<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:31:04"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E313280" ref_strand="+" ref_description="SGN-E313280 [cTOA-18-P19]">
      <seq>attgaaaaactttcaatctgatgctctttctttgagattgcaatgactcgttctcctgctgcaacatccaacacctccagaaagagggcaagaaaatcaacaccttcatgtcgaaggatatggactccagtagaggaacttactcttatagatggattaaaagaattgtgtgttaatggttggagaggagataatgaaacctttagacatggatatttaatggaattggaacactacatgaatgctcgtcatcctagttgtggattgaaatctctaccacatgttgattctaaaataagagcatggaaaaagagttatgcaaccatatcgttgctaaagagtcgaagtggtttaggatttcaatatagtgacggaagtatcttagttgattatccaaaagcttgggatgacttgataaaggttgatccaaatgccaaatcaatgaacttaaaaaaatggccattatttgctgactgggaagagatatttggcaaggatagagctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="50485" stop="53958"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50785" g_stop="50820" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50821" i_stop="53076" i_length="2256">
            <donor d_prob="0.992" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53077" g_stop="53460" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="420" r_length="384" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="53461" i_stop="53571" i_length="111">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53572" g_stop="53658" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="507" r_length="87" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E313280" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>507</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E313280" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50785" e_stop="50820"/>
          <exon e_start="53077" e_stop="53460"/>
          <exon e_start="53572" e_stop="53658"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGAAAAACTTTCAATCTGACGTTCTTTCTTTGAGGTTAGAAGTTCTCAAACTCAAATTTTGGCTGATTTTTTTATTTCTTCTTCTTCTCCTCCTCCAATTTTCTCTTTTGTGTTTTTCCTCTTGTTAATCCGATGAGATGAATGAAATTGTAGATCTTCTCAGTATTTTCTAGTTAAGTTGATGTTTGAGTACACCTAAATTTGATGTGGGTTTTGTTTTATTTGTTCAAAATTTGTGATTTATTAACAAATGGGTTCATTAAGTTTAGTTGCTTTAGCTTCTAAAATTGCAAAAGATAAACATGTATTTGCAGTTTGACAAAATAGTATTAGTATTCTAGCTTTAGAAGCCAAACAAAAATAAACATTTTACCATGTTTTTCATGTTACTTTTCATTTTTTTCAATAAAATTGAACATTTTAGTATAAAACCATCTATTACCTTCCTATTATACAAAATGTGTCTGCAATACTTAATTAAGTAACATGATTGATACTCTTTTTTCTTTTGGGATTCAATTTGATCATGATGTTGTCATTTTTAATTGGAAAATAGGTATAAATGGATTCTCAGCAATTGTGTGATGTTGAATCCTTTATGATTCTCGAGGAGATTGTGGTGCATTCCTATATTGTCCTTATCTGCTTTTTTATGGCTATTTACAGCATGTTATTAAGAAAACAATCTACAAATAGGCGGGGCATTCGATATTGTATGAGTGCTAGAATTCAAAAAATCTTGTCTCATCTGAATGTTCTCATTCGTGACAATGATATTGTATGTATTGACAAGCTTAGGATGGATAGAAACGCCTTTCACATATTAGCCTCCTTAGCCAAGAATATTGGAGGTTTGACTGACAGTAAAAATATGTCGAGTACTGAAAAGTTAGCTATGTTTTTAAATATTTTGGCTCATCATGAAAAGAACAGGTCTATCAAAGTTGATTATATTAGATCGGGGTGGAGTGTAAGTCGAGCCTTTAATGAATGTCTAAGAGCTATTCTTAAACTAACTCCAGTGTTACTTGTTAAACCTAATCCGGTGCTCGAAGCTGATAGTGATGATCGATGGAAATGGTTTAAGGTAGGTAAATTTCAATCTAACATTTGATTTACTACAATAAACTTGAAATATTATGGTGAAAGTATTTTTATTTTTAATAGTCATTTAGTATTTAGATTTGAATTTATCTTATAGGGTTGTCTTGGTGCATTGGATGGTACTTACATTTCCATTAGAGTTGAAGCAATATATAAACCAAGATACAGAACACGAAAAGGAGATATAGCAACTAATGTCTTGGGGGTTTGTGATAGAAATCTCAACTTTATTTATGTATTACCTGGTTGGGAGGGATCAGCCGCTGATGGTCGTGTATTGCGAGATGCTGTTGTACGAAGAAATGGGTTGAAAGTACCTCATGGTATGCTAAATAATAGGCAGACCCTTGTTTATTTCTACTACATCAAAATAGAATAATATTTAAAGTAATTATATTATTATTTATGTTTTTAGGCAATTACTATTTGTGCGACGGAGGATATACAAATGGAAATGGTTTTCTGTCTCCCTATCGAGGATATAGATATTGGCTAAAGGATTGGCAAGGTGACAATCCATCACCTCGATGTCGAGAAGAGCTCTTTAATATGAAGCATGCTAGGGCACGTAATGTCATTGAAAGAACATTTGGACTATTAAAAGGACGTTGAGGAATTCTTAGAAGTCCTTCGTGGTACTCAGTTAAGGTTCACAATAGAATTATTAGTGCATGTTGTTTGATACACAATTTCATTCGAAGAGAGATGGAAGCTGACCCCTTAGATGTGGAAATGGTGGAGAATCAACATGAACATGAAAATATTAATACAATTGAAACATCTGATGAGTGGACCACTTGGAGGGATGAACTAGCTCAGTCTATGTGGAATGAACGATTGGGAAATCAATCTTTTTAATTTTAAACTATGTGTTAACTTTTGGTGTGCTTATGCACTTTTGCTTTTGGTTTTCCATTCACTGTAAAATGTAATACCGTCTATTATTTTGTAAAAATTAATGGTCAATCTTTTGTATGTCTCACATTGTTATTTGTACAAACAAACAGTGAATCTCAATGTATATCTATTATTTTATAATATAAGCAGTGAAATTCTCTTTATCTCTTCACACTATCTTTTTCTTAGACCAATAAAGTTGTATTACAATTAATTTGATTATGATTGTGATAATTTACTTGTAAGTTGTAACTTAGTATTACTTGTGATTTCATTTATAATTTTACAGATTGAAATGGCTAGTTTTCCTGCTGCAACATCCAACACGTCCAGAAAGAGGGCAAAAAAATCAACACCTTCATGTCGAAGGATATGGACTCCAGAAGAGGAACTTACTCTTATAGATGGATTAAAAGAATTTTGTGTTAATGGTTGGAGAGGAGATAATGGAACCTTTAGACATGGATATTTAATGGAATTGGAACACTACATGAATGCTCGTCATCCTAGTTGTGGATTGAAATCTCTACCACATGTTGATTCTAAAATAAGAGCATGGAAAAAGAGTTATGCAACCATATCGTTGCTAAAGAGTCGAAGTGGTTTAGGATTTCAATATAGTGACGGAAGTATCTTAGTTGATTATCCAAAAGCTTGGGATGACTTGATAAAGGTGATTTATATTTATTTGAAATCATTACGCAATTTCTACTTACTTGTATTTTCTCTTGGTTATGGATCTCTGTCTTTGGAATATTGACAGTTACTTTCTTTATTTTTCTAGGTTGATCCAAATGCCAAATCAATGAACTTAAAAAAATGGCCATTATTTGCTGACTGGGAAGAGATATTTGGCAAGGATAGAGCTACT</genome_strand>
        <mrna_strand>ATTGAAAAACTTTCAATCTGATGCTCTTTCTTTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAATGACTCGTTCTCCTGCTGCAACATCCAACACCTCCAGAAAGAGGGCAAGAAAATCAACACCTTCATGTCGAAGGATATGGACTCCAGTAGAGGAACTTACTCTTATAGATGGATTAAAAGAATTGTGTGTTAATGGTTGGAGAGGAGATAATGAAACCTTTAGACATGGATATTTAATGGAATTGGAACACTACATGAATGCTCGTCATCCTAGTTGTGGATTGAAATCTCTACCACATGTTGATTCTAAAATAAGAGCATGGAAAAAGAGTTATGCAACCATATCGTTGCTAAAGAGTCGAAGTGGTTTAGGATTTCAATATAGTGACGGAAGTATCTTAGTTGATTATCCAAAAGCTTGGGATGACTTGATAAAG...............................................................................................................GTTGATCCAAATGCCAAATCAATGAACTTAAAAAAATGGCCATTATTTGCTGACTGGGAAGAGATATTTGGCAAGGATAGAGCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E233833" ref_strand="+" ref_description="SGN-E233833 [cLEL-8-C24](-)">
      <seq>gcatcatcttctaaagtcaacgaaaaaggtagatgcaaaaaaaagaaaaacagttgaagatgataatgagactgttcttaaaggtttgatggaggtgatgaaacaattcactgaaagccatgataagagaatggcttctttaattgacaagctaggagagcgtgatctatctgaaattcgtggtaagatattttctattattggatcccctgcatatgaaatatacaactcagatgaacgagttaaggcaacaatgggaattactcaagatataaagagaatggaattcttcttaagcatcatcgaaattgaacgtcacagtatgatatggatgattattaatgataagctttaattcactgaatggtttttgtgtagatattttgtaaggtctaaccataatgggatcttttgttacctagtagaatgtccaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="53668" stop="54703"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53968" g_stop="54404" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="438" r_length="438" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54405" i_stop="54495" i_length="91">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.939" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54496" g_stop="54508" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="451" r_length="13" r_score="0.538"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E233833" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>450</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E233833" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53968" e_stop="54404"/>
          <exon e_start="54496" e_stop="54508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATCATCTTCTAAAGTCAACGAAAAAGGTAGATGC-AAAAAAAGAAAAACAGTTGAAGATGATAATGAGACTGTTCTTAAAGGTTTGATGGAGGTGATGAAACAATTCACTGAAAGCCATGATAAGAGAATGGCTTCTTTAATTGACAAGCTAGGAGAGCGTGATCTATCTGAAATTCGTGGTAAGATATTTTCTATTATTGGATCCCCTGCATATGAAATATACAACTCAGATGAACGAGTTAAGGCAGCAATGGGAATTACTCAAGATATAAAGAGAATGGAATTCTTCTTAAGCATCAGCGAACTTGAACGTCACAGTATGATATGGATGATTATTAATGATAAGCTTTAATTCACTGAATGGTTTTTGTGTAGCTATTTTGTAAGGTCTAACCATAATGGGATCTTTTGTTACCTAGTAGAATGTCCACAAATGTGCATATATGTGAATGTTGTGGGCTTAAAGTAGGTTGTTTTTGTATAACAAATACATGATTATGTTCAATATTAGTGCTTTTGTAAGTAGCCAACTAAAATGA</genome_strand>
        <mrna_strand>GCATCATCTTCTAAAGTCAACGAAAAAGGTAGATGCAAAAAAAAGAAAAACAGTTGAAGATGATAATGAGACTGTTCTTAAAGGTTTGATGGAGGTGATGAAACAATTCACTGAAAGCCATGATAAGAGAATGGCTTCTTTAATTGACAAGCTAGGAGAGCGTGATCTATCTGAAATTCGTGGTAAGATATTTTCTATTATTGGATCCCCTGCATATGAAATATACAACTCAGATGAACGAGTTAAGGCAACAATGGGAATTACTCAAGATATAAAGAGAATGGAATTCTTCTTAAGCATCATCGAAATTGAACGTCACAGTATGATATGGATGATTATTAATGATAAGCTTTAATTCACTGAATGGTTTTTGTGTAGATATTTTGTAAGGTCTAACCATAATGGGATCTTTTGTTACCTAGTAGAATGTCCAAAAAA...........................................................................................AAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E234436" ref_strand="+" ref_description="SGN-E234436 [cLEL-8-C24](-)">
      <seq>aaaaaaaagaaaaacagttgaagatgataatgagactgttcttaaaggtttgatggaggtgatgaaacaattcactgaaagccatgataagagaatggcttctttaattgacaagctaggagagcgtgatctatctgaaattcgtggtaagatattttctattattggatcccctgcatatgaaatatacaactcagatgaacgagttaaggcaacaatgggaattactcaagatataaagagaatggaattcttcttaagcatcatcgaaattgaacgtcacagtatgatatggatgattattaatgataagctttaattcactgaatggtttttgtgtagatattttgtaaggtctaaccataatgggatcttttgttacctagtagaatgtccaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="53704" stop="54703"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54003" g_stop="54404" g_length="402"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="402" r_length="402" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54405" i_stop="54495" i_length="91">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.939" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54496" g_stop="54508" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="415" r_length="13" r_score="0.538"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E234436" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>415</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E234436" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54003" e_stop="54404"/>
          <exon e_start="54496" e_stop="54508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAAAAGAAAAACAGTTGAAGATGATAATGAGACTGTTCTTAAAGGTTTGATGGAGGTGATGAAACAATTCACTGAAAGCCATGATAAGAGAATGGCTTCTTTAATTGACAAGCTAGGAGAGCGTGATCTATCTGAAATTCGTGGTAAGATATTTTCTATTATTGGATCCCCTGCATATGAAATATACAACTCAGATGAACGAGTTAAGGCAGCAATGGGAATTACTCAAGATATAAAGAGAATGGAATTCTTCTTAAGCATCAGCGAACTTGAACGTCACAGTATGATATGGATGATTATTAATGATAAGCTTTAATTCACTGAATGGTTTTTGTGTAGCTATTTTGTAAGGTCTAACCATAATGGGATCTTTTGTTACCTAGTAGAATGTCCACAAATGTGCATATATGTGAATGTTGTGGGCTTAAAGTAGGTTGTTTTTGTATAACAAATACATGATTATGTTCAATATTAGTGCTTTTGTAAGTAGCCAACTAAAATGA</genome_strand>
        <mrna_strand>AAAAAAAAGAAAAACAGTTGAAGATGATAATGAGACTGTTCTTAAAGGTTTGATGGAGGTGATGAAACAATTCACTGAAAGCCATGATAAGAGAATGGCTTCTTTAATTGACAAGCTAGGAGAGCGTGATCTATCTGAAATTCGTGGTAAGATATTTTCTATTATTGGATCCCCTGCATATGAAATATACAACTCAGATGAACGAGTTAAGGCAACAATGGGAATTACTCAAGATATAAAGAGAATGGAATTCTTCTTAAGCATCATCGAAATTGAACGTCACAGTATGATATGGATGATTATTAATGATAAGCTTTAATTCACTGAATGGTTTTTGTGTAGATATTTTGTAAGGTCTAACCATAATGGGATCTTTTGTTACCTAGTAGAATGTCCAAAAAA...........................................................................................AAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E374749" ref_strand="+" ref_description="SGN-E374749 [TUS-14-P20](-)">
      <seq>aataggttcaaaaagacagaaaccttgtctctctgcttcccagaaaagagacgaggcatatttaaggaggagtgaagataacatgtgggtacctcctcgatcccattttaatctcctccaagaaaaccatgctcatgatccttggagggtgttggttatttgcatgcttttgaattgcaccaccggtgtgcaggttaggagagtggtagacgagtttttcactctgtgtccaaatgctgtggcagcaacagaggttgctgtagaggatatagaaaagttgctgcgacctttaggattatatacaaagaggtcactgtctattccgcgtctctctcaagaatatcttggaaaaaattggactcatgtcacacagctgcatggtattggcaagtatgcagctgatgcatatgcaatattttgtacgggcaattgggatcaagtacatccaaatgatcacatgctaacaaaatactgggaattcctgcatgcaaatggctcggcctcaacctgagggtgcaatgtatttacctgaagatgatgcatagttagggtatcttttgggggtcagttgcatattttcggtagattaacctcttgaccatttttgtggtgtatagtacttgcctaagcaacagcttaattaatatatcatctctgcataaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="64216" stop="62429"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63916" g_stop="63724" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63723" i_stop="63275" i_length="449">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.642" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63274" g_stop="63078" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="390" r_length="197" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63077" i_stop="63005" i_length="73">
            <donor d_prob="0.924" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63004" g_stop="62728" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="667" r_length="277" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E374749" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E374749" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63916" e_stop="63724"/>
          <exon e_start="63274" e_stop="63078"/>
          <exon e_start="63004" e_stop="62728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAGGTTCAAAAAGACAGAAACCTTGTCTCTCTGCTTCCCAGAAAAGAGACGAGGCATATTTAAGGAGGAGTGAAGATAACATGTGGGTACCTCCTCGATCCCATTTTAATCTCCTCCAAGAAAACCATGCTCATGATCCTTGGAGGGTGTTGGTTATTTGCATGCTTTTGAATTGCACCACCGGTGTGCAGGTAATTGTTGCCACCGTTCTCTTTCTTATGTAGTTAACAAACTTATGATTCTTGAGATGTTTGGCTTGTTTGACAAGATTAAGTTTCCTACATTTTAAGCAGCAGCATCCTATGAGCAATTAGGAAACAAATTTTAGACCTAAAAAGTGATATAGGATAATTCTCCATTGTTAAATGAGGGCATATACAGGCAGTTGTTAACTGATAAATTATTGTGCTAAAGTATCAGCCAGTTGATTGCTTTGCATTACCTTAAAAGTACTGGTGGACCTATTTAGGTAAGGAGCAGTCAATTTGTATGGGGCATTTCCCCCTTTCCTGTGGTTCAGGCTTCATGTTGATCAGAAGTGAAGCAATGAGAGCGACATAGTTGTTCCTGTCTTAAATTTTTGTAATGACTTTATTCTGCTTTTGAGATCACATACTAACAGTGAGCACATGCCTGTTAGGTTAGGAGAGTGGTAGACGAGTTTTTCACTCTGTGTCCAAATGCTGTGGCAGCAACAGAGGTTGCTGTAGAGGATATAGAAAAGTTGCTGCGACCTTTAGGATTATATACAAAGAGGTCACTGTCTATTCCGCGTCTCTCTCAAGAATATCTTGGAAAAAATTGGACTCATGTCACACAGCTGCATGGTATTGGCAAGTAAGGGAACTCTACCTTTTGCACCTAAGTAAATGGATTTTAGCTCGACTTGATTAAGTGTTTTTCTTTCCAGGTATGCAGCTGATGCATATGCAATATTTTGTACGGGCAATTGGGATCAAGTACATCCAAATGATCACATGCTAACAAAATACTGGGAATTCCTGCATGCAAATGGCTCGGCCTCAACCTGAGGGTGCAATGTATTTACCTGAAGATGATGCATAGTTAGGGTATCTTTTGGGGGTCAGTTGCATATTTTCGGTAGATTAACCTCTTGACCATTTTTGTGGTGTATAGTACTTGCCTAAGCAACAGCTTAATTAATATATCATCTCTGCATATGACAG</genome_strand>
        <mrna_strand>AATAGGTTCAAAAAGACAGAAACCTTGTCTCTCTGCTTCCCAGAAAAGAGACGAGGCATATTTAAGGAGGAGTGAAGATAACATGTGGGTACCTCCTCGATCCCATTTTAATCTCCTCCAAGAAAACCATGCTCATGATCCTTGGAGGGTGTTGGTTATTTGCATGCTTTTGAATTGCACCACCGGTGTGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGGAGAGTGGTAGACGAGTTTTTCACTCTGTGTCCAAATGCTGTGGCAGCAACAGAGGTTGCTGTAGAGGATATAGAAAAGTTGCTGCGACCTTTAGGATTATATACAAAGAGGTCACTGTCTATTCCGCGTCTCTCTCAAGAATATCTTGGAAAAAATTGGACTCATGTCACACAGCTGCATGGTATTGGCAA.........................................................................GTATGCAGCTGATGCATATGCAATATTTTGTACGGGCAATTGGGATCAAGTACATCCAAATGATCACATGCTAACAAAATACTGGGAATTCCTGCATGCAAATGGCTCGGCCTCAACCTGAGGGTGCAATGTATTTACCTGAAGATGATGCATAGTTAGGGTATCTTTTGGGGGTCAGTTGCATATTTTCGGTAGATTAACCTCTTGACCATTTTTGTGGTGTATAGTACTTGCCTAAGCAACAGCTTAATTAATATATCATCTCTGCATAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E346525" ref_strand="+" ref_description="SGN-E346525 [cTOF-28-I13]">
      <seq>ttatttgcatgcttttgaattgcaccaccggtgtgcaggttaggagagtggtagacgaagtttttcactctgtgtccaaatgctgtggcagcaacagaggttgctgtagaggatatagaaaagttgctgcgacctttaggattatatacaaagaggtcactgtctattccgcgtctctctcaagaatatcttggaaaaaattggactcatgtcacacagctgcatggtattggcaagtatgcagctgatgcatatgcaatattttgtacgggcaattgggatcaagtacatccaaatgatcacatgctaacaaaatactgggaattcctgcatgcaaatggctcggcctcaactggagggtgcaatgtatttacctgaagatgatgcatagttagggtatcttttgggggtcagttgcatattttcggtagattaacctcttgaccatttttgtggtgtatagtacttgcctaagcaacagcttaattaatatatcatctctgcataaaaaaaaaaaaaaattnnnaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="64061" stop="62429"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63761" g_stop="63724" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63723" i_stop="63275" i_length="449">
            <donor d_prob="0.987" d_score="0.00"/>
            <acceptor a_prob="0.642" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63274" g_stop="63078" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="236" r_length="198" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63077" i_stop="63005" i_length="73">
            <donor d_prob="0.924" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63004" g_stop="62728" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="513" r_length="277" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="527" polyA_stop="557"/>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E346525" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E346525" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63761" e_stop="63724"/>
          <exon e_start="63274" e_stop="63078"/>
          <exon e_start="63004" e_stop="62728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTTGCATGCTTTTGAATTGCACCACCGGTGTGCAGGTAATTGTTGCCACCGTTCTCTTTCTTATGTAGTTAACAAACTTATGATTCTTGAGATGTTTGGCTTGTTTGACAAGATTAAGTTTCCTACATTTTAAGCAGCAGCATCCTATGAGCAATTAGGAAACAAATTTTAGACCTAAAAAGTGATATAGGATAATTCTCCATTGTTAAATGAGGGCATATACAGGCAGTTGTTAACTGATAAATTATTGTGCTAAAGTATCAGCCAGTTGATTGCTTTGCATTACCTTAAAAGTACTGGTGGACCTATTTAGGTAAGGAGCAGTCAATTTGTATGGGGCATTTCCCCCTTTCCTGTGGTTCAGGCTTCATGTTGATCAGAAGTGAAGCAATGAGAGCGACATAGTTGTTCCTGTCTTAAATTTTTGTAATGACTTTATTCTGCTTTTGAGATCACATACTAACAGTGAGCACATGCCTGTTAGGTTAGGAGAGTGGTAGACG-AGTTTTTCACTCTGTGTCCAAATGCTGTGGCAGCAACAGAGGTTGCTGTAGAGGATATAGAAAAGTTGCTGCGACCTTTAGGATTATATACAAAGAGGTCACTGTCTATTCCGCGTCTCTCTCAAGAATATCTTGGAAAAAATTGGACTCATGTCACACAGCTGCATGGTATTGGCAAGTAAGGGAACTCTACCTTTTGCACCTAAGTAAATGGATTTTAGCTCGACTTGATTAAGTGTTTTTCTTTCCAGGTATGCAGCTGATGCATATGCAATATTTTGTACGGGCAATTGGGATCAAGTACATCCAAATGATCACATGCTAACAAAATACTGGGAATTCCTGCATGCAAATGGCTCGGCCTCAACCTGAGGGTGCAATGTATTTACCTGAAGATGATGCATAGTTAGGGTATCTTTTGGGGGTCAGTTGCATATTTTCGGTAGATTAACCTCTTGACCATTTTTGTGGTGTATAGTACTTGCCTAAGCAACAGCTTAATTAATATATCATCTCTGCATATGACAG</genome_strand>
        <mrna_strand>TTATTTGCATGCTTTTGAATTGCACCACCGGTGTGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGGAGAGTGGTAGACGAAGTTTTTCACTCTGTGTCCAAATGCTGTGGCAGCAACAGAGGTTGCTGTAGAGGATATAGAAAAGTTGCTGCGACCTTTAGGATTATATACAAAGAGGTCACTGTCTATTCCGCGTCTCTCTCAAGAATATCTTGGAAAAAATTGGACTCATGTCACACAGCTGCATGGTATTGGCAA.........................................................................GTATGCAGCTGATGCATATGCAATATTTTGTACGGGCAATTGGGATCAAGTACATCCAAATGATCACATGCTAACAAAATACTGGGAATTCCTGCATGCAAATGGCTCGGCCTCAACTGGAGGGTGCAATGTATTTACCTGAAGATGATGCATAGTTAGGGTATCTTTTGGGGGTCAGTTGCATATTTTCGGTAGATTAACCTCTTGACCATTTTTGTGGTGTATAGTACTTGCCTAAGCAACAGCTTAATTAATATATCATCTCTGCATAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E693067" ref_strand="+" ref_description="SGN-E693067 [LH_Ea10F17]">
      <seq>ctctctcgaatgctcatctccatgcagaagtcttcagaaactggttctatgattggaaatgagagtcatttatcacattgggaaggaggctgtggaccgaaagctggtaaaactgtgttcgagccttgcttatctcagaatcagatcaatgagaagatgattgaacagaaagcacgagtggtttccccttactttttgaactcaaggaatggagaaactgaaggttgtggactgaaagctggtaaaactgtgttcgagccttgcttatctcagaatcagatcaatgagaagatgattgaacaaaaagcacgagcggtttgcccttactttttgaactcaaggaatggagaaactgaaatgaaaaaaggtaggtctgtagaatgtgtgaagaaaagaaatgataaaaaattacgaaccaaagttcgagtggtttccccttactttgctaacttaaaagtgggagaagaaataaaggtaggtaaggatagttcaaacgcttcgaagaactgtctcaatggaagaaaggtttctccctactttcagaatgcatatcgtgaaaagaagaagagtacaataggttcaaaaagacagaaaccttgtctctctgcttcccagaaaagagacgaggcatatttaaggaggagtgaagataacatgtgggtacctcctcgatcccattttaatctcctccaagaaaaccatgctcatgatccttggagggtgttggttatttgcatgcttttgaattgcaccaccggtgtgcaggttaggagagtggtagacgagtttttcactctgtgtccaaatgctttggcagcaacagaagttgctgtagaggatatagaaaagttgctgcgacctttaggattata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="64788" stop="62868"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64488" g_stop="63724" g_length="765"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="765" r_length="765" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63723" i_stop="63275" i_length="449">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.642" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63274" g_stop="63168" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="766" r_stop="872" r_length="107" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E693067" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>872</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E693067" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64488" e_stop="63724"/>
          <exon e_start="63274" e_stop="63168"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCTCGAACGCTCATCTCCATGCAGAAGTCTTCAGAAACTGGTTCTATGATTGGAAATGAGAGTCATTTATCACATTGGGAAGGAGGCTGTGGACCGAAAGCTGGTAAAACTGTGTTCGAGCCTTGCTTATCTCAGAATCAGATCAATGAGAAGATGATTGAACAGAAAGCACGAGTGGTTTCCCCTTACTTTTTGAACTCAAGGAATGGAGAAACTGAAGGTTGTGGACTGAAAGCTGGTAAAACTGTGTTCGAGCCTTGCTTATCTCAAAATCAGATCAATGAGAAGATGATTGAACAGAAAGCACGAGCGGTTTGCCCTTACTTTTTGAACTCAAGGAATGGAGAAACTGAAATGAAAAAAGGCAGGTCTGTAGAATGTGTGAAGAAAAGAAATGATAAAAAATTACGAACCAAAGTTCGAGTGGTTTCCCCTTACTTTGCTAACTTAAAAGTGGGAGAAGAAATAAAGGTAGGTAAGGATAGTTCAAACGCTTCGAAGAACTGTCTCAATGGAAGAAAGGTTTCTCCCTACTTTCAGAATGCATATCGTGAAAAGAAGAAGAGTACAATAGGTTCAAAAAGACAGAAACCTTGTCTCTCTGCTTCCCAGAAAAGAGACGAGGCATATTTAAGGAGGAGTGAAGATAACATGTGGGTACCTCCTCGATCCCATTTTAATCTCCTCCAAGAAAACCATGCTCATGATCCTTGGAGGGTGTTGGTTATTTGCATGCTTTTGAATTGCACCACCGGTGTGCAGGTAATTGTTGCCACCGTTCTCTTTCTTATGTAGTTAACAAACTTATGATTCTTGAGATGTTTGGCTTGTTTGACAAGATTAAGTTTCCTACATTTTAAGCAGCAGCATCCTATGAGCAATTAGGAAACAAATTTTAGACCTAAAAAGTGATATAGGATAATTCTCCATTGTTAAATGAGGGCATATACAGGCAGTTGTTAACTGATAAATTATTGTGCTAAAGTATCAGCCAGTTGATTGCTTTGCATTACCTTAAAAGTACTGGTGGACCTATTTAGGTAAGGAGCAGTCAATTTGTATGGGGCATTTCCCCCTTTCCTGTGGTTCAGGCTTCATGTTGATCAGAAGTGAAGCAATGAGAGCGACATAGTTGTTCCTGTCTTAAATTTTTGTAATGACTTTATTCTGCTTTTGAGATCACATACTAACAGTGAGCACATGCCTGTTAGGTTAGGAGAGTGGTAGACGAGTTTTTCACTCTGTGTCCAAATGCTGTGGCAGCAACAGAGGTTGCTGTAGAGGATATAGAAAAGTTGCTGCGACCTTTAGGATTATA</genome_strand>
        <mrna_strand>CTCTCTCGAATGCTCATCTCCATGCAGAAGTCTTCAGAAACTGGTTCTATGATTGGAAATGAGAGTCATTTATCACATTGGGAAGGAGGCTGTGGACCGAAAGCTGGTAAAACTGTGTTCGAGCCTTGCTTATCTCAGAATCAGATCAATGAGAAGATGATTGAACAGAAAGCACGAGTGGTTTCCCCTTACTTTTTGAACTCAAGGAATGGAGAAACTGAAGGTTGTGGACTGAAAGCTGGTAAAACTGTGTTCGAGCCTTGCTTATCTCAGAATCAGATCAATGAGAAGATGATTGAACAAAAAGCACGAGCGGTTTGCCCTTACTTTTTGAACTCAAGGAATGGAGAAACTGAAATGAAAAAAGGTAGGTCTGTAGAATGTGTGAAGAAAAGAAATGATAAAAAATTACGAACCAAAGTTCGAGTGGTTTCCCCTTACTTTGCTAACTTAAAAGTGGGAGAAGAAATAAAGGTAGGTAAGGATAGTTCAAACGCTTCGAAGAACTGTCTCAATGGAAGAAAGGTTTCTCCCTACTTTCAGAATGCATATCGTGAAAAGAAGAAGAGTACAATAGGTTCAAAAAGACAGAAACCTTGTCTCTCTGCTTCCCAGAAAAGAGACGAGGCATATTTAAGGAGGAGTGAAGATAACATGTGGGTACCTCCTCGATCCCATTTTAATCTCCTCCAAGAAAACCATGCTCATGATCCTTGGAGGGTGTTGGTTATTTGCATGCTTTTGAATTGCACCACCGGTGTGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGGAGAGTGGTAGACGAGTTTTTCACTCTGTGTCCAAATGCTTTGGCAGCAACAGAAGTTGCTGTAGAGGATATAGAAAAGTTGCTGCGACCTTTAGGATTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E374750" ref_strand="+" ref_description="SGN-E374750 [TUS-14-P20]">
      <seq>agaatcagatcaatgagaagatgattgaacagaaagcacgagtggtttccccttactttttgaactcaaggaatggagaaactgaaggttgtggactgaaagctggtaaaactgtgttcgagccttgcttatctcaaaatcagatcaatgagaagatgattgaacagaaagcacgagcggtttgcccttactttttgaactcaaggaatggagaaactgaaatgaaaaaaggcaggtctgtagaatgtgtgaagaaaagaaatgataaaaaattacgaaccaaagttcgagtggtttccccttactttgctaacttaaaagtgggagaagaaataaaggtaggtaaggatagttcaaacgcttcgaagaactgtctcaatggaagaaaggtttctccctactttcagaatgcatatcgtgaaaagaagaagagtacaataggttcaaaaagacagaaaccttgtctctctgcttcccagaaaagagacgaggcatatttaaggaggagtgaagataacatgtgggtacctcctcgatcccattttaatctcctccaagaaaaccatgctcatgatccttggagggtgttggttatttgcatgcttttgaattgcaccaccggtgtgcaggttangagagtggtagacgagttttttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="64652" stop="62946"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64352" g_stop="63724" g_length="629"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="629" r_length="629" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63723" i_stop="63275" i_length="449">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.642" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63274" g_stop="63246" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="630" r_stop="658" r_length="29" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E374750" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>658</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E374750" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64352" e_stop="63724"/>
          <exon e_start="63274" e_stop="63246"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATCAGATCAATGAGAAGATGATTGAACAGAAAGCACGAGTGGTTTCCCCTTACTTTTTGAACTCAAGGAATGGAGAAACTGAAGGTTGTGGACTGAAAGCTGGTAAAACTGTGTTCGAGCCTTGCTTATCTCAAAATCAGATCAATGAGAAGATGATTGAACAGAAAGCACGAGCGGTTTGCCCTTACTTTTTGAACTCAAGGAATGGAGAAACTGAAATGAAAAAAGGCAGGTCTGTAGAATGTGTGAAGAAAAGAAATGATAAAAAATTACGAACCAAAGTTCGAGTGGTTTCCCCTTACTTTGCTAACTTAAAAGTGGGAGAAGAAATAAAGGTAGGTAAGGATAGTTCAAACGCTTCGAAGAACTGTCTCAATGGAAGAAAGGTTTCTCCCTACTTTCAGAATGCATATCGTGAAAAGAAGAAGAGTACAATAGGTTCAAAAAGACAGAAACCTTGTCTCTCTGCTTCCCAGAAAAGAGACGAGGCATATTTAAGGAGGAGTGAAGATAACATGTGGGTACCTCCTCGATCCCATTTTAATCTCCTCCAAGAAAACCATGCTCATGATCCTTGGAGGGTGTTGGTTATTTGCATGCTTTTGAATTGCACCACCGGTGTGCAGGTAATTGTTGCCACCGTTCTCTTTCTTATGTAGTTAACAAACTTATGATTCTTGAGATGTTTGGCTTGTTTGACAAGATTAAGTTTCCTACATTTTAAGCAGCAGCATCCTATGAGCAATTAGGAAACAAATTTTAGACCTAAAAAGTGATATAGGATAATTCTCCATTGTTAAATGAGGGCATATACAGGCAGTTGTTAACTGATAAATTATTGTGCTAAAGTATCAGCCAGTTGATTGCTTTGCATTACCTTAAAAGTACTGGTGGACCTATTTAGGTAAGGAGCAGTCAATTTGTATGGGGCATTTCCCCCTTTCCTGTGGTTCAGGCTTCATGTTGATCAGAAGTGAAGCAATGAGAGCGACATAGTTGTTCCTGTCTTAAATTTTTGTAATGACTTTATTCTGCTTTTGAGATCACATACTAACAGTGAGCACATGCCTGTTAGGTTAGGAGAGTGGTAGACGAGTTTTTCAC</genome_strand>
        <mrna_strand>AGAATCAGATCAATGAGAAGATGATTGAACAGAAAGCACGAGTGGTTTCCCCTTACTTTTTGAACTCAAGGAATGGAGAAACTGAAGGTTGTGGACTGAAAGCTGGTAAAACTGTGTTCGAGCCTTGCTTATCTCAAAATCAGATCAATGAGAAGATGATTGAACAGAAAGCACGAGCGGTTTGCCCTTACTTTTTGAACTCAAGGAATGGAGAAACTGAAATGAAAAAAGGCAGGTCTGTAGAATGTGTGAAGAAAAGAAATGATAAAAAATTACGAACCAAAGTTCGAGTGGTTTCCCCTTACTTTGCTAACTTAAAAGTGGGAGAAGAAATAAAGGTAGGTAAGGATAGTTCAAACGCTTCGAAGAACTGTCTCAATGGAAGAAAGGTTTCTCCCTACTTTCAGAATGCATATCGTGAAAAGAAGAAGAGTACAATAGGTTCAAAAAGACAGAAACCTTGTCTCTCTGCTTCCCAGAAAAGAGACGAGGCATATTTAAGGAGGAGTGAAGATAACATGTGGGTACCTCCTCGATCCCATTTTAATCTCCTCCAAGAAAACCATGCTCATGATCCTTGGAGGGTGTTGGTTATTTGCATGCTTTTGAATTGCACCACCGGTGTGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTANGAGAGTGGTAGACGAGTTTTTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E202047" ref_strand="+" ref_description="SGN-E202047 [cLEC-7-P21]">
      <seq>agaatcagatcaatgagaagatgattgaacagaaagcacgagtggtgtccccttactttttgaactcaaggaatggagaaactgaaggttgtggactgaaagctggtaaaactgtgttcgagccttgcttatctcaaaatcagatcaatgagaagatgattgaacagaaagcacgagcggtttgcccttactttttgaactcaaggaatggagaaactgaaatgaaaaaaggcaggtctgtagaatgtgtgaagaaaagaaatgataaaaaattacgaaccaaagttcgagtggtttccccttactttgctaacttaaaagtgggagaagaaataaaggtaggtaaggatagttcaaacgcttcgaagaactgtctcaatggaagaaaggtttctccctactttcaaaatgcatatcgtgaaaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="64652" stop="63627"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64352" g_stop="63927" g_length="426"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="426" r_length="426" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E202047" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>426</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64352" e_stop="63927"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATCAGATCAATGAGAAGATGATTGAACAGAAAGCACGAGTGGTTTCCCCTTACTTTTTGAACTCAAGGAATGGAGAAACTGAAGGTTGTGGACTGAAAGCTGGTAAAACTGTGTTCGAGCCTTGCTTATCTCAAAATCAGATCAATGAGAAGATGATTGAACAGAAAGCACGAGCGGTTTGCCCTTACTTTTTGAACTCAAGGAATGGAGAAACTGAAATGAAAAAAGGCAGGTCTGTAGAATGTGTGAAGAAAAGAAATGATAAAAAATTACGAACCAAAGTTCGAGTGGTTTCCCCTTACTTTGCTAACTTAAAAGTGGGAGAAGAAATAAAGGTAGGTAAGGATAGTTCAAACGCTTCGAAGAACTGTCTCAATGGAAGAAAGGTTTCTCCCTACTTTCAGAATGCATATCGTGAAAAGA</genome_strand>
        <mrna_strand>AGAATCAGATCAATGAGAAGATGATTGAACAGAAAGCACGAGTGGTGTCCCCTTACTTTTTGAACTCAAGGAATGGAGAAACTGAAGGTTGTGGACTGAAAGCTGGTAAAACTGTGTTCGAGCCTTGCTTATCTCAAAATCAGATCAATGAGAAGATGATTGAACAGAAAGCACGAGCGGTTTGCCCTTACTTTTTGAACTCAAGGAATGGAGAAACTGAAATGAAAAAAGGCAGGTCTGTAGAATGTGTGAAGAAAAGAAATGATAAAAAATTACGAACCAAAGTTCGAGTGGTTTCCCCTTACTTTGCTAACTTAAAAGTGGGAGAAGAAATAAAGGTAGGTAAGGATAGTTCAAACGCTTCGAAGAACTGTCTCAATGGAAGAAAGGTTTCTCCCTACTTTCAAAATGCATATCGTGAAAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E313053" ref_strand="+" ref_description="SGN-E313053 [cTOA-14-O9]">
      <seq>aagcacgagcggtttgcccttactttttgaactcaaggaatggagaaactgaaatgaaaaaaggcaggtctgtagaatgtgtgaagaaaagaaatgataaaaaattacgaaccaaagttcgagtggtttccccttactttgctaacttaaaagtgggagaagaaataaaggtaggtaaggatagttcaaacgcttcgaagaactgtctcaatggaagaaaggtttctccctactttcagaatgcata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="64484" stop="63638"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64184" g_stop="63938" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="247" r_length="247" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E313053" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>247</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E313053" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64184" e_stop="63938"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCACGAGCGGTTTGCCCTTACTTTTTGAACTCAAGGAATGGAGAAACTGAAATGAAAAAAGGCAGGTCTGTAGAATGTGTGAAGAAAAGAAATGATAAAAAATTACGAACCAAAGTTCGAGTGGTTTCCCCTTACTTTGCTAACTTAAAAGTGGGAGAAGAAATAAAGGTAGGTAAGGATAGTTCAAACGCTTCGAAGAACTGTCTCAATGGAAGAAAGGTTTCTCCCTACTTTCAGAATGCATA</genome_strand>
        <mrna_strand>AAGCACGAGCGGTTTGCCCTTACTTTTTGAACTCAAGGAATGGAGAAACTGAAATGAAAAAAGGCAGGTCTGTAGAATGTGTGAAGAAAAGAAATGATAAAAAATTACGAACCAAAGTTCGAGTGGTTTCCCCTTACTTTGCTAACTTAAAAGTGGGAGAAGAAATAAAGGTAGGTAAGGATAGTTCAAACGCTTCGAAGAACTGTCTCAATGGAAGAAAGGTTTCTCCCTACTTTCAGAATGCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E318016" ref_strand="+" ref_description="SGN-E318016 [cTOA-30-F2]">
      <seq>ggttttgcaaaaggaatcagcgcctctccgttttcatactgccctaatcgtttgtactgatacgatatcacaacaattttgttggagctagcttctctttctcttctcttcaaggatgcaagtatggatgggaggcaggataataaaggaaagaagagaaggaagaagcacagggagaaatattatgaagaggaaggaaaaattgtgaaatcttccccgtattttaagaaagtgcctgaccatgaggatattggaagtagtaaatccattgaagctttttctgatttgtatatgaagcctatcaagagtgagtgcatggttactgttgaaacacatcagatgagtaacaaaaggaagagaaaaaagaattctgaacgtgttgatgacgagaaatcaggaaatgataacagagaaatggatgccgaaccagtcttgattggtcctcctgttacaatttggaagttattaatgagaaggagaataaacaatttggtgatttagatgagggatgttctagtgttgcttcaatttcagttgttcgtggtgataatgcagtggccattagtcttgatgatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="66985" stop="64286"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66685" g_stop="66572" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66571" i_stop="65050" i_length="1522">
            <donor d_prob="0.909" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65049" g_stop="64586" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="577" r_length="463" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E318016" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318016" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66685" e_stop="66572"/>
          <exon e_start="65049" e_stop="64586"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTTTGCAAAAGGAATCAGCGCCTCTCCGTTTTCATACTGCCCTAATCGTTTGTACTGATACGATATCACAACAATTTTGTTGGAGCTAGCTTCTCTTTCTCTTCTCTTCAAGGTTATTTTACCGGAACACCTAATTTCGCCTAATTCTATGTTTAGCAGTCAGGGTTTCTTATTCATTTTCAATTTCTCTTAATCTCCCTTATCATTGTTGCCCATTGCCTTGCGATGAACCAGTTGGAATTTTTAGGTTAACTGAATACTTTGATATGTTTTCTCCATAATTCTGCTCAACGTTCTAATTTTACATGGGTTTTAATGATTTTGTCTTCTTGTATTCATACCTCCACGATGCACAGTAAATTTTCCTCTTGTGGGTTAACAATTTTTTTCTATTTAAATTCAGGATAGAAATAATTTCGTAAACTGGTTGTATTTTAGTGATTTTTCGCCCAAGAAAAGGCAGTGTTATGCCCTAATAAGCGTCAGTTTATATGGAGTTTGTGTTCTATTTAATGTAATAATACCTAAACAACTTGAAAGTTCCTTGAAACATACACAACTACTAACTCTTCTAAAATAGTTGTAACTACTAAGATTTTTTTTCTAGTTCGTTGAATCTTCATGACTGTATTTCTTCGTTCTAGTCATTGTCCATGCTAACTACCACTAGTTCGTTGTATGGTCATGTAAAATAATCAATTTGTGCTACAATTCTCTTTGAAAAATCAACTTGCCCATCACTACTTGATTTGTTTTAAATTATAGATTTTAGATTTAATTTGTTATTCTGTGATTAATTGTCTTTAACCTACTCTCTGAGTTGATTATCTCAAACTTCTCTTTCGTTCATCAACTTAGACTCAAATGAGTATTGGAGCATGTCGCACATCATGCACTGCAGCCCCTAGTTTAGCTAGTAATCCTAGGGACAATGTATAACTTGTTTATTGTAGCTAGGTTTCTTAGTAAGTATAACCGGTGTTGATATATGTGTATATCTGCTATATTCTTTGTTTTCCTTAATAACCAACACACACACACATATATATATAGAATTCCCTTCTATCGGCTCATGCTTGTGTCTGTTGTGCAACATTAAGCAGTCATACTGTTTCAGATCTATCTAAAACTCAAGGGGAAGCTCTAAGTTCACAGTTCCCTTTCTATAGAAAAAGTGATTTTTATACCTTCGTGAAGTGGGCTGAATATGATAGTTTAACTTCAATCTCGTGCTTCAACTTATTTGTATTGTACAGTTCAGCATCTAGAAGACATGAACTCTATTCCCTTTGGAATAAAATCAAGCTCTTTTTTAGATCCATATTTCTCAAGGATCAAAGAAATTGATAGCACATTCAAGTTGATTTCCATTCAGATTTAGCTGTCTTTCCATGCACTTGTGCTTCCAAACTCTAAAGCTTGTTGGCAATCTGTGTGCAGATACTTCTAGAGACTTGTAATTCACTATTTAACTTTGCCAAGCTTTTCTCAACATAATTATTCCTCTTCCATTTTAAAAAGGCATTCTGTTAGCAGTTCATTCTCTTTATGGCACATCATCAAGGTCAATGCCAATGACAATTCAGAGATGTGATAATGTTTCTATTGTAACAAAAGTTGGTCATGATATGCAGGATGCAAGTATGGATGGGAGGCAGGATAATAAAGGAAAGAAGAGAAGGAAGAAGCACAGGGAGAAATATTATGAAGAGGAAGGAAAAATTGTGAAATCTTCCCCGTATTTTAAGAAAGTGCCTGACCATGAGGATATTGGAAGTAGTAAATCCATTGAAGCTTTTTCTGATTTGTATATGAAGCCTATCAAGAGTGAGTGCATGGTTACTGTTGAAACACATCAGATGAGTAACAAAAGGAAGAGAAAAAAGAATTCTGAACGTGTTGATGACGAGAAATCAGGAAATGATAACAGAGAAATGGATGCCGAACCAGTCTTGATTGGTCCTCCTGTTACAAATTTGGAAGTTATTAATGAGAAGGAGAATAAACAATTTGGTGATTTAGATGAGGGATGTTCTAGTGTTGCTTCAATTTCAGTTGTTCGTGGTGATAATGCAGTGGCCATTAGTCTTGATGATCT</genome_strand>
        <mrna_strand>GGTTTTGCAAAAGGAATCAGCGCCTCTCCGTTTTCATACTGCCCTAATCGTTTGTACTGATACGATATCACAACAATTTTGTTGGAGCTAGCTTCTCTTTCTCTTCTCTTCAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCAAGTATGGATGGGAGGCAGGATAATAAAGGAAAGAAGAGAAGGAAGAAGCACAGGGAGAAATATTATGAAGAGGAAGGAAAAATTGTGAAATCTTCCCCGTATTTTAAGAAAGTGCCTGACCATGAGGATATTGGAAGTAGTAAATCCATTGAAGCTTTTTCTGATTTGTATATGAAGCCTATCAAGAGTGAGTGCATGGTTACTGTTGAAACACATCAGATGAGTAACAAAAGGAAGAGAAAAAAGAATTCTGAACGTGTTGATGACGAGAAATCAGGAAATGATAACAGAGAAATGGATGCCGAACCAGTCTTGATTGGTCCTCCTGTTAC-AATTTGGAAGTTATTAATGAGAAGGAGAATAAACAATTTGGTGATTTAGATGAGGGATGTTCTAGTGTTGCTTCAATTTCAGTTGTTCGTGGTGATAATGCAGTGGCCATTAGTCTTGATGATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E246710" ref_strand="+" ref_description="SGN-E246710 [cLEF-45-O22]">
      <seq>cacaaaccgacatatagatttaggggatcggagtgtcacgtaccgacacaagaggattaatgaatattgagggagcggagtgtcacgtaccgacacaagagaaataaagataatgaatcttgaaagatgttaatatactcaatctaatgaacatgattcccaaatgagtatggtattgaggcttgagtcctcatgtgtgaacttgacggtaattgttaatgatatagtatttgttgttgctacatgttgagtatcatagttgattttatgatattacttggtatatatattgatttctattttgagttggccgatgatatctactcagtacccgtgttttgtactgacccctacttttatgttctcttcttgtttatttgtggagtgcagcaaacgtgccatcgtgttcaactcaacagtaattcaagccagtcttactacatcggaaattcagggtgagctaatgcttctagcttggact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="95129" stop="93946"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94864" g_stop="94834" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="0.935"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94833" i_stop="94693" i_length="141">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94692" g_stop="94246" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="481" r_length="450" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E246710" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94864" e_stop="94834"/>
          <exon e_start="94692" e_stop="94246"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACGAACCGACACATAGATTTAGGGGATCGGGTGTCACAAATCGACACGTAGATTTAGGGGATCGGATGTCACGAACCGACACGTAGATTTAGAGAATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCAGAGTGTCACGTTTCGACACATAGTAGTAGGGGATCAGAGTGTCATGTACCGACACAAGAGGATTAATGAATA-TGAGGGAGTGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATTTTAATATACTCAATCTAATTAACATAATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTACTTGTTGTTGCTACATGTTGAGTATCATAGTTAATTTTATGATATTACTTGG--TATATATTGATTCCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCATGTTTTGTACTGACCCCTACTTTTATGTTTTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCTAGCCAGTCTTCGTTACTCCGGATATCAGGGTGAGCTAATGCTTCTAGCTCGGACT</genome_strand>
        <mrna_strand>CACAAACCGACATATAGATTTAGGGGATCGG.............................................................................................................................................AGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGTTGCTACATGTTGAGTATCATAGTTGATTTTATGATATTACTTGGTATATATATTGATTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTCTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCATCGTGTTCAACTCAACAGTAATTCAAGCCAGTCTTACTACATCGGAAATTCAGGGTGAGCTAATGCTTCTAGCTTGGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E391780" ref_strand="+" ref_description="SGN-E391780 [TUS-24-O2]">
      <seq>tcacaaaccgacatatagatttaggggatcggagtgtcacgtaccgacacaagaggattaatgaatattgagggagcggagtgtcacgtaccgacacaagagaaataaagataatgaatcttgaaagatgttaatatactcaatctaatgaacatgattcccaaatgagtatggtattgaggcttgagtcctcatgtgtgaacttgacggtaattgttaatgatatagtatttgttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="95130" stop="94189"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94865" g_stop="94834" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94833" i_stop="94693" i_length="141">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94692" g_stop="94487" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="239" r_length="207" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E391780" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>238</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E391780" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94865" e_stop="94834"/>
          <exon e_start="94692" e_stop="94487"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACGAACCGACACATAGATTTAGGGGATCGGGTGTCACAAATCGACACGTAGATTTAGGGGATCGGATGTCACGAACCGACACGTAGATTTAGAGAATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCAGAGTGTCACGTTTCGACACATAGTAGTAGGGGATCAGAGTGTCATGTACCGACACAAGAGGATTAATGAATA-TGAGGGAGTGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATTTTAATATACTCAATCTAATTAACATAATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTACTTGTTGTT</genome_strand>
        <mrna_strand>TCACAAACCGACATATAGATTTAGGGGATCGG.............................................................................................................................................AGTGTCACGTACCGACACAAGAGGATTAATGAATATTGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAATGAACATGATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTATTTGTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E349726" ref_strand="+" ref_description="SGN-E349726 [cTOS-3-C5]">
      <seq>tagtcttcggtggaggtaggttattgtttctcttacgatattcgtagtaaactcttaatagagaatgatatgtattgataatattgtaaaccctgctatgtgcttaattgtatgcttgcatgaatgtaactatataattgttattatataagcatgatgaagttattgaatcccaaatcttgtaaaaacctaatctctttttaatgatgatgccttggtaagggagaaggcttgatgaactaaagtaatgagattgatgatgccttggtaagggagaaggcttgatgaattgatagaatgagattaggggatcgggtgtcacgaactgacacgtagaattaggggatcgggtgtcacaaaccgacacgtagattaagggatcaggtgtcacgaaccaacacatagattaggggatcgggtgtcacgaaccgacacgtagatttaggggatcgggtgtcacgaaccgacacgtagatttaggggatcgggtgtcacgaaccgacacgtagatttaggggatcaggtgtcacgaaccgacacgtagatttaggggatcggagtgtcacgttccgacacgtagatttaggggatcagagtatcacgtaccgacacaagaagattaatgaatatganggagcggaatgtcacgtaccgacacaagagaaataaagacaatgaatcttgaaagatgttatatactcaatctaatgaacataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="102691" stop="94269"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102391" g_stop="101980" g_length="412"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="410" r_length="410" r_score="0.937"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101979" i_stop="94877" i_length="7103">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94876" g_stop="94569" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="717" r_length="307" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E349726" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349726" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102391" e_stop="101980"/>
          <exon e_start="94876" e_stop="94569"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCTTCGGTGGAGGTAGGTTATGGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGTGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTATATGCTTGCATGAATGTAATTATATAATTGTGATTATATAAGCATGATGAAGTTATTGAATCCCAAATCTTGCAAAACCCTAATCTCTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCGTGATGAACTAAAATAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTGATAGAAGGAGATTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACATAGATTTAGGTGATCGGGTGTCATGAATCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACATAGATTTAGGGGATCGGGTGTCACGAACCAACACGTAGATTTTGGAGATCAGGTGTCACGAACTGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGAGTGTCACGTTCCGACACATAGTAGTAGGGGATCGGAGTGTTACGTACCGACACAAGAGGATTAATTAATATGAGGGAGCGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATGTTAATATACTCAATCTAAAGAACATAATTCCTAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACAAGAATTGTTAATGATATAGTACTTGTTGTTGCTACATGTTGAGTATCGTAGTTGATTTTATGATATTACTTGGTATATATTGATTCCTATTTTGAGTTGGCCGATGTTATCTACTGAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTCTTCTTCTTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCTAGCCAGTCTTCATTACTCCGGATATCAGGGTGAGCTAATGCTTCTAGCTCGGACTGGATCTTCCTCTTCATGTCTTGATGCCTTGAAGTTCTGGCATGGACTAGCTTTTATGTATTTTTAGCTTCTTAGAAACTCTTAGATTTATTAATTTGAAGTAGATGTTCTTGTGATGATGACTTCCAGATTTTGGGAAATAATAGTTATTGAATTGGTTTTTATTAATGAGTTTAAGTCTTCCGCATTACTTTATGTTGATATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCACTCACATAGGAGGGTAAGTGTGGGTGCCGGTTGTGGCTCGGTTTTGGGGTCGTGACAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATAACACAAGAACGAGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAATTCCATTGCTATTACTTGGATCCAATTGGTATCTAGGTGATACAAATTGGTATCTGACCATCTTCACTCTATTTCGCAGATGGTTAGAACTAGAGCAACAACCGCGCCAACACCAGCACCGGCGGGACAGGGTGCGTCTAAACCAGCCACTTGGGCTGTAGCTAGAGGAAGAGTAGCGGCAAGAGGCCGTGGAAGAGGTCGTGGGAGGACGTCCTCTAGAGGAAGAGGACAAGCACCTAGCCCATCTGATGCCAGGGCGGTGACTCCTCCACCGACTGAGGAAGTAGTAAGAGAGGGTGAGGAAGGGGAGAATGAACAAGTGCAAAATGAGGAATTTCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCACTTATCTTAGTGGGTTGTCTGATTAGGGTCAGGCACCTCCAATGTTTTCTGCACCAACACCTCCGGTTTCAGAGTTACAACATGCAGCCACTATGGCTCCTCGTATGGATGCCTCATTGGACATAGGCGCGTTTCCACGTCTGACTACTGGGCCTATAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGTGGATGCTTACGATTTTCTGGTTGGCTGTCATGAGCTAATACACAAGATGGGTATAGTAGAATGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCCTCATTCTCTAACTTGTTTATGGAGAAGTATATCCCCCGGACTTTGAGGGATAGGAAAAGGGATGAGTTCTTGAGCCTAGAGCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAAGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACGGCAAAATCCTTCCAAGAAGTGGTAGATTTCGTGGTAGAGGTGGAAGGAGTGAAGCCAGATGAATTCACCATGACATCGTCAGCAAAGAGGTTTCGAAAGGGAGGTGAGTTTAATGGTTCTTACTCCAGAGGACAGGGTTCCGGAGGTTACTCAGTTCAACCCATTCAGTCTTCACTACAGACTGTAGTTGGGGGTCCACCTCAAACCGGTCAACACTTCTCTGAGAGACCTATGCTTGACTCTAGAGAGTGTTATGGATGTGGGGAGACTGGACATATTAGGAGGAATTGTCCCAAACAGAGTTATAGACTCCCAATAGCTAGAGGTAGAGGTGGTCATGGTAGAGGCCGTTATTCTGGAGGACGTAGTGGTCGAGGTAATGGTGGTCACCAAAACAGCCGGGGTGATGGGAAAACTGGAGCCACTACACCACAACATGGTAGGGGCAACGGACAAATAAACGAAAGGGCCCATTGTTATGCTTTCCCTGGGAGATCGGAGGCGGAGACATCTGATGCTGTCATCACAGGTAATCTTCTGGTTTGTGATTGCATGGCTTCTGTATTGTTTGATCCTGGATCCACATTTTCTTATGTATCTTCCTCATTTGCTAATGGTCTAAATTTACATTGTGAATTACTTGATATGCCTATTCGTGTTTCTACTCCGGTGGGTGGATCTGTGGTAGTTGAAAAGGTATATAGGTCTTGTTTGGTGAACTTTGTGGGGAGCAACACTTATGTAGATTTGGTTATCTTAGAAATGGTTGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCGATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTAGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTACTTTCTTCATGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTGGTCCATGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATTGATCTTGAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAGCAAGGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTGTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGGATGTGCATAGACTACCGGCAGTTGAACAAGGTAACCATAAAGAACAAGTATCCTCTTCCTCGCATTGATGACTTGTTCGATCAGTTACAAGGTGCTTGTGTCTTCTCTAAGATTGACTTGAGATCCGGTTATCATCAATTGAAAATACGGGCAACGAATGTGCCAAAAACTGCTTTTCGAAGCAGGTATGGGCATTACGAATTTGTAGTGATGTCTTTTGGTCTTACGAATGCCCCTGCTGCGTTCATGAGCTTGATGAACGGGATTTTTAAGCCATATTTTGATCTCTTTCTGATCGTGTTTATTGATGATATACTGATATACTCTAAAAGTAAGAAGGAACATGAGGAGCATTTGAGAATTGTATTGGAAATGTTGAGGGAGAAAAAGCTTTATGCCAAGTTCTCTAAGTGTGAGTTTTGGCTAGATGCAGTGTCCTTCTTGGAGCACGTGGTTTCTAAGGATGGAGTGATGGTGGATCCTTCTAAGATTGAGACAGTGAAGAATTGTGTAAGACCTACTAATGTGTCAGAAATAAGGAGCTTTGTTGGGTTAGCTAGCTACTATCGCCGATTTGTCAAGGGATTCTCTTCTACTGCTTCCCAACTGACGAACTTGACTAAGCAAAATGTTCCATTTGTATGGTCGGATGAGTGTGAGGAAAGATTTCAGAAGCTCAAGACTTTGTTGACTACCGCACCCATTCTCACCTTGCCCGTAGAGAGTAAGAACTTCATTGTTTATTGTGATGCATCCTATTATGGTTTGGGTGCAGTACTAATGCAAGAGAAGAATGTGATTGCTTATGCTTCGAGGTAATTAAAAGTGCATGAACGTAACTATCCAACTCATGATTTGGAATTGGCTGCGGTTGCATTAAAGCAATGGAGACACTATTTATATGGGGTTAAGTGTGAGGTCTACACGGATCATCGTAGCCTTCAGTATGTCTTTACTCAGAAAGATTTGAACTTGAGACAGAGGAGATGGATGGAGCTACTAAAGGACTACGATATCACTATCTTGTATCATCCGGGGAAGGCGAATGTTGTAGCGGATGCTTTAAGTAGAAAGGCAGGAAGCATGGGAAGTCTAGCTCACTTGCAAGCTTCTAGACGCCCATTGGCTAGAGAAGTTCAGATTCTGGCTAACGACCTTATGAGATTAGAAGTAAATGAGAAGGGAGGATTTTTATCTTGTGTGGAGGCAAGATCTTCCTTCCTTGACAAGATTAAGGGAAAGCAGTTTAATGATGAAAAATTGATCGGATCAGAGATAAAGTGTTGCAAGGAGAGGCTAAAGAAGCGACAATCAATGAGGAAGGTGTTTTGAGGATTAAGGGAAGGGTATGTGTACCCCGCGTCGATGATTTGATCAACACTATTCTGACAGAGGCTCATAGTTCAAGGTATTCGATACATCCCGGGTGCAACCAAGATGTACCGTAACCTAAAGCAACACTTTTGGTGGAGTAGAATGAAGCGTGATATTGTGGATTTTATTGCCAAATGTCCAAACTGTCAACAAGTAAAGTATGAACACCAAAGGCCCGGAGGAACACTTCAGAGAATGCCCATTCCTGATGGAAGTGGGAAAGGATTGCAATGGATTTCGTGGTGGTCTTCCAAAGACATTGGAAAAGTTTGATTCCATTTGGGTAATTGTTGATAGGTTAACTAAGTCTGCTCACTTCATTCCGGTCAAGGTGACTTACAATGCAGAGAAGTTAGCCAAACTTTACATCTCAGAAGTGGTGCGATTGCATGGGGTTCCACTCTCCATTATATCAGATAGAGGTACGCAATTTACTTCTAAGTTTTGGAAAACATTGCATGCGGAATTGGGTACTAGGTTGGACCTTAGTACGGCGTTCCATCCTCAGAATGATGGTCAGTCTGAGCGAACGATTCAAGTGTTGGAGGATATGCTTCGTGCATTGTGATAGAATTTGGTGGTCATTGGGATATCTTCTTACCCTTAGCAGAGTTCTCCTACAACAATAGCTATCACTCAAGCATTGATATGGCCCCATTTGAGGCACTATATGGGAGAAGATGTAGGTCTCCCATTGGGTGGTTTGATGCATTTGAGGTTAGACCTTGGGGTACTGACCTTCTGAGAGAATCATTAGATAAAGTGAAATCTATTCAAGAAAAGCTTCTAGCGGCGCAAAGTAGGCAAAAAGAATACGTGGATCGAAAGGTTAGAGACTTAGAGTTCATGGAGGGTGAACAAGTCTTGCTGAAGGTTTCGCCAATGAAAGGGGTGATGCGGTTTGGAAAAAGGGGTAAACTAAGCCCAAGGTATATTGGTCCCTTCGAGGTTCTGAAGCGCATAGGGTAGGTGGCTTATGAGTTAGCCTTGCCTCCAGGGCTGTCCGGAGTGCATCCGGTATTCCATGTGTCTATGTTGAAAAGATACCATGGGGATGGAAACTAAATTATCCGTTGGGATTCAGTTTTGCTTGATGAGAATTTGTCTTATGAGGAGGAACCTTTTGCCATTCTAGATAGAGAAATTCGCAAGTTGAGATCAAGGGAGATTGCATCCATCAAAGTTCAATGGAAGAATCGACCCGTTGAAGAAGCCACTTGGGAGAAGGAGGCAGATATGCGAGAAAGATACCCACATCTGTTTACAGATTCAGGTACTCCTTTTCGCCCTTGTTTTCCTTCTTGTGATCGTTCGGGGACGAATGATGGGTAAATTGGTATCTATTGTAACGACCTGTTTAGTCGTTTTTGAGCAGTAGATTTTATTTCTGGAAAAACAGGCTGATGCGACGGACCCCACGATGGACCGTCATGGGCACGACGGACCATCATAGGCACGACGGACCATCGCAGGGTCTCGTTTCAAAAGACTTAGAAAAACTAAAAATTGGGTACTGAAATTGACTCTCTGAACTTCGTAACGGAATGGCAGGACGGACCGTCACAGGTGTGACGGACCGTCACAGACTCTTCAGAGAAATTGAGTCTCTAAAGTCTGCGACGGAGCAGCAGGACGGACCGTCGCAGGCGCGACGGGCCGTCGCAGACTGCGTAATCCCAGTCTGGGTCAGATTTCTTTATACGTTTTAAGGGACGTTTTTGACTATTCCTGCTTTAATTATAAAGTTAGTGGGTTAATGTTAATAAGTCTAATTACTTGGGGGTTAAAAGAGCTAACCTTAAGTTAATTAGTGGGTTATTATTGCCATCTTTTATTCTTAATGATATGATAATTAGGGTAAAAGAAAGAGGGTTTGAATAAAGAAAATGGAAAGAACAAAGAGAGAGAGGGGATTGATCGAGAGAGGAGAAACGAAGAGGAAAACACAAAGCTTTGGGAATTTGCTTGCTTGATCACTAATCTTCGGTGGAGGTAGGTTATGGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGAGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTGTATGCTTGCATGAATGTAATTATATAATTGTGATTATATAAGCATGATGAAGTTATTGAATCCCAAATCTTGCAAAACCCTAATCTCTTGTTAATGATGATGCCTGTGTATAAAAGAAGGCGTGATGAACTAAAATAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTGATAGAAGGAGATTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACATAGATTTAGGGGATCGGGTGTCACAAATCGACACGTAGATTTAGGGGATCGGATGTCACGAACCGACACGTAGATTTAGAGAATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCAGAGTGTCACGTTTCGACACATAGTAGTAGGGGATCAGAGTGTCATGTACCGACACAAGAGGATTAATGAATATGAGGGAGTGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATTTTAATATACTCAATCTAATTAACATAA</genome_strand>
        <mrna_strand>TAGTCTTCGGTGGAGGTAGGTTATTGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGAGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTGTATGCTTGCATGAATGTAACTATATAATTGTTATTATATAAGCATGATGAAGTTATTGAATCCCAAATCTTGTAAAAACCTAATCTCTTTTTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAATTGATAGAATGAGATTAGGGGATCGGGTGTCACGAACTGACACGTAGAATTAGGGGATCGGGTGTCACAAACCGACACGTAGA-TTAAGGGATCAGGTGTCACGAACCAACACATAGA-TTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCAGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGAGTGTCACGTTCCGACACGTAGATTTAGGGGATCAGAGTATCACGTACCGACACAAGAAGATTAATGAATATGANGGAGCGGAATGTCACGTACCGACACAAGAGAAATAAAGACAATGAATCTTGAAAGATGTT-ATATACTCAATCTAATGAACATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E357559" ref_strand="+" ref_description="SGN-E357559 [cTOS-23-F2]">
      <seq>tagtcttcggtggaggtaggttattgtttctcttacgatattcgtagtaaactcttaatagagaatgatatgtattgataatattgtaaaccctgctatgtgcttaattgtatgcttgcatgaatgtaactatataattgttattatataagcatgatgaagttattgaatcccaaatcttgtaaaaacctaatctctttttaatgatgatgccttggtaagggagaaggcttgatgaactaaagtaatgagattgatgatgccttggtaagggagaaggcttgatgaattgatagaatgagattaggggatcgggtgtcacgaactgacacgtagaattaggggatcgggtgtcacaaaccgacacgtagattaagggatcaggtgtcacgaaccaacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="95553" stop="94551"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95253" g_stop="94851" g_length="403"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="402" r_length="402" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E357559" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>403</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E357559" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95253" e_stop="94851"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCTTCGGTGGAGGTAGGTTATGGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGAGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTGTATGCTTGCATGAATGTAATTATATAATTGTGATTATATAAGCATGATGAAGTTATTGAATCCCAAATCTTGCAAAACCCTAATCTCTTGTTAATGATGATGCCTGTGTATAAAAGAAGGCGTGATGAACTAAAATAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTGATAGAAGGAGATTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACA</genome_strand>
        <mrna_strand>TAGTCTTCGGTGGAGGTAGGTTATTGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGAGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTGTATGCTTGCATGAATGTAACTATATAATTGTTATTATATAAGCATGATGAAGTTATTGAATCCCAAATCTTGTAAAAACCTAATCTCTTTTTAATGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAACTAAAGTAATGAGATTGATGATGCCTTGGTAAGGGAGAAGGCTTGATGAATTGATAGAATGAGATTAGGGGATCGGGTGTCACGAACTGACACGTAGAATTAGGGGATCGGGTGTCACAAACCGACACGTAGA-TTAAGGGATCAGGTGTCACGAACCAACACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E379315" ref_strand="+" ref_description="SGN-E379315 [TUS-1-J2]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttncactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="97717" stop="99029"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98017" g_stop="98729" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E379315" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E379315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98017" e_stop="98729"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGATAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACACAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCTCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAACACGATCAGAAAGAGATCAAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGCTTCGAAAAGCAGTTTTTGGCACATTCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAACACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCCTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTNCACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTGCTC-ACAACTCTTTGAAGTGGTCTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E375319" ref_strand="+" ref_description="SGN-E375319 [TUS-15-F18]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="97717" stop="98912"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98017" g_stop="98612" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E375319" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98017" e_stop="98612"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGATAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACACAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCTCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAACACGATCAGAAAGAGATCAAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGCTTCGAAAAGCAGTTTTTGGCACATTCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAAC</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E204434" ref_strand="+" ref_description="SGN-E204434 [cLEC-13-J16]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="97717" stop="98842"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98017" g_stop="98542" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E204434" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E204434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98017" e_stop="98542"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGGCGATAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACACAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCTCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAACACGATCAGAAAGAGATCAAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGCTTCGAAAAGCAGTTTTTGGCACATTCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E368762" ref_strand="+" ref_description="SGN-E368762 [TUS-22-P2]">
      <seq>gtctcacccaattcttcactgtctcaatcttacaaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagagtatatcagtatatcatcaataaacatgatgacaaagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagagaagacacaagcaccttgtaactgatcgaacaagtcatcaatgcgaggaagtggatacttgttcttaatagttaccttgttcaactgccggtagtctatgcacatccgaaaactcccatccttcttcttcacaaaccaaaccggagcaccccaaggagatgcacttggtctaatgaagactttgctcaaaaactcttgaagttgggcctttaactctcttaactccgcgggagccattctataagggggtatagaaatggggcgagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="97788" stop="99066"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98088" g_stop="98767" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="679" r_length="679" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E368762" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E368762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98088" e_stop="98767"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACACAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCTCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAACACGATCAGAAAGAGATCAAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGCTTCGAAAAGCAGTTTTTGGCACATTCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAACACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCCTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTA</genome_strand>
        <mrna_strand>GTCTCACCCAATTCTTCACTGTCTCAATCTTACAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGTATATCAGTATATCATCAATAAACATGATGACAAAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGTGGATACTTGTTCTTAATAGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACCAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACTTTGCTCAAAAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E240817" ref_strand="+" ref_description="SGN-E240817 [cLED-24-J5]">
      <seq>gtctcacccatttcttcactgtctcaatcttaccaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagaggatatcagtatatcatcaatgaacatgatgacgcagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="97788" stop="98746"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98088" g_stop="98446" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E240817" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>359</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E240817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98088" e_stop="98446"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACACAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCTCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAACACGATCAGAAAGAGATCAAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGCTTCGAAAAGCAGTTTTTGGCACA</genome_strand>
        <mrna_strand>GTCTCACCCATTTCTTCACTGTCTCAATCTTACCAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGGATATCAGTATATCATCAATGAACATGATGACGCAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E355232" ref_strand="+" ref_description="SGN-E355232 [cTOS-18-A6]">
      <seq>tcaatgcgaggaagaggatacttgttcttaatagttaccttgttcagttgtctgtagtctatgcacattctaaaacttccatccttcttcttcacaaataaaactggagcaccccaaggagatgcacttggtctaatgaagaccttgctcaacaactcttgaagttgagcctttaactctcttaattcggcgggagccattctataagggggtatagaaatggggcgtgtgcctggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcaggaaacacgtccaaaaactcgcggactaccgaaaccgactcaattgagggtacttgagtagtgtcatccttgagatgtgccaagaaagctgaacaccctttactaaccattttcttagcacgaagaaaggatatgatacgcaccagattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaatttggagaaagccaagtcatacccagaattacatcaatgtcacccatttctaaaaaaccaaatctacataagtgttgctccccacgaaattcnacaaaacagaactatgtaccttttcaactaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="98237" stop="99495"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98537" g_stop="99195" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E355232" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355232" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98537" e_stop="99195"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAACACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCCTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCATGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCATGAAGAAAGTAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCTAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCAC</genome_strand>
        <mrna_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAGTTGTCTGTAGTCTATGCACATTCTAAAACTTCCATCCTTCTTCTTCACAAATAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACCTTGCTCAACAACTCTTGAAGTTGAGCCTTTAACTCTCTTAATTCGGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCTGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGAAACACGTCCAAAAACTCGCGGACTACCGAAACCGACTCAATTGAGGGTACTTGAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTGAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGATATGATACGCACCAGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAATGTCACCCATTTCTAA-AAAACCAAATCTACATAAGTGTTGCTCCCCACGAAATTCNACAAAACAGAACTATGTACCTTTTCAACTACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E353359" ref_strand="-" ref_description="SGN-E353359 [cTOS-15-G18]">
      <seq>gcaaggtaggatgtaggtcaatgcatatgaggctaagtttcgtgcactatccagatatgccactcaactttgtttcagtccacaagagaggattcgtcgttttgtgaaagggttgaggtcagagttgcggatttcagcgttacaggtagcggctacggcaaaatccttgcaagaaatggttgacttcgatgtaattctgggtatgacttggctttctccaaattttgcaatcttggattgtaatgctaaaaccgtgacgttagccaagcctgggacagatctgttagtgtaggagggtgactacacttccaatccggtgcgtatcatctcctttcttcgtgctaagaaaatggttagtaaagggtgtttagctttcttggcacatctcaaggataacactacccaagtaccttcgattgactcagtttcagtagttcgtgagtttatggatgtgttccctgcagatcatcctggtatgccaccggatagggatattgacttctgtattgatctcgaaccgggcacacgccccatttttatacccccttatagaatggctcccgcagagttaagagagttaaaggcacaacttcaagagttattgaacaaaggcttcattagaccaagtgcatctccttggggtgctccggttttgttgtaaagatcggcagtttttgaatgtgcatagactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="100333" stop="98325"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100033" g_stop="99861" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99860" i_stop="99117" i_length="744">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99116" g_stop="98589" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="694" r_length="521" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E353359" ref_strand="-">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353359" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="100033" e_stop="99861"/>
          <exon e_start="99116" e_stop="98589"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAAGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACGGCAAAATCCTTCCAAGAAGTGGTAGATTTCGTGGTAGAGGTGGAAGGAGTGAAGCCAGATGAATTCACCATGACATCGTCAGCAAAGAGGTTTCGAAAGGGAGGTGAGTTTAATGGTTCTTACTCCAGAGGACAGGGTTCCGGAGGTTACTCAGTTCAACCCATTCAGTCTTCACTACAGACTGTAGTTGGGGGTCCACCTCAAACCGGTCAACACTTCTCTGAGAGACCTATGCTTGACTCTAGAGAGTGTTATGGATGTGGGGAGACTGGACATATTAGGAGGAATTGTCCCAAACAGAGTTATAGACTCCCAATAGCTAGAGGTAGAGGTGGTCATGGTAGAGGCCGTTATTCTGGAGGACGTAGTGGTCGAGGTAATGGTGGTCACCAAAACAGCCGGGGTGATGGGAAAACTGGAGCCACTACACCACAACATGGTAGGGGCAACGGACAAATAAACGAAAGGGCCCATTGTTATGCTTTCCCTGGGAGATCGGAGGCGGAGACATCTGATGCTGTCATCACAGGTAATCTTCTGGTTTGTGATTGCATGGCTTCTGTATTGTTTGATCCTGGATCCACATTTTCTTATGTATCTTCCTCATTTGCTAATGGTCTAAATTTACATTGTGAATTACTTGATATGCCTATTCGTGTTTCTACTCCGGTGGGTGGATCTGTGGTAGTTGAAAAGGTATATAGGTCTTGTTTGGTGAACTTTGTGGGGAGCAACACTTATGTAGATTTGGTTATCTTAGAAATGGTTGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCGATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTAGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTACTTTCTTCATGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTGGTCCATGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATTGATCTTGAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAGCAAGGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTGTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGGATGTGCATAGACTACC</genome_strand>
        <mrna_strand>GCAAGGTAGGATGTAGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGAGGATTCGTCGTTTTGTGAAAGGGTTGAGGTCAGAGTTGCGGATTTCAGCGTTACAGGTAGCGGCTACGGCAAAATCCTTGCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACCGTGACGTTAGCCAAGCCTGGGACAGATCTGTTAGTGTAGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATAACACTACCCAAGTACCTTCGATTGACTCAGTTTCAGTAGTTCGTGAGTTTATGGATGTGTTCCCTGCAGATCATCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTTTATACCCCCTTATAGAATGGCTCCCGCAGAGTTAAGAGAGTTAAAGGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTG-TTGT--A-AAG-A--TCGGCAGTTTTTGAATGTGCATAGACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E355244" ref_strand="+" ref_description="SGN-E355244 [cTOS-18-K20]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttagcaaatgaggaagatacantagaaaacgtggatcccaggatcaacaatacagaagccatgcaatcacaatcgaaagattacctgtgatgacagcatctaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="98306" stop="99667"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98606" g_stop="99367" g_length="762"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="761" r_length="761" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E355244" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98606" e_stop="99367"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTTACAAACAACACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCCTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCATGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCATGAAGAAAGTAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCTAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGATCCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGAT-CCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGAT</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAGCAAATGAGGAAGATACANTAGAAAACGTGGATCCCAGGATC-AACAATACAGAAGCCATGCAATCACAATCGA-AAGATTACCTGTGATGACAGCATCTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E351414" ref_strand="+" ref_description="SGN-E351414 [cTOS-12-D7]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="98306" stop="99566"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98606" g_stop="99266" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="661" r_length="661" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E351414" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98606" e_stop="99266"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTTACAAACAACACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCCTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCATGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCATGAAGAAAGTAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCTAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGATCCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAG</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E352716" ref_strand="+" ref_description="SGN-E352716 [cTOS-11-H19]">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="98709" stop="99635"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99009" g_stop="99339" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E352716" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99009" e_stop="99339"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTGTCCTAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGATCCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAG</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E244046" ref_strand="+" ref_description="SGN-E244046 [cLEE-1-H7]">
      <seq>aaacacgaataggcatatcaagtaattcacaatgtaaagttagaccattagcaaatgaggaagatacataagaaaatgtggatccaggatcaaacaatacagaagccatgcaatcacaaaccaaaagattacctgtgatgacaacatcagattcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcattcttatgtctgttgcccctaccatgttgtgatgtagtggctccagtttgcccatcacctcggccgttttggtgaccaccatttcctcgaccgccacgtcctccagaataacggactctgccatgaccacctctacctctaacctttggaggtctgtaactctgttttggacaatatctcttaatatgtccaatctccccacacccatagcactctctgggttcatgcataagtctctcagagaagtgttgaccggtcgaaggtggacccccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagcaccattaaactcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="98916" stop="99972"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99216" g_stop="99774" g_length="559"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="559" r_length="559" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E244046" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99216" e_stop="99774"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGTCTCCGCCTCCGATCTCCCAGGGAAAGCATAACAATGGGCCCTTTCGTTTATTTGTCCGTTGCCCCTACCATGTTGTGGTGTAGTGGCTCCAGTTTTCCCATCACCCCGGCTGTTTTGGTGACCACCATTACCTCGACCACTACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGAGTCTATAACTCTGTTTGGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTAGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTTTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTTGAACTGAGTAACCTCCGGAACCCTGTCCTCTGGAGTAAGAACCATTAAACTCACC</genome_strand>
        <mrna_strand>AAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAACATCAGATTCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCATTCTTATGTCTGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCCGTTTTGGTGACCACCATTTCCTCGACCGCCACGTCCTCCAGAATAACGGACTCTGCCATGACCACCTCTACCTCTAACCTTTGGAGGTCTGTAACTCTGTTTTGGACAATATCTCTTAATATGTCCAATCTCCCCACACCCATAGCACTCTCTGGGTTCATGCATAAGTCTCTCAGAGAAGTGTTGACCGGTCGAAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGCACCATTAAACTCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E356912" ref_strand="+" ref_description="SGN-E356912 [cTOS-22-F17]">
      <seq>caggatcaaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccaggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagccgagtaacctccggaaccttgtcctctagagtaagaacccttaaactcacctccctttcgaaacctctttgatgttgatgtcgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaaggccgaaatccgcaattctgacctcaaccccttcacaaaccggagaatccgctcttgaggactgaaacagagttgagtggcatatccggatagtgcacggaacttagcctcataagcattaaccgacatcctaccttgctctaggctcaggaactcatctcttttcctatccctcaaagtccgggggatatactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="99000" stop="100389"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99300" g_stop="100089" g_length="790"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="790" r_length="790" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E356912" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>790</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356912" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99300" e_stop="100089"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGTCTCCGCCTCCGATCTCCCAGGGAAAGCATAACAATGGGCCCTTTCGTTTATTTGTCCGTTGCCCCTACCATGTTGTGGTGTAGTGGCTCCAGTTTTCCCATCACCCCGGCTGTTTTGGTGACCACCATTACCTCGACCACTACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGAGTCTATAACTCTGTTTGGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTAGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTTTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTTGAACTGAGTAACCTCCGGAACCCTGTCCTCTGGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGCTGACGATGTCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACCACTTCTTGGAAGGATTTTGCCGTAGCCGCTACCTGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCCTTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTT</genome_strand>
        <mrna_strand>CAGGATCAAACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCAGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCCGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTTGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGAGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCCGGATAGTGCACGGAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAGGAACTCATCTCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E353805" ref_strand="+" ref_description="SGN-E353805 [cTOS-10-C24]">
      <seq>ggatcaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccaggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagccgagtaacctccggaaccttgtcctctaaagtaagaacccttaaactcacctccctttcgaaacctctttgatgttgatgtcgtggtgaagtcgtctggcttcactccttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="99002" stop="100135"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99302" g_stop="99835" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="533" r_length="533" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E353805" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353805" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99302" e_stop="99835"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGTCTCCGCCTCCGATCTCCCAGGGAAAGCATAACAATGGGCCCTTTCGTTTATTTGTCCGTTGCCCCTACCATGTTGTGGTGTAGTGGCTCCAGTTTTCCCATCACCCCGGCTGTTTTGGTGACCACCATTACCTCGACCACTACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGAGTCTATAACTCTGTTTGGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTAGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTTTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTTGAACTGAGTAACCTCCGGAACCCTGTCCTCTGGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGCTGACGATGTCATGGTGAATTCATCTGGCTTCACTCCTTCC</genome_strand>
        <mrna_strand>GGATC-AACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCAGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCCGAGTAACCTCCGGAACCTTGTCCTCTAAAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTTGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E356209" ref_strand="+" ref_description="SGN-E356209 [cTOS-20-H15]">
      <seq>ttcagaccgcccagggaaagcgtaacaatgggccctatcgttcgtctgtccgttgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccattttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataactttgtctgggacaatttttcctaatatgtccaatctccccacatccataacattctctggagtcaagcataggcccctcggagaagtgttaaccggtctgaggtggtctcccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagaaccattaaactcacctcccttccgaaacctttttgatgtcgatgttgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctatctgtaaggacgaaatccgcaattctgacctcaaccccttcacaaaccggcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaaccgacatcctaccttgctctaggctcaagaactcatcccttttcctatccctcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="99077" stop="100373"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99376" g_stop="100073" g_length="698"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="698" r_length="698" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E356209" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356209" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99376" e_stop="100073"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCGATCTCCCAGGGAAAGCATAACAATGGGCCCTTTCGTTTATTTGTCCGTTGCCCCTACCATGTTGTGGTGTAGTGGCTCCAGTTTTCCCATCACCCCGGCTGTTTTGGTGACCACCATTACCTCGACCACTACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGAGTCTATAACTCTGTTTGGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTAGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTTTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTTGAACTGAGTAACCTCCGGAACCCTGTCCTCTGGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGCTGACGATGTCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACCACTTCTTGGAAGGATTTTGCCGTAGCCGCTACCTGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCCTTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAG</genome_strand>
        <mrna_strand>TTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTGTCCGTTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTTGTCTGGGACAATTTTTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCAAGCATAGGCCCCTCGGAGAAGTGTTAACCGGTCTGAGGTGGTCTCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGAACCATTAAACTCACCTCCCTTCCGAAACCTTTTTGATGTCGATGTTGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTATCTGTAAGGACGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E356614" ref_strand="+" ref_description="SGN-E356614 [cTOS-21-N3]">
      <seq>gcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtggcatttcctcattttgcacttgntcagtttccccatccctccctttctctattacttcctcagtcagtggaagagtcactgccctagtatcagatgggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="99638" stop="100956"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99937" g_stop="100656" g_length="720"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="720" r_length="720" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E356614" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E356614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99937" e_stop="100656"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAATCCGCTCTTGTGGACTGAAACAAAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGTTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCATTCTACTATACCCATCTTGTGTATTAGCTCATGACAGCCAACCAGAAAATCGTAAGCATCCACAGATTCAGCACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAACGCGCCTATGTCCAATGAGGCATCCATACGAGGAGCCATAGTGGCTGCATGTTGTAACTCTGAAACCGGAGGTGTTGGTGCAGAAAACATTGGAGGTGCCTGACCCTAATCAGACAACCCACTAAGATAAGTGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGAAATTCCTCATTTTGCACTTGTTCATTCTCCCCTTCCTCACCCTCTCT-TACTACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTGGCATCAGATGGGCT</genome_strand>
        <mrna_strand>GCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTTTGCACTTGNTCAGTTTCCCCATCC-CTCCCTTTCTCTATTACTTCCTCAGTCAGTGGAAGAGTCACTGCCCTAGTATCAGATGGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E352401" ref_strand="+" ref_description="SGN-E352401 [cTOS-9-N1]">
      <seq>aatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaactgacaccctaccttgctctaggctcaagaactcatcccttttcttatccctcaaagtccgggggatatacttctccataaacaaactatagaatgaggcccaagtcataggtgatgcctctattggttgacactcgatatgtgaccgccaccacatttgggcgttcccttgaaactgataagtcacaaactccacaccaaaccgttctactatacccatcttgtgtagtagctcgtgacagtcaaccagaaaatcataagcatcctccgattcagcacccttgaagaccggaggtttcaatttcaagaacttactgaaaagttcatgctgatcatttgtcattatagggacagtagtcaaacgtggaaatgtgcctatgtccaatggaacatccatgcggggagccatagtagccgcatgttgtacttctgaaaccggaggtgttggcgcagaaaacactggaggtgcttgaccttgatcagataacccgctaagataagccagaacctgattgatcatctctggggtaggttggggtgccatttccctcatttgcacttgttcagtttccccatcctccccttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="99640" stop="100905"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99940" g_stop="100603" g_length="664"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="664" r_length="664" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E352401" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352401" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99940" e_stop="100603"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCCGCTCTTGTGGACTGAAACAAAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGTTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCATTCTACTATACCCATCTTGTGTATTAGCTCATGACAGCCAACCAGAAAATCGTAAGCATCCACAGATTCAGCACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAACGCGCCTATGTCCAATGAGGCATCCATACGAGGAGCCATAGTGGCTGCATGTTGTAACTCTGAAACCGGAGGTGTTGGTGCAGAAAACATTGGAGGTGCCTGACCCTAATCAGACAACCCACTAAGATAAGTGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGAAATTCCTCATTTTGCACTTGTTCATTCTCCCCTTCCTCACCCTCT</genome_strand>
        <mrna_strand>AATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACTGACACCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCTTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAACTATAGAATGAGGCCCAAGTCATAGGTGATGCCTCTATTGGTTGACACTCGATATGTGACCGCCACCACATTTGGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACCGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGGACAGTAGTCAAACGTGGAAATGTGCCTATGTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACTTCTGAAACCGGAGGTGTTGGCGCAGAAAACACTGGAGGTGCTTGACCTTGATCAGATAACCCGCTAAGATAAGCCAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGCCATTTCCCTCATTTGCACTTGTTCAGTTTCCCCATCCTCCCCTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E329287" ref_strand="+" ref_description="SGN-E329287 [cTOD-2-K13]">
      <seq>acctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="100960" stop="99807"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100660" g_stop="100107" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E329287" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E329287" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100660" e_stop="100107"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTAGCCCATCTGATGCCAGGGCGGTGACTCCTCCACCGACTGAGGAAGTAGTAAGAGAGGGTGAGGAAGGGGAGAATGAACAAGTGCAAAATGAGGAATTTCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCACTTATCTTAGTGGGTTGTCTGATTAGGGTCAGGCACCTCCAATGTTTTCTGCACCAACACCTCCGGTTTCAGAGTTACAACATGCAGCCACTATGGCTCCTCGTATGGATGCCTCATTGGACATAGGCGCGTTTCCACGTCTGACTACTGGGCCTATAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGTGGATGCTTACGATTTTCTGGTTGGCTGTCATGAGCTAATACACAAGATGGGTATAGTAGAATGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCCTCATTCT</genome_strand>
        <mrna_strand>ACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E578039" ref_strand="+" ref_description="SGN-E578039 [LE08DB10]">
      <seq>cgagggtctttgttctaatacacttcaactcttggaatttgggtactgggatcacttctctgaacttcacgacgaacctgcaggacggaccgtcagatccacgacggaccgtcacaagcttcgtaatcccacacttagtcagacttccctatcttccttcagcagctgcactacgcttccacctacggaccgtcacaagcacgacggaccgtcataagctccgtaggtggtttcttctgcatttcttcgctcaaaatctccgcattcagctttggacagatttcctgcaaaacaaagagtaacttatataaaaattagcacaaaaaggcttttggacacactaagcttaaggaaaaagtattaataataccgtgaaaccacggtatatcaacaccctcaacttaaattagttgtttgtcctcaagcgacgcactatgactcactacacaatctttgtacaatagtatccatgttttatcctttgcaatcatttggctatcaatcccgattaatctcatcaaatctatgcatgctatcactattaggtttgaattttgtgggatcagaatatgacacagacttaccatgcactaacacctatcctcttcaatttctcaccgaggtgctaacaattctagtattgcaactagtgtcctcactataagacaaaatcctcctttttcacacagtgattttagtttgagtataaggattac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="116940" stop="118255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117240" g_stop="117955" g_length="716"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="716" r_length="716" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E578039" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E578039" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117240" e_stop="117955"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGGGTCTTCGTTCCAAAACACTTCAACTCTTGGAATCTGGGTACTGGGATCACTTCTTTGAACTTCACGATGAACCTACAGGATGGACCATCATAGCCACGACGGACCGTCACAAGCTTCGTAATCCTACACTTGGTCAGACTTCCCCATCTTCCTTCAGCAGCTGCACTACGTTGCCACCTATGGACCGTCACAAGCACGACAGACCGTCATAAGCTCCGTAAGTGGTCTCCTTTGCAGTTCTTCGCTCAAAATCTCCGCATTCAGCTTTGGACAGATTTTCTGCAAAACAAAGAGAAATTTATATAAAAATTAGCACAAAAAGGTTTTTGGACACACTAAACTTAAGGAAAAAGTATTAATAATACCGTGAAACCACGGTATATCAACACCCTCAACTTAAATTTGTTGTTCGTCCTCAAGCGACACACTATGACTCACTACACAATCTTTGTACAATAGTATCCATGTTTTATCCTTTGCAATCATTTGGCTATCAATCCCGATTAATCTCATCACATCTATGCATGATATCACTATTAGGCTTGAATTTTGTGGGATCAGAACATGACACAGACTCACCACGCACTAACACCTATCCTCTTCAATTTCTCACCTGGGTGCTAACAATTCTGGTATTGCAACTAGTGTCCTCACTTTAAAACAAAATCCTCCTTTTTCACACAATGATTTCAGTTTGAGTATAAGGATTAC</genome_strand>
        <mrna_strand>CGAGGGTCTTTGTTCTAATACACTTCAACTCTTGGAATTTGGGTACTGGGATCACTTCTCTGAACTTCACGACGAACCTGCAGGACGGACCGTCAGATCCACGACGGACCGTCACAAGCTTCGTAATCCCACACTTAGTCAGACTTCCCTATCTTCCTTCAGCAGCTGCACTACGCTTCCACCTACGGACCGTCACAAGCACGACGGACCGTCATAAGCTCCGTAGGTGGTTTCTTCTGCATTTCTTCGCTCAAAATCTCCGCATTCAGCTTTGGACAGATTTCCTGCAAAACAAAGAGTAACTTATATAAAAATTAGCACAAAAAGGCTTTTGGACACACTAAGCTTAAGGAAAAAGTATTAATAATACCGTGAAACCACGGTATATCAACACCCTCAACTTAAATTAGTTGTTTGTCCTCAAGCGACGCACTATGACTCACTACACAATCTTTGTACAATAGTATCCATGTTTTATCCTTTGCAATCATTTGGCTATCAATCCCGATTAATCTCATCAAATCTATGCATGCTATCACTATTAGGTTTGAATTTTGTGGGATCAGAATATGACACAGACTTACCATGCACTAACACCTATCCTCTTCAATTTCTCACCGAGGTGCTAACAATTCTAGTATTGCAACTAGTGTCCTCACTATAAGACAAAATCCTCCTTTTTCACACAGTGATTTTAGTTTGAGTATAAGGATTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E577845" ref_strand="+" ref_description="SGN-E577845 [LE08AD04]">
      <seq>actcctttatttgaattaaaacttgatagaaaaacatcttccaaggctacccagatactcgacaaggtctggatggagtcgaggtccagttgctgacgctgatctttgcctccttgcttccactagggccccctttctcctcctcgttgatcacgacgttgcaaactttcccttcttctttggttagcgataaccccttcaagtcgtctgagatctcatcaatattgtctcccatgaaacctgctaatcgaaatgattgatacaatggcggtatgggtttcttcaatggatagtagtacccatctctaggtggtcgccaatcgagccattcttcggtggtgtatttataacccaaaccaaaagtggtggaatgtcgaacaggctgtataggttcgactatcccttgtaatttagcccccaaacctttcccaagctcgaaaccgaaccaggccatcatatctatgattttttggctgaaccaaggttgcaactcaatattaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="130396" stop="129301"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="130102" g_stop="129599" g_length="504"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="502" r_length="502" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E577845" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="130102" e_stop="129599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCTTTTTATTTGAATTAAAACTTGATAGAAAAACATCTTCCAAGGCTACCCAGATGCTCGACGAGGTCTGGATGGAGTCGAGGTCAAGTTGCTGACGCTGATCTTTGCTTCCTTGCTTCCACTAGGGCCCCATTTCTCCTCCTCGTTGATCACGACGTTGCAAACTTTCCCCTCTTCTTTGGTTAGCGATAACCCCTTCAAGTTGTCTGAGATCTCATCAATACTGCCTCCTATGAAACCTGCTGATCGAAATGATTGATACAATGGCGGTATGGGTTTCTTCAATGGATAGTAGTACCCATCTCTAGGTGGTTGCCAATCGAGCCATTCTTCAATAGTGTACTTGTATCCCAAACGAAAAGTGGTGGAATGTCAAATAGGCTGTATAGGTTCGACTATCCCTTGCAATTCAGCCCCCAAACCCTTTCCCAAGCTCGAAACCAAACCAGGTCATCATATCTATGATTTTTTGCCTGAACCAAGGTTGCAACTCAATATTACC</genome_strand>
        <mrna_strand>ACTC-CTTTATTTGAATTAAAACTTGATAGAAAAACATCTTCCAAGGCTACCCAGATACTCGACAAGGTCTGGATGGAGTCGAGGTCCAGTTGCTGACGCTGATCTTTGCCTCCTTGCTTCCACTAGGGCCCCCTTTCTCCTCCTCGTTGATCACGACGTTGCAAACTTTCCCTTCTTCTTTGGTTAGCGATAACCCCTTCAAGTCGTCTGAGATCTCATCAATATTGTCTCCCATGAAACCTGCTAATCGAAATGATTGATACAATGGCGGTATGGGTTTCTTCAATGGATAGTAGTACCCATCTCTAGGTGGTCGCCAATCGAGCCATTCTTCGGTGGTGTATTTATAACCCAAACCAAAAGTGGTGGAATGTCGAACAGGCTGTATAGGTTCGACTATCCCTTGTAATTTAGCCCCCAAA-CCTTTCCCAAGCTCGAAACCGAACCAGGCCATCATATCTATGATTTTTTGGCTGAACCAAGGTTGCAACTCAATATTAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E351864" ref_strand="+" ref_description="SGN-E351864 [cTOS-8-K24]">
      <seq>acttcgaaggtgtttctccctgtatcagacttcctagtactccaaactttgttattccgggagattttcactaatttttaagcgatctcagcataagggcattctccataagatccaccttctataatgtccaacacttctttgttactatcatcctgtccctgatagaactatttcttccgtgactcatcatctatacagtgatttggaacacttctcaagaatgaggtgatctatcccaagaactactaactgactctactggtagtgccacaaaattatttactctgtctttgtggtttagtttcttcgagattggatagtagagtgccaagaaaacatctcttaattggttccaagtgaagattgagttgcatggaagctcagtgaaccatataggagcctctcccttcagtgagagaggaaacactgtgagccctattacatctagatccatgtcaggcctccccacactacatttacacactgcccttaccttagctatttgggcatgtggatcctcaggcggtagccctgaaaacaaacctctagcagtgagcatttgcatcaggctactagttaccataaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="144636" stop="145825"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="144936" g_stop="145525" g_length="590"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="589" r_length="589" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E351864" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E351864" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="144936" e_stop="145525"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGCGAAGGTGTTTCTCCCTGTATCAGACTTCCTAGTACTCCAAGCTTTGTTATTCTGGGAGATTTTCTCTAATTTTTCAGCAATCTCAGCATAAGGGCATTCTCCATAAGATCCACCTGCTATAGTGTCCAACACCACTTTGTTGTTATCATCCTGTCCCCGATAGAAGTATTCCTTCAGTGACTCATCATCTATACGGTGATTTGGAACACTTCTCATGAATGAGGTGAATCTATCCCAAGAACTACTAACTGACTCTCCTGGTAGTGCCACAAAGTTATTCACTCTGTCTTTGTGGTTTAGTTTCTTGGAGACTAGATAGTAGCGTGCCAAGAAAACATCTCTTAATTGGTTCCAAGTGAAGATTGAATTGTATGGGAGCTCAGTGAACCACATAGCCGCCTCTCCCGTCAGTGAGAGAGGAAACACTCTGAGCCCTATTACATCTAGATCCAAATCAGGCCTCCCCACACAACTTTTACACACTGCCCTTACCTTAGCTATATGGGCATGTGGATCCTCAGAAGGTAGCCCTAAAAACAAACCTGTGGCAGTGAGCATCTGCATCAGGCTACTAGTTACCACAAA</genome_strand>
        <mrna_strand>ACTTCGAAGGTGTTTCTCCCTGTATCAGACTTCCTAGTACTCCAAACTTTGTTATTCCGGGAGATTTTCACTAATTTTTAAGCGATCTCAGCATAAGGGCATTCTCCATAAGATCCACCTTCTATAATGTCCAACACTTCTTTGTTACTATCATCCTGTCCCTGATAGAACTATTTCTTCCGTGACTCATCATCTATACAGTGATTTGGAACACTTCTCAAGAATGAGGTG-ATCTATCCCAAGAACTACTAACTGACTCTACTGGTAGTGCCACAAAATTATTTACTCTGTCTTTGTGGTTTAGTTTCTTCGAGATTGGATAGTAGAGTGCCAAGAAAACATCTCTTAATTGGTTCCAAGTGAAGATTGAGTTGCATGGAAGCTCAGTGAACCATATAGGAGCCTCTCCCTTCAGTGAGAGAGGAAACACTGTGAGCCCTATTACATCTAGATCCATGTCAGGCCTCCCCACACTACATTTACACACTGCCCTTACCTTAGCTATTTGGGCATGTGGATCCTCAGGCGGTAGCCCTGAAAACAAACCTCTAGCAGTGAGCATTTGCATCAGGCTACTAGTTACCATAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E209683" ref_strand="+" ref_description="SGN-E209683 [cLEC-54-L6]">
      <seq>taatgaactaaattcccaaatgagtatgatgaggaggtgtgagtcctcattgatgtgcttggtgttgtaaccaagggttatggtaactataaatgctgcatgttaaggatattagttgattttatgatattgcttaatacatactgttccctattttgagttggccgatgatatctactcagtacccgtggtttgtactgacccctacttttatgtttatcttcttgttatttgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="147448" stop="148284"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="147748" g_stop="147984" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="236" r_length="236" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E209683" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>237</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E209683" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="147748" e_stop="147984"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATAAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTATAACCAAGGGTTATGGTAACAATAAATGTTGCATGCTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTTTCTATTTTGAGTTGACCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATTGTTTTCTTCTTGTTTATTTGTG</genome_strand>
        <mrna_strand>TAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTATAAATGCTGCATGTTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTCCCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGGTTTGTACTGACCCCTACTTTTATGTTTATCTTCTTG-TTATTTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E355114" ref_strand="+" ref_description="SGN-E355114 [cTOS-18-B12]">
      <seq>ttaggttcgttggtctcatcacacaagaacaggtctagtagagtctttaggaacggtagggggacgcctttacttttctttgagaggctataagactttaggaaaatttcaccctttcattctttctttcgtgctactacttgagtccaattggtatctaggcgatacaaattggtatctgaccatcttcactctcttttgcagatggttagaactagagcaacgaccacgtcaacaccaacaccggccagacaagaaacaactgagccagccactggggctgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="148094" stop="148979"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="148394" g_stop="148679" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E355114" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>286</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355114" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="148394" e_stop="148679"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTAAGAAACGGTAGGGGGACGCCTTTACTGTTCCTTAAGAGGCTATAAGACTTTAGGAAAATTTCACTCTTTCATTCTTCCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACGAATTGGTATCTGACCATCTTCACTCTCTTTCGCAGATGGTTAGAACTAGAGAAATGACTACGCCAACACCAACACCGGCCAGACAAGAAACAACTGAGCCAGCCACTGGGGCTGTGG</genome_strand>
        <mrna_strand>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTTAGGAACGGTAGGGGGACGCCTTTACTTTTCTTTGAGAGGCTATAAGACTTTAGGAAAATTTCACCCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACAAATTGGTATCTGACCATCTTCACTCTCTTTTGCAGATGGTTAGAACTAGAGCAACGACCACGTCAACACCAACACCGGCCAGACAAGAAACAACTGAGCCAGCCACTGGGGCTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E356912" ref_strand="+" ref_description="SGN-E356912 [cTOS-22-F17]">
      <seq>caggatcaaacaatacggaagccatgcaatcacaaactagaagattacctgtgatgacagcatcagatgcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcgtttgtctgcccattgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccgttttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataacttggtccaggacaatttatcctaatatgtccaatctccccacatccataacattctctggagtcactcataggccccttggagaagtgttgaccggtctgaggtggacccccaactacagtctgtagtgaagactgaatgggtcgagccgagtaacctccggaaccttgtcctctagagtaagaacccttaaactcacctccctttcgaaacctctttgatgttgatgtcgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctacctgtaaggccgaaatccgcaattctgacctcaaccccttcacaaaccggagaatccgctcttgaggactgaaacagagttgagtggcatatccggatagtgcacggaacttagcctcataagcattaaccgacatcctaccttgctctaggctcaggaactcatctcttttcctatccctcaaagtccgggggatatactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="150362" stop="148973"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="150062" g_stop="149273" g_length="790"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="790" r_length="790" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E356912" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>790</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E356912" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="150062" e_stop="149273"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGATCAAACAATATAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTGTCCGTTGCCCCTACCTTGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCCGTTTTGGTGACCACCATTTCCTCGACCACCACGTCCTCCAGAATAACGGCCTCTGCCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTTGACAATATCTCTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTGGGTTCATGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCAAACTCTGTCCTCTGGTGTAAGCACCATTAAACTCACCTCCCTTTCGAAACCTTTTTGATGTCGATGACGGGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACTACCTCTTGGAAGGATTTTGCCGTTGCCGCTAGCTGTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCAAATTCACTCTTGTGGACTGAAACACAGTTGGGTGGCATACCGGGATAATGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTAACCCTCAAAGTTCGGGGGATATACTT</genome_strand>
        <mrna_strand>CAGGATCAAACAATACGGAAGCCATGCAATCACAAACTAGAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTTGTCTGCCCATTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCGTTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTGGTCCAGGACAATTTATCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCACTCATAGGCCCCTTGGAGAAGTGTTGACCGGTCTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTCGAGCCGAGTAACCTCCGGAACCTTGTCCTCTAGAGTAAGAACCCTTAAACTCACCTCCCTTTCGAAACCTCTTTGATGTTGATGTCGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTACCTGTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGAGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCCGGATAGTGCACGGAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAGGAACTCATCTCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E356209" ref_strand="+" ref_description="SGN-E356209 [cTOS-20-H15]">
      <seq>ttcagaccgcccagggaaagcgtaacaatgggccctatcgttcgtctgtccgttgcccctaccatgttgtgatgtagtggccccagtttgcccattacctctgccattttggtgaccaccattacctcgaccaccacgtcctccagaataacggcctctaccatgaccacctctacctctagctattgggggtctataactttgtctgggacaatttttcctaatatgtccaatctccccacatccataacattctctggagtcaagcataggcccctcggagaagtgttaaccggtctgaggtggtctcccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagaaccattaaactcacctcccttccgaaacctttttgatgtcgatgttgtggtgaagtcgtctggcttcactccttccacttctatcacaaagtctaccacttcttggaaggattttgccgttgccgctatctgtaaggacgaaatccgcaattctgacctcaaccccttcacaaaccggcgaatccgctcttgaggactgaaacagagttgagtggcatatctggatagtgcacgaaacttagcctcataagcattaaccgacatcctaccttgctctaggctcaagaactcatcccttttcctatccctcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="150286" stop="148989"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="149986" g_stop="149289" g_length="698"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="698" r_length="698" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E356209" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E356209" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="149986" e_stop="149289"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTGTCCGTTGCCCCTACCTTGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCCGTTTTGGTGACCACCATTTCCTCGACCACCACGTCCTCCAGAATAACGGCCTCTGCCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTTGACAATATCTCTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTGGGTTCATGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCAAACTCTGTCCTCTGGTGTAAGCACCATTAAACTCACCTCCCTTTCGAAACCTTTTTGATGTCGATGACGGGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACTACCTCTTGGAAGGATTTTGCCGTTGCCGCTAGCTGTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCAAATTCACTCTTGTGGACTGAAACACAGTTGGGTGGCATACCGGGATAATGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTAACCCTCAAAG</genome_strand>
        <mrna_strand>TTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTGTCCGTTGCCCCTACCATGTTGTGATGTAGTGGCCCCAGTTTGCCCATTACCTCTGCCATTTTGGTGACCACCATTACCTCGACCACCACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGGGTCTATAACTTTGTCTGGGACAATTTTTCCTAATATGTCCAATCTCCCCACATCCATAACATTCTCTGGAGTCAAGCATAGGCCCCTCGGAGAAGTGTTAACCGGTCTGAGGTGGTCTCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGAACCATTAAACTCACCTCCCTTCCGAAACCTTTTTGATGTCGATGTTGTGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACCACTTCTTGGAAGGATTTTGCCGTTGCCGCTATCTGTAAGGACGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCGAATCCGCTCTTGAGGACTGAAACAGAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATAAGCATTAACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E353359" ref_strand="-" ref_description="SGN-E353359 [cTOS-15-G18]">
      <seq>gcaaggtaggatgtaggtcaatgcatatgaggctaagtttcgtgcactatccagatatgccactcaactttgtttcagtccacaagagaggattcgtcgttttgtgaaagggttgaggtcagagttgcggatttcagcgttacaggtagcggctacggcaaaatccttgcaagaaatggttgacttcgatgtaattctgggtatgacttggctttctccaaattttgcaatcttggattgtaatgctaaaaccgtgacgttagccaagcctgggacagatctgttagtgtaggagggtgactacacttccaatccggtgcgtatcatctcctttcttcgtgctaagaaaatggttagtaaagggtgtttagctttcttggcacatctcaaggataacactacccaagtaccttcgattgactcagtttcagtagttcgtgagtttatggatgtgttccctgcagatcatcctggtatgccaccggatagggatattgacttctgtattgatctcgaaccgggcacacgccccatttttatacccccttatagaatggctcccgcagagttaagagagttaaaggcacaacttcaagagttattgaacaaaggcttcattagaccaagtgcatctccttggggtgctccggttttgttgtaaagatcggcagtttttgaatgtgcatagactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="149029" stop="151037"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="149329" g_stop="149501" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.896"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="149502" i_stop="150245" i_length="744">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="150246" g_stop="150773" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="694" r_length="521" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E353359" ref_strand="-">
        <total_alignment_score>0.900</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E353359" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="149329" e_stop="149501"/>
          <exon e_start="150246" e_stop="150773"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCATTATCCCGGTATGCCACCCAACTGTGTTTCAGTCCACAAGAGTGAATTTGCCGGTTTGTGAAGGGGTTGAGGTCAGAATTGCGGATTTCGGCCTTACAGCTAGCGGCAACGGCAAAATCCTTCCAAGAGGTAGTAGACTTTGTGATAGAAGTGGAAGGAGTGAAGCCAGACGACTTCACCCCGTCATCGACATCAAAAAGGTTTCGAAAGGGAGGTGAGTTTAATGGTGCTTACACCAGAGGACAGAGTTTGGGAAGTTACTCAGTCCGACCAATTCAGTCTTCACTACAGACTGTAGTTGGGGGTCCACCTCCGACCGGTCAACACTTCTCTGAGAGACCTATGCATGAACCCAGAGAGTGCTATGGATGTGGGGAGATTGGACATATTAAGAGATATTGTCAAAAACAGAGTTACAGACCTCCAAATGTTAGAGGTAGAGGTGGTCATGGCAGAGGCCGTTATTCTGGAGGACGTGGTGGTCGAGGAAATGGTGGTCACCAAAACGGCCGAGGTGATGGGCAAACTGGAGCCACTACATCACAACAAGGTAGGGGCAACGGACAGACGAACGATAGGGCCCATTGTTACGCTTTCCCTGGGCGGTCTGAAGCGGAGGCATCTGATGCTGTCATCACAGGTAATCTTTTGGTTTGTGATTGCATGGCTTCTATATTGTTTGATCCTGGATCCACATTTTCTTATGTATCTTCCTCATTTGCTGATGGTCTAACTTTACATTGTGAATTACTTGATATGCCTATTCGTGTTTCTACTCCGGTAGGTGAGTCTGTGGTAGTTGAAAAGGTGTATAGGTCTTGTTTGGTGAACTTTGTGGGGAGCAATACTTATGTAGATTTGGTTATCTTAGAAATGGATGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCGATCTTGGATAGTAATGCTAAAACGGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTAAGTCGGTCTCGGTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGATTTCTGTATTGACCTTGAACTGGGTACTCGCCTTATTTCGATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTAAACAAAGACTTTATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGATTTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGAATGTGTATAGACTACA</genome_strand>
        <mrna_strand>GCAAGGTAGGATGTAGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGAGGATTCGTCGTTTTGTGAAAGGGTTGAGGTCAGAGTTGCGGATTTCAGCGTTACAGGTAGCGGCTACGGCAAAATCCTTGCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACCGTGACGTTAGCCAAGCCTGGGACAGATCTGTTAGTGTAGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATAACACTACCCAAGTACCTTCGATTGACTCAGTTTCAGTAGTTCGTGAGTTTATGGATGTGTTCCCTGCAGATCATCCTGGTATGCCACCGGATAGGGATATTGACTTCTGTATTGATCTCGAACCGGGCACACGCCCCATTTTTATACCCCCTTATAGAATGGCTCCCGCAGAGTTAAGAGAGTTAAAGGCACAACTTCAAGAGTTATTGAACAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTTTTG-TTGT--A-AAG-A--TCGGCAGTTTTTGAATGTGCATAGACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E244046" ref_strand="+" ref_description="SGN-E244046 [cLEE-1-H7]">
      <seq>aaacacgaataggcatatcaagtaattcacaatgtaaagttagaccattagcaaatgaggaagatacataagaaaatgtggatccaggatcaaacaatacagaagccatgcaatcacaaaccaaaagattacctgtgatgacaacatcagattcctccgcttcagaccgcccagggaaagcgtaacaatgggccctatcattcttatgtctgttgcccctaccatgttgtgatgtagtggctccagtttgcccatcacctcggccgttttggtgaccaccatttcctcgaccgccacgtcctccagaataacggactctgccatgaccacctctacctctaacctttggaggtctgtaactctgttttggacaatatctcttaatatgtccaatctccccacacccatagcactctctgggttcatgcataagtctctcagagaagtgttgaccggtcgaaggtggacccccaactacagtctgtagtgaagactgaattggtcggactgagtaacttcccgaaccctgtcctctagtgtaagcaccattaaactcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="150446" stop="149288"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="150146" g_stop="149588" g_length="559"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="559" r_length="559" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E244046" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="150146" e_stop="149588"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATCAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATATAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTGTCCGTTGCCCCTACCTTGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCCGTTTTGGTGACCACCATTTCCTCGACCACCACGTCCTCCAGAATAACGGCCTCTGCCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTTGACAATATCTCTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTGGGTTCATGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCAAACTCTGTCCTCTGGTGTAAGCACCATTAAACTCACC</genome_strand>
        <mrna_strand>AAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAACATCAGATTCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCATTCTTATGTCTGTTGCCCCTACCATGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCCGTTTTGGTGACCACCATTTCCTCGACCGCCACGTCCTCCAGAATAACGGACTCTGCCATGACCACCTCTACCTCTAACCTTTGGAGGTCTGTAACTCTGTTTTGGACAATATCTCTTAATATGTCCAATCTCCCCACACCCATAGCACTCTCTGGGTTCATGCATAAGTCTCTCAGAGAAGTGTTGACCGGTCGAAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCGAACCCTGTCCTCTAGTGTAAGCACCATTAAACTCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E355244" ref_strand="+" ref_description="SGN-E355244 [cTOS-18-K20]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttagcaaatgaggaagatacantagaaaacgtggatcccaggatcaacaatacagaagccatgcaatcacaatcgaaagattacctgtgatgacagcatctaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="151056" stop="149695"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="150756" g_stop="149995" g_length="762"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="761" r_length="761" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E355244" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="150756" e_stop="149995"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTTACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGTCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATCGAAATAAGGCGAGTACCCAGTTCAAGGTCAATACAGAAATCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCGAGACCGACTTAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACTATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTATTGCTCCCCACAAAGTTCACCAAACAAGACCTATACACCTTTTCAACTACCACAGACTCACCTACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATCAGCAAATGAGGAAGATACATAAGAAAATGTGGAT-CCAGGATCAAACAATATAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAGCATCAGAT</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAGCAAATGAGGAAGATACANTAGAAAACGTGGATCCCAGGATC-AACAATACAGAAGCCATGCAATCAC-AATCGAAAGATTACCTGTGATGACAGCATCTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E352716" ref_strand="+" ref_description="SGN-E352716 [cTOS-11-H19]">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="150653" stop="149723"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="150353" g_stop="150023" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E352716" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="150353" e_stop="150023"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACTATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTATTGCTCCCCACAAAGTTCACCAAACAAGACCTATACACCTTTTCAACTACCACAGACTCACCTACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATCAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATATAGAAGCCATGCAATCACAAACCAA</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E351414" ref_strand="+" ref_description="SGN-E351414 [cTOS-12-D7]">
      <seq>cggaaactcccatccttcttcttcacaaacaaaatcggagcaccccaaggagatgcacttggtctaatgaaacctttgctcaacaactcttgaagttgggcctttaactctcttaactctacgggagccattctataagggggtatagaaatggggcgtgtgcccggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcagggaacacatccaaaaactcacagactataaaaaccgactcaatcgaaggtacttgggtagtgtcatccttgagatgtgccaagaaagctaaacaccctttactaaccattttcttagcacgaagaaaggagatgatgcacaccggattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaatgtcaccgttttagcattacaatccaagatcgcaaattgcggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaaatctacataagtgttgctccccacaaagttcaccaaacaagacctatataccttttcaactaccacagactcacccaccggagtagaaacacgaataggcatatcaagtaattcacaatgtaaatttagaccgttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="151056" stop="149796"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="150756" g_stop="150096" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="661" r_length="661" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E351414" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E351414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="150756" e_stop="150096"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAACTCCCATCCTTCTTCTTTACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGTCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATCGAAATAAGGCGAGTACCCAGTTCAAGGTCAATACAGAAATCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCGAGACCGACTTAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACTATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTATTGCTCCCCACAAAGTTCACCAAACAAGACCTATACACCTTTTCAACTACCACAGACTCACCTACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATCAG</genome_strand>
        <mrna_strand>CGGAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAACCTTTGCTCAACAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCTACGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCCGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAAAAACTCACAGACTATAAAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATGCACACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAATGTCACCGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E355232" ref_strand="+" ref_description="SGN-E355232 [cTOS-18-A6]">
      <seq>tcaatgcgaggaagaggatacttgttcttaatagttaccttgttcagttgtctgtagtctatgcacattctaaaacttccatccttcttcttcacaaataaaactggagcaccccaaggagatgcacttggtctaatgaagaccttgctcaacaactcttgaagttgagcctttaactctcttaattcggcgggagccattctataagggggtatagaaatggggcgtgtgcctggttcaagatcgatacagaagtcaatatccctatctggtggcataccaggaagatctgcaggaaacacgtccaaaaactcgcggactaccgaaaccgactcaattgagggtacttgagtagtgtcatccttgagatgtgccaagaaagctgaacaccctttactaaccattttcttagcacgaagaaaggatatgatacgcaccagattggaagtgtagtcaccctcccacactaacggatctgtcccaggcttggctaacgtcaccgttttagcattacaatccaagatcgcaaaatttggagaaagccaagtcatacccagaattacatcaatgtcacccatttctaaaaaaccaaatctacataagtgttgctccccacgaaattcnacaaaacagaactatgtaccttttcaactaccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="151125" stop="149867"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="150825" g_stop="150167" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="658" r_length="658" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E355232" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355232" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="150825" e_stop="150167"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACTTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGTCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATCGAAATAAGGCGAGTACCCAGTTCAAGGTCAATACAGAAATCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCGAGACCGACTTAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACTATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTATTGCTCCCCACAAAGTTCACCAAACAAGACCTATACACCTTTTCAACTACCAC</genome_strand>
        <mrna_strand>TCAATGCGAGGAAGAGGATACTTGTTCTTAATAGTTACCTTGTTCAGTTGTCTGTAGTCTATGCACATTCTAAAACTTCCATCCTTCTTCTTCACAAATAAAACTGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACCTTGCTCAACAACTCTTGAAGTTGAGCCTTTAACTCTCTTAATTCGGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGTGTGCCTGGTTCAAGATCGATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGAAACACGTCCAAAAACTCGCGGACTACCGAAACCGACTCAATTGAGGGTACTTGAGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTGAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGATATGATACGCACCAGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACAATCCAAGATCGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAATGTCACCCATTTCTAA-AAAACCAAATCTACATAAGTGTTGCTCCCCACGAAATTCNACAAAACAGAACTATGTACCTTTTCAACTACCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E368762" ref_strand="+" ref_description="SGN-E368762 [TUS-22-P2]">
      <seq>gtctcacccaattcttcactgtctcaatcttacaaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagagtatatcagtatatcatcaataaacatgatgacaaagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagagaagacacaagcaccttgtaactgatcgaacaagtcatcaatgcgaggaagtggatacttgttcttaatagttaccttgttcaactgccggtagtctatgcacatccgaaaactcccatccttcttcttcacaaaccaaaccggagcaccccaaggagatgcacttggtctaatgaagactttgctcaaaaactcttgaagttgggcctttaactctcttaactccgcgggagccattctataagggggtatagaaatggggcgagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="151574" stop="150296"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="151274" g_stop="150595" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="679" r_length="679" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E368762" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368762" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="151274" e_stop="150595"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATTCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCAAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATTCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAAGAGGTCCAAATACGGCTTAAAAATCCCATTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGAAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACTTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGTCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATCGAAATAAGGCGAGTA</genome_strand>
        <mrna_strand>GTCTCACCCAATTCTTCACTGTCTCAATCTTACAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGTATATCAGTATATCATCAATAAACATGATGACAAAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGTGGATACTTGTTCTTAATAGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTCACAAACCAAACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGACTTTGCTCAAAAACTCTTGAAGTTGGGCCTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E379315" ref_strand="+" ref_description="SGN-E379315 [TUS-1-J2]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttncactgccggtagcctatgcacatccgaaaactccaatccttcttctttacaaacaaaaccggagcaccccaaggagatgcagttggtctaatgaagcctttgctcacaactctttgaagtggtcttttaactctcttaactctgcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="151645" stop="150333"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="151345" g_stop="150633" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="712" r_length="712" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E379315" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E379315" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="151345" e_stop="150633"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGACGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATTCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCAAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATTCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAAGAGGTCCAAATACGGCTTAAAAATCCCATTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGAAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACTTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGTCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTNCACTGCCGGTAGCCTATGCACATCCGAAAACTCCAATCCTTCTTCTTTACAAACAAAACCGGAGCACCCCAAGGAGATGCAGTTGGTCTAATGAAGCCTTTG-CTCACAACTCTTTGAAGTGGTCTTTTAACTCTCTTAACTCTGCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E375319" ref_strand="+" ref_description="SGN-E375319 [TUS-15-F18]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatgcgaggaagaggatacttgttctttatggttaccttgttcaactgccggtagcctatgcacatccgaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="151645" stop="150450"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="151345" g_stop="150750" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="596" r_length="596" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E375319" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="151345" e_stop="150750"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGACGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATTCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCAAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATTCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAAGAGGTCCAAATACGGCTTAAAAATCCCATTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGAAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACTTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAAC</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGCCTATGCACATCCGAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E204434" ref_strand="+" ref_description="SGN-E204434 [cLEC-13-J16]">
      <seq>gaatcccttgacaaatcggcggtagtagctagctaacccaacaaagctccttatttctgacacattagtaggtcttacccaattcttcactgtctcaatcttagaaggatccaccatcactccatccttagaaaccacgttccccaagaaggacactacatctagccaaaactcacacttagagaacttggcataaaactttttctccctcaacatttccaataccattctcaaatgctcttcatgttcctccttacttttagagtatatcagtatatcatcaataaatacgatcacaaagagatccaaatatggcttaaaaatcccttttattaaactcataaacgcagcaggggcattcataagaccaaaagacatcactacaaatttgtaatgcccatacctggttctaaaagcagtctttggcacatccgttgcccgtattttcaattgatgataaccggatctcaagtcaatcttagaaaagacacaagcaccttgtaactgatcgaacaagtcattaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="151645" stop="150520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="151345" g_stop="150820" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="526" r_length="526" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E204434" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204434" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="151345" e_stop="150820"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATCCCTTGACAAATCGACGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATTCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCAAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATTCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAAGAGGTCCAAATACGGCTTAAAAATCCCATTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGAAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATG</genome_strand>
        <mrna_strand>GAATCCCTTGACAAATCGGCGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTTCCCCAAGAAGGACACTACATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAACTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTCCTTACTTTTAGAGTATATCAGTATATCATCAATAAATACGATCACAAAGAGATCCAAATATGGCTTAAAAATCCCTTTTATTAAACTCATAAACGCAGCAGGGGCATTCATAAGACCAAAAGACATCACTACAAATTTGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAAAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E240817" ref_strand="+" ref_description="SGN-E240817 [cLED-24-J5]">
      <seq>gtctcacccatttcttcactgtctcaatcttaccaggatccaccatcactccatccttagaaaccacgtgccccaagaaggacactgcatctatccaaaactcacacttagagaacttggcataaagctttttctccctcaacatttctaatacaattctcaaatgctcctcatgttccttcttactattagaggatatcagtatatcatcaatgaacatgatgacgcagagatccaaatatggcttaaaatcccgttcatcaagctcatgaacgcagcaggggcattcgtaagaccaaaagacatcactacaaattcgtaatgcccatacctggttctaaaagcagtctttggcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="151574" stop="150616"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="151274" g_stop="150916" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.916"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E240817" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>359</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240817" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="151274" e_stop="150916"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATTCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCAAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATTCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAAGAGGTCCAAATACGGCTTAAAAATCCCATTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGAAGTCTTTGGCACA</genome_strand>
        <mrna_strand>GTCTCACCCATTTCTTCACTGTCTCAATCTTACCAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTATCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCTAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTATTAGAGGATATCAGTATATCATCAATGAACATGATGACGCAGAGATCCAAATATGGCTT-AAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGGTTCTAAAAGCAGTCTTTGGCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E577888" ref_strand="+" ref_description="SGN-E577888 [LE08BA01]">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="-" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="153126" stop="152349"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="152826" g_stop="152650" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="-" ref_id="SGN-E577888" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E577888" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="152826" e_stop="152650"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAGATTCCGCTAAGGGTAAGAAGCTATCCCAATGGCCACCAAATTCTATCACACACGCACGAAGCATATCCTCAAACACTTGAATCGTTCGCTCAGACTGACCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E242359" ref_strand="+" ref_description="SGN-E242359 [cLEE-3-K21]">
      <seq>cctaatctactttgttaataatgatgccttggtataaaagaaggcttgatgaacgaaagtggtgagattaggggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgtcacgttctgacaccaggatagaatatggatcgggtgccacgttccggtgccaggatagtatattgaggagtggagtgtcacgtaaggacacgaggggaataaatatgatgaatcttgaaatatgttaatatatgcaatccaatgaactaaattcccaaataagtatgatgaggaggtgtgagtcctcattgatgtgcttggtgatgcaaccaagggttatggtaattgcaaatgctgcatgctaaggatattagttaattttatgatattgcttaatacatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0323C04-uoJKs/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0323C04.2" temp_strand="+" temp_description="C02HBa0323C04.2  AC215440.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0323C04 sequenced_by:kribb upload_account_name:korea">
        <position start="146963" stop="155228"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="154299" g_stop="154582" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="284" r_length="284" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="154583" i_stop="154697" i_length="115">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="154698" g_stop="154928" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="515" r_length="231" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0323C04.2" gen_strand="+" ref_id="SGN-E242359" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0323C04.2" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242359" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="154299" e_stop="154582"/>
          <exon e_start="154698" e_stop="154928"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTAATCTACTTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCAGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGAGTGCCGCGTTCCGGTACCAGGATAGTATATGAGGATCGGAGTGTCACGTTCCAACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATGACGATCGGAGTGTCACGTTCCGACACCAGGATAGTATATTGAGGAGCGGAGTGTCACGTACCGACACGAGGGGAATAAAGATAATGAATCTTGAAATATGTTAATATATCCAATCTAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTGTAAATGCTGCATGCTAAGGATCTTAGTTGATTTTATGATATTGCTTAATACATAAT</genome_strand>
        <mrna_strand>CCTAATCTACTTTGTTAATAATGATGCCTTGGTATAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGTCACGTTCTGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTGCCAG...................................................................................................................GATAGTATATTGAGGAGTGGAGTGTCACGTAAGGACACGAGGGGAATAAATATGATGAATCTTGAAATATGTTAATATATGCAATCCAATGAACTAAATTCCCAAATAAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGATGCAACCAAGGGTTATGGTAATTGCAAATGCTGCATGCTAAGGATATTAGTTAATTTTATGATATTGCTTAATACATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>51</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="50785" PGL_stop="53658"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="50785" e_stop="50820"/>
            <exon e_start="53077" e_stop="53460"/>
            <exon e_start="53572" e_stop="53658"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="1.000" e_score="0.944"/>
          <exon-intron don_prob="0.988" acc_prob="0.992" e_score="0.977"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.944">
            <gDNA_exon_boundary e_start="50785" e_stop="50820" e_length="36"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="1.000">
            <gDNA_intron_boundary i_start="50821" i_stop="53076" i_length="2256"/>
          </intron>
          <exon e_serial="2" e_score="0.977">
            <gDNA_exon_boundary e_start="53077" e_stop="53460" e_length="384"/>
          </exon>
          <intron i_serial="2" don_prob="0.988" acc_prob="0.992">
            <gDNA_intron_boundary i_start="53461" i_stop="53571" i_length="111"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="53572" e_stop="53658" e_length="87"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50785" stop="50820"/>
              <exon start="53077" stop="53460"/>
              <exon start="53572" stop="53658"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313280" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTGAAAAACTTTCAATCTGACGTTCTTTCTTTGAG : ATTGAAATGGCTAGTTTTCCTGCTGCAACATCCAACACGTCCAGAAAGAGGGCAAAAAAATCAACACCTTCATGTCGAAGGATATGGACTCCAGAAGAGGAACTTACTCTTATAGATGGATTAAAAGAATTTTGTGTTAATGGTTGGAGAGGAGATAATGGAACCTTTAGACATGGATATTTAATGGAATTGGAACACTACATGAATGCTCGTCATCCTAGTTGTGGATTGAAATCTCTACCACATGTTGATTCTAAAATAAGAGCATGGAAAAAGAGTTATGCAACCATATCGTTGCTAAAGAGTCGAAGTGGTTTAGGATTTCAATATAGTGACGGAAGTATCTTAGTTGATTATCCAAAAGCTTGGGATGACTTGATAAAG : GTTGATCCAAATGCCAAATCAATGAACTTAAAAAAATGGCCATTATTTGCTGACTGGGAAGAGATATTTGGCAAGGATAGAGCTACT</gDNA_template>
            <first_frame> I  E  K  L  S  I  *  R  S  F  F  E  :  I  E  M  A  S  F  P  A  A  T  S  N  T  S  R  K  R  A  K  K  S  T  P  S  C  R  R  I  W  T  P  E  E  E  L  T  L  I  D  G  L  K  E  F  C  V  N  G  W  R  G  D  N  G  T  F  R  H  G  Y  L  M  E  L  E  H  Y  M  N  A  R  H  P  S  C  G  L  K  S  L  P  H  V  D  S  K  I  R  A  W  K  K  S  Y  A  T  I  S  L  L  K  S  R  S  G  L  G  F  Q  Y  S  D  G  S  I  L  V  D  Y  P  K  A  W  D  D  L  I  K  :  V  D  P  N  A  K  S  M  N  L  K  K  W  P  L  F  A  D  W  E  E  I  F  G  K  D  R  A  T </first_frame>
            <second_frame>  L  K  N  F  Q  S  D  V  L  S  L  R :   L  K  W  L  V  F  L  L  Q  H  P  T  R  P  E  R  G  Q  K  N  Q  H  L  H  V  E  G  Y  G  L  Q  K  R  N  L  L  L  *  M  D  *  K  N  F  V  L  M  V  G  E  E  I  M  E  P  L  D  M  D  I  *  W  N  W  N  T  T  *  M  L  V  I  L  V  V  D  *  N  L  Y  H  M  L  I  L  K  *  E  H  G  K  R  V  M  Q  P  Y  R  C  *  R  V  E  V  V  *  D  F  N  I  V  T  E  V  S  *  L  I  I  Q  K  L  G  M  T  *  *  R :   L  I  Q  M  P  N  Q  *  T  *  K  N  G  H  Y  L  L  T  G  K  R  Y  L  A  R  I  E  L   </second_frame>
            <third_frame>   *  K  T  F  N  L  T  F  F  L  *   : D  *  N  G  *  F  S  C  C  N  I  Q  H  V  Q  K  E  G  K  K  I  N  T  F  M  S  K  D  M  D  S  R  R  G  T  Y  S  Y  R  W  I  K  R  I  L  C  *  W  L  E  R  R  *  W  N  L  *  T  W  I  F  N  G  I  G  T  L  H  E  C  S  S  S  *  L  W  I  E  I  S  T  T  C  *  F  *  N  K  S  M  E  K  E  L  C  N  H  I  V  A  K  E  S  K  W  F  R  I  S  I  *  *  R  K  Y  L  S  *  L  S  K  S  L  G  *  L  D  K   : G  *  S  K  C  Q  I  N  E  L  K  K  M  A  I  I  C  *  L  G  R  D  I  W  Q  G  *  S  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50806" stop="50820"/>
                    <exon start="53077" stop="53460"/>
                    <exon start="53572" stop="53658"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>486</number_coding_nucleotides>
                  <number_encoded_amino_acids>162</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSFFEIEMASFPAATSNTSRKRAKKSTPSCRRIWTPEEELTLIDGLKEFCVNGWRGDNGTFRHGYLMELEHYMNARHPSCGLKSLPHVDSKIRAWKKSYATISLLKSRSGLGFQYSDGSILVDYPKAWDDLIKVDPNAKSMNLKKWPLFADWEEIFGKDRAT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="53968" PGL_stop="54508"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="53968" e_stop="54404"/>
            <exon e_start="54496" e_stop="54508"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.939" e_score="0.982"/>
          <exon-only e_score="0.538"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="53968" e_stop="54404" e_length="437"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.939">
            <gDNA_intron_boundary i_start="54405" i_stop="54495" i_length="91"/>
          </intron>
          <exon e_serial="2" e_score="0.538">
            <gDNA_exon_boundary e_start="54496" e_stop="54508" e_length="13"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53968" stop="54404"/>
              <exon start="54496" stop="54508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233833" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54003" stop="54404"/>
              <exon start="54496" stop="54508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234436" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCATCATCTTCTAAAGTCAACGAAAAAGGTAGATGCAAAAAAAGAAAAACAGTTGAAGATGATAATGAGACTGTTCTTAAAGGTTTGATGGAGGTGATGAAACAATTCACTGAAAGCCATGATAAGAGAATGGCTTCTTTAATTGACAAGCTAGGAGAGCGTGATCTATCTGAAATTCGTGGTAAGATATTTTCTATTATTGGATCCCCTGCATATGAAATATACAACTCAGATGAACGAGTTAAGGCAGCAATGGGAATTACTCAAGATATAAAGAGAATGGAATTCTTCTTAAGCATCAGCGAACTTGAACGTCACAGTATGATATGGATGATTATTAATGATAAGCTTTAATTCACTGAATGGTTTTTGTGTAGCTATTTTGTAAGGTCTAACCATAATGGGATCTTTTGTTACCTAGTAGAATGTCCACAAAT : CCAACTAAAATGA</gDNA_template>
            <first_frame> A  S  S  S  K  V  N  E  K  G  R  C  K  K  R  K  T  V  E  D  D  N  E  T  V  L  K  G  L  M  E  V  M  K  Q  F  T  E  S  H  D  K  R  M  A  S  L  I  D  K  L  G  E  R  D  L  S  E  I  R  G  K  I  F  S  I  I  G  S  P  A  Y  E  I  Y  N  S  D  E  R  V  K  A  A  M  G  I  T  Q  D  I  K  R  M  E  F  F  L  S  I  S  E  L  E  R  H  S  M  I  W  M  I  I  N  D  K  L  *  F  T  E  W  F  L  C  S  Y  F  V  R  S  N  H  N  G  I  F  C  Y  L  V  E  C  P  Q  I :   Q  L  K  * </first_frame>
            <second_frame>  H  H  L  L  K  S  T  K  K  V  D  A  K  K  E  K  Q  L  K  M  I  M  R  L  F  L  K  V  *  W  R  *  *  N  N  S  L  K  A  M  I  R  E  W  L  L  *  L  T  S  *  E  S  V  I  Y  L  K  F  V  V  R  Y  F  L  L  L  D  P  L  H  M  K  Y  T  T  Q  M  N  E  L  R  Q  Q  W  E  L  L  K  I  *  R  E  W  N  S  S  *  A  S  A  N  L  N  V  T  V  *  Y  G  *  L  L  M  I  S  F  N  S  L  N  G  F  C  V  A  I  L  *  G  L  T  I  M  G  S  F  V  T  *  *  N  V  H  K   : S  N  *  N   </second_frame>
            <third_frame>   I  I  F  *  S  Q  R  K  R  *  M  Q  K  K  K  N  S  *  R  *  *  *  D  C  S  *  R  F  D  G  G  D  E  T  I  H  *  K  P  *  *  E  N  G  F  F  N  *  Q  A  R  R  A  *  S  I  *  N  S  W  *  D  I  F  Y  Y  W  I  P  C  I  *  N  I  Q  L  R  *  T  S  *  G  S  N  G  N  Y  S  R  Y  K  E  N  G  I  L  L  K  H  Q  R  T  *  T  S  Q  Y  D  M  D  D  Y  *  *  *  A  L  I  H  *  M  V  F  V  *  L  F  C  K  V  *  P  *  W  D  L  L  L  P  S  R  M  S  T  N  :  P  T  K  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53968" stop="54321"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>351</number_coding_nucleotides>
                  <number_encoded_amino_acids>117</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASSSKVNEKGRCKKRKTVEDDNETVLKGLMEVMKQFTESHDKRMASLIDKLGERDLSEIRGKIFSIIGSPAYEIYNSDERVKAAMGITQDIKRMEFFLSISELERHSMIWMIINDKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="64488" PGL_stop="62728"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64488" e_stop="63724"/>
            <exon e_start="63274" e_stop="63078"/>
            <exon e_start="63004" e_stop="62728"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.642" e_score="0.995"/>
          <exon-intron don_prob="0.924" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="64488" e_stop="63724" e_length="765"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.642">
            <gDNA_intron_boundary i_start="63723" i_stop="63275" i_length="449"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="63274" e_stop="63078" e_length="197"/>
          </exon>
          <intron i_serial="2" don_prob="0.924" acc_prob="0.993">
            <gDNA_intron_boundary i_start="63077" i_stop="63005" i_length="73"/>
          </intron>
          <exon e_serial="3" e_score="0.986">
            <gDNA_exon_boundary e_start="63004" e_stop="62728" e_length="277"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64488" stop="63724"/>
              <exon start="63274" stop="63168"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E693067" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64352" stop="63724"/>
              <exon start="63274" stop="63246"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374750" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64352" stop="63927"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64184" stop="63938"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313053" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63916" stop="63724"/>
              <exon start="63274" stop="63078"/>
              <exon start="63004" stop="62728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374749" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63761" stop="63724"/>
              <exon start="63274" stop="63078"/>
              <exon start="63004" stop="62728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346525" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCTCTCGAACGCTCATCTCCATGCAGAAGTCTTCAGAAACTGGTTCTATGATTGGAAATGAGAGTCATTTATCACATTGGGAAGGAGGCTGTGGACCGAAAGCTGGTAAAACTGTGTTCGAGCCTTGCTTATCTCAGAATCAGATCAATGAGAAGATGATTGAACAGAAAGCACGAGTGGTTTCCCCTTACTTTTTGAACTCAAGGAATGGAGAAACTGAAGGTTGTGGACTGAAAGCTGGTAAAACTGTGTTCGAGCCTTGCTTATCTCAAAATCAGATCAATGAGAAGATGATTGAACAGAAAGCACGAGCGGTTTGCCCTTACTTTTTGAACTCAAGGAATGGAGAAACTGAAATGAAAAAAGGCAGGTCTGTAGAATGTGTGAAGAAAAGAAATGATAAAAAATTACGAACCAAAGTTCGAGTGGTTTCCCCTTACTTTGCTAACTTAAAAGTGGGAGAAGAAATAAAGGTAGGTAAGGATAGTTCAAACGCTTCGAAGAACTGTCTCAATGGAAGAAAGGTTTCTCCCTACTTTCAGAATGCATATCGTGAAAAGAAGAAGAGTACAATAGGTTCAAAAAGACAGAAACCTTGTCTCTCTGCTTCCCAGAAAAGAGACGAGGCATATTTAAGGAGGAGTGAAGATAACATGTGGGTACCTCCTCGATCCCATTTTAATCTCCTCCAAGAAAACCATGCTCATGATCCTTGGAGGGTGTTGGTTATTTGCATGCTTTTGAATTGCACCACCGGTGTGCAG : GTTAGGAGAGTGGTAGACGAGTTTTTCACTCTGTGTCCAAATGCTGTGGCAGCAACAGAGGTTGCTGTAGAGGATATAGAAAAGTTGCTGCGACCTTTAGGATTATATACAAAGAGGTCACTGTCTATTCCGCGTCTCTCTCAAGAATATCTTGGAAAAAATTGGACTCATGTCACACAGCTGCATGGTATTGGCAA : GTATGCAGCTGATGCATATGCAATATTTTGTACGGGCAATTGGGATCAAGTACATCCAAATGATCACATGCTAACAAAATACTGGGAATTCCTGCATGCAAATGGCTCGGCCTCAACCTGAGGGTGCAATGTATTTACCTGAAGATGATGCATAGTTAGGGTATCTTTTGGGGGTCAGTTGCATATTTTCGGTAGATTAACCTCTTGACCATTTTTGTGGTGTATAGTACTTGCCTAAGCAACAGCTTAATTAATATATCATCTCTGCATATGACAG</gDNA_template>
            <first_frame> L  S  R  T  L  I  S  M  Q  K  S  S  E  T  G  S  M  I  G  N  E  S  H  L  S  H  W  E  G  G  C  G  P  K  A  G  K  T  V  F  E  P  C  L  S  Q  N  Q  I  N  E  K  M  I  E  Q  K  A  R  V  V  S  P  Y  F  L  N  S  R  N  G  E  T  E  G  C  G  L  K  A  G  K  T  V  F  E  P  C  L  S  Q  N  Q  I  N  E  K  M  I  E  Q  K  A  R  A  V  C  P  Y  F  L  N  S  R  N  G  E  T  E  M  K  K  G  R  S  V  E  C  V  K  K  R  N  D  K  K  L  R  T  K  V  R  V  V  S  P  Y  F  A  N  L  K  V  G  E  E  I  K  V  G  K  D  S  S  N  A  S  K  N  C  L  N  G  R  K  V  S  P  Y  F  Q  N  A  Y  R  E  K  K  K  S  T  I  G  S  K  R  Q  K  P  C  L  S  A  S  Q  K  R  D  E  A  Y  L  R  R  S  E  D  N  M  W  V  P  P  R  S  H  F  N  L  L  Q  E  N  H  A  H  D  P  W  R  V  L  V  I  C  M  L  L  N  C  T  T  G  V  Q  :  V  R  R  V  V  D  E  F  F  T  L  C  P  N  A  V  A  A  T  E  V  A  V  E  D  I  E  K  L  L  R  P  L  G  L  Y  T  K  R  S  L  S  I  P  R  L  S  Q  E  Y  L  G  K  N  W  T  H  V  T  Q  L  H  G  I  G  K :   Y  A  A  D  A  Y  A  I  F  C  T  G  N  W  D  Q  V  H  P  N  D  H  M  L  T  K  Y  W  E  F  L  H  A  N  G  S  A  S  T  *  G  C  N  V  F  T  *  R  *  C  I  V  R  V  S  F  G  G  Q  L  H  I  F  G  R  L  T  S  *  P  F  L  W  C  I  V  L  A  *  A  T  A  *  L  I  Y  H  L  C  I  *  Q </first_frame>
            <second_frame>  S  L  E  R  S  S  P  C  R  S  L  Q  K  L  V  L  *  L  E  M  R  V  I  Y  H  I  G  K  E  A  V  D  R  K  L  V  K  L  C  S  S  L  A  Y  L  R  I  R  S  M  R  R  *  L  N  R  K  H  E  W  F  P  L  T  F  *  T  Q  G  M  E  K  L  K  V  V  D  *  K  L  V  K  L  C  S  S  L  A  Y  L  K  I  R  S  M  R  R  *  L  N  R  K  H  E  R  F  A  L  T  F  *  T  Q  G  M  E  K  L  K  *  K  K  A  G  L  *  N  V  *  R  K  E  M  I  K  N  Y  E  P  K  F  E  W  F  P  L  T  L  L  T  *  K  W  E  K  K  *  R  *  V  R  I  V  Q  T  L  R  R  T  V  S  M  E  E  R  F  L  P  T  F  R  M  H  I  V  K  R  R  R  V  Q  *  V  Q  K  D  R  N  L  V  S  L  L  P  R  K  E  T  R  H  I  *  G  G  V  K  I  T  C  G  Y  L  L  D  P  I  L  I  S  S  K  K  T  M  L  M  I  L  G  G  C  W  L  F  A  C  F  *  I  A  P  P  V  C  R :   L  G  E  W  *  T  S  F  S  L  C  V  Q  M  L  W  Q  Q  Q  R  L  L  *  R  I  *  K  S  C  C  D  L  *  D  Y  I  Q  R  G  H  C  L  F  R  V  S  L  K  N  I  L  E  K  I  G  L  M  S  H  S  C  M  V  L  A   : S  M  Q  L  M  H  M  Q  Y  F  V  R  A  I  G  I  K  Y  I  Q  M  I  T  C  *  Q  N  T  G  N  S  C  M  Q  M  A  R  P  Q  P  E  G  A  M  Y  L  P  E  D  D  A  *  L  G  Y  L  L  G  V  S  C  I  F  S  V  D  *  P  L  D  H  F  C  G  V  *  Y  L  P  K  Q  Q  L  N  *  Y  I  I  S  A  Y  D   </second_frame>
            <third_frame>   L  S  N  A  H  L  H  A  E  V  F  R  N  W  F  Y  D  W  K  *  E  S  F  I  T  L  G  R  R  L  W  T  E  S  W  *  N  C  V  R  A  L  L  I  S  E  S  D  Q  *  E  D  D  *  T  E  S  T  S  G  F  P  L  L  F  E  L  K  E  W  R  N  *  R  L  W  T  E  S  W  *  N  C  V  R  A  L  L  I  S  K  S  D  Q  *  E  D  D  *  T  E  S  T  S  G  L  P  L  L  F  E  L  K  E  W  R  N  *  N  E  K  R  Q  V  C  R  M  C  E  E  K  K  *  *  K  I  T  N  Q  S  S  S  G  F  P  L  L  C  *  L  K  S  G  R  R  N  K  G  R  *  G  *  F  K  R  F  E  E  L  S  Q  W  K  K  G  F  S  L  L  S  E  C  I  S  *  K  E  E  E  Y  N  R  F  K  K  T  E  T  L  S  L  C  F  P  E  K  R  R  G  I  F  K  E  E  *  R  *  H  V  G  T  S  S  I  P  F  *  S  P  P  R  K  P  C  S  *  S  L  E  G  V  G  Y  L  H  A  F  E  L  H  H  R  C  A   : G  *  E  S  G  R  R  V  F  H  S  V  S  K  C  C  G  S  N  R  G  C  C  R  G  Y  R  K  V  A  A  T  F  R  I  I  Y  K  E  V  T  V  Y  S  A  S  L  S  R  I  S  W  K  K  L  D  S  C  H  T  A  A  W  Y  W  Q  :  V  C  S  *  C  I  C  N  I  L  Y  G  Q  L  G  S  S  T  S  K  *  S  H  A  N  K  I  L  G  I  P  A  C  K  W  L  G  L  N  L  R  V  Q  C  I  Y  L  K  M  M  H  S  *  G  I  F  W  G  S  V  A  Y  F  R  *  I  N  L  L  T  I  F  V  V  Y  S  T  C  L  S  N  S  L  I  N  I  S  S  L  H  M  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64488" stop="63724"/>
                    <exon start="63274" stop="63078"/>
                    <exon start="63004" stop="62884"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1080</number_coding_nucleotides>
                  <number_encoded_amino_acids>360</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSRTLISMQKSSETGSMIGNESHLSHWEGGCGPKAGKTVFEPCLSQNQINEKMIEQKARVVSPYFLNSRNGETEGCGLKAGKTVFEPCLSQNQINEKMIEQKARAVCPYFLNSRNGETEMKKGRSVECVKKRNDKKLRTKVRVVSPYFANLKVGEEIKVGKDSSNASKNCLNGRKVSPYFQNAYREKKKSTIGSKRQKPCLSASQKRDEAYLRRSEDNMWVPPRSHFNLLQENHAHDPWRVLVICMLLNCTTGVQVRRVVDEFFTLCPNAVAATEVAVEDIEKLLRPLGLYTKRSLSIPRLSQEYLGKNWTHVTQLHGIGKYAADAYAIFCTGNWDQVHPNDHMLTKYWEFLHANGSAST*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="66685" PGL_stop="64586"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66685" e_stop="66572"/>
            <exon e_start="65049" e_stop="64586"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.909" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="66685" e_stop="66572" e_length="114"/>
          </exon>
          <intron i_serial="1" don_prob="0.909" acc_prob="0.993">
            <gDNA_intron_boundary i_start="66571" i_stop="65050" i_length="1522"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="65049" e_stop="64586" e_length="464"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66685" stop="66572"/>
              <exon start="65049" stop="64586"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318016" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTTTTGCAAAAGGAATCAGCGCCTCTCCGTTTTCATACTGCCCTAATCGTTTGTACTGATACGATATCACAACAATTTTGTTGGAGCTAGCTTCTCTTTCTCTTCTCTTCAAG : GATGCAAGTATGGATGGGAGGCAGGATAATAAAGGAAAGAAGAGAAGGAAGAAGCACAGGGAGAAATATTATGAAGAGGAAGGAAAAATTGTGAAATCTTCCCCGTATTTTAAGAAAGTGCCTGACCATGAGGATATTGGAAGTAGTAAATCCATTGAAGCTTTTTCTGATTTGTATATGAAGCCTATCAAGAGTGAGTGCATGGTTACTGTTGAAACACATCAGATGAGTAACAAAAGGAAGAGAAAAAAGAATTCTGAACGTGTTGATGACGAGAAATCAGGAAATGATAACAGAGAAATGGATGCCGAACCAGTCTTGATTGGTCCTCCTGTTACAAATTTGGAAGTTATTAATGAGAAGGAGAATAAACAATTTGGTGATTTAGATGAGGGATGTTCTAGTGTTGCTTCAATTTCAGTTGTTCGTGGTGATAATGCAGTGGCCATTAGTCTTGATGATCT</gDNA_template>
            <first_frame> G  F  A  K  G  I  S  A  S  P  F  S  Y  C  P  N  R  L  Y  *  Y  D  I  T  T  I  L  L  E  L  A  S  L  S  L  L  F  K  :  D  A  S  M  D  G  R  Q  D  N  K  G  K  K  R  R  K  K  H  R  E  K  Y  Y  E  E  E  G  K  I  V  K  S  S  P  Y  F  K  K  V  P  D  H  E  D  I  G  S  S  K  S  I  E  A  F  S  D  L  Y  M  K  P  I  K  S  E  C  M  V  T  V  E  T  H  Q  M  S  N  K  R  K  R  K  K  N  S  E  R  V  D  D  E  K  S  G  N  D  N  R  E  M  D  A  E  P  V  L  I  G  P  P  V  T  N  L  E  V  I  N  E  K  E  N  K  Q  F  G  D  L  D  E  G  C  S  S  V  A  S  I  S  V  V  R  G  D  N  A  V  A  I  S  L  D  D   </first_frame>
            <second_frame>  V  L  Q  K  E  S  A  P  L  R  F  H  T  A  L  I  V  C  T  D  T  I  S  Q  Q  F  C  W  S  *  L  L  F  L  F  S  S  R :   M  Q  V  W  M  G  G  R  I  I  K  E  R  R  E  G  R  S  T  G  R  N  I  M  K  R  K  E  K  L  *  N  L  P  R  I  L  R  K  C  L  T  M  R  I  L  E  V  V  N  P  L  K  L  F  L  I  C  I  *  S  L  S  R  V  S  A  W  L  L  L  K  H  I  R  *  V  T  K  G  R  E  K  R  I  L  N  V  L  M  T  R  N  Q  E  M  I  T  E  K  W  M  P  N  Q  S  *  L  V  L  L  L  Q  I  W  K  L  L  M  R  R  R  I  N  N  L  V  I  *  M  R  D  V  L  V  L  L  Q  F  Q  L  F  V  V  I  M  Q  W  P  L  V  L  M  I  </second_frame>
            <third_frame>   F  C  K  R  N  Q  R  L  S  V  F  I  L  P  *  S  F  V  L  I  R  Y  H  N  N  F  V  G  A  S  F  S  F  S  S  L  Q   : G  C  K  Y  G  W  E  A  G  *  *  R  K  E  E  K  E  E  A  Q  G  E  I  L  *  R  G  R  K  N  C  E  I  F  P  V  F  *  E  S  A  *  P  *  G  Y  W  K  *  *  I  H  *  S  F  F  *  F  V  Y  E  A  Y  Q  E  *  V  H  G  Y  C  *  N  T  S  D  E  *  Q  K  E  E  K  K  E  F  *  T  C  *  *  R  E  I  R  K  *  *  Q  R  N  G  C  R  T  S  L  D  W  S  S  C  Y  K  F  G  S  Y  *  *  E  G  E  *  T  I  W  *  F  R  *  G  M  F  *  C  C  F  N  F  S  C  S  W  *  *  C  S  G  H  *  S  *  *  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66625" stop="66572"/>
                    <exon start="65049" stop="64588"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>516</number_coding_nucleotides>
                  <number_encoded_amino_acids>172</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YDITTILLELASLSLLFKDASMDGRQDNKGKKRRKKHREKYYEEEGKIVKSSPYFKKVPDHEDIGSSKSIEAFSDLYMKPIKSECMVTVETHQMSNKRKRKKNSERVDDEKSGNDNREMDAEPVLIGPPVTNLEVINEKENKQFGDLDEGCSSVASISVVRGDNAVAISLDD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="102391" PGL_stop="94246"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="95253" e_stop="94834"/>
            <exon e_start="94692" e_stop="94246"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.938"/>
          <exon-only e_score="0.928"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.938">
            <gDNA_exon_boundary e_start="95253" e_stop="94834" e_length="420"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="94833" i_stop="94693" i_length="141"/>
          </intron>
          <exon e_serial="2" e_score="0.928">
            <gDNA_exon_boundary e_start="94692" e_stop="94246" e_length="447"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95253" stop="94851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357559" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94865" stop="94834"/>
              <exon start="94692" stop="94487"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391780" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94864" stop="94834"/>
              <exon start="94692" stop="94246"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246710" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAATCTTCGGTGGAGGTAGGTTATGGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGAGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTGTATGCTTGCATGAATGTAATTATATAATTGTGATTATATAAGCATGATGAAGTTATTGAATCCCAAATCTTGCAAAACCCTAATCTCTTGTTAATGATGATGCCTGTGTATAAAAGAAGGCGTGATGAACTAAAATAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTGATAGAAGGAGATTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACATAGATTTAGGGGATCGG : AGTGTCATGTACCGACACAAGAGGATTAATGAATATGAGGGAGTGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATTTTAATATACTCAATCTAATTAACATAATTCCCAAATGAGTATGGTATTGAGGCTTGAGTCCTCATGTGTGAACTTGACGGTAATTGTTAATGATATAGTACTTGTTGTTGCTACATGTTGAGTATCATAGTTAATTTTATGATATTACTTGGTATATATTGATTCCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCATGTTTTGTACTGACCCCTACTTTTATGTTTTCTTCTTGTTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCTAGCCAGTCTTCGTTACTCCGGATATCAGGGTGAGCTAATGCTTCTAGCTCGGACT</gDNA_template>
            <first_frame> *  S  S  V  E  V  G  Y  G  F  S  Y  D  I  R  S  K  L  L  I  E  N  D  M  Y  *  *  Y  C  K  P  C  Y  V  L  N  C  M  L  A  *  M  *  L  Y  N  C  D  Y  I  S  M  M  K  L  L  N  P  K  S  C  K  T  L  I  S  C  *  *  *  C  L  C  I  K  E  G  V  M  N  *  N  N  E  I  D  D  A  L  V  R  K  K  A  *  *  I  D  R  R  R  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  C  H  E  P  T  R  R  F  R  G  S  G  V  T  N  R  H  I  D  L  G  D  R  :  S  V  M  Y  R  H  K  R  I  N  E  Y  E  G  V  E  C  H  V  P  T  Q  E  K  *  R  *  *  I  L  K  D  F  N  I  L  N  L  I  N  I  I  P  K  *  V  W  Y  *  G  L  S  P  H  V  *  T  *  R  *  L  L  M  I  *  Y  L  L  L  L  H  V  E  Y  H  S  *  F  Y  D  I  T  W  Y  I  L  I  P  I  L  S  W  P  M  I  S  T  Q  Y  P  C  F  V  L  T  P  T  F  M  F  S  S  C  L  F  V  E  C  S  K  R  A  V  I  F  D  S  T  V  T  L  A  S  L  R  Y  S  G  Y  Q  G  E  L  M  L  L  A  R  T </first_frame>
            <second_frame>  N  L  R  W  R  *  V  M  V  S  L  T  I  F  V  V  N  S  *  *  R  M  I  C  I  D  N  I  V  N  P  A  M  C  L  I  V  C  L  H  E  C  N  Y  I  I  V  I  I  *  A  *  *  S  Y  *  I  P  N  L  A  K  P  *  S  L  V  N  D  D  A  C  V  *  K  K  A  *  *  T  K  I  M  R  L  M  M  P  W  *  E  R  R  L  D  E  L  I  E  G  D  *  G  I  G  C  H  E  P  T  R  R  F  R  G  S  G  V  T  N  R  H  V  D  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G :   V  S  C  T  D  T  R  G  L  M  N  M  R  E  W  S  V  T  Y  R  H  K  R  N  K  D  N  E  S  *  K  I  L  I  Y  S  I  *  L  T  *  F  P  N  E  Y  G  I  E  A  *  V  L  M  C  E  L  D  G  N  C  *  *  Y  S  T  C  C  C  Y  M  L  S  I  I  V  N  F  M  I  L  L  G  I  Y  *  F  L  F  *  V  G  R  *  Y  L  L  S  T  H  V  L  Y  *  P  L  L  L  C  F  L  L  V  Y  L  W  S  A  A  N  V  P  S  S  S  T  Q  Q  *  L  *  P  V  F  V  T  P  D  I  R  V  S  *  C  F  *  L  G   </second_frame>
            <third_frame>   I  F  G  G  G  R  L  W  F  L  L  R  Y  S  *  *  T  L  N  R  E  *  Y  V  L  I  I  L  *  T  L  L  C  A  *  L  Y  A  C  M  N  V  I  I  *  L  *  L  Y  K  H  D  E  V  I  E  S  Q  I  L  Q  N  P  N  L  L  L  M  M  M  P  V  Y  K  R  R  R  D  E  L  K  *  *  D  *  *  C  L  G  K  K  E  G  L  M  N  *  *  K  E  I  R  G  S  G  V  T  N  R  H  V  D  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  C  H  E  P  T  H  R  F  R  G  S   : E  C  H  V  P  T  Q  E  D  *  *  I  *  G  S  G  V  S  R  T  D  T  R  E  I  K  I  M  N  L  E  R  F  *  Y  T  Q  S  N  *  H  N  S  Q  M  S  M  V  L  R  L  E  S  S  C  V  N  L  T  V  I  V  N  D  I  V  L  V  V  A  T  C  *  V  S  *  L  I  L  *  Y  Y  L  V  Y  I  D  S  Y  F  E  L  A  D  D  I  Y  S  V  P  M  F  C  T  D  P  Y  F  Y  V  F  F  L  F  I  C  G  V  Q  Q  T  C  R  H  L  R  L  N  S  N  S  S  Q  S  S  L  L  R  I  S  G  *  A  N  A  S  S  S  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94461" stop="94246"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FYDITWYILIPILSWPMISTQYPCFVLTPTFMFSSCLFVECSKRAVIFDSTVTLASLRYSGYQGELMLLART</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="100033" e_stop="99861"/>
            <exon e_start="99116" e_stop="98589"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.971"/>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.971">
            <gDNA_exon_boundary e_start="100033" e_stop="99861" e_length="173"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="99860" i_stop="99117" i_length="744"/>
          </intron>
          <exon e_serial="2" e_score="0.913">
            <gDNA_exon_boundary e_start="99116" e_stop="98589" e_length="528"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100033" stop="99861"/>
              <exon start="99116" stop="98589"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353359" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCACTATCCAGATATGCCACTCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAAGGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACGGCAAAATCCTTCCAAG : AAATGGTTGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCGATCTTGGATTGTAATGCTAAAACTGTGACGTTAGCCAAGCCTAGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTACTTTCTTCATGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTGAGTCGGTTTCGGTGGTCCATGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGACTTCTGTATTGATCTTGAACCGGGTACTCGCCCCATTTCTATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAGCAAGGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGGTGTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGGATGTGCATAGACTACC</gDNA_template>
            <first_frame> A  R  *  D  V  G  Q  C  I  *  G  *  V  S  C  T  I  Q  I  C  H  S  T  L  F  Q  S  T  R  A  D  S  S  F  C  E  G  V  E  V  R  V  A  D  F  S  L  T  G  S  G  Y  G  K  I  L  P  R :   N  G  *  F  *  C  N  S  G  Y  D  L  A  F  S  A  I  C  D  L  G  L  *  C  *  N  C  D  V  S  Q  A  *  D  R  S  V  S  V  G  G  *  L  H  F  Q  S  G  A  Y  H  L  L  S  S  C  *  E  N  G  *  *  R  V  F  S  F  L  G  T  S  Q  G  *  H  Y  P  S  T  F  D  *  V  G  F  G  G  P  *  V  S  G  C  V  P  C  R  S  S  W  Y  A  T  R  *  G  Y  *  L  L  Y  *  S  *  T  G  Y  S  P  H  F  Y  T  P  L  *  N  G  S  R  G  V  K  R  V  K  S  P  T  S  R  V  V  E  Q  G  L  H  *  T  K  C  I  S  L  G  C  S  G  V  V  C  K  E  E  G  W  E  F  S  D  V  H  R  L   </first_frame>
            <second_frame>  Q  G  R  M  S  V  N  A  Y  E  A  K  F  R  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  R  I  R  R  F  V  K  G  L  R  S  E  L  R  I  S  A  L  Q  V  A  A  T  A  K  S  F  Q   : E  M  V  D  F  D  V  I  L  G  M  T  W  L  S  P  Q  F  A  I  L  D  C  N  A  K  T  V  T  L  A  K  P  R  T  D  P  L  V  W  E  G  D  Y  T  S  N  P  V  R  I  I  Y  F  L  H  A  K  K  M  V  S  K  G  C  L  A  F  L  A  H  L  K  D  D  T  T  Q  V  P  S  I  E  S  V  S  V  V  H  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  C  I  D  L  E  P  G  T  R  P  I  S  I  P  P  Y  R  M  A  P  A  E  L  R  E  L  K  A  Q  L  Q  E  L  L  S  K  G  F  I  R  P  S  A  S  P  W  G  A  P  V  L  F  V  K  K  K  D  G  S  F  R  M  C  I  D  Y  </second_frame>
            <third_frame>   K  V  G  C  R  S  M  H  M  R  L  S  F  V  H  Y  P  D  M  P  L  N  F  V  S  V  H  K  S  G  F  V  V  L  *  R  G  *  G  Q  S  C  G  F  Q  P  Y  R  *  R  L  R  Q  N  P  S  K  :  K  W  L  I  L  M  *  F  W  V  *  L  G  F  L  R  N  L  R  S  W  I  V  M  L  K  L  *  R  *  P  S  L  G  Q  I  R  *  C  G  R  V  T  T  L  P  I  R  C  V  S  S  T  F  F  M  L  R  K  W  L  V  K  G  V  *  L  S  W  H  I  S  R  M  T  L  P  K  Y  L  R  L  S  R  F  R  W  S  M  S  F  W  M  C  S  L  Q  I  F  L  V  C  H  Q  I  G  I  L  T  S  V  L  I  L  N  R  V  L  A  P  F  L  Y  P  L  I  E  W  L  P  R  S  *  E  S  *  K  P  N  F  K  S  C  *  A  R  A  S  L  D  Q  V  H  L  L  G  V  L  R  C  C  L  *  R  R  R  M  G  V  F  G  C  A  *  T  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100032" stop="99861"/>
                    <exon start="99116" stop="98590"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGRMSVNAYEAKFRALSRYATQLCFSPQERIRRFVKGLRSELRISALQVAATAKSFQEMVDFDVILGMTWLSPQFAILDCNAKTVTLAKPRTDPLVWEGDYTSNPVRIIYFLHAKKMVSKGCLAFLAHLKDDTTQVPSIESVSVVHEFLDVFPADLPGMPPDRDIDFCIDLEPGTRPISIPPYRMAPAELRELKAQLQELLSKGFIRPSASPWGAPVLFVKKKDGSFRMCIDY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="100660" e_stop="100107"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.901"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.901">
            <gDNA_exon_boundary e_start="100660" e_stop="100107" e_length="554"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100660" stop="100107"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E329287" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCTAGCCCATCTGATGCCAGGGCGGTGACTCCTCCACCGACTGAGGAAGTAGTAAGAGAGGGTGAGGAAGGGGAGAATGAACAAGTGCAAAATGAGGAATTTCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCACTTATCTTAGTGGGTTGTCTGATTAGGGTCAGGCACCTCCAATGTTTTCTGCACCAACACCTCCGGTTTCAGAGTTACAACATGCAGCCACTATGGCTCCTCGTATGGATGCCTCATTGGACATAGGCGCGTTTCCACGTCTGACTACTGGGCCTATAATGACAAATGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTGAATCTGTGGATGCTTACGATTTTCTGGTTGGCTGTCATGAGCTAATACACAAGATGGGTATAGTAGAATGGTTTGGTGTTGAGTTCGTGAGTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCCTCATTCT</gDNA_template>
            <first_frame> T  *  P  I  *  C  Q  G  G  D  S  S  T  D  *  G  S  S  K  R  G  *  G  R  G  E  *  T  S  A  K  *  G  I  S  T  P  T  Y  P  R  D  D  Q  S  G  S  H  L  S  *  W  V  V  *  L  G  S  G  T  S  N  V  F  C  T  N  T  S  G  F  R  V  T  T  C  S  H  Y  G  S  S  Y  G  C  L  I  G  H  R  R  V  S  T  S  D  Y  W  A  Y  N  D  K  *  S  A  *  T  F  Q  *  V  L  E  I  E  T  S  S  L  Q  G  C  *  I  C  G  C  L  R  F  S  G  W  L  S  *  A  N  T  Q  D  G  Y  S  R  M  V  W  C  *  V  R  E  L  S  V  S  R  E  R  Q  N  V  V  A  V  T  C  *  V  S  T  N  R  G  T  T  Y  D  L  G  L  I   </first_frame>
            <second_frame>  P  S  P  S  D  A  R  A  V  T  P  P  P  T  E  E  V  V  R  E  G  E  E  G  E  N  E  Q  V  Q  N  E  E  F  P  P  Q  P  T  P  E  M  I  N  Q  V  L  T  Y  L  S  G  L  S  D  *  G  Q  A  P  P  M  F  S  A  P  T  P  P  V  S  E  L  Q  H  A  A  T  M  A  P  R  M  D  A  S  L  D  I  G  A  F  P  R  L  T  T  G  P  I  M  T  N  D  Q  H  E  L  F  S  K  F  L  K  L  K  P  P  V  F  K  G  A  E  S  V  D  A  Y  D  F  L  V  G  C  H  E  L  I  H  K  M  G  I  V  E  W  F  G  V  E  F  V  S  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  V  E  C  Q  P  T  E  A  P  P  M  T  W  A  S  F  </second_frame>
            <third_frame>   L  A  H  L  M  P  G  R  *  L  L  H  R  L  R  K  *  *  E  R  V  R  K  G  R  M  N  K  C  K  M  R  N  F  H  P  N  L  P  Q  R  *  S  I  R  F  S  L  I  L  V  G  C  L  I  R  V  R  H  L  Q  C  F  L  H  Q  H  L  R  F  Q  S  Y  N  M  Q  P  L  W  L  L  V  W  M  P  H  W  T  *  A  R  F  H  V  *  L  L  G  L  *  *  Q  M  I  S  M  N  F  S  V  S  S  *  N  *  N  L  Q  S  S  R  V  L  N  L  W  M  L  T  I  F  W  L  A  V  M  S  *  Y  T  R  W  V  *  *  N  G  L  V  L  S  S  *  V  I  S  F  K  G  T  P  K  C  G  G  G  H  M  L  S  V  N  Q  Q  R  H  H  L  *  L  G  P  H  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="-"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100491" stop="100108"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>384</number_coding_nucleotides>
                  <number_encoded_amino_acids>128</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GQAPPMFSAPTPPVSELQHAATMAPRMDASLDIGAFPRLTTGPIMTNDQHELFSKFLKLKPPVFKGAESVDAYDFLVGCHELIHKMGIVEWFGVEFVSYQFQGNAKMWWRSHVECQPTEAPPMTWASF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="102391" e_stop="101980"/>
            <exon e_start="94876" e_stop="94569"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.937"/>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.937">
            <gDNA_exon_boundary e_start="102391" e_stop="101980" e_length="412"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="101979" i_stop="94877" i_length="7103"/>
          </intron>
          <exon e_serial="2" e_score="0.925">
            <gDNA_exon_boundary e_start="94876" e_stop="94569" e_length="308"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102391" stop="101980"/>
              <exon start="94876" stop="94569"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349726" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAATCTTCGGTGGAGGTAGGTTATGGTTTCTCTTACGATATTCGTAGTAAACTCTTAATAGTGAATGATATGTATTGATAATATTGTAAACCCTGCTATGTGCTTAATTATATGCTTGCATGAATGTAATTATATAATTGTGATTATATAAGCATGATGAAGTTATTGAATCCCAAATCTTGCAAAACCCTAATCTCTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCGTGATGAACTAAAATAATGAGATTGATGATGCCTTGGTAAGAAAGAAGGCTTGATGAATTGATAGAAGGAGATTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCGGGTGTCACGAACCGACACATAGATTTAG : GGGATCGGGTGTCACGAACCGACACATAGATTTAGGGGATCGGGTGTCACAAATCGACACGTAGATTTAGGGGATCGGATGTCACGAACCGACACGTAGATTTAGAGAATCGGGTGTCACGAACCGACACGTAGATTTAGGGGATCAGAGTGTCACGTTTCGACACATAGTAGTAGGGGATCAGAGTGTCATGTACCGACACAAGAGGATTAATGAATATGAGGGAGTGGAGTGTCACGTACCGACACAAGAGAAATAAAGATAATGAATCTTGAAAGATTTTAATATACTCAATCTAATTAACATAA</gDNA_template>
            <first_frame> *  S  S  V  E  V  G  Y  G  F  S  Y  D  I  R  S  K  L  L  I  V  N  D  M  Y  *  *  Y  C  K  P  C  Y  V  L  N  Y  M  L  A  *  M  *  L  Y  N  C  D  Y  I  S  M  M  K  L  L  N  P  K  S  C  K  T  L  I  S  C  *  *  *  C  L  G  I  K  E  G  V  M  N  *  N  N  E  I  D  D  A  L  V  R  K  K  A  *  *  I  D  R  R  R  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  C  H  E  P  T  R  R  F  R  G  S  G  V  T  N  R  H  I  D  L   : G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  C  H  K  S  T  R  R  F  R  G  S  D  V  T  N  R  H  V  D  L  E  N  R  V  S  R  T  D  T  *  I  *  G  I  R  V  S  R  F  D  T  *  *  *  G  I  R  V  S  C  T  D  T  R  G  L  M  N  M  R  E  W  S  V  T  Y  R  H  K  R  N  K  D  N  E  S  *  K  I  L  I  Y  S  I  *  L  T  * </first_frame>
            <second_frame>  N  L  R  W  R  *  V  M  V  S  L  T  I  F  V  V  N  S  *  *  *  M  I  C  I  D  N  I  V  N  P  A  M  C  L  I  I  C  L  H  E  C  N  Y  I  I  V  I  I  *  A  *  *  S  Y  *  I  P  N  L  A  K  P  *  S  L  V  N  D  D  A  L  V  *  K  K  A  *  *  T  K  I  M  R  L  M  M  P  W  *  E  R  R  L  D  E  L  I  E  G  D  *  G  I  G  C  H  E  P  T  R  R  F  R  G  S  G  V  T  N  R  H  V  D  L  G  D  R  V  S  R  T  D  T  *  I  *  :  G  I  G  C  H  E  P  T  H  R  F  R  G  S  G  V  T  N  R  H  V  D  L  G  D  R  M  S  R  T  D  T  *  I  *  R  I  G  C  H  E  P  T  R  R  F  R  G  S  E  C  H  V  S  T  H  S  S  R  G  S  E  C  H  V  P  T  Q  E  D  *  *  I  *  G  S  G  V  S  R  T  D  T  R  E  I  K  I  M  N  L  E  R  F  *  Y  T  Q  S  N  *  H   </second_frame>
            <third_frame>   I  F  G  G  G  R  L  W  F  L  L  R  Y  S  *  *  T  L  N  S  E  *  Y  V  L  I  I  L  *  T  L  L  C  A  *  L  Y  A  C  M  N  V  I  I  *  L  *  L  Y  K  H  D  E  V  I  E  S  Q  I  L  Q  N  P  N  L  L  L  M  M  M  P  W  Y  K  R  R  R  D  E  L  K  *  *  D  *  *  C  L  G  K  K  E  G  L  M  N  *  *  K  E  I  R  G  S  G  V  T  N  R  H  V  D  L  G  D  R  V  S  R  T  D  T  *  I  *  G  I  G  C  H  E  P  T  H  R  F  R :   G  S  G  V  T  N  R  H  I  D  L  G  D  R  V  S  Q  I  D  T  *  I  *  G  I  G  C  H  E  P  T  R  R  F  R  E  S  G  V  T  N  R  H  V  D  L  G  D  Q  S  V  T  F  R  H  I  V  V  G  D  Q  S  V  M  Y  R  H  K  R  I  N  E  Y  E  G  V  E  C  H  V  P  T  Q  E  K  *  R  *  *  I  L  K  D  F  N  I  L  N  L  I  N  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0323C04.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="98017" PGL_stop="100656"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="98017" e_stop="100656"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.948"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.948">
            <gDNA_exon_boundary e_start="98017" e_stop="100656" e_length="2640"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98017" stop="98729"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98017" stop="98612"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98017" stop="98542"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98088" stop="98767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98088" stop="98446"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98537" stop="99195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355232" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98606" stop="99367"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98606" stop="99266"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351414" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99009" stop="99339"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352716" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99216" stop="99774"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99300" stop="100089"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356912" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99302" stop="99835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353805" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99376" stop="100073"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356209" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99937" stop="100656"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99940" stop="100603"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352401" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAATCCCTTGACAAATCGGCGATAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACACAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGCTCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACAATTCTCAAATGCTCCTCATGTTCCTTCTTACTTTTAGAGTATATCAGTATATCATCAATAAACACGATCAGAAAGAGATCAAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTGCTTCGAAAAGCAGTTTTTGGCACATTCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGAGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTCAACTGCCGGTAGTCTATGCACATCCGAAAACTCCCATCCTTCTTCTTTACAAACAACACCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCCTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATAGAAATGGGGCGAGTACCCGGTTCAAGATCAATACAGAAGTCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCATGGACCACCGAAACCGACTCAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCATGAAGAAAGTAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCTAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAATCTACATAAGTGTTGCTCCCCACAAAGTTCACCAAACAAGACCTATATACCTTTTCAACTACCACAGATCCACCCACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAATTTAGACCATTAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATACAGAAGCCATGCAATCACAAACCAGAAGATTACCTGTGATGACAGCATCAGATGTCTCCGCCTCCGATCTCCCAGGGAAAGCATAACAATGGGCCCTTTCGTTTATTTGTCCGTTGCCCCTACCATGTTGTGGTGTAGTGGCTCCAGTTTTCCCATCACCCCGGCTGTTTTGGTGACCACCATTACCTCGACCACTACGTCCTCCAGAATAACGGCCTCTACCATGACCACCTCTACCTCTAGCTATTGGGAGTCTATAACTCTGTTTGGGACAATTCCTCCTAATATGTCCAGTCTCCCCACATCCATAACACTCTCTAGAGTCAAGCATAGGTCTCTCAGAGAAGTGTTGACCGGTTTGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATGGGTTGAACTGAGTAACCTCCGGAACCCTGTCCTCTGGAGTAAGAACCATTAAACTCACCTCCCTTTCGAAACCTCTTTGCTGACGATGTCATGGTGAATTCATCTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACCACTTCTTGGAAGGATTTTGCCGTAGCCGCTACCTGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCCTTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGAGTGGCATATCTGGATAGTGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGTTAGAGAATGAGGCCCAAGTCATAGGTGGTGCCTCTGTTGGTTGACACTCAACATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAACTCACGAACTCAACACCAAACCATTCTACTATACCCATCTTGTGTATTAGCTCATGACAGCCAACCAGAAAATCGTAAGCATCCACAGATTCAGCACCCTTGAAGACTGGAGGTTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCATTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAACGCGCCTATGTCCAATGAGGCATCCATACGAGGAGCCATAGTGGCTGCATGTTGTAACTCTGAAACCGGAGGTGTTGGTGCAGAAAACATTGGAGGTGCCTGACCCTAATCAGACAACCCACTAAGATAAGTGAGAACCTGATTGATCATCTCTGGGGTAGGTTGGGGTGGAAATTCCTCATTTTGCACTTGTTCATTCTCCCCTTCCTCACCCTCTCTTACTACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTGGCATCAGATGGGCT</gDNA_template>
            <first_frame> E  S  L  D  K  S  A  I  V  A  S  *  P  N  K  A  P  Y  F  *  H  I  S  R  S  Y  T  I  L  H  C  L  N  L  R  R  I  H  H  H  S  I  L  R  N  H  V  L  Q  E  G  H  C  I  *  P  K  L  T  L  R  E  L  G  I  K  L  F  L  P  Q  H  F  Q  Y  N  S  Q  M  L  L  M  F  L  L  T  F  R  V  Y  Q  Y  I  I  N  K  H  D  Q  K  E  I  K  I  W  L  K  N  P  V  H  Q  A  H  E  R  S  R  G  I  R  K  T  K  R  H  H  Y  K  F  V  M  P  I  P  A  S  K  S  S  F  W  H  I  R  C  P  Y  F  Q  L  M  I  T  G  S  Q  V  N  L  R  E  D  T  S  T  L  *  L  I  E  Q  V  I  N  A  R  K  R  I  L  V  L  Y  G  Y  L  V  Q  L  P  V  V  Y  A  H  P  K  T  P  I  L  L  L  Y  K  Q  H  R  S  T  P  R  R  C  T  W  S  N  E  A  L  A  Q  Q  L  L  K  L  G  F  *  L  S  *  L  R  G  S  H  S  I  R  G  Y  R  N  G  A  S  T  R  F  K  I  N  T  E  V  N  I  P  I  W  W  H  T  R  K  I  C  R  E  H  I  Q  K  L  M  D  H  R  N  R  L  N  R  R  Y  L  G  S  V  I  L  E  M  C  Q  E  S  *  T  P  F  T  N  H  F  L  S  M  K  K  V  D  D  T  H  R  I  G  S  V  V  T  L  P  H  *  R  I  C  P  R  L  G  *  R  H  S  F  S  I  T  I  Q  D  R  K  L  R  R  K  P  S  H  T  Q  N  Y  I  K  I  N  H  F  *  D  N  Q  I  Y  I  S  V  A  P  H  K  V  H  Q  T  R  P  I  Y  L  F  N  Y  H  R  S  T  H  R  S  R  N  T  N  R  H  I  K  *  F  T  M  *  I  *  T  I  S  K  *  G  R  Y  I  R  K  C  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q  K  I  T  C  D  D  S  I  R  C  L  R  L  R  S  P  R  E  S  I  T  M  G  P  F  V  Y  L  S  V  A  P  T  M  L  W  C  S  G  S  S  F  P  I  T  P  A  V  L  V  T  T  I  T  S  T  T  T  S  S  R  I  T  A  S  T  M  T  T  S  T  S  S  Y  W  E  S  I  T  L  F  G  T  I  P  P  N  M  S  S  L  P  T  S  I  T  L  S  R  V  K  H  R  S  L  R  E  V  L  T  G  L  R  W  T  P  N  Y  S  L  *  *  R  L  N  G  L  N  *  V  T  S  G  T  L  S  S  G  V  R  T  I  K  L  T  S  L  S  K  P  L  C  *  R  C  H  G  E  F  I  W  L  H  S  F  H  L  Y  H  E  I  Y  H  F  L  E  G  F  C  R  S  R  Y  L  *  G  *  N  P  Q  L  *  P  Q  P  L  H  K  T  T  N  P  L  L  W  T  E  T  K  L  S  G  I  S  G  *  C  T  K  L  S  L  I  C  I  D  R  H  P  T  L  L  *  A  Q  E  L  I  P  F  P  I  P  Q  S  P  G  D  I  L  L  H  K  Q  V  R  E  *  G  P  S  H  R  W  C  L  C  W  L  T  L  N  M  *  P  P  P  H  F  G  V  P  L  K  L  I  T  H  E  L  N  T  K  P  F  Y  Y  T  H  L  V  Y  *  L  M  T  A  N  Q  K  I  V  S  I  H  R  F  S  T  L  E  D  W  R  F  Q  F  Q  E  L  T  E  K  F  M  L  I  I  C  H  Y  R  P  S  S  Q  T  W  K  R  A  Y  V  Q  *  G  I  H  T  R  S  H  S  G  C  M  L  *  L  *  N  R  R  C  W  C  R  K  H  W  R  C  L  T  L  I  R  Q  P  T  K  I  S  E  N  L  I  D  H  L  W  G  R  L  G  W  K  F  L  I  L  H  L  F  I  L  P  F  L  T  L  S  Y  Y  F  L  S  R  W  R  S  H  R  P  G  I  R  W  A </first_frame>
            <second_frame>  N  P  L  T  N  R  R  *  *  L  A  N  P  T  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  S  L  E  T  T  C  S  K  K  D  T  A  S  S  Q  N  S  H  L  E  N  L  A  *  S  F  F  S  L  N  I  S  N  T  I  L  K  C  S  S  C  S  F  L  L  L  E  Y  I  S  I  S  S  I  N  T  I  R  K  R  S  K  Y  G  L  K  I  P  F  I  K  L  M  N  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  C  P  Y  L  L  R  K  A  V  F  G  T  F  V  A  R  I  F  N  *  *  *  P  D  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  F  M  V  T  L  F  N  C  R  *  S  M  H  I  R  K  L  P  S  F  F  F  T  N  N  T  G  A  P  Q  G  D  A  L  G  L  M  K  P  L  L  N  N  S  *  S  W  A  F  N  S  L  N  S  A  G  A  I  L  *  G  G  I  E  M  G  R  V  P  G  S  R  S  I  Q  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  R  N  S  W  T  T  E  T  D  S  I  E  G  T  W  V  V  S  S  L  R  C  A  K  K  A  K  H  P  L  L  T  I  F  L  A  *  R  K  *  M  I  R  T  G  L  E  V  *  S  P  S  H  T  N  G  S  V  L  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  N  C  G  E  S  Q  V  I  P  R  I  T  S  K  S  T  I  S  K  I  T  K  S  T  *  V  L  L  P  T  K  F  T  K  Q  D  L  Y  T  F  S  T  T  T  D  P  P  T  G  V  E  T  R  I  G  I  S  S  N  S  Q  C  K  F  R  P  L  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  T  E  A  M  Q  S  Q  T  R  R  L  P  V  M  T  A  S  D  V  S  A  S  D  L  P  G  K  A  *  Q  W  A  L  S  F  I  C  P  L  P  L  P  C  C  G  V  V  A  P  V  F  P  S  P  R  L  F  W  *  P  P  L  P  R  P  L  R  P  P  E  *  R  P  L  P  *  P  P  L  P  L  A  I  G  S  L  *  L  C  L  G  Q  F  L  L  I  C  P  V  S  P  H  P  *  H  S  L  E  S  S  I  G  L  S  E  K  C  *  P  V  *  G  G  P  P  T  T  V  C  S  E  D  *  M  G  *  T  E  *  P  P  E  P  C  P  L  E  *  E  P  L  N  S  P  P  F  R  N  L  F  A  D  D  V  M  V  N  S  S  G  F  T  P  S  T  S  T  T  K  S  T  T  S  W  K  D  F  A  V  A  A  T  C  K  A  E  I  R  N  S  D  L  N  P  F  T  K  R  R  I  R  S  C  G  L  K  Q  S  *  V  A  Y  L  D  S  A  R  N  L  A  S  Y  A  L  T  D  I  L  P  C  S  R  L  K  N  S  S  L  F  L  S  L  K  V  R  G  I  Y  F  S  I  N  K  L  E  N  E  A  Q  V  I  G  G  A  S  V  G  *  H  S  T  C  D  R  H  H  I  L  A  F  P  *  N  *  *  L  T  N  S  T  P  N  H  S  T  I  P  I  L  C  I  S  S  *  Q  P  T  R  K  S  *  A  S  T  D  S  A  P  L  K  T  G  G  F  N  F  K  N  L  L  K  S  S  C  *  S  F  V  I  I  G  P  V  V  R  R  G  N  A  P  M  S  N  E  A  S  I  R  G  A  I  V  A  A  C  C  N  S  E  T  G  G  V  G  A  E  N  I  G  G  A  *  P  *  S  D  N  P  L  R  *  V  R  T  *  L  I  I  S  G  V  G  W  G  G  N  S  S  F  C  T  C  S  F  S  P  S  S  P  S  L  T  T  S  S  V  G  G  G  V  T  A  L  A  S  D  G   </second_frame>
            <third_frame>   I  P  *  Q  I  G  D  S  S  *  L  T  Q  Q  S  S  L  F  L  T  H  *  *  V  L  H  N  S  S  L  S  Q  S  *  K  D  P  P  S  L  H  P  *  K  P  R  A  P  R  R  T  L  H  L  A  K  T  H  T  *  R  T  W  H  K  A  F  S  P  S  T  F  P  I  Q  F  S  N  A  P  H  V  P  S  Y  F  *  S  I  S  V  Y  H  Q  *  T  R  S  E  R  D  Q  N  M  A  *  K  S  R  S  S  S  S  *  T  Q  Q  G  H  S  *  D  Q  K  T  S  L  Q  I  R  N  A  H  T  C  F  E  K  Q  F  L  A  H  S  L  P  V  F  S  I  D  D  N  R  I  S  S  Q  S  *  R  R  H  K  H  L  V  T  D  R  T  S  H  Q  C  E  E  E  D  T  C  S  L  W  L  P  C  S  T  A  G  S  L  C  T  S  E  N  S  H  P  S  S  L  Q  T  T  P  E  H  P  K  E  M  H  L  V  *  *  S  P  C  S  T  T  L  E  V  G  L  L  T  L  L  T  P  R  E  P  F  Y  K  G  V  *  K  W  G  E  Y  P  V  Q  D  Q  Y  R  S  Q  Y  P  Y  L  V  A  Y  Q  E  D  L  Q  G  T  H  P  E  T  H  G  P  P  K  P  T  Q  S  K  V  L  G  *  C  H  P  *  D  V  P  R  K  L  N  T  L  Y  *  P  F  S  *  H  E  E  S  R  *  Y  A  P  D  W  K  C  S  H  P  P  T  L  T  D  L  S  *  A  W  L  T  S  Q  F  *  H  Y  N  P  R  S  Q  I  A  E  K  A  K  S  Y  P  E  L  H  Q  N  Q  P  F  L  R  *  P  N  L  H  K  C  C  S  P  Q  S  S  P  N  K  T  Y  I  P  F  Q  L  P  Q  I  H  P  P  E  *  K  H  E  *  A  Y  Q  V  I  H  N  V  N  L  D  H  *  Q  M  R  K  I  H  K  K  M  W  I  Q  D  Q  T  I  Q  K  P  C  N  H  K  P  E  D  Y  L  *  *  Q  H  Q  M  S  P  P  P  I  S  Q  G  K  H  N  N  G  P  F  R  L  F  V  R  C  P  Y  H  V  V  V  *  W  L  Q  F  S  H  H  P  G  C  F  G  D  H  H  Y  L  D  H  Y  V  L  Q  N  N  G  L  Y  H  D  H  L  Y  L  *  L  L  G  V  Y  N  S  V  W  D  N  S  S  *  Y  V  Q  S  P  H  I  H  N  T  L  *  S  Q  A  *  V  S  Q  R  S  V  D  R  F  E  V  D  P  Q  L  Q  S  V  V  K  T  E  W  V  E  L  S  N  L  R  N  P  V  L  W  S  K  N  H  *  T  H  L  P  F  E  T  S  L  L  T  M  S  W  *  I  H  L  A  S  L  L  P  P  L  P  R  N  L  P  L  L  G  R  I  L  P  *  P  L  P  V  R  L  K  S  A  T  L  T  S  T  P  S  Q  N  D  E  S  A  L  V  D  *  N  K  V  E  W  H  I  W  I  V  H  E  T  *  P  H  M  H  *  P  T  S  Y  L  A  L  G  S  R  T  H  P  F  S  Y  P  S  K  S  G  G  Y  T  S  P  *  T  S  *  R  M  R  P  K  S  *  V  V  P  L  L  V  D  T  Q  H  V  T  A  T  T  F  W  R  S  L  E  T  D  N  S  R  T  Q  H  Q  T  I  L  L  Y  P  S  C  V  L  A  H  D  S  Q  P  E  N  R  K  H  P  Q  I  Q  H  P  *  R  L  E  V  S  I  S  R  T  Y  *  K  V  H  A  D  H  L  S  L  *  A  Q  *  S  D  V  E  T  R  L  C  P  M  R  H  P  Y  E  E  P  *  W  L  H  V  V  T  L  K  P  E  V  L  V  Q  K  T  L  E  V  P  D  P  N  Q  T  T  H  *  D  K  *  E  P  D  *  S  S  L  G  *  V  G  V  E  I  P  H  F  A  L  V  H  S  P  L  P  H  P  L  L  L  L  P  Q  S  V  E  E  S  P  P  W  H  Q  M  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99274" stop="99702"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>426</number_coding_nucleotides>
                  <number_encoded_amino_acids>142</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GRYIRKCGSRIKQYRSHAITNQKITCDDSIRCLRLRSPRESITMGPFVYLSVAPTMLWCSGSSFPITPAVLVTTITSTTTSSRITASTMTTSTSSYWESITLFGTIPPNMSSLPTSITLSRVKHRSLREVLTGLRWTPNYSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98182" stop="98520"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>336</number_coding_nucleotides>
                  <number_encoded_amino_acids>112</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PKLTLRELGIKLFLPQHFQYNSQMLLMFLLTFRVYQYIINKHDQKEIKIWLKNPVHQAHERSRGIRKTKRHHYKFVMPIPASKSSFWHIRCPYFQLMITGSQVNLREDTSTL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99758" stop="99970"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EPLNSPPFRNLFADDVMVNSSGFTPSTSTTKSTTSWKDFAVAATCKAEIRNSDLNPFTKRRIRSCGLKQS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100450" stop="100656"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NRRCWCRKHWRCLTLIRQPTKISENLIDHLWGRLGWKFLILHLFILPFLTLSYYFLSRWRSHRPGIRWA</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="5"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98744" stop="98953"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GGIEMGRVPGSRSIQKSISLSGGIPGRSAGNTSRNSWTTETDSIEGTWVVSSLRCAKKAKHPLLTIFLA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="117240" PGL_stop="117955"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="117240" e_stop="117955"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.939"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.939">
            <gDNA_exon_boundary e_start="117240" e_stop="117955" e_length="716"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117240" stop="117955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578039" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGAGGGTCTTCGTTCCAAAACACTTCAACTCTTGGAATCTGGGTACTGGGATCACTTCTTTGAACTTCACGATGAACCTACAGGATGGACCATCATAGCCACGACGGACCGTCACAAGCTTCGTAATCCTACACTTGGTCAGACTTCCCCATCTTCCTTCAGCAGCTGCACTACGTTGCCACCTATGGACCGTCACAAGCACGACAGACCGTCATAAGCTCCGTAAGTGGTCTCCTTTGCAGTTCTTCGCTCAAAATCTCCGCATTCAGCTTTGGACAGATTTTCTGCAAAACAAAGAGAAATTTATATAAAAATTAGCACAAAAAGGTTTTTGGACACACTAAACTTAAGGAAAAAGTATTAATAATACCGTGAAACCACGGTATATCAACACCCTCAACTTAAATTTGTTGTTCGTCCTCAAGCGACACACTATGACTCACTACACAATCTTTGTACAATAGTATCCATGTTTTATCCTTTGCAATCATTTGGCTATCAATCCCGATTAATCTCATCACATCTATGCATGATATCACTATTAGGCTTGAATTTTGTGGGATCAGAACATGACACAGACTCACCACGCACTAACACCTATCCTCTTCAATTTCTCACCTGGGTGCTAACAATTCTGGTATTGCAACTAGTGTCCTCACTTTAAAACAAAATCCTCCTTTTTCACACAATGATTTCAGTTTGAGTATAAGGATTAC</gDNA_template>
            <first_frame> R  G  S  S  F  Q  N  T  S  T  L  G  I  W  V  L  G  S  L  L  *  T  S  R  *  T  Y  R  M  D  H  H  S  H  D  G  P  S  Q  A  S  *  S  Y  T  W  S  D  F  P  I  F  L  Q  Q  L  H  Y  V  A  T  Y  G  P  S  Q  A  R  Q  T  V  I  S  S  V  S  G  L  L  C  S  S  S  L  K  I  S  A  F  S  F  G  Q  I  F  C  K  T  K  R  N  L  Y  K  N  *  H  K  K  V  F  G  H  T  K  L  K  E  K  V  L  I  I  P  *  N  H  G  I  S  T  P  S  T  *  I  C  C  S  S  S  S  D  T  L  *  L  T  T  Q  S  L  Y  N  S  I  H  V  L  S  F  A  I  I  W  L  S  I  P  I  N  L  I  T  S  M  H  D  I  T  I  R  L  E  F  C  G  I  R  T  *  H  R  L  T  T  H  *  H  L  S  S  S  I  S  H  L  G  A  N  N  S  G  I  A  T  S  V  L  T  L  K  Q  N  P  P  F  S  H  N  D  F  S  L  S  I  R  I   </first_frame>
            <second_frame>  E  G  L  R  S  K  T  L  Q  L  L  E  S  G  Y  W  D  H  F  F  E  L  H  D  E  P  T  G  W  T  I  I  A  T  T  D  R  H  K  L  R  N  P  T  L  G  Q  T  S  P  S  S  F  S  S  C  T  T  L  P  P  M  D  R  H  K  H  D  R  P  S  *  A  P  *  V  V  S  F  A  V  L  R  S  K  S  P  H  S  A  L  D  R  F  S  A  K  Q  R  E  I  Y  I  K  I  S  T  K  R  F  L  D  T  L  N  L  R  K  K  Y  *  *  Y  R  E  T  T  V  Y  Q  H  P  Q  L  K  F  V  V  R  P  Q  A  T  H  Y  D  S  L  H  N  L  C  T  I  V  S  M  F  Y  P  L  Q  S  F  G  Y  Q  S  R  L  I  S  S  H  L  C  M  I  S  L  L  G  L  N  F  V  G  S  E  H  D  T  D  S  P  R  T  N  T  Y  P  L  Q  F  L  T  W  V  L  T  I  L  V  L  Q  L  V  S  S  L  *  N  K  I  L  L  F  H  T  M  I  S  V  *  V  *  G  L  </second_frame>
            <third_frame>   R  V  F  V  P  K  H  F  N  S  W  N  L  G  T  G  I  T  S  L  N  F  T  M  N  L  Q  D  G  P  S  *  P  R  R  T  V  T  S  F  V  I  L  H  L  V  R  L  P  H  L  P  S  A  A  A  L  R  C  H  L  W  T  V  T  S  T  T  D  R  H  K  L  R  K  W  S  P  L  Q  F  F  A  Q  N  L  R  I  Q  L  W  T  D  F  L  Q  N  K  E  K  F  I  *  K  L  A  Q  K  G  F  W  T  H  *  T  *  G  K  S  I  N  N  T  V  K  P  R  Y  I  N  T  L  N  L  N  L  L  F  V  L  K  R  H  T  M  T  H  Y  T  I  F  V  Q  *  Y  P  C  F  I  L  C  N  H  L  A  I  N  P  D  *  S  H  H  I  Y  A  *  Y  H  Y  *  A  *  I  L  W  D  Q  N  M  T  Q  T  H  H  A  L  T  P  I  L  F  N  F  S  P  G  C  *  Q  F  W  Y  C  N  *  C  P  H  F  K  T  K  S  S  F  F  T  Q  *  F  Q  F  E  Y  K  D  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="117607" stop="117903"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>294</number_coding_nucleotides>
                  <number_encoded_amino_acids>98</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YRETTVYQHPQLKFVVRPQATHYDSLHNLCTIVSMFYPLQSFGYQSRLISSHLCMISLLGLNFVGSEHDTDSPRTNTYPLQFLTWVLTILVLQLVSSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="117241" stop="117456"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EGLRSKTLQLLESGYWDHFFELHDEPTGWTIIATTDRHKLRNPTLGQTSPSSFSSCTTLPPMDRHKHDRPS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="117338" stop="117550"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PRRTVTSFVILHLVRLPHLPSAAALRCHLWTVTSTTDRHKLRKWSPLQFFAQNLRIQLWTDFLQNKEKFI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="130102" PGL_stop="129599"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="130102" e_stop="129599"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.938"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.938">
            <gDNA_exon_boundary e_start="130102" e_stop="129599" e_length="504"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130102" stop="129599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577845" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATCTTTTTATTTGAATTAAAACTTGATAGAAAAACATCTTCCAAGGCTACCCAGATGCTCGACGAGGTCTGGATGGAGTCGAGGTCAAGTTGCTGACGCTGATCTTTGCTTCCTTGCTTCCACTAGGGCCCCATTTCTCCTCCTCGTTGATCACGACGTTGCAAACTTTCCCCTCTTCTTTGGTTAGCGATAACCCCTTCAAGTTGTCTGAGATCTCATCAATACTGCCTCCTATGAAACCTGCTGATCGAAATGATTGATACAATGGCGGTATGGGTTTCTTCAATGGATAGTAGTACCCATCTCTAGGTGGTTGCCAATCGAGCCATTCTTCAATAGTGTACTTGTATCCCAAACGAAAAGTGGTGGAATGTCAAATAGGCTGTATAGGTTCGACTATCCCTTGCAATTCAGCCCCCAAACCCTTTCCCAAGCTCGAAACCAAACCAGGTCATCATATCTATGATTTTTTGCCTGAACCAAGGTTGCAACTCAATATTACC</gDNA_template>
            <first_frame> N  L  F  I  *  I  K  T  *  *  K  N  I  F  Q  G  Y  P  D  A  R  R  G  L  D  G  V  E  V  K  L  L  T  L  I  F  A  S  L  L  P  L  G  P  H  F  S  S  S  L  I  T  T  L  Q  T  F  P  S  S  L  V  S  D  N  P  F  K  L  S  E  I  S  S  I  L  P  P  M  K  P  A  D  R  N  D  *  Y  N  G  G  M  G  F  F  N  G  *  *  Y  P  S  L  G  G  C  Q  S  S  H  S  S  I  V  Y  L  Y  P  K  R  K  V  V  E  C  Q  I  G  C  I  G  S  T  I  P  C  N  S  A  P  K  P  F  P  K  L  E  T  K  P  G  H  H  I  Y  D  F  L  P  E  P  R  L  Q  L  N  I  T </first_frame>
            <second_frame>  I  F  L  F  E  L  K  L  D  R  K  T  S  S  K  A  T  Q  M  L  D  E  V  W  M  E  S  R  S  S  C  *  R  *  S  L  L  P  C  F  H  *  G  P  I  S  P  P  R  *  S  R  R  C  K  L  S  P  L  L  W  L  A  I  T  P  S  S  C  L  R  S  H  Q  Y  C  L  L  *  N  L  L  I  E  M  I  D  T  M  A  V  W  V  S  S  M  D  S  S  T  H  L  *  V  V  A  N  R  A  I  L  Q  *  C  T  C  I  P  N  E  K  W  W  N  V  K  *  A  V  *  V  R  L  S  L  A  I  Q  P  P  N  P  F  P  S  S  K  P  N  Q  V  I  I  S  M  I  F  C  L  N  Q  G  C  N  S  I  L   </second_frame>
            <third_frame>   S  F  Y  L  N  *  N  L  I  E  K  H  L  P  R  L  P  R  C  S  T  R  S  G  W  S  R  G  Q  V  A  D  A  D  L  C  F  L  A  S  T  R  A  P  F  L  L  L  V  D  H  D  V  A  N  F  P  L  F  F  G  *  R  *  P  L  Q  V  V  *  D  L  I  N  T  A  S  Y  E  T  C  *  S  K  *  L  I  Q  W  R  Y  G  F  L  Q  W  I  V  V  P  I  S  R  W  L  P  I  E  P  F  F  N  S  V  L  V  S  Q  T  K  S  G  G  M  S  N  R  L  Y  R  F  D  Y  P  L  Q  F  S  P  Q  T  L  S  Q  A  R  N  Q  T  R  S  S  Y  L  *  F  F  A  *  T  K  V  A  T  Q  Y  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="130072" stop="129842"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KNIFQGYPDARRGLDGVEVKLLTLIFASLLPLGPHFSSSLITTLQTFPSSLVSDNPFKLSEISSILPPMKPADRND*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129805" stop="129599"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YPSLGGCQSSHSSIVYLYPKRKVVECQIGCIGSTIPCNSAPKPFPKLETKPGHHIYDFLPEPRLQLNIT</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129845" stop="129636"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIQWRYGFLQWIVVPISRWLPIEPFFNSVLVSQTKSGGMSNRLYRFDYPLQFSPQTLSQARNQTRSSYL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="144936" PGL_stop="145525"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="144936" e_stop="145525"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.922"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.922">
            <gDNA_exon_boundary e_start="144936" e_stop="145525" e_length="590"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="144936" stop="145525"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351864" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACTGCGAAGGTGTTTCTCCCTGTATCAGACTTCCTAGTACTCCAAGCTTTGTTATTCTGGGAGATTTTCTCTAATTTTTCAGCAATCTCAGCATAAGGGCATTCTCCATAAGATCCACCTGCTATAGTGTCCAACACCACTTTGTTGTTATCATCCTGTCCCCGATAGAAGTATTCCTTCAGTGACTCATCATCTATACGGTGATTTGGAACACTTCTCATGAATGAGGTGAATCTATCCCAAGAACTACTAACTGACTCTCCTGGTAGTGCCACAAAGTTATTCACTCTGTCTTTGTGGTTTAGTTTCTTGGAGACTAGATAGTAGCGTGCCAAGAAAACATCTCTTAATTGGTTCCAAGTGAAGATTGAATTGTATGGGAGCTCAGTGAACCACATAGCCGCCTCTCCCGTCAGTGAGAGAGGAAACACTCTGAGCCCTATTACATCTAGATCCAAATCAGGCCTCCCCACACAACTTTTACACACTGCCCTTACCTTAGCTATATGGGCATGTGGATCCTCAGAAGGTAGCCCTAAAAACAAACCTGTGGCAGTGAGCATCTGCATCAGGCTACTAGTTACCACAAA</gDNA_template>
            <first_frame> T  A  K  V  F  L  P  V  S  D  F  L  V  L  Q  A  L  L  F  W  E  I  F  S  N  F  S  A  I  S  A  *  G  H  S  P  *  D  P  P  A  I  V  S  N  T  T  L  L  L  S  S  C  P  R  *  K  Y  S  F  S  D  S  S  S  I  R  *  F  G  T  L  L  M  N  E  V  N  L  S  Q  E  L  L  T  D  S  P  G  S  A  T  K  L  F  T  L  S  L  W  F  S  F  L  E  T  R  *  *  R  A  K  K  T  S  L  N  W  F  Q  V  K  I  E  L  Y  G  S  S  V  N  H  I  A  A  S  P  V  S  E  R  G  N  T  L  S  P  I  T  S  R  S  K  S  G  L  P  T  Q  L  L  H  T  A  L  T  L  A  I  W  A  C  G  S  S  E  G  S  P  K  N  K  P  V  A  V  S  I  C  I  R  L  L  V  T  T   </first_frame>
            <second_frame>  L  R  R  C  F  S  L  Y  Q  T  S  *  Y  S  K  L  C  Y  S  G  R  F  S  L  I  F  Q  Q  S  Q  H  K  G  I  L  H  K  I  H  L  L  *  C  P  T  P  L  C  C  Y  H  P  V  P  D  R  S  I  P  S  V  T  H  H  L  Y  G  D  L  E  H  F  S  *  M  R  *  I  Y  P  K  N  Y  *  L  T  L  L  V  V  P  Q  S  Y  S  L  C  L  C  G  L  V  S  W  R  L  D  S  S  V  P  R  K  H  L  L  I  G  S  K  *  R  L  N  C  M  G  A  Q  *  T  T  *  P  P  L  P  S  V  R  E  E  T  L  *  A  L  L  H  L  D  P  N  Q  A  S  P  H  N  F  Y  T  L  P  L  P  *  L  Y  G  H  V  D  P  Q  K  V  A  L  K  T  N  L  W  Q  *  A  S  A  S  G  Y  *  L  P  Q  </second_frame>
            <third_frame>   C  E  G  V  S  P  C  I  R  L  P  S  T  P  S  F  V  I  L  G  D  F  L  *  F  F  S  N  L  S  I  R  A  F  S  I  R  S  T  C  Y  S  V  Q  H  H  F  V  V  I  I  L  S  P  I  E  V  F  L  Q  *  L  I  I  Y  T  V  I  W  N  T  S  H  E  *  G  E  S  I  P  R  T  T  N  *  L  S  W  *  C  H  K  V  I  H  S  V  F  V  V  *  F  L  G  D  *  I  V  A  C  Q  E  N  I  S  *  L  V  P  S  E  D  *  I  V  W  E  L  S  E  P  H  S  R  L  S  R  Q  *  E  R  K  H  S  E  P  Y  Y  I  *  I  Q  I  R  P  P  H  T  T  F  T  H  C  P  Y  L  S  Y  M  G  M  W  I  L  R  R  *  P  *  K  Q  T  C  G  S  E  H  L  H  Q  A  T  S  Y  H  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="145263" stop="145523"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>261</number_coding_nucleotides>
                  <number_encoded_amino_acids>87</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RAKKTSLNWFQVKIELYGSSVNHIAASPVSERGNTLSPITSRSKSGLPTQLLHTALTLAIWACGSSEGSPKNKPVAVSICIRLLVTT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="147748" PGL_stop="147984"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="147748" e_stop="147984"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.945"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.945">
            <gDNA_exon_boundary e_start="147748" e_stop="147984" e_length="237"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="147748" stop="147984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209683" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAATAAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTATAACCAAGGGTTATGGTAACAATAAATGTTGCATGCTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTTTCTATTTTGAGTTGACCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATTGTTTTCTTCTTGTTTATTTGTG</gDNA_template>
            <first_frame> *  *  T  K  F  P  N  E  Y  D  E  E  V  *  V  L  I  D  V  L  G  V  I  T  K  G  Y  G  N  N  K  C  C  M  L  R  I  L  V  D  F  M  I  L  L  N  T  Y  C  F  L  F  *  V  D  R  *  Y  L  L  S  T  R  V  L  Y  *  P  L  L  L  L  F  S  S  C  L  F  V </first_frame>
            <second_frame>  N  K  L  N  S  Q  M  S  M  M  R  R  C  E  S  S  L  M  C  L  V  L  *  P  R  V  M  V  T  I  N  V  A  C  *  G  Y  *  L  I  L  *  Y  C  L  I  H  T  V  F  Y  F  E  L  T  D  D  I  Y  S  V  P  V  F  C  T  D  P  Y  F  Y  C  F  L  L  V  Y  L   </second_frame>
            <third_frame>   I  N  *  I  P  K  *  V  *  *  G  G  V  S  P  H  *  C  A  W  C  Y  N  Q  G  L  W  *  Q  *  M  L  H  A  K  D  I  S  *  F  Y  D  I  A  *  Y  I  L  F  S  I  L  S  *  P  M  I  S  T  Q  Y  P  C  F  V  L  T  P  T  F  I  V  F  F  L  F  I  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0323C04.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="148394" PGL_stop="148679"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="148394" e_stop="148679"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="148394" e_stop="148679" e_length="286"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="148394" stop="148679"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355114" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGAGTCTTAAGAAACGGTAGGGGGACGCCTTTACTGTTCCTTAAGAGGCTATAAGACTTTAGGAAAATTTCACTCTTTCATTCTTCCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACGAATTGGTATCTGACCATCTTCACTCTCTTTCGCAGATGGTTAGAACTAGAGAAATGACTACGCCAACACCAACACCGGCCAGACAAGAAACAACTGAGCCAGCCACTGGGGCTGTGG</gDNA_template>
            <first_frame> L  G  S  L  V  S  S  H  K  N  R  S  S  R  V  L  R  N  G  R  G  T  P  L  L  F  L  K  R  L  *  D  F  R  K  I  S  L  F  H  S  S  F  R  A  T  T  *  V  Q  L  V  S  R  R  Y  E  L  V  S  D  H  L  H  S  L  S  Q  M  V  R  T  R  E  M  T  T  P  T  P  T  P  A  R  Q  E  T  T  E  P  A  T  G  A  V  </first_frame>
            <second_frame>  *  V  R  W  S  H  H  T  R  T  G  L  V  E  S  *  E  T  V  G  G  R  L  Y  C  S  L  R  G  Y  K  T  L  G  K  F  H  S  F  I  L  P  F  V  L  L  L  E  S  N  W  Y  L  G  D  T  N  W  Y  L  T  I  F  T  L  F  R  R  W  L  E  L  E  K  *  L  R  Q  H  Q  H  R  P  D  K  K  Q  L  S  Q  P  L  G  L  W </second_frame>
            <third_frame>   R  F  V  G  L  I  T  Q  E  Q  V  *  *  S  L  K  K  R  *  G  D  A  F  T  V  P  *  E  A  I  R  L  *  E  N  F  T  L  S  F  F  L  S  C  Y  Y  L  S  P  I  G  I  *  A  I  R  I  G  I  *  P  S  S  L  S  F  A  D  G  *  N  *  R  N  D  Y  A  N  T  N  T  G  Q  T  R  N  N  *  A  S  H  W  G  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0323C04.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="151345" PGL_stop="149273"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="151345" e_stop="149273"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.934"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.934">
            <gDNA_exon_boundary e_start="151345" e_stop="149273" e_length="2073"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="151345" stop="150633"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E379315" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="151345" stop="150750"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="151345" stop="150820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204434" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="151274" stop="150595"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368762" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="151274" stop="150916"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240817" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="150825" stop="150167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355232" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="150756" stop="149995"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355244" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="150756" stop="150096"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E351414" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="150353" stop="150023"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352716" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="150146" stop="149588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="150062" stop="149273"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356912" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="149986" stop="149289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356209" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATCCCTTGACAAATCGACGGTAGTAGCTAGCTAACCCAACAAAGCTCCTTATTTCTGACACATTAGTAGGTCTTACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATTCTTAGAAACCACGTGCCCCAAGAAGGACACTGCATCTAGCAAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTCAACATTTCCAATACCATTCTCAAATTCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACAAAGAGGTCCAAATACGGCTTAAAAATCCCATTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGAAGTCTTTGGCACATCCGTTGCCCGTATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACTTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTTACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATAAAGTCTTTGTTTAACAACTCTTGAAGTTGGGCTTTTAACTCTCTTAACTCCGCGGGAGCCATTCTATAAGGGGGTATCGAAATAAGGCGAGTACCCAGTTCAAGGTCAATACAGAAATCAATATCCCTATCTGGTGGCATACCAGGAAGATCTGCAGGGAACACATCCAGAAACTCACGGACCACCGAGACCGACTTAATCGAAGGTACTTGGGTAGTGTCATCCTTGAGATGTGCCAAGAAAGCTAAACACCCTTTACTAACCATTTTCTTAGCACGAAGAAAGGAGATGATACGCACCGGATTGGAAGTGTAGTCACCCTCCCACACTAACGGATCTGTCCCAGGCTTGGCTAACGTCACCGTTTTAGCATTACTATCCAAGATCGCAAATTGCGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCATCCATTTCTAAGATAACCAAATCTACATAAGTATTGCTCCCCACAAAGTTCACCAAACAAGACCTATACACCTTTTCAACTACCACAGACTCACCTACCGGAGTAGAAACACGAATAGGCATATCAAGTAATTCACAATGTAAAGTTAGACCATCAGCAAATGAGGAAGATACATAAGAAAATGTGGATCCAGGATCAAACAATATAGAAGCCATGCAATCACAAACCAAAAGATTACCTGTGATGACAGCATCAGATGCCTCCGCTTCAGACCGCCCAGGGAAAGCGTAACAATGGGCCCTATCGTTCGTCTGTCCGTTGCCCCTACCTTGTTGTGATGTAGTGGCTCCAGTTTGCCCATCACCTCGGCCGTTTTGGTGACCACCATTTCCTCGACCACCACGTCCTCCAGAATAACGGCCTCTGCCATGACCACCTCTACCTCTAACATTTGGAGGTCTGTAACTCTGTTTTTGACAATATCTCTTAATATGTCCAATCTCCCCACATCCATAGCACTCTCTGGGTTCATGCATAGGTCTCTCAGAGAAGTGTTGACCGGTCGGAGGTGGACCCCCAACTACAGTCTGTAGTGAAGACTGAATTGGTCGGACTGAGTAACTTCCCAAACTCTGTCCTCTGGTGTAAGCACCATTAAACTCACCTCCCTTTCGAAACCTTTTTGATGTCGATGACGGGGTGAAGTCGTCTGGCTTCACTCCTTCCACTTCTATCACAAAGTCTACTACCTCTTGGAAGGATTTTGCCGTTGCCGCTAGCTGTAAGGCCGAAATCCGCAATTCTGACCTCAACCCCTTCACAAACCGGCAAATTCACTCTTGTGGACTGAAACACAGTTGGGTGGCATACCGGGATAATGCACGAAACTTAGCCTCATATGCATTGACCGACATCCTACCTTGCTCTAGGCTCAAGAACTCATCCCTTTTCCTAACCCTCAAAGTTCGGGGGATATACTT</gDNA_template>
            <first_frame> E  S  L  D  K  S  T  V  V  A  S  *  P  N  K  A  P  Y  F  *  H  I  S  R  S  Y  P  I  L  H  C  L  N  L  R  R  I  H  H  H  S  I  L  R  N  H  V  P  Q  E  G  H  C  I  *  Q  K  L  T  L  R  E  L  G  I  K  L  F  L  P  Q  H  F  Q  Y  H  S  Q  I  L  F  M  F  L  L  A  L  *  V  Y  Q  Y  I  I  N  K  Y  D  H  K  E  V  Q  I  R  L  K  N  P  I  H  Q  A  H  E  R  S  R  G  I  R  K  T  K  R  H  H  Y  K  F  V  M  P  I  P  R  S  K  R  S  L  W  H  I  R  C  P  Y  F  Q  L  M  I  T  G  S  Q  V  N  L  R  E  D  T  S  T  L  *  L  I  E  Q  V  I  N  A  G  K  R  I  L  V  L  Y  G  Y  F  V  *  L  S  V  V  Y  T  H  S  K  T  P  I  L  L  L  Y  K  Q  N  R  S  T  P  R  R  C  T  W  S  N  K  V  F  V  *  Q  L  L  K  L  G  F  *  L  S  *  L  R  G  S  H  S  I  R  G  Y  R  N  K  A  S  T  Q  F  K  V  N  T  E  I  N  I  P  I  W  W  H  T  R  K  I  C  R  E  H  I  Q  K  L  T  D  H  R  D  R  L  N  R  R  Y  L  G  S  V  I  L  E  M  C  Q  E  S  *  T  P  F  T  N  H  F  L  S  T  K  K  G  D  D  T  H  R  I  G  S  V  V  T  L  P  H  *  R  I  C  P  R  L  G  *  R  H  R  F  S  I  T  I  Q  D  R  K  L  R  R  K  P  S  H  T  Q  N  Y  I  K  I  I  H  F  *  D  N  Q  I  Y  I  S  I  A  P  H  K  V  H  Q  T  R  P  I  H  L  F  N  Y  H  R  L  T  Y  R  S  R  N  T  N  R  H  I  K  *  F  T  M  *  S  *  T  I  S  K  *  G  R  Y  I  R  K  C  G  S  R  I  K  Q  Y  R  S  H  A  I  T  N  Q  K  I  T  C  D  D  S  I  R  C  L  R  F  R  P  P  R  E  S  V  T  M  G  P  I  V  R  L  S  V  A  P  T  L  L  *  C  S  G  S  S  L  P  I  T  S  A  V  L  V  T  T  I  S  S  T  T  T  S  S  R  I  T  A  S  A  M  T  T  S  T  S  N  I  W  R  S  V  T  L  F  L  T  I  S  L  N  M  S  N  L  P  T  S  I  A  L  S  G  F  M  H  R  S  L  R  E  V  L  T  G  R  R  W  T  P  N  Y  S  L  *  *  R  L  N  W  S  D  *  V  T  S  Q  T  L  S  S  G  V  S  T  I  K  L  T  S  L  S  K  P  F  *  C  R  *  R  G  E  V  V  W  L  H  S  F  H  F  Y  H  K  V  Y  Y  L  L  E  G  F  C  R  C  R  *  L  *  G  R  N  P  Q  F  *  P  Q  P  L  H  K  P  A  N  S  L  L  W  T  E  T  Q  L  G  G  I  P  G  *  C  T  K  L  S  L  I  C  I  D  R  H  P  T  L  L  *  A  Q  E  L  I  P  F  P  N  P  Q  S  S  G  D  I  L </first_frame>
            <second_frame>  N  P  L  T  N  R  R  *  *  L  A  N  P  T  K  L  L  I  S  D  T  L  V  G  L  T  Q  F  F  T  V  S  I  L  E  G  S  T  I  T  P  F  L  E  T  T  C  P  K  K  D  T  A  S  S  K  N  S  H  L  E  N  L  A  *  S  F  F  S  L  N  I  S  N  T  I  L  K  F  S  S  C  S  F  L  L  F  E  Y  T  N  I  S  S  I  N  T  I  T  K  R  S  K  Y  G  L  K  I  P  F  I  K  L  M  N  A  A  G  A  F  V  R  P  K  D  I  T  T  N  S  *  C  P  Y  L  V  R  K  E  V  F  G  T  S  V  A  R  I  F  N  *  *  *  P  D  L  K  S  I  L  E  K  T  Q  A  P  C  N  *  S  N  K  S  S  M  R  G  R  G  Y  L  F  F  M  V  T  L  F  S  C  L  *  S  I  H  I  R  K  L  P  S  F  F  F  T  N  K  I  G  A  P  Q  G  D  A  L  G  L  I  K  S  L  F  N  N  S  *  S  W  A  F  N  S  L  N  S  A  G  A  I  L  *  G  G  I  E  I  R  R  V  P  S  S  R  S  I  Q  K  S  I  S  L  S  G  G  I  P  G  R  S  A  G  N  T  S  R  N  S  R  T  T  E  T  D  L  I  E  G  T  W  V  V  S  S  L  R  C  A  K  K  A  K  H  P  L  L  T  I  F  L  A  R  R  K  E  M  I  R  T  G  L  E  V  *  S  P  S  H  T  N  G  S  V  P  G  L  A  N  V  T  V  L  A  L  L  S  K  I  A  N  C  G  E  S  Q  V  I  P  R  I  T  S  K  S  S  I  S  K  I  T  K  S  T  *  V  L  L  P  T  K  F  T  K  Q  D  L  Y  T  F  S  T  T  T  D  S  P  T  G  V  E  T  R  I  G  I  S  S  N  S  Q  C  K  V  R  P  S  A  N  E  E  D  T  *  E  N  V  D  P  G  S  N  N  I  E  A  M  Q  S  Q  T  K  R  L  P  V  M  T  A  S  D  A  S  A  S  D  R  P  G  K  A  *  Q  W  A  L  S  F  V  C  P  L  P  L  P  C  C  D  V  V  A  P  V  C  P  S  P  R  P  F  W  *  P  P  F  P  R  P  P  R  P  P  E  *  R  P  L  P  *  P  P  L  P  L  T  F  G  G  L  *  L  C  F  *  Q  Y  L  L  I  C  P  I  S  P  H  P  *  H  S  L  G  S  C  I  G  L  S  E  K  C  *  P  V  G  G  G  P  P  T  T  V  C  S  E  D  *  I  G  R  T  E  *  L  P  K  L  C  P  L  V  *  A  P  L  N  S  P  P  F  R  N  L  F  D  V  D  D  G  V  K  S  S  G  F  T  P  S  T  S  I  T  K  S  T  T  S  W  K  D  F  A  V  A  A  S  C  K  A  E  I  R  N  S  D  L  N  P  F  T  N  R  Q  I  H  S  C  G  L  K  H  S  W  V  A  Y  R  D  N  A  R  N  L  A  S  Y  A  L  T  D  I  L  P  C  S  R  L  K  N  S  S  L  F  L  T  L  K  V  R  G  I  Y   </second_frame>
            <third_frame>   I  P  *  Q  I  D  G  S  S  *  L  T  Q  Q  S  S  L  F  L  T  H  *  *  V  L  P  N  S  S  L  S  Q  S  *  K  D  P  P  S  L  H  S  *  K  P  R  A  P  R  R  T  L  H  L  A  K  T  H  T  *  R  T  W  H  K  A  F  S  P  S  T  F  P  I  P  F  S  N  S  L  H  V  P  S  C  S  L  S  I  P  I  Y  H  Q  *  I  R  S  Q  R  G  P  N  T  A  *  K  S  H  S  S  S  S  *  T  Q  Q  G  H  S  *  D  Q  K  T  S  L  Q  I  R  N  A  H  T  S  F  E  K  K  S  L  A  H  P  L  P  V  F  S  I  D  D  N  R  I  S  S  Q  S  *  R  R  H  K  H  L  V  T  D  R  T  S  H  Q  C  G  E  E  D  T  C  S  L  W  L  L  C  L  V  V  C  S  L  Y  T  F  E  N  S  H  P  S  S  L  Q  T  K  S  E  H  P  K  E  M  H  L  V  *  *  S  L  C  L  T  T  L  E  V  G  L  L  T  L  L  T  P  R  E  P  F  Y  K  G  V  S  K  *  G  E  Y  P  V  Q  G  Q  Y  R  N  Q  Y  P  Y  L  V  A  Y  Q  E  D  L  Q  G  T  H  P  E  T  H  G  P  P  R  P  T  *  S  K  V  L  G  *  C  H  P  *  D  V  P  R  K  L  N  T  L  Y  *  P  F  S  *  H  E  E  R  R  *  Y  A  P  D  W  K  C  S  H  P  P  T  L  T  D  L  S  Q  A  W  L  T  S  P  F  *  H  Y  Y  P  R  S  Q  I  A  E  K  A  K  S  Y  P  E  L  H  Q  N  H  P  F  L  R  *  P  N  L  H  K  Y  C  S  P  Q  S  S  P  N  K  T  Y  T  P  F  Q  L  P  Q  T  H  L  P  E  *  K  H  E  *  A  Y  Q  V  I  H  N  V  K  L  D  H  Q  Q  M  R  K  I  H  K  K  M  W  I  Q  D  Q  T  I  *  K  P  C  N  H  K  P  K  D  Y  L  *  *  Q  H  Q  M  P  P  L  Q  T  A  Q  G  K  R  N  N  G  P  Y  R  S  S  V  R  C  P  Y  L  V  V  M  *  W  L  Q  F  A  H  H  L  G  R  F  G  D  H  H  F  L  D  H  H  V  L  Q  N  N  G  L  C  H  D  H  L  Y  L  *  H  L  E  V  C  N  S  V  F  D  N  I  S  *  Y  V  Q  S  P  H  I  H  S  T  L  W  V  H  A  *  V  S  Q  R  S  V  D  R  S  E  V  D  P  Q  L  Q  S  V  V  K  T  E  L  V  G  L  S  N  F  P  N  S  V  L  W  C  K  H  H  *  T  H  L  P  F  E  T  F  L  M  S  M  T  G  *  S  R  L  A  S  L  L  P  L  L  S  Q  S  L  L  P  L  G  R  I  L  P  L  P  L  A  V  R  P  K  S  A  I  L  T  S  T  P  S  Q  T  G  K  F  T  L  V  D  *  N  T  V  G  W  H  T  G  I  M  H  E  T  *  P  H  M  H  *  P  T  S  Y  L  A  L  G  S  R  T  H  P  F  S  *  P  S  K  F  G  G  Y  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="149604" stop="149275"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>330</number_coding_nucleotides>
                  <number_encoded_amino_acids>110</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>APLNSPPFRNLFDVDDGVKSSGFTPSTSITKSTTSWKDFAVAASCKAEIRNSDLNPFTNRQIHSCGLKHSWVAYRDNARNLASYALTDILPCSRLKNSSLFLTLKVRGIY</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="149914" stop="149660"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CSGSSLPITSAVLVTTISSTTTSSRITASAMTTSTSNIWRSVTLFLTISLNMSNLPTSIALSGFMHRSLREVLTGRRWTPNYSL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="150618" stop="150373"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GGIEIRRVPSSRSIQKSISLSGGIPGRSAGNTSRNSRTTETDLIEGTWVVSSLRCAKKAKHPLLTIFLARRKEMIRTGLEV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="151081" stop="150842"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VYQYIINKYDHKEVQIRLKNPIHQAHERSRGIRKTKRHHYKFVMPIPRSKRSLWHIRCPYFQLMITGSQVNLREDTSTL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="149329" PGL_stop="150773"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="149329" e_stop="149501"/>
            <exon e_start="150246" e_stop="150773"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.896"/>
          <exon-only e_score="0.902"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.896">
            <gDNA_exon_boundary e_start="149329" e_stop="149501" e_length="173"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="149502" i_stop="150245" i_length="744"/>
          </intron>
          <exon e_serial="2" e_score="0.902">
            <gDNA_exon_boundary e_start="150246" e_stop="150773" e_length="528"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="149329" stop="149501"/>
              <exon start="150246" stop="150773"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353359" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAAGGTAGGATGTCGGTCAATGCATATGAGGCTAAGTTTCGTGCATTATCCCGGTATGCCACCCAACTGTGTTTCAGTCCACAAGAGTGAATTTGCCGGTTTGTGAAGGGGTTGAGGTCAGAATTGCGGATTTCGGCCTTACAGCTAGCGGCAACGGCAAAATCCTTCCAAG : AAATGGATGATTTTGATGTAATTCTGGGTATGACTTGGCTTTCTCCGCAATTTGCGATCTTGGATAGTAATGCTAAAACGGTGACGTTAGCCAAGCCTGGGACAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCAATCCGGTGCGTATCATCTCCTTTCTTCGTGCTAAGAAAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACATCTCAAGGATGACACTACCCAAGTACCTTCGATTAAGTCGGTCTCGGTGGTCCGTGAGTTTCTGGATGTGTTCCCTGCAGATCTTCCTGGTATGCCACCAGATAGGGATATTGATTTCTGTATTGACCTTGAACTGGGTACTCGCCTTATTTCGATACCCCCTTATAGAATGGCTCCCGCGGAGTTAAGAGAGTTAAAAGCCCAACTTCAAGAGTTGTTAAACAAAGACTTTATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGATTTTGTTTGTAAAGAAGAAGGATGGGAGTTTTCGAATGTGTATAGACTACA</gDNA_template>
            <first_frame> A  R  *  D  V  G  Q  C  I  *  G  *  V  S  C  I  I  P  V  C  H  P  T  V  F  Q  S  T  R  V  N  L  P  V  C  E  G  V  E  V  R  I  A  D  F  G  L  T  A  S  G  N  G  K  I  L  P  R :   N  G  *  F  *  C  N  S  G  Y  D  L  A  F  S  A  I  C  D  L  G  *  *  C  *  N  G  D  V  S  Q  A  W  D  R  S  V  S  V  G  G  *  L  H  F  Q  S  G  A  Y  H  L  L  S  S  C  *  E  N  G  *  *  R  V  F  S  F  L  G  T  S  Q  G  *  H  Y  P  S  T  F  D  *  V  G  L  G  G  P  *  V  S  G  C  V  P  C  R  S  S  W  Y  A  T  R  *  G  Y  *  F  L  Y  *  P  *  T  G  Y  S  P  Y  F  D  T  P  L  *  N  G  S  R  G  V  K  R  V  K  S  P  T  S  R  V  V  K  Q  R  L  Y  *  T  K  C  I  S  L  G  C  S  D  F  V  C  K  E  E  G  W  E  F  S  N  V  Y  R  L   </first_frame>
            <second_frame>  Q  G  R  M  S  V  N  A  Y  E  A  K  F  R  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  *  I  C  R  F  V  K  G  L  R  S  E  L  R  I  S  A  L  Q  L  A  A  T  A  K  S  F  Q   : E  M  D  D  F  D  V  I  L  G  M  T  W  L  S  P  Q  F  A  I  L  D  S  N  A  K  T  V  T  L  A  K  P  G  T  D  P  L  V  W  E  G  D  Y  T  S  N  P  V  R  I  I  S  F  L  R  A  K  K  M  V  S  K  G  C  L  A  F  L  A  H  L  K  D  D  T  T  Q  V  P  S  I  K  S  V  S  V  V  R  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  C  I  D  L  E  L  G  T  R  L  I  S  I  P  P  Y  R  M  A  P  A  E  L  R  E  L  K  A  Q  L  Q  E  L  L  N  K  D  F  I  R  P  S  A  S  P  W  G  A  P  I  L  F  V  K  K  K  D  G  S  F  R  M  C  I  D  Y  </second_frame>
            <third_frame>   K  V  G  C  R  S  M  H  M  R  L  S  F  V  H  Y  P  G  M  P  P  N  C  V  S  V  H  K  S  E  F  A  G  L  *  R  G  *  G  Q  N  C  G  F  R  P  Y  S  *  R  Q  R  Q  N  P  S  K  :  K  W  M  I  L  M  *  F  W  V  *  L  G  F  L  R  N  L  R  S  W  I  V  M  L  K  R  *  R  *  P  S  L  G  Q  I  R  *  C  G  R  V  T  T  L  P  I  R  C  V  S  S  P  F  F  V  L  R  K  W  L  V  K  G  V  *  L  S  W  H  I  S  R  M  T  L  P  K  Y  L  R  L  S  R  S  R  W  S  V  S  F  W  M  C  S  L  Q  I  F  L  V  C  H  Q  I  G  I  L  I  S  V  L  T  L  N  W  V  L  A  L  F  R  Y  P  L  I  E  W  L  P  R  S  *  E  S  *  K  P  N  F  K  S  C  *  T  K  T  L  L  D  Q  V  H  L  L  G  V  L  R  F  C  L  *  R  R  R  M  G  V  F  E  C  V  *  T  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0323C04.2" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="149420" stop="149501"/>
                    <exon start="150246" stop="150772"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>609</number_coding_nucleotides>
                  <number_encoded_amino_acids>203</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ICRFVKGLRSELRISALQLAATAKSFQEMDDFDVILGMTWLSPQFAILDSNAKTVTLAKPGTDPLVWEGDYTSNPVRIISFLRAKKMVSKGCLAFLAHLKDDTTQVPSIKSVSVVREFLDVFPADLPGMPPDRDIDFCIDLELGTRLISIPPYRMAPAELRELKAQLQELLNKDFIRPSASPWGAPILFVKKKDGSFRMCIDY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="152826" PGL_stop="152650"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="152826" e_stop="152650"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="152826" e_stop="152650" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="152826" stop="152650"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577888" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGAGTGATAGCTATTATTGTATGAAGATTCCGCTAAGGGTAAGAAGCTATCCCAATGGCCACCAAATTCTATCACACACGCACGAAGCATATCCTCAAACACTTGAATCGTTCGCTCAGACTGACCATCG</gDNA_template>
            <first_frame> L  H  L  L  P  Y  N  A  S  N  G  A  I  S  M  L  E  *  *  L  L  L  Y  E  D  S  A  K  G  K  K  L  S  Q  W  P  P  N  S  I  T  H  A  R  S  I  S  S  N  T  *  I  V  R  S  D  *  P  S </first_frame>
            <second_frame>  Y  I  S  Y  H  T  M  L  Q  M  E  P  Y  Q  C  L  S  D  S  Y  Y  C  M  K  I  P  L  R  V  R  S  Y  P  N  G  H  Q  I  L  S  H  T  H  E  A  Y  P  Q  T  L  E  S  F  A  Q  T  D  H   </second_frame>
            <third_frame>   T  S  P  T  I  Q  C  F  K  W  S  H  I  N  A  *  V  I  A  I  I  V  *  R  F  R  *  G  *  E  A  I  P  M  A  T  K  F  Y  H  T  R  T  K  H  I  L  K  H  L  N  R  S  L  R  L  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0323C04.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="154299" PGL_stop="154928"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="154299" e_stop="154582"/>
            <exon e_start="154698" e_stop="154928"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.958"/>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.958">
            <gDNA_exon_boundary e_start="154299" e_stop="154582" e_length="284"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="154583" i_stop="154697" i_length="115"/>
          </intron>
          <exon e_serial="2" e_score="0.935">
            <gDNA_exon_boundary e_start="154698" e_stop="154928" e_length="231"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="154299" stop="154582"/>
              <exon start="154698" stop="154928"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242359" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTAATCTACTTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCAGTACCAGGATAGAATATGGATCGGGTGTCACGTTCCGACACCAGGATAGAATATGGATCGAGTGCCGCGTTCCGGTACCAG : GATAGTATATTGAGGAGCGGAGTGTCACGTACCGACACGAGGGGAATAAAGATAATGAATCTTGAAATATGTTAATATATCCAATCTAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTGTAAATGCTGCATGCTAAGGATCTTAGTTGATTTTATGATATTGCTTAATACATAAT</gDNA_template>
            <first_frame> P  N  L  L  C  *  *  *  C  L  G  I  K  E  G  L  M  N  E  S  G  E  I  R  G  S  G  A  T  F  R  Y  Q  D  R  I  W  I  G  C  H  V  P  T  P  G  *  N  M  D  R  V  S  R  S  D  T  R  I  E  Y  G  S  G  A  T  F  Q  Y  Q  D  R  I  W  I  G  C  H  V  P  T  P  G  *  N  M  D  R  V  P  R  S  G  T  R :   I  V  Y  *  G  A  E  C  H  V  P  T  R  G  E  *  R  *  *  I  L  K  Y  V  N  I  S  N  L  M  N  *  I  P  K  *  V  *  *  G  G  V  S  P  H  *  C  A  W  C  C  N  Q  G  L  W  *  L  *  M  L  H  A  K  D  L  S  *  F  Y  D  I  A  *  Y  I   </first_frame>
            <second_frame>  L  I  Y  F  V  N  D  D  A  L  V  *  K  K  A  *  *  T  K  V  V  R  L  G  D  R  V  P  R  S  G  T  R  I  E  Y  G  S  G  V  T  F  R  H  Q  D  R  I  W  I  G  C  H  V  P  T  P  G  *  N  M  D  R  V  P  R  S  S  T  R  I  E  Y  G  S  G  V  T  F  R  H  Q  D  R  I  W  I  E  C  R  V  P  V  P   : G  *  Y  I  E  E  R  S  V  T  Y  R  H  E  G  N  K  D  N  E  S  *  N  M  L  I  Y  P  I  *  *  T  K  F  P  N  E  Y  D  E  E  V  *  V  L  I  D  V  L  G  V  V  T  K  G  Y  G  N  C  K  C  C  M  L  R  I  L  V  D  F  M  I  L  L  N  T  *  </second_frame>
            <third_frame>   *  S  T  L  L  M  M  M  P  W  Y  K  R  R  L  D  E  R  K  W  *  D  *  G  I  G  C  H  V  P  V  P  G  *  N  M  D  R  V  S  R  S  D  T  R  I  E  Y  G  S  G  V  T  F  R  H  Q  D  R  I  W  I  G  C  H  V  P  V  P  G  *  N  M  D  R  V  S  R  S  D  T  R  I  E  Y  G  S  S  A  A  F  R  Y  Q  :  D  S  I  L  R  S  G  V  S  R  T  D  T  R  G  I  K  I  M  N  L  E  I  C  *  Y  I  Q  S  N  E  L  N  S  Q  M  S  M  M  R  R  C  E  S  S  L  M  C  L  V  L  *  P  R  V  M  V  T  V  N  A  A  C  *  G  S  *  L  I  L  *  Y  C  L  I  H  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0323C04.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 359 chains have been computed
$ 
$ memory statistics:
$ 128392 bytes spliced alignments in total
$ 51 spliced alignments have been stored
$ 2517 bytes was the average size of a spliced alignment
$ 22736 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 1515 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 470 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:35:52
-->
