  I  I  F  I  S  I  F  D  *  E  L  T  E  L  D  L  V  V  C  N  F  S  F  A  V  V  N  S  S  C  E  I  G  D  F  A  P  L  I  L  *  I  W  C  S  L  I  L  L  L  L  V  V  W  H  F  V  L  W  P  I  L  E  N  N  I  V  T  L  G  D  Y  S  G  A  F  G  P  V  V  F  Y  S  S  H  R  R  V  F  H  V  N  L  G  V  L  C  D  W  F  I  I  V  L  L  Y  L  F  G  *  I  T  C  C  L  T  I  I  L  L  M  V  V  C  F  L  L  V  Q  I  E  K  G  K  Y  R  L  G  Y  S  S  A  V  I  L  S  D  I  L   </first_frame>
            <second_frame>  I  V  G  L  W  V  F  F  S  L  P  M  W  I  N  K  S  P  I  W  T  N  P  F  L  P  I  G  P  L  L  *  G  K  Y  K  P  I  *  G  L  I  F  R  H  T  E  R  V  F  Q  Q  P  K  E  R  K  K  R  E  I  R  S  Q  K  S  S  H  N  N  Q  L  Q  I  A  I  P  A  S  F  L  V  R  L  S  *  F  L  D  S  I  L  S  S  S  Q  S  L  I  R  N  *  Q  S  W  I  W  W  S  A  T  S  V  L  L  S  *  T  V  A  A  K  L  V  I  L  L  L  *  F  S  R  F  G  A  V  L  F  C  C  C  S  L  F  G  T  L  F  C  G  Q  F  W  R  T  I  L  *  L  L  V  I  I  V  E  L  L  V  P  W  F  F  T  L  H  I  E  G  F  S  T  *  I  L  V  S  C  V  I  G  L  L  L  S  C  Y  I  C  L  V  E  L  L  A  A  L  L  S  Y  C  L  W  L  F  V  F  S  W  F  K  S  K  R  E  S  I  D  L  G  I  L  P  L  L  S  C  Q  T  F  F  </second_frame>
            <third_frame>   L  L  G  Y  G  S  F  F  P  F  L  C  G  *  I  K  A  Q  F  G  P  T  H  F  C  P  *  A  H  Y  Y  E  A  N  I  N  L  F  R  V  L  F  S  D  I  Q  R  E  F  F  S  S  Q  K  R  E  K  R  E  K  F  A  V  K  N  P  A  I  T  T  N  F  K  L  R  F  P  L  R  F  L  S  D  *  A  D  F  W  T  A  Y  Y  L  H  L  N  L  *  L  G  T  D  R  V  G  F  G  G  L  Q  L  Q  F  C  C  R  E  Q  *  L  R  N  W  *  F  C  S  F  N  S  L  D  L  V  Q  S  Y  F  V  V  A  R  C  L  A  L  C  F  V  A  N  F  G  E  Q  Y  C  N  S  W  *  L  *  W  S  F  W  S  R  G  F  L  L  F  T  S  K  G  F  P  R  K  S  W  C  L  V  *  L  V  Y  Y  C  L  V  I  F  V  W  L  N  Y  L  L  P  Y  Y  H  I  A  Y  G  C  L  F  S  L  G  S  N  R  K  G  K  V  *  T  W  V  F  F  R  C  Y  P  V  R  H  S  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111601" stop="111395"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IWCSLILLLLVVWHFVLWPILENNIVTLGDYSGAFGPVVFYSSHRRVFHVNLGVLCDWFIIVLLYLFG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="117194" PGL_stop="123316"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="119913" e_stop="121824"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="119913" e_stop="121824" e_length="1912"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="119913" stop="121018"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575023" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121015" stop="121824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604002" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGGGATTGCTCGACATCGCACAGTCAGAAATACACCACAGCAGAACGGTGTAGCTGAGCGGATGAATCAAACACTTCTGGAGAGAGCAAGGTGCATGCTCTCTAATGCTGGGCTAAATAGAAGATTCTGGGCAGAAGCGGTTAGTACAGCTTGCTACTTGATTAACCGCGGATCACATACAGGCATACAGTGCAAGACACCTATGGAGATGTGGTCTGGAAAAGCTGCTGATTATTCAAATCTGAAAGCTTTTGGTTGTACAGCTTACTATCACGTCAGTGAAGGTAAGTTAGAACCAAGAGCTAAAAAGGGAGTATTTGTGGGCTACGGAGATGGAGTGAAAGGTTTCAGAATCTGGTCTCCAGCAGAAAAGAGGGTTATTATGAGCAGGAACGTTGTCTTTGATGAAAGTTATCTGCTTAGAATCATTGTGAAGCCTACAACTACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACAGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTTATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAAGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCATTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACTCAGCCGGATGGTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGACTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTAGCGAGGTATGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTGTGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</gDNA_template>
            <first_frame> K  G  L  L  D  I  A  Q  S  E  I  H  H  S  R  T  V  *  L  S  G  *  I  K  H  F  W  R  E  Q  G  A  C  S  L  M  L  G  *  I  E  D  S  G  Q  K  R  L  V  Q  L  A  T  *  L  T  A  D  H  I  Q  A  Y  S  A  R  H  L  W  R  C  G  L  E  K  L  L  I  I  Q  I  *  K  L  L  V  V  Q  L  T  I  T  S  V  K  V  S  *  N  Q  E  L  K  R  E  Y  L  W  A  T  E  M  E  *  K  V  S  E  S  G  L  Q  Q  K  R  G  L  L  *  A  G  T  L  S  L  M  K  V  I  C  L  E  S  L  *  S  L  Q  L  R  Q  K  L  G  V  L  T  N  R  W  S  F  K  S  F  R  T  R  A  I  *  R  N  L  K  R  R  I  K  S  H  R  Q  K  L  I  F  Q  N  L  C  H  Q  I  S  I  R  V  *  L  K  I  G  Q  G  G  L  E  F  G  H  L  R  G  M  V  L  R  T  W  W  V  M  H  C  R  L  L  K  R  *  I  H  L  S  R  L  L  T  K  K  P  F  *  V  L  I  L  K  N  G  L  P  L  W  E  M  R  W  S  P  Y  T  R  I  R  H  G  I  W  S  Y  S  L  R  G  E  R  L  L  L  A  N  G  F  S  R  R  R  K  G  Y  H  Q  Q  K  E  S  S  I  K  P  G  L  L  P  E  V  S  T  K  E  R  E  W  T  T  M  R  S  S  H  Q  W  S  D  I  L  P  S  E  C  Y  *  R  *  L  H  I  R  I  W  S  L  N  N  L  M  *  R  Q  H  F  Y  M  E  S  W  R  K  R  Y  T  *  L  S  R  M  V  S  K  F  Q  G  R  K  I  T  S  A  S  *  R  S  P  Y  M  D  L  S  S  L  Q  G  S  G  I  K  G  L  T  A  I  W  *  S  W  A  I  L  G  A  H  M  T  V  V  S  T  T  I  G  S  M  M  I  H  S  S  I  W  C  F  M  *  M  I  C  *  *  L  Q  R  R  S  M  T  F  R  S  *  R  V  Y  L  V  L  S  L  R  *  R  I  W  E  P  L  G  R  F  *  G  W  R  S  L  E  T  E  R  E  G  N  F  S  C  H  R  E  A  T  F  R  R  S  *  R  G  M  A  C  L  H  L  S  P  L  I  P  P  V  L  P  I  S  I  S  L  P  C  S  L  H  S  Q  K  K  R  R  S  I  C  H  E  S  L  M  P  V  P  *  E  V  *  C  M  L  W  S  V  Q  G  Q  I  *  H  M  Q  S  V  *  *  A  D  S  W  D  N  Q  G  E  N  I  G  R  L  *  R  E  F  S  G  T  L  E  V  H  L  T  L  V  S  F  M  E  V  I  L  S  A  W  L  L  A  I  L  I  Q  T  M  L  E  M  L  T  Q  E  D  R  *  L  A  V  C  L  P  L  E  D  L  S  S  V  G  R  Q  L  </first_frame>
            <second_frame>  R  D  C  S  T  S  H  S  Q  K  Y  T  T  A  E  R  C  S  *  A  D  E  S  N  T  S  G  E  S  K  V  H  A  L  *  C  W  A  K  *  K  I  L  G  R  S  G  *  Y  S  L  L  L  D  *  P  R  I  T  Y  R  H  T  V  Q  D  T  Y  G  D  V  V  W  K  S  C  *  L  F  K  S  E  S  F  W  L  Y  S  L  L  S  R  Q  *  R  *  V  R  T  K  S  *  K  G  S  I  C  G  L  R  R  W  S  E  R  F  Q  N  L  V  S  S  R  K  E  G  Y  Y  E  Q  E  R  C  L  *  *  K  L  S  A  *  N  H  C  E  A  Y  N  Y  V  R  N  W  E  S  *  Q  T  G  G  V  S  S  H  S  E  R  E  R  F  K  G  T  *  R  G  G  S  R  A  T  D  R  N  *  Y  S  R  I  Y  A  I  R  Y  P  S  E  Y  S  S  R  S  A  K  E  G  W  S  S  A  T  Y  E  V  W  F  *  G  H  G  G  L  C  T  A  G  C  *  R  G  R  Y  I  *  A  V  Y  L  Q  R  S  H  F  K  F  L  F  *  K  M  V  C  R  Y  G  R  *  D  G  V  P  T  Q  E  S  D  M  G  S  G  H  T  A  F  G  E  K  D  Y  Y  L  Q  M  G  F  Q  E  E  G  R  D  I  T  S  R  K  S  Q  V  *  S  Q  G  C  C  Q  R  F  Q  P  K  R  G  S  G  L  Q  *  D  L  L  T  S  G  Q  T  Y  F  H  P  S  V  T  S  D  S  C  T  S  E  S  G  A  *  T  T  *  C  E  D  S  I  S  T  W  R  V  G  G  R  D  I  H  D  S  A  G  W  F  P  S  S  R  E  G  K  S  R  L  Q  V  E  E  V  L  I  W  T  *  A  V  S  K  A  V  V  *  K  V  *  Q  L  Y  G  E  V  G  L  Y  S  E  L  I  *  L  L  C  L  L  Q  *  A  Q  *  *  F  I  H  L  S  G  A  L  C  R  *  Y  V  D  S  C  K  E  E  V  *  H  S  E  A  E  G  F  T  *  C  *  V  *  D  E  G  S  G  S  R  S  E  D  F  R  D  G  D  H  *  R  Q  R  E  K  E  T  F  L  V  T  E  K  L  H  S  E  G  L  S  E  V  W  H  V  F  I  *  A  H  *  Y  P  Q  C  C  Q  Y  P  S  H  C  H  V  R  S  T  V  R  R  R  E  G  V  Y  V  T  S  P  L  C  Q  C  R  R  K  F  D  V  C  Y  G  L  Y  K  A  R  F  S  T  C  S  Q  C  S  E  Q  I  H  G  T  T  R  E  R  T  L  A  G  C  E  E  N  F  P  V  P  *  R  Y  I  *  R  W  S  H  L  W  R  *  Y  S  V  L  G  Y  W  L  F  *  F  R  L  C  W  R  C  *  H  K  K  I  D  D  W  L  C  V  Y  P  W  R  I  C  R  Q  L  E  G  N  F </second_frame>
            <third_frame>   G  I  A  R  H  R  T  V  R  N  T  P  Q  Q  N  G  V  A  E  R  M  N  Q  T  L  L  E  R  A  R  C  M  L  S  N  A  G  L  N  R  R  F  W  A  E  A  V  S  T  A  C  Y  L  I  N  R  G  S  H  T  G  I  Q  C  K  T  P  M  E  M  W  S  G  K  A  A  D  Y  S  N  L  K  A  F  G  C  T  A  Y  Y  H  V  S  E  G  K  L  E  P  R  A  K  K  G  V  F  V  G  Y  G  D  G  V  K  G  F  R  I  W  S  P  A  E  K  R  V  I  M  S  R  N  V  V  F  D  E  S  Y  L  L  R  I  I  V  K  P  T  T  T  S  E  T  G  S  L  D  K  Q  V  E  F  Q  V  I  Q  N  E  S  D  L  K  E  P  E  E  E  D  Q  E  P  Q  T  E  T  D  I  P  E  S  M  P  S  D  I  H  Q  S  I  A  Q  D  R  P  R  R  V  G  V  R  P  P  T  R  Y  G  F  E  D  M  V  G  Y  A  L  Q  V  A  E  E  V  D  T  S  E  P  S  T  Y  K  E  A  I  L  S  S  Y  S  E  K  W  F  A  A  M  G  D  E  M  E  S  L  H  K  N  Q  T  W  D  L  V  I  Q  P  S  G  R  K  I  I  T  C  K  W  V  F  K  K  K  E  G  I  S  P  A  E  R  V  K  Y  K  A  R  V  V  A  R  G  F  N  Q  R  E  G  V  D  Y  N  E  I  F  S  P  V  V  R  H  T  S  I  R  V  L  L  A  I  V  A  H  Q  N  L  E  L  E  Q  L  D  V  K  T  A  F  L  H  G  E  L  E  E  E  I  Y  M  T  Q  P  D  G  F  Q  V  P  G  K  E  N  H  V  C  K  L  K  K  S  L  Y  G  L  K  Q  S  P  R  Q  W  Y  K  R  F  D  S  Y  M  V  K  L  G  Y  T  R  S  S  Y  D  C  C  V  Y  Y  N  R  L  N  D  D  S  F  I  Y  L  V  L  Y  V  D  D  M  L  I  A  A  K  K  K  Y  D  I  Q  K  L  K  G  L  L  S  A  E  F  E  M  K  D  L  G  A  A  R  K  I  L  G  M  E  I  I  R  D  R  E  R  R  K  L  F  L  S  Q  R  S  Y  I  Q  K  V  L  A  R  Y  G  M  S  S  S  K  P  I  D  T  P  S  A  A  N  I  H  L  T  A  M  F  A  P  Q  S  E  E  E  K  E  Y  M  S  R  V  P  Y  A  S  A  V  G  S  L  M  Y  A  M  V  C  T  R  P  D  L  A  H  A  V  S  V  V  S  R  F  M  G  Q  P  G  R  E  H  W  Q  A  V  K  R  I  F  R  Y  L  R  G  T  S  D  V  G  L  I  Y  G  G  D  T  Q  C  L  V  T  G  Y  S  D  S  D  Y  A  G  D  V  D  T  R  R  S  M  T  G  C  V  F  T  L  G  G  S  V  V  S  W  K  A  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="119915" stop="121822"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1908</number_coding_nucleotides>
                  <number_encoded_amino_acids>636</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLNRRFWAEAVSTACYLINRGSHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYGDGVKGFRIWSPAEKRVIMSRNVVFDESYLLRIIVKPTTTSETGSLDKQVEFQVIQNESDLKEPEEEDQEPQTETDIPESMPSDIHQSIAQDRPRRVGVRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSSYSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAERVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARYGMSSSKPIDTPSAANIHLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDTRRSMTGCVFTLGGSVVSWKAT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="119572" e_stop="119870"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="119572" e_stop="119870" e_length="299"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="119572" stop="119870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603118" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTAGAGTTTTGTGAACATTGTGTTTTTGGAAAACTACATCGCAACAAGTTTCCAAAGGCCATTCATAGAACAAAAGGCACACTTGATTATATCCATTCTGATTGCTGGGGTCCATGCCGTGTTGAGTCTTTGGGAGGCTGCAGATTTTTTGTGTCCATTATTGATGACTACTCAAGGATGACTTGGGTGTACATGATGAAGCATAAAAGTGAAGCCTTCCAGAAGTTCAAGGAGTGGAAAATTTTGATGGAAAATCAAACAGGGAAGAAGATCAAGAGGTTGCGAACTGATAATGGGC</gDNA_template>
            <first_frame> P  R  V  L  *  T  L  C  F  W  K  T  T  S  Q  Q  V  S  K  G  H  S  *  N  K  R  H  T  *  L  Y  P  F  *  L  L  G  S  M  P  C  *  V  F  G  R  L  Q  I  F  C  V  H  Y  *  *  L  L  K  D  D  L  G  V  H  D  E  A  *  K  *  S  L  P  E  V  Q  G  V  E  N  F  D  G  K  S  N  R  E  E  D  Q  E  V  A  N  *  *  W   </first_frame>
            <second_frame>  L  E  F  C  E  H  C  V  F  G  K  L  H  R  N  K  F  P  K  A  I  H  R  T  K  G  T  L  D  Y  I  H  S  D  C  W  G  P  C  R  V  E  S  L  G  G  C  R  F  F  V  S  I  I  D  D  Y  S  R  M  T  W  V  Y  M  M  K  H  K  S  E  A  F  Q  K  F  K  E  W  K  I  L  M  E  N  Q  T  G  K  K  I  K  R  L  R  T  D  N  G  </second_frame>
            <third_frame>   *  S  F  V  N  I  V  F  L  E  N  Y  I  A  T  S  F  Q  R  P  F  I  E  Q  K  A  H  L  I  I  S  I  L  I  A  G  V  H  A  V  L  S  L  W  E  A  A  D  F  L  C  P  L  L  M  T  T  Q  G  *  L  G  C  T  *  *  S  I  K  V  K  P  S  R  S  S  R  S  G  K  F  *  W  K  I  K  Q  G  R  R  S  R  G  C  E  L  I  M  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="119573" stop="119869"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>297</number_coding_nucleotides>
                  <number_encoded_amino_acids>99</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LEFCEHCVFGKLHRNKFPKAIHRTKGTLDYIHSDCWGPCRVESLGGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="117194" e_stop="117328"/>
            <exon e_start="117573" e_stop="117664"/>
            <exon e_start="122584" e_stop="122701"/>
            <exon e_start="122859" e_stop="122875"/>
            <exon e_start="122954" e_stop="123016"/>
            <exon e_start="123168" e_stop="123316"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.971" acc_prob="1.000" e_score="0.948"/>
          <exon-intron don_prob="0.962" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.861" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.822" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.980" e_score="1.000"/>
          <exon-only e_score="0.946"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.948">
            <gDNA_exon_boundary e_start="117194" e_stop="117328" e_length="135"/>
          </exon>
          <intron i_serial="1" don_prob="0.971" acc_prob="1.000">
            <gDNA_intron_boundary i_start="117329" i_stop="117572" i_length="244"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="117573" e_stop="117664" e_length="92"/>
          </exon>
          <intron i_serial="2" don_prob="0.962" acc_prob="0.990">
            <gDNA_intron_boundary i_start="117665" i_stop="122583" i_length="4919"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="122584" e_stop="122701" e_length="118"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.861">
            <gDNA_intron_boundary i_start="122702" i_stop="122858" i_length="157"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="122859" e_stop="122875" e_length="17"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.822">
            <gDNA_intron_boundary i_start="122876" i_stop="122953" i_length="78"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="122954" e_stop="123016" e_length="63"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.980">
            <gDNA_intron_boundary i_start="123017" i_stop="123167" i_length="151"/>
          </intron>
          <exon e_serial="6" e_score="0.946">
            <gDNA_exon_boundary e_start="123168" e_stop="123316" e_length="149"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117194" stop="117328"/>
              <exon start="117573" stop="117664"/>
              <exon start="122584" stop="122701"/>
              <exon start="122859" stop="122875"/>
              <exon start="122954" stop="123016"/>
              <exon start="123168" stop="123316"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584346" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGCAATTGTATCTTCACAGCTCTCCTTATTCCCTTCAACACTTCAAAGAGAAAACAGAAATCATCTATTCAAGTCATCGAAACAGAGAACTTGTCAATCTACTCGTTTCCACTGTCACAAGATGTATGTCCCTG : GATTTGGGACATCACCAGAATCCACAGCAGCCCAACACTTACACCACTTTTTCAATTTTATTGCTGTTAAAATTGTTGCTGCACAGCTTCAG : AGCTACAATCCTGAAGCATACGAGGAGCTGAGGGAGTTTCTGGATAAGAATTCATTGAGTGATGGGGATAAGTTCTGCGCGGATTTGATGAGGGAATCCCCGAGACATAAAGATCTAG : CTATGCGCATTTTAGAG : GTTCGATCAGCATACTGTAAGGACGACTTTGAGTGGGATAACTTGAAGCGCCTAGCATCAAAG : ATGGTGGATGATTCTAATAAAAAGCTAATGACGGATTATATCGTGGATACTAGCTGCATTGCAGATGGAAAGCAGATATGCAACTAATCAAACTCCTTAAAATTTTAATCCACTGTGTATTTAGGAAAACTACAGAATATACATGTTTT</gDNA_template>
            <first_frame> Q  Q  L  Y  L  H  S  S  P  Y  S  L  Q  H  F  K  E  K  T  E  I  I  Y  S  S  H  R  N  R  E  L  V  N  L  L  V  S  T  V  T  R  C  M  S  L  :  D  L  G  H  H  Q  N  P  Q  Q  P  N  T  Y  T  T  F  S  I  L  L  L  L  K  L  L  L  H  S  F  R :   A  T  I  L  K  H  T  R  S  *  G  S  F  W  I  R  I  H  *  V  M  G  I  S  S  A  R  I  *  *  G  N  P  R  D  I  K  I  *  :  L  C  A  F  *  R :   F  D  Q  H  T  V  R  T  T  L  S  G  I  T  *  S  A  *  H  Q  R :   W  W  M  I  L  I  K  S  *  *  R  I  I  S  W  I  L  A  A  L  Q  M  E  S  R  Y  A  T  N  Q  T  P  *  N  F  N  P  L  C  I  *  E  N  Y  R  I  Y  M  F  </first_frame>
            <second_frame>  S  N  C  I  F  T  A  L  L  I  P  F  N  T  S  K  R  K  Q  K  S  S  I  Q  V  I  E  T  E  N  L  S  I  Y  S  F  P  L  S  Q  D  V  C  P  W :   I  W  D  I  T  R  I  H  S  S  P  T  L  T  P  L  F  Q  F  Y  C  C  *  N  C  C  C  T  A  S   : E  L  Q  S  *  S  I  R  G  A  E  G  V  S  G  *  E  F  I  E  *  W  G  *  V  L  R  G  F  D  E  G  I  P  E  T  *  R  S  S :   Y  A  H  F  R   : G  S  I  S  I  L  *  G  R  L  *  V  G  *  L  E  A  P  S  I  K   : D  G  G  *  F  *  *  K  A  N  D  G  L  Y  R  G  Y  *  L  H  C  R  W  K  A  D  M  Q  L  I  K  L  L  K  I  L  I  H  C  V  F  R  K  T  T  E  Y  T  C  F </second_frame>
            <third_frame>   A  I  V  S  S  Q  L  S  L  F  P  S  T  L  Q  R  E  N  R  N  H  L  F  K  S  S  K  Q  R  T  C  Q  S  T  R  F  H  C  H  K  M  Y  V  P   : G  F  G  T  S  P  E  S  T  A  A  Q  H  L  H  H  F  F  N  F  I  A  V  K  I  V  A  A  Q  L  Q  :  S  Y  N  P  E  A  Y  E  E  L  R  E  F  L  D  K  N  S  L  S  D  G  D  K  F  C  A  D  L  M  R  E  S  P  R  H  K  D  L   : A  M  R  I  L  E  :  V  R  S  A  Y  C  K  D  D  F  E  W  D  N  L  K  R  L  A  S  K  :  M  V  D  D  S  N  K  K  L  M  T  D  Y  I  V  D  T  S  C  I  A  D  G  K  Q  I  C  N  *  S  N  S  L  K  F  *  S  T  V  Y  L  G  K  L  Q  N  I  H  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="14" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="117196" stop="117328"/>
                    <exon start="117573" stop="117664"/>
                    <exon start="122584" stop="122701"/>
                    <exon start="122859" stop="122875"/>
                    <exon start="122954" stop="123016"/>
                    <exon start="123168" stop="123254"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>507</number_coding_nucleotides>
                  <number_encoded_amino_acids>169</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AIVSSQLSLFPSTLQRENRNHLFKSSKQRTCQSTRFHCHKMYVPGFGTSPESTAAQHLHHFFNFIAVKIVAAQLQSYNPEAYEELREFLDKNSLSDGDKFCADLMRESPRHKDLAMRILEVRSAYCKDDFEWDNLKRLASKMVDDSNKKLMTDYIVDTSCIADGKQICN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="139057" PGL_stop="145215"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="139057" e_stop="139419"/>
            <exon e_start="139998" e_stop="140130"/>
            <exon e_start="140220" e_stop="140291"/>
            <exon e_start="140381" e_stop="140446"/>
            <exon e_start="140538" e_stop="140609"/>
            <exon e_start="140722" e_stop="140793"/>
            <exon e_start="141400" e_stop="141471"/>
            <exon e_start="141550" e_stop="141615"/>
            <exon e_start="141711" e_stop="141776"/>
            <exon e_start="141862" e_stop="142184"/>
            <exon e_start="142337" e_stop="142593"/>
            <exon e_start="143993" e_stop="144264"/>
            <exon e_start="144347" e_stop="144482"/>
            <exon e_start="144891" e_stop="145033"/>
            <exon e_start="145118" e_stop="145215"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.916" acc_prob="0.912" e_score="0.992"/>
          <exon-intron don_prob="0.943" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.879" acc_prob="0.800" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.927" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.930" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.809" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.559" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="139057" e_stop="139419" e_length="363"/>
          </exon>
          <intron i_serial="1" don_prob="0.916" acc_prob="0.912">
            <gDNA_intron_boundary i_start="139420" i_stop="139997" i_length="578"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="139998" e_stop="140130" e_length="133"/>
          </exon>
          <intron i_serial="2" don_prob="0.943" acc_prob="0.958">
            <gDNA_intron_boundary i_start="140131" i_stop="140219" i_length="89"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="140220" e_stop="140291" e_length="72"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.991">
            <gDNA_intron_boundary i_start="140292" i_stop="140380" i_length="89"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="140381" e_stop="140446" e_length="66"/>
          </exon>
          <intron i_serial="4" don_prob="0.959" acc_prob="0.999">
            <gDNA_intron_boundary i_start="140447" i_stop="140537" i_length="91"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="140538" e_stop="140609" e_length="72"/>
          </exon>
          <intron i_serial="5" don_prob="0.879" acc_prob="0.800">
            <gDNA_intron_boundary i_start="140610" i_stop="140721" i_length="112"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="140722" e_stop="140793" e_length="72"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.991">
            <gDNA_intron_boundary i_start="140794" i_stop="141399" i_length="606"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="141400" e_stop="141471" e_length="72"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.927">
            <gDNA_intron_boundary i_start="141472" i_stop="141549" i_length="78"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="141550" e_stop="141615" e_length="66"/>
          </exon>
          <intron i_serial="8" don_prob="0.991" acc_prob="0.986">
            <gDNA_intron_boundary i_start="141616" i_stop="141710" i_length="95"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="141711" e_stop="141776" e_length="66"/>
          </exon>
          <intron i_serial="9" don_prob="0.998" acc_prob="0.930">
            <gDNA_intron_boundary i_start="141777" i_stop="141861" i_length="85"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="141862" e_stop="142184" e_length="323"/>
          </exon>
          <intron i_serial="10" don_prob="0.992" acc_prob="0.985">
            <gDNA_intron_boundary i_start="142185" i_stop="142336" i_length="152"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="142337" e_stop="142593" e_length="257"/>
          </exon>
          <intron i_serial="11" don_prob="0.996" acc_prob="0.809">
            <gDNA_intron_boundary i_start="142594" i_stop="143992" i_length="1399"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="143993" e_stop="144264" e_length="272"/>
          </exon>
          <intron i_serial="12" don_prob="0.990" acc_prob="0.991">
            <gDNA_intron_boundary i_start="144265" i_stop="144346" i_length="82"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="144347" e_stop="144482" e_length="136"/>
          </exon>
          <intron i_serial="13" don_prob="0.559" acc_prob="0.986">
            <gDNA_intron_boundary i_start="144483" i_stop="144890" i_length="408"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="144891" e_stop="145033" e_length="143"/>
          </exon>
          <intron i_serial="14" don_prob="0.985" acc_prob="0.992">
            <gDNA_intron_boundary i_start="145034" i_stop="145117" i_length="84"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="145118" e_stop="145215" e_length="98"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="139057" stop="139419"/>
              <exon start="139998" stop="140130"/>
              <exon start="140220" stop="140291"/>
              <exon start="140381" stop="140446"/>
              <exon start="140538" stop="140609"/>
              <exon start="140722" stop="140793"/>
              <exon start="141400" stop="141471"/>
              <exon start="141550" stop="141615"/>
              <exon start="141711" stop="141776"/>
              <exon start="141862" stop="142184"/>
              <exon start="142337" stop="142593"/>
              <exon start="143993" stop="144264"/>
              <exon start="144347" stop="144482"/>
              <exon start="144891" stop="145033"/>
              <exon start="145118" stop="145215"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584655" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTTTCGCCGACACCTATATATACACACTGCCAGTGGAGTCTTGTATAAATTTCTCTCTCTTCATTAAAACGAAAGCTTGGAATCGGAGAGTTTCTAAACGATGGTGACACCTACCACTACTGACGATGTTACCTTCTTGTCATTTCCCTGTCTTTCTTTCGCCATGCTTCTTCTTCTTCCTCTTACCTGTGTTTCTGGACAACCCCTTTAATTCTTGACTAACAAGAACGAACAAAACAGAAAATGAATAGAAATAGCTGTAAGCAAGACACCCTTTTCCCCCTTTTGCCACTAGTGGTGATTGTGGCAGTGGGTTTTTACTCATCTTTTGTTGCGGAAGGAAACACTGATCCGAATGATT : TGCAAGCTCTTCAGGTCTTGTATGCTTCACTGAATAATCCTTCACAGCTCTCTAATTGGAAGTCGAATGGTGGCGATCCCTGTGGTGAGTCTTGGAAAGGAATCACTTGTCAGGCCTCTTCTGTTGTTTCAAT : TCAAATTCCTGATTTGGGACTCAATGGAACGTTGGGATACATGCTAAATGGTCTTACCTCGTTAAAGAACTT : GGATTTGAGCGGCAACAACATTCATGATTCTATTCCATATCAGCTTCCACCCAATCTCACTAGCCT : GAATCTTGCAAACAACAATATAAGTGGCAACATTCCGTATTCCTTTGCTGGCATGGTTACACTTAGCTATCT : GAATCTTAGCCATAACTCACTCTCTCAAACAATTGGAGAATTGTTCAGCAACCACTCTGATCTGGGAACCTT : GGATCTGTCCTCAAATAATTTTTCTGGAGATCTCCCCTCTTCATTCAGTTCGTTGACAAATCTTTCCACACT : TCATCTGGAAAACAATCAGCTAAGTGGCCCTCTCAATATCCTGATTGATCTACCTTTGACTAATTT : AAATGTTGCAAAGAATCATTTTAATGGATGGATCCCAAATGAGCTCCTATCTATCCCCAACTTCAT : ATACGATGGGAATTCCTTTGCAAATGGTCCAGCTCCTCCCCCACCACCATACACTGCACCTCCTCCTGGAAGATCTCGCCACAACCGTAGCCATTCTCCTCCTAGTTCACGTACAAGACCAGGTTCTGATGGCCCCCCATCTCCAGAAAATGGTGATAAAAAGAAGGGATTGACAACTGGAGCTATCGTTGGCATAGCTCTTGGATCTTCTCTTGCAATTCTTTTTGCTCTGGTAGCACTTGTATTTTGCTTCCGGAGGGGCAAGGGCAAGGAAATTGCTACAAGACCCTCTACAGGAAGTCTTCCAGTTGGCACAGATAAAG : TGAATATGGAGGTACAAGAGCAAAGGGCGAAGCCTGTGGTTGCTGTTGCTGACTTGAAGCCCCCACCTACCGAAAAGGTGACTGTTGAAATGATACAAGGAAAGAATGGATCTGTCAGGAGAGTGAAGTCTCCAATAACTGCATCTGCTTATACTGTTGCTGCATTGCAAACAGCAACAAACAGCTTCAGTCAAGAAAATCTCATTGGTGAAGGATCTCTTGGGCGTGTTTATAGGGCAGAGTTTCCTAATGGGAAG : ATAATGGTCATAAAAAAGATCGACAGTGCAGCACTGTCGCTGCAGGAGGAAGATAACTTTCTCGAAGCTGTCTCAAATATGTCAAGGCTGAGACACCCAAACATTGTTCAATTGATAGGATATTGTGCTGAGCATGGACAGCGTCTTCTGGTTTATGACCATGTTGCAAATGGTAGCTTGCATGATATGCTGCACTTTGCTGATGAGAGGAGCGAATTGCTTACTTGGAATGCCCGGGTTAGAGTAGCACTTGGCACTGCTCGAGCTTTAGA : GTACTTGCATGAAGTCTGTCTACCTTCTGTTGTACATAGAAACTTCAAATCCGCAAATATTTTACTAGATGAAGAGCTCAATCCCCATTTATCAGATTGTGGGTTAGCAGCTTTGACTCCCAACACAGAACGCCAG : GTGTCATCTACACAGATGATTGGTTCATTCGGCTATAGCGCTCCTGAATTTGCTTTATCTGGAATATACACTGTAAAAAGTGACGTATATAGTTTTGGTGTGGTAATGTTGGAGTTGTTAACAGGAAGGAAGCCACTTGATAG : TTCAAGGGTGAGATCAGAGCAGTCCCTTGTGAGATGGGCTACGCCTCAACTCCATGATATAGATGCCTTGTCAAAAATGGTTGATCCTGCACTAAATG</gDNA_template>
            <first_frame> I  F  R  R  H  L  Y  I  H  T  A  S  G  V  L  Y  K  F  L  S  L  H  *  N  E  S  L  E  S  E  S  F  *  T  M  V  T  P  T  T  T  D  D  V  T  F  L  S  F  P  C  L  S  F  A  M  L  L  L  L  P  L  T  C  V  S  G  Q  P  L  *  F  L  T  N  K  N  E  Q  N  R  K  *  I  E  I  A  V  S  K  T  P  F  S  P  F  C  H  *  W  *  L  W  Q  W  V  F  T  H  L  L  L  R  K  E  T  L  I  R  M  I  :  C  K  L  F  R  S  C  M  L  H  *  I  I  L  H  S  S  L  I  G  S  R  M  V  A  I  P  V  V  S  L  G  K  E  S  L  V  R  P  L  L  L  F  Q   : F  K  F  L  I  W  D  S  M  E  R  W  D  T  C  *  M  V  L  P  R  *  R  T   : W  I  *  A  A  T  T  F  M  I  L  F  H  I  S  F  H  P  I  S  L  A   : *  I  L  Q  T  T  I  *  V  A  T  F  R  I  P  L  L  A  W  L  H  L  A  I   : *  I  L  A  I  T  H  S  L  K  Q  L  E  N  C  S  A  T  T  L  I  W  E  P   : W  I  C  P  Q  I  I  F  L  E  I  S  P  L  H  S  V  R  *  Q  I  F  P  H   : F  I  W  K  T  I  S  *  V  A  L  S  I  S  *  L  I  Y  L  *  L  I   : *  M  L  Q  R  I  I  L  M  D  G  S  Q  M  S  S  Y  L  S  P  T  S   : Y  T  M  G  I  P  L  Q  M  V  Q  L  L  P  H  H  H  T  L  H  L  L  L  E  D  L  A  T  T  V  A  I  L  L  L  V  H  V  Q  D  Q  V  L  M  A  P  H  L  Q  K  M  V  I  K  R  R  D  *  Q  L  E  L  S  L  A  *  L  L  D  L  L  L  Q  F  F  L  L  W  *  H  L  Y  F  A  S  G  G  A  R  A  R  K  L  L  Q  D  P  L  Q  E  V  F  Q  L  A  Q  I  K  :  *  I  W  R  Y  K  S  K  G  R  S  L  W  L  L  L  L  T  *  S  P  H  L  P  K  R  *  L  L  K  *  Y  K  E  R  M  D  L  S  G  E  *  S  L  Q  *  L  H  L  L  I  L  L  L  H  C  K  Q  Q  Q  T  A  S  V  K  K  I  S  L  V  K  D  L  L  G  V  F  I  G  Q  S  F  L  M  G  R :   *  W  S  *  K  R  S  T  V  Q  H  C  R  C  R  R  K  I  T  F  S  K  L  S  Q  I  C  Q  G  *  D  T  Q  T  L  F  N  *  *  D  I  V  L  S  M  D  S  V  F  W  F  M  T  M  L  Q  M  V  A  C  M  I  C  C  T  L  L  M  R  G  A  N  C  L  L  G  M  P  G  L  E  *  H  L  A  L  L  E  L  *   : S  T  C  M  K  S  V  Y  L  L  L  Y  I  E  T  S  N  P  Q  I  F  Y  *  M  K  S  S  I  P  I  Y  Q  I  V  G  *  Q  L  *  L  P  T  Q  N  A  R :   C  H  L  H  R  *  L  V  H  S  A  I  A  L  L  N  L  L  Y  L  E  Y  T  L  *  K  V  T  Y  I  V  L  V  W  *  C  W  S  C  *  Q  E  G  S  H  L  I   : V  Q  G  *  D  Q  S  S  P  L  *  D  G  L  R  L  N  S  M  I  *  M  P  C  Q  K  W  L  I  L  H  *  M </first_frame>
            <second_frame>  F  F  A  D  T  Y  I  Y  T  L  P  V  E  S  C  I  N  F  S  L  F  I  K  T  K  A  W  N  R  R  V  S  K  R  W  *  H  L  P  L  L  T  M  L  P  S  C  H  F  P  V  F  L  S  P  C  F  F  F  F  L  L  P  V  F  L  D  N  P  F  N  S  *  L  T  R  T  N  K  T  E  N  E  *  K  *  L  *  A  R  H  P  F  P  P  F  A  T  S  G  D  C  G  S  G  F  L  L  I  F  C  C  G  R  K  H  *  S  E  *  F :   A  S  S  S  G  L  V  C  F  T  E  *  S  F  T  A  L  *  L  E  V  E  W  W  R  S  L  W  *  V  L  E  R  N  H  L  S  G  L  F  C  C  F  N  :  S  N  S  *  F  G  T  Q  W  N  V  G  I  H  A  K  W  S  Y  L  V  K  E  L  :  G  F  E  R  Q  Q  H  S  *  F  Y  S  I  S  A  S  T  Q  S  H  *  P  :  E  S  C  K  Q  Q  Y  K  W  Q  H  S  V  F  L  C  W  H  G  Y  T  *  L  S  :  E  S  *  P  *  L  T  L  S  N  N  W  R  I  V  Q  Q  P  L  *  S  G  N  L  :  G  S  V  L  K  *  F  F  W  R  S  P  L  F  I  Q  F  V  D  K  S  F  H  T  :  S  S  G  K  Q  S  A  K  W  P  S  Q  Y  P  D  *  S  T  F  D  *  F  :  K  C  C  K  E  S  F  *  W  M  D  P  K  *  A  P  I  Y  P  Q  L  H  :  I  R  W  E  F  L  C  K  W  S  S  S  S  P  T  T  I  H  C  T  S  S  W  K  I  S  P  Q  P  *  P  F  S  S  *  F  T  Y  K  T  R  F  *  W  P  P  I  S  R  K  W  *  *  K  E  G  I  D  N  W  S  Y  R  W  H  S  S  W  I  F  S  C  N  S  F  C  S  G  S  T  C  I  L  L  P  E  G  Q  G  Q  G  N  C  Y  K  T  L  Y  R  K  S  S  S  W  H  R  *  S :   E  Y  G  G  T  R  A  K  G  E  A  C  G  C  C  C  *  L  E  A  P  T  Y  R  K  G  D  C  *  N  D  T  R  K  E  W  I  C  Q  E  S  E  V  S  N  N  C  I  C  L  Y  C  C  C  I  A  N  S  N  K  Q  L  Q  S  R  K  S  H  W  *  R  I  S  W  A  C  L  *  G  R  V  S  *  W  E   : D  N  G  H  K  K  D  R  Q  C  S  T  V  A  A  G  G  R  *  L  S  R  S  C  L  K  Y  V  K  A  E  T  P  K  H  C  S  I  D  R  I  L  C  *  A  W  T  A  S  S  G  L  *  P  C  C  K  W  *  L  A  *  Y  A  A  L  C  *  *  E  E  R  I  A  Y  L  E  C  P  G  *  S  S  T  W  H  C  S  S  F  R  :  V  L  A  *  S  L  S  T  F  C  C  T  *  K  L  Q  I  R  K  Y  F  T  R  *  R  A  Q  S  P  F  I  R  L  W  V  S  S  F  D  S  Q  H  R  T  P   : G  V  I  Y  T  D  D  W  F  I  R  L  *  R  S  *  I  C  F  I  W  N  I  H  C  K  K  *  R  I  *  F  W  C  G  N  V  G  V  V  N  R  K  E  A  T  *  *  :  F  K  G  E  I  R  A  V  P  C  E  M  G  Y  A  S  T  P  *  Y  R  C  L  V  K  N  G  *  S  C  T  K   </second_frame>
            <third_frame>   F  S  P  T  P  I  Y  T  H  C  Q  W  S  L  V  *  I  S  L  S  S  L  K  R  K  L  G  I  G  E  F  L  N  D  G  D  T  Y  H  Y  *  R  C  Y  L  L  V  I  S  L  S  F  F  R  H  A  S  S  S  S  S  Y  L  C  F  W  T  T  P  L  I  L  D  *  Q  E  R  T  K  Q  K  M  N  R  N  S  C  K  Q  D  T  L  F  P  L  L  P  L  V  V  I  V  A  V  G  F  Y  S  S  F  V  A  E  G  N  T  D  P  N  D   : L  Q  A  L  Q  V  L  Y  A  S  L  N  N  P  S  Q  L  S  N  W  K  S  N  G  G  D  P  C  G  E  S  W  K  G  I  T  C  Q  A  S  S  V  V  S  I :   Q  I  P  D  L  G  L  N  G  T  L  G  Y  M  L  N  G  L  T  S  L  K  N  L :   D  L  S  G  N  N  I  H  D  S  I  P  Y  Q  L  P  P  N  L  T  S  L :   N  L  A  N  N  N  I  S  G  N  I  P  Y  S  F  A  G  M  V  T  L  S  Y  L :   N  L  S  H  N  S  L  S  Q  T  I  G  E  L  F  S  N  H  S  D  L  G  T  L :   D  L  S  S  N  N  F  S  G  D  L  P  S  S  F  S  S  L  T  N  L  S  T  L :   H  L  E  N  N  Q  L  S  G  P  L  N  I  L  I  D  L  P  L  T  N  L :   N  V  A  K  N  H  F  N  G  W  I  P  N  E  L  L  S  I  P  N  F  I :   Y  D  G  N  S  F  A  N  G  P  A  P  P  P  P  P  Y  T  A  P  P  P  G  R  S  R  H  N  R  S  H  S  P  P  S  S  R  T  R  P  G  S  D  G  P  P  S  P  E  N  G  D  K  K  K  G  L  T  T  G  A  I  V  G  I  A  L  G  S  S  L  A  I  L  F  A  L  V  A  L  V  F  C  F  R  R  G  K  G  K  E  I  A  T  R  P  S  T  G  S  L  P  V  G  T  D  K   : V  N  M  E  V  Q  E  Q  R  A  K  P  V  V  A  V  A  D  L  K  P  P  P  T  E  K  V  T  V  E  M  I  Q  G  K  N  G  S  V  R  R  V  K  S  P  I  T  A  S  A  Y  T  V  A  A  L  Q  T  A  T  N  S  F  S  Q  E  N  L  I  G  E  G  S  L  G  R  V  Y  R  A  E  F  P  N  G  K  :  I  M  V  I  K  K  I  D  S  A  A  L  S  L  Q  E  E  D  N  F  L  E  A  V  S  N  M  S  R  L  R  H  P  N  I  V  Q  L  I  G  Y  C  A  E  H  G  Q  R  L  L  V  Y  D  H  V  A  N  G  S  L  H  D  M  L  H  F  A  D  E  R  S  E  L  L  T  W  N  A  R  V  R  V  A  L  G  T  A  R  A  L  E :   Y  L  H  E  V  C  L  P  S  V  V  H  R  N  F  K  S  A  N  I  L  L  D  E  E  L  N  P  H  L  S  D  C  G  L  A  A  L  T  P  N  T  E  R  Q  :  V  S  S  T  Q  M  I  G  S  F  G  Y  S  A  P  E  F  A  L  S  G  I  Y  T  V  K  S  D  V  Y  S  F  G  V  V  M  L  E  L  L  T  G  R  K  P  L  D  S :   S  R  V  R  S  E  Q  S  L  V  R  W  A  T  P  Q  L  H  D  I  D  A  L  S  K  M  V  D  P  A  L  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="139281" stop="139419"/>
                    <exon start="139998" stop="140130"/>
                    <exon start="140220" stop="140291"/>
                    <exon start="140381" stop="140446"/>
                    <exon start="140538" stop="140609"/>
                    <exon start="140722" stop="140793"/>
                    <exon start="141400" stop="141471"/>
                    <exon start="141550" stop="141615"/>
                    <exon start="141711" stop="141776"/>
                    <exon start="141862" stop="142184"/>
                    <exon start="142337" stop="142593"/>
                    <exon start="143993" stop="144264"/>
                    <exon start="144347" stop="144482"/>
                    <exon start="144891" stop="145033"/>
                    <exon start="145118" stop="145214"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1986</number_coding_nucleotides>
                  <number_encoded_amino_acids>662</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QERTKQKMNRNSCKQDTLFPLLPLVVIVAVGFYSSFVAEGNTDPNDLQALQVLYASLNNPSQLSNWKSNGGDPCGESWKGITCQASSVVSIQIPDLGLNGTLGYMLNGLTSLKNLDLSGNNIHDSIPYQLPPNLTSLNLANNNISGNIPYSFAGMVTLSYLNLSHNSLSQTIGELFSNHSDLGTLDLSSNNFSGDLPSSFSSLTNLSTLHLENNQLSGPLNILIDLPLTNLNVAKNHFNGWIPNELLSIPNFIYDGNSFANGPAPPPPPYTAPPPGRSRHNRSHSPPSSRTRPGSDGPPSPENGDKKKGLTTGAIVGIALGSSLAILFALVALVFCFRRGKGKEIATRPSTGSLPVGTDKVNMEVQEQRAKPVVAVADLKPPPTEKVTVEMIQGKNGSVRRVKSPITASAYTVAALQTATNSFSQENLIGEGSLGRVYRAEFPNGKIMVIKKIDSAALSLQEEDNFLEAVSNMSRLRHPNIVQLIGYCAEHGQRLLVYDHVANGSLHDMLHFADERSELLTWNARVRVALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSSTQMIGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALSKMVDPALN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="145903" PGL_stop="146176"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="145903" e_stop="146176"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="145903" e_stop="146176" e_length="274"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="145903" stop="146176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599274" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCCCCAATGTCTGAAGTTGTGCAAGCACTGGTTCGGTTAATGCAAAGAGCAAGTGTGGTCAAAAGGCGATCCAGTGATGAATCAGCTTTCACATACAAGACTCCGGATCATGAGACGGTTGACATGCCATAGATAAAACATACACGACGAAGCAGCCTTTGCAATTTTGTAAGTAACTTCTGTGAAGGTCAAGAGTAACTGTGGCAGATGAAACTGGGAGGTGTCAATACCAGGGACATTAAATATGTAATTATTTTTCACATCTTCGTCGTTT</gDNA_template>
            <first_frame> P  P  M  S  E  V  V  Q  A  L  V  R  L  M  Q  R  A  S  V  V  K  R  R  S  S  D  E  S  A  F  T  Y  K  T  P  D  H  E  T  V  D  M  P  *  I  K  H  T  R  R  S  S  L  C  N  F  V  S  N  F  C  E  G  Q  E  *  L  W  Q  M  K  L  G  G  V  N  T  R  D  I  K  Y  V  I  I  F  H  I  F  V  V  </first_frame>
            <second_frame>  P  Q  C  L  K  L  C  K  H  W  F  G  *  C  K  E  Q  V  W  S  K  G  D  P  V  M  N  Q  L  S  H  T  R  L  R  I  M  R  R  L  T  C  H  R  *  N  I  H  D  E  A  A  F  A  I  L  *  V  T  S  V  K  V  K  S  N  C  G  R  *  N  W  E  V  S  I  P  G  T  L  N  M  *  L  F  F  T  S  S  S  F </second_frame>
            <third_frame>   P  N  V  *  S  C  A  S  T  G  S  V  N  A  K  S  K  C  G  Q  K  A  I  Q  *  *  I  S  F  H  I  Q  D  S  G  S  *  D  G  *  H  A  I  D  K  T  Y  T  T  K  Q  P  L  Q  F  C  K  *  L  L  *  R  S  R  V  T  V  A  D  E  T  G  R  C  Q  Y  Q  G  H  *  I  C  N  Y  F  S  H  L  R  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0320D04.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="+" PGL_start="151985" PGL_stop="154740"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="151985" e_stop="152372"/>
            <exon e_start="152784" e_stop="152879"/>
            <exon e_start="152960" e_stop="153059"/>
            <exon e_start="153145" e_stop="153206"/>
            <exon e_start="153352" e_stop="153440"/>
            <exon e_start="154193" e_stop="154313"/>
            <exon e_start="154395" e_stop="154740"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.463" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="151985" e_stop="152372" e_length="388"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.998">
            <gDNA_intron_boundary i_start="152373" i_stop="152783" i_length="411"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="152784" e_stop="152879" e_length="96"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.976">
            <gDNA_intron_boundary i_start="152880" i_stop="152959" i_length="80"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="152960" e_stop="153059" e_length="100"/>
          </exon>
          <intron i_serial="3" don_prob="0.463" acc_prob="0.972">
            <gDNA_intron_boundary i_start="153060" i_stop="153144" i_length="85"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="153145" e_stop="153206" e_length="62"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.976">
            <gDNA_intron_boundary i_start="153207" i_stop="153351" i_length="145"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="153352" e_stop="153440" e_length="89"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.978">
            <gDNA_intron_boundary i_start="153441" i_stop="154192" i_length="752"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="154193" e_stop="154313" e_length="121"/>
          </exon>
          <intron i_serial="6" don_prob="0.985" acc_prob="0.991">
            <gDNA_intron_boundary i_start="154314" i_stop="154394" i_length="81"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="154395" e_stop="154740" e_length="346"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="151985" stop="152372"/>
              <exon start="152784" stop="152879"/>
              <exon start="152960" stop="153059"/>
              <exon start="153145" stop="153206"/>
              <exon start="153352" stop="153440"/>
              <exon start="154193" stop="154313"/>
              <exon start="154395" stop="154740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566031" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGAACCAAAAAAGAGAAGCAAACCTTTAAAAGATAAAAAAATTCTATGACTTCTCGGAGCAATTCTTTTTCTAATTTCTCAGAATCATCGTACGAATACGATGATAAGGATTGTTCCACCGTCACGACTTCGGATCGGGATGAGCCCCTGAATCCGGGTCATAGGAACAACTCGTTTAACGGGTTATTGGGTTTCACGTTCGGGTCCAAGAAGATGAGGAAGAAGAAACCCTTTTGTCAGGAAAAAGCAATTGTCGGGTTGGCTCTATTGGTGATCGGTTTTGTCGGGATGAATTGGTGGATGCTTTCCCGGATCCAGAACTCGGGTCGGGCTTCTCAGGTTGAGTTCAGGTTCTTGGAAGATAATTCCTCCACTCTATCAATTCGG : GAAGAACTGCTAAGGCTTGGGCTTGGCGAAGAGAGAAAGCCTCAGAAAACAATCTACGCACGATTGCTGGCTAAAGCTGCTCATTCCTTAGCTGAG : GGACAGAAAAAATCCGAGCCAAAAGATTTGTGGGCTGAACCGTATTTTGTTGCTTCCTCTTGGAAACCTTGTGCTGAGCAGCGTCAATGGCTACCTAGTG : AGGGAAAAAATGGTTACATTATTGTCACTGCAAATGGTGGGATAAATCAGCAGCGAGTAGCT : GTCTGCAATATTGTTGCTATTGCAAGATTACTCGATGCAACCTTGGTTCTTCCGAAATTTCTGTACAGTAGTGTTTGGAAAGATGTGAG : CCAGTTTGGCGAGATCTACCAGGAGGAGCATTTCATTGACTACCTGAAACCTGATATTCGTATAGTTAGAGAACTTCCTCAGGAGTTGCAGTCATTAGATCTAGAGGCCATTGGCAGTTTG : GTGACAGATGCAGATGTTGTAAAAGAAGCAAAGCCAGGTTTCTACAAGAAATATATTCTTCCTATTTTACATAAAAACGGAGTTGTTCATTTTCTTGGATTTGGGAATCGATTGGCATCTGACCCGTTACCACCTCAGGTGCAGGTAAACCCATCGAACTTGATATTAGGCTTCCTTGTTGATTTCTCAATTTTTCATATTATCTTCTCATTTAGTCTGATTCCATAATTTCTACCTTGGTTCCTGATTTGGGGACTTCATCTAGAGACTTCGATGCAGATGTAATTTTCATGCTCTGAAATTTGTTCCAAAGATAGAAGAAACTGGAGCTTTACTTATACGGAGA</gDNA_template>
            <first_frame> K  N  Q  K  R  E  A  N  L  *  K  I  K  K  F  Y  D  F  S  E  Q  F  F  F  *  F  L  R  I  I  V  R  I  R  *  *  G  L  F  H  R  H  D  F  G  S  G  *  A  P  E  S  G  S  *  E  Q  L  V  *  R  V  I  G  F  H  V  R  V  Q  E  D  E  E  E  E  T  L  L  S  G  K  S  N  C  R  V  G  S  I  G  D  R  F  C  R  D  E  L  V  D  A  F  P  D  P  E  L  G  S  G  F  S  G  *  V  Q  V  L  G  R  *  F  L  H  S  I  N  S   : G  R  T  A  K  A  W  A  W  R  R  E  K  A  S  E  N  N  L  R  T  I  A  G  *  S  C  S  F  L  S  *   : G  T  E  K  I  R  A  K  R  F  V  G  *  T  V  F  C  C  F  L  L  E  T  L  C  *  A  A  S  M  A  T  *  * :   G  K  K  W  L  H  Y  C  H  C  K  W  W  D  K  S  A  A  S  S   : C  L  Q  Y  C  C  Y  C  K  I  T  R  C  N  L  G  S  S  E  I  S  V  Q  *  C  L  E  R  C  E  :  P  V  W  R  D  L  P  G  G  A  F  H  *  L  P  E  T  *  Y  S  Y  S  *  R  T  S  S  G  V  A  V  I  R  S  R  G  H  W  Q  F   : G  D  R  C  R  C  C  K  R  S  K  A  R  F  L  Q  E  I  Y  S  S  Y  F  T  *  K  R  S  C  S  F  S  W  I  W  E  S  I  G  I  *  P  V  T  T  S  G  A  G  K  P  I  E  L  D  I  R  L  P  C  *  F  L  N  F  S  Y  Y  L  L  I  *  S  D  S  I  I  S  T  L  V  P  D  L  G  T  S  S  R  D  F  D  A  D  V  I  F  M  L  *  N  L  F  Q  R  *  K  K  L  E  L  Y  L  Y  G   </first_frame>
            <second_frame>  R  T  K  K  E  K  Q  T  F  K  R  *  K  N  S  M  T  S  R  S  N  S  F  S  N  F  S  E  S  S  Y  E  Y  D  D  K  D  C  S  T  V  T  T  S  D  R  D  E  P  L  N  P  G  H  R  N  N  S  F  N  G  L  L  G  F  T  F  G  S  K  K  M  R  K  K  K  P  F  C  Q  E  K  A  I  V  G  L  A  L  L  V  I  G  F  V  G  M  N  W  W  M  L  S  R  I  Q  N  S  G  R  A  S  Q  V  E  F  R  F  L  E  D  N  S  S  T  L  S  I  R  :  E  E  L  L  R  L  G  L  G  E  E  R  K  P  Q  K  T  I  Y  A  R  L  L  A  K  A  A  H  S  L  A  E  :  G  Q  K  K  S  E  P  K  D  L  W  A  E  P  Y  F  V  A  S  S  W  K  P  C  A  E  Q  R  Q  W  L  P  S   : E  G  K  N  G  Y  I  I  V  T  A  N  G  G  I  N  Q  Q  R  V  A  :  V  C  N  I  V  A  I  A  R  L  L  D  A  T  L  V  L  P  K  F  L  Y  S  S  V  W  K  D  V  S :   Q  F  G  E  I  Y  Q  E  E  H  F  I  D  Y  L  K  P  D  I  R  I  V  R  E  L  P  Q  E  L  Q  S  L  D  L  E  A  I  G  S  L  :  V  T  D  A  D  V  V  K  E  A  K  P  G  F  Y  K  K  Y  I  L  P  I  L  H  K  N  G  V  V  H  F  L  G  F  G  N  R  L  A  S  D  P  L  P  P  Q  V  Q  V  N  P  S  N  L  I  L  G  F  L  V  D  F  S  I  F  H  I  I  F  S  F  S  L  I  P  *  F  L  P  W  F  L  I  W  G  L  H  L  E  T  S  M  Q  M  *  F  S  C  S  E  I  C  S  K  D  R  R  N  W  S  F  T  Y  T  E  </second_frame>
            <third_frame>   E  P  K  K  R  S  K  P  L  K  D  K  K  I  L  *  L  L  G  A  I  L  F  L  I  S  Q  N  H  R  T  N  T  M  I  R  I  V  P  P  S  R  L  R  I  G  M  S  P  *  I  R  V  I  G  T  T  R  L  T  G  Y  W  V  S  R  S  G  P  R  R  *  G  R  R  N  P  F  V  R  K  K  Q  L  S  G  W  L  Y  W  *  S  V  L  S  G  *  I  G  G  C  F  P  G  S  R  T  R  V  G  L  L  R  L  S  S  G  S  W  K  I  I  P  P  L  Y  Q  F  G :   K  N  C  *  G  L  G  L  A  K  R  E  S  L  R  K  Q  S  T  H  D  C  W  L  K  L  L  I  P  *  L  R :   D  R  K  N  P  S  Q  K  I  C  G  L  N  R  I  L  L  L  P  L  G  N  L  V  L  S  S  V  N  G  Y  L  V  :  R  E  K  M  V  T  L  L  S  L  Q  M  V  G  *  I  S  S  E  *  L :   S  A  I  L  L  L  L  Q  D  Y  S  M  Q  P  W  F  F  R  N  F  C  T  V  V  F  G  K  M  *   : A  S  L  A  R  S  T  R  R  S  I  S  L  T  T  *  N  L  I  F  V  *  L  E  N  F  L  R  S  C  S  H  *  I  *  R  P  L  A  V  W :   *  Q  M  Q  M  L  *  K  K  Q  S  Q  V  S  T  R  N  I  F  F  L  F  Y  I  K  T  E  L  F  I  F  L  D  L  G  I  D  W  H  L  T  R  Y  H  L  R  C  R  *  T  H  R  T  *  Y  *  A  S  L  L  I  S  Q  F  F  I  L  S  S  H  L  V  *  F  H  N  F  Y  L  G  S  *  F  G  D  F  I  *  R  L  R  C  R  C  N  F  H  A  L  K  F  V  P  K  I  E  E  T  G  A  L  L  I  R  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0320D04.2" strand="+"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="152022" stop="152372"/>
                    <exon start="152784" stop="152879"/>
                    <exon start="152960" stop="153059"/>
                    <exon start="153145" stop="153206"/>
                    <exon start="153352" stop="153440"/>
                    <exon start="154193" stop="154313"/>
                    <exon start="154395" stop="154622"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1044</number_coding_nucleotides>
                  <number_encoded_amino_acids>348</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KNSMTSRSNSFSNFSESSYEYDDKDCSTVTTSDRDEPLNPGHRNNSFNGLLGFTFGSKKMRKKKPFCQEKAIVGLALLVIGFVGMNWWMLSRIQNSGRASQVEFRFLEDNSSTLSIREELLRLGLGEERKPQKTIYARLLAKAAHSLAEGQKKSEPKDLWAEPYFVASSWKPCAEQRQWLPSEGKNGYIIVTANGGINQQRVAVCNIVAIARLLDATLVLPKFLYSSVWKDVSQFGEIYQEEHFIDYLKPDIRIVRELPQELQSLDLEAIGSLVTDADVVKEAKPGFYKKYILPILHKNGVVHFLGFGNRLASDPLPPQVQVNPSNLILGFLVDFSIFHIIFSFSLIP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 48 chains have been computed
$ 
$ memory statistics:
$ 57200 bytes spliced alignments in total
$ 26 spliced alignments have been stored
$ 2200 bytes was the average size of a spliced alignment
$ 26848 bytes predicted gene locations in total
$ 17 predicted gene locations have been stored
$ 1579 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 51 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:31:06
-->
