<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-28 19:40:04"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E342749" ref_strand="+" ref_description="SGN-E342749 [cTOF-7-A20]">
      <seq>aaacttggtcttgactcttctaataaatgtgaatttgttaaatatcttgaacagggtacagatgatattacaaacgataatggtataccggaactattgaactggtggagaaatcgtggagctcaatatccaaaacttagtaggatggtgaaggatgtgcttgcaattcaaggatcatcagtagcttcggaggcagctttcagcgcggcaagatttcaaattggagaccacagatattcgttagcagaagacagcctggagatatcagtgttatttagagattggataaatgctgagcgtagaaatcaaggacttccaaagttagatagtcaatttgaacttttcatagattcaactattggatgtggtagtgacgatggcatcgaaattcaagatcgtcaacgagctttaccaagaccagaagttgatcacaatcaatccctagctgagttagaaagaggatttacgggactatacaactattagtattacattcgagacatagttgaaacagaacccttcctagaaggtggctgcgtaagctatgtactctactaatagttgtaaattgaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="6135" stop="7309"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6435" g_stop="7009" g_length="575"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="575" r_length="575" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E342749" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342749" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6435" e_stop="7009"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACTTGGTCTTGACTCTTCTAATAAATGTGAATTTGTTAAATATCTTGAACAGGGTACAGATGATATTACAAACGATAATGGTATATCGGAACTATTGAACTGGTGGAGGAATCGTGGAGCTCAATATCCAAAACTTAGTAGGATGGTGAAGGATGTGCTTGCAATTCAAGGATCATCAGTAGCTTCGGAGGCAGCTTTCAGCGCGACAAGATTTCAAATTGGAGACCACAGATATTCGTTAGCAGAACACACCCTGGAGATATCAGTGTTATTTAGAGACTGGATAAATGCTGAGCGTAGAAATCAAGGACTTCCAAAGTTAGATAGTCAATTTGAACTTTTCATAGATTCAGCTATTGGATATGGTAGTGATGATGGCATCGAAATTCAAGATCGTCAACGAGCTTTACCAAGACCAGAAGTTGATCACAATCAATCCATAGCTGAGTTAGAAAGAGGATTTACGGGACTATACAACTATTAATATTACATTCGAGACATAGTTGAAACAGAACCCTTCCTAGAAGGTGGCTGCGTAAGCTATGTACTCTACTAATAGTTGTAAATTGAAAT</genome_strand>
        <mrna_strand>AAACTTGGTCTTGACTCTTCTAATAAATGTGAATTTGTTAAATATCTTGAACAGGGTACAGATGATATTACAAACGATAATGGTATACCGGAACTATTGAACTGGTGGAGAAATCGTGGAGCTCAATATCCAAAACTTAGTAGGATGGTGAAGGATGTGCTTGCAATTCAAGGATCATCAGTAGCTTCGGAGGCAGCTTTCAGCGCGGCAAGATTTCAAATTGGAGACCACAGATATTCGTTAGCAGAAGACAGCCTGGAGATATCAGTGTTATTTAGAGATTGGATAAATGCTGAGCGTAGAAATCAAGGACTTCCAAAGTTAGATAGTCAATTTGAACTTTTCATAGATTCAACTATTGGATGTGGTAGTGACGATGGCATCGAAATTCAAGATCGTCAACGAGCTTTACCAAGACCAGAAGTTGATCACAATCAATCCCTAGCTGAGTTAGAAAGAGGATTTACGGGACTATACAACTATTAGTATTACATTCGAGACATAGTTGAAACAGAACCCTTCCTAGAAGGTGGCTGCGTAAGCTATGTACTCTACTAATAGTTGTAAATTGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E367164" ref_strand="+" ref_description="SGN-E367164 [cLPT-5-J10]">
      <seq>ggttattcactatgatgttccgccgtatctaacctatcatttcttcaatcagttcaggacgccttcaaaccctaataatttcttaaagggtgtcaaatggtctcctgatggttctggtttcctcacttgctctgatgataataccttttgtttatataacttgccatatgatgaaagtggacagcttgctgatttttcctcatcagctgctgatacagattcgtatgctgcaagtcttgtcatgagtgacggggagtctgtatatgactattgctggtatccctatatgtcttcttcaagtccagagacgtgtgtttttgcaagtactacccgtgatcaccctattcatctctgggatgctactactggacagttacgctgtacataccgtgcttatgatgccatggacgagatcactgctgccttttcgattgccttcaatcccgcagggactaagatatttgctggttacaacaaatccataagaatatttgatattcatcggcctggcagagattttacccagcactccacccttcaaggaaataaagaagggcaatcaggcattatatcctcaatggctttctgtccaagccattcaaggttactggcaactggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="19471" stop="16509"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19171" g_stop="19073" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19072" i_stop="18971" i_length="102">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18970" g_stop="18908" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="162" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18907" i_stop="18421" i_length="487">
            <donor d_prob="0.672" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18420" g_stop="18365" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="218" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18364" i_stop="18185" i_length="180">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18184" g_stop="18104" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="299" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18103" i_stop="18023" i_length="81">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18022" g_stop="17949" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="373" r_length="74" r_score="0.986"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17948" i_stop="17796" i_length="153">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17795" g_stop="17713" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="456" r_length="83" r_score="0.976"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="17712" i_stop="17246" i_length="467">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.634" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="17245" g_stop="17139" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="563" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="17138" i_stop="16866" i_length="273">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.447" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="16865" g_stop="16809" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="620" r_length="57" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E367164" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E367164" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19171" e_stop="19073"/>
          <exon e_start="18970" e_stop="18908"/>
          <exon e_start="18420" e_stop="18365"/>
          <exon e_start="18184" e_stop="18104"/>
          <exon e_start="18022" e_stop="17949"/>
          <exon e_start="17795" e_stop="17713"/>
          <exon e_start="17245" e_stop="17139"/>
          <exon e_start="16865" e_stop="16809"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTATTCAGTATGATGTTCCGCCGTATCTAACCTATCATTTCTTCAATCAGTTCAGGACGCCTTCAAACCCTAATAATTTCTTAAAGGGTGTCAAATGGTATGCTTTTCTCCTCTTTTTGATTCTCCATTTCTTATGCCGTGTTTTCTCTGTTTTTTCCCTATGTAGTCTAATGGCTATTTTTTTTTCCTGGAATTATAGGTCTCCTGATGGTTCTGGTTTCCTCACTTGCTCTGATGATAATACCTTTTGTTTATATAACTTGTAAGTTTCTTCCCAGTTTCTGATGATAAATGATAAATTTCTTTGTAGGAGCAAATTAGAAATATATGAATTCGAAGTCTCGAATAACTGTTAAGCTTATATGAGTAGCTTCTCTTGTAACTTTTTGGTGATTGGATCTGCTGGGATTAAAATTTATTGACAGATAGAGTTTCATTTAACTCTGCCTGTGTGATCTTAGCTTTCCGGTCAAAGCCTGGATATCGTGAGAAAGGTTGTGGTAGGTTGATAACTAGCATTAAAAATAGTCATGATATGATGAATCATCTAAACATAGAGGGGAATGGATATAGATAATTCATATAGACAGACTCAAGGAGTTTGTGATTGAGATACATTAATTCATTGACCAGATAGTGTTTGCTGGGCTGACTATGAGGCACAATGCTGATAGTAGAAAATGGTAGTTATTCTTGCATTTCCATTGTCCTTGAGTTGCTTTGTTAATTTGGCTCTGGTTCATTGATAGGCCATATGATGAAAGTGGACAGCTTGCTGATTTTTCCTCATCAGCTGCTGATACAGGTAATATATGCTACTAGTTTATATAGGTTTGAATGTGAAGTAACATTGTGGAAGTATGCTATAGTAGATTGCTTTCAGTGTTGGAATTTGTTGATCATGTGTGTTCAATATTGAACTTGATATGATTTTCTTTCTCCTGTTTTTGTTTATTTTGATTAAACACTGACTGTTTTTTTGCAGATTCGTATGCTGCAAGTCTTGTCATGAGTGACGGGGAGTCTGTATATGACTATTGCTGGTATCCCTATATGTCTTCTTCAAGTATGTCACTCGTCTTGTTATTTTGTTATAACGCTGATGGTGATTAGAAAAAAATAACTAGAATTTGCTTTAATGCCTTAGGTCCAGAGACATGTGTTTTTGCAAGTACTACCCGTGATCACCCTATTCATCTCTGGGATGCTACTACTGGACAGGTGTGTCATTGTCTTTAAAGCTGTTGCTAAAGATGCTTTTTCCTCTCACTGCTCTTTGAAAGGTGGCTAGCAGCCCACGACTTGTGACACTGCTCAATGAGCTTTGCTAGGAAGATATTCTTCCCTACATTATCTTTTCTTGGGTGATTGCAGTTACGTTGTACATACCGTGCTTATGATGCCATGGACGAGATCACTGCTGCCTTTTCAATTGCCTTCAATCCCGCAGGGACTAAGTAAACATTCTTCTTTATCAAAGTGCTCATCTCCTTCCTTGCTCTTGTGGTCACTGTTCATGTAGAGGCACCTGTTTCATCTTTCTTTAATATTTATTTGTAGTTTTTTAAAGAGAGGAAAAAATGAGTTCTTTTGATTTATTGAGAAAGTAATCTATCCATAATTTCTGGCAGTGTGATTAGATTGACAGTAATGAGGCCTAGTTGTTAATTTAGGTGGTTGCAAGTTTTGATACTCTGTCCTCACAAAGGATCATTTTCCTATTTTGTTTTTTCATTATATTGTTTAGACTTAAAGACATGCATTTTCAGTTTTTCTTCTAGTATCTTCTTACTTCATATGCTCTATACTAACTTCTTATGTGTTATTGTGATTTGCTTCACTTTCTTTATTTATGTACTTACAGTTGTTAATATGCTAAGTTTAAACGAAAGTTTTCATTGTTACTTCATTCTTCTCGAATTAGGATATTTGCTGGTTACAACAAATCCATAAGAATATTTGATATTCATCGGCCTGGCAGAGATTTTACCCAGCACTCCACCCTTCAAGGAAATAAAGAAGGGCAATCAGGTATGTTCAGCTAGCTGCTTTTCTTTATGATCACGTTTTTAGCATTTGACTTTATAAATAAGACAATTAGCTAACAATATCTGTGTTAAACACATCAATCTGATAGTTATCTCAAAGAGAAACTATTAAGTCCTCTTGAGGCTAATTAATTTTACCACTTTTGATGCCTCCATTATTATTCATTAAACATTTATTACTCTGGCACCTTTTCTCTAATCTGTTAAGGCATTATTCCTCATTTATTATTCCAACTCCTTTTCTCTTATCTGTTAGGAATTATATCCTCAATGGCTTTCTGTCCAAGCCATTCAGGGTTATTGGCAACTGGCT</genome_strand>
        <mrna_strand>GGTTATTCACTATGATGTTCCGCCGTATCTAACCTATCATTTCTTCAATCAGTTCAGGACGCCTTCAAACCCTAATAATTTCTTAAAGGGTGTCAAATG......................................................................................................GTCTCCTGATGGTTCTGGTTTCCTCACTTGCTCTGATGATAATACCTTTTGTTTATATAACTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATATGATGAAAGTGGACAGCTTGCTGATTTTTCCTCATCAGCTGCTGATACAG....................................................................................................................................................................................ATTCGTATGCTGCAAGTCTTGTCATGAGTGACGGGGAGTCTGTATATGACTATTGCTGGTATCCCTATATGTCTTCTTCAA.................................................................................GTCCAGAGACGTGTGTTTTTGCAAGTACTACCCGTGATCACCCTATTCATCTCTGGGATGCTACTACTGGACAG.........................................................................................................................................................TTACGCTGTACATACCGTGCTTATGATGCCATGGACGAGATCACTGCTGCCTTTTCGATTGCCTTCAATCCCGCAGGGACTAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTTGCTGGTTACAACAAATCCATAAGAATATTTGATATTCATCGGCCTGGCAGAGATTTTACCCAGCACTCCACCCTTCAAGGAAATAAAGAAGGGCAATCAG.................................................................................................................................................................................................................................................................................GCATTATATCCTCAATGGCTTTCTGTCCAAGCCATTCAAGGTTACTGGCAACTGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E238443" ref_strand="+" ref_description="SGN-E238443 [cLED-17-J18]">
      <seq>cggaaacccctattgaagctgtagaagagaaaccatcggaagaaccttacccttggccggttattcagtatgatgttccgccgtatctaacctatcatttcttcaatcagttcaggacgccttcaaaccctaataatttcttaaagggtgtcaaatggtctcctgatggttctggtttcctcacttgctctgatgataataccttttgtttatataacttgccatatgatgaaagtggacagcttgctgatttttcctcatcagctgctgatacagattcgtatgctgcaagtcttgtcatgagtgacggggagtctgtatatgactattgctggtatccctatatgtcttcttcaagtccagagacatgtgtttttgcaagtactacccgtgatcaccctattcatctctgggatgctactactggacagttacgttgtacataccgtgcttatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="19529" stop="17469"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19229" g_stop="19073" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="157" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19072" i_stop="18971" i_length="102">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18970" g_stop="18908" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="220" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18907" i_stop="18421" i_length="487">
            <donor d_prob="0.672" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18420" g_stop="18365" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="276" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18364" i_stop="18185" i_length="180">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18184" g_stop="18104" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="357" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="18103" i_stop="18023" i_length="81">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18022" g_stop="17949" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="431" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="17948" i_stop="17796" i_length="153">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17795" g_stop="17769" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="458" r_length="27" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E238443" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E238443" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19229" e_stop="19073"/>
          <exon e_start="18970" e_stop="18908"/>
          <exon e_start="18420" e_stop="18365"/>
          <exon e_start="18184" e_stop="18104"/>
          <exon e_start="18022" e_stop="17949"/>
          <exon e_start="17795" e_stop="17769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAAACCCCTATTGAAGCTGTAGAAGAGAAACCATCGGAAGAACCTTACCCTTGGCCGGTTATTCAGTATGATGTTCCGCCGTATCTAACCTATCATTTCTTCAATCAGTTCAGGACGCCTTCAAACCCTAATAATTTCTTAAAGGGTGTCAAATGGTATGCTTTTCTCCTCTTTTTGATTCTCCATTTCTTATGCCGTGTTTTCTCTGTTTTTTCCCTATGTAGTCTAATGGCTATTTTTTTTTCCTGGAATTATAGGTCTCCTGATGGTTCTGGTTTCCTCACTTGCTCTGATGATAATACCTTTTGTTTATATAACTTGTAAGTTTCTTCCCAGTTTCTGATGATAAATGATAAATTTCTTTGTAGGAGCAAATTAGAAATATATGAATTCGAAGTCTCGAATAACTGTTAAGCTTATATGAGTAGCTTCTCTTGTAACTTTTTGGTGATTGGATCTGCTGGGATTAAAATTTATTGACAGATAGAGTTTCATTTAACTCTGCCTGTGTGATCTTAGCTTTCCGGTCAAAGCCTGGATATCGTGAGAAAGGTTGTGGTAGGTTGATAACTAGCATTAAAAATAGTCATGATATGATGAATCATCTAAACATAGAGGGGAATGGATATAGATAATTCATATAGACAGACTCAAGGAGTTTGTGATTGAGATACATTAATTCATTGACCAGATAGTGTTTGCTGGGCTGACTATGAGGCACAATGCTGATAGTAGAAAATGGTAGTTATTCTTGCATTTCCATTGTCCTTGAGTTGCTTTGTTAATTTGGCTCTGGTTCATTGATAGGCCATATGATGAAAGTGGACAGCTTGCTGATTTTTCCTCATCAGCTGCTGATACAGGTAATATATGCTACTAGTTTATATAGGTTTGAATGTGAAGTAACATTGTGGAAGTATGCTATAGTAGATTGCTTTCAGTGTTGGAATTTGTTGATCATGTGTGTTCAATATTGAACTTGATATGATTTTCTTTCTCCTGTTTTTGTTTATTTTGATTAAACACTGACTGTTTTTTTGCAGATTCGTATGCTGCAAGTCTTGTCATGAGTGACGGGGAGTCTGTATATGACTATTGCTGGTATCCCTATATGTCTTCTTCAAGTATGTCACTCGTCTTGTTATTTTGTTATAACGCTGATGGTGATTAGAAAAAAATAACTAGAATTTGCTTTAATGCCTTAGGTCCAGAGACATGTGTTTTTGCAAGTACTACCCGTGATCACCCTATTCATCTCTGGGATGCTACTACTGGACAGGTGTGTCATTGTCTTTAAAGCTGTTGCTAAAGATGCTTTTTCCTCTCACTGCTCTTTGAAAGGTGGCTAGCAGCCCACGACTTGTGACACTGCTCAATGAGCTTTGCTAGGAAGATATTCTTCCCTACATTATCTTTTCTTGGGTGATTGCAGTTACGTTGTACATACCGTGCTTATGAT</genome_strand>
        <mrna_strand>CGGAAACCCCTATTGAAGCTGTAGAAGAGAAACCATCGGAAGAACCTTACCCTTGGCCGGTTATTCAGTATGATGTTCCGCCGTATCTAACCTATCATTTCTTCAATCAGTTCAGGACGCCTTCAAACCCTAATAATTTCTTAAAGGGTGTCAAATG......................................................................................................GTCTCCTGATGGTTCTGGTTTCCTCACTTGCTCTGATGATAATACCTTTTGTTTATATAACTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATATGATGAAAGTGGACAGCTTGCTGATTTTTCCTCATCAGCTGCTGATACAG....................................................................................................................................................................................ATTCGTATGCTGCAAGTCTTGTCATGAGTGACGGGGAGTCTGTATATGACTATTGCTGGTATCCCTATATGTCTTCTTCAA.................................................................................GTCCAGAGACATGTGTTTTTGCAAGTACTACCCGTGATCACCCTATTCATCTCTGGGATGCTACTACTGGACAG.........................................................................................................................................................TTACGTTGTACATACCGTGCTTATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E745408" ref_strand="+" ref_description="SGN-E745408 [GI|47105670]">
      <seq>ggagtccccatttccccataacaaccaagaaaaagttgaagtgcttcatcttctcagttcaataatcaattggtgaagttggattgtatctgtttctgtgtggcagataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagccgtctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaataccaggtgttactgctggtaaagatgctggaatggcagtagttgctgtaccatctcttgcaaagcagtctcatctttatacctctgctgatgaagtgatcaattctcttctagatttgcaactagaaaagtggggactacctgcatttcaagataggatagaaggtactttgcctttagaaccttggtatataggtggtcctgtcattaagggatttgggcgcggctcaaaggttctcgggatccccacagctaatttatccccacaaggttattcagccattctttcagaacatccagcgggtgtatattttggatgggcaggactatcaggtcgaggtgtctacaagatggtcatgagcattggttggaatcctttcttcaacaatacagagaagacggttgaaccatggttgcttcatgacttcaatgaggacttctatggtgaggaattgcatctagttgttgtgggctacatacggccggaggccaacttttcgtcacttgaagccttgatagcaaaaattcacgaggacaggaagattgcagaaagagctctcgaacttcctcaatacttgaagtacaaggacgatccataccttaaaagttctctgcatcaacaaaattgatcattgaagtgttgaagttcattattgttctgattgggattgtatctgtttattctgtcctaattcctcagactacaatagtctccccatcaaaatgctctatacaataaaaagataaaaagaatttgaatgtatagctattcagaagttaaagaaccttccagggggtattagtgaatggcaaagggttcaagtgcaggatctttgtactgagaatttcaagttcctgtgtaaatgttgattaatgtaacttgttttctatctgtttataatatggaaacatgcaagctgatgcagattgtaaattgcttccttttaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="25029" stop="19430"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24731" g_stop="24647" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24646" i_stop="24030" i_length="617">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.549" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24029" g_stop="23920" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="195" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23919" i_stop="23323" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23322" g_stop="23136" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="382" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22223" g_stop="22093" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="513" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22092" i_stop="21966" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21965" g_stop="21896" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="583" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="21895" i_stop="21805" i_length="91">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="21804" g_stop="21739" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="649" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="21738" i_stop="21191" i_length="548">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="21190" g_stop="21036" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="650" r_stop="804" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="21035" i_stop="20951" i_length="85">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="20950" g_stop="20855" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="805" r_stop="900" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="20854" i_stop="20577" i_length="278">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="20576" g_stop="20425" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="901" r_stop="1052" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="20424" i_stop="20348" i_length="77">
            <donor d_prob="0.877" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="20347" g_stop="20264" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1053" r_stop="1136" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="20263" i_stop="20189" i_length="75">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="20188" g_stop="19731" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="1137" r_stop="1594" r_length="458" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1595" polyA_stop="1613"/>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E745408" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1594</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745408" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24731" e_stop="24647"/>
          <exon e_start="24029" e_stop="23920"/>
          <exon e_start="23322" e_stop="23136"/>
          <exon e_start="22223" e_stop="22093"/>
          <exon e_start="21965" e_stop="21896"/>
          <exon e_start="21804" e_stop="21739"/>
          <exon e_start="21190" e_stop="21036"/>
          <exon e_start="20950" e_stop="20855"/>
          <exon e_start="20576" e_stop="20425"/>
          <exon e_start="20347" e_stop="20264"/>
          <exon e_start="20188" e_stop="19731"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGTCCCCATTTCCCCATAACAACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATAGTAAGTCTTTATGACTGCTTTACTTGTATGACGTGTAGTCATGTACTTGATTTCTCTTCCAATTTTTGACTGGAAGCATATGCAGGGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGTGACATATGTTTCTTCTGTATTCTTGACTTCTTTGGTGTTTGTTGAAAGACAACTTTACTTTTAGGAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACATACGGCCGGAGGTATTGTGGCCTAGTTACTCTTATTTTTCCCTTTCCTTTCTTACATCACTTGCTGATATTACTGTCTATTTGCAGGCCAACTTTTCGTCACTTGAAGCCTTGATAGCAAAAATTCACGAGGACAGGAAGATTGCAGAAAGAGCTCTCGAACTTCCTCAATACTTGAAGTACAAGGACGATCCATACCTTAAAAGTTCTCTGCATCAACAAAATTGATCATTGAAGTGTTGAAGTTCATTATTGTTCTGATTGGGATTGTATCTGTTTATTCTGTCCTAATTCCTCAGACTACAATAGTCTCCCCATCAAAATGCTCTATACAATAAAAAGATAAAAAGAATTTGAATGTATAGCTATTCAGAAGTTAAAGAACCTTCCAGGGGGTATTAGTGAATGGCAAAGGGTTCAAGTGCAGGATCTTTGTACTGAGAATTTCAAGTTCCTGTGTAAATGTTGATTAATGTAACTTGTTTTCTATCTGTTTATAATATGGAAACATGCAAGCTGATGCAGATTGTAAATTGCTTCCTTTT</genome_strand>
        <mrna_strand>GGAGTCCCCATTTCCCCATAACAACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA.....................................................................................GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAG......................................................................................................................................................................................................................................................................................CTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTT.............................................................................GAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACATACGGCCGGAG...........................................................................GCCAACTTTTCGTCACTTGAAGCCTTGATAGCAAAAATTCACGAGGACAGGAAGATTGCAGAAAGAGCTCTCGAACTTCCTCAATACTTGAAGTACAAGGACGATCCATACCTTAAAAGTTCTCTGCATCAACAAAATTGATCATTGAAGTGTTGAAGTTCATTATTGTTCTGATTGGGATTGTATCTGTTTATTCTGTCCTAATTCCTCAGACTACAATAGTCTCCCCATCAAAATGCTCTATACAATAAAAAGATAAAAAGAATTTGAATGTATAGCTATTCAGAAGTTAAAGAACCTTCCAGGGGGTATTAGTGAATGGCAAAGGGTTCAAGTGCAGGATCTTTGTACTGAGAATTTCAAGTTCCTGTGTAAATGTTGATTAATGTAACTTGTTTTCTATCTGTTTATAATATGGAAACATGCAAGCTGATGCAGATTGTAAATTGCTTCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E692174" ref_strand="+" ref_description="SGN-E692174 [LH_Ea08A12]">
      <seq>tctcgtgccgaattcggcacgaggccattctttcagaaccttcagcgggtgtatattttggatgggcaggactatcaggtcaaggtgtctacaagatggtcatgagcattggttggaatcctttcttcaataacacagagaagacgattgaaccatggttgcttcatgacttcaatgaggacttctatggtgaggaattgcatctagttgttgtgggctacatacggccggaggcaaacttttcgtcacttgaagccttgatagcaaaaattcacgaggacaggaagattgcagaaagagctctcgaacttcctcaatacttgaagtacaaggacgatccataccttaaaagttctctgcatcaagaaaatcaagaaaattgatcattgaagtgttgaagttcattattgttctaattgggattgtatctgtttattctgtcctaattcctcagactacaatagtgtctccccatcaaattgcgtggaatgctctatacaataaaaagataattttttttgaatgtatagctattcagaagttaaagaaccttccagggggtattagtgaatggcaaagggttcaagtgcaggatctttgtactgagaatttcaagttcctgtgtaaatgttgattaatgtaacttgttttctgtctgtttataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="20850" stop="19474"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20549" g_stop="20425" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="149" r_length="125" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20424" i_stop="20348" i_length="77">
            <donor d_prob="0.877" d_score="0.94"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="20347" g_stop="20264" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="233" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="20263" i_stop="20189" i_length="75">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="20188" g_stop="19766" g_length="423"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="675" r_length="442" r_score="0.872"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E692174" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>632</cumulative_length_of_scored_exons>
        <coverage percentage="0.936" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E692174" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20549" e_stop="20425"/>
          <exon e_start="20347" e_stop="20264"/>
          <exon e_start="20188" e_stop="19766"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGTGACATATGTTTCTTCTGTATTCTTGACTTCTTTGGTGTTTGTTGAAAGACAACTTTACTTTTAGGAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACATACGGCCGGAGGTATTGTGGCCTAGTTACTCTTATTTTTCCCTTTCCTTTCTTACATCACTTGCTGATATTACTGTCTATTTGCAGGCCAACTTTTCGTCACTTGAAGCCTTGATAGCAAAAATTCACGAGGACAGGAAGATTGCAGAAAGAGCTCTCGAACTTCCTCAATACTTGAAGTACAAGGACGATCCATACCTTAAAAGTTCTCTGCATC-----AA-C-A--AAATTGATCATTGAAGTGTTGAAGTTCATTATTGTTCTGATTGGGATTGTATCTGTTTATTCTGTCCTAATTCCTCAGACTACAATA--GTCTCCCCATC-AA--------AATGCTCTATACAATAAAAAGATAAAAAGAATTTGAATGTATAGCTATTCAGAAGTTAAAGAACCTTCCAGGGGGTATTAGTGAATGGCAAAGGGTTCAAGTGCAGGATCTTTGTACTGAGAATTTCAAGTTCCTGTGTAAATGTTGATTAATGTAACTTGTTTTCTATCTGTTTATAATATGGAAACA</genome_strand>
        <mrna_strand>CCATTCTTTCAGAACCTTCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCAAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAATAACACAGAGAAGACGATT.............................................................................GAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACATACGGCCGGAG...........................................................................GCAAACTTTTCGTCACTTGAAGCCTTGATAGCAAAAATTCACGAGGACAGGAAGATTGCAGAAAGAGCTCTCGAACTTCCTCAATACTTGAAGTACAAGGACGATCCATACCTTAAAAGTTCTCTGCATCAAGAAAATCAAGAAAATTGATCATTGAAGTGTTGAAGTTCATTATTGTTCTAATTGGGATTGTATCTGTTTATTCTGTCCTAATTCCTCAGACTACAATAGTGTCTCCCCATCAAATTGCGTGGAATGCTCTATACAATAAAAAGAT-AATTTTTTTTGAATGTATAGCTATTCAGAAGTTAAAGAACCTTCCAGGGGGTATTAGTGAATGGCAAAGGGTTCAAGTGCAGGATCTTTGTACTGAGAATTTCAAGTTCCTGTGTAAATGTTGATTAATGTAACTTGTTTTCTGTCTGTTTATAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E703408" ref_strand="+" ref_description="SGN-E703408 [FA21BF08]">
      <seq>agagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagccgtctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaataccaggtgttactgctggtaaagatgctggaatggcagtagttgctgtaccatctcttgcaaagcagtctcatctttatacctctgctgatgaagtgatcaattctcttctagatttgcaactagaaaagtggggactacctgcatttcaagataggatagaaggtactttgcctttagaaccttggtatataggtggtcctgtcattaagggatttgggcgcggctcaaaggttctcgggatccccacagctaatttatccccacaaggttattcagccattctttcagaacatccagcgggtgtatattttggatgggcaggactatcaggtcgaggtgtctacaagatggtcatgagcattggttggaatcctttcttcaacaatacagagaagacggttgaaccatggttgcttcatgacttcaatgaggacttctatggtgaggaattgcatctagttgttgtgggctacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="23560" stop="19974"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23260" g_stop="23136" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22223" g_stop="22093" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="256" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22092" i_stop="21966" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21965" g_stop="21896" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="326" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21895" i_stop="21805" i_length="91">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21804" g_stop="21739" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="392" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="21738" i_stop="21191" i_length="548">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21190" g_stop="21036" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="547" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="21035" i_stop="20951" i_length="85">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="20950" g_stop="20855" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="548" r_stop="643" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="20854" i_stop="20577" i_length="278">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="20576" g_stop="20425" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="644" r_stop="795" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="20424" i_stop="20348" i_length="77">
            <donor d_prob="0.877" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="20347" g_stop="20274" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="796" r_stop="869" r_length="74" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E703408" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>869</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E703408" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23260" e_stop="23136"/>
          <exon e_start="22223" e_stop="22093"/>
          <exon e_start="21965" e_stop="21896"/>
          <exon e_start="21804" e_stop="21739"/>
          <exon e_start="21190" e_stop="21036"/>
          <exon e_start="20950" e_stop="20855"/>
          <exon e_start="20576" e_stop="20425"/>
          <exon e_start="20347" e_stop="20274"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATAGTAAGTCTTTATGACTGCTTTACTTGTATGACGTGTAGTCATGTACTTGATTTCTCTTCCAATTTTTGACTGGAAGCATATGCAGGGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGTGACATATGTTTCTTCTGTATTCTTGACTTCTTTGGTGTTTGTTGAAAGACAACTTTACTTTTAGGAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACAT</genome_strand>
        <mrna_strand>AGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA.....................................................................................GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAG......................................................................................................................................................................................................................................................................................CTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTT.............................................................................GAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E236449" ref_strand="+" ref_description="SGN-E236449 [cLED-13-L5]">
      <seq>cgggatccccacaggtatgcggtcttctttattccttctgctgaatggctaaaataaatgcttgactcgttatctgtgtatacttgaaatgacttgagaatttctcagaagtttgttattggaatttcagtttcttgtgagcctgtcatatcagagatattgatttttatgtcaaattattatctggattcgaactccaattgttggaggggcatggaagattagtatcttgcctcgtatgacttaacagtgatgtgtttttctattcttatggggtcaatattcttttcagctaatttatccccacaaggttattcagccattctttcagaacatccagcgggtgtatattttggatgggcaggactatcaggtcgaggtgtctacaagatggtcatgagcattggttggaatcctttcttcaacaatacagagaagacggttgtaagtgtgtcgggacatatgtttcttctgtattcttgacttctttggtgtttgttgaaagacaactttacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="21168" stop="20051"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20868" g_stop="20351" g_length="518"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="518" r_length="518" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E236449" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E236449" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20868" e_stop="20351"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGTGACATATGTTTCTTCTGTATTCTTGACTTCTTTGGTGTTTGTTGAAAGACAACTTTACTTT</genome_strand>
        <mrna_strand>CGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGGGACATATGTTTCTTCTGTATTCTTGACTTCTTTGGTGTTTGTTGAAAGACAACTTTACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E235635" ref_strand="+" ref_description="SGN-E235635 [cLED-15-M1]">
      <seq>cgggatccccacaggtatgcggtcttctttattccttctgctgaatggctaaaataaatgcttgactcgttatctgtgtatacttgaaatgacttgagaatttctcagaagtttgttattggaatttcagtttcttgtgagcctgtcatatcagagatattgatttttatgtcaaattattatctggattcgaactccaattgttggaggggcatggaagattagtatcttgcctcgtatgacttaacagtgatgtgtttttctattcttatggggtcaatattcttttcagctaatttatccccacaaggttattcagccattctttcagaacatccagcgggtgtatattttggatgggcaggactatcaggtcgaggtgtctacaagatggtcatgagcattggttggaatcctttcttcaacaatacagagaagacggttgtaagtgtgtcgtgacatatgtntcttctgtattcttgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="21168" stop="20085"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20868" g_stop="20385" g_length="484"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="484" r_length="484" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E235635" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235635" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20868" e_stop="20385"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGTGACATATGTTTCTTCTGTATTCTTGAC</genome_strand>
        <mrna_strand>CGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGTGACATATGTNTCTTCTGTATTCTTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E231386" ref_strand="+" ref_description="SGN-E231386 [cLED-10-L5]">
      <seq>cgggatccccacaggtatgcgggcttctttattccttctgctgaatggctaaaataaatgcttgactcgttatctgtgtatacttgaaatgacttgagaatttctcagaagtttggtattggaatttcaatttcttgtgagcctgtcatatcaaagatattgatttttatgtcaaattattatctggattcgaactccaattgttggaggggcatggaagattagtatcttgcctcgcatgacttaacagtgatgtgtttttctattcttatggggtcaatattcttttcagctaatttatccccacaaggttattcagccattctttcagaacatccagcgggtgtatattttggatgggcaggactatcatgtcgaggtgtctacaagatggtcatgagcattggttggaatcctttcttcaacaatacagagaagacggttgtaagtgtgtcgngacatatgtttcttctgtattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="21168" stop="20089"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20868" g_stop="20389" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="480" r_length="480" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E231386" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E231386" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20868" e_stop="20389"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGTGACATATGTTTCTTCTGTATTCT</genome_strand>
        <mrna_strand>CGGGATCCCCACAGGTATGCGGGCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGGTATTGGAATTTCAATTTCTTGTGAGCCTGTCATATCAAAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGCATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCATGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGNGACATATGTTTCTTCTGTATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E243460" ref_strand="+" ref_description="SGN-E243460 [cLED-34-O14]">
      <seq>tggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggtagagttctaacatgtattgctagagaggtatttctttccttaggaaggtattttgtgccagtccagcatgtaagatggcatttatgcttggtgctttgattgggatagtctttattttttttcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagccgtctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaatatttgcaactagaaaaggggggactacctgcatttcaagataggatagaaggtactttgcctttagaaccttggtata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="22452" stop="20615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22152" g_stop="21896" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="257" r_length="257" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21895" i_stop="21805" i_length="91">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21804" g_stop="21739" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="323" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21738" i_stop="21078" i_length="661">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21077" g_stop="21036" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="365" r_length="42" r_score="0.976"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21035" i_stop="20951" i_length="85">
            <donor d_prob="0.903" d_score="0.98"/>
            <acceptor a_prob="0.905" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="20950" g_stop="20915" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="401" r_length="36" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E243460" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243460" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22152" e_stop="21896"/>
          <exon e_start="21804" e_stop="21739"/>
          <exon e_start="21077" e_stop="21036"/>
          <exon e_start="20950" e_stop="20915"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATAGTAAGTCTTTATGACTGCTTTACTTGTATGACGTGTAGTCATGTACTTGATTTCTCTTCCAATTTTTGACTGGAAGCATATGCAGGGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATA</genome_strand>
        <mrna_strand>TGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCAACTAGAAAAGGGGGGACTACCTGCATTTCAAGATA.....................................................................................GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E264355" ref_strand="+" ref_description="SGN-E264355 [cLEG-67-E17]">
      <seq>gatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagccgtctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaataccaggtgttactgctggtaaagatgctggaatggcagtagttgctgtaccatctcttgcaaagcagtctcatctttatacctctgctgatgaagtgatcaattctcttctagatttgcaactagaaaagtggggactacctgcatttcaagataggata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="22265" stop="20733"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21965" g_stop="21896" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21895" i_stop="21805" i_length="91">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21804" g_stop="21739" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="136" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21738" i_stop="21191" i_length="548">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21190" g_stop="21036" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="291" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21035" i_stop="20951" i_length="85">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="20950" g_stop="20946" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="296" r_length="5" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E264355" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>296</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264355" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21965" e_stop="21896"/>
          <exon e_start="21804" e_stop="21739"/>
          <exon e_start="21190" e_stop="21036"/>
          <exon e_start="20950" e_stop="20946"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATAGTAAGTCTTTATGACTGCTTTACTTGTATGACGTGTAGTCATGTACTTGATTTCTCTTCCAATTTTTGACTGGAAGCATATGCAGGGATA</genome_strand>
        <mrna_strand>GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA.....................................................................................GGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E214154" ref_strand="+" ref_description="SGN-E214154 [cLEC-77-A5]">
      <seq>gaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagccgtctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaataccaggtgttactgctggtaaagatgctggaatggcagtagttgctgtaccatctcttgcaaagcagtctcatctttatacctctgctgatgaagtgatcaattctcttctagatttgcaactagaaaagtggggactacctgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="23557" stop="20746"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23257" g_stop="23136" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22223" g_stop="22093" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="253" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22092" i_stop="21966" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21965" g_stop="21896" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="323" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21895" i_stop="21805" i_length="91">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21804" g_stop="21739" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="389" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="21738" i_stop="21191" i_length="548">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21190" g_stop="21046" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="534" r_length="145" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E214154" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E214154" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23257" e_stop="23136"/>
          <exon e_start="22223" e_stop="22093"/>
          <exon e_start="21965" e_stop="21896"/>
          <exon e_start="21804" e_stop="21739"/>
          <exon e_start="21190" e_stop="21046"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCA</genome_strand>
        <mrna_strand>GAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E252181" ref_strand="+" ref_description="SGN-E252181 [cLEG-8-L1]">
      <seq>tgaagtgcttcatcttctcagttcaataatcaattggtgaagttggattataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattngattaaaaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagccgtctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaataccaggtgttactgctggtaaagatgctggaatggcagtagttgctgtaccatctcttgcaaagcagtctcatctttatacctctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="24995" stop="20803"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24695" g_stop="24647" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24646" i_stop="24009" i_length="638">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24008" g_stop="23920" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="138" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23919" i_stop="23323" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23322" g_stop="23136" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="325" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22223" g_stop="22093" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="460" r_length="135" r_score="0.939"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22092" i_stop="21966" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21965" g_stop="21896" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="530" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="21895" i_stop="21805" i_length="91">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="21804" g_stop="21739" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="531" r_stop="596" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="21738" i_stop="21191" i_length="548">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="21190" g_stop="21103" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="597" r_stop="684" r_length="88" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E252181" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E252181" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24695" e_stop="24647"/>
          <exon e_start="24008" e_stop="23920"/>
          <exon e_start="23322" e_stop="23136"/>
          <exon e_start="22223" e_stop="22093"/>
          <exon e_start="21965" e_stop="21896"/>
          <exon e_start="21804" e_stop="21739"/>
          <exon e_start="21190" e_stop="21103"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATT-GATT---AACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCT</genome_strand>
        <mrna_strand>TGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTNGATTAAAAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E251527" ref_strand="+" ref_description="SGN-E251527 [cLEG-9-M1]">
      <seq>tgaagtgcttcatcttctcagttcaataatcaattggtgaagttggattataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagccgtctccggaaatatttcttgaagcagctaaaagactcaacatggatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="24995" stop="21470"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24695" g_stop="24647" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24646" i_stop="24009" i_length="638">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24008" g_stop="23920" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="138" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23919" i_stop="23323" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23322" g_stop="23136" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="325" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22223" g_stop="22093" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="456" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22092" i_stop="21966" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21965" g_stop="21896" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="526" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="21895" i_stop="21805" i_length="91">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="21804" g_stop="21770" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="561" r_length="35" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E251527" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E251527" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24695" e_stop="24647"/>
          <exon e_start="24008" e_stop="23920"/>
          <exon e_start="23322" e_stop="23136"/>
          <exon e_start="22223" e_stop="22093"/>
          <exon e_start="21965" e_stop="21896"/>
          <exon e_start="21804" e_stop="21770"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATC</genome_strand>
        <mrna_strand>TGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E550858" ref_strand="+" ref_description="SGN-E550858 [TUS-54-B10]">
      <seq>aagtgcttcatcttctcagttcaataatcaattggtgaagttggattataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="24993" stop="21609"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24693" g_stop="24647" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="47" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24646" i_stop="24009" i_length="638">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24008" g_stop="23920" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="136" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23919" i_stop="23323" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23322" g_stop="23136" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="323" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22223" g_stop="22093" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="454" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22092" i_stop="21966" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21965" g_stop="21909" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="511" r_length="57" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E550858" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E550858" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24693" e_stop="24647"/>
          <exon e_start="24008" e_stop="23920"/>
          <exon e_start="23322" e_stop="23136"/>
          <exon e_start="22223" e_stop="22093"/>
          <exon e_start="21965" e_stop="21909"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGC</genome_strand>
        <mrna_strand>AAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E324511" ref_strand="+" ref_description="SGN-E324511 [cTOC-9-K17]">
      <seq>accaagaaaaagttgaagtgcttcatcttctcagttcaataatcaattggtgaagttggattataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="25008" stop="21610"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24708" g_stop="24647" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24646" i_stop="24009" i_length="638">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24008" g_stop="23920" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="151" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23919" i_stop="23323" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23322" g_stop="23136" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="338" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22223" g_stop="22093" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="469" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22092" i_stop="21966" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21965" g_stop="21910" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="470" r_stop="525" r_length="56" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E324511" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E324511" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24708" e_stop="24647"/>
          <exon e_start="24008" e_stop="23920"/>
          <exon e_start="23322" e_stop="23136"/>
          <exon e_start="22223" e_stop="22093"/>
          <exon e_start="21965" e_stop="21910"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAG</genome_strand>
        <mrna_strand>ACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E688590" ref_strand="+" ref_description="SGN-E688590 [t3_tus_54_B10]">
      <seq>ttgaagtgcttcatcttctcagttcaataatcaattggtgaagttggattataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="24996" stop="21611"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24696" g_stop="24647" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24646" i_stop="24009" i_length="638">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24008" g_stop="23920" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="139" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23919" i_stop="23323" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23322" g_stop="23136" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="326" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22223" g_stop="22093" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="457" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22092" i_stop="21966" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21965" g_stop="21911" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="512" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E688590" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E688590" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24696" e_stop="24647"/>
          <exon e_start="24008" e_stop="23920"/>
          <exon e_start="23322" e_stop="23136"/>
          <exon e_start="22223" e_stop="22093"/>
          <exon e_start="21965" e_stop="21911"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAA</genome_strand>
        <mrna_strand>TTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E264327" ref_strand="+" ref_description="SGN-E264327 [cLEG-70-F24]">
      <seq>aaagttgaagtgcttcatcttctcagttcaataatcaattggtgaagttggattataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="25000" stop="21632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24700" g_stop="24647" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24646" i_stop="24009" i_length="638">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24008" g_stop="23920" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="143" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23919" i_stop="23323" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23322" g_stop="23136" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="330" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22223" g_stop="22093" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="461" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22092" i_stop="21966" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21965" g_stop="21932" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="495" r_length="34" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E264327" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264327" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24700" e_stop="24647"/>
          <exon e_start="24008" e_stop="23920"/>
          <exon e_start="23322" e_stop="23136"/>
          <exon e_start="22223" e_stop="22093"/>
          <exon e_start="21965" e_stop="21932"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGG</genome_strand>
        <mrna_strand>AAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E251408" ref_strand="+" ref_description="SGN-E251408 [cLEG-9-M13]">
      <seq>tgaagtgcttcatcttctcagttcaataatcaattggtgaagttggattataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="24995" stop="21642"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24695" g_stop="24647" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24646" i_stop="24009" i_length="638">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24008" g_stop="23920" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="138" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23919" i_stop="23323" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23322" g_stop="23136" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="325" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="22223" g_stop="22093" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="456" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="22092" i_stop="21966" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="21965" g_stop="21942" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="480" r_length="24" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E251408" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E251408" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24695" e_stop="24647"/>
          <exon e_start="24008" e_stop="23920"/>
          <exon e_start="23322" e_stop="23136"/>
          <exon e_start="22223" e_stop="22093"/>
          <exon e_start="21965" e_stop="21942"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTA</genome_strand>
        <mrna_strand>TGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E273774" ref_strand="+" ref_description="SGN-E273774 [cLEN-7-F13]">
      <seq>ttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaaactgctgctgccgttgttgaaaattatgggctgccactgtcaagagatgaatttctttcccaattttacccaatgctgtctgatcaatggcgcagtatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctcaatctaacattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="23626" stop="21816"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23331" g_stop="23136" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="196" r_length="196" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912">
            <donor d_prob="0.764" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22223" g_stop="22116" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="304" r_length="108" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E273774" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>304</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E273774" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23331" e_stop="23136"/>
          <exon e_start="22223" e_stop="22116"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGA</genome_strand>
        <mrna_strand>TTAATACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAACTGCTGCTGCCGTTGTTGAAAATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCCCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCGCAGTATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTCAATCTAACATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E313806" ref_strand="+" ref_description="SGN-E313806 [cTOA-17-A11]">
      <seq>aacaaccaagattaagttgaggtgcttcatcttctcaggggaataatcaattggtgaagttggattataattgctctccatgtctgtggaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="25012" stop="23006"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24712" g_stop="24647" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="0.909"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24646" i_stop="24009" i_length="638">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.976" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24008" g_stop="23920" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="155" r_length="89" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23919" i_stop="23323" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23322" g_stop="23306" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="172" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E313806" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>172</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E313806" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24712" e_stop="24647"/>
          <exon e_start="24008" e_stop="23920"/>
          <exon e_start="23322" e_stop="23306"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAG</genome_strand>
        <mrna_strand>AACAACCAAGATTAAGTTGAGGTGCTTCATCTTCTCAGGGGAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTGGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E262485" ref_strand="+" ref_description="SGN-E262485 [cLEG-56-F20]">
      <seq>tgactgcttgtttttctttctccatcttggactgcttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaagtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49060" stop="55582"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49360" g_stop="49498" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="200" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="319" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="453" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="604" r_length="151" r_score="0.993"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55266" g_stop="55282" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="621" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E262485" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E262485" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49360" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55282"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTGCTTGTTTTTCTTTCTCCATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACAT</genome_strand>
        <mrna_strand>TGACTGCTTGTTTTTCTTTCTCCATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAAGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E262085" ref_strand="+" ref_description="SGN-E262085 [cLEG-58-G21]">
      <seq>tgactgcttgtttttctttctccatcttggactgcttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49060" stop="55170"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49360" g_stop="49498" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="200" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="319" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54870" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="442" r_length="123" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E262085" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E262085" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49360" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTGCTTGTTTTTCTTTCTCCATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTT</genome_strand>
        <mrna_strand>TGACTGCTTGTTTTTCTTTCTCCATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E746588" ref_strand="+" ref_description="SGN-E746588 [GI|47104162]">
      <seq>cccccancttggactgcttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaatcaactagagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggtccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagcgagagtgacttcttggaatatgctgagctgatctctcataagctgcgaccatttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaagaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtggtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccggttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgaggaagatcttggggccctgttacctccctattctggagtcttattgagtgtgtcatatctttttctttttattccgtcgggtcaaataagaaagtatcctttgttttgtttacattttgtggtcagttactggttggagatccattggtaaatgatttgtcggttgatctgtgttctcttgtatgattcagatctcagattttggacctatagatttcatgtaactgtcttattcaaaactatttgatcctttcttttcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49079" stop="56256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49378" g_stop="49498" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="182" r_length="61" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="0.96"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="301" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="435" r_length="134" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="586" r_length="151" r_score="0.980"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="0.96"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="587" r_stop="746" r_length="160" r_score="0.994"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="55501" g_stop="55957" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="747" r_stop="1203" r_length="457" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E746588" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>1203</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E746588" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49378" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55957"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCCATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCATAT</genome_strand>
        <mrna_strand>CCCCCAYCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATCAACTAGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGTCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGCGAGAGTGACTTCTTGGAATATGCTGAGCTGATCTCTCATAAGCTGCGACCATTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAAGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTGGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGGTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCCTGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTTTATTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCATTGGTAAATGATTTGTCGGTTGATCTGTGTTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E246132" ref_strand="+" ref_description="SGN-E246132 [cLEF-40-K2]">
      <seq>catcttggactgcttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagaatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgaatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaagcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaagcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaagtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49082" stop="55453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49382" g_stop="49498" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="179" r_length="62" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="0.96"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="299" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="433" r_length="134" r_score="0.985"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="0.98"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55153" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="566" r_length="133" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E246132" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E246132" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49382" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55153"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAG-ATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATG-ATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCAT</genome_strand>
        <mrna_strand>CATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGAATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGAATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAAGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAA...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAAGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E246339" ref_strand="+" ref_description="SGN-E246339 [cLEF-40-J2]">
      <seq>atcttggactgcttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49083" stop="55581"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49383" g_stop="49498" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="177" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="296" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="430" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="581" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55266" g_stop="55281" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="582" r_stop="597" r_length="16" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E246339" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E246339" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49383" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55281"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACA</genome_strand>
        <mrna_strand>ATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E249815" ref_strand="+" ref_description="SGN-E249815 [cLEF-57-L16]">
      <seq>atcttggactgcttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49083" stop="55452"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49383" g_stop="49498" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="177" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="296" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="430" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55152" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="562" r_length="132" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E249815" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249815" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49383" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCA</genome_strand>
        <mrna_strand>ATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E272791" ref_strand="+" ref_description="SGN-E272791 [cLEM-21-J24]">
      <seq>cttggactgcttgagcccaaggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggaccggaagagaattaactggagatggaggattgggaggatatacccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgccagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatacctaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccccggctgaattgtttgccaagaaaggtggtgatgaccagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49085" stop="55471"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49385" g_stop="49498" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="176" r_length="62" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="0.96"/>
            <acceptor a_prob="0.953" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="297" r_length="121" r_score="0.966"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="432" r_length="135" r_score="0.985"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="0.96"/>
            <acceptor a_prob="0.949" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="583" r_length="151" r_score="0.987"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55266" g_stop="55271" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="589" r_length="6" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E272791" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E272791" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49385" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55271"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGA-CGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATA-CCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATG-CAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATA-CTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGC</genome_strand>
        <mrna_strand>CTTGGACTGCTTGAGCCCAAGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACCGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACCTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCCCGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACCAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E262473" ref_strand="+" ref_description="SGN-E262473 [cLEG-56-B22]">
      <seq>cttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaatgcatatgatggttatgatgattatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49094" stop="55883"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49394" g_stop="49498" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="166" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="285" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="419" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="570" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="571" r_stop="730" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="55501" g_stop="55583" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="731" r_stop="812" r_length="82" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E262473" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>813</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E262473" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49394" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55583"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGAT</genome_strand>
        <mrna_strand>CTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGT-AATGCATATGATGGTTATGATGATTATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E260854" ref_strand="+" ref_description="SGN-E260854 [cLEG-55-M11]">
      <seq>cttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtacaagaagctgattataagtccacggctgaattgtttgcccacaaaggtggtgatgacaagaccctagaaaattttatcccaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49094" stop="55410"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49394" g_stop="49498" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="166" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="285" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="419" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55110" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="509" r_length="90" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E260854" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E260854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49394" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55110"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAA</genome_strand>
        <mrna_strand>CTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTACAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCCACAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E213166" ref_strand="+" ref_description="SGN-E213166 [cLEC-72-I14]">
      <seq>ttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagaattaagcagaaaaggaagccactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49095" stop="55707"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49395" g_stop="49498" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="165" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="284" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="418" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="569" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55266" g_stop="55406" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="570" r_stop="710" r_length="141" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E213166" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E213166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49395" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55406"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACT</genome_strand>
        <mrna_strand>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGAATTAAGCAGAAAAGGAAGCCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E316318" ref_strand="+" ref_description="SGN-E316318 [cTOA-25-E13]">
      <seq>ttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49095" stop="55702"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49395" g_stop="49498" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="165" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="284" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="418" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="569" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55266" g_stop="55402" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="570" r_stop="706" r_length="137" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E316318" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E316318" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49395" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55402"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGC</genome_strand>
        <mrna_strand>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E310377" ref_strand="+" ref_description="SGN-E310377 [cTOA-10-A24]">
      <seq>ttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccacttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgccgatgatgatgatgtaaaagaatcttgggaagatgaaaaggagcctgctccggcacctaaaccataacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtggaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctacaaaattttatcccacaaagtgagagtgacttcttggaatatgctgagctgatatctcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49095" stop="55453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49395" g_stop="49498" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="165" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="284" r_length="119" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="418" r_length="134" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55153" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="551" r_length="133" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E310377" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E310377" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49395" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55153"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCAT</genome_strand>
        <mrna_strand>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCACTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCCGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAAAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCATAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTGGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTACAAAATTTTATCCCACAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E334178" ref_strand="+" ref_description="SGN-E334178 [cTOD-21-B17]">
      <seq>ttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattggggtgtcaagaagatgcaaaaggtacaaaagagagatgcatccaaagaaactatattagatttagggagctaaagtccaaaacagaccagtgcaatttgaggtgctccaactaattaaccaggcatctagcttttgaagagtggacggatttgagattccatcaaaacatatacggttctaactgtgtaagtacaccaaaagatattcacagggatcataatccggatctcctctgactttaaaacttcatcaactccaagattcatagacttctgtgactctctgtggtatgaccctattgacttcaaaatagagtagaacgattcctcaagtcagcaacaattttgttttagccttatatatgctttgtcatcactcacaccacaacagggttttgtgtgtggcagaaatgaaacggaataaacaataatctaagaattcatctcactaatcaatggtaagctgcttatgctgtctctattgtggtaagcgtttaataatacttgcttctggattgtctaagtgctcagcctattcacttggactcactggttcattttttagcatagcatttacaagaagcaactaccattgtaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49095" stop="52392"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49395" g_stop="49498" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="165" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="51493" i_length="729">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.821" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51494" g_stop="52092" g_length="599"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="764" r_length="599" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E334178" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>764</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E334178" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49395" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="51494" e_stop="52092"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTG</genome_strand>
        <mrna_strand>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGGACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E729548" ref_strand="+" ref_description="SGN-E729548 [LA21BF02]">
      <seq>gagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49097" stop="55892"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49397" g_stop="49498" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="163" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="282" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="416" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="567" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="727" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="55501" g_stop="55592" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="728" r_stop="819" r_length="92" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E729548" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>819</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E729548" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49397" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55592"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGA</genome_strand>
        <mrna_strand>GAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E245532" ref_strand="+" ref_description="SGN-E245532 [cLEF-43-H2]">
      <seq>gccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49099" stop="55459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49399" g_stop="49498" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="161" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="280" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="414" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55159" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="553" r_length="139" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E245532" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245532" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49399" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55159"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTG</genome_strand>
        <mrna_strand>GCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E260922" ref_strand="+" ref_description="SGN-E260922 [cLEG-55-F5]">
      <seq>ccaagggcattttggtcatcataaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactctaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaatatgcagatgatgatgatgtaaaataatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49100" stop="55680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49400" g_stop="49498" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="160" r_length="61" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="279" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="413" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="564" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55266" g_stop="55380" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="679" r_length="115" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E260922" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E260922" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49400" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55380"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGA</genome_strand>
        <mrna_strand>CCAAGGGCATTTTGGTCATCATAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCTAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAATATGCAGATGATGATGATGTAAAATAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E261316" ref_strand="+" ref_description="SGN-E261316 [cLEG-68-L10]">
      <seq>agggcattttggtcatcagaaacgctgcttcagcattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49103" stop="51064"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49403" g_stop="49498" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="158" r_length="61" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E261316" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>157</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261316" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49403" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGCATTTTGGTCATCAGAAACGCTGCTTCA-CATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG</genome_strand>
        <mrna_strand>AGGGCATTTTGGTCATCAGAAACGCTGCTTCAGCATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E271454" ref_strand="+" ref_description="SGN-E271454 [cLEM-5-P17]">
      <seq>cattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctanaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgaactgatatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49107" stop="55449"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49407" g_stop="49498" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="153" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="272" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="406" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55149" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="535" r_length="129" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E271454" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E271454" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49407" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55149"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATC</genome_strand>
        <mrna_strand>CATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTANAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAACTGATATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E228171" ref_strand="+" ref_description="SGN-E228171 [cLED-2-E19]">
      <seq>cattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49107" stop="55363"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49407" g_stop="49498" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="153" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="272" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="406" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55063" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="449" r_length="43" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E228171" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>449</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228171" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49407" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55063"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTT</genome_strand>
        <mrna_strand>CATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E201767" ref_strand="+" ref_description="SGN-E201767 [cLEC-11-O4]">
      <seq>cattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgattatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49107" stop="55143"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49407" g_stop="49498" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="153" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="272" r_length="119" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54843" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="368" r_length="96" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E201767" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>368</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E201767" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49407" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54843"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAG</genome_strand>
        <mrna_strand>CATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATTATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E244849" ref_strand="+" ref_description="SGN-E244849 [cLEF-2-K6]">
      <seq>ttttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaagcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49109" stop="55139"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49409" g_stop="49498" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="151" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="270" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54839" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="362" r_length="92" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E244849" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>362</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244849" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49409" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54839"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGA</genome_strand>
        <mrna_strand>TTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAAGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E354699" ref_strand="+" ref_description="SGN-E354699 [cLHT-5-B19]">
      <seq>tcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaatcaactagagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgacgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggtccccaagaagtctgctgcaaaggctgatgaaaagaaaggcaaggaagttcatactaatgaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49115" stop="55141"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49415" g_stop="49498" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="145" r_length="61" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="0.96"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="264" r_length="119" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54841" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="358" r_length="94" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E354699" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>358</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E354699" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49415" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54841"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAG</genome_strand>
        <mrna_strand>TCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATCAACTAGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGACGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGTCCCCAAGAAGTCTGCTGCAAAGGCTGATGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E263068" ref_strand="+" ref_description="SGN-E263068 [cLEG-59-L7]">
      <seq>agaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49120" stop="55882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49420" g_stop="49498" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="140" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="259" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="393" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="544" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="704" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="55501" g_stop="55582" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="705" r_stop="786" r_length="82" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E263068" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>786</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E263068" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49420" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55582"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGA</genome_strand>
        <mrna_strand>AGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E275174" ref_strand="+" ref_description="SGN-E275174 [cLEN-9-H8]">
      <seq>agaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49120" stop="55586"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49420" g_stop="49498" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="140" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="259" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="393" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="544" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55266" g_stop="55286" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="565" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E275174" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E275174" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49420" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55286"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGG</genome_strand>
        <mrna_strand>AGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E308097" ref_strand="+" ref_description="SGN-E308097 [cLEY-14-A23]">
      <seq>gaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaaaaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctttagatccaattacagaaaaacttcgccagcaaaggcttgttgaagaagctgattataag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49121" stop="55345"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49421" g_stop="49498" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="139" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="258" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="392" r_length="134" r_score="0.963"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="0.92"/>
            <acceptor a_prob="0.949" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55045" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="417" r_length="25" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E308097" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E308097" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49421" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55045"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAG</genome_strand>
        <mrna_strand>GAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAAAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTTTAGATCCAATTACAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTTGAAGAAGCTGATTATAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E331139" ref_strand="+" ref_description="SGN-E331139 [cTOD-6-P5]">
      <seq>aaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcgaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgcctagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49122" stop="55448"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49422" g_stop="49498" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="138" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="257" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="391" r_length="134" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55148" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="519" r_length="128" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E331139" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331139" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49422" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55148"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATAT</genome_strand>
        <mrna_strand>AAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCGAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCTAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E213049" ref_strand="+" ref_description="SGN-E213049 [cLEC-72-J7]">
      <seq>aacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49123" stop="55585"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49423" g_stop="49498" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="137" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="256" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="390" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="541" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55266" g_stop="55285" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="561" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E213049" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E213049" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49423" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55285"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGG</genome_strand>
        <mrna_strand>AACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E214856" ref_strand="+" ref_description="SGN-E214856 [cLEC-78-O11]">
      <seq>ttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49149" stop="55670"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49449" g_stop="49498" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="111" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="230" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="364" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="515" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55266" g_stop="55370" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="620" r_length="105" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E214856" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E214856" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49449" e_stop="49498"/>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTT</genome_strand>
        <mrna_strand>TTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E297013" ref_strand="+" ref_description="SGN-E297013 [cLEW-6-H1]">
      <seq>ttcttcatctattgggttattgctctgtttttggtttattcgttcaatcttgtttcttggttcaatttattgtttttctctgcgattggcgtcttcggaggtatatatatgcgtcagtatttgagtcgcacgcatcatatcatatattcttgtgtctatgaacggaaattagggctttcggatttgtaacttttgagaactgatttagtggcggttttagggttcagccgcctttgccgaccttttatacaatgtccgaccgactcgaacactgatgttaattgacacttttttcttccactgttttatggtttttgacaagtctctgtgtgtgtaggtattgatataatttgggcagcgaggtgatgttcttgattaatattggcgttttattgacactgtgttatggtttttgacaattttgtatgtgtgggtattgatagaatcttgggagtgaggtgaatttcttgattaatattggagttccattgacattgtgttatggtttttgacaagtttgtatgtgtgggtattaatagaatcttgggagcgaggtgattttcttgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49211" stop="50379"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49511" g_stop="50079" g_length="569"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="569" r_length="569" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E297013" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E297013" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49511" e_stop="50079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATT</genome_strand>
        <mrna_strand>TTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E297011" ref_strand="+" ref_description="SGN-E297011 [cLEW-6-F1]">
      <seq>ttcttcatctattgggttattgctctgtttttggtttattcgttcaatcttgtttcttggttcaatttattgtttttctctgcgattggcgtcttcggaggtatatatatgcgtcagtatttgagtcgcacgcatcatatcatatattcttgtgtctatgaacggaaattagggctttcggatttgtaacttttgagaactgatttagtggcggttttagggttcagccgcctttgccgaccttttatacaatgtccgaccgactcgaacactgatgttaattgacacttttttcttccactgttttatggtttttgacaagtctctgtgtgtgtaggtattgatataatttgggcagcgaggtgatgttcttgattaatattggcgttttattgacactgtgttatggtttttgacaattttgtatgtgtgggtattgatagaatcttgggagtgaggtgaatttcttgattaatattggagttccattgacattgtgttatggtttttgacaagtttgtatgtgtgggtattaatagaatcttggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49211" stop="50359"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49511" g_stop="50059" g_length="549"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="549" r_length="549" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E297011" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E297011" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49511" e_stop="50059"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGA</genome_strand>
        <mrna_strand>TTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E297009" ref_strand="+" ref_description="SGN-E297009 [cLEW-6-D1]">
      <seq>ttcttcatctattgggttattgctctgtttttggtttattcgttcaatcttgtttcttggttcaatttattgtttttctctgcgattggcgtcttcggaggtatatatatgcgtcagtatttgagtcgcacgcatcatatcatatattcttgtgtctatgaacggaaattagggctttcggatttgtaacttttgagaactgatttaatggcggttttagggttcaaccgcctttgccgaccttttatacaatgtccgaccgactcgaacactgatgttaattgacacttttttcttccactgttttatggtttttgacaagtctctgtgtgtgtaggtattgatataatttgggcagctgaggtgatgttcttgattaatattggcgttttattgacactgtgttatggatgttgacaatcttgtatgtgtgggtatcgatagaatcttgggagtgaggtgaattacttgattaatattggagttccattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="49211" stop="50302"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49511" g_stop="50002" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="493" r_length="493" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E297009" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E297009" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49511" e_stop="50002"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGC-GAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGA</genome_strand>
        <mrna_strand>TTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAATGGCGGTTTTAGGGTTCAACCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCTGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGATGTTGACAATCTTGTATGTGTGGGTATCGATAGAATCTTGGGAGTGAGGTGAATTACTTGATTAATATTGGAGTTCCATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E710667" ref_strand="+" ref_description="SGN-E710667 [FA56AF12]">
      <seq>tctcttcccatatactcgaacttaacaagtctttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="50401" stop="55883"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="72" r_length="61" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="0.98"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="73" r_stop="191" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="325" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="476" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="636" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55501" g_stop="55583" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="637" r_stop="719" r_length="83" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E710667" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E710667" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55583"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGAT</genome_strand>
        <mrna_strand>ATACTCGAACTTAACAAGTCTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E247841" ref_strand="+" ref_description="SGN-E247841 [cLEF-47-K3]">
      <seq>tatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="50401" stop="52811"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50704" g_stop="50764" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="76" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52409" g_stop="52511" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="179" r_length="103" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E247841" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>164</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E247841" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50704" e_stop="50764"/>
          <exon e_start="52409" e_stop="52511"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGA</genome_strand>
        <mrna_strand>ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E698650" ref_strand="+" ref_description="SGN-E698650 [FA07AF09]">
      <seq>ctcgaacttaaccgttttttgtggacggaagagaattaactggagatggaggactgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggctcttctattactgcatttgcaaatgagaagattacagcacaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaaccagctacatgttgataacgcagatgatgatgcagtactaaatgcatatgatggttatgatgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="50422" stop="55878"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50707" g_stop="50764" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="0.92"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="177" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="311" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="462" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="622" r_length="160" r_score="0.981"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55501" g_stop="55578" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="623" r_stop="700" r_length="78" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E698650" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E698650" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50707" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55578"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATT</genome_strand>
        <mrna_strand>CTCGAACTTAACCGTTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGCTCTTCTATTACTGCATTTGCAAATGAGAAGATTACAGCACAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAACCAGCTACATGTTGATAACGCAGATGATGATGCAGTACTAAATGCATATGATGGTTATGATGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E211081" ref_strand="+" ref_description="SGN-E211081 [cLEC-69-D17]">
      <seq>tcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="50408" stop="55885"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50708" g_stop="50764" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="176" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="310" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="461" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="621" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55501" g_stop="55585" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="622" r_stop="706" r_length="85" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E211081" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E211081" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50708" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55585"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTT</genome_strand>
        <mrna_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E237885" ref_strand="+" ref_description="SGN-E237885 [cLED-18-J24]">
      <seq>tcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattgggtcttctattactgcatttgcaaatgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="50408" stop="55679"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50708" g_stop="50764" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="176" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="310" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="461" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55266" g_stop="55379" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="575" r_length="114" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E237885" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E237885" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50708" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55379"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAG</genome_strand>
        <mrna_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGGTCTTCTATTACTGCATTTGCAAATGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E235548" ref_strand="+" ref_description="SGN-E235548 [cLED-11-B6]">
      <seq>tcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggatcttctattactgcattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="50408" stop="55670"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50708" g_stop="50764" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="176" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="310" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="461" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55266" g_stop="55370" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="566" r_length="105" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E235548" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E235548" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50708" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTT</genome_strand>
        <mrna_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGATCTTCTATTACTGCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E266378" ref_strand="+" ref_description="SGN-E266378 [cLEI-3-C16]">
      <seq>tcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="50408" stop="55593"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50708" g_stop="50764" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="176" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="310" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="461" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55266" g_stop="55293" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="489" r_length="28" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E266378" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266378" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50708" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55293"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCA</genome_strand>
        <mrna_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E267588" ref_strand="+" ref_description="SGN-E267588 [cLEI-8-D5]">
      <seq>tcgaacttaacaagtttttgtggacggcatataattaactggatatggaggagggggaggatataccatttccagatctacttaagaaggatcagccaacacgtaaatgggatgatgaagatgcatatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgcttctgcacctaaaccagaacctactgctgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="50408" stop="55075"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50708" g_stop="50764" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="0.895"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="0.88"/>
            <acceptor a_prob="0.953" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="176" r_length="119" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54748" g_stop="54775" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="204" r_length="28" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E267588" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>204</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267588" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50708" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54775"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGA</genome_strand>
        <mrna_strand>TCGAACTTAACAAGTTTTTGTGGACGGCATATAATTAACTGGATATGGAGGAGGGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCATTTCCAGATCTACTTAAGAAGGATCAGCCAACACGTAAATGGGATGATGAAGATGCATATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTTCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTACTGCTGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E706795" ref_strand="+" ref_description="SGN-E706795 [FA30DG12]">
      <seq>cgatttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="50409" stop="55990"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50709" g_stop="50764" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="174" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="308" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="459" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="619" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="55501" g_stop="55690" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="620" r_stop="809" r_length="190" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E706795" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>810</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E706795" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50709" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55690"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACT</genome_strand>
        <mrna_strand>CG-ATTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E252481" ref_strand="+" ref_description="SGN-E252481 [cLEG-20-K7]">
      <seq>aacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgctaaggctggtgaaaagaaaggcaaggaagttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="50411" stop="55130"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50711" g_stop="50764" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="173" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54748" g_stop="54830" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="256" r_length="83" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E252481" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>256</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E252481" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50711" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54830"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCA</genome_strand>
        <mrna_strand>AACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCTAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E264948" ref_strand="+" ref_description="SGN-E264948 [cLEI-10-H9]">
      <seq>ttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaagaagccactgcgagtaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="50414" stop="55716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50714" g_stop="50764" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="170" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="304" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="455" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55266" g_stop="55416" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="606" r_length="151" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E264948" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>606</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264948" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50714" e_stop="50764"/>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55416"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAA</genome_strand>
        <mrna_strand>TTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAAGAAGCCACTGCGAGTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E317424" ref_strand="+" ref_description="SGN-E317424 [cTOA-28-H21]">
      <seq>aaaagagagatgcatccaaagaaactatattagatttagggagctaaagtccaaaacagaccagtgcaatttgaggtgctccaactaattaaccaggcatctagcttttgaagagtggacggatttgagattccatcaaaacatatacggttctaactgtgtaagtacaccaaaagatattcacagggatcataatccggatctcctctgactttaaaacttcatcaactccaagattcatagacttctgtgactctctgtggtatgaccctattgacttcaaaatagagtagaacgattcctcaagtcagcaacaattttgttttagccttatatatgctttgtcatcactcacaccacaacagggttttgtgtgtggcagaaatgaaacggaataaacaataatctaagaattcatctcactaatcaatggtaagctgcttatgctgtctctattgtggtaagcgtttaataatacttgcttctggattgtctaagtgctcagcctattcacttgaactcactggttcattttttagcatagcatttacaagaagcaactaccattgtaactggttgactgttcacagtaattggaataaaaccatagatgttggttccctatttctggagattttgcttgttcaaaccagtttatttttgggtttgattcatttgtctttctgagaagacttggattcccctctcatgggacattgacatggnttattgtgcatgcagaaaaagggatgtaccataatcttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="51218" stop="52583"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51518" g_stop="52283" g_length="766"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="766" r_length="766" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E317424" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>766</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E317424" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51518" e_stop="52283"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTAT</genome_strand>
        <mrna_strand>AAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCCTCTCATGGGACATTGACATGGNTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E377234" ref_strand="+" ref_description="SGN-E377234 [TUS-19-N6]">
      <seq>aggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaactaacaaagacaggcatgttaggccgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="52109" stop="55933"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="253" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="404" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="564" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55501" g_stop="55633" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="696" r_length="132" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E377234" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E377234" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55633"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTT</genome_strand>
        <mrna_strand>AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAAC-TAACAAAGACAGGCATGTTAGGCCGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E233029" ref_strand="+" ref_description="SGN-E233029 [cLED-6-A7]">
      <seq>aggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="52109" stop="55684"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="253" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="404" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55266" g_stop="55384" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="523" r_length="119" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E233029" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>523</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E233029" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55384"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGAT</genome_strand>
        <mrna_strand>AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E698728" ref_strand="+" ref_description="SGN-E698728 [FA07BF09]">
      <seq>gggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcacatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggctcttctattactgcatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="52108" stop="55671"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52409" g_stop="52527" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="4" r_stop="122" r_length="119" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="256" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="407" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55266" g_stop="55371" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="513" r_length="106" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E698728" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>510</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E698728" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52409" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55371"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTG</genome_strand>
        <mrna_strand>AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCACATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGCTCTTCTATTACTGCATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E267815" ref_strand="+" ref_description="SGN-E267815 [cLEI-12-E3]">
      <seq>aaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="52138" stop="55173"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52438" g_stop="52527" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54748" g_stop="54873" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="216" r_length="126" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E267815" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>216</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267815" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52438" e_stop="52527"/>
          <exon e_start="54748" e_stop="54873"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGC</genome_strand>
        <mrna_strand>AAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E235625" ref_strand="+" ref_description="SGN-E235625 [cLED-15-I9]">
      <seq>gaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="52168" stop="55871"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52468" g_stop="52527" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="194" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="345" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="505" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55501" g_stop="55571" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="576" r_length="71" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E235625" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E235625" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52468" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55571"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTAT</genome_strand>
        <mrna_strand>GAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E233696" ref_strand="+" ref_description="SGN-E233696 [cLED-14-J1]">
      <seq>gaagatgcagatgatgatgatgcaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggcggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgactgcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagatgacaggtgcaaagaagaagcagctacatgttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="52168" stop="55828"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52468" g_stop="52527" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="194" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="345" r_length="151" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="505" r_length="160" r_score="0.994"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55501" g_stop="55528" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="533" r_length="28" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E233696" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>533</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E233696" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52468" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55528"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGA</genome_strand>
        <mrna_strand>GAAGATGCAGATGATGATGATGCAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGCGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTGCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGATGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E242823" ref_strand="+" ref_description="SGN-E242823 [cLED-31-B14]">
      <seq>gaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="52168" stop="55581"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52468" g_stop="52527" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="194" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="345" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55266" g_stop="55281" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="361" r_length="16" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E242823" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>361</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E242823" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52468" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55281"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACA</genome_strand>
        <mrna_strand>GAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E244451" ref_strand="+" ref_description="SGN-E244451 [cLEF-3-K22]">
      <seq>aagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="52205" stop="55888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52505" g_stop="52527" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220">
            <donor d_prob="0.992" d_score="0.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="157" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="308" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="468" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="55501" g_stop="55588" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="556" r_length="88" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E244451" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E244451" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52505" e_stop="52527"/>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55588"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTACGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCAT</genome_strand>
        <mrna_strand>AAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E202081" ref_strand="+" ref_description="SGN-E202081 [cLEC-7-A9]">
      <seq>aaaagaaaaggagcctgctccggcacctaaaccagaaccttctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatacactagcagaacaacttcgccagcaaaggcttgtagaagaagctaattataagtgcacggctgaattgtttgccaagaaaggtggtgatgacaagacccttgaaaattttataccaaaaagtgagagtgactcctaggaatatgctgagctgatatctcataacctgccaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgctgaaagggcatgacgctaaagacattggatcttctattact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="54444" stop="55664"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54748" g_stop="54881" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="156" r_length="134" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="0.94"/>
            <acceptor a_prob="0.949" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="307" r_length="151" r_score="0.947"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="0.92"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55266" g_stop="55364" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="406" r_length="99" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E202081" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E202081" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54748" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55364"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACT</genome_strand>
        <mrna_strand>GCACCTAAACCAGAACCTTCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATACACTAGCAGAACAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTAATTATAAGTGCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTTGAAAATTTTATACCAAAAAGTGAGAGTGACTCCTAGGAATATGCTGAGCTGATATCTCATAACCTGCCACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGCTGAAAGGGCATGACGCTAAAGACATTGGATCTTCTATTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E348279" ref_strand="+" ref_description="SGN-E348279 [cTOF-27-B9]">
      <seq>gaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgagggaagatcttggggccatgttacctccctattctggagtcttattgagtgtgtcatatctttttctttctgttccgtcgggtcaaataagaaagtatcctttgttttgttacattttgtggtcagttactggttggagatccgttggtaaatgatttgtcggttgatctgcattctctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="54538" stop="56174"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54838" g_stop="54881" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55021" g_stop="55171" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="195" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="355" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="55501" g_stop="55874" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="729" r_length="374" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E348279" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>729</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E348279" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54838" e_stop="54881"/>
          <exon e_start="55021" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55874"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGA-GGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTT</genome_strand>
        <mrna_strand>GAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTG-TTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E243540" ref_strand="+" ref_description="SGN-E243540 [cLED-34-A17]">
      <seq>tgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgaggaagatcttggggccatgttacctccctattctggagtcttattgagtgtgtcatatctttttctttctgttccgtcgggtcaaataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="54736" stop="56083"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55036" g_stop="55171" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="136" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="296" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55501" g_stop="55783" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="579" r_length="283" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E243540" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243540" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55036" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55783"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAA</genome_strand>
        <mrna_strand>TGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E241667" ref_strand="+" ref_description="SGN-E241667 [cLED-36-G17]">
      <seq>tgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgaggaagatcttggggccatgttacctccctattctggagtcttattgagtgtgtcatatctttttctttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="54736" stop="56064"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55036" g_stop="55171" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="136" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="296" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55501" g_stop="55764" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="560" r_length="264" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E241667" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E241667" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55036" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55764"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCT</genome_strand>
        <mrna_strand>TGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E227046" ref_strand="+" ref_description="SGN-E227046 [cLED-1-N2]">
      <seq>agtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagcagatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgaggaagatcttggggccatgttacctccctattctggagtcttattgagtgtgtcatatcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="54744" stop="56056"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55044" g_stop="55171" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="288" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55501" g_stop="55756" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="544" r_length="256" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E227046" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E227046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55044" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55756"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTT</genome_strand>
        <mrna_strand>AGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCAGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E236250" ref_strand="+" ref_description="SGN-E236250 [cLED-20-A5]">
      <seq>agtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgaggaagatcttggggccatgttaccttccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="54744" stop="56022"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55044" g_stop="55171" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="288" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55501" g_stop="55723" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="511" r_length="223" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E236250" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E236250" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55044" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55723"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCT</genome_strand>
        <mrna_strand>AGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E377233" ref_strand="+" ref_description="SGN-E377233 [TUS-19-N6](-)">
      <seq>tggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgaggaagatcttggggccatgttacctccctattctggagtcttattgagtgtgtcatatctttttctttctgttccgtcgggtcaaataagaaagtatcctttgttttgtttacattttgtggtcagttactggttggagatccgttggtaaatgatttgtcggttgatctgcattctcttgtatgattcagatctcagattttggacctatagatttcatgtaactgtcttattcaaaactatttgatcctttctttaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="54828" stop="56256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55128" g_stop="55171" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="204" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55501" g_stop="55951" g_length="451"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="655" r_length="451" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="656" polyA_stop="671"/>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E377233" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>655</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E377233" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55128" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55951"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTT</genome_strand>
        <mrna_strand>TGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E397973" ref_strand="+" ref_description="SGN-E397973 [TUS-37-E11](-)">
      <seq>cataagttgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgaggaagatcttggggccatgttacctccctattctggagtcttattgagtgtgtcatatctttttctttctgttccgtcgggtcaaataagaaagtatcctttgttttgtttacattttgtggtcagttactggttggagatccgttggtaaatgatttgtcggttgatctgcattctcttgtatgattcagatctcagattttggacctatagatttcatgtaactgtcttattcaaaactatttgatcctttcttttcataaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="54960" stop="56256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55151" g_stop="55171" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55266" g_stop="55425" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="181" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55501" g_stop="55955" g_length="455"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="636" r_length="455" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="637" polyA_stop="647"/>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E397973" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E397973" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55151" e_stop="55171"/>
          <exon e_start="55266" e_stop="55425"/>
          <exon e_start="55501" e_stop="55955"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCAT</genome_strand>
        <mrna_strand>CATAAGTTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E227047" ref_strand="+" ref_description="SGN-E227047 [cLED-1-N2](-)">
      <seq>agaagattaaagcagaaaagaaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgaggaagatcttggggccatgttacctccctattctggagtcttattgagtgtgtcatatctttttctttctgttccgtcgggtcaaataagaaagtatcctttgttttgtttacattttgtggtcagttactggttggagatccgttggtaaatgatttgtcggttgatctgcattctcttgtatgattcagatctcagattttggacctatagatttcatgtaactgtcttattcaaaactatttgatcctttcttttcataaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="55078" stop="56256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55378" g_stop="55425" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55501" g_stop="55955" g_length="455"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="503" r_length="455" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E227047" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E227047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55378" e_stop="55425"/>
          <exon e_start="55501" e_stop="55955"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCAT</genome_strand>
        <mrna_strand>AGAAGATTAAAGCAGAAAAGAAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E229994" ref_strand="+" ref_description="SGN-E229994 [cLEL-33-P20](-)">
      <seq>gaagacaggtgcaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactnacgagaagatcttggggccatgttacctccctattctggagtcttattgagtgtgtcatatctttttctttctgttccgtcgggtcaaataagaaagtatcctttgttttgtttacattttgtggtcagttactggttggagatccgttggtaaatgatttgtcggttgatctgcattctcttgtatgattcagatctcagattttggacctatagatttcatgtaactgtcttattcaaaactatttgatcctttcttttcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="55197" stop="56256"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55418" g_stop="55425" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="8" r_length="8" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75">
            <donor d_prob="0.802" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="55501" g_stop="55953" g_length="453"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="460" r_length="452" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="461" polyA_stop="477"/>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E229994" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E229994" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55418" e_stop="55425"/>
          <exon e_start="55501" e_stop="55953"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACT-ACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTC</genome_strand>
        <mrna_strand>GAAGACAG...........................................................................GTGC-AAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTNACGA-GAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E315645" ref_strand="+" ref_description="SGN-E315645 [cTOA-22-P3]">
      <seq>ggaaagaacataacttccatatgttggcgtcctgatgggaaagcaattgcagttgggcttgaagatgggaccatctccttgcatgatgtagaaaatggaaagctgctgcgaaacataaaatcccactcggctgatgtcgtgtgtctccattgggaggaggatgggaagaaggacatgaacagtaatacctccagttatgaagatcgaacttcacggttctttcctcctccccctagagttcctaagatgcctggacttgtacctggggatagtggcttcatggatgatggagaggattctttccaggagctatcaaattcttcacatcaaagatataacattttatgtagcggggacaaggatggaagtatctgcttcaatatctttggcatatttccaatagggacagttaatatacacaaccttgttgtctccagttcactctcaagcagcaatgttgctagccgacttctgaatgcttccatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="57480" stop="60332"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57780" g_stop="57872" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57873" i_stop="58764" i_length="892">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58765" g_stop="58842" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="171" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58843" i_stop="59586" i_length="744">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="59587" g_stop="59826" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="411" r_length="240" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="59827" i_stop="59955" i_length="129">
            <donor d_prob="0.838" d_score="1.00"/>
            <acceptor a_prob="0.144" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="59956" g_stop="60031" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="487" r_length="76" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E315645" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E315645" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57780" e_stop="57872"/>
          <exon e_start="58765" e_stop="58842"/>
          <exon e_start="59587" e_stop="59826"/>
          <exon e_start="59956" e_stop="60031"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAGAACATAACTTCCATATGTTGGCGTCCTGATGGGAAAGCAATTGCAGTTGGGCTTGAAGATGGGACCATCTCCTTGCATGATGTAGAAGTGAGTTTGATCATATAAACGATGCTTTTCTTAGTGCATGTAGCTGTTGGTTTAAGTATGTCATGAATCTGTTTAAGCAAAATATGATAGTTGCAGGATCAAAGATATTTACCGTTCGATGATCTTATAAATTCCTTGGATTATTTCATTTCTTACTCATAAAAACAAAGAAGTAAGTTATGCCATGAGGTAGCAAATAATTATTTGAAAATAAATCACTTGATAAGATAAATTTATCCAATGGTTTTCAAACTTCTCTTGCTCGGTCTAAGTTGTTGCCATTTTCCATCTGCAATATTTGCATCCTTGTCACTATTTGCTAGATACCTACACCTGCTGTCTTCCCTGAAAGAAGTTGTACTACCCTACTTTGGAATTTGTAATGCAGAAGATATTTCTTCTCCTTTTAGAAAACTTATAGATTGTTCTTTCCCTGTAAACCTTTTAAAAGCTTTTAGTGAAGGTACACCACTATAAGTGTTCATTAAACATATCTTATAAGATATTGCATCTTGCAATGATGTGATAAAAACTTATTTGAGGATCTTATATATGTAACTTCAATGTGCATTACTTGTTTTGTATTCTACAGAAGAATACAGCACTAGTTATCTCTTGAGCATTATATTTGATGAAGAGCCTAAAACTACTTTGTTTATTTAGCTGCAAATTAGAAAAAATCCACTATGGTGACACTGAGTAATTTGCTAAAAAATATTTTTTTTCAAGAGCTTGGTGGATTTCATTAGGATTAGGTTGAGTGAGAAGAATTCCATTTTGTTGGCTTGAGCCTTTAAGTTAAGATTTGTCCCTGTCAATTAGAACATTATTGGTTCATTCTCCTGTATGTTTTCTGTACATACTGTTTTCTCATTAGTCTGTTCCCTTGCAGAATGGAAAGCTGCTGCGAAACATAAAATCCCACTCGGCTGATGTCGTGTGTCTCCATTGGGAGGAGGATGGGAAGAAGGTTTTACTTTTTGTTCAAACTTCTGACAGACTACTTTTCCATGGTTAATAGTAGTGCAAGTTTATTCAAGTTTAATGCAAGTTATTTATCATGCAAGGATTAAACGTCAGCCAGTTGAGGTCTGACTTGTTCATTTGTGAACTAAACTGCACTATTTCAATTACATTGAGTAAAGGAAAATAGTTCCTTATGTGAAAATATATTGAAAATTAAAGCCAAACTGCCCTCTCTTTCTCGTATTGAGAAAATCCATTTCTACCACAGCAGCCAGTTAACATCCATTTTTTAAATCTGAAAGTGAAAAGTCATTTAGCGTCCACCTGCAGATTCAGTTTATGCTCCATGATGAAGCCATTCTTGATTTGTTTTAATCTCTAATTAACTCAAAGAAGCTTAAAGAGTTGTTTAGCCTTCTTGCTGGATTGAACTTCCGCTAGTTGTATCTCTAGTTCCAAGATCAAACGAATTGTCTCAGACTGTTAGTGTGCAGTATAATTCTGTTGGGGAACTGCATGTTTTGATCTTTGTTATCTCTGTTAAGGTGTCGTAGCAAATTTTACGGTGGAACAGATGACTTGCAGGGAGTTGCTGCCTTATGTAGAGCCTGAAACTTTATGCTATGATACTTATTAGTTCGGAGGGTTCTGGATATGTTTTGGGTGCTTTGCTTTCTGTGCCTTCTTAAATCTTGATACTTTTGTTTCACCTTTCCTGACCTTGTAACTCTTATCTCCTGGAATTTAGGACATGAACAGTAATACCTCCAGTTATGAAGATCGAACTTCACGGTTCTTTCCTCCTCCCCCTAGAGTTCCTAAGATGCCTGGACTTGTACCTGGGGATAGTGGCTTCATGGATGATGGAGAGGATTCTTTCCAGGAGCTATCAAATTCTTCACATCAAAGATATAACATTTTATGTAGCGGGGACAAGGATGGAAGTATCTGCTTCAATATCTTTGGCATATTTCCAATAGGGACAGTTGTAAGTTGTTTGTCTTCATTAAAGATGTTTTGGTTTTTTAAAAAAAATATATTTTCATTTCACCTGTCTCTTTGACTAATTGTCTGATATTTATTTCTATTATGTGGATTACTTGGACTTACTCGCTAGAATATACACAACCTTGTTGTCTCCAGTTCACTCTCAAGCAGCAATGTTGCTAGCCGACTTCTGAATGCTTCCATTT</genome_strand>
        <mrna_strand>GGAAAGAACATAACTTCCATATGTTGGCGTCCTGATGGGAAAGCAATTGCAGTTGGGCTTGAAGATGGGACCATCTCCTTGCATGATGTAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAAAGCTGCTGCGAAACATAAAATCCCACTCGGCTGATGTCGTGTGTCTCCATTGGGAGGAGGATGGGAAGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATGAACAGTAATACCTCCAGTTATGAAGATCGAACTTCACGGTTCTTTCCTCCTCCCCCTAGAGTTCCTAAGATGCCTGGACTTGTACCTGGGGATAGTGGCTTCATGGATGATGGAGAGGATTCTTTCCAGGAGCTATCAAATTCTTCACATCAAAGATATAACATTTTATGTAGCGGGGACAAGGATGGAAGTATCTGCTTCAATATCTTTGGCATATTTCCAATAGGGACAGTT.................................................................................................................................AATATACACAACCTTGTTGTCTCCAGTTCACTCTCAAGCAGCAATGTTGCTAGCCGACTTCTGAATGCTTCCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E212514" ref_strand="+" ref_description="SGN-E212514 [cLEC-74-C10]">
      <seq>atagtggcttcatggatgatggagaggattctttccaggagctatcaaattcttcacatcaaagatataacattttatgtagcggggacaaggatggaagtatctgcttcaatatctttggcatatttccaatagggacagttaatatacacaaccttgttgtctccagttcactctcaagcagcaatgttgctagccgacttctgaatgcttccatttgtaaggtggccttgtccaaagatctttgccatttagtagttttgtgcaatggggagctgatcacagatgaggttgatcaaggtgaaggacatcatgggttacttggctttcactgcttagtcctcaatacttcaatattttccaaaaggaaaactgaacttcaccaggttgcccaacaggcttccaacattgaagatctgagtgaagtcatccggacatcactatcagtcatgtctaaaatatggtccgatgctatgcatacatttcacgagaagttcaatgctgtatccacattgatcgctgatcatggacttgactctactcctcaggatgagtttcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="59384" stop="63382"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59684" g_stop="59826" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="143" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59827" i_stop="59955" i_length="129">
            <donor d_prob="0.838" d_score="1.00"/>
            <acceptor a_prob="0.144" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59956" g_stop="60036" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="224" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60037" i_stop="60488" i_length="452">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.859" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="60489" g_stop="60631" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="367" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="60632" i_stop="62802" i_length="2171">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.859" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62803" g_stop="62963" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="528" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="62964" i_stop="63050" i_length="87">
            <donor d_prob="0.743" d_score="1.00"/>
            <acceptor a_prob="0.904" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="63051" g_stop="63082" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="560" r_length="32" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E212514" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E212514" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59684" e_stop="59826"/>
          <exon e_start="59956" e_stop="60036"/>
          <exon e_start="60489" e_stop="60631"/>
          <exon e_start="62803" e_stop="62963"/>
          <exon e_start="63051" e_stop="63082"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGTGGCTTCATGGATGATGGAGAGGATTCTTTCCAGGAGCTATCAAATTCTTCACATCAAAGATATAACATTTTATGTAGCGGGGACAAGGATGGAAGTATCTGCTTCAATATCTTTGGCATATTTCCAATAGGGACAGTTGTAAGTTGTTTGTCTTCATTAAAGATGTTTTGGTTTTTTAAAAAAAATATATTTTCATTTCACCTGTCTCTTTGACTAATTGTCTGATATTTATTTCTATTATGTGGATTACTTGGACTTACTCGCTAGAATATACACAACCTTGTTGTCTCCAGTTCACTCTCAAGCAGCAATGTTGCTAGCCGACTTCTGAATGCTTCCATTTGTAAGGTATGTTTACTTTGTTGTCAACGGTCTTATGATATCTTAGTAGTCCAAAGGTTGAAGTATTGATGTCTTGTTCAACGATGCATTTTGCTATATCCTGCTTATTCACATCAATATTTTCTTTTAGTTTCCATTTCAAATAATTTCGTTGGAATTGATACCTGGAAGGTCACAGAACAGTCTCAAACATCACAAAACAATAGTGATAAAAGTAGTAATAGTAATTTAAAAAGAAAAATAGCGATAAAGATAAAAGATGCTTATGCAGAATCAGCTTTTGTTGCTCAAAAGATTTAGTGTAAGTGTGTAACACATTCCAAAAAATGATGACACCTTTAGGAATCAGGTATTGGCACTTTTCATGTGACTTGTCAGGAGAATTTTTTTGCATAGATTGTGCCAAATTCATGCCTTATTCCTATTCATTGTTCTCACTATGTATGATGTCATTGAAGGTGGCCTTGTCCAAAGATCTTTGCCATTTAGTAGTTTTGTGCAATGGGGAGCTGATCACAGATGAGGTTGATCAAGGTGAAGGACATCATGGGTTACTTGGCTTTCACTGCTTAGTCCTCAATACTTCAATATTTTCCAAAAGGTAATTGTAAAGCGAAACTTTATGAATTTTCATCTCCTGTTTTAAGATGTGAATATTCTCTATTTTGCAGCAACCAGCAATTGTTGTTTCTGAGACAATCGTCATAGATGATGATTATAGAGATGATTTGAATTTTACTTGGATCGACTTTATGGGAAATTAAAAATGAAGGACTTGAATATTGGAGATAGAAGTGCTGGAAAATATTGTTTCAAGGATTAAAATAAATAGAACAAAAAGGGAAATTTGACAGGGTAGAATGTAGCATATATGTGACACGTGTTTTTGAGGGTACGATGTGCTTAGATTTTCTACGAGTGGCTCAGTGTGTCACTGCTAAAAGGGATATTAGGCGTCATTAATTTGTACAAGGAGCATAGGCTTCCAGTTCAGTGAGATTAGGCAGAAAAAGTAGTCCGACGCAAAAGAGAGATTAGGGAGAAAAGTAAAATCAATTTAGAGAGCGCCTTGAGCTAATAAGTTTTGATAGCTATGACCCATGAAGTTAAAGGGTATCTGAGAGGTACATATATAGAAGTTGGTTGATTGGAGGGAAGCTACTTGGAAGAAGAGGGACACTCTCCAGAAAGAATGGGCTTTGCTACAACAATTAGAATTTGTTTCTCTTTCAGTCTTTCATTAAGGCTTCATAGATGTTAGTTGGATGGGTCTTTTTGATATTAGTATGGGTACTCATACGGCATTCATGAATGAGTCTTGTATTTTTGTTAAAGCCAAAGATAGCCAAGTACTTTTGTTTTGATTATCTTGATTTGATTTAATAATAGAAATCCTTAAAGAAGAAAAAATATAAGTAGTTAATTTAGAATTTCCTGTCCTTGGAGAGAAGCAAAAACAAAGAGAATTCAGCGGAGGCAAAAGAACTAGGTGATTCTTCCCATCTATCTAGCCTTGGTGGATAGAGTTATCTGAACCTTTTGCTGGTGGGAGGTGGCGGTATCCCGTGGAATCAGTTCAGGTGCATGAAAGTTGACCTGGACACCACAGTCATATAAAAACAAGAAAGAGAAATTGTATGAGAGTAATATATAGTTATTGTATGTACTGAGTATTGGTTGCGAATAGTATGTCGTTGGTTTGCTTGATGGAAGTTGAAGGCATCGGATGCCGTTCATGTGCTGCTCATCCATTGGGGCGTGATAACGTTTGTTGGGGTGATGTTGATAGTAATCAAAACATTATTACTTTCCGTGGGACTTGGCTACATTTGGCGCATAGACCTTTCCAACATGGAGTTAGAATATTCAGACATGCTTAGAGGCTTATGGCTCTCTGTCAAGAGGAAGCAAAGTTGTGGATTTGATGGGCTATTTGATGGATTCGAACATACCTACACTCACCTTGCTAAGTAGGTCAAGATAGGGTGGTGTAGGGCCTGAAAGGACATGCCTCTGTCTATGACTCCTGGCTCCCAGCAGAGTAGTTCACATCAACAACATACCTAGTGAAATTCCACAAGTGGGGTGTGGGAGGGTAGAGTGCACGAAGACCTTACCACTATCTCATGGAGAGTAGTTTACATAAGTATAGTAATATGAAGACTGGAGAATATATCCCAGGTTTGGTTTGATCCCTTCATTTTAAATAATGGACTTCTCCAACATTTTTTCTCACAGTAGTGCTCCAAAAGTTTCTTGGGTTTCCTGGAAATGAGATTGAGTGCCTTATTATTTTCTCTCACCAATTGCTGGTCCTTGTTGGATAAGAGGACTTAGCTCCTTCAGGTCGGGGCTTTCAGTTGAGGATTTTCTGTGGATCTACTCCTTTTTACATTAAGATGAAAAGTGTCCTTTTGGTGGAGCTAGTTGCATGTATAAATATGAAGCAGCCGAATCTTATCCTTATTTAGCAGAGGATGTTGGAAGGGTTGGGCAAAGCACTTAATATGGAGCTATAGTGTGTTGCCATGAAGGTGTGCAAATTTATCAGGCAAATTCAGGCTTAGCACCTGCAAACTCTTTATTACTGTGATTTGCATTTGACCATTCATAATCACAATTGCAATATATGTTTTCATGCTAACAAAGATTCTTACAATCATACTTGGATACAGACATGGTTTTGATTTTCCCTTAAACTGCTTGAACTGTGTTCTATTGATTCGAGTTTATTTGGCATGTATGTTAACTGCTGTAACCAACCAACCTCAGGAAAACTGAACTTCACCAGGTTGCCCAACAGGCTTCCAACATTGAAGATCTGAGTGAAGTCATCCGGACATCACTATCAGTCATGTCTAAAATATGGTCCGATGCTATGCATACATTTCACGAGAAGTTCAATGCTGTATCCACATTGATCGCTGATCATGGTAATGCTCAAAATCCAAAACTCAACCTTAATGGTTTCCTTCTCTTCTGCGTTGATGTTAAACTTCTGTTTTCCATTTTTCGCCTAGGACTTGACTCTACTCCTCAGGATGAGTTTCTA</genome_strand>
        <mrna_strand>ATAGTGGCTTCATGGATGATGGAGAGGATTCTTTCCAGGAGCTATCAAATTCTTCACATCAAAGATATAACATTTTATGTAGCGGGGACAAGGATGGAAGTATCTGCTTCAATATCTTTGGCATATTTCCAATAGGGACAGTT.................................................................................................................................AATATACACAACCTTGTTGTCTCCAGTTCACTCTCAAGCAGCAATGTTGCTAGCCGACTTCTGAATGCTTCCATTTGTAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCCTTGTCCAAAGATCTTTGCCATTTAGTAGTTTTGTGCAATGGGGAGCTGATCACAGATGAGGTTGATCAAGGTGAAGGACATCATGGGTTACTTGGCTTTCACTGCTTAGTCCTCAATACTTCAATATTTTCCAAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAACTGAACTTCACCAGGTTGCCCAACAGGCTTCCAACATTGAAGATCTGAGTGAAGTCATCCGGACATCACTATCAGTCATGTCTAAAATATGGTCCGATGCTATGCATACATTTCACGAGAAGTTCAATGCTGTATCCACATTGATCGCTGATCATG.......................................................................................GACTTGACTCTACTCCTCAGGATGAGTTTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E690702" ref_strand="+" ref_description="SGN-E690702 [LH_Ea04D04]">
      <seq>cgtaaagggccttggacgtgatttgagcaaaggggacagctttaaagatcccatagaagcggccctcttatgtattcctgatggatatcactgcattgatctctcgctttataaagagggtcaaattgttttactattaaacgaaactgcaaccacttctgagatttctggaaatgctttcatgatgattctacaagctggtgatctttcatttgtatctctttcaagatctaccgcccccaattcttggaagcttcacgaacttcaggattctgctatatacctgcaactggagagtgaaaaggttcgaagcattcctcattctgtggtctctcccttggcagttagtgcatcaagaggtgtagcttgtgtttttgctgcaagaaagcgtgctttggtttacatcttggacgaagatgaagatgaagtttctgatacagagtgacagtaccttgctgttcgctgggtcttttgcaggatctatcaattttgggtagataaagccagtgcctatccctttttactaaattgtagactctttgtacacttctagttaatagttattagttggatgatgttaaagctgaagaatcaacaaaattctacttcacattgaaaaatgaaaatatatttaatttgaaannaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="69068" stop="71055"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69367" g_stop="69481" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="0.896"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69482" i_stop="69574" i_length="93">
            <donor d_prob="0.980" d_score="0.98"/>
            <acceptor a_prob="0.783" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69575" g_stop="69727" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="268" r_length="153" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69728" i_stop="69948" i_length="221">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69949" g_stop="70030" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="350" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="70031" i_stop="70479" i_length="449">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.683" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70480" g_stop="70741" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="613" r_length="263" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="645" polyA_stop="668"/>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E690702" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E690702" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69367" e_stop="69481"/>
          <exon e_start="69575" e_stop="69727"/>
          <exon e_start="69949" e_stop="70030"/>
          <exon e_start="70480" e_stop="70741"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCAGGGGCCTTGCACGTGATTTGAGCAAAGTGGACAGTATACGTGATCCCATAGAAGCGGCCCTCTTATGTATTCCTGATGGATATCACTGTATTGATCTCTCGCTTTATAAAGTAAGTGGAAAATTCCCACCTGATGTTAATTTTCTATAACCTACAGCTTTCTAACCCTTGAACTGCTATTTAACATTTCATCATTCAAAGCAGGAGGGTCAAATTGTTTTACTATTAAACGAAACTGCAACCACTTCGGAGAGCTCTGGAAATGCTTTCATGATGATTCTACAAGCTGGTGACCTTTCATTTGTATCTCTTTCAAGATCTACCGCCCCCAATTCTTGGAAGCTTCACGAACTTCAGGTATATGACATCATTACTCTACCAGGAAATAATCTGCGTAAATTTCTCTTGGAAATTCTGTATCCAATGACATGCATTCTAGTTTGTTATGTTGGACGGATTGTCCATTGCGTCACTGAGTTTGAAATAGATGAAGGTGTATATACACGTGCTACATGGTTTGTTATTCTGAAGTCTGAACGTCAGAAACTAATTGACCTTTTTATCTGCATGATATCTAGGATTCTGCTATATACCTGCAACTGGAGAGTGAAAAGGTTCGAAGCATTCCTCATTCTGTGGTCTCTCCCTTGGCAGTTAGTGGTGAGTGGTTATATTTGTACTTTTTTGGGTGCCAACTGTTGTTAGTATCTATAGGAAAAGAGGCTAACACATTCATGAGAACTAACCAAGAACCTAAAATGTTTAATCGCTTGATACCAAAAATGAATACATCTGAACACCATTGTTCCTACTCATTTGAAGGCCGAAACACCTATTTCTTTGTCGATTAGAACTTCAGTTTCAAGCTAAGCTAAGCTAATGGTATTTAGAGAATCTAAAATCTTTATCTCCCCCCCACCCCCGGGATAGCTAATAGAGCCAGTGTGAATTTGAAATGCACTTAAAACTAGAATCCCGTAATGACAGATGGAATTTCATCCAAATACACATGATATTGTTGTTAACAGTTTTCTTGTAATATGGATGACTAATGCTAGACACTTACTTACCAAGAGATTTGACATTTTCAATATGATTTTCTCTATCAGCATCAAGAGGTGTAGCTTGTGTTTTTGCTGCAAGAAAGCGTGCTTTGGTTTACATCTTGGACGAAGATGAAGATGAAGTTTCTGATACAGAGTGACAGTACCTTGCTGTTCGCTGGGTCTTTTGCAGGATCTATCAATTTTGGGCAGAT-AAGCCAGTGTCTATCCCTTTTTACTAAATTGTAGACTCTTTGTACACTTCTAGTTAATAGTTATTAGTTGGATGATGTTAAAGCTGAAGAATCAACAAAATTCTACTTCACAT</genome_strand>
        <mrna_strand>CGTAAAGGGCCTTGGACGTGATTTGAGCAAAGGGGACAGCTTTAAAGATCCCATAGAAGCGGCCCTCTTATGTATTCCTGATGGATATCACTGCATTGATCTCTCGCTTTATAAA.............................................................................................GAGGGTCAAATTGTTTTACTATTAAACGAAACTGCAACCACTTCTGAGATTTCTGGAAATGCTTTCATGATGATTCTACAAGCTGGTGATCTTTCATTTGTATCTCTTTCAAGATCTACCGCCCCCAATTCTTGGAAGCTTCACGAACTTCAG.............................................................................................................................................................................................................................GATTCTGCTATATACCTGCAACTGGAGAGTGAAAAGGTTCGAAGCATTCCTCATTCTGTGGTCTCTCCCTTGGCAGTTAGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAGAGGTGTAGCTTGTGTTTTTGCTGCAAGAAAGCGTGCTTTGGTTTACATCTTGGACGAAGATGAAGATGAAGTTTCTGATACAGAGTGACAGTACCTTGCTGTTCGCTGGGTCTTTTGCAGGATCTATCAATTTTGGGTAGATAAAGCCAGTGCCTATCCCTTTTTACTAAATTGTAGACTCTTTGTACACTTCTAGTTAATAGTTATTAGTTGGATGATGTTAAAGCTGAAGAATCAACAAAATTCTACTTCACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E694542" ref_strand="+" ref_description="SGN-E694542 [LH_Ea04D04](-)">
      <seq>caggggccttgcacgtgatttgagcaaagtggacagtatacgtgatcccatagaagcggcccttttatgtattcctgatggatatcactgcattgatttttcgctttataaagagggtcaaattgtttttctattaaacgaaactgcaaccacttttgagatttttggaaatgctttcatgatgattttacaagctggggatttttcatttgtatttttttcaagatttaccgcccccaatttttggaagcttcacgaacttcaggattttgctatatacctgcaactggagagtgaaaaggtttgaagcattcctcattttgtggtttttcccttggcagttagtgcatcaagaggggtagtttgtgtttttgctgcaagaaagggtgctttggtttacattttggacgaagatgaagatgaagtttttgatacagagtgacagtaccttgttgtttgctgggttttttgcaggatttatcaattttgggtagataaagccagtgcctatccctttttagtaaattgtagactttttgtacccttttagttaatagttattagttggatgatgttaaaagggaagaatcaacaaaattttacttcccctgnaacataaaaaatatattttatttgcaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="69070" stop="71041"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69370" g_stop="69481" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69482" i_stop="69574" i_length="93">
            <donor d_prob="0.980" d_score="0.92"/>
            <acceptor a_prob="0.783" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69575" g_stop="69727" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="265" r_length="153" r_score="0.908"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="69728" i_stop="69948" i_length="221">
            <donor d_prob="0.988" d_score="0.92"/>
            <acceptor a_prob="0.929" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69949" g_stop="70030" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="347" r_length="82" r_score="0.939"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="70031" i_stop="70479" i_length="449">
            <donor d_prob="0.975" d_score="0.92"/>
            <acceptor a_prob="0.683" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70480" g_stop="70739" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="608" r_length="261" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="638" polyA_stop="665"/>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E694542" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="0.913" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E694542" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69370" e_stop="69481"/>
          <exon e_start="69575" e_stop="69727"/>
          <exon e_start="69949" e_stop="70030"/>
          <exon e_start="70480" e_stop="70739"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGGGCCTTGCACGTGATTTGAGCAAAGTGGACAGTATACGTGATCCCATAGAAGCGGCCCTCTTATGTATTCCTGATGGATATCACTGTATTGATCTCTCGCTTTATAAAGTAAGTGGAAAATTCCCACCTGATGTTAATTTTCTATAACCTACAGCTTTCTAACCCTTGAACTGCTATTTAACATTTCATCATTCAAAGCAGGAGGGTCAAATTGTTTTACTATTAAACGAAACTGCAACCACTTCGGAGAGCTCTGGAAATGCTTTCATGATGATTCTACAAGCTGGTGACCTTTCATTTGTATCTCTTTCAAGATCTACCGCCCCCAATTCTTGGAAGCTTCACGAACTTCAGGTATATGACATCATTACTCTACCAGGAAATAATCTGCGTAAATTTCTCTTGGAAATTCTGTATCCAATGACATGCATTCTAGTTTGTTATGTTGGACGGATTGTCCATTGCGTCACTGAGTTTGAAATAGATGAAGGTGTATATACACGTGCTACATGGTTTGTTATTCTGAAGTCTGAACGTCAGAAACTAATTGACCTTTTTATCTGCATGATATCTAGGATTCTGCTATATACCTGCAACTGGAGAGTGAAAAGGTTCGAAGCATTCCTCATTCTGTGGTCTCTCCCTTGGCAGTTAGTGGTGAGTGGTTATATTTGTACTTTTTTGGGTGCCAACTGTTGTTAGTATCTATAGGAAAAGAGGCTAACACATTCATGAGAACTAACCAAGAACCTAAAATGTTTAATCGCTTGATACCAAAAATGAATACATCTGAACACCATTGTTCCTACTCATTTGAAGGCCGAAACACCTATTTCTTTGTCGATTAGAACTTCAGTTTCAAGCTAAGCTAAGCTAATGGTATTTAGAGAATCTAAAATCTTTATCTCCCCCCCACCCCCGGGATAGCTAATAGAGCCAGTGTGAATTTGAAATGCACTTAAAACTAGAATCCCGTAATGACAGATGGAATTTCATCCAAATACACATGATATTGTTGTTAACAGTTTTCTTGTAATATGGATGACTAATGCTAGACACTTACTTACCAAGAGATTTGACATTTTCAATATGATTTTCTCTATCAGCATCAAGAGGTGTAGCTTGTGTTTTTGCTGCAAGAAAGCGTGCTTTGGTTTACATCTTGGACGAAGATGAAGATGAAGTTTCTGATACAGAGTGACAGTACCTTGCTGTTCGCTGGGTCTTTTGCAGGATCTATCAATTTTGGGCAGAT-AAGCCAGTGTCTATCCCTTTTTACTAAATTGTAGACTCTTTGTACACTTCTAGTTAATAGTTATTAGTTGGATGATGTTAAAGCTGAAGAATCAACAAAATTCTACTTCAC</genome_strand>
        <mrna_strand>CAGGGGCCTTGCACGTGATTTGAGCAAAGTGGACAGTATACGTGATCCCATAGAAGCGGCCCTTTTATGTATTCCTGATGGATATCACTGCATTGATTTTTCGCTTTATAAA.............................................................................................GAGGGTCAAATTGTTTTTCTATTAAACGAAACTGCAACCACTTTTGAGATTTTTGGAAATGCTTTCATGATGATTTTACAAGCTGGGGATTTTTCATTTGTATTTTTTTCAAGATTTACCGCCCCCAATTTTTGGAAGCTTCACGAACTTCAG.............................................................................................................................................................................................................................GATTTTGCTATATACCTGCAACTGGAGAGTGAAAAGGTTTGAAGCATTCCTCATTTTGTGGTTTTTCCCTTGGCAGTTAGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAGAGGGGTAGTTTGTGTTTTTGCTGCAAGAAAGGGTGCTTTGGTTTACATTTTGGACGAAGATGAAGATGAAGTTTTTGATACAGAGTGACAGTACCTTGTTGTTTGCTGGGTTTTTTGCAGGATTTATCAATTTTGGGTAGATAAAGCCAGTGCCTATCCCTTTTTAGTAAATTGTAGACTTTTTGTACCCTTTTAGTTAATAGTTATTAGTTGGATGATGTTAAAAGGGAAGAATCAACAAAATTTTACTTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E549124" ref_strand="+" ref_description="SGN-E549124 [TUS-67-I10](-)">
      <seq>gcatattatcgatcttggaatttggtttgacaatccatatgcatctggtgctgggttgggctcaatctgaacctaggagcctcttataatgtacagttatgcctgtccatggagattgctctctctccattaacagaataacataagcttatgatagttctctcagcatattatatgcagttcaaagactggagcagttttcatggctctagctgaagggaaattcccatggtttagacctgatttcttctactagggactgaaggaagtgacttcatttgccttgtgctaactcaagattgtagcaagtatgttttgatgagttatgtttgactgatgctgtaatttttagtgttttgttgtaatgagtttatcaaaagaaaacataatatttgtctcatagaaacatttgttgtgaacatatcattaaaatgtgatgtggtaaaccttcaanaaatttgttatatgaacgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="71780" stop="70704"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71480" g_stop="70998" g_length="483"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="483" r_length="483" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E549124" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E549124" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71480" e_stop="70998"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATATTATCGATCTTGGAATTTGGTTTGACAATCCATATGCATCTGGTGCTGGGTTGGGCTCAATCTGAACCTAGGAGCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGATTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTCATAGAAACATTTGTTGTGAACATATCATTAAAATGTGATGTGGTAAACCTTCAA-AAATTTGTTATATTGAACGAATAATCTTGT</genome_strand>
        <mrna_strand>GCATATTATCGATCTTGGAATTTGGTTTGACAATCCATATGCATCTGGTGCTGGGTTGGGCTCAATCTGAACCTAGGAGCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGATTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTCATAGAAACATTTGTTGTGAACATATCATTAAAATGTGATGTGGTAAACCTTCAANAAATTTGTTATA-TGAACGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E544935" ref_strand="+" ref_description="SGN-E544935 [TUS-67-I10]">
      <seq>gcatattatcgatcttggaatttggtttgacaatccatatgcatctggtgctgggttgggctcaatctgaacctaggagcctcttataatgtacagttatgcctgtccatggagattgctctctctccattaacagaataacataagcttatgatagttctctcagcatattatatgcagttcaaagactggagcagttttcatggctctagctgaagggaaattcccatggtttagacctgatttcttctactagggactgaaggaagtgacttcatttgccttgtgctaactcaagattgtagcaagtatgttttgatgagttatgtttgactgatgctgtaatttttagtgttttgttgtaatgagtttatcaaaagaaaacataatatttgtctcatagaaacatttgttgtgaacatatcattaaaatgtgatgtggtaaaccttcaaaaatttgttatattgaacgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="71780" stop="70704"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71480" g_stop="70998" g_length="483"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="483" r_length="483" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E544935" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544935" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71480" e_stop="70998"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATATTATCGATCTTGGAATTTGGTTTGACAATCCATATGCATCTGGTGCTGGGTTGGGCTCAATCTGAACCTAGGAGCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGATTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTCATAGAAACATTTGTTGTGAACATATCATTAAAATGTGATGTGGTAAACCTTCAAAAATTTGTTATATTGAACGAATAATCTTGT</genome_strand>
        <mrna_strand>GCATATTATCGATCTTGGAATTTGGTTTGACAATCCATATGCATCTGGTGCTGGGTTGGGCTCAATCTGAACCTAGGAGCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGATTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTCATAGAAACATTTGTTGTGAACATATCATTAAAATGTGATGTGGTAAACCTTCAAAAATTTGTTATATTGAACGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E309425" ref_strand="+" ref_description="SGN-E309425 [cLEY-22-N12]">
      <seq>atcgatcttggaatttggtttgaccaatcacatgccatctggtgcctgggttgggctcaatctgaacctaggagccctcttataatgtacagttatgcctgtccatggagacttgctctctctccattaacagaataacataagcttatgatagttctctcagcatattatatgcagttcaaagactggagcagttttcatggctctagctgaagggaaattcccatggtttagacctgatttcttctactagggactgaaggaagtgacttcatttgccttgtgctaactcaagattgtagcaagtatgttttgatgagttatgtttgactgatgctgtaatttttagtgttttgttgtaatgagtttatcaaaagaaaacataatatttgtctcatagaaacatnttgttgtgaacatatcattaaaatgtgaatgtggtaaaccttcaaaaatttgttatattgaacgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="71773" stop="70704"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71473" g_stop="70998" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="482" r_length="482" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E309425" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309425" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71473" e_stop="70998"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGATCTTGGAATTTGGTTTGACAATCCATATG-CATCTGGTG-CTGGGTTGGGCTCAATCTGAACCTAGGAG-CCTCTTATAATGTACAGTTATGCCTGTCCATGGAGA-TTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTCATAGAAACAT-TTGTTGTGAACATATCATTAAAATGTG-ATGTGGTAAACCTTCAAAAATTTGTTATATTGAACGAATAATCTTGT</genome_strand>
        <mrna_strand>ATCGATCTTGGAATTTGGTTTGACCAATCACATGCCATCTGGTGCCTGGGTTGGGCTCAATCTGAACCTAGGAGCCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGACTTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTCATAGAAACATNTTGTTGTGAACATATCATTAAAATGTGAATGTGGTAAACCTTCAAAAATTTGTTATATTGAACGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E746149" ref_strand="+" ref_description="SGN-E746149 [GI|47104905]">
      <seq>ggagaaaaaaagaagaaaattttgagtctcactatacgaaacagactgttgaataatcaaacaaagaaaaaagaaagaaactttagatcagatctgaaaatttgaataagaggagtgttttaatagtcaaagaaaatgcagacaaggtatatggagaaacgtgttttggatccaagtagtagtgaggaaggtcaacctgataggaaaagacctgctcttgcaagtgtcattgttgaagcgctaaaggtggacagtctgcaaaaactctgctcatcactggagccaattcttcgaagagttgttagtgaagaagtggagcgtgctttggctaaacttggacctgctaaacttaatgcaagggtttcgccaaaaagaattgaaggacctgatgggagaaatttgcagcttcagtttcggtccaaactgtcactacctctcttcactggaggaaaagtagaaggagagcagggttccgcaatacatattgtcttgattgatggaaatacaaaccatgttgtaacatcaggtcccgagtccttggttaagttagatgttgttgtgcttgaaggagattttaacaatgaggatgatgatggctggactcaagaagaatttgagtctcatatcgtcaaggagcgtgaaggcaagaggcctctccttactggagaattgcaagtgatattgaaggaaggtgttggcacccttggcgagttgacatttactgacaactccagctggatcagaagcagaaagttcaggctaggcttaaaggtggcatcaggttgctgtgagggaatccgcattcgtgaggcaaaaacagatgccttcactgtcaaggatcatagaggagaattgtacaagaaacattatccacctgcattagatgatgaagtttggagattggaaaagatagggaaagatggatccttccacaagaggctaaataaagctggcatacataaagtggaagactttctgcgtcttgttgtgagagactcgcagaggctccgaaatgtcctgggaagtggaatgtcaaataaaatgtgggatgctcttctggaccatgcaaaaacctgtgtactaagtgggaagctatatgtctactatcctgatgatatgagaaatgtcggtgttgtttttaataatatctatgaattatgtggtttaatctctggcggacagtatcattcaatggattctctttcaggcaatcagaagatatatgtggatactttagttaagaaggcgtatgacaactggatgcaagttgttgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcagaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgctgctagcacgcctaatccttataagggagctgaggacttcttaacagaggaagagatacgtatgaaaagtcatgagatgctcgaaaatgaagacatgcaacatttgctacgtatgttcagcatgggacagggtcatgcgtcttctagtgttgcagaagagaattaccagtatggatcagcatacatgcccagcatgtcttctaattttggttttgatgaggaacgtacacgttcttcaggtaaggctgttgtagggtggctcaaactcaaagctgccttgagatggggcattttcataaggaagaaagctgcagaaagaagagcacaaattactgaactggatgactcttagatttgattttccccttagcaaccacttggatatgatgtgtaagggctttcctctaagaagcatattatcgatcttggaatttggtttgacaatccatatgcatctggtgctgggttgggctcaatctgaacctaggagcctcttataatgtacagttatgcctgtccatggagattgctctctctccattaacagaataacataagcttatgatagttctctcagcatattatatgcagttcaaagactggagcagttttcatggctctagctgaagggaaattcccatggtttagacctgatttcttctactagggactgaaggaagtgacttcatttgccttgtgctaactcaagattgtagcaagtatgttttgatgagttatgtttgactgatgctgtaatttttagtgttttgttgtaatgagtttatcaaaagaaaacataatatttgtctccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="78273" stop="70773"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77974" g_stop="77751" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="224" r_length="224" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77750" i_stop="76628" i_length="1123">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76627" g_stop="76552" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="300" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76551" i_stop="75707" i_length="845">
            <donor d_prob="0.710" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75706" g_stop="75648" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="359" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75647" i_stop="74768" i_length="880">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74767" g_stop="74274" g_length="494"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="853" r_length="494" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="74273" i_stop="74188" i_length="86">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74187" g_stop="74027" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="854" r_stop="1014" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="74026" i_stop="73932" i_length="95">
            <donor d_prob="0.854" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="73931" g_stop="73728" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="1015" r_stop="1218" r_length="204" r_score="0.995"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="73727" i_stop="72921" i_length="807">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="72920" g_stop="72683" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1219" r_stop="1456" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="72682" i_stop="72085" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="72084" g_stop="71082" g_length="1003"/>
          <reference_exon_boundary r_type="cDNA" r_start="1457" r_stop="2459" r_length="1003" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2461" polyA_stop="2475"/>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E746149" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2459</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E746149" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77974" e_stop="77751"/>
          <exon e_start="76627" e_stop="76552"/>
          <exon e_start="75706" e_stop="75648"/>
          <exon e_start="74767" e_stop="74274"/>
          <exon e_start="74187" e_stop="74027"/>
          <exon e_start="73931" e_stop="73728"/>
          <exon e_start="72920" e_stop="72683"/>
          <exon e_start="72084" e_stop="71082"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAGGTAATTTGATTTTTAAAAAAATGTTTTTTTTTTAGACTTTTTGTTGAGGGGTATTTTTTCTTTTGGTCTTGTTTTATGTATTATAGCAAATTTTAGTACTGAACAATGCAGTTGGTTTGTTTGAATGATTGGTTATTATGAAAGGTTTTGCTGGGAATATTTGTTGGTTTGAAGAAATTGTAGAGTTTGGGTATTGCAAAAATTATTGTGGAAAGGGGAGAATGGTGATTCTGTTTTGTTGGGGTGGTGGTGAATTAAAATTTTTAGTAAGAAAAATGTGATCTTGATGAATTATGTGTGACGAATGAGGTATTATTATCAAGATCCTTGGAGAGAAGAGAGTGGGAAGCTTTATTGTCTGGTTGTTTGGTGTTGACTGCAAGTGAAGGAAGTTTTTTGATTGAATCTGGCTTGATAACTAGCTTGCTCTTTGTTTTGGTTTATGAGAGAAAAATGAGTATTTTGCTTTGTCATAACTACAAACAATCTACTATTTGATCAGCTGTGGCACTGAAAGAAGAGATTTATAGTGGTTAATTCATGATTCCTTTTTAAGATTTGTGTCATTCGAGGAGGTGATTTGAAGGATTTTGATCATGTTGCAAATAACTTACAATGAATAACATTACATGACTGCCCCTGTCACAGCCCCACAGGACAGAAAGTGGTCCACTAGATCAACTTTTAAATGGGATCTTCACTGTTGGTTGCCAATAAGATTATCCACATTTCATATTCTCAATCATCATTCAGAGGGGAAGTTGTCTCGGTATCCTGCCGGGGACATACTTGAGATTTCTAAGGGAAGTCATTACCAGGTGTTTGTAATCCTGCAAACACTTGTAGCTTTCTCTGAGTGTCTAAGTGATAGATTGATGGTCCACTCTACCCTTTTCTTTTTCTCTTAGCAAGTGATCAGAAAAAAGCTTTTCATTTTAGAGGTTTTTATTTCTGTTGATTGTTTGTTGTGGTATCATCTGACCTGACATCATGTGACCTGGATGTCTTATATTTTCTTAGAGAAGCTGAAATTCAGTGCCCTGTTATAGCTTTACTCATCTTTCTGTGCACTGTTCATGTTAACTGTTGCACACCCTTATTGAAAAGTACATGGTTACTGCAGTGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTTGTAAGATTATTAGGCCCCCTTTAGAACTCTCATCCTATTCATTGGGCATTACTTATGTGAAATTTCATTTAACCAACCAACCACTCCATGGTAACTTGTGAAAGTTTGGTTTTCAATTACATAACTACTGTGGCATGATACATATTTCCAGAAGACTCAGCATGACAGATATTTTACTTCTGAAGGAATACAATGAAATAATCGTAACTGCAAGCTTTGTGACTATACAGGCCAAGTAAAGCCACTGCCAGATATTTGAAATGGATATGTCATTGTTTTGTGTAAAACCATTTATTTCATATGCTGAAATATTTTTTCAAACTATTTGTGCTTTGATCATTGTAGCAGTTACACTGAGAAACCCCTCCCCCCTCCCTCTCTCTCACCAGCGAGAGCTGTCTCCATATCCTGCTTATATGCATAGTTTCTGGAGATAAGTAGCTTTAAATTTTCCTGTCAAGAGCTTACTGAGTGCAGAAATTTACTTCTGTCTTTATTTTTGATGTGAACAACATATTTTAAGCATGTCTGCGCTCCAGGTGACCTTTTAGCAGTTCTTCTCTTGGACTCAAAATGTATTTGAGTTGGTAGTAAAAAGACTTTTGCGTGTTACCATGGCTTTATTCAACTTTTAGCTGTAAGAGCTAAGATATTAATGTCTTATGTACATTTACTTGAAACATTTGGATTCGATGGGCTTGTCACCAGCCCATCGAATGCTAATATTTTATGTGATTGGGATGACTAGACTATGCAAACATGTCCATTCGTGTTTTATTTGTACAAGGTTTCTTCTATAGTGGCTTTTGTTTACTTATTTATGAATGTCCATTTTTGTTTACCAGGTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAGGTATGGTTTCACATATCATCACTCAAACCTTTCAGAGCACAAATCTGATTCCCATATTTTGTCAGGATATTTGCATGTATGGGAAATATCCCATCACTCATCAGAGTCATTTGGTATATCCAATTGTGAACTGGTCAATGTTTAACTGAATTAGAGTGGGATATGAATTGTAGATGTTGGAAACACTTGAGGGGAGGTTTCCCTGGTCTTGTGCAATTATATATTTAGATTTAGGTAAGGTCAATATTTGTTACAGCAGTCAATCCCTATGATTAATGGGAGTGTGGGAGGGTTTGAGCACTTGCTGCAGCCAGAGTCAAAGGTAGATTAGTGAAACTAGTTACAGATGCAGGAAGTCAATTTAGGAAAGAACTAAATCTTAATAATGCTTTTAGAGTTTTGAAAAAGAGTTTTGCTAACATGAACCACAGACTACTAAAACCATTTACATGGACATGGTCCTATGTGTCTATCAGATTGTAATTGACTATTTATTTTGTTTGATATGCTTCTTATTATATAAGTTCCATGGTATTAAACCTTCTCACAGGGAATATCCTTCTGCTTCAGCGGTTTGTATGAGTCATTCTGACTTCTAGTTCATTTCAGTGCTAGAGCAGATTGATTTTCCCAATACTATGTGTGAAATGTGAAAAGACTTTTAGCAAGTCTCCTTCCCATTGGATACTGATCAAAGAATTGACCTAATATGCCAAACATTAGCATGACTATGAAGTGCAGTGTGAGGATGTGACCCCTAATTCAATTTTGCATCAAAGATCAATCTATGCCTATGCTTGCTTGAGCTGTTCATGTACTCCATTTTCTATAATTGAATGTTCACCCTGTTCCGGGATTGAATTTTGTGATAATTATGCAGGGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCCAGCTGGATCAGAAGCAGAAAGTTCAGGCTAGGCTTAAAGGTGGCATCAGGTTGCTGTGAGGGAATCCGCATTCGTGAGGCAAAAACAGATGCCTTCACTGTCAAGGATCATAGAGGAGAATGTAAGCCCATATAATGTGTCTTTTGTATAGAAATGACAATTATGTTTGTTGAGGTTTGTAGTAACTCCAATCTTGTTTCCTTGCAGTGTACAAGAAACATTATCCACCTGCATTAGATGATGAAGTTTGGAGATTGGAAAAGATAGGGAAAGATGGATCCTTCCACAAGAGGCTAAATAAAGCTGGCATACATAAAGTGGAAGACTTTCTGCGTCTTGTTGTGAGAGACTCGCAGAGGCTCCGAAATGTAAAATTTCAAACTTGACATGTTGGAGAAAAAGAACTATAATTGTTAGTTGTAACTATATGATTAGTTTTTTGTTAATCATCTTGTTATCTCAGGTCCTGGGAAGTGGAATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAGGTTTGTAATCTGTAATTATTTTCTCTCTTTTGTATAATTTGGTATTGTGGATTCATCTAGACATGCTTAAGGGAAAATGAAGAAGGAAGACATGGGGGCTATGGTTTCCCATGCTTACCCAACCATCTTTTACAATGGATTACCAAGAGCTTTTTTTTCTCCTATCTGTGGCGTTTTGTGAAGTGACTACTCTTCAAGAAGCAAAACACATTCATTTTCATGTTTGTCTCCTCCCAGATCACATCTAGAAGAGATTTACTAACAAAAGTCCCTCAGAACAAACTTTCCTGCTTGCTACAGTTCGAAAAAACTTTTTCTTAGAAATTTAGCTGTTTGTAACTTAGAGATATATCTGCCAAGTTCTTATGGGATATTATCCAGAAATTAGTTGCTGAAGCAATGAAATGCCTTTGATTTAGCTTCTCTGTTCTTTTTCTACCTTTTACAGGCAATAGTTAGAAGGATACAAACTGCTGATTCTGTAAAAATTGATTACAATGAAATTTCCGAAGGCAATGTTGTACCCTTCGAGTTGCTTTGTATATATAGAATATTCAACCCTTTTGACCATATCCAAACAATATTTACAACTAATTTTATTTGATACTGCTAGAATTGCCACACTAGTTAGATGCGGTTTGCACTTTCTCCTTTGTCCCTGTGACATTTCGATACTTCACATAATAGTGGTCAATGGAGTTGTGAGAGTTGCTATCATTTGCATAAATCGACCTTTTTTGGATGATAGTTCTTTTTTTCCCGAGTTTATGATGAAGTTATTAAGCAAACATCAAACAAAATTTGCAGATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGATGAGGAACGTACACGTTCTTCAGGTAAGGCTGTTGTAGGGTGGCTCAAACTCAAAGCTGCCTTGAGATGGGGCATTTTCATAAGGAAGAAAGCTGCAGAAAGAAGAGCACAAATTACTGAACTGGATGACTCTTAGATTTGATTTTCCCCTTAGCAACCACTTGGATATGATGTGTAAGGGCTTTCCTCTAAGAAGCATATTATCGATCTTGGAATTTGGTTTGACAATCCATATGCATCTGGTGCTGGGTTGGGCTCAATCTGAACCTAGGAGCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGATTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTC</genome_strand>
        <mrna_strand>GGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAATAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCCAGCTGGATCAGAAGCAGAAAGTTCAGGCTAGGCTTAAAGGTGGCATCAGGTTGCTGTGAGGGAATCCGCATTCGTGAGGCAAAAACAGATGCCTTCACTGTCAAGGATCATAGAGGAGAAT......................................................................................TGTACAAGAAACATTATCCACCTGCATTAGATGATGAAGTTTGGAGATTGGAAAAGATAGGGAAAGATGGATCCTTCCACAAGAGGCTAAATAAAGCTGGCATACATAAAGTGGAAGACTTTCTGCGTCTTGTTGTGAGAGACTCGCAGAGGCTCCGAAAT...............................................................................................GTCCTGGGAAGTGGAATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGGCAATCAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGATGAGGAACGTACACGTTCTTCAGGTAAGGCTGTTGTAGGGTGGCTCAAACTCAAAGCTGCCTTGAGATGGGGCATTTTCATAAGGAAGAAAGCTGCAGAAAGAAGAGCACAAATTACTGAACTGGATGACTCTTAGATTTGATTTTCCCCTTAGCAACCACTTGGATATGATGTGTAAGGGCTTTCCTCTAAGAAGCATATTATCGATCTTGGAATTTGGTTTGACAATCCATATGCATCTGGTGCTGGGTTGGGCTCAATCTGAACCTAGGAGCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGATTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E709353" ref_strand="+" ref_description="SGN-E709353 [FA51CD07]">
      <seq>gccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcacaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgctgctaccacgcctaatccttataagggagctgaggactctcttaacagaggaagagatacgtatgaaaagtcatgagatgctccaaaatgaagacatgcaacatttgctacgtatgttcagccactgggacagggtcatgcgtcttctattgttgcacaagagaattaccactatggatcaaccatacatgcccagcatgtcttctaattttggctttgatgaggaacgtacacgttcttcaggcaaggctgttgtagggtggctcaacctcaaagctgccttgagatggggcattttcataaggaagaaagctgcacaaagaacagcaccaattactgacctggatgactcttaccatttgactttcccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="73014" stop="71241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72714" g_stop="72683" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72682" i_stop="72085" i_length="598">
            <donor d_prob="0.968" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72084" g_stop="71526" g_length="559"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="596" r_length="564" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E709353" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E709353" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72714" e_stop="72683"/>
          <exon e_start="72084" e_stop="71526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACT-TCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAG-CA-TGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATC-AGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGATGAGGAACGTACACGTTCTTCAGGTAAGGCTGTTGTAGGGTGGCTCAAACTCAAAGCTGCCTTGAGATGGGGCATTTTCATAAGGAAGAAAGCTGCAGAAAGAAGAGCACAAATTACTGAACTGGATGACTCTTA-GATTTGATTTTCCCC</genome_strand>
        <mrna_strand>GCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCACAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTACCACGCCTAATCCTTATAAGGGAGCTGAGGACTCTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCCAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCCACTGGGACAGGGTCATGCGTCTTCTATTGTTGCACAAGAGAATTACCACTATGGATCAACCATACATGCCCAGCATGTCTTCTAATTTTGGCTTTGATGAGGAACGTACACGTTCTTCAGGCAAGGCTGTTGTAGGGTGGCTCAACCTCAAAGCTGCCTTGAGATGGGGCATTTTCATAAGGAAGAAAGCTGCACAAAGAACAGCACCAATTACTGACCTGGATGACTCTTACCATTTGACTTTCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E264681" ref_strand="+" ref_description="SGN-E264681 [cLEG-72-E23]">
      <seq>tgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcagaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgctgctagcacgcctaatccttataagggagctgaggacttcttaacagaggaagagatacgtatgaaaagtcatgagatgctcgaaaatgaagacatgcaacatttgctacgtatgttcagcatgggacagggtcatgcgtcttctagtgttgcagaagagaattaccagtatggatcagcatacatgcccagcatgcttctaattttgggtttgatgaggaacgtcacgttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="73167" stop="71358"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72867" g_stop="72683" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72682" i_stop="72085" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72084" g_stop="71658" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="610" r_length="425" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E264681" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264681" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72867" e_stop="72683"/>
          <exon e_start="72084" e_stop="71658"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGATGAGGAACGTACACGTTC</genome_strand>
        <mrna_strand>TGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATG-CTTCTAATTTTGGGTTTGATGAGGAACGT-CACGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E204052" ref_strand="+" ref_description="SGN-E204052 [cLEC-22-M2]">
      <seq>atgaattcatgactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcagaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgctgctagcacgcctaatccttataagggagctgaggacttcttaacagaggaagagatacgtatgaaaagtcatgagatgctcaaaaatgaagacatgcaacatttgctacgtatgttcagcatgggacagggtcatgcgtcttctagtgttgcagaagagaattaccagtatggatcagcatacatgcccagcatgtcttctaatttcggttttgatgaggaacgtacacgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="73007" stop="71359"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72707" g_stop="72683" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72682" i_stop="72085" i_length="598">
            <donor d_prob="0.968" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72084" g_stop="71659" g_length="426"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="451" r_length="426" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E204052" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>451</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E204052" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72707" e_stop="72683"/>
          <exon e_start="72084" e_stop="71659"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGATGAGGAACGTACACGTT</genome_strand>
        <mrna_strand>ATGAATTCATGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCAAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTCGGTTTTGATGAGGAACGTACACGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E344977" ref_strand="+" ref_description="SGN-E344977 [cTOF-22-M2]">
      <seq>tgtctactatcctgatgatatgagaaatgtcggtgttgtttttaataatatctatgaattatgtggtttaatctctggcggacagtatcattcaatggattctctttcagacaatcagaagatatatgtggatactttagttaagaaggcgtatgacaactggatgcaagttgttgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcagaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgctgctagcacgcctaatccttataagggagctgaggacttcttaacagaggaagagatacgtatgaaaagtcatgagatgctcgaaaatgaagacatgcaacatttgctacgtatgttcagcatgggacagggtcatgcgtcttctagtgttgcagaagagattaccagtatggatcagcatacatgcccagcatgtcttctaattttggttttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="74148" stop="71375"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73848" g_stop="73728" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73727" i_stop="72921" i_length="807">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72920" g_stop="72683" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="359" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72682" i_stop="72085" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72084" g_stop="71675" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="768" r_length="409" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E344977" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>769</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344977" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73848" e_stop="73728"/>
          <exon e_start="72920" e_stop="72683"/>
          <exon e_start="72084" e_stop="71675"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAGGTTTGTAATCTGTAATTATTTTCTCTCTTTTGTATAATTTGGTATTGTGGATTCATCTAGACATGCTTAAGGGAAAATGAAGAAGGAAGACATGGGGGCTATGGTTTCCCATGCTTACCCAACCATCTTTTACAATGGATTACCAAGAGCTTTTTTTTCTCCTATCTGTGGCGTTTTGTGAAGTGACTACTCTTCAAGAAGCAAAACACATTCATTTTCATGTTTGTCTCCTCCCAGATCACATCTAGAAGAGATTTACTAACAAAAGTCCCTCAGAACAAACTTTCCTGCTTGCTACAGTTCGAAAAAACTTTTTCTTAGAAATTTAGCTGTTTGTAACTTAGAGATATATCTGCCAAGTTCTTATGGGATATTATCCAGAAATTAGTTGCTGAAGCAATGAAATGCCTTTGATTTAGCTTCTCTGTTCTTTTTCTACCTTTTACAGGCAATAGTTAGAAGGATACAAACTGCTGATTCTGTAAAAATTGATTACAATGAAATTTCCGAAGGCAATGTTGTACCCTTCGAGTTGCTTTGTATATATAGAATATTCAACCCTTTTGACCATATCCAAACAATATTTACAACTAATTTTATTTGATACTGCTAGAATTGCCACACTAGTTAGATGCGGTTTGCACTTTCTCCTTTGTCCCTGTGACATTTCGATACTTCACATAATAGTGGTCAATGGAGTTGTGAGAGTTGCTATCATTTGCATAAATCGACCTTTTTTGGATGATAGTTCTTTTTTTCCCGAGTTTATGATGAAGTTATTAAGCAAACATCAAACAAAATTTGCAGATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGAT</genome_strand>
        <mrna_strand>TGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAG-ATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E262765" ref_strand="+" ref_description="SGN-E262765 [cLEG-63-B20]">
      <seq>gcaagttgttgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcagaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgctgctagcacgcctaatccttataagggagctgaggacttcttaacagaggaagagatacgtatgaaaagtcatgagatgctcgaaaatgaagacatgcaacatttgctacgtatgttcagcatgggacagggtcatgcgtcttctagtggtgcagaagagaataccagtatggatcagcatacatgcccagcatgtcttctaaattttggttttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="73176" stop="71375"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72876" g_stop="72683" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="194" r_length="194" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72682" i_stop="72085" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72084" g_stop="71675" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="604" r_length="410" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E262765" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E262765" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72876" e_stop="72683"/>
          <exon e_start="72084" e_stop="71675"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCT-AATTTTGGTTTTGAT</genome_strand>
        <mrna_strand>GCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGGTGCAGAAGAGAA-TACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAAATTTTGGTTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E256298" ref_strand="+" ref_description="SGN-E256298 [cLEG-37-P16]">
      <seq>gcaagttgttgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcagaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgctgctagcacgcctaatccttataagggagctgaggacttcttaacagaggaagagatacgtatgaaaagtcatgagatgctcgaaaatgaagacatgcaacatttgctacgtatgttcagcatgggacagggtcatgcgtcttctagtgttgcagaagagaattaccagtatggatcagcatacatgcccagcatgtcttctaattttggttttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="73176" stop="71375"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72876" g_stop="72683" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="194" r_length="194" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72682" i_stop="72085" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72084" g_stop="71675" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="604" r_length="410" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E256298" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E256298" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72876" e_stop="72683"/>
          <exon e_start="72084" e_stop="71675"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGAT</genome_strand>
        <mrna_strand>GCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E252060" ref_strand="+" ref_description="SGN-E252060 [cLEG-8-N15]">
      <seq>tatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctctgttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcatgactgaacatgggagggtataatgatagcctcagcggcagatacactatgcagcctcggaacatgaatctaaatggcaacatgcagttaaatggtgcttcgcttcctcagaaccatttgctcggcacgtcacaacaagctcagacgcatgggagtgatatcatgctggcccttcgcccacccccaacagccatgaatgtctagctattttgctgctagcacgcctaatccttataagggagctgaggacttcttaacagaggaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="73163" stop="71581"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72863" g_stop="72683" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72682" i_stop="72085" i_length="598">
            <donor d_prob="0.968" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72084" g_stop="71839" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="431" r_length="250" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E252060" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E252060" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72863" e_stop="72683"/>
          <exon e_start="72084" e_stop="71839"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCA---CCA-CAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAG</genome_strand>
        <mrna_strand>TATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTGTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCATGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGCGGCAGATACACTATGCAGCCTCGGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGCTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGACGCATGGGAGTGATATCATGCTGGCCCTTCGCCCACCCCCAACAGCCATGAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E305959" ref_strand="+" ref_description="SGN-E305959 [cLEY-17-I4]">
      <seq>tgagagactcgcagaggctccgaaatgtcctgggaagtggaatgtcaaataaaatgtgggatgctcttctggaccatgcaaaaacctgtgtactaagtgggaagctatatgtctactatcctgatgatatgagaaatgtcggtgttgtttttaataatatctatgaattatgtggtttaatctctggcggacagtatcattcaatggattctctttcagacaatcagaagatatatgtggatactttagttaagaaggcgtatgacaactggatgcaagttgttgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcagaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="74352" stop="71588"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74052" g_stop="74027" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="26" r_length="26" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74026" i_stop="73932" i_length="95">
            <donor d_prob="0.854" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73931" g_stop="73728" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="230" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73727" i_stop="72921" i_length="807">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72920" g_stop="72683" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="468" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="72682" i_stop="72085" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="72084" g_stop="71888" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="665" r_length="197" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E305959" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E305959" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74052" e_stop="74027"/>
          <exon e_start="73931" e_stop="73728"/>
          <exon e_start="72920" e_stop="72683"/>
          <exon e_start="72084" e_stop="71888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGAGACTCGCAGAGGCTCCGAAATGTAAAATTTCAAACTTGACATGTTGGAGAAAAAGAACTATAATTGTTAGTTGTAACTATATGATTAGTTTTTTGTTAATCATCTTGTTATCTCAGGTCCTGGGAAGTGGAATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAGGTTTGTAATCTGTAATTATTTTCTCTCTTTTGTATAATTTGGTATTGTGGATTCATCTAGACATGCTTAAGGGAAAATGAAGAAGGAAGACATGGGGGCTATGGTTTCCCATGCTTACCCAACCATCTTTTACAATGGATTACCAAGAGCTTTTTTTTCTCCTATCTGTGGCGTTTTGTGAAGTGACTACTCTTCAAGAAGCAAAACACATTCATTTTCATGTTTGTCTCCTCCCAGATCACATCTAGAAGAGATTTACTAACAAAAGTCCCTCAGAACAAACTTTCCTGCTTGCTACAGTTCGAAAAAACTTTTTCTTAGAAATTTAGCTGTTTGTAACTTAGAGATATATCTGCCAAGTTCTTATGGGATATTATCCAGAAATTAGTTGCTGAAGCAATGAAATGCCTTTGATTTAGCTTCTCTGTTCTTTTTCTACCTTTTACAGGCAATAGTTAGAAGGATACAAACTGCTGATTCTGTAAAAATTGATTACAATGAAATTTCCGAAGGCAATGTTGTACCCTTCGAGTTGCTTTGTATATATAGAATATTCAACCCTTTTGACCATATCCAAACAATATTTACAACTAATTTTATTTGATACTGCTAGAATTGCCACACTAGTTAGATGCGGTTTGCACTTTCTCCTTTGTCCCTGTGACATTTCGATACTTCACATAATAGTGGTCAATGGAGTTGTGAGAGTTGCTATCATTTGCATAAATCGACCTTTTTTGGATGATAGTTCTTTTTTTCCCGAGTTTATGATGAAGTTATTAAGCAAACATCAAACAAAATTTGCAGATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCT</genome_strand>
        <mrna_strand>TGAGAGACTCGCAGAGGCTCCGAAAT...............................................................................................GTCCTGGGAAGTGGAATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E250899" ref_strand="+" ref_description="SGN-E250899 [cLEG-13-A2]">
      <seq>gtgcaaaaacctgtgtactaagtgggaagctatatgtctactatcctgatgatatgagaaatgtcggtgttgtttttaataatatctatgaattatgtggtttaatctctggcggacagtatcattcaatggattctctttcagacaatcagaagatatatgtggatactttagttaagaaggcgtatgacaactggatgcaagttgttgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcagaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="74181" stop="71592"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73882" g_stop="73728" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73727" i_stop="72921" i_length="807">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72920" g_stop="72683" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="393" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72682" i_stop="72085" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72084" g_stop="71892" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="586" r_length="193" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E250899" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250899" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73882" e_stop="73728"/>
          <exon e_start="72920" e_stop="72683"/>
          <exon e_start="72084" e_stop="71892"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAGGTTTGTAATCTGTAATTATTTTCTCTCTTTTGTATAATTTGGTATTGTGGATTCATCTAGACATGCTTAAGGGAAAATGAAGAAGGAAGACATGGGGGCTATGGTTTCCCATGCTTACCCAACCATCTTTTACAATGGATTACCAAGAGCTTTTTTTTCTCCTATCTGTGGCGTTTTGTGAAGTGACTACTCTTCAAGAAGCAAAACACATTCATTTTCATGTTTGTCTCCTCCCAGATCACATCTAGAAGAGATTTACTAACAAAAGTCCCTCAGAACAAACTTTCCTGCTTGCTACAGTTCGAAAAAACTTTTTCTTAGAAATTTAGCTGTTTGTAACTTAGAGATATATCTGCCAAGTTCTTATGGGATATTATCCAGAAATTAGTTGCTGAAGCAATGAAATGCCTTTGATTTAGCTTCTCTGTTCTTTTTCTACCTTTTACAGGCAATAGTTAGAAGGATACAAACTGCTGATTCTGTAAAAATTGATTACAATGAAATTTCCGAAGGCAATGTTGTACCCTTCGAGTTGCTTTGTATATATAGAATATTCAACCCTTTTGACCATATCCAAACAATATTTACAACTAATTTTATTTGATACTGCTAGAATTGCCACACTAGTTAGATGCGGTTTGCACTTTCTCCTTTGTCCCTGTGACATTTCGATACTTCACATAATAGTGGTCAATGGAGTTGTGAGAGTTGCTATCATTTGCATAAATCGACCTTTTTTGGATGATAGTTCTTTTTTTCCCGAGTTTATGATGAAGTTATTAAGCAAACATCAAACAAAATTTGCAGATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGC</genome_strand>
        <mrna_strand>GTGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E278739" ref_strand="+" ref_description="SGN-E278739 [cLER-2-A22]">
      <seq>cgaaatgtcctgggaagtggaatgtcaaataaaatgtgggatgctcttctggaccatgcaaaaacctgtgtactaagtgggaagctatatgtctactatcctgatgatatgagaaatgtcggtgttgtttttaataatatctatgaattatgtggtttaatctctggcggacagtatcattcaatggattctctttcagacaatcagaagatatatgtggatactttagttaagaaggcgtatgacaactggatgcaagttgatgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgattcctcagaaccatttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="74233" stop="71680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74032" g_stop="74027" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="6" r_length="6" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74026" i_stop="73932" i_length="95">
            <donor d_prob="0.854" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73931" g_stop="73728" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="210" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73727" i_stop="72921" i_length="807">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72920" g_stop="72683" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="448" r_length="238" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="72682" i_stop="72085" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="72084" g_stop="71980" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="553" r_length="105" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E278739" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E278739" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74032" e_stop="74027"/>
          <exon e_start="73931" e_stop="73728"/>
          <exon e_start="72920" e_stop="72683"/>
          <exon e_start="72084" e_stop="71980"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAATGTAAAATTTCAAACTTGACATGTTGGAGAAAAAGAACTATAATTGTTAGTTGTAACTATATGATTAGTTTTTTGTTAATCATCTTGTTATCTCAGGTCCTGGGAAGTGGAATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAGGTTTGTAATCTGTAATTATTTTCTCTCTTTTGTATAATTTGGTATTGTGGATTCATCTAGACATGCTTAAGGGAAAATGAAGAAGGAAGACATGGGGGCTATGGTTTCCCATGCTTACCCAACCATCTTTTACAATGGATTACCAAGAGCTTTTTTTTCTCCTATCTGTGGCGTTTTGTGAAGTGACTACTCTTCAAGAAGCAAAACACATTCATTTTCATGTTTGTCTCCTCCCAGATCACATCTAGAAGAGATTTACTAACAAAAGTCCCTCAGAACAAACTTTCCTGCTTGCTACAGTTCGAAAAAACTTTTTCTTAGAAATTTAGCTGTTTGTAACTTAGAGATATATCTGCCAAGTTCTTATGGGATATTATCCAGAAATTAGTTGCTGAAGCAATGAAATGCCTTTGATTTAGCTTCTCTGTTCTTTTTCTACCTTTTACAGGCAATAGTTAGAAGGATACAAACTGCTGATTCTGTAAAAATTGATTACAATGAAATTTCCGAAGGCAATGTTGTACCCTTCGAGTTGCTTTGTATATATAGAATATTCAACCCTTTTGACCATATCCAAACAATATTTACAACTAATTTTATTTGATACTGCTAGAATTGCCACACTAGTTAGATGCGGTTTGCACTTTCTCCTTTGTCCCTGTGACATTTCGATACTTCACATAATAGTGGTCAATGGAGTTGTGAGAGTTGCTATCATTTGCATAAATCGACCTTTTTTGGATGATAGTTCTTTTTTTCCCGAGTTTATGATGAAGTTATTAAGCAAACATCAAACAAAATTTGCAGATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGC</genome_strand>
        <mrna_strand>CGAAAT...............................................................................................GTCCTGGGAAGTGGAATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGATGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGATTCCTCAGAACCATTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E255169" ref_strand="+" ref_description="SGN-E255169 [cLEG-31-A22]">
      <seq>atgcaaaaacctgtgtactaagtgggaagctatatgtctactatcctgatgatatgagaaatgtcggtgttgattttaataatatctatgaattatgtggtttaatctctggcggacagtatcattcaatggattctctttcagacaatcagaagatatatgtggatactttagttaagaaggcgtatgacaactggatgcaagttgttgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="74182" stop="71731"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73882" g_stop="73728" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73727" i_stop="72921" i_length="807">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72920" g_stop="72683" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="393" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72682" i_stop="72085" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72084" g_stop="72031" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="447" r_length="54" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E255169" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E255169" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73882" e_stop="73728"/>
          <exon e_start="72920" e_stop="72683"/>
          <exon e_start="72084" e_stop="72031"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAGGTTTGTAATCTGTAATTATTTTCTCTCTTTTGTATAATTTGGTATTGTGGATTCATCTAGACATGCTTAAGGGAAAATGAAGAAGGAAGACATGGGGGCTATGGTTTCCCATGCTTACCCAACCATCTTTTACAATGGATTACCAAGAGCTTTTTTTTCTCCTATCTGTGGCGTTTTGTGAAGTGACTACTCTTCAAGAAGCAAAACACATTCATTTTCATGTTTGTCTCCTCCCAGATCACATCTAGAAGAGATTTACTAACAAAAGTCCCTCAGAACAAACTTTCCTGCTTGCTACAGTTCGAAAAAACTTTTTCTTAGAAATTTAGCTGTTTGTAACTTAGAGATATATCTGCCAAGTTCTTATGGGATATTATCCAGAAATTAGTTGCTGAAGCAATGAAATGCCTTTGATTTAGCTTCTCTGTTCTTTTTCTACCTTTTACAGGCAATAGTTAGAAGGATACAAACTGCTGATTCTGTAAAAATTGATTACAATGAAATTTCCGAAGGCAATGTTGTACCCTTCGAGTTGCTTTGTATATATAGAATATTCAACCCTTTTGACCATATCCAAACAATATTTACAACTAATTTTATTTGATACTGCTAGAATTGCCACACTAGTTAGATGCGGTTTGCACTTTCTCCTTTGTCCCTGTGACATTTCGATACTTCACATAATAGTGGTCAATGGAGTTGTGAGAGTTGCTATCATTTGCATAAATCGACCTTTTTTGGATGATAGTTCTTTTTTTCCCGAGTTTATGATGAAGTTATTAAGCAAACATCAAACAAAATTTGCAGATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATC</genome_strand>
        <mrna_strand>ATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGATTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E332029" ref_strand="+" ref_description="SGN-E332029 [cTOD-16-H20]">
      <seq>aagaattgaaggacctgatgggagaaatttgcagcttcagtttcggtccaaactgtcactacctctcttcactggaggaaaagtagaaggagagcagggttccgcaatacatattgtcttgattgatggaaatacaaaccatgttgtaacatcaggtcccgagtccttggttaagttagatgttgttgtgcttgaaggagattttaacaatgaggatgatgatggctggactcaagaagaatttgagtctcatatcgtcaaggagcgtgaaggcaagaggcctctccttactggagaattgcaagtgatattgaaggaaggtgttggcacccttggcgagttgacatttactgacaactccagctggatcagaagcagaaagttcaggctaggcttaaaggtggcatcaggttgctgtgagggaatccgcattcgtgaggcaaaaacagatgccttcactgtcaaggatcatagaggagaattgtacaagaaacattatccacctgcattagatgatgaagtttggagattggaaaagatagggaaagatggatccttccacaagaggctaaatacagctggcatacataaagtggaagactttctgcgtcttgttgtgagagactcgcagaggctccgaaatgtcctgngaagtggaaatgtcaataaaatgtgggatgctcttctggaccatgcaaaaacctgtgtactaagtgggaagctatatgtctactatcctgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="75055" stop="73532"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74755" g_stop="74274" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="482" r_length="482" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74273" i_stop="74188" i_length="86">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74187" g_stop="74027" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="643" r_length="161" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74026" i_stop="73932" i_length="95">
            <donor d_prob="0.854" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73931" g_stop="73832" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="644" r_stop="743" r_length="100" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E332029" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>743</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332029" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74755" e_stop="74274"/>
          <exon e_start="74187" e_stop="74027"/>
          <exon e_start="73931" e_stop="73832"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCCAGCTGGATCAGAAGCAGAAAGTTCAGGCTAGGCTTAAAGGTGGCATCAGGTTGCTGTGAGGGAATCCGCATTCGTGAGGCAAAAACAGATGCCTTCACTGTCAAGGATCATAGAGGAGAATGTAAGCCCATATAATGTGTCTTTTGTATAGAAATGACAATTATGTTTGTTGAGGTTTGTAGTAACTCCAATCTTGTTTCCTTGCAGTGTACAAGAAACATTATCCACCTGCATTAGATGATGAAGTTTGGAGATTGGAAAAGATAGGGAAAGATGGATCCTTCCACAAGAGGCTAAATAAAGCTGGCATACATAAAGTGGAAGACTTTCTGCGTCTTGTTGTGAGAGACTCGCAGAGGCTCCGAAATGTAAAATTTCAAACTTGACATGTTGGAGAAAAAGAACTATAATTGTTAGTTGTAACTATATGATTAGTTTTTTGTTAATCATCTTGTTATCTCAGGTCCTGGGAAGTGG-AATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATG</genome_strand>
        <mrna_strand>AAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCCAGCTGGATCAGAAGCAGAAAGTTCAGGCTAGGCTTAAAGGTGGCATCAGGTTGCTGTGAGGGAATCCGCATTCGTGAGGCAAAAACAGATGCCTTCACTGTCAAGGATCATAGAGGAGAAT......................................................................................TGTACAAGAAACATTATCCACCTGCATTAGATGATGAAGTTTGGAGATTGGAAAAGATAGGGAAAGATGGATCCTTCCACAAGAGGCTAAATACAGCTGGCATACATAAAGTGGAAGACTTTCTGCGTCTTGTTGTGAGAGACTCGCAGAGGCTCCGAAAT...............................................................................................GTCCTGNGAAGTGGAAATGTC-AATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E279167" ref_strand="-" ref_description="SGN-E279167 [cLEL-4-P21](-)">
      <seq>gcacgagctttggctaaacttggacctgctaaacttaatgcaagggtttcgccaaaaagaattgaaggacctgatgcgagaaatttgcagcttcagtttcggtccaaactgtcactacctctcttcactggaggaaaagtagaaggagagcagggttccgcaatacatattgtcttgattgatggaaatacaaaccatgttgtaacatcaggtcccgagtccttggttaagttagatgttgttgtgcttgaaggagattttaacaatgaggatgatgatggctggactcaagaagaatttgagtctcatatcgtcaaggagcgtgaaggcaagaggcctctccttactggagaattgcaagtgatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="75992" stop="74144"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75691" g_stop="75648" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75647" i_stop="74768" i_length="880">
            <donor d_prob="0.951" d_score="0.93"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74767" g_stop="74444" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="368" r_length="324" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E279167" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>368</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E279167" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="75691" e_stop="75648"/>
          <exon e_start="74767" e_stop="74444"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAGGTATGGTTTCACATATCATCACTCAAACCTTTCAGAGCACAAATCTGATTCCCATATTTTGTCAGGATATTTGCATGTATGGGAAATATCCCATCACTCATCAGAGTCATTTGGTATATCCAATTGTGAACTGGTCAATGTTTAACTGAATTAGAGTGGGATATGAATTGTAGATGTTGGAAACACTTGAGGGGAGGTTTCCCTGGTCTTGTGCAATTATATATTTAGATTTAGGTAAGGTCAATATTTGTTACAGCAGTCAATCCCTATGATTAATGGGAGTGTGGGAGGGTTTGAGCACTTGCTGCAGCCAGAGTCAAAGGTAGATTAGTGAAACTAGTTACAGATGCAGGAAGTCAATTTAGGAAAGAACTAAATCTTAATAATGCTTTTAGAGTTTTGAAAAAGAGTTTTGCTAACATGAACCACAGACTACTAAAACCATTTACATGGACATGGTCCTATGTGTCTATCAGATTGTAATTGACTATTTATTTTGTTTGATATGCTTCTTATTATATAAGTTCCATGGTATTAAACCTTCTCACAGGGAATATCCTTCTGCTTCAGCGGTTTGTATGAGTCATTCTGACTTCTAGTTCATTTCAGTGCTAGAGCAGATTGATTTTCCCAATACTATGTGTGAAATGTGAAAAGACTTTTAGCAAGTCTCCTTCCCATTGGATACTGATCAAAGAATTGACCTAATATGCCAAACATTAGCATGACTATGAAGTGCAGTGTGAGGATGTGACCCCTAATTCAATTTTGCATCAAAGATCAATCTATGCCTATGCTTGCTTGAGCTGTTCATGTACTCCATTTTCTATAATTGAATGTTCACCCTGTTCCGGGATTGAATTTTGTGATAATTATGCAGGGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATT</genome_strand>
        <mrna_strand>GCACGAGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCGCCAAAAAGAATTGAAGGACCTGATGCGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E331683" ref_strand="+" ref_description="SGN-E331683 [cTOD-7-B17]">
      <seq>atcttctttcttctttcaatttttttcccgctttccccttgtgtcgctcctttttctcactttcttctatccactgagaaaaaaagaagaaaattttgagtctcactatacgaaacagactgttgaataatcaaacaaagaaaaaagaaagaaactttagatcagatctgaaaatttgaacaagaggagtgttttaatagtcaaagaaaatgcagacaaggtatatggagaaacgtgttttggatccaagtagtagtgaggaaggtcaacctgataggaaaagacctgctcttgcaagtgtcattgttgaagcgctaaaggtggacagtctgcaaaaactctgctcatcactggagccaattcttcgaagagttgttagtgaagaagtggagcgtgctttggctaaacttggacctgctaaacttaatgcaagggtttcgccaaaaagaattgaaggacctgatgggagaaatttgcagcttcagtttccgtccaaactgtcactacctctcttcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="78348" stop="74383"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78048" g_stop="77751" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="298" r_length="298" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77750" i_stop="76628" i_length="1123">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76627" g_stop="76552" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="374" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76551" i_stop="75707" i_length="845">
            <donor d_prob="0.710" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75706" g_stop="75648" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="433" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75647" i_stop="74768" i_length="880">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74767" g_stop="74683" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="518" r_length="85" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E331683" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331683" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78048" e_stop="77751"/>
          <exon e_start="76627" e_stop="76552"/>
          <exon e_start="75706" e_stop="75648"/>
          <exon e_start="74767" e_stop="74683"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTCTTTCTTCTTTCAATTTTTTTCCCGCTTTCCCCTTTTTTCGCTCCTTTTTCTCACTTTCTTCTATCCACTGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAGGTAATTTGATTTTTAAAAAAATGTTTTTTTTTTAGACTTTTTGTTGAGGGGTATTTTTTCTTTTGGTCTTGTTTTATGTATTATAGCAAATTTTAGTACTGAACAATGCAGTTGGTTTGTTTGAATGATTGGTTATTATGAAAGGTTTTGCTGGGAATATTTGTTGGTTTGAAGAAATTGTAGAGTTTGGGTATTGCAAAAATTATTGTGGAAAGGGGAGAATGGTGATTCTGTTTTGTTGGGGTGGTGGTGAATTAAAATTTTTAGTAAGAAAAATGTGATCTTGATGAATTATGTGTGACGAATGAGGTATTATTATCAAGATCCTTGGAGAGAAGAGAGTGGGAAGCTTTATTGTCTGGTTGTTTGGTGTTGACTGCAAGTGAAGGAAGTTTTTTGATTGAATCTGGCTTGATAACTAGCTTGCTCTTTGTTTTGGTTTATGAGAGAAAAATGAGTATTTTGCTTTGTCATAACTACAAACAATCTACTATTTGATCAGCTGTGGCACTGAAAGAAGAGATTTATAGTGGTTAATTCATGATTCCTTTTTAAGATTTGTGTCATTCGAGGAGGTGATTTGAAGGATTTTGATCATGTTGCAAATAACTTACAATGAATAACATTACATGACTGCCCCTGTCACAGCCCCACAGGACAGAAAGTGGTCCACTAGATCAACTTTTAAATGGGATCTTCACTGTTGGTTGCCAATAAGATTATCCACATTTCATATTCTCAATCATCATTCAGAGGGGAAGTTGTCTCGGTATCCTGCCGGGGACATACTTGAGATTTCTAAGGGAAGTCATTACCAGGTGTTTGTAATCCTGCAAACACTTGTAGCTTTCTCTGAGTGTCTAAGTGATAGATTGATGGTCCACTCTACCCTTTTCTTTTTCTCTTAGCAAGTGATCAGAAAAAAGCTTTTCATTTTAGAGGTTTTTATTTCTGTTGATTGTTTGTTGTGGTATCATCTGACCTGACATCATGTGACCTGGATGTCTTATATTTTCTTAGAGAAGCTGAAATTCAGTGCCCTGTTATAGCTTTACTCATCTTTCTGTGCACTGTTCATGTTAACTGTTGCACACCCTTATTGAAAAGTACATGGTTACTGCAGTGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTTGTAAGATTATTAGGCCCCCTTTAGAACTCTCATCCTATTCATTGGGCATTACTTATGTGAAATTTCATTTAACCAACCAACCACTCCATGGTAACTTGTGAAAGTTTGGTTTTCAATTACATAACTACTGTGGCATGATACATATTTCCAGAAGACTCAGCATGACAGATATTTTACTTCTGAAGGAATACAATGAAATAATCGTAACTGCAAGCTTTGTGACTATACAGGCCAAGTAAAGCCACTGCCAGATATTTGAAATGGATATGTCATTGTTTTGTGTAAAACCATTTATTTCATATGCTGAAATATTTTTTCAAACTATTTGTGCTTTGATCATTGTAGCAGTTACACTGAGAAACCCCTCCCCCCTCCCTCTCTCTCACCAGCGAGAGCTGTCTCCATATCCTGCTTATATGCATAGTTTCTGGAGATAAGTAGCTTTAAATTTTCCTGTCAAGAGCTTACTGAGTGCAGAAATTTACTTCTGTCTTTATTTTTGATGTGAACAACATATTTTAAGCATGTCTGCGCTCCAGGTGACCTTTTAGCAGTTCTTCTCTTGGACTCAAAATGTATTTGAGTTGGTAGTAAAAAGACTTTTGCGTGTTACCATGGCTTTATTCAACTTTTAGCTGTAAGAGCTAAGATATTAATGTCTTATGTACATTTACTTGAAACATTTGGATTCGATGGGCTTGTCACCAGCCCATCGAATGCTAATATTTTATGTGATTGGGATGACTAGACTATGCAAACATGTCCATTCGTGTTTTATTTGTACAAGGTTTCTTCTATAGTGGCTTTTGTTTACTTATTTATGAATGTCCATTTTTGTTTACCAGGTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAGGTATGGTTTCACATATCATCACTCAAACCTTTCAGAGCACAAATCTGATTCCCATATTTTGTCAGGATATTTGCATGTATGGGAAATATCCCATCACTCATCAGAGTCATTTGGTATATCCAATTGTGAACTGGTCAATGTTTAACTGAATTAGAGTGGGATATGAATTGTAGATGTTGGAAACACTTGAGGGGAGGTTTCCCTGGTCTTGTGCAATTATATATTTAGATTTAGGTAAGGTCAATATTTGTTACAGCAGTCAATCCCTATGATTAATGGGAGTGTGGGAGGGTTTGAGCACTTGCTGCAGCCAGAGTCAAAGGTAGATTAGTGAAACTAGTTACAGATGCAGGAAGTCAATTTAGGAAAGAACTAAATCTTAATAATGCTTTTAGAGTTTTGAAAAAGAGTTTTGCTAACATGAACCACAGACTACTAAAACCATTTACATGGACATGGTCCTATGTGTCTATCAGATTGTAATTGACTATTTATTTTGTTTGATATGCTTCTTATTATATAAGTTCCATGGTATTAAACCTTCTCACAGGGAATATCCTTCTGCTTCAGCGGTTTGTATGAGTCATTCTGACTTCTAGTTCATTTCAGTGCTAGAGCAGATTGATTTTCCCAATACTATGTGTGAAATGTGAAAAGACTTTTAGCAAGTCTCCTTCCCATTGGATACTGATCAAAGAATTGACCTAATATGCCAAACATTAGCATGACTATGAAGTGCAGTGTGAGGATGTGACCCCTAATTCAATTTTGCATCAAAGATCAATCTATGCCTATGCTTGCTTGAGCTGTTCATGTACTCCATTTTCTATAATTGAATGTTCACCCTGTTCCGGGATTGAATTTTGTGATAATTATGCAGGGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACT</genome_strand>
        <mrna_strand>ATCTTCTTTCTTCTTTCAATTTTTTTCCCGCTTTCCCCTTGTGTCGCTCCTTTTTCTCACTTTCTTCTATCCACTGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCCGTCCAAACTGTCACTACCTCTCTTCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E344187" ref_strand="+" ref_description="SGN-E344187 [cTOF-16-H9]">
      <seq>tatggaggaagccgatctgcacccaaagtatttagtgacgatgtaaagcccctgctagaggatgcaaatattcactatacactgcaagaaactaaatatcggttacatgcaaaggaagttgctcattcgttggatcttttgcgatatgatggagttctttgtgtcagtggtgatggaattttggttgaggtagtgaatggactgcttgaaagggaggattggagtactgcaataaagatgcctcttggagtaatacccgcaggaacttcaaatgggatggccaagtctcttctagattctgttggtgaatcttgtactgcatttaatgcaactcttgctataatcagaggccacaagagatcactagatgtagctacagttttacaggggcagaaaaaatatttcagtgtgctgatgcttgcctggggtcttatagctgatatagatatagagtctgagaagtataggtggatgggtagtgctcgaatggatttttatgcaatacagcggatattttgtcttagaaagtatcatggctgtatcaaatttgtggctgcaccagggtttgaaaattttggagaaccaaatgaacttggaggtgaaattgatgagcttaactcgaaatttgttatgcaagatggctattgtggtcccacttttgacatgaaggttttcaaccgcaagaattgagggccttttgtctcaatctggcttcataatgtaccttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="82690" stop="86169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82990" g_stop="83077" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83078" i_stop="83173" i_length="96">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.707" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83174" g_stop="83274" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="189" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83275" i_stop="84134" i_length="860">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84135" g_stop="84207" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="262" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84208" i_stop="84633" i_length="426">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="84634" g_stop="84720" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="349" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="84721" i_stop="84833" i_length="113">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="84834" g_stop="84911" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="427" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="84912" i_stop="85041" i_length="130">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="85042" g_stop="85112" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="498" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="85113" i_stop="85636" i_length="524">
            <donor d_prob="0.810" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="85637" g_stop="85869" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="730" r_length="232" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E344187" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344187" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82990" e_stop="83077"/>
          <exon e_start="83174" e_stop="83274"/>
          <exon e_start="84135" e_stop="84207"/>
          <exon e_start="84634" e_stop="84720"/>
          <exon e_start="84834" e_stop="84911"/>
          <exon e_start="85042" e_stop="85112"/>
          <exon e_start="85637" e_stop="85869"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGGAGGAAGCCGATCTGCACCCAAAGTATTTAGTGACGATGTAAAGCCCCTGCTAGAGGATGCAAATATTCACTATACACTGCAAGGTTTGCAATATTAAATATCTTATTCATGTGTAACAGTTGGTTTTTCAGTGATTCTTTTTGTGTCATTAATCTTGCCTTTTAATCTTCCCCTCTCAGAAACTAAATATCGGTTACATGCAAAGGAAGTTGCTCATTCGTTGGATCTTTTGCGATATGATGGAGTTCTTTGTGTCAGTGGTGATGGAATTTTGGTTGAGGTAAGTTGGCATGTCTATTCTTGTTTTTGATATCTTCTGTATGACCTATTGTTGTTTGCCTTTCACTTGAACAATTACGCTATAACAACTACTTTTTGTCATATATTTGATCATGGAATACCTAACTTAATTGTTGACTGGCATGTTATGCTTTCCTGATGAAAAACTCAAGATATTTCAGTTTATATATTGTTCTGATTTAAAGATATCAAAGATGAACCTACAGTGGGATAACTGCTATATAAAACTTATTCCTTCACCAGCGGTTTTTCCTGACTTTTACCCAGCTTCACTTCAAACATGAAACTGCTGAAAGGAGTTGCTGAATGCGAAGGAATAAATTTGTAGTATCATGGTTAAATGAAAAACAATTGAAAGATAAACTGATTGTGTTTATTCCAAAACTTTAGAGGGCTTATATGTAGGTATCTTATTCTCGTGCTTCAACTTCTGAAATGCATACAAAAAGAGAAGCACAGAGGCTTATCCCCCCCTCCCCCCCCCCCCCCCCCACAAGGAAAAAAACAGAGTAAGTATATTGCACTGATGTAGTTGAGAACTTGACATTTCTTAGAGGTCAGTCCTGGAACAACTTCAAAGTTGCTCCAGTGATATTGATGGTAGCCACAACATGGGTACAAAATCTCTGTTCTTCACTAATCCTGTATTCTAGAAGGTCTGTTCCCTGAGGGATCTATCTTTAAGATTTTTGGCTTATTATTTATTGTCGTAAATGGATGATAATCAGAGGGTCCGACTCCTCTTGCGCACTTGTGATAAAAGTTTCCTGATCAATAAGAGAAATGGATGATAACCAACCAGTGATCCTCTTACTTTCATGTTTTTACAATTTTTAGTAGGTAGTGAATGGACTGCTTGAAAGGGAGGATTGGAGTACTGCAATAAAGATGCCTCTTGGAGTAATACCCGCAGGTATATTTTCTTCTCTTGCTGGTGCTTGCCTTTAGTAAACACTAAGCGGGTCTGTATATTTTGCTTAGCTTTTATTGTGGAGCTTGATATACATTATTTTGGTTTTGTCACATTAAGCTTTTAATCACATTGTTATACCTATATAGTATGTTAAACCACCAGATAAGCACTTCCATCTAATTTCTAAAAGGTGGTCAAGGGAACGAGGTGGTGAAACACATGTAACTTGACACAACTTTCAGAAATTAGACTGAAATGCTGATCTGGTTTCTTATATACATTATACATAGTTTGATCTGTAACTTCTTATACAGTATAATGTACATATTTTGGTTTGTAACTTCTTACAAACATTTTTGCACATGGAAGCTATTATTTACTTTCTTCTACTGTTCTATAATTGCATTTTTGTGTATGCTAATGCAGGAACTTCAAATGGGATGGCCAAGTCTCTTCTAGATTCTGTTGGTGAATCTTGTACTGCATTTAATGCAACTCTTGCTATAATCAGAGGTAAATATCCTTTTAACAAAAATGTGTATTCCTGAACTGGAGTTTTAATTGAATTACTATTCTTGTTGAATGAAAGAAGACTTTTATATCTATGCATGTTTGGTCTATGGCAGGCCACAAGAGATCACTAGATGTAGCTACAGTTTTACAGGGGCAGAAAAAATATTTCAGTGTGCTGATGCTTGCCTGGGGTATGTATATCTGACATTGTCTCTGGTGGTTTTGATACCTTTTTTGTTTCATTTAATGCAATGTGATGCACTTATTGTTGCAAATTGAAATATCATACTAAACTATCTGACAGGATTCGTTGTTTTTCAGGTCTTATAGCTGATATAGATATAGAGTCTGAGAAGTATAGGTGGATGGGTAGTGCTCGAATGGATTTTTATGTATGTTCTAAATCTATTTCCTCTAATATATATTTTTCTTAGATTTCAGTATCAGAACTTACACCCTTTGTGTAGTTTGTTATGAATATACAAATATGTTACCTGTTTCAAAAAAACGCTGTACCTCCATATTTCCTCACTGGATTTATTTACAAATTTTCTGCTTGCTGTAGAACTTCATTCCTTGATCTCTCTCTCTCTCTCTCCCTCCTCTCTTTTTGCACCTTGCTCCTTCTCGTTTTTTGGAAGGTTTGGTCTCATTACAATATTCGAGATTCACTGACCCAGAAATTTGCCAGTATTTTGTGTACCTGAACCGTTCTTCATGGACAATAGTTCCACCCCCCTTCCATCCTATCTTTTTCCAGGAGAAAAAAAAAATGAAAGAAAGAAAAAGACAAAGTTGAATGTCTCTTCAGTTGATTGCATGATTCATGGTTCTAAGATACAGAGGGAATCTAATATATGGCTATTGAAGCATCATGGCTTGCTTTTTAATTGCTAGTCTTTTGTTATTGGTCCAGGCAATACAGCGGATATTTTGTCTTAGAAAGTATCATGGCTGTATCAAATTTGTGGCTGCACCAGGGTTTTGAAAATTTTGGAGAACCAAATGAACTTGGAGGTGAAATTGATGAGCTTAACTCGAATTTGGTTATGCAAGATGGCTATTGTGGTCCCACTTTTGACATGAAGGGTTTCAACCGCAAGATTGAGGGGCCTTTTGTCTCAATCTGGCTTCATAATGTACCTTGGG</genome_strand>
        <mrna_strand>TATGGAGGAAGCCGATCTGCACCCAAAGTATTTAGTGACGATGTAAAGCCCCTGCTAGAGGATGCAAATATTCACTATACACTGCAAG................................................................................................AAACTAAATATCGGTTACATGCAAAGGAAGTTGCTCATTCGTTGGATCTTTTGCGATATGATGGAGTTCTTTGTGTCAGTGGTGATGGAATTTTGGTTGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGTGAATGGACTGCTTGAAAGGGAGGATTGGAGTACTGCAATAAAGATGCCTCTTGGAGTAATACCCGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTCAAATGGGATGGCCAAGTCTCTTCTAGATTCTGTTGGTGAATCTTGTACTGCATTTAATGCAACTCTTGCTATAATCAGAG.................................................................................................................GCCACAAGAGATCACTAGATGTAGCTACAGTTTTACAGGGGCAGAAAAAATATTTCAGTGTGCTGATGCTTGCCTGGG..................................................................................................................................GTCTTATAGCTGATATAGATATAGAGTCTGAGAAGTATAGGTGGATGGGTAGTGCTCGAATGGATTTTTAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATACAGCGGATATTTTGTCTTAGAAAGTATCATGGCTGTATCAAATTTGTGGCTGCACCAGGG-TTTGAAAATTTTGGAGAACCAAATGAACTTGGAGGTGAAATTGATGAGCTTAACTCGAAATTTGTTATGCAAGATGGCTATTGTGGTCCCACTTTTGACATGAAGGTTTTCAACCGCAAGAATTGAGGGCCTTTTGTCTCAATCTGGCTTCATAATGTACCTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E314839" ref_strand="+" ref_description="SGN-E314839 [cTOA-20-H16]">
      <seq>gaaaagttcctgacaatgttgaccttccatcgagatggacttgttcagacaactcatgcgaccccgagaggtctgtgtgctcagcagttcaagaattaacagcagatcatctgagggacctactacctcatattaataaagcttccaagaaaaggaaggcttctaaacaggaaatggacttggttgaaactctggatgggcttgatgcccttgctcatctagctatcctagaagagggagagacccttccagcatcaccacaggccacaactaagcatccacgtcatagacctgggtgtacatgcattgtctgcatccagccccctagtggaaaaggtcctaagcacaagcaatcatgtgattgtaacgtctgtaaatcagtaaagcgtcgtttcaaaacattgatgatgaagcgtgaaaaaaagttatcagagaaagaagcagaagctacttgtcaaaagctgcagccgcaatcagctgggcaattgcttgatgctgatgacattcaagaacctattgatgatgcagtgcattcaagccctcagcatgaagagctgaacattgaaggttctgttgatcccaattaccttaatgagaagaaatcttctgttgaggatcccaattaccttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="100248" stop="102475"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100548" g_stop="100617" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100618" i_stop="101485" i_length="868">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101486" g_stop="101556" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="141" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101557" i_stop="101683" i_length="127">
            <donor d_prob="0.918" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101684" g_stop="102175" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="633" r_length="492" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E314839" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314839" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100548" e_stop="100617"/>
          <exon e_start="101486" e_stop="101556"/>
          <exon e_start="101684" e_stop="102175"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGTTCCTGACAATGTTGACCTTCCATCGAGATGGACTTGTTCAGACAACTCATGCGACCCCGAGAGGTATGATGGAAATTCTTTAACCTACCTAAGATGCAGTTAAAATGTCAATAGAATACATGAAGGAAAGCGCACATGCTTTTGTTAGTGTAAATGCTGAAGTGGATTGCATTAAGCAATCTGGACAAGCCAAAACCTCTAACTTCAATAATCAAGCTTGTCAGTGGAAGAAAAGGTTGTACTGGTGAATTACTCCTCATGAAATGTGCTTCATAGGTAGGAGTAAGGTCTGCAACATTCTACTCTCCCCAGTCCTACTTGTGGGATTACACCGGAGATGTGGTTGTTGTTGTTGAAATGTGCTTCTGATATTAGATATTGAAAATCATTTTAAAAATTGTCCTGCAGACACAAATTTATCCTTTTTCTTTCCAAAGTCTAACTGAACCTTGCTATTTGGAATTGGCAACCTGATGAGGTTTTCTATGGTTGGTTTCTCCCCTTTTCTTTTAGCAGTTTGTCCCTTTAATCAACTCTGTAGCATTCTTCTTCTCTCTCCAATTTTCTATTCTTTCAGAAAGTTAACTTTGAACCACCTTCATCACCTGTGCCTGCATTATATGAGTTTCCATCATTAGAAAAAAAAAAACTTCGTCAGTTTCCATTTTCTACGATTCTCGTTTTCTTTAAGTTACATCTGGCTGTCTTTTGCTTTAATAGAAATAAACTAACGTCTGTTCATTTCCATCCTGATAAAAAAAAAAGTTTGTCTCCAAAATAGTATTGACAATTCCTGAATGATCTTTATCATAGATAGAAATACACAAAGTTATCAATCTTTTTTTAAAAAAAAGTATTGACAATTCCTGAAATTCAGTCAAGTATTCAATTGCAGTTTGAGTATTTGGGTTATGATCTTTCTTCTTTTTAGGTCTGTGTGCTCAGCAGTTCAAGAATTAACAGCAGATCATCTGAGGGACCTACTACCTCATATTAATAAAGGTAAAAGTGCTTGCTCGTGTAGGTCATAAATTTCTACACTATTGAACCGGTGCTTATGTGTCTGCCTCATCTTGACAATGAATTGCAAGTCCTTCAGGTTTACTGAAGTTATATGATTCTTTTGCAGCTTCCAAGAAAAGGAAGGCTTCTAAACAGGAAATGGACTTGGTTGAAACTCTGGATGGGCTTGATGCCCTTGCTCATCTAGCTATCCTAGAAGAGGGAGAGACCCTTCCAGCATCACCACAGGCCACAACTAAGCATCCACGTCATAGACCTGGGTGTACATGCATTGTCTGCATCCAGCCCCCTAGTGGAAAAGGTCCTAAGCACAAGCAATCATGTGATTGTAACGTCTGTAAATCAGTAAAGCGTCGTTTCAAAACATTGATGATGAAGCGTGAAAAAAAGTTATCAGAGAAAGAAGCAGAAGCTACTTGTCAAAAGCTGCAGCCGCAATCAGCTGGGCAATTGCTTGATGCTGATGACATTCAAGAACCTATTGATGATGCAGTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATG</genome_strand>
        <mrna_strand>GAAAAGTTCCTGACAATGTTGACCTTCCATCGAGATGGACTTGTTCAGACAACTCATGCGACCCCGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTGTGCTCAGCAGTTCAAGAATTAACAGCAGATCATCTGAGGGACCTACTACCTCATATTAATAAAG...............................................................................................................................CTTCCAAGAAAAGGAAGGCTTCTAAACAGGAAATGGACTTGGTTGAAACTCTGGATGGGCTTGATGCCCTTGCTCATCTAGCTATCCTAGAAGAGGGAGAGACCCTTCCAGCATCACCACAGGCCACAACTAAGCATCCACGTCATAGACCTGGGTGTACATGCATTGTCTGCATCCAGCCCCCTAGTGGAAAAGGTCCTAAGCACAAGCAATCATGTGATTGTAACGTCTGTAAATCAGTAAAGCGTCGTTTCAAAACATTGATGATGAAGCGTGAAAAAAAGTTATCAGAGAAAGAAGCAGAAGCTACTTGTCAAAAGCTGCAGCCGCAATCAGCTGGGCAATTGCTTGATGCTGATGACATTCAAGAACCTATTGATGATGCAGTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E698551" ref_strand="+" ref_description="SGN-E698551 [FA06DA03]">
      <seq>cccccttaaaagagggagagacccttccagcatcaccacaggccccaactaagcatccacgtcatagacctgggtgtacatgcattgtctgcatccagccccctagtggaaaaggtcctaagcacaagcaatcatgtgattgtaacgtctgtaaatcagtaaagcgtcgtttcaaaacattgatgatgaagcgtgaaaaaaagttatcagagaaagaagcagaagctacttgtcaaaagctgcagccgcaatcagctgggcaattgcttgatgctgatgacattcaagaacctattgatgatgcagtgcattcaagccctcagcatgaagagctgaacattgaaggttctgttgatcccaattaccttaatgagaagaaatcttctgttgaggatcccaattaccttgatgagaagaaatcttcagttgatgacacaaattaccttagtgagaagatatcttctgttgatgaccccagctaccttaatgagaaggaatcttctgttgatgatcccaacatcctgaatgagaagaaatcttctgttgatgatcctaactgcctgaatgagaagaaatctgctgttgatgatcccaactacgtggatgagaggaaatcttctgttgatgatcccaattgccttaaggagaagaaatcttctgcttcaccatttaaaggtgaatttgacctgaatgctaagccagatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="101469" stop="102770"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101765" g_stop="102470" g_length="706"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="706" r_length="706" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E698551" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E698551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101765" e_stop="102470"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATCCTAGAAGAGGGAGAGACCCTTCCAGCATCACCACAGGCCACAACTAAGCATCCACGTCATAGACCTGGGTGTACATGCATTGTCTGCATCCAGCCCCCTAGTGGAAAAGGTCCTAAGCACAAGCAATCATGTGATTGTAACGTCTGTAAATCAGTAAAGCGTCGTTTCAAAACATTGATGATGAAGCGTGAAAAAAAGTTATCAGAGAAAGAAGCAGAAGCTACTTGTCAAAAGCTGCAGCCGCAATCAGCTGGGCAATTGCTTGATGCTGATGACATTCAAGAACCTATTGATGATGCAGTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATGAGAAGAAATCTTCAGTTGATGACACAAATTACCTTAGTGAGAAGATATCTTCTGTTGATGACCCCAGCTACCTTAATGAGAAGGAATCTTCTGTTGATGATCCCAACATCCTGAATGAGAAGAAATCTTCTGTTGATGATCCTAACTGCCTGAATGAGAAGAAATCTGCTGTTGATGATCCCAACTACGTGGATGAGAGGAAATCTTCTGTTGATGATCCCAATTGCCTTAAGGAGAAGAAATCTTCTGCTTCACCATTTAAAGGTGAATTTGACCTGAATGCTAAGCCAGATAG</genome_strand>
        <mrna_strand>CCCCCTTAAAAGAGGGAGAGACCCTTCCAGCATCACCACAGGCCCCAACTAAGCATCCACGTCATAGACCTGGGTGTACATGCATTGTCTGCATCCAGCCCCCTAGTGGAAAAGGTCCTAAGCACAAGCAATCATGTGATTGTAACGTCTGTAAATCAGTAAAGCGTCGTTTCAAAACATTGATGATGAAGCGTGAAAAAAAGTTATCAGAGAAAGAAGCAGAAGCTACTTGTCAAAAGCTGCAGCCGCAATCAGCTGGGCAATTGCTTGATGCTGATGACATTCAAGAACCTATTGATGATGCAGTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATGAGAAGAAATCTTCAGTTGATGACACAAATTACCTTAGTGAGAAGATATCTTCTGTTGATGACCCCAGCTACCTTAATGAGAAGGAATCTTCTGTTGATGATCCCAACATCCTGAATGAGAAGAAATCTTCTGTTGATGATCCTAACTGCCTGAATGAGAAGAAATCTGCTGTTGATGATCCCAACTACGTGGATGAGAGGAAATCTTCTGTTGATGATCCCAATTGCCTTAAGGAGAAGAAATCTTCTGCTTCACCATTTAAAGGTGAATTTGACCTGAATGCTAAGCCAGATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E555621" ref_strand="+" ref_description="SGN-E555621 [cTSC-6-F6]">
      <seq>gtgcattcaagccctcagcatgaagagctgaacattgaaggttctgttgatcccaattaccttaatgagaagaaatcttctgttgaggatcccaattaccttgatgagaagaaatcttcagttgatgacacaaattaccttagtgagaagatatcttctgttgatgaccccagctaccttaatgagaaggaatcttctgttgatgatcccaacatcctgaatgagaagaaatcttctgttgatgatcctaactgcctgaatgagaagaaatctgctgttgatgatcccaactacgtggatgagaggaaatcttctgttgatgatcccaattgccttaaggagaagaaatcttctgcttcaccatttaaaggtgaatttgacctgaatgctaagccagatagggacgacgagctttcaccaggctctgattctggtagcatgatgcgcatgatcaaacgtgctgctgagcaatatgtcaggcactgtgataatggaagttccgtgggtaaccaaagagatggagatggtgctggggagacaaatccgggtaattgtgttattgttagtggtagtcatcaagctgatgtagatcataataggcctttacccataagcgctgctgcatctttggcacctaatgaccagtaagttgctccctacatgaggcacctaaattagctgtgctatattaaaaaccagaggtactccgcagtgtatggaaatttgtacattttggctttgctggcgtcatgcattgtacatagatagacgtagcaagtagcaactgatgtaatctttctgcaatccacaggttgcattttgcaatgggcgcgaggtggcttacatatttattatataaatggctggaaaggttttggagtttaaaaaaaaaaaaaaaaaaanaaaaannaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="101770" stop="103254"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102070" g_stop="102940" g_length="871"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="871" r_length="871" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="884" polyA_stop="908"/>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E555621" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>871</cumulative_length_of_scored_exons>
        <coverage percentage="0.936" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E555621" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102070" e_stop="102940"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATGAGAAGAAATCTTCAGTTGATGACACAAATTACCTTAGTGAGAAGATATCTTCTGTTGATGACCCCAGCTACCTTAATGAGAAGGAATCTTCTGTTGATGATCCCAACATCCTGAATGAGAAGAAATCTTCTGTTGATGATCCTAACTGCCTGAATGAGAAGAAATCTGCTGTTGATGATCCCAACTACGTGGATGAGAGGAAATCTTCTGTTGATGATCCCAATTGCCTTAAGGAGAAGAAATCTTCTGCTTCACCATTTAAAGGTGAATTTGACCTGAATGCTAAGCCAGATAGGGACGACGAGCTTTCACCAGGCTCTGATTCTGGTAGCATGATGCGCATGATCAAACGTGCTGCTGAGCAATATGTCAGGCACTGTGATAATGGAAGTTCCGTGGGTAACCAAAGAGATGGAGATGGTGCTGGGGAGACAAATCCGGGTAATTGTGTTATTGTTAGTGGTAGTCATCAAGCTGATGTAGATCATAATAGGCCTTTACCCATAAGCGCTGCTGCATCTTTGGCACCTAATGACCAGTAAGTTGCTCCCTACATGAGGCACCTAAATTAGCTGTGCTATATTAAAAACCAGAGGTACTCCGCAGTGTATGGAAATTTGTACATTTTGGCTTTGCTGGCGTCATGCATTGTACATAGATAGACGTAGCAAGTAGCAACTGATGTAATCTTTCTGCAATCCACAGGTTGCATTTTGCAATGGCCGCGAGGTGCCTTACATATTTATTATATAAATGGCTGGAAAG</genome_strand>
        <mrna_strand>GTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATGAGAAGAAATCTTCAGTTGATGACACAAATTACCTTAGTGAGAAGATATCTTCTGTTGATGACCCCAGCTACCTTAATGAGAAGGAATCTTCTGTTGATGATCCCAACATCCTGAATGAGAAGAAATCTTCTGTTGATGATCCTAACTGCCTGAATGAGAAGAAATCTGCTGTTGATGATCCCAACTACGTGGATGAGAGGAAATCTTCTGTTGATGATCCCAATTGCCTTAAGGAGAAGAAATCTTCTGCTTCACCATTTAAAGGTGAATTTGACCTGAATGCTAAGCCAGATAGGGACGACGAGCTTTCACCAGGCTCTGATTCTGGTAGCATGATGCGCATGATCAAACGTGCTGCTGAGCAATATGTCAGGCACTGTGATAATGGAAGTTCCGTGGGTAACCAAAGAGATGGAGATGGTGCTGGGGAGACAAATCCGGGTAATTGTGTTATTGTTAGTGGTAGTCATCAAGCTGATGTAGATCATAATAGGCCTTTACCCATAAGCGCTGCTGCATCTTTGGCACCTAATGACCAGTAAGTTGCTCCCTACATGAGGCACCTAAATTAGCTGTGCTATATTAAAAACCAGAGGTACTCCGCAGTGTATGGAAATTTGTACATTTTGGCTTTGCTGGCGTCATGCATTGTACATAGATAGACGTAGCAAGTAGCAACTGATGTAATCTTTCTGCAATCCACAGGTTGCATTTTGCAATGGGCGCGAGGTGGCTTACATATTTATTATATAAATGGCTGGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E553095" ref_strand="+" ref_description="SGN-E553095 [cTSB-1-B12]">
      <seq>gtgcattcaagccctcagcatgaagagctgaacattgaaggttctgttgatcccaattaccttaatgagaagaaatcttctgttgaggatcccaattaccttgatgagaagaaatcttcagttgatgacacaaattaccttagtgagaagatatcttctgttgatgaccccagctaccttaatgagaaggaatcttctgttgatgatcccaacatcctgaatgagaagaaatcttctgttgatgatcctaactgcctgaatgagaagaaatctgctgttgatgatcccaactacgtggatgagaggaaatcttctgttgatgatcccaattgccttaaggagaagaaatcttctgcttcaccatttaaaggtgaatttgacctgaatgctaagccagatagggacgacgagctttcaccaggctctgattctggtagcatgatgcgcatgatcaaacgtgctgctgagcaatatgtcaggcactgtgataatggaagttccgtgggtaaccaaagagatggagatggtgctggggagacaaatccgggtaattgtgttattgttagtggtagtcatcaagctgatgtagatcataataggcctttacccataagcgctgctgcatctttggcacctaatgaccagtaagttgctccctacatgaggcacctaaattagctgtgctatattaaaaaccagaggtactccgcagtgtatggaaatttgtacattttggctttgctggcgtcatgcattgtacatagatagacgtagcaagtagcaactgatgtaatctttctgcaatccacaggttgcatttttgcatggccgcgaggtgccttacatatttattatataaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="+" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="101770" stop="103230"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102070" g_stop="102930" g_length="861"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="861" r_length="861" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="+" ref_id="SGN-E553095" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>861</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E553095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102070" e_stop="102930"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATGAGAAGAAATCTTCAGTTGATGACACAAATTACCTTAGTGAGAAGATATCTTCTGTTGATGACCCCAGCTACCTTAATGAGAAGGAATCTTCTGTTGATGATCCCAACATCCTGAATGAGAAGAAATCTTCTGTTGATGATCCTAACTGCCTGAATGAGAAGAAATCTGCTGTTGATGATCCCAACTACGTGGATGAGAGGAAATCTTCTGTTGATGATCCCAATTGCCTTAAGGAGAAGAAATCTTCTGCTTCACCATTTAAAGGTGAATTTGACCTGAATGCTAAGCCAGATAGGGACGACGAGCTTTCACCAGGCTCTGATTCTGGTAGCATGATGCGCATGATCAAACGTGCTGCTGAGCAATATGTCAGGCACTGTGATAATGGAAGTTCCGTGGGTAACCAAAGAGATGGAGATGGTGCTGGGGAGACAAATCCGGGTAATTGTGTTATTGTTAGTGGTAGTCATCAAGCTGATGTAGATCATAATAGGCCTTTACCCATAAGCGCTGCTGCATCTTTGGCACCTAATGACCAGTAAGTTGCTCCCTACATGAGGCACCTAAATTAGCTGTGCTATATTAAAAACCAGAGGTACTCCGCAGTGTATGGAAATTTGTACATTTTGGCTTTGCTGGCGTCATGCATTGTACATAGATAGACGTAGCAAGTAGCAACTGATGTAATCTTTCTGCAATCCACAGGTTGCATTTTGCAATGGCCGCGAGGTGCCTTACATATTTATTATATAAAT</genome_strand>
        <mrna_strand>GTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATGAGAAGAAATCTTCAGTTGATGACACAAATTACCTTAGTGAGAAGATATCTTCTGTTGATGACCCCAGCTACCTTAATGAGAAGGAATCTTCTGTTGATGATCCCAACATCCTGAATGAGAAGAAATCTTCTGTTGATGATCCTAACTGCCTGAATGAGAAGAAATCTGCTGTTGATGATCCCAACTACGTGGATGAGAGGAAATCTTCTGTTGATGATCCCAATTGCCTTAAGGAGAAGAAATCTTCTGCTTCACCATTTAAAGGTGAATTTGACCTGAATGCTAAGCCAGATAGGGACGACGAGCTTTCACCAGGCTCTGATTCTGGTAGCATGATGCGCATGATCAAACGTGCTGCTGAGCAATATGTCAGGCACTGTGATAATGGAAGTTCCGTGGGTAACCAAAGAGATGGAGATGGTGCTGGGGAGACAAATCCGGGTAATTGTGTTATTGTTAGTGGTAGTCATCAAGCTGATGTAGATCATAATAGGCCTTTACCCATAAGCGCTGCTGCATCTTTGGCACCTAATGACCAGTAAGTTGCTCCCTACATGAGGCACCTAAATTAGCTGTGCTATATTAAAAACCAGAGGTACTCCGCAGTGTATGGAAATTTGTACATTTTGGCTTTGCTGGCGTCATGCATTGTACATAGATAGACGTAGCAAGTAGCAACTGATGTAATCTTTCTGCAATCCACAGGTTGCATTTTTGCATGGCCGCGAGGTGCCTTACATATTTATTATATAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E294407" ref_strand="+" ref_description="SGN-E294407 [cLET-14-E6]">
      <seq>ttacagcctgccatgttcgaagattttgtgaagcctttccaaataaacatggaggaggaaggaccattgcctcataatgaccgtttgagttatcaaccgctggacatttatcctgcgcccctccacagaagttaacatcaatggtggttgtttgagttttctggtcagaccgacatcggaagttgcctagtagtgaatgttgaggtttagagacaatgtcctttttcacatcaactctgaccaaaacctttgcaaaccaacagaaaggctgcttagtagatagtaaggttgggttgcaaatgttccattttttattatttaggcacatttttgtttcttctttccttcttttgctctcttttcttttcccttaatttatttcatggtttaaatagagcaactttgtacaagaaagaccaatgagaatcgaaaatgtaaaatttggctatttatataagttaatgttaagtaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="117867" stop="116442"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117567" g_stop="117511" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="117510" i_stop="117160" i_length="351">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="117159" g_stop="116749" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="468" r_length="411" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="116748" i_stop="116655" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="116654" g_stop="116641" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="482" r_length="14" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E294407" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E294407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117567" e_stop="117511"/>
          <exon e_start="117159" e_stop="116749"/>
          <exon e_start="116654" e_stop="116641"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACAGCCTGCCATGTTCGAAGATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAGGTAATATAATATTTTCAGATTCTCAATCTTCATATTTACTTTCAAGAGATAATGTGAAGTCTTTATAACAATACCATTCTCTTTAGAAACGTGAGAATAGGGATAATATAGAATGTGTACAATGCAACCCAGTAATATGTCTGCTGTTATTTTTGTTTTAAACATCCTGTTGCTTTGCATGACGGGGATGGGGCTCTCAAAGTAGATTGTACGAGGCTTGTCGCGTGCTTTTGCTTAATGATCTGAGTCAGGGGCAACCTTCTTCCTTGTGAATATTTTTAGCTCGCAATCTCATGCAGATTTTGATTTTCTCAATTGTACTGTGCCTATAAAAATGTTTTAAATTCTCAGGAAGGACCATTGCCTCATAATGACCGTTTGAGTTATCAACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAACATCAATGGTGGTTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTAATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTATATAAGTTAATGTTAAGTATATATTCATCCTCTCGATGTTCTCAAATGGAGTAGTAAATGTACAATACTATGACTTGTTTGAGTTATTCTCAATATTCTTATATCTATAGGTAAAAAGAAAAAA</genome_strand>
        <mrna_strand>TTACAGCCTGCCATGTTCGAAGATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAG...............................................................................................................................................................................................................................................................................................................................................................GAAGGACCATTGCCTCATAATGACCGTTTGAGTTATCAACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAACATCAATGGTGGTTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTAATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTATATAAGTTAATGTTAA..............................................................................................GTAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E341394" ref_strand="+" ref_description="SGN-E341394 [cTOE-23-B9]">
      <seq>tttgagttatcaaccgctggacatttatcctgcgttcctccacagaagttaacatcaatggtgggtgtttgagttttctggtcagaccgacatcggaagttgcctagtagtgaatgttgaggtttagagacaatgtcctttttcacatcaactctgaccaaaacctttgcaaaccaacagaaaggctgcttagtagatagtaaggttgggttgcaaatgttccattttttattatttaggcacatttttgtttcttctttccttcttttgctctcttttcttttcccttaatttatttcatggtttaaatagagcaactttgtacaagaaagaccaatgagaatcgaaaatgtaaaatttggctatttatataagttaatgttaagtatatattcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="117433" stop="116438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117133" g_stop="116739" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="395" r_length="395" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116738" i_stop="116655" i_length="84">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="116654" g_stop="116643" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="407" r_length="12" r_score="0.750"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E341394" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>407</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E341394" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117133" e_stop="116739"/>
          <exon e_start="116654" e_stop="116643"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGAGTTATCAACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAACATCAATGGTGGTTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTAATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTATATAAGTTAATGTTAAGTATATATTCATCCTCTCGATGTTCTCAAATGGAGTAGTAAATGTACAATACTATGACTTGTTTGAGTTATTCTCAATATTCTTATATCTATAGGTAAAAAGAAAA</genome_strand>
        <mrna_strand>TTTGAGTTATCAACCGCTGGACATTTATCCTGCGTTCCTCCACAGAAGTTAACATCAATGGTGGGTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTAATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTATATAAGTTAATGTTAAGTATATATTC....................................................................................AAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E365904" ref_strand="+" ref_description="SGN-E365904 [cLPT-11-D11]">
      <seq>gaaggcatgcaataaaggatccacgcaggaaggcaacatttgaggctcttatttctcagcttgacggggagaaagaaaaaactggtgttgataggttttcactaagacaagctgtcatatttatctgtgcaaccaatcggccagatgaactggacttagaatttgtccgccctggacgtattgacagacgtgtgtatattggtttaccagatgcaaagcaacgagtgcaaatttttggagttcacagtgctgggaaacagctttccgaggatattgcctttgagaaacttgtctttcgtacagttggatattctggggcagacataagaaatctagtcaatgaagctggaataatgtctgtaagaaaaggacattctaagatcaaccagcaggatatcgtcgatgttttggacaagcaattgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="127277" stop="123225"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="126977" g_stop="126908" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="126907" i_stop="126246" i_length="662">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.880" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="126245" g_stop="126029" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="287" r_length="217" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126028" i_stop="124675" i_length="1354">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="124674" g_stop="124603" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="359" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="124602" i_stop="123590" i_length="1013">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.164" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="123589" g_stop="123525" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="424" r_length="65" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E365904" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E365904" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="126977" e_stop="126908"/>
          <exon e_start="126245" e_stop="126029"/>
          <exon e_start="124674" e_stop="124603"/>
          <exon e_start="123589" e_stop="123525"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGGCATGCAAGAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTGATTTCTCAGCTTGACGGGGAGTGAGTATCGTAATCTCATTTCATGGATATAATACTCTTCTTTGCAATGAAAATTTCATATTGGAGAACACTATAGTACAGCTGTTTTTGATGAGATCTGATTCTAGAATCTTATTCTGCAGTCTGGTTGATATGGCTTCTCAAAGAAGAACATTTCCCTTTCTTCCCTACCCTGTCTACAATCTTTAGCCAGTGAAATCTTTTGCTGTTGAATTATGCATTTTTATATTATGAGGCAATGAAAAATCTTGTGAACTTTGGAGTCTTTTGCTCTTTTTGTCGAACTATGAACAAATATGAGTTAATGTGTCTTGGCAAATTGACTAACTTGCAGCACCTAACAGTTTAATTAATATGTGGACATCACTTTATAATGTCCTTTAAGTGTTGTTTCAAAGAAGAGAAAATATGACGCATGTTCTGTTTGCATCTTCTGTTACGAGTTAGCAATATTTTCTCATACTGGAAACGCCAAGATTTCTGTGATTATTTATTTTGGTATGTTTATCAAGTGTACTGCTAGAGATAGAAATTACAGTAACATGCCTAGCAAAAAAGATTACTCTAATATTCTAGAGAAGTATTGAAGGCAAAGCCATTTTTTCTCTCCTATATCCCTGTATGGTTGTGCAGCCAAGATAATAAAGGACTTGTTTGTGCAGGAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGTCATATTCATTTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGTCCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGAGTTCACAGTGCTGGGAAACAGCTTTCCGAGGATATTGCCTTTGAGAAAGTAAATCACTTGCTTCATTACCCCTTTTTTTCCACTAATCCATTCATTCTTATTCATTACTGAGTCATTAAGTAATAAAAGCTACAAATGTAACATTTTTTTCAACCCAACAAAAGCACTACCCTTTAACTTGCCCAAAATCCAAACAACCCCAAACACCTGTCTAAGAACTAGTAAATTCGGCAACAGCCTTAGAGCGTGTTTGGTTTGACTTATTTTAGGTGCTTTTAAGATAAAATAGTTTTATAGCAGTTTTGGAGTGTTTGGATAAAATAAAAAAATGGTTTGGACTTGGGACTTCCATGTTGGATGTCTCAAGTTCGAAACCCCTTGCTAGCGAAAGAAAGGGGTTTGCCTTCTGGGTCGAGCTCGTCGCATCGGGCTTGCCTAGTGCTGGTTACCTCTCCTATGTAGTTTATTGCATAGGAGCGGGAGTTTTACCTTGTGCGGACCCAAAGGGTAGCGGCTGCGGGTTTCCCTTGTCATTAGAAAAAAAAAGTGCTTATAAGCACCTGTTTTAAGCCAAAATAACATAAATAACTTATGGCTTATAAGTCATAAGCCAAAAGCCAATCCAAACAGGCTCTTTGTCCTCTTAGTTCAGAAACATCATGTTTAGCCAACTCACCGGACAACAAAAGCCTAACAGCAGTCTGAATTTCCCTAGAAGTGATAGTAGGCTTCTTATTATACCTAGCCAATCTTGAAGACTCCTGAGCAAGCTTCTCAACTATATCATTGATGAAATTGTTCATGTTCCCCATAGTCTTGCTTGAAATATCAATATCTGGGTGAACTTGATTCAGCACCTTGAAAATGTAGATGTAAGTCTCAACAGTCAACACTCTTTTCATTGTCAGCACCACCAGCACCTGATTTCTTTGGTAACTTCTTCCCTGCCCTTGGATTCTTCTCTGCTGGTGCTTTTTCAGCCTTTCCTCCTCTGTTGCTGCTGGTTTCCTCTCTGCTGGATTTTTATCTGCTTTTTGTGCCAATGAAACAGAAATTCAGAATCTGAAAATGGGTTACTAAGAAAAGGGAAGTAAAAGATTCTTGGCTTGTGAAATGAGTTTGTCTTGGTGCTTCATTAGTTCTCATTGTTGGCTTGGGATCTCCTCTTCCAGTTGATTTGCTTGAATGTAAAATTACTTTCACGTTATATACAGCTTCTTTCAAGGGTTAGCAGCAACACTACTGCAGTGTAGTAACTGCACATGCCAAAAGCTAGTTGTTCCTTTCTTGTACTTAGTTGCTAGAAGACAATGATGTTCTTTTTGTTAGACTTAATGTATGCTCCATTTGGGCTCAGGTTTAGGAATTTGATTGTTGAACTGTATTCCTTGCACTTCTGCAGCTTGTCTTTCGTACAGTTGGATATTCTGGGGCAGACATAAGAAATCTAGTCAATGAAGCTGGAATAATGTCTGTAAGTTTGTTCTTTGTATTTTCCGTTGATATATAACGTCTCTACTCACTTTTGGAGCTTCATATTAGTTGACGGTTGACCTATTGTTTTCTTGACAAGTTCTGTTATCTTAAACAATGTATGTTATTGACAATTGACTTCAAATAATTAACATTGAGACTTGTAGAACACAACATACATTTTTTTCTTGTAAAAATGTATATTAGATTGCATATTTGAGATCATGTAATTAGCTTTTTGCTGTAACGGTAGACTTCACAGCATGATTTTCTTGGGAAAAAAAAAAGAAAATTTAATGGTGGATAGCGAGGAGTTTACCTTTTGGATCGAGCTCGTCGCATTGGGCCTGCCTAGTGCGGGTTAACTCTCTTGTGTGGTTTGCGAGTATTGCATAGGAGCAAGAGTTTTACCTTGTGTGCACCCAAAGAGTAGCGAGTGTAAGTTTCCCTTGACATCAAAAAATTAGGTGGTGGATAGGAAAACATAGAATATTTTAAGAGAAGTAAATGAGGCAAGCTTAGGTGGCTCCGACTGAAAGTTGTTGAGCAGATTCCTGGAAAGTAAACCAACGAGCTGTCACCACAAGTGCCTTTTAAAATCACCTTTCTTAATGATCAATTTATCTATAGCAGGGGAAAACACAAACCATAAAATTGATTAAAACATCTTCTCAGGCACCCTTATAACTTAAGTGCATGCATCGCCTAACCTCCACCTTAACTCCTCCATCACATACCAATATCAAACAGACACTGATAAATCCAAACTTCGACGACTGATTAAACTAATTAAAACTTAAAATATATGTGATATATGCTAACTACTGTCCTCATTAGGAATCATTATTATAAGATTAAGGCTCGGTTAATCCAAGTTGAAATAGGGTGTCTTTCCAGTTTCACTCTTTTTAAATAGGGTGTCTTATCACTTATGTATGGAGGGAAGATGTTTTCCTCAAGGACAATCATGTTTTCTGGCTTTCCATTTTCTTGAGAGTGGTAGCTTACATGCAGGTAAGAAAAGGACATTCTAAGATCAACCAGCAGGATATCGTCGATGTTTTGGACAAGCAATTGCT</genome_strand>
        <mrna_strand>GAAGGCATGCAATAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTTATTTCTCAGCTTGACGGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGTCATATTTATCTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGTCCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGAGTTCACAGTGCTGGGAAACAGCTTTCCGAGGATATTGCCTTTGAGAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCTTTCGTACAGTTGGATATTCTGGGGCAGACATAAGAAATCTAGTCAATGAAGCTGGAATAATGTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGAAAAGGACATTCTAAGATCAACCAGCAGGATATCGTCGATGTTTTGGACAAGCAATTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E315508" ref_strand="+" ref_description="SGN-E315508 [cTOA-22-L20]">
      <seq>ctgcacgaatcaatgaaatgttttctgttgctaggagaaatgctccagcttttgtatttatagatgagattgatgctattgctggaaggcatgcaagaaaggatccacgcaggaaggcaacatttgaggctctgatttctcagcttgacggggagaaagaaaaaactggtgttgataggttttcactaagacaagctgtcatattcatttgtgcaaccaatcggccagatgaactggacttagaatttgtcccgccctggacgtattgacagacgtgtgtatattggtttaccagatgcaaagcaacgagtgcaaatttttgggagtcacagtgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="128577" stop="125765"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128277" g_stop="128237" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="128236" i_stop="127021" i_length="1216">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="127020" g_stop="126908" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="154" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="126907" i_stop="126246" i_length="662">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.880" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="126245" g_stop="126065" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="336" r_length="182" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E315508" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>335</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E315508" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128277" e_stop="128237"/>
          <exon e_start="127020" e_stop="126908"/>
          <exon e_start="126245" e_stop="126065"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCACGAATCAATGAAATGTTTTCTGTTGCTAGGAGAAATGTAAGTCTACTTCTTCTAATAAAAAAATTGACATCATATAGGGATGGGAATGTTCCTCAAAGTAAAAAAATTGCATCTTATGATTTCTATACCGAAAGCAGCTACCAGTCAAATGTTAAAGGGGGTGGGGGGGGGGGGGGGTAAGTCTCCAAGGAAACTTCTAAACCAGTAACAAATATTCAGTCTAACTCAAAACCAGAAACTTATTTTTGTCTAGTGTGCTTTTACGATGCATTAAGCATAAGTTACTTTAGCTGTTAGTCTTTTTTCAATTTATGTTAAACTCTTGGTCTCACTATTTGAAGTTTGAACCAAACACGAATAACCAGGTCTTGAGCATGCTGAGTAACTACTGGGGATGAAGTACAACAACAACAATCCAGTATATTCCCTCATGTGGAGTCTGTGGAGGGTCAGGTGTACGCAGATTCCTACCTTGAGGGGGTATAGAGGTTGTTTTCCGATATACCCTTGGTTCGAGAATAGTTTTGAAAGAAGAACAAGAGTAAAAATCAATGATGAGGATAATGAAGAAAGTAAAGCACTGAGAGTAAAATAGTGTAGATAACCAAAGTAAATGAAACATCACCAGTGTTTTGGAGAGTGAGAAGCGGAAAAGAGCGACAAGGGCTCGGCGTGAAGCAAAGCACACTTCTTTCAACTGAACTGCTATTCAATACAAAAATAAAGAAATATCAAATATGTTTTACTATCTTACCTAATTTGGCCCACTTCGTGCCCCAGAAGGTAGCACTTAATACGAAAATATTAGCCATGTGGGTGCATATACTGGCTGGTACTTCTTGCGGTAGCGGAAGCTATTTGTGTCTACTAAGATCGTAGATGTTTTGATACCATGTGAAAATAATTAAAAAACTTCTCATGAACTTGATTAACAAGGTACAAGAGGTGGTCCTTATAGGAGTATTAGGTTACATATAGTAAGAAGGTAATCGATCTCTATGCTGATAAGGTTAATAAATTCTATTTATTAAATACAATATATGCTAAGGTACCTTATAAATTTTTTAAAATGAATTTCCTTGGGTTGAGGCCCTTTTCCCAACCCTACTGCATTTATGACCGGTCTGCCTTTTTTTTTTAATGTACAAGAAACAAGATTATATGAATCTAGACACATATTTACTCGTAATTCAACAATTTACTTTTGCTAATTCAAGGGGATAAAATTTACATTCAGTTGTCCTCTTTGTAGGCTCCAGCTTTTGTATTTATAGATGAGATTGATGCTATTGCTGGAAGGCATGCAAGAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTGATTTCTCAGCTTGACGGGGAGTGAGTATCGTAATCTCATTTCATGGATATAATACTCTTCTTTGCAATGAAAATTTCATATTGGAGAACACTATAGTACAGCTGTTTTTGATGAGATCTGATTCTAGAATCTTATTCTGCAGTCTGGTTGATATGGCTTCTCAAAGAAGAACATTTCCCTTTCTTCCCTACCCTGTCTACAATCTTTAGCCAGTGAAATCTTTTGCTGTTGAATTATGCATTTTTATATTATGAGGCAATGAAAAATCTTGTGAACTTTGGAGTCTTTTGCTCTTTTTGTCGAACTATGAACAAATATGAGTTAATGTGTCTTGGCAAATTGACTAACTTGCAGCACCTAACAGTTTAATTAATATGTGGACATCACTTTATAATGTCCTTTAAGTGTTGTTTCAAAGAAGAGAAAATATGACGCATGTTCTGTTTGCATCTTCTGTTACGAGTTAGCAATATTTTCTCATACTGGAAACGCCAAGATTTCTGTGATTATTTATTTTGGTATGTTTATCAAGTGTACTGCTAGAGATAGAAATTACAGTAACATGCCTAGCAAAAAAGATTACTCTAATATTCTAGAGAAGTATTGAAGGCAAAGCCATTTTTTCTCTCCTATATCCCTGTATGGTTGTGCAGCCAAGATAATAAAGGACTTGTTTGTGCAGGAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGTCATATTCATTTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGT-CCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGAGTTCACAGTGCT</genome_strand>
        <mrna_strand>CTGCACGAATCAATGAAATGTTTTCTGTTGCTAGGAGAAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGCTTTTGTATTTATAGATGAGATTGATGCTATTGCTGGAAGGCATGCAAGAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTGATTTCTCAGCTTGACGGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGTCATATTCATTTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGTCCCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGGAGTCACAGTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E315442" ref_strand="+" ref_description="SGN-E315442 [cTOA-22-B11]">
      <seq>agaacaattagattcagtaaatgcgaggtatgtggttgaatttgacatgaaggaagttgagaacagccttcgcaaagatgttgttgagaagacaagagaaactcaaggaaccagggcattgtggatctcgaaaagatggtggagatatcgcccgaaacttccctatacctattttcttcaaaaacttgatacttctgaggtggctgctatagtcttcacagaggatctgaagagagtgtttgtcacaatgaaagaaggattccctcttgaatatattgttgatattccactagatcctttcttatttgagatgatatcaagttctggagctgaagtagatctacttcagaagcggcagattcattactttttcaaagttctttttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="130006" stop="128555"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129706" g_stop="129508" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="199" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129507" i_stop="129134" i_length="374">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129133" g_stop="129056" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="277" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129055" i_stop="128966" i_length="90">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="128965" g_stop="128855" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="388" r_length="111" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E315442" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>388</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E315442" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129706" e_stop="129508"/>
          <exon e_start="129133" e_stop="129056"/>
          <exon e_start="128965" e_stop="128855"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAACAATTAGATTCAGTAAATGCGAGGTATGTGGTTGAATTTGACATGAAGGAAGTTGAGAACAGCCTTCGCAAAGATGTTGTTGAGAAGACAAGAGAAACTCAAGGAACCAGGGCATTGTGGATCTCGAAAAGATGGTGGAGATATCGCCCGAAACTTCCCTATACCTATTTTCTTCAAAAACTTGATACTTCTGAGGTAAATGTTTATCTTCTCACTTCTGTATCTCTTCATACTCAGATATGGTTGGTCCCTTCTGGTTCTAATGCTTCCAAGTGGAAATAAGTGTGGATGCTTTTAAATCTACAGTATTAATGAATACATGGTACATTTTAAGGATTGTACTTCAAGTTGTGGCATGGGTGACTTGATGCCACCCTATTCTTCATTCTTTTGAATGATGTTATAAGGGAAAATAGCAAAAGATAGATTTCTTAAAGAAAACAGTTTCCTTTTCTTGAACTCTAGCTGGAAACTAAAATTATCTTTTACATGTGGATCAAACTAATTTATTTTCTTTACTTGGATATGGACGCACTTCCAACTAGATTTACTGACTTAGTGTTCTGCAGGTGGCTGCTATAGTCTTCACAGAGGATCTGAAGAGAGTGTTTGTCACAATGAAAGAAGGATTCCCTCTTGAATATATTGTGCGTAAGACATATTAACCTTTCCAGAATAAAGTCATCACTGTTCCTGAACTCCTGACCTTTATACTGATTAATGTATTCTCTTCTCAGGTTGATATTCCACTAGATCCTTTCTTATTTGAGATGATATCAAGTTCTGGAGCTGAAGTAGATCTACTTCAGAAGCGGCAGATTCATTACTTTTTCAAAGTTCTTTTTGCT</genome_strand>
        <mrna_strand>AGAACAATTAGATTCAGTAAATGCGAGGTATGTGGTTGAATTTGACATGAAGGAAGTTGAGAACAGCCTTCGCAAAGATGTTGTTGAGAAGACAAGAGAAACTCAAGGAACCAGGGCATTGTGGATCTCGAAAAGATGGTGGAGATATCGCCCGAAACTTCCCTATACCTATTTTCTTCAAAAACTTGATACTTCTGAG......................................................................................................................................................................................................................................................................................................................................................................................GTGGCTGCTATAGTCTTCACAGAGGATCTGAAGAGAGTGTTTGTCACAATGAAAGAAGGATTCCCTCTTGAATATATT..........................................................................................GTTGATATTCCACTAGATCCTTTCTTATTTGAGATGATATCAAGTTCTGGAGCTGAAGTAGATCTACTTCAGAAGCGGCAGATTCATTACTTTTTCAAAGTTCTTTTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E317983" ref_strand="+" ref_description="SGN-E317983 [cTOA-30-H13]">
      <seq>agaccggcgacaattcagtttttccgacgagcaagagagccgaaaccgaagcattatcttcgtattctctaagcttctcaatgcatctaaccactactcctcctcctcaacagctgaattcaatacaattatcttcaaaaccccttttactcacattgccattcaaatgcagaaggaagttttcccgtataagaagacctaccattgtagcttcttcttccaatactaataacagtcctgaagggttttcttggctgcaactttcacagtccattcgccgtggttccgaacgtttcttgaatcaattggaagactctgtgaagcaagagacgggttttgattttaaggatgttaaagttaaagttggggaattttcaggtcgagctgttgattcagccaagaatggccaagttttgctgcaacgttttcagtctgagttgtttcctgagttcttgaattggaacaaattcgagtcctggaaggtgaattttcccatttcttatttgagttatttgtataactttgtgctcacattatcctttttccccttcccccaggacgtcaagaaatgggattccaaaagagttggtgtattcattctctatattatagttacggtatgttcttgtcaaaaatatatatggcaattcgagctcctattattaatagggaaagaaaagaacttactgaggcatacatggaagcattgattcctgaacctactcctggtaatgtcaaaaggtaaacacaatcaaactgctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="132780" stop="131415"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132480" g_stop="131715" g_length="766"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="763" r_length="763" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E317983" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>766</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E317983" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="132480" e_stop="131715"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACCGGCGACAATTCAGTTTTTCCGACGAGCAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAGGTGAATTTTCCCATTTCTTATTTGAGTTATTTGTATAACTTTGTGCTCACATTATCCTTTTTCCCCTTCCCCCAGGACGTCAAGAAATGGGATTCCAAAAGAGTTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTCAAAAAATATATATGGCAATTCGAGCTCCTATTATTAATAGGGAAAGAAAAGAACTTACTGAGGCATACATGGAAGCATTGATTCCTGAACCTACTCCTGTTAATGTCAAAAGGTAAAACACAAATCAAACTGCTAA</genome_strand>
        <mrna_strand>AGACCGGCGACAATTCAGTTTTTCCGACGAGCAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAGGTGAATTTTCCCATTTCTTATTTGAGTTATTTGTATAACTTTGTGCTCACATTATCCTTTTTCCCCTTCCCCCAGGACGTCAAGAAATGGGATTCCAAAAGAGTTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTC-AAAAATATATATGGCAATTCGAGCTCCTATTATTAATAGGGAAAGAAAAGAACTTACTGAGGCATACATGGAAGCATTGATTCCTGAACCTACTCCTGGTAATGTCAAAAGGT-AAACAC-AATCAAACTGCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E317746" ref_strand="+" ref_description="SGN-E317746 [cTOA-30-I13]">
      <seq>agaccggcgacaattcagtttttccgacgagcaagagagccgaaaccgaagcattatcttcgtattctctaagcttctcaatgcatctaaccactactcctcctcctcaacagctgaattcaatacaattatcttcaaaaccccttttactcacattgccattcaaatgcagaaggaagttttcccgtataagaagacctaccattgtagcttcttcttccaatactaataacagtcctgaagggttttcttggctgcaactttcacagtccattcgccgtggttccgaacgtttcttgaatcaattggaagactctgtgaagcaagagacgggttttgattttaaggatgttaaagttaaagttggggaattttcaggtcgagctgttgattcagccaagaatggccaagttttgctgcaacgttttcagtctgagttgtttcctgagttcttgaattggaacaaattcgagtcctggaaggtgaattttcccatttcttatttgagttatttgtataactttgtgctcacattatcctttttccccttccccccaggacgtcaagaaatgggattccaaaagaagtggtgtattcattctctatattatagttacggtatgttcttgtcaaaaatatatatggcaattcgagctcctatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="132780" stop="131519"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132480" g_stop="131819" g_length="662"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="662" r_length="662" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E317746" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E317746" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="132480" e_stop="131819"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACCGGCGACAATTCAGTTTTTCCGACGAGCAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAGGTGAATTTTCCCATTTCTTATTTGAGTTATTTGTATAACTTTGTGCTCACATTATCCTTTTTCCCCTT-CCCCCAGGACGTCAAGAAATGGGATTCCAAAAGAGTTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTCAAAAAATATATATGGCAATTCGAGCTCCTATT</genome_strand>
        <mrna_strand>AGACCGGCGACAATTCAGTTTTTCCGACGAGCAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAGGTGAATTTTCCCATTTCTTATTTGAGTTATTTGTATAACTTTGTGCTCACATTATCCTTTTTCCCCTTCCCCCCAGGACGTCAAGAAATGGGATTCCAAAAGAAGTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTC-AAAAATATATATGGCAATTCGAGCTCCTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E253670" ref_strand="-" ref_description="SGN-E253670 [cLEG-32-D9]">
      <seq>attccagtctatgatggttcatggacagaatgggcaacacagccagatacacctctctgcacatctgaaagatgaagacgtttgtatggcctgcctagtttttatgggtgagcaatgatgattgtgaatctagatctggttccttttcttaatggttagtgcaacaacttacattgtattgttgaatgataacaacggaaaaatttcttctctgttgtacaaaatgccttaattttaccttcattatatttttggttagtgcaacaacttccattaactatactttgtactaaaaaacactcttatgcttggataagtgaacttagaaaggcccctgaaatcaaatgtattcatgcgttgtccagttggagtttatatttgatgtgtcattgaacataaaactacgctatgcgtgattataaatatttagcgaaatagatatttgtatttatacatataatcatttttggaacttataaaaaaaaaaaaaaaaaaaaaactcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="134814" stop="133735"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="134514" g_stop="134036" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="479" r_length="479" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="480" polyA_stop="500"/>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E253670" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253670" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="134514" e_stop="134036"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCCAGTCTATGATGGTTCATGGACAGAATGGGCAACACAGCCAGATACACCTCTCTGCACATCTGAAAGATGAAGACGTTTGTATGGCCTGCCTAGTTTTTATGGGTGAGCAATGATGATTGTGAATCTAGATCTGGTTCCTTTTCTTAATGGTTAGTGCAACAACTTACATTGTATTGTTGAATGATAACAACGGAAAAATTTCTTCTCTGTTGTACAAAATGCCTTAATTTTACCTTCATTATATTTTTGGTTAGTGCAACAACTTCCATTAACTATACTTTGTACTAAAAAACACTCTTATGCTTGGATAAGTGAACTTAGAAAGGCCCCTGAAATCAAATGTATTCATGCGTTGTCCAGTTGGAGTTTATATTTGATGTGTCATTGAACATAAAACTACGCTATGCGTGATTATAAATATTTAGCGAAATAGATATTTGTATTTATACATATAATCATTTTTGGAACTTATAA</genome_strand>
        <mrna_strand>ATTCCAGTCTATGATGGTTCATGGACAGAATGGGCAACACAGCCAGATACACCTCTCTGCACATCTGAAAGATGAAGACGTTTGTATGGCCTGCCTAGTTTTTATGGGTGAGCAATGATGATTGTGAATCTAGATCTGGTTCCTTTTCTTAATGGTTAGTGCAACAACTTACATTGTATTGTTGAATGATAACAACGGAAAAATTTCTTCTCTGTTGTACAAAATGCCTTAATTTTACCTTCATTATATTTTTGGTTAGTGCAACAACTTCCATTAACTATACTTTGTACTAAAAAACACTCTTATGCTTGGATAAGTGAACTTAGAAAGGCCCCTGAAATCAAATGTATTCATGCGTTGTCCAGTTGGAGTTTATATTTGATGTGTCATTGAACATAAAACTACGCTATGCGTGATTATAAATATTTAGCGAAATAGATATTTGTATTTATACATATAATCATTTTTGGAACTTATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E744700" ref_strand="+" ref_description="SGN-E744700 [GI|19571830]">
      <seq>ggtatctcttggacaagcctataggtgcctcttgtggcacaggtgtaactgcttgcgtacttgtcttgggcctccatcgactggggaagactgacattccagtctatgatggttcatggacagaatgggcaacacagccagatacacctctctgcacatctgaaagatgaagacgtttgtatggcctgcctagtttttatgggtgagcaatgatgattgtgaatctagatctggttccttttcttaatggttagtgcaacaacttacattgtattgttgaatgataacaacggaaaaatttcttctctgttggacaaaatgccttaattttaccttcattatatttttggttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="135042" stop="133957"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="134742" g_stop="134674" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="134673" i_stop="134542" i_length="132">
            <donor d_prob="0.923" d_score="0.98"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="134541" g_stop="134257" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="353" r_length="285" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="354" polyA_stop="386"/>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E744700" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>354</cumulative_length_of_scored_exons>
        <coverage percentage="0.917" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E744700" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="134742" e_stop="134674"/>
          <exon e_start="134541" e_stop="134257"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTATCTCTTTGGACAAGCCTATAGTTGCCTCTTGTGGCACAGGTGTAACTGCTTGCGTACTTGTCTTGGTCAGTTGAATCCTCTCTCTCTCTCATACAGCTTTCGCTTGTACTGTTGTACATTAATCTATGCCCAGTATTCATATGGCTATTCCATCGTCTCAAAAGAGGGATGAATTCAAAGTTCATTTATCTTTTTAGGGCCTCCATCGACTGGGGAAGACTGACATTCCAGTCTATGATGGTTCATGGACAGAATGGGCAACACAGCCAGATACACCTCTCTGCACATCTGAAAGATGAAGACGTTTGTATGGCCTGCCTAGTTTTTATGGGTGAGCAATGATGATTGTGAATCTAGATCTGGTTCCTTTTCTTAATGGTTAGTGCAACAACTTACATTGTATTGTTGAATGATAACAACGGAAAAATTTCTTCTCTGTTGTACAAAATGCCTTAATTTTACCTTCATTATATTTTTGGTTA</genome_strand>
        <mrna_strand>GGTATCTC-TTGGACAAGCCTATAGGTGCCTCTTGTGGCACAGGTGTAACTGCTTGCGTACTTGTCTTG....................................................................................................................................GGCCTCCATCGACTGGGGAAGACTGACATTCCAGTCTATGATGGTTCATGGACAGAATGGGCAACACAGCCAGATACACCTCTCTGCACATCTGAAAGATGAAGACGTTTGTATGGCCTGCCTAGTTTTTATGGGTGAGCAATGATGATTGTGAATCTAGATCTGGTTCCTTTTCTTAATGGTTAGTGCAACAACTTACATTGTATTGTTGAATGATAACAACGGAAAAATTTCTTCTCTGTTGGACAAAATGCCTTAATTTTACCTTCATTATATTTTTGGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato" ref_id="SGN-E392059" ref_strand="+" ref_description="SGN-E392059 [TUS-24-J1](-)">
      <seq>atggtgttgcaccagagcctcgaaaaggaattaacagtggacatgtacccgggagcaagtgtattccttttccacagatgttggatggctcacagacactcttatcccgtgaagagctcgagaaaaaatttggtcaagaaggtatctctttggacaagcctatagttgcctcttgtggcacaggtgtaactgcttgcgtacttgtcttgggcctccatcgactggggaagactgacattccagtctatgatggttcatggacagaatgggcaacacagccagatacacctctctgcacatctgaaagatgaagacgtttgtatggcctgcctagtttttatgggtgagcaatgatgattgtgaatctagatctggttccttttcttaatggttagtgcaacaacttacattgtattgttgaatgataacaacggaaaaatttcttctctgttgtacaaaatgccttaattttaccttcattaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02HBa0329G05-MbIvG/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02HBa0329G05.3" temp_strand="-" temp_description="C02HBa0329G05.3  AC215441.2 htgs_phase:3 submitted_to_sgn_as:C02HBa0329G05 sequenced_by:kribb upload_account_name:korea">
        <position start="138260" stop="133967"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="138202" g_stop="138126" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="138125" i_stop="135311" i_length="2815">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="135310" g_stop="135247" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="141" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="135246" i_stop="134742" i_length="505">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="134741" g_stop="134674" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="209" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="134673" i_stop="134542" i_length="132">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="134541" g_stop="134270" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="481" r_length="272" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="482" polyA_stop="493"/>
      <MATCH_line gen_id="C02HBa0329G05.3" gen_strand="-" ref_id="SGN-E392059" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02HBa0329G05.3" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392059" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="138202" e_stop="138126"/>
          <exon e_start="135310" e_stop="135247"/>
          <exon e_start="134741" e_stop="134674"/>
          <exon e_start="134541" e_stop="134270"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGTGTTGCACCAGAGCCTCGAAAAGGAATTAACAGTGGACATGTACCCGGGAGCAAGTGTATTCCTTTTCCACAGGTGAGGATCTGTGCATTGAAGAAAAAAAACGATTTTTCAATATTCTATGGCAGTTTTCCTGTTTCATCTCCTGTATAAAAACATTTCCTGCTTTCAAATGAAGATATGGTGAAGTATTTCTGTTTGAATAGGTTAAACTATTTGTCTCATATTTCCACTGTGCTTGATGCTCCTTGACCATGGATAATTTACTTCCAGTCATTGATATCATCTGGACTACCGAGTGCATGACAATATAAGTTTCTAACAGTTGACAATGATCAAAACCATGAGCTTGTACTAAGTTTGATGCATTTTGCTTAAAACCTTGTAACAGAATGTTAAGGCCCAAATTATGAAATTTCAATACTATGCCTCTCAGAGATGCAAGTCACAAAAATGAATGTGAAAATGCTCTCAGGCACAGTTATTGAGGTCAGAAAAGACTTGTTCTTTTCCAGCCGTTTGTAAAGTTTCTGGCATCTTTACAGTTATTCGTTAATCACATTCATCAGTTATTACTACAAAAATTGGTATAGATTCAACATGTGTGGGGAAGGTTTGGTTTGAATGGGTGGAATAAAACAGAAGGTTGATGTGCGGAGCTACTTTTAGTAGAAAAACCATGGAGTTATTGTGCTTTGTTTTATGGGAGGTATCAAGACATTCTGATATGCATGGCCGGAGATGGAAACTAAACGAACATCATTCAAGTTACTTTGTATACACTATTAAACGAATCTGGTTTAAGATTGATCCAACAGCCTATGCCAGTTAAAGTGATGGGGTAACAAATATTTCAATTAGGCTCAGTTTTATTTACCGAGTCCCAGCTCTTTAAACCAAACCATTTTACTATGGTCGGTTTATAATAAAATGGGACCAATCTTTGTGGAGATTGAAGCAAATAAATCAGTCCTTGGTAACTCCAAATGCAGCTCTGGAAAGAGAAAAACAGCAGGAGTTTTGAAAATTGGCATAATAGCTTACAGAAGATCAAGATGGATGCTTAGCTCTTTTCTATTTTTGGTGTAAACAAGATATTAACTAGGACAGAAAATATCTTTGATGTGCTAGATTGTTCATAGGTAGCAGTTTAGACTAAGACTATTTTATTCGAGAAAATGGTTTAGAACCCCCCTAATTTATATCTGAAATCTCAACTACACACTTATTCATTACGAAAGTCCCATTACACTATTTTAAAGTAGAATTATTTGCTCCCTGGATGATAATGTGGCAAGGTAAGTGTAGGACACTCTCTCAAAGAGAGTGAGAGGTAAAAATACTAATTAAAACTTTAGATTTTAAAAATATTTCTTAAATTTATATTATAATTTTTTTATTCTTCAAAAATCTTTTGTTTCTTTTTTTAAAAAAATTATTTTTTATGGTCTTTCTTCTTCTCTTTACCAAAGCTACATCGGCGGCGGTTCTGCTCCACCACCAAGTCGGCGCCCTCACCGACTCTAATCATTAAGTTAACTCTTTTTTTTCAAATCACAAATTTCTCACAGTTAGTGTGAAAAATTGACAAGAACTGAAAATCGAAATCGAAAGTCAAGAGGATCGAACTTTAAAGTTATTAATGGAGAAAAATTCATCAAGTTACAGATCCATCGATGGAGAAGAACTCATCAACAAAATCATTAGGTAACAAACCCATTTATGAAAAAGACCCAATAATCGAAATGAGTTGCTGAACATTGTTAAATTCTAGCTTCAATACAAATCATCAAAAATTTTCTTGTGCTCATAACTCCAATGAGGCTCGAAGAAGATGGTGGCAGTCATATAAAGTATCTCCAAATCTGAAAAATTTGTTGTCGAGATTAAAGAAAAAGATGAATGGAAAAGGAAAGTGAATCAAAGAAGAAGAGGAATGGAAAAAGGAAAGTGAAAGAGAAAGATGAAAATATAGATGAAAAAATATTGCAGCATAAAGTTTTTTTGTTTTTTTTTAAAAAATGGTTAGATTACGTGGCTGAGCGCATGAGATTCATTATTTCATATAAATCTGGTTGTGTTTTTAAGGGGTATATATTTTACTTTTAAAATGTTCTGGGGGGTAATAGAACTCCCGTAATGAATAAGTGTGTAGTTGGAATATCGGGTATAGTAGATTAGGGGGGTTTTAGACCATTTTCTCATTTTATTCTGTTATTTGTAAAACTTTTGAAGGGGAACTACACTGTTGTTATAGTATACCTGTGGATATATAGACTAAAGTTATCAGTTTAAAAAAAAAAAAGATTCCTTGTAAGAGAAGCAAGGATGGTAGTTATTTTTGGGTCCTTAGATGTAACACTCATATATTTGGTTTCCAGAACAATCTTTGATGATTTATATACTGATCTTGTTATATTCTCAAAAAAGAAAAAAAATCAACTCTTCTCTGGTCTTCCAAGAATCATTTTGGGCATATTGGCTCTTGGATCCTACACTGATGCCTTCGTCTGCCTGCAAAGATTCTTGAAAACTGAGGCATTCTCATCTCTTTGTCCCCTTATGCTTGACTTTGCGCCTAAGCCCTGGAAAACCTAGTGTGTGTAGTACCTGTTCAGTTTATTAGCTTCTATCTACTCTTTGATGATTTATGTAGAGACTATCTGGTTGAAGCTCTGAAATAACCTTGGGTAGTCATCATCATCAGTATGAGAGTGTGAAACAATAAATGAGCTTTACATGTTTTGCCTGTATTTCCTTGTTTCAAAGCTTAATCCCTACTGAGTAATTCCTAGATCAAGTTCTGTAGCTGTGATAGATTCAAATCTATTTTTTTTTTTTAAAAAAAATCAAATATTCAAATCTATATGTTTGTGGTGATTCTTATCAGATGTTGGATGGCTCACAGACACTCTTATCCCGTGAAGAGCTCGAGAAAAAATTTGGTCAAGAAGGTTAGAACTAGTCTCATTTTCTGAGCTAGAGTTTGGGCATGCTGCATTTCTGTGGTTTTGCTTTCCTGCTACCCCTAGCTTTGCTGAATGTTAGACTTCATAAAAACAGTGAGCCATGTGTTAAAAAGGTATGTTGTATGTGGCACGTTTAGGCCTGAAGCTACCATGGAGCTCAGGTTGGGAACTTAAGTGCAAGATCGTCATTGCAAAACATCCATGTCATTGCCTATAGGCAATTAGAGACCCCCTTTAAAAGGACAACACTAGGCAATAAATATAGTCAGCAAAGTGGAGGCTTAATTATTAACAAAATGTTTTCTGTAGTGATTTGGGTGCTCTTTAATCCCCAAATCACTACAGAAAACATTTTGTTAATAATTAAATCTCCACTTTGCTGACAATATTTATTGCTTGAATAATTCTTGTATAACCATGGAATGTATGTTATTTGAAAATGTCCTTGCTCTTTAGGTAACTAATCTAACAGTACATGGTTCTTTCGCAGGTATCTCTTTGGACAAGCCTATAGTTGCCTCTTGTGGCACAGGTGTAACTGCTTGCGTACTTGTCTTGGTCAGTTGAATCCTCTCTCTCTCTCATACAGCTTTCGCTTGTACTGTTGTACATTAATCTATGCCCAGTATTCATATGGCTATTCCATCGTCTCAAAAGAGGGATGAATTCAAAGTTCATTTATCTTTTTAGGGCCTCCATCGACTGGGGAAGACTGACATTCCAGTCTATGATGGTTCATGGACAGAATGGGCAACACAGCCAGATACACCTCTCTGCACATCTGAAAGATGAAGACGTTTGTATGGCCTGCCTAGTTTTTATGGGTGAGCAATGATGATTGTGAATCTAGATCTGGTTCCTTTTCTTAATGGTTAGTGCAACAACTTACATTGTATTGTTGAATGATAACAACGGAAAAATTTCTTCTCTGTTGTACAAAATGCCTTAATTTTACCTTCATT</genome_strand>
        <mrna_strand>ATGGTGTTGCACCAGAGCCTCGAAAAGGAATTAACAGTGGACATGTACCCGGGAGCAAGTGTATTCCTTTTCCACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTGGATGGCTCACAGACACTCTTATCCCGTGAAGAGCTCGAGAAAAAATTTGGTCAAGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTTTGGACAAGCCTATAGTTGCCTCTTGTGGCACAGGTGTAACTGCTTGCGTACTTGTCTTG....................................................................................................................................GGCCTCCATCGACTGGGGAAGACTGACATTCCAGTCTATGATGGTTCATGGACAGAATGGGCAACACAGCCAGATACACCTCTCTGCACATCTGAAAGATGAAGACGTTTGTATGGCCTGCCTAGTTTTTATGGGTGAGCAATGATGATTGTGAATCTAGATCTGGTTCCTTTTCTTAATGGTTAGTGCAACAACTTACATTGTATTGTTGAATGATAACAACGGAAAAATTTCTTCTCTGTTGTACAAAATGCCTTAATTTTACCTTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>119</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="6435" PGL_stop="7009"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="6435" e_stop="7009"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="6435" e_stop="7009" e_length="575"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6435" stop="7009"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342749" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAACTTGGTCTTGACTCTTCTAATAAATGTGAATTTGTTAAATATCTTGAACAGGGTACAGATGATATTACAAACGATAATGGTATATCGGAACTATTGAACTGGTGGAGGAATCGTGGAGCTCAATATCCAAAACTTAGTAGGATGGTGAAGGATGTGCTTGCAATTCAAGGATCATCAGTAGCTTCGGAGGCAGCTTTCAGCGCGACAAGATTTCAAATTGGAGACCACAGATATTCGTTAGCAGAACACACCCTGGAGATATCAGTGTTATTTAGAGACTGGATAAATGCTGAGCGTAGAAATCAAGGACTTCCAAAGTTAGATAGTCAATTTGAACTTTTCATAGATTCAGCTATTGGATATGGTAGTGATGATGGCATCGAAATTCAAGATCGTCAACGAGCTTTACCAAGACCAGAAGTTGATCACAATCAATCCATAGCTGAGTTAGAAAGAGGATTTACGGGACTATACAACTATTAATATTACATTCGAGACATAGTTGAAACAGAACCCTTCCTAGAAGGTGGCTGCGTAAGCTATGTACTCTACTAATAGTTGTAAATTGAAAT</gDNA_template>
            <first_frame> K  L  G  L  D  S  S  N  K  C  E  F  V  K  Y  L  E  Q  G  T  D  D  I  T  N  D  N  G  I  S  E  L  L  N  W  W  R  N  R  G  A  Q  Y  P  K  L  S  R  M  V  K  D  V  L  A  I  Q  G  S  S  V  A  S  E  A  A  F  S  A  T  R  F  Q  I  G  D  H  R  Y  S  L  A  E  H  T  L  E  I  S  V  L  F  R  D  W  I  N  A  E  R  R  N  Q  G  L  P  K  L  D  S  Q  F  E  L  F  I  D  S  A  I  G  Y  G  S  D  D  G  I  E  I  Q  D  R  Q  R  A  L  P  R  P  E  V  D  H  N  Q  S  I  A  E  L  E  R  G  F  T  G  L  Y  N  Y  *  Y  Y  I  R  D  I  V  E  T  E  P  F  L  E  G  G  C  V  S  Y  V  L  Y  *  *  L  *  I  E   </first_frame>
            <second_frame>  N  L  V  L  T  L  L  I  N  V  N  L  L  N  I  L  N  R  V  Q  M  I  L  Q  T  I  M  V  Y  R  N  Y  *  T  G  G  G  I  V  E  L  N  I  Q  N  L  V  G  W  *  R  M  C  L  Q  F  K  D  H  Q  *  L  R  R  Q  L  S  A  R  Q  D  F  K  L  E  T  T  D  I  R  *  Q  N  T  P  W  R  Y  Q  C  Y  L  E  T  G  *  M  L  S  V  E  I  K  D  F  Q  S  *  I  V  N  L  N  F  S  *  I  Q  L  L  D  M  V  V  M  M  A  S  K  F  K  I  V  N  E  L  Y  Q  D  Q  K  L  I  T  I  N  P  *  L  S  *  K  E  D  L  R  D  Y  T  T  I  N  I  T  F  E  T  *  L  K  Q  N  P  S  *  K  V  A  A  *  A  M  Y  S  T  N  S  C  K  L  K  </second_frame>
            <third_frame>   T  W  S  *  L  F  *  *  M  *  I  C  *  I  S  *  T  G  Y  R  *  Y  Y  K  R  *  W  Y  I  G  T  I  E  L  V  E  E  S  W  S  S  I  S  K  T  *  *  D  G  E  G  C  A  C  N  S  R  I  I  S  S  F  G  G  S  F  Q  R  D  K  I  S  N  W  R  P  Q  I  F  V  S  R  T  H  P  G  D  I  S  V  I  *  R  L  D  K  C  *  A  *  K  S  R  T  S  K  V  R  *  S  I  *  T  F  H  R  F  S  Y  W  I  W  *  *  *  W  H  R  N  S  R  S  S  T  S  F  T  K  T  R  S  *  S  Q  S  I  H  S  *  V  R  K  R  I  Y  G  T  I  Q  L  L  I  L  H  S  R  H  S  *  N  R  T  L  P  R  R  W  L  R  K  L  C  T  L  L  I  V  V  N  *  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6435" stop="6920"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>483</number_coding_nucleotides>
                  <number_encoded_amino_acids>161</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLGLDSSNKCEFVKYLEQGTDDITNDNGISELLNWWRNRGAQYPKLSRMVKDVLAIQGSSVASEAAFSATRFQIGDHRYSLAEHTLEISVLFRDWINAERRNQGLPKLDSQFELFIDSAIGYGSDDGIEIQDRQRALPRPEVDHNQSIAELERGFTGLYNY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="19229" PGL_stop="16809"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19229" e_stop="19073"/>
            <exon e_start="18970" e_stop="18908"/>
            <exon e_start="18420" e_stop="18365"/>
            <exon e_start="18184" e_stop="18104"/>
            <exon e_start="18022" e_stop="17949"/>
            <exon e_start="17795" e_stop="17713"/>
            <exon e_start="17245" e_stop="17139"/>
            <exon e_start="16865" e_stop="16809"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.672" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.911" acc_prob="0.686" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.634" e_score="0.976"/>
          <exon-intron don_prob="1.000" acc_prob="0.447" e_score="1.000"/>
          <exon-only e_score="0.947"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="19229" e_stop="19073" e_length="157"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.971">
            <gDNA_intron_boundary i_start="19072" i_stop="18971" i_length="102"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="18970" e_stop="18908" e_length="63"/>
          </exon>
          <intron i_serial="2" don_prob="0.672" acc_prob="0.994">
            <gDNA_intron_boundary i_start="18907" i_stop="18421" i_length="487"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="18420" e_stop="18365" e_length="56"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="18364" i_stop="18185" i_length="180"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18184" e_stop="18104" e_length="81"/>
          </exon>
          <intron i_serial="4" don_prob="0.911" acc_prob="0.686">
            <gDNA_intron_boundary i_start="18103" i_stop="18023" i_length="81"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="18022" e_stop="17949" e_length="74"/>
          </exon>
          <intron i_serial="5" don_prob="0.985" acc_prob="0.996">
            <gDNA_intron_boundary i_start="17948" i_stop="17796" i_length="153"/>
          </intron>
          <exon e_serial="6" e_score="0.976">
            <gDNA_exon_boundary e_start="17795" e_stop="17713" e_length="83"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.634">
            <gDNA_intron_boundary i_start="17712" i_stop="17246" i_length="467"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="17245" e_stop="17139" e_length="107"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.447">
            <gDNA_intron_boundary i_start="17138" i_stop="16866" i_length="273"/>
          </intron>
          <exon e_serial="8" e_score="0.947">
            <gDNA_exon_boundary e_start="16865" e_stop="16809" e_length="57"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19229" stop="19073"/>
              <exon start="18970" stop="18908"/>
              <exon start="18420" stop="18365"/>
              <exon start="18184" stop="18104"/>
              <exon start="18022" stop="17949"/>
              <exon start="17795" stop="17769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238443" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19171" stop="19073"/>
              <exon start="18970" stop="18908"/>
              <exon start="18420" stop="18365"/>
              <exon start="18184" stop="18104"/>
              <exon start="18022" stop="17949"/>
              <exon start="17795" stop="17713"/>
              <exon start="17245" stop="17139"/>
              <exon start="16865" stop="16809"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367164" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGGAAACCCCTATTGAAGCTGTAGAAGAGAAACCATCGGAAGAACCTTACCCTTGGCCGGTTATTCAGTATGATGTTCCGCCGTATCTAACCTATCATTTCTTCAATCAGTTCAGGACGCCTTCAAACCCTAATAATTTCTTAAAGGGTGTCAAATG : GTCTCCTGATGGTTCTGGTTTCCTCACTTGCTCTGATGATAATACCTTTTGTTTATATAACTT : GCCATATGATGAAAGTGGACAGCTTGCTGATTTTTCCTCATCAGCTGCTGATACAG : ATTCGTATGCTGCAAGTCTTGTCATGAGTGACGGGGAGTCTGTATATGACTATTGCTGGTATCCCTATATGTCTTCTTCAA : GTCCAGAGACATGTGTTTTTGCAAGTACTACCCGTGATCACCCTATTCATCTCTGGGATGCTACTACTGGACAG : TTACGTTGTACATACCGTGCTTATGATGCCATGGACGAGATCACTGCTGCCTTTTCAATTGCCTTCAATCCCGCAGGGACTAA : GATATTTGCTGGTTACAACAAATCCATAAGAATATTTGATATTCATCGGCCTGGCAGAGATTTTACCCAGCACTCCACCCTTCAAGGAAATAAAGAAGGGCAATCAG : GAATTATATCCTCAATGGCTTTCTGTCCAAGCCATTCAGGGTTATTGGCAACTGGCT</gDNA_template>
            <first_frame> R  K  P  L  L  K  L  *  K  R  N  H  R  K  N  L  T  L  G  R  L  F  S  M  M  F  R  R  I  *  P  I  I  S  S  I  S  S  G  R  L  Q  T  L  I  I  S  *  R  V  S  N   : G  L  L  M  V  L  V  S  S  L  A  L  M  I  I  P  F  V  Y  I  T   : C  H  M  M  K  V  D  S  L  L  I  F  P  H  Q  L  L  I  Q  :  I  R  M  L  Q  V  L  S  *  V  T  G  S  L  Y  M  T  I  A  G  I  P  I  C  L  L  Q  :  V  Q  R  H  V  F  L  Q  V  L  P  V  I  T  L  F  I  S  G  M  L  L  L  D  S :   Y  V  V  H  T  V  L  M  M  P  W  T  R  S  L  L  P  F  Q  L  P  S  I  P  Q  G  L   : R  Y  L  L  V  T  T  N  P  *  E  Y  L  I  F  I  G  L  A  E  I  L  P  S  T  P  P  F  K  E  I  K  K  G  N  Q  :  E  L  Y  P  Q  W  L  S  V  Q  A  I  Q  G  Y  W  Q  L  A </first_frame>
            <second_frame>  G  N  P  Y  *  S  C  R  R  E  T  I  G  R  T  L  P  L  A  G  Y  S  V  *  C  S  A  V  S  N  L  S  F  L  Q  S  V  Q  D  A  F  K  P  *  *  F  L  K  G  C  Q  M  :  V  S  *  W  F  W  F  P  H  L  L  *  *  *  Y  L  L  F  I  *  L  :  A  I  *  *  K  W  T  A  C  *  F  F  L  I  S  C  *  Y  R :   F  V  C  C  K  S  C  H  E  *  R  G  V  C  I  *  L  L  L  V  S  L  Y  V  F  F  K :   S  R  D  M  C  F  C  K  Y  Y  P  *  S  P  Y  S  S  L  G  C  Y  Y  W  T   : V  T  L  Y  I  P  C  L  *  C  H  G  R  D  H  C  C  L  F  N  C  L  Q  S  R  R  D  *  :  D  I  C  W  L  Q  Q  I  H  K  N  I  *  Y  S  S  A  W  Q  R  F  Y  P  A  L  H  P  S  R  K  *  R  R  A  I  R :   N  Y  I  L  N  G  F  L  S  K  P  F  R  V  I  G  N  W   </second_frame>
            <third_frame>   E  T  P  I  E  A  V  E  E  K  P  S  E  E  P  Y  P  W  P  V  I  Q  Y  D  V  P  P  Y  L  T  Y  H  F  F  N  Q  F  R  T  P  S  N  P  N  N  F  L  K  G  V  K  W :   S  P  D  G  S  G  F  L  T  C  S  D  D  N  T  F  C  L  Y  N  L :   P  Y  D  E  S  G  Q  L  A  D  F  S  S  S  A  A  D  T   : D  S  Y  A  A  S  L  V  M  S  D  G  E  S  V  Y  D  Y  C  W  Y  P  Y  M  S  S  S   : S  P  E  T  C  V  F  A  S  T  T  R  D  H  P  I  H  L  W  D  A  T  T  G  Q  :  L  R  C  T  Y  R  A  Y  D  A  M  D  E  I  T  A  A  F  S  I  A  F  N  P  A  G  T  K :   I  F  A  G  Y  N  K  S  I  R  I  F  D  I  H  R  P  G  R  D  F  T  Q  H  S  T  L  Q  G  N  K  E  G  Q  S   : G  I  I  S  S  M  A  F  C  P  S  H  S  G  L  L  A  T  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19227" stop="19073"/>
                    <exon start="18970" stop="18908"/>
                    <exon start="18420" stop="18365"/>
                    <exon start="18184" stop="18104"/>
                    <exon start="18022" stop="17949"/>
                    <exon start="17795" stop="17713"/>
                    <exon start="17245" stop="17139"/>
                    <exon start="16865" stop="16810"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>675</number_coding_nucleotides>
                  <number_encoded_amino_acids>225</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ETPIEAVEEKPSEEPYPWPVIQYDVPPYLTYHFFNQFRTPSNPNNFLKGVKWSPDGSGFLTCSDDNTFCLYNLPYDESGQLADFSSSAADTDSYAASLVMSDGESVYDYCWYPYMSSSSPETCVFASTTRDHPIHLWDATTGQLRCTYRAYDAMDEITAAFSIAFNPAGTKIFAGYNKSIRIFDIHRPGRDFTQHSTLQGNKEGQSGIISSMAFCPSHSGLLATG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="24731" PGL_stop="19731"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24712" e_stop="24647"/>
            <exon e_start="24008" e_stop="23920"/>
            <exon e_start="23322" e_stop="23136"/>
            <exon e_start="22223" e_stop="22093"/>
            <exon e_start="21965" e_stop="21896"/>
            <exon e_start="21804" e_stop="21739"/>
            <exon e_start="21190" e_stop="21036"/>
            <exon e_start="20950" e_stop="20855"/>
            <exon e_start="20576" e_stop="20425"/>
            <exon e_start="20347" e_stop="20264"/>
            <exon e_start="20188" e_stop="19766"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.764" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.602" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.686" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.903" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.877" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.872"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24712" e_stop="24647" e_length="66"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.976">
            <gDNA_intron_boundary i_start="24646" i_stop="24009" i_length="638"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24008" e_stop="23920" e_length="89"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.967">
            <gDNA_intron_boundary i_start="23919" i_stop="23323" i_length="597"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="23322" e_stop="23136" e_length="187"/>
          </exon>
          <intron i_serial="3" don_prob="0.764" acc_prob="0.996">
            <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="22223" e_stop="22093" e_length="131"/>
          </exon>
          <intron i_serial="4" don_prob="0.602" acc_prob="0.991">
            <gDNA_intron_boundary i_start="22092" i_stop="21966" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="21965" e_stop="21896" e_length="70"/>
          </exon>
          <intron i_serial="5" don_prob="0.968" acc_prob="0.686">
            <gDNA_intron_boundary i_start="21895" i_stop="21805" i_length="91"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="21804" e_stop="21739" e_length="66"/>
          </exon>
          <intron i_serial="6" don_prob="0.991" acc_prob="0.000">
            <gDNA_intron_boundary i_start="21738" i_stop="21191" i_length="548"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="21190" e_stop="21036" e_length="155"/>
          </exon>
          <intron i_serial="7" don_prob="0.903" acc_prob="0.905">
            <gDNA_intron_boundary i_start="21035" i_stop="20951" i_length="85"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="20950" e_stop="20855" e_length="96"/>
          </exon>
          <intron i_serial="8" don_prob="0.999" acc_prob="0.935">
            <gDNA_intron_boundary i_start="20854" i_stop="20577" i_length="278"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="20576" e_stop="20425" e_length="152"/>
          </exon>
          <intron i_serial="9" don_prob="0.877" acc_prob="0.958">
            <gDNA_intron_boundary i_start="20424" i_stop="20348" i_length="77"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="20347" e_stop="20264" e_length="84"/>
          </exon>
          <intron i_serial="10" don_prob="0.987" acc_prob="0.999">
            <gDNA_intron_boundary i_start="20263" i_stop="20189" i_length="75"/>
          </intron>
          <exon e_serial="11" e_score="0.872">
            <gDNA_exon_boundary e_start="20188" e_stop="19766" e_length="423"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24712" stop="24647"/>
              <exon start="24008" stop="23920"/>
              <exon start="23322" stop="23306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313806" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24708" stop="24647"/>
              <exon start="24008" stop="23920"/>
              <exon start="23322" stop="23136"/>
              <exon start="22223" stop="22093"/>
              <exon start="21965" stop="21910"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24700" stop="24647"/>
              <exon start="24008" stop="23920"/>
              <exon start="23322" stop="23136"/>
              <exon start="22223" stop="22093"/>
              <exon start="21965" stop="21932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24696" stop="24647"/>
              <exon start="24008" stop="23920"/>
              <exon start="23322" stop="23136"/>
              <exon start="22223" stop="22093"/>
              <exon start="21965" stop="21911"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688590" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24695" stop="24647"/>
              <exon start="24008" stop="23920"/>
              <exon start="23322" stop="23136"/>
              <exon start="22223" stop="22093"/>
              <exon start="21965" stop="21896"/>
              <exon start="21804" stop="21739"/>
              <exon start="21190" stop="21103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252181" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24695" stop="24647"/>
              <exon start="24008" stop="23920"/>
              <exon start="23322" stop="23136"/>
              <exon start="22223" stop="22093"/>
              <exon start="21965" stop="21896"/>
              <exon start="21804" stop="21770"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24695" stop="24647"/>
              <exon start="24008" stop="23920"/>
              <exon start="23322" stop="23136"/>
              <exon start="22223" stop="22093"/>
              <exon start="21965" stop="21942"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24693" stop="24647"/>
              <exon start="24008" stop="23920"/>
              <exon start="23322" stop="23136"/>
              <exon start="22223" stop="22093"/>
              <exon start="21965" stop="21909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550858" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23260" stop="23136"/>
              <exon start="22223" stop="22093"/>
              <exon start="21965" stop="21896"/>
              <exon start="21804" stop="21739"/>
              <exon start="21190" stop="21036"/>
              <exon start="20950" stop="20855"/>
              <exon start="20576" stop="20425"/>
              <exon start="20347" stop="20274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23257" stop="23136"/>
              <exon start="22223" stop="22093"/>
              <exon start="21965" stop="21896"/>
              <exon start="21804" stop="21739"/>
              <exon start="21190" stop="21046"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21965" stop="21896"/>
              <exon start="21804" stop="21739"/>
              <exon start="21190" stop="21036"/>
              <exon start="20950" stop="20946"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20549" stop="20425"/>
              <exon start="20347" stop="20264"/>
              <exon start="20188" stop="19766"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E692174" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACAACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT : ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG : ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA : GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG : GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT : ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT : ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA : GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAG : CTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTT : GAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACATACGGCCGGAG : GCCAACTTTTCGTCACTTGAAGCCTTGATAGCAAAAATTCACGAGGACAGGAAGATTGCAGAAAGAGCTCTCGAACTTCCTCAATACTTGAAGTACAAGGACGATCCATACCTTAAAAGTTCTCTGCATCAACAAAATTGATCATTGAAGTGTTGAAGTTCATTATTGTTCTGATTGGGATTGTATCTGTTTATTCTGTCCTAATTCCTCAGACTACAATAGTCTCCCCATCAAAATGCTCTATACAATAAAAAGATAAAAAGAATTTGAATGTATAGCTATTCAGAAGTTAAAGAACCTTCCAGGGGGTATTAGTGAATGGCAAAGGGTTCAAGTGCAGGATCTTTGTACTGAGAATTTCAAGTTCCTGTGTAAATGTTGATTAATGTAACTTGTTTTCTATCTGTTTATAATATGGAAACA</gDNA_template>
            <first_frame> N  N  Q  E  K  V  E  V  L  H  L  L  S  S  I  I  N  W  *  S  W  I  :  I  I  A  L  H  V  C  *  T  N  F  Q  E  A  S  F  W  C  H  P  *  F  G  W  Y  T  S  *  Y  R :   W  H  C  E  *  D  F  K  G  F  L  S  *  V  W  K  A  M  G  W  E  R  S  S  P  H  S  R  E  N  P  N  R  S  C  C  C  R  C  *  R  L  W  A  A  T  V  K  R  *  I  S  F  A  I  L  P  N  A  V  *  S  :  V  A  Q  Y  Q  S  S  S  R  G  Q  S  I  D  *  P  F  E  R  S  W  C  T  H  G  I  G  V  K  F  F  *  I  *  H  *  G  Q  N  F  S  S  C  R :   M  E  R  V  L  L  S  Y  C  W  R  R  *  S  E  S  W  K  A  V  S  G  N  :  I  S  *  S  S  *  K  T  Q  H  G  S  I  Q  L  S  C  H  *  R  F  N  :  T  R  C  Y  C  W  *  R  C  W  N  G  S  S  C  C  T  I  S  C  K  A  V  S  S  L  Y  L  C  *  *  S  D  Q  F  S  S  R  F  A  T  R  K  V  G  T  T  C  I  S  R  * :   D  R  R  Y  F  A  F  R  T  L  V  Y  R  W  S  C  H  *  G  I  W  A  R  L  K  G  S  R  D  P  H  S :   *  F  I  P  T  R  L  F  S  H  S  F  R  T  S  S  G  C  I  F  W  M  G  R  T  I  R  S  R  C  L  Q  D  G  H  E  H  W  L  E  S  F  L  Q  Q  Y  R  E  D  G   : *  T  M  V  A  S  *  L  Q  *  G  L  L  W  *  G  I  A  S  S  C  C  G  L  H  T  A  G   : G  Q  L  F  V  T  *  S  L  D  S  K  N  S  R  G  Q  E  D  C  R  K  S  S  R  T  S  S  I  L  E  V  Q  G  R  S  I  P  *  K  F  S  A  S  T  K  L  I  I  E  V  L  K  F  I  I  V  L  I  G  I  V  S  V  Y  S  V  L  I  P  Q  T  T  I  V  S  P  S  K  C  S  I  Q  *  K  D  K  K  N  L  N  V  *  L  F  R  S  *  R  T  F  Q  G  V  L  V  N  G  K  G  F  K  C  R  I  F  V  L  R  I  S  S  S  C  V  N  V  D  *  C  N  L  F  S  I  C  L  *  Y  G  N  </first_frame>
            <second_frame>  T  T  K  K  K  L  K  C  F  I  F  S  V  Q  *  S  I  G  E  V  G  L :   *  L  L  S  M  S  V  E  R  T  F  K  K  L  V  S  G  V  I  L  D  L  D  G  T  L  L  N  T   : D  G  I  V  S  E  I  L  K  V  F  L  V  K  Y  G  K  Q  W  D  G  R  E  A  P  H  I  V  G  K  T  P  T  E  A  A  A  A  V  V  E  D  Y  G  L  P  L  S  R  D  E  F  L  S  Q  F  Y  P  M  L  S  D  Q :   W  R  N  I  K  A  L  P  G  A  N  R  L  I  N  H  L  S  G  H  G  V  P  M  A  L  A  S  N  S  S  K  S  N  I  E  A  K  I  F  H  H  A   : G  W  K  E  S  F  S  A  I  V  G  G  D  E  V  K  A  G  K  P  S  P  E  I :   F  L  E  A  A  K  R  L  N  M  D  P  S  S  F  L  V  I  E  D  S  I :   P  G  V  T  A  G  K  D  A  G  M  A  V  V  A  V  P  S  L  A  K  Q  S  H  L  Y  T  S  A  D  E  V  I  N  S  L  L  D  L  Q  L  E  K  W  G  L  P  A  F  Q  D   : R  I  E  G  T  L  P  L  E  P  W  Y  I  G  G  P  V  I  K  G  F  G  R  G  S  K  V  L  G  I  P  T   : A  N  L  S  P  Q  G  Y  S  A  I  L  S  E  H  P  A  G  V  Y  F  G  W  A  G  L  S  G  R  G  V  Y  K  M  V  M  S  I  G  W  N  P  F  F  N  N  T  E  K  T  V  :  E  P  W  L  L  H  D  F  N  E  D  F  Y  G  E  E  L  H  L  V  V  V  G  Y  I  R  P  E  :  A  N  F  S  S  L  E  A  L  I  A  K  I  H  E  D  R  K  I  A  E  R  A  L  E  L  P  Q  Y  L  K  Y  K  D  D  P  Y  L  K  S  S  L  H  Q  Q  N  *  S  L  K  C  *  S  S  L  L  F  *  L  G  L  Y  L  F  I  L  S  *  F  L  R  L  Q  *  S  P  H  Q  N  A  L  Y  N  K  K  I  K  R  I  *  M  Y  S  Y  S  E  V  K  E  P  S  R  G  Y  *  *  M  A  K  G  S  S  A  G  S  L  Y  *  E  F  Q  V  P  V  *  M  L  I  N  V  T  C  F  L  S  V  Y  N  M  E  T </second_frame>
            <third_frame>   Q  P  R  K  S  *  S  A  S  S  S  Q  F  N  N  Q  L  V  K  L  D   : Y  N  C  S  P  C  L  L  N  E  L  S  R  S  *  F  L  V  S  S  L  I  W  M  V  H  F  L  I  Q  :  M  A  L  *  V  R  F  *  R  F  S  *  L  S  M  E  S  N  G  M  G  E  K  L  P  T  *  *  G  K  P  Q  Q  K  L  L  L  P  L  L  K  I  M  G  C  H  C  Q  E  M  N  F  F  R  N  F  T  Q  C  C  L  I   : S  G  A  I  S  K  L  F  Q  G  P  I  D  *  L  T  I  *  A  V  M  V  Y  P  W  H  W  R  Q  I  L  L  N  L  T  L  R  P  K  F  F  I  M  Q  :  D  G  K  S  P  S  Q  L  L  L  E  E  M  K  *  K  L  E  S  R  L  R  K   : Y  F  L  K  Q  L  K  D  S  T  W  I  H  P  A  F  L  S  L  K  I  Q   : Y  Q  V  L  L  L  V  K  M  L  E  W  Q  *  L  L  Y  H  L  L  Q  S  S  L  I  F  I  P  L  L  M  K  *  S  I  L  F  *  I  C  N  *  K  S  G  D  Y  L  H  F  K  I  :  G  *  K  V  L  C  L  *  N  L  G  I  *  V  V  L  S  L  R  D  L  G  A  A  Q  R  F  S  G  S  P  Q  :  L  I  Y  P  H  K  V  I  Q  P  F  F  Q  N  I  Q  R  V  Y  I  L  D  G  Q  D  Y  Q  V  E  V  S  T  R  W  S  *  A  L  V  G  I  L  S  S  T  I  Q  R  R  R  L :   N  H  G  C  F  M  T  S  M  R  T  S  M  V  R  N  C  I  *  L  L  W  A  T  Y  G  R  R :   P  T  F  R  H  L  K  P  *  *  Q  K  F  T  R  T  G  R  L  Q  K  E  L  S  N  F  L  N  T  *  S  T  R  T  I  H  T  L  K  V  L  C  I  N  K  I  D  H  *  S  V  E  V  H  Y  C  S  D  W  D  C  I  C  L  F  C  P  N  S  S  D  Y  N  S  L  P  I  K  M  L  Y  T  I  K  R  *  K  E  F  E  C  I  A  I  Q  K  L  K  N  L  P  G  G  I  S  E  W  Q  R  V  Q  V  Q  D  L  C  T  E  N  F  K  F  L  C  K  C  *  L  M  *  L  V  F  Y  L  F  I  I  W  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24004" stop="23920"/>
                    <exon start="23322" stop="23136"/>
                    <exon start="22223" stop="22093"/>
                    <exon start="21965" stop="21896"/>
                    <exon start="21804" stop="21739"/>
                    <exon start="21190" stop="21036"/>
                    <exon start="20950" stop="20855"/>
                    <exon start="20576" stop="20425"/>
                    <exon start="20347" stop="20264"/>
                    <exon start="20188" stop="20048"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1164</number_coding_nucleotides>
                  <number_encoded_amino_acids>388</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLSMSVERTFKKLVSGVILDLDGTLLNTDGIVSEILKVFLVKYGKQWDGREAPHIVGKTPTEAAAAVVEDYGLPLSRDEFLSQFYPMLSDQWRNIKALPGANRLINHLSGHGVPMALASNSSKSNIEAKIFHHAGWKESFSAIVGGDEVKAGKPSPEIFLEAAKRLNMDPSSFLVIEDSIPGVTAGKDAGMAVVAVPSLAKQSHLYTSADEVINSLLDLQLEKWGLPAFQDRIEGTLPLEPWYIGGPVIKGFGRGSKVLGIPTANLSPQGYSAILSEHPAGVYFGWAGLSGRGVYKMVMSIGWNPFFNNTEKTVEPWLLHDFNEDFYGEELHLVVVGYIRPEANFSSLEALIAKIHEDRKIAERALELPQYLKYKDDPYLKSSLHQQN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="23331" e_stop="23136"/>
            <exon e_start="22223" e_stop="22093"/>
            <exon e_start="21965" e_stop="21896"/>
            <exon e_start="21804" e_stop="21739"/>
            <exon e_start="21190" e_stop="21036"/>
            <exon e_start="20950" e_stop="20855"/>
            <exon e_start="20576" e_stop="20425"/>
            <exon e_start="20347" e_stop="20264"/>
            <exon e_start="20188" e_stop="19766"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.764" acc_prob="0.996" e_score="0.969"/>
          <exon-intron don_prob="0.602" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.686" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.903" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.877" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.872"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="23331" e_stop="23136" e_length="196"/>
          </exon>
          <intron i_serial="1" don_prob="0.764" acc_prob="0.996">
            <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="22223" e_stop="22093" e_length="131"/>
          </exon>
          <intron i_serial="2" don_prob="0.602" acc_prob="0.991">
            <gDNA_intron_boundary i_start="22092" i_stop="21966" i_length="127"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="21965" e_stop="21896" e_length="70"/>
          </exon>
          <intron i_serial="3" don_prob="0.968" acc_prob="0.686">
            <gDNA_intron_boundary i_start="21895" i_stop="21805" i_length="91"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="21804" e_stop="21739" e_length="66"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.000">
            <gDNA_intron_boundary i_start="21738" i_stop="21191" i_length="548"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="21190" e_stop="21036" e_length="155"/>
          </exon>
          <intron i_serial="5" don_prob="0.903" acc_prob="0.905">
            <gDNA_intron_boundary i_start="21035" i_stop="20951" i_length="85"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="20950" e_stop="20855" e_length="96"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.935">
            <gDNA_intron_boundary i_start="20854" i_stop="20577" i_length="278"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="20576" e_stop="20425" e_length="152"/>
          </exon>
          <intron i_serial="7" don_prob="0.877" acc_prob="0.958">
            <gDNA_intron_boundary i_start="20424" i_stop="20348" i_length="77"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="20347" e_stop="20264" e_length="84"/>
          </exon>
          <intron i_serial="8" don_prob="0.987" acc_prob="0.999">
            <gDNA_intron_boundary i_start="20263" i_stop="20189" i_length="75"/>
          </intron>
          <exon e_serial="9" e_score="0.872">
            <gDNA_exon_boundary e_start="20188" e_stop="19766" e_length="423"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23331" stop="23136"/>
              <exon start="22223" stop="22116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273774" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23260" stop="23136"/>
              <exon start="22223" stop="22093"/>
              <exon start="21965" stop="21896"/>
              <exon start="21804" stop="21739"/>
              <exon start="21190" stop="21036"/>
              <exon start="20950" stop="20855"/>
              <exon start="20576" stop="20425"/>
              <exon start="20347" stop="20274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23257" stop="23136"/>
              <exon start="22223" stop="22093"/>
              <exon start="21965" stop="21896"/>
              <exon start="21804" stop="21739"/>
              <exon start="21190" stop="21046"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21965" stop="21896"/>
              <exon start="21804" stop="21739"/>
              <exon start="21190" stop="21036"/>
              <exon start="20950" stop="20946"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20549" stop="20425"/>
              <exon start="20347" stop="20264"/>
              <exon start="20188" stop="19766"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E692174" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA : GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG : GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT : ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT : ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA : GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAG : CTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTT : GAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACATACGGCCGGAG : GCCAACTTTTCGTCACTTGAAGCCTTGATAGCAAAAATTCACGAGGACAGGAAGATTGCAGAAAGAGCTCTCGAACTTCCTCAATACTTGAAGTACAAGGACGATCCATACCTTAAAAGTTCTCTGCATCAACAAAATTGATCATTGAAGTGTTGAAGTTCATTATTGTTCTGATTGGGATTGTATCTGTTTATTCTGTCCTAATTCCTCAGACTACAATAGTCTCCCCATCAAAATGCTCTATACAATAAAAAGATAAAAAGAATTTGAATGTATAGCTATTCAGAAGTTAAAGAACCTTCCAGGGGGTATTAGTGAATGGCAAAGGGTTCAAGTGCAGGATCTTTGTACTGAGAATTTCAAGTTCCTGTGTAAATGTTGATTAATGTAACTTGTTTTCTATCTGTTTATAATATGGAAACA</gDNA_template>
            <first_frame> F  *  Q  M  A  L  *  V  R  F  *  R  F  S  *  L  S  M  E  S  N  G  M  G  E  K  L  P  T  *  *  G  K  P  Q  Q  K  L  L  L  P  L  L  K  I  M  G  C  H  C  Q  E  M  N  F  F  R  N  F  T  Q  C  C  L  I   : S  G  A  I  S  K  L  F  Q  G  P  I  D  *  L  T  I  *  A  V  M  V  Y  P  W  H  W  R  Q  I  L  L  N  L  T  L  R  P  K  F  F  I  M  Q  :  D  G  K  S  P  S  Q  L  L  L  E  E  M  K  *  K  L  E  S  R  L  R  K   : Y  F  L  K  Q  L  K  D  S  T  W  I  H  P  A  F  L  S  L  K  I  Q   : Y  Q  V  L  L  L  V  K  M  L  E  W  Q  *  L  L  Y  H  L  L  Q  S  S  L  I  F  I  P  L  L  M  K  *  S  I  L  F  *  I  C  N  *  K  S  G  D  Y  L  H  F  K  I  :  G  *  K  V  L  C  L  *  N  L  G  I  *  V  V  L  S  L  R  D  L  G  A  A  Q  R  F  S  G  S  P  Q  :  L  I  Y  P  H  K  V  I  Q  P  F  F  Q  N  I  Q  R  V  Y  I  L  D  G  Q  D  Y  Q  V  E  V  S  T  R  W  S  *  A  L  V  G  I  L  S  S  T  I  Q  R  R  R  L :   N  H  G  C  F  M  T  S  M  R  T  S  M  V  R  N  C  I  *  L  L  W  A  T  Y  G  R  R :   P  T  F  R  H  L  K  P  *  *  Q  K  F  T  R  T  G  R  L  Q  K  E  L  S  N  F  L  N  T  *  S  T  R  T  I  H  T  L  K  V  L  C  I  N  K  I  D  H  *  S  V  E  V  H  Y  C  S  D  W  D  C  I  C  L  F  C  P  N  S  S  D  Y  N  S  L  P  I  K  M  L  Y  T  I  K  R  *  K  E  F  E  C  I  A  I  Q  K  L  K  N  L  P  G  G  I  S  E  W  Q  R  V  Q  V  Q  D  L  C  T  E  N  F  K  F  L  C  K  C  *  L  M  *  L  V  F  Y  L  F  I  I  W  K   </first_frame>
            <second_frame>  S  D  R  W  H  C  E  *  D  F  K  G  F  L  S  *  V  W  K  A  M  G  W  E  R  S  S  P  H  S  R  E  N  P  N  R  S  C  C  C  R  C  *  R  L  W  A  A  T  V  K  R  *  I  S  F  A  I  L  P  N  A  V  *  S  :  V  A  Q  Y  Q  S  S  S  R  G  Q  S  I  D  *  P  F  E  R  S  W  C  T  H  G  I  G  V  K  F  F  *  I  *  H  *  G  Q  N  F  S  S  C  R :   M  E  R  V  L  L  S  Y  C  W  R  R  *  S  E  S  W  K  A  V  S  G  N  :  I  S  *  S  S  *  K  T  Q  H  G  S  I  Q  L  S  C  H  *  R  F  N  :  T  R  C  Y  C  W  *  R  C  W  N  G  S  S  C  C  T  I  S  C  K  A  V  S  S  L  Y  L  C  *  *  S  D  Q  F  S  S  R  F  A  T  R  K  V  G  T  T  C  I  S  R  * :   D  R  R  Y  F  A  F  R  T  L  V  Y  R  W  S  C  H  *  G  I  W  A  R  L  K  G  S  R  D  P  H  S :   *  F  I  P  T  R  L  F  S  H  S  F  R  T  S  S  G  C  I  F  W  M  G  R  T  I  R  S  R  C  L  Q  D  G  H  E  H  W  L  E  S  F  L  Q  Q  Y  R  E  D  G   : *  T  M  V  A  S  *  L  Q  *  G  L  L  W  *  G  I  A  S  S  C  C  G  L  H  T  A  G   : G  Q  L  F  V  T  *  S  L  D  S  K  N  S  R  G  Q  E  D  C  R  K  S  S  R  T  S  S  I  L  E  V  Q  G  R  S  I  P  *  K  F  S  A  S  T  K  L  I  I  E  V  L  K  F  I  I  V  L  I  G  I  V  S  V  Y  S  V  L  I  P  Q  T  T  I  V  S  P  S  K  C  S  I  Q  *  K  D  K  K  N  L  N  V  *  L  F  R  S  *  R  T  F  Q  G  V  L  V  N  G  K  G  F  K  C  R  I  F  V  L  R  I  S  S  S  C  V  N  V  D  *  C  N  L  F  S  I  C  L  *  Y  G  N  </second_frame>
            <third_frame>   L  T  D  G  I  V  S  E  I  L  K  V  F  L  V  K  Y  G  K  Q  W  D  G  R  E  A  P  H  I  V  G  K  T  P  T  E  A  A  A  A  V  V  E  D  Y  G  L  P  L  S  R  D  E  F  L  S  Q  F  Y  P  M  L  S  D  Q :   W  R  N  I  K  A  L  P  G  A  N  R  L  I  N  H  L  S  G  H  G  V  P  M  A  L  A  S  N  S  S  K  S  N  I  E  A  K  I  F  H  H  A   : G  W  K  E  S  F  S  A  I  V  G  G  D  E  V  K  A  G  K  P  S  P  E  I :   F  L  E  A  A  K  R  L  N  M  D  P  S  S  F  L  V  I  E  D  S  I :   P  G  V  T  A  G  K  D  A  G  M  A  V  V  A  V  P  S  L  A  K  Q  S  H  L  Y  T  S  A  D  E  V  I  N  S  L  L  D  L  Q  L  E  K  W  G  L  P  A  F  Q  D   : R  I  E  G  T  L  P  L  E  P  W  Y  I  G  G  P  V  I  K  G  F  G  R  G  S  K  V  L  G  I  P  T   : A  N  L  S  P  Q  G  Y  S  A  I  L  S  E  H  P  A  G  V  Y  F  G  W  A  G  L  S  G  R  G  V  Y  K  M  V  M  S  I  G  W  N  P  F  F  N  N  T  E  K  T  V  :  E  P  W  L  L  H  D  F  N  E  D  F  Y  G  E  E  L  H  L  V  V  V  G  Y  I  R  P  E  :  A  N  F  S  S  L  E  A  L  I  A  K  I  H  E  D  R  K  I  A  E  R  A  L  E  L  P  Q  Y  L  K  Y  K  D  D  P  Y  L  K  S  S  L  H  Q  Q  N  *  S  L  K  C  *  S  S  L  L  F  *  L  G  L  Y  L  F  I  L  S  *  F  L  R  L  Q  *  S  P  H  Q  N  A  L  Y  N  K  K  I  K  R  I  *  M  Y  S  Y  S  E  V  K  E  P  S  R  G  Y  *  *  M  A  K  G  S  S  A  G  S  L  Y  *  E  F  Q  V  P  V  *  M  L  I  N  V  T  C  F  L  S  V  Y  N  M  E  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23329" stop="23136"/>
                    <exon start="22223" stop="22093"/>
                    <exon start="21965" stop="21896"/>
                    <exon start="21804" stop="21739"/>
                    <exon start="21190" stop="21036"/>
                    <exon start="20950" stop="20855"/>
                    <exon start="20576" stop="20425"/>
                    <exon start="20347" stop="20264"/>
                    <exon start="20188" stop="20048"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1086</number_coding_nucleotides>
                  <number_encoded_amino_acids>362</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTDGIVSEILKVFLVKYGKQWDGREAPHIVGKTPTEAAAAVVEDYGLPLSRDEFLSQFYPMLSDQWRNIKALPGANRLINHLSGHGVPMALASNSSKSNIEAKIFHHAGWKESFSAIVGGDEVKAGKPSPEIFLEAAKRLNMDPSSFLVIEDSIPGVTAGKDAGMAVVAVPSLAKQSHLYTSADEVINSLLDLQLEKWGLPAFQDRIEGTLPLEPWYIGGPVIKGFGRGSKVLGIPTANLSPQGYSAILSEHPAGVYFGWAGLSGRGVYKMVMSIGWNPFFNNTEKTVEPWLLHDFNEDFYGEELHLVVVGYIRPEANFSSLEALIAKIHEDRKIAERALELPQYLKYKDDPYLKSSLHQQN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="24731" e_stop="24647"/>
            <exon e_start="24029" e_stop="23920"/>
            <exon e_start="23322" e_stop="23136"/>
            <exon e_start="22223" e_stop="22093"/>
            <exon e_start="21965" e_stop="21896"/>
            <exon e_start="21804" e_stop="21739"/>
            <exon e_start="21190" e_stop="21036"/>
            <exon e_start="20950" e_stop="20855"/>
            <exon e_start="20576" e_stop="20425"/>
            <exon e_start="20347" e_stop="20264"/>
            <exon e_start="20188" e_stop="19731"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.549" e_score="0.976"/>
          <exon-intron don_prob="0.999" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.764" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.602" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.686" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.903" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.877" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.976">
            <gDNA_exon_boundary e_start="24731" e_stop="24647" e_length="85"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.549">
            <gDNA_intron_boundary i_start="24646" i_stop="24030" i_length="617"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24029" e_stop="23920" e_length="110"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.967">
            <gDNA_intron_boundary i_start="23919" i_stop="23323" i_length="597"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="23322" e_stop="23136" e_length="187"/>
          </exon>
          <intron i_serial="3" don_prob="0.764" acc_prob="0.996">
            <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="22223" e_stop="22093" e_length="131"/>
          </exon>
          <intron i_serial="4" don_prob="0.602" acc_prob="0.991">
            <gDNA_intron_boundary i_start="22092" i_stop="21966" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="21965" e_stop="21896" e_length="70"/>
          </exon>
          <intron i_serial="5" don_prob="0.968" acc_prob="0.686">
            <gDNA_intron_boundary i_start="21895" i_stop="21805" i_length="91"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="21804" e_stop="21739" e_length="66"/>
          </exon>
          <intron i_serial="6" don_prob="0.991" acc_prob="0.000">
            <gDNA_intron_boundary i_start="21738" i_stop="21191" i_length="548"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="21190" e_stop="21036" e_length="155"/>
          </exon>
          <intron i_serial="7" don_prob="0.903" acc_prob="0.905">
            <gDNA_intron_boundary i_start="21035" i_stop="20951" i_length="85"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="20950" e_stop="20855" e_length="96"/>
          </exon>
          <intron i_serial="8" don_prob="0.999" acc_prob="0.935">
            <gDNA_intron_boundary i_start="20854" i_stop="20577" i_length="278"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="20576" e_stop="20425" e_length="152"/>
          </exon>
          <intron i_serial="9" don_prob="0.877" acc_prob="0.958">
            <gDNA_intron_boundary i_start="20424" i_stop="20348" i_length="77"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="20347" e_stop="20264" e_length="84"/>
          </exon>
          <intron i_serial="10" don_prob="0.987" acc_prob="0.999">
            <gDNA_intron_boundary i_start="20263" i_stop="20189" i_length="75"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="20188" e_stop="19731" e_length="458"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24731" stop="24647"/>
              <exon start="24029" stop="23920"/>
              <exon start="23322" stop="23136"/>
              <exon start="22223" stop="22093"/>
              <exon start="21965" stop="21896"/>
              <exon start="21804" stop="21739"/>
              <exon start="21190" stop="21036"/>
              <exon start="20950" stop="20855"/>
              <exon start="20576" stop="20425"/>
              <exon start="20347" stop="20264"/>
              <exon start="20188" stop="19731"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23260" stop="23136"/>
              <exon start="22223" stop="22093"/>
              <exon start="21965" stop="21896"/>
              <exon start="21804" stop="21739"/>
              <exon start="21190" stop="21036"/>
              <exon start="20950" stop="20855"/>
              <exon start="20576" stop="20425"/>
              <exon start="20347" stop="20274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23257" stop="23136"/>
              <exon start="22223" stop="22093"/>
              <exon start="21965" stop="21896"/>
              <exon start="21804" stop="21739"/>
              <exon start="21190" stop="21046"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21965" stop="21896"/>
              <exon start="21804" stop="21739"/>
              <exon start="21190" stop="21036"/>
              <exon start="20950" stop="20946"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20549" stop="20425"/>
              <exon start="20347" stop="20264"/>
              <exon start="20188" stop="19766"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E692174" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAGTCCCCATTTCCCCATAACAACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT : GTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG : ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA : GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG : GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT : ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT : ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA : GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAG : CTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTT : GAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACATACGGCCGGAG : GCCAACTTTTCGTCACTTGAAGCCTTGATAGCAAAAATTCACGAGGACAGGAAGATTGCAGAAAGAGCTCTCGAACTTCCTCAATACTTGAAGTACAAGGACGATCCATACCTTAAAAGTTCTCTGCATCAACAAAATTGATCATTGAAGTGTTGAAGTTCATTATTGTTCTGATTGGGATTGTATCTGTTTATTCTGTCCTAATTCCTCAGACTACAATAGTCTCCCCATCAAAATGCTCTATACAATAAAAAGATAAAAAGAATTTGAATGTATAGCTATTCAGAAGTTAAAGAACCTTCCAGGGGGTATTAGTGAATGGCAAAGGGTTCAAGTGCAGGATCTTTGTACTGAGAATTTCAAGTTCCTGTGTAAATGTTGATTAATGTAACTTGTTTTCTATCTGTTTATAATATGGAAACATGCAAGCTGATGCAGATTGTAAATTGCTTCCTTTT</gDNA_template>
            <first_frame> S  V  P  I  S  P  *  Q  P  R  K  S  *  S  A  S  S  S  Q  F  N  N  Q  L  V  K  L  D   : C  I  C  F  C  V  A  D  N  C  S  P  C  L  L  N  E  L  S  R  S  *  F  L  V  S  S  L  I  W  M  V  H  F  L  I  Q  :  M  A  L  *  V  R  F  *  R  F  S  *  L  S  M  E  S  N  G  M  G  E  K  L  P  T  *  *  G  K  P  Q  Q  K  L  L  L  P  L  L  K  I  M  G  C  H  C  Q  E  M  N  F  F  R  N  F  T  Q  C  C  L  I   : S  G  A  I  S  K  L  F  Q  G  P  I  D  *  L  T  I  *  A  V  M  V  Y  P  W  H  W  R  Q  I  L  L  N  L  T  L  R  P  K  F  F  I  M  Q  :  D  G  K  S  P  S  Q  L  L  L  E  E  M  K  *  K  L  E  S  R  L  R  K   : Y  F  L  K  Q  L  K  D  S  T  W  I  H  P  A  F  L  S  L  K  I  Q   : Y  Q  V  L  L  L  V  K  M  L  E  W  Q  *  L  L  Y  H  L  L  Q  S  S  L  I  F  I  P  L  L  M  K  *  S  I  L  F  *  I  C  N  *  K  S  G  D  Y  L  H  F  K  I  :  G  *  K  V  L  C  L  *  N  L  G  I  *  V  V  L  S  L  R  D  L  G  A  A  Q  R  F  S  G  S  P  Q  :  L  I  Y  P  H  K  V  I  Q  P  F  F  Q  N  I  Q  R  V  Y  I  L  D  G  Q  D  Y  Q  V  E  V  S  T  R  W  S  *  A  L  V  G  I  L  S  S  T  I  Q  R  R  R  L :   N  H  G  C  F  M  T  S  M  R  T  S  M  V  R  N  C  I  *  L  L  W  A  T  Y  G  R  R :   P  T  F  R  H  L  K  P  *  *  Q  K  F  T  R  T  G  R  L  Q  K  E  L  S  N  F  L  N  T  *  S  T  R  T  I  H  T  L  K  V  L  C  I  N  K  I  D  H  *  S  V  E  V  H  Y  C  S  D  W  D  C  I  C  L  F  C  P  N  S  S  D  Y  N  S  L  P  I  K  M  L  Y  T  I  K  R  *  K  E  F  E  C  I  A  I  Q  K  L  K  N  L  P  G  G  I  S  E  W  Q  R  V  Q  V  Q  D  L  C  T  E  N  F  K  F  L  C  K  C  *  L  M  *  L  V  F  Y  L  F  I  I  W  K  H  A  S  *  C  R  L  *  I  A  S  F  </first_frame>
            <second_frame>  Q  S  P  F  P  H  N  N  Q  E  K  V  E  V  L  H  L  L  S  S  I  I  N  W  *  S  W  I  :  V  S  V  S  V  W  Q  I  I  A  L  H  V  C  *  T  N  F  Q  E  A  S  F  W  C  H  P  *  F  G  W  Y  T  S  *  Y  R :   W  H  C  E  *  D  F  K  G  F  L  S  *  V  W  K  A  M  G  W  E  R  S  S  P  H  S  R  E  N  P  N  R  S  C  C  C  R  C  *  R  L  W  A  A  T  V  K  R  *  I  S  F  A  I  L  P  N  A  V  *  S  :  V  A  Q  Y  Q  S  S  S  R  G  Q  S  I  D  *  P  F  E  R  S  W  C  T  H  G  I  G  V  K  F  F  *  I  *  H  *  G  Q  N  F  S  S  C  R :   M  E  R  V  L  L  S  Y  C  W  R  R  *  S  E  S  W  K  A  V  S  G  N  :  I  S  *  S  S  *  K  T  Q  H  G  S  I  Q  L  S  C  H  *  R  F  N  :  T  R  C  Y  C  W  *  R  C  W  N  G  S  S  C  C  T  I  S  C  K  A  V  S  S  L  Y  L  C  *  *  S  D  Q  F  S  S  R  F  A  T  R  K  V  G  T  T  C  I  S  R  * :   D  R  R  Y  F  A  F  R  T  L  V  Y  R  W  S  C  H  *  G  I  W  A  R  L  K  G  S  R  D  P  H  S :   *  F  I  P  T  R  L  F  S  H  S  F  R  T  S  S  G  C  I  F  W  M  G  R  T  I  R  S  R  C  L  Q  D  G  H  E  H  W  L  E  S  F  L  Q  Q  Y  R  E  D  G   : *  T  M  V  A  S  *  L  Q  *  G  L  L  W  *  G  I  A  S  S  C  C  G  L  H  T  A  G   : G  Q  L  F  V  T  *  S  L  D  S  K  N  S  R  G  Q  E  D  C  R  K  S  S  R  T  S  S  I  L  E  V  Q  G  R  S  I  P  *  K  F  S  A  S  T  K  L  I  I  E  V  L  K  F  I  I  V  L  I  G  I  V  S  V  Y  S  V  L  I  P  Q  T  T  I  V  S  P  S  K  C  S  I  Q  *  K  D  K  K  N  L  N  V  *  L  F  R  S  *  R  T  F  Q  G  V  L  V  N  G  K  G  F  K  C  R  I  F  V  L  R  I  S  S  S  C  V  N  V  D  *  C  N  L  F  S  I  C  L  *  Y  G  N  M  Q  A  D  A  D  C  K  L  L  P  F </second_frame>
            <third_frame>   S  P  H  F  P  I  T  T  K  K  K  L  K  C  F  I  F  S  V  Q  *  S  I  G  E  V  G  L :   Y  L  F  L  C  G  R  *  L  L  S  M  S  V  E  R  T  F  K  K  L  V  S  G  V  I  L  D  L  D  G  T  L  L  N  T   : D  G  I  V  S  E  I  L  K  V  F  L  V  K  Y  G  K  Q  W  D  G  R  E  A  P  H  I  V  G  K  T  P  T  E  A  A  A  A  V  V  E  D  Y  G  L  P  L  S  R  D  E  F  L  S  Q  F  Y  P  M  L  S  D  Q :   W  R  N  I  K  A  L  P  G  A  N  R  L  I  N  H  L  S  G  H  G  V  P  M  A  L  A  S  N  S  S  K  S  N  I  E  A  K  I  F  H  H  A   : G  W  K  E  S  F  S  A  I  V  G  G  D  E  V  K  A  G  K  P  S  P  E  I :   F  L  E  A  A  K  R  L  N  M  D  P  S  S  F  L  V  I  E  D  S  I :   P  G  V  T  A  G  K  D  A  G  M  A  V  V  A  V  P  S  L  A  K  Q  S  H  L  Y  T  S  A  D  E  V  I  N  S  L  L  D  L  Q  L  E  K  W  G  L  P  A  F  Q  D   : R  I  E  G  T  L  P  L  E  P  W  Y  I  G  G  P  V  I  K  G  F  G  R  G  S  K  V  L  G  I  P  T   : A  N  L  S  P  Q  G  Y  S  A  I  L  S  E  H  P  A  G  V  Y  F  G  W  A  G  L  S  G  R  G  V  Y  K  M  V  M  S  I  G  W  N  P  F  F  N  N  T  E  K  T  V  :  E  P  W  L  L  H  D  F  N  E  D  F  Y  G  E  E  L  H  L  V  V  V  G  Y  I  R  P  E  :  A  N  F  S  S  L  E  A  L  I  A  K  I  H  E  D  R  K  I  A  E  R  A  L  E  L  P  Q  Y  L  K  Y  K  D  D  P  Y  L  K  S  S  L  H  Q  Q  N  *  S  L  K  C  *  S  S  L  L  F  *  L  G  L  Y  L  F  I  L  S  *  F  L  R  L  Q  *  S  P  H  Q  N  A  L  Y  N  K  K  I  K  R  I  *  M  Y  S  Y  S  E  V  K  E  P  S  R  G  Y  *  *  M  A  K  G  S  S  A  G  S  L  Y  *  E  F  Q  V  P  V  *  M  L  I  N  V  T  C  F  L  S  V  Y  N  M  E  T  C  K  L  M  Q  I  V  N  C  F  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="3" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24004" stop="23920"/>
                    <exon start="23322" stop="23136"/>
                    <exon start="22223" stop="22093"/>
                    <exon start="21965" stop="21896"/>
                    <exon start="21804" stop="21739"/>
                    <exon start="21190" stop="21036"/>
                    <exon start="20950" stop="20855"/>
                    <exon start="20576" stop="20425"/>
                    <exon start="20347" stop="20264"/>
                    <exon start="20188" stop="20048"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1164</number_coding_nucleotides>
                  <number_encoded_amino_acids>388</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLSMSVERTFKKLVSGVILDLDGTLLNTDGIVSEILKVFLVKYGKQWDGREAPHIVGKTPTEAAAAVVEDYGLPLSRDEFLSQFYPMLSDQWRNIKALPGANRLINHLSGHGVPMALASNSSKSNIEAKIFHHAGWKESFSAIVGGDEVKAGKPSPEIFLEAAKRLNMDPSSFLVIEDSIPGVTAGKDAGMAVVAVPSLAKQSHLYTSADEVINSLLDLQLEKWGLPAFQDRIEGTLPLEPWYIGGPVIKGFGRGSKVLGIPTANLSPQGYSAILSEHPAGVYFGWAGLSGRGVYKMVMSIGWNPFFNNTEKTVEPWLLHDFNEDFYGEELHLVVVGYIRPEANFSSLEALIAKIHEDRKIAERALELPQYLKYKDDPYLKSSLHQQN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="20868" e_stop="20351"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="20868" e_stop="20351" e_length="518"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20868" stop="20351"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236449" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20868" stop="20385"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20868" stop="20389"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231386" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGTGACATATGTTTCTTCTGTATTCTTGACTTCTTTGGTGTTTGTTGAAAGACAACTTTACTTT</gDNA_template>
            <first_frame> R  D  P  H  R  Y  A  V  F  F  I  P  S  A  E  W  L  K  *  M  L  D  S  L  S  V  Y  T  *  N  D  L  R  I  S  Q  K  F  V  I  G  I  S  V  S  C  E  P  V  I  S  E  I  L  I  F  M  S  N  Y  Y  L  D  S  N  S  N  C  W  R  G  M  E  D  *  Y  L  A  S  Y  D  L  T  V  M  C  F  S  I  L  M  G  S  I  F  F  S  A  N  L  S  P  Q  G  Y  S  A  I  L  S  E  H  P  A  G  V  Y  F  G  W  A  G  L  S  G  R  G  V  Y  K  M  V  M  S  I  G  W  N  P  F  F  N  N  T  E  K  T  V  V  S  V  S  *  H  M  F  L  L  Y  S  *  L  L  W  C  L  L  K  D  N  F  T   </first_frame>
            <second_frame>  G  I  P  T  G  M  R  S  S  L  F  L  L  L  N  G  *  N  K  C  L  T  R  Y  L  C  I  L  E  M  T  *  E  F  L  R  S  L  L  L  E  F  Q  F  L  V  S  L  S  Y  Q  R  Y  *  F  L  C  Q  I  I  I  W  I  R  T  P  I  V  G  G  A  W  K  I  S  I  L  P  R  M  T  *  Q  *  C  V  F  L  F  L  W  G  Q  Y  S  F  Q  L  I  Y  P  H  K  V  I  Q  P  F  F  Q  N  I  Q  R  V  Y  I  L  D  G  Q  D  Y  Q  V  E  V  S  T  R  W  S  *  A  L  V  G  I  L  S  S  T  I  Q  R  R  R  L  *  V  C  R  D  I  C  F  F  C  I  L  D  F  F  G  V  C  *  K  T  T  L  L  </second_frame>
            <third_frame>   G  S  P  Q  V  C  G  L  L  Y  S  F  C  *  M  A  K  I  N  A  *  L  V  I  C  V  Y  L  K  *  L  E  N  F  S  E  V  C  Y  W  N  F  S  F  L  *  A  C  H  I  R  D  I  D  F  Y  V  K  L  L  S  G  F  E  L  Q  L  L  E  G  H  G  R  L  V  S  C  L  V  *  L  N  S  D  V  F  F  Y  S  Y  G  V  N  I  L  F  S  *  F  I  P  T  R  L  F  S  H  S  F  R  T  S  S  G  C  I  F  W  M  G  R  T  I  R  S  R  C  L  Q  D  G  H  E  H  W  L  E  S  F  L  Q  Q  Y  R  E  D  G  C  K  C  V  V  T  Y  V  S  S  V  F  L  T  S  L  V  F  V  E  R  Q  L  Y  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="3" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20643" stop="20410"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YLASYDLTVMCFSILMGSIFFSANLSPQGYSAILSEHPAGVYFGWAGLSGRGVYKMVMSIGWNPFFNNTEKTVVSVS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="3" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20572" stop="20351"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FIPTRLFSHSFRTSSGCIFWMGRTIRSRCLQDGHEHWLESFLQQYREDGCKCVVTYVSSVFLTSLVFVERQLYF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="23331" e_stop="23136"/>
            <exon e_start="22223" e_stop="21896"/>
            <exon e_start="21804" e_stop="21739"/>
            <exon e_start="21077" e_stop="21036"/>
            <exon e_start="20950" e_stop="20915"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.764" acc_prob="0.996" e_score="0.969"/>
          <exon-intron don_prob="0.968" acc_prob="0.686" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.903" acc_prob="0.905" e_score="0.976"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="23331" e_stop="23136" e_length="196"/>
          </exon>
          <intron i_serial="1" don_prob="0.764" acc_prob="0.996">
            <gDNA_intron_boundary i_start="23135" i_stop="22224" i_length="912"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="22223" e_stop="21896" e_length="328"/>
          </exon>
          <intron i_serial="2" don_prob="0.968" acc_prob="0.686">
            <gDNA_intron_boundary i_start="21895" i_stop="21805" i_length="91"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="21804" e_stop="21739" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.000">
            <gDNA_intron_boundary i_start="21738" i_stop="21078" i_length="661"/>
          </intron>
          <exon e_serial="4" e_score="0.976">
            <gDNA_exon_boundary e_start="21077" e_stop="21036" e_length="42"/>
          </exon>
          <intron i_serial="4" don_prob="0.903" acc_prob="0.905">
            <gDNA_intron_boundary i_start="21035" i_stop="20951" i_length="85"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="20950" e_stop="20915" e_length="36"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23331" stop="23136"/>
              <exon start="22223" stop="22116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273774" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22152" stop="21896"/>
              <exon start="21804" stop="21739"/>
              <exon start="21077" stop="21036"/>
              <exon start="20950" stop="20915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243460" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA : GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT : ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT : ATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA : GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATA</gDNA_template>
            <first_frame> F  *  Q  M  A  L  *  V  R  F  *  R  F  S  *  L  S  M  E  S  N  G  M  G  E  K  L  P  T  *  *  G  K  P  Q  Q  K  L  L  L  P  L  L  K  I  M  G  C  H  C  Q  E  M  N  F  F  R  N  F  T  Q  C  C  L  I   : S  G  A  I  S  K  L  F  Q  G  P  I  D  *  L  T  I  *  A  V  M  V  Y  P  W  H  W  R  Q  I  L  L  N  L  T  L  R  P  K  F  F  I  M  Q  V  E  F  *  H  V  L  L  E  R  Y  F  F  P  *  E  G  I  L  C  Q  S  S  M  *  D  G  I  Y  A  W  C  F  D  W  D  S  L  Y  F  F  S  G  W  K  E  S  F  S  A  I  V  G  G  D  E  V  K  A  G  K  P  S  P  E  I :   F  L  E  A  A  K  R  L  N  M  D  P  S  S  F  L  V  I  E  D  S  I :   F  A  T  R  K  V  G  T  T  C  I  S  R  * :   D  R  R  Y  F  A  F  R  T  L  V   </first_frame>
            <second_frame>  S  D  R  W  H  C  E  *  D  F  K  G  F  L  S  *  V  W  K  A  M  G  W  E  R  S  S  P  H  S  R  E  N  P  N  R  S  C  C  C  R  C  *  R  L  W  A  A  T  V  K  R  *  I  S  F  A  I  L  P  N  A  V  *  S  :  V  A  Q  Y  Q  S  S  S  R  G  Q  S  I  D  *  P  F  E  R  S  W  C  T  H  G  I  G  V  K  F  F  *  I  *  H  *  G  Q  N  F  S  S  C  R  *  S  S  N  M  Y  C  *  R  G  I  S  F  L  R  K  V  F  C  A  S  P  A  C  K  M  A  F  M  L  G  A  L  I  G  I  V  F  I  F  F  Q  D  G  K  S  P  S  Q  L  L  L  E  E  M  K  *  K  L  E  S  R  L  R  K   : Y  F  L  K  Q  L  K  D  S  T  W  I  H  P  A  F  L  S  L  K  I  Q   : Y  L  Q  L  E  K  W  G  L  P  A  F  Q  D   : R  I  E  G  T  L  P  L  E  P  W  Y  </second_frame>
            <third_frame>   L  T  D  G  I  V  S  E  I  L  K  V  F  L  V  K  Y  G  K  Q  W  D  G  R  E  A  P  H  I  V  G  K  T  P  T  E  A  A  A  A  V  V  E  D  Y  G  L  P  L  S  R  D  E  F  L  S  Q  F  Y  P  M  L  S  D  Q :   W  R  N  I  K  A  L  P  G  A  N  R  L  I  N  H  L  S  G  H  G  V  P  M  A  L  A  S  N  S  S  K  S  N  I  E  A  K  I  F  H  H  A  G  R  V  L  T  C  I  A  R  E  V  F  L  S  L  G  R  Y  F  V  P  V  Q  H  V  R  W  H  L  C  L  V  L  *  L  G  *  S  L  F  F  F  R  M  E  R  V  L  L  S  Y  C  W  R  R  *  S  E  S  W  K  A  V  S  G  N  :  I  S  *  S  S  *  K  T  Q  H  G  S  I  Q  L  S  C  H  *  R  F  N  :  I  C  N  *  K  S  G  D  Y  L  H  F  K  I  :  G  *  K  V  L  C  L  *  N  L  G  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="3" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23329" stop="23136"/>
                    <exon start="22223" stop="21992"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>423</number_coding_nucleotides>
                  <number_encoded_amino_acids>141</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTDGIVSEILKVFLVKYGKQWDGREAPHIVGKTPTEAAAAVVEDYGLPLSRDEFLSQFYPMLSDQWRNIKALPGANRLINHLSGHGVPMALASNSSKSNIEAKIFHHAGRVLTCIAREVFLSLGRYFVPVQHVRWHLCLVL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="3" AGS_serial="5" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22017" stop="21896"/>
                    <exon start="21804" stop="21739"/>
                    <exon start="21077" stop="20950"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DGIYAWCFDWDSLYFFSGWKESFSAIVGGDEVKAGKPSPEIFLEAAKRLNMDPSSFLVIEDSIFATRKVGTTCISR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="49360" PGL_stop="55957"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49360" e_stop="49498"/>
            <exon e_start="50704" e_stop="50764"/>
            <exon e_start="52409" e_stop="52527"/>
            <exon e_start="54748" e_stop="54881"/>
            <exon e_start="55021" e_stop="55171"/>
            <exon e_start="55266" e_stop="55425"/>
            <exon e_start="55501" e_stop="55957"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.844" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.949" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.296" e_score="1.000"/>
          <exon-intron don_prob="0.802" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="49360" e_stop="49498" e_length="139"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.981">
            <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="50704" e_stop="50764" e_length="61"/>
          </exon>
          <intron i_serial="2" don_prob="0.844" acc_prob="0.953">
            <gDNA_intron_boundary i_start="50765" i_stop="52408" i_length="1644"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="52409" e_stop="52527" e_length="119"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.984">
            <gDNA_intron_boundary i_start="52528" i_stop="54747" i_length="2220"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="54748" e_stop="54881" e_length="134"/>
          </exon>
          <intron i_serial="4" don_prob="0.973" acc_prob="0.949">
            <gDNA_intron_boundary i_start="54882" i_stop="55020" i_length="139"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="55021" e_stop="55171" e_length="151"/>
          </exon>
          <intron i_serial="5" don_prob="0.989" acc_prob="0.296">
            <gDNA_intron_boundary i_start="55172" i_stop="55265" i_length="94"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="55266" e_stop="55425" e_length="160"/>
          </exon>
          <intron i_serial="6" don_prob="0.802" acc_prob="1.000">
            <gDNA_intron_boundary i_start="55426" i_stop="55500" i_length="75"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="55501" e_stop="55957" e_length="457"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49360" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55282"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262485" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49360" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262085" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49378" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55957"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49382" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246132" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49383" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55281"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246339" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49383" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49385" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55271"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272791" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49394" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262473" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49394" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55110"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49395" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55406"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49395" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55402"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316318" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49395" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55153"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49397" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729548" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49399" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245532" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49400" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55380"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260922" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49403" stop="49498"/>
              <exon start="50704" stop="50764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261316" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49407" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55149"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271454" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49407" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55063"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228171" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49407" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54843"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201767" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49409" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244849" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49415" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49420" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55582"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263068" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49420" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275174" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49421" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55045"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308097" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49422" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49423" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55285"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213049" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49449" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55370"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214856" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50704" stop="50764"/>
              <exon start="52409" stop="52511"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50707" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50708" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55585"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211081" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50708" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55379"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237885" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50708" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55370"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235548" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50708" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55293"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50708" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54775"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50709" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55690"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50711" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54830"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50714" stop="50764"/>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55416"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55633"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377234" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55384"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233029" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52409" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55371"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698728" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52438" stop="52527"/>
              <exon start="54748" stop="54873"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52468" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55571"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235625" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52468" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55528"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233696" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52468" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55281"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52505" stop="52527"/>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244451" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54748" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55364"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202081" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54838" stop="54881"/>
              <exon start="55021" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348279" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55036" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243540" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55036" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55044" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55756"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55044" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55723"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236250" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55128" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55951"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377233" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55151" stop="55171"/>
              <exon start="55266" stop="55425"/>
              <exon start="55501" stop="55955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397973" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55378" stop="55425"/>
              <exon start="55501" stop="55955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55418" stop="55425"/>
              <exon start="55501" stop="55953"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229994" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGACTGCTTGTTTTTCTTTCTCCATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT : ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG : AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG : GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG : GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG : AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG : GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCATAT</gDNA_template>
            <first_frame> *  L  L  V  F  L  S  P  S  W  T  A  *  A  K  G  I  L  V  I  R  N  A  A  S  H  S  A  I  A  *  P  F  F  I  R  F  V  H  L  W  L  S  L  F  P   : Y  T  R  T  *  Q  V  F  V  D  G  R  E  L  T  G  D  G  G  L  G :   G  Y  T  S  S  R  S  T  *  E  G  S  A  N  K  *  M  G  *  *  R  C  R  *  *  *  C  K  R  I  L  G  R  *  R  G  A  C  S   : G  T  *  T  R  T  S  C  *  E  G  P  Q  E  V  C  C  K  G  W  *  K  E  R  Q  G  S  S  Y  *  *  R  A  S  R  S  S  S  R  K  T  S  P  A  K  :  A  C  R  R  S  *  L  *  V  H  G  *  I  V  C  Q  E  R  W  *  *  Q  D  P  R  K  F  Y  P  K  K  *  E  *  L  L  G  I  C  *  A  D  I  S  *  A  A  T  V  *   : E  K  L  P  L  H  W  V  A  Q  G  C  Y  E  I  V  D  D  L  V  E  R  A  R  C  *  R  H  W  F  F  Y  Y  C  I  C  K  *  E  D  *  S  R  K  G  S  H  C  E  *  K  E  D  R :   C  K  E  E  A  A  T  C  *  *  G  R  *  *  C  S  S  K  C  I  *  W  L  *  *  L  *  F  H  V  K  R  G  K  L  S  K  D  R  H  V  R  P  F  F  S  P  F  *  L  H  Q  S  G  D  L  L  N  L  L  V  T  T  T  R  K  I  L  G  P  C  Y  L  P  I  L  E  S  Y  *  V  C  H  I  F  F  F  L  F  R  R  V  K  *  E  S  I  L  C  F  V  Y  I  L  W  S  V  T  G  W  R  S  V  G  K  *  F  V  G  *  S  A  F  S  C  M  I  Q  I  S  D  F  G  P  I  D  F  M  *  L  S  Y  S  K  L  F  D  P  F  F  S  Y </first_frame>
            <second_frame>  D  C  L  F  F  F  L  H  L  G  L  L  E  P  R  A  F  W  S  S  E  T  L  L  H  I  L  L  L  L  N  H  F  S  S  D  L  F  T  S  G  Y  L  S  S  H  :  I  L  E  L  N  K  F  L  W  T  E  E  N  *  L  E  M  E  D  W   : E  D  I  P  V  P  D  L  L  K  K  D  Q  P  T  S  K  W  D  D  E  D  A  D  D  D  D  V  K  E  S  W  E  D  E  E  E  P  A  P  :  A  P  K  P  E  P  P  A  E  K  A  P  K  K  S  A  A  K  A  G  E  K  K  G  K  E  V  H  T  N  E  E  P  L  D  P  V  A  E  K  L  R  Q  Q  R :   L  V  E  E  A  D  Y  K  S  T  A  E  L  F  A  K  K  G  G  D  D  K  T  L  E  N  F  I  P  K  S  E  S  D  F  L  E  Y  A  E  L  I  S  H  K  L  R  P  F  E  :  K  S  Y  H  Y  I  G  L  L  K  A  V  M  R  L  S  M  T  S  L  K  G  Q  D  A  K  D  I  G  S  S  I  T  A  F  A  N  E  K  I  K  A  E  K  E  A  T  A  S  K  K  K  T   : G  A  K  K  K  Q  L  H  V  D  K  A  D  D  D  A  V  V  N  A  Y  D  G  Y  D  D  Y  D  F  M  *  R  G  G  N  L  A  K  T  G  M  L  G  R  F  F  H  L  S  S  Y  I  S  L  E  I  F  *  I  Y  *  *  Q  L  R  G  R  S  W  G  H  V  T  S  L  F  W  S  L  I  E  C  V  I  S  F  S  F  C  S  V  G  S  N  K  K  V  S  F  V  L  F  T  F  C  G  Q  L  L  V  G  D  P  L  V  N  D  L  S  V  D  L  H  S  L  V  *  F  R  S  Q  I  L  D  L  *  I  S  C  N  C  L  I  Q  N  Y  L  I  L  S  F  H   </second_frame>
            <third_frame>   T  A  C  F  S  F  S  I  L  D  C  L  S  Q  G  H  F  G  H  Q  K  R  C  F  T  F  C  Y  C  L  T  I  F  H  Q  I  C  S  P  L  V  I  S  L  P  I :   Y  S  N  L  T  S  F  C  G  R  K  R  I  N  W  R  W  R  I  G  :  R  I  Y  Q  F  Q  I  Y  L  R  R  I  S  Q  Q  V  N  G  M  M  K  M  Q  M  M  M  M  *  K  N  L  G  K  M  K  R  S  L  L  R :   H  L  N  Q  N  L  L  L  R  R  P  P  R  S  L  L  Q  R  L  V  K  R  K  A  R  K  F  I  L  M  K  S  L  *  I  Q  *  Q  K  N  F  A  S  K   : G  L  *  K  K  L  I  I  S  P  R  L  N  C  L  P  R  K  V  V  M  T  R  P  *  K  I  L  S  Q  K  V  R  V  T  S  W  N  M  L  S  *  Y  L  I  S  C  D  R  L  R :   K  A  T  T  T  L  G  C  S  R  L  L  *  D  C  R  *  P  R  *  K  G  K  M  L  K  T  L  V  L  L  L  L  H  L  Q  M  R  R  L  K  Q  K  R  K  P  L  R  V  K  R  R  Q  :  V  Q  R  R  S  S  Y  M  L  I  R  Q  M  M  M  Q  *  *  M  H  M  M  V  M  M  I  M  I  S  C  E  E  G  E  T  *  Q  R  Q  A  C  *  A  V  F  F  T  F  L  A  T  S  V  W  R  S  F  E  S  T  S  D  N  Y  E  E  D  L  G  A  M  L  P  P  Y  S  G  V  L  L  S  V  S  Y  L  F  L  S  V  P  S  G  Q  I  R  K  Y  P  L  F  C  L  H  F  V  V  S  Y  W  L  E  I  R  W  *  M  I  C  R  L  I  C  I  L  L  Y  D  S  D  L  R  F  W  T  Y  R  F  H  V  T  V  L  F  K  T  I  *  S  F  L  F  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50746" stop="50764"/>
                    <exon start="52409" stop="52527"/>
                    <exon start="54748" stop="54881"/>
                    <exon start="55021" stop="55171"/>
                    <exon start="55266" stop="55425"/>
                    <exon start="55501" stop="55592"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>672</number_coding_nucleotides>
                  <number_encoded_amino_acids>224</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LEMEDWEDIPVPDLLKKDQPTSKWDDEDADDDDVKESWEDEEEPAPAPKPEPPAEKAPKKSAAKAGEKKGKEVHTNEEPLDPVAEKLRQQRLVEEADYKSTAELFAKKGGDDKTLENFIPKSESDFLEYAELISHKLRPFEKSYHYIGLLKAVMRLSMTSLKGQDAKDIGSSITAFANEKIKAEKEATASKKKTGAKKKQLHVDKADDDAVVNAYDGYDDYDFM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55627" stop="55845"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AVFFTFLATSVWRSFESTSDNYEEDLGAMLPPYSGVLLSVSYLFLSVPSGQIRKYPLFCLHFVVSYWLEIRW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="49395" e_stop="49498"/>
            <exon e_start="50704" e_stop="50764"/>
            <exon e_start="51494" e_stop="52283"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.844" acc_prob="0.821" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="49395" e_stop="49498" e_length="104"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.981">
            <gDNA_intron_boundary i_start="49499" i_stop="50703" i_length="1205"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="50704" e_stop="50764" e_length="61"/>
          </exon>
          <intron i_serial="2" don_prob="0.844" acc_prob="0.821">
            <gDNA_intron_boundary i_start="50765" i_stop="51493" i_length="729"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="51494" e_stop="52283" e_length="790"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49395" stop="49498"/>
              <exon start="50704" stop="50764"/>
              <exon start="51494" stop="52092"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49403" stop="49498"/>
              <exon start="50704" stop="50764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261316" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51518" stop="52283"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317424" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT : ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG : GTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTAT</gDNA_template>
            <first_frame> L  S  Q  G  H  F  G  H  Q  K  R  C  F  T  F  C  Y  C  L  T  I  F  H  Q  I  C  S  P  L  V  I  S  L  P  I :   Y  S  N  L  T  S  F  C  G  R  K  R  I  N  W  R  W  R  I  G  :  V  S  R  R  C  K  R  Y  K  R  E  M  H  P  K  K  L  Y  *  I  *  G  A  K  V  Q  N  R  P  V  Q  F  E  V  L  Q  L  I  N  Q  A  S  S  F  *  R  V  D  G  F  E  I  P  S  K  H  I  R  F  *  L  C  K  Y  T  K  R  Y  S  Q  G  S  *  S  G  S  P  L  T  L  K  L  H  Q  L  Q  D  S  *  T  S  V  T  L  C  G  M  T  L  L  T  S  K  *  S  R  T  I  P  Q  V  S  N  N  F  V  L  A  L  Y  M  L  C  H  H  S  H  H  N  R  V  L  C  V  A  E  M  K  R  N  K  Q  *  S  K  N  S  S  H  *  S  M  V  S  C  L  C  C  L  Y  C  G  K  R  L  I  I  L  A  S  G  L  S  K  C  S  A  Y  S  L  E  L  T  G  S  F  F  S  I  A  F  T  R  S  N  Y  H  C  N  W  L  T  V  H  S  N  W  N  K  T  I  D  V  G  S  L  F  L  E  I  L  L  V  Q  T  S  L  F  L  G  L  I  H  L  S  F  *  E  D  L  D  S  L  S  M  G  H  *  H  G  L  L  C  M  Q  K  K  G  C  T  I  I  L  </first_frame>
            <second_frame>  *  A  K  G  I  L  V  I  R  N  A  A  S  H  S  A  I  A  *  P  F  F  I  R  F  V  H  L  W  L  S  L  F  P   : Y  T  R  T  *  Q  V  F  V  D  G  R  E  L  T  G  D  G  G  L  G :   C  Q  E  D  A  K  G  T  K  E  R  C  I  Q  R  N  Y  I  R  F  R  E  L  K  S  K  T  D  Q  C  N  L  R  C  S  N  *  L  T  R  H  L  A  F  E  E  W  T  D  L  R  F  H  Q  N  I  Y  G  S  N  C  V  S  T  P  K  D  I  H  R  D  H  N  P  D  L  L  *  L  *  N  F  I  N  S  K  I  H  R  L  L  *  L  S  V  V  *  P  Y  *  L  Q  N  R  V  E  R  F  L  K  S  A  T  I  L  F  *  P  Y  I  C  F  V  I  T  H  T  T  T  G  F  C  V  W  Q  K  *  N  G  I  N  N  N  L  R  I  H  L  T  N  Q  W  *  A  A  Y  A  V  S  I  V  V  S  V  *  *  Y  L  L  L  D  C  L  S  A  Q  P  I  H  L  N  S  L  V  H  F  L  A  *  H  L  Q  E  A  T  T  I  V  T  G  *  L  F  T  V  I  G  I  K  P  *  M  L  V  P  Y  F  W  R  F  C  L  F  K  P  V  Y  F  W  V  *  F  I  C  L  S  E  K  T  W  I  P  S  P  W  D  I  D  M  V  Y  C  A  C  R  K  R  D  V  P  *  S  Y </second_frame>
            <third_frame>   E  P  R  A  F  W  S  S  E  T  L  L  H  I  L  L  L  L  N  H  F  S  S  D  L  F  T  S  G  Y  L  S  S  H  :  I  L  E  L  N  K  F  L  W  T  E  E  N  *  L  E  M  E  D  W   : G  V  K  K  M  Q  K  V  Q  K  R  D  A  S  K  E  T  I  L  D  L  G  S  *  S  P  K  Q  T  S  A  I  *  G  A  P  T  N  *  P  G  I  *  L  L  K  S  G  R  I  *  D  S  I  K  T  Y  T  V  L  T  V  *  V  H  Q  K  I  F  T  G  I  I  I  R  I  S  S  D  F  K  T  S  S  T  P  R  F  I  D  F  C  D  S  L  W  Y  D  P  I  D  F  K  I  E  *  N  D  S  S  S  Q  Q  Q  F  C  F  S  L  I  Y  A  L  S  S  L  T  P  Q  Q  G  F  V  C  G  R  N  E  T  E  *  T  I  I  *  E  F  I  S  L  I  N  G  K  L  L  M  L  S  L  L  W  *  A  F  N  N  T  C  F  W  I  V  *  V  L  S  L  F  T  *  T  H  W  F  I  F  *  H  S  I  Y  K  K  Q  L  P  L  *  L  V  D  C  S  Q  *  L  E  *  N  H  R  C  W  F  P  I  S  G  D  F  A  C  S  N  Q  F  I  F  G  F  D  S  F  V  F  L  R  R  L  G  F  P  L  H  G  T  L  T  W  F  I  V  H  A  E  K  G  M  Y  H  N  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="+"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51944" stop="52204"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SMVSCLCCLYCGKRLIILASGLSKCSAYSLELTGSFFSIAFTRSNYHCNWLTVHSNWNKTIDVGSLFLEILLVQTSLFLGLIHLSF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="+"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="49395" stop="49498"/>
                    <exon start="50704" stop="50764"/>
                    <exon start="51494" stop="51550"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSQGHFGHQKRCFTFCYCLTIFHQICSPLVISLPIYSNLTSFCGRKRINWRWRIGVSRRCKRYKREMHPKKLY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="49511" e_stop="50079"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="49511" e_stop="50079" e_length="569"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49511" stop="50079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297013" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49511" stop="50059"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297011" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49511" stop="50002"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297009" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATT</gDNA_template>
            <first_frame> F  F  I  Y  W  V  I  A  L  F  L  V  Y  S  F  N  L  V  S  W  F  N  L  L  F  F  S  A  I  G  V  F  G  G  I  Y  M  R  Q  Y  L  S  R  T  H  H  I  I  Y  S  C  V  Y  E  R  K  L  G  L  S  D  L  *  L  L  R  T  D  L  V  A  V  L  G  F  S  R  L  C  R  P  F  I  Q  C  P  T  D  S  N  T  D  V  N  *  H  F  F  L  P  L  F  Y  G  F  *  Q  V  S  V  C  V  G  I  D  I  I  W  A  A  R  *  C  S  *  L  I  L  A  F  Y  *  H  C  V  M  V  F  D  N  F  V  C  V  G  I  D  R  I  L  G  V  R  *  I  S  *  L  I  L  E  F  H  *  H  C  V  M  V  F  D  K  F  V  C  V  G  I  N  R  I  L  G  A  R  *  F  S  *   </first_frame>
            <second_frame>  S  S  S  I  G  L  L  L  C  F  W  F  I  R  S  I  L  F  L  G  S  I  Y  C  F  S  L  R  L  A  S  S  E  V  Y  I  C  V  S  I  *  V  A  R  I  I  S  Y  I  L  V  S  M  N  G  N  *  G  F  R  I  C  N  F  *  E  L  I  *  W  R  F  *  G  S  A  A  F  A  D  L  L  Y  N  V  R  P  T  R  T  L  M  L  I  D  T  F  F  F  H  C  F  M  V  F  D  K  S  L  C  V  *  V  L  I  *  F  G  Q  R  G  D  V  L  D  *  Y  W  R  F  I  D  T  V  L  W  F  L  T  I  L  Y  V  W  V  L  I  E  S  W  E  *  G  E  F  L  D  *  Y  W  S  S  I  D  I  V  L  W  F  L  T  S  L  Y  V  W  V  L  I  E  S  W  E  R  G  D  F  L  D  </second_frame>
            <third_frame>   L  H  L  L  G  Y  C  S  V  F  G  L  F  V  Q  S  C  F  L  V  Q  F  I  V  F  L  C  D  W  R  L  R  R  Y  I  Y  A  S  V  F  E  S  H  A  S  Y  H  I  F  L  C  L  *  T  E  I  R  A  F  G  F  V  T  F  E  N  *  F  S  G  G  F  R  V  Q  P  P  L  P  T  F  Y  T  M  S  D  R  L  E  H  *  C  *  L  T  L  F  S  S  T  V  L  W  F  L  T  S  L  C  V  C  R  Y  *  Y  N  L  G  S  E  V  M  F  L  I  N  I  G  V  L  L  T  L  C  Y  G  F  *  Q  F  C  M  C  G  Y  *  *  N  L  G  S  E  V  N  F  L  I  N  I  G  V  P  L  T  L  C  Y  G  F  *  Q  V  C  M  C  G  Y  *  *  N  L  G  S  E  V  I  F  L  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0329G05.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="57780" PGL_stop="63082"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57780" e_stop="57872"/>
            <exon e_start="58765" e_stop="58842"/>
            <exon e_start="59587" e_stop="59826"/>
            <exon e_start="59956" e_stop="60036"/>
            <exon e_start="60489" e_stop="60631"/>
            <exon e_start="62803" e_stop="62963"/>
            <exon e_start="63051" e_stop="63082"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.982" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.838" acc_prob="0.144" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.859" e_score="1.000"/>
          <exon-intron don_prob="0.942" acc_prob="0.859" e_score="1.000"/>
          <exon-intron don_prob="0.743" acc_prob="0.904" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="57780" e_stop="57872" e_length="93"/>
          </exon>
          <intron i_serial="1" don_prob="0.982" acc_prob="0.992">
            <gDNA_intron_boundary i_start="57873" i_stop="58764" i_length="892"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="58765" e_stop="58842" e_length="78"/>
          </exon>
          <intron i_serial="2" don_prob="0.974" acc_prob="0.959">
            <gDNA_intron_boundary i_start="58843" i_stop="59586" i_length="744"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="59587" e_stop="59826" e_length="240"/>
          </exon>
          <intron i_serial="3" don_prob="0.838" acc_prob="0.144">
            <gDNA_intron_boundary i_start="59827" i_stop="59955" i_length="129"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="59956" e_stop="60036" e_length="81"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.859">
            <gDNA_intron_boundary i_start="60037" i_stop="60488" i_length="452"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="60489" e_stop="60631" e_length="143"/>
          </exon>
          <intron i_serial="5" don_prob="0.942" acc_prob="0.859">
            <gDNA_intron_boundary i_start="60632" i_stop="62802" i_length="2171"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="62803" e_stop="62963" e_length="161"/>
          </exon>
          <intron i_serial="6" don_prob="0.743" acc_prob="0.904">
            <gDNA_intron_boundary i_start="62964" i_stop="63050" i_length="87"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="63051" e_stop="63082" e_length="32"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57780" stop="57872"/>
              <exon start="58765" stop="58842"/>
              <exon start="59587" stop="59826"/>
              <exon start="59956" stop="60031"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315645" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59684" stop="59826"/>
              <exon start="59956" stop="60036"/>
              <exon start="60489" stop="60631"/>
              <exon start="62803" stop="62963"/>
              <exon start="63051" stop="63082"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212514" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAAAGAACATAACTTCCATATGTTGGCGTCCTGATGGGAAAGCAATTGCAGTTGGGCTTGAAGATGGGACCATCTCCTTGCATGATGTAGAA : AATGGAAAGCTGCTGCGAAACATAAAATCCCACTCGGCTGATGTCGTGTGTCTCCATTGGGAGGAGGATGGGAAGAAG : GACATGAACAGTAATACCTCCAGTTATGAAGATCGAACTTCACGGTTCTTTCCTCCTCCCCCTAGAGTTCCTAAGATGCCTGGACTTGTACCTGGGGATAGTGGCTTCATGGATGATGGAGAGGATTCTTTCCAGGAGCTATCAAATTCTTCACATCAAAGATATAACATTTTATGTAGCGGGGACAAGGATGGAAGTATCTGCTTCAATATCTTTGGCATATTTCCAATAGGGACAGTT : AATATACACAACCTTGTTGTCTCCAGTTCACTCTCAAGCAGCAATGTTGCTAGCCGACTTCTGAATGCTTCCATTTGTAAG : GTGGCCTTGTCCAAAGATCTTTGCCATTTAGTAGTTTTGTGCAATGGGGAGCTGATCACAGATGAGGTTGATCAAGGTGAAGGACATCATGGGTTACTTGGCTTTCACTGCTTAGTCCTCAATACTTCAATATTTTCCAAAAG : GAAAACTGAACTTCACCAGGTTGCCCAACAGGCTTCCAACATTGAAGATCTGAGTGAAGTCATCCGGACATCACTATCAGTCATGTCTAAAATATGGTCCGATGCTATGCATACATTTCACGAGAAGTTCAATGCTGTATCCACATTGATCGCTGATCATG : GACTTGACTCTACTCCTCAGGATGAGTTTCTA</gDNA_template>
            <first_frame> G  K  N  I  T  S  I  C  W  R  P  D  G  K  A  I  A  V  G  L  E  D  G  T  I  S  L  H  D  V  E  :  N  G  K  L  L  R  N  I  K  S  H  S  A  D  V  V  C  L  H  W  E  E  D  G  K  K  :  D  M  N  S  N  T  S  S  Y  E  D  R  T  S  R  F  F  P  P  P  P  R  V  P  K  M  P  G  L  V  P  G  D  S  G  F  M  D  D  G  E  D  S  F  Q  E  L  S  N  S  S  H  Q  R  Y  N  I  L  C  S  G  D  K  D  G  S  I  C  F  N  I  F  G  I  F  P  I  G  T  V  :  N  I  H  N  L  V  V  S  S  S  L  S  S  S  N  V  A  S  R  L  L  N  A  S  I  C  K  :  V  A  L  S  K  D  L  C  H  L  V  V  L  C  N  G  E  L  I  T  D  E  V  D  Q  G  E  G  H  H  G  L  L  G  F  H  C  L  V  L  N  T  S  I  F  S  K  R :   K  T  E  L  H  Q  V  A  Q  Q  A  S  N  I  E  D  L  S  E  V  I  R  T  S  L  S  V  M  S  K  I  W  S  D  A  M  H  T  F  H  E  K  F  N  A  V  S  T  L  I  A  D  H   : G  L  D  S  T  P  Q  D  E  F  L </first_frame>
            <second_frame>  E  R  T  *  L  P  Y  V  G  V  L  M  G  K  Q  L  Q  L  G  L  K  M  G  P  S  P  C  M  M  *  K :   M  E  S  C  C  E  T  *  N  P  T  R  L  M  S  C  V  S  I  G  R  R  M  G  R  R :   T  *  T  V  I  P  P  V  M  K  I  E  L  H  G  S  F  L  L  P  L  E  F  L  R  C  L  D  L  Y  L  G  I  V  A  S  W  M  M  E  R  I  L  S  R  S  Y  Q  I  L  H  I  K  D  I  T  F  Y  V  A  G  T  R  M  E  V  S  A  S  I  S  L  A  Y  F  Q  *  G  Q  L :   I  Y  T  T  L  L  S  P  V  H  S  Q  A  A  M  L  L  A  D  F  *  M  L  P  F  V  R :   W  P  C  P  K  I  F  A  I  *  *  F  C  A  M  G  S  *  S  Q  M  R  L  I  K  V  K  D  I  M  G  Y  L  A  F  T  A  *  S  S  I  L  Q  Y  F  P  K   : G  K  L  N  F  T  R  L  P  N  R  L  P  T  L  K  I  *  V  K  S  S  G  H  H  Y  Q  S  C  L  K  Y  G  P  M  L  C  I  H  F  T  R  S  S  M  L  Y  P  H  *  S  L  I  M  :  D  L  T  L  L  L  R  M  S  F   </second_frame>
            <third_frame>   K  E  H  N  F  H  M  L  A  S  *  W  E  S  N  C  S  W  A  *  R  W  D  H  L  L  A  *  C  R   : K  W  K  A  A  A  K  H  K  I  P  L  G  *  C  R  V  S  P  L  G  G  G  W  E  E   : G  H  E  Q  *  Y  L  Q  L  *  R  S  N  F  T  V  L  S  S  S  P  *  S  S  *  D  A  W  T  C  T  W  G  *  W  L  H  G  *  W  R  G  F  F  P  G  A  I  K  F  F  T  S  K  I  *  H  F  M  *  R  G  Q  G  W  K  Y  L  L  Q  Y  L  W  H  I  S  N  R  D  S   : *  Y  T  Q  P  C  C  L  Q  F  T  L  K  Q  Q  C  C  *  P  T  S  E  C  F  H  L  *   : G  G  L  V  Q  R  S  L  P  F  S  S  F  V  Q  W  G  A  D  H  R  *  G  *  S  R  *  R  T  S  W  V  T  W  L  S  L  L  S  P  Q  Y  F  N  I  F  Q  K  :  E  N  *  T  S  P  G  C  P  T  G  F  Q  H  *  R  S  E  *  S  H  P  D  I  T  I  S  H  V  *  N  M  V  R  C  Y  A  Y  I  S  R  E  V  Q  C  C  I  H  I  D  R  *  S  W :   T  *  L  Y  S  S  G  *  V  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57780" stop="57872"/>
                    <exon start="58765" stop="58842"/>
                    <exon start="59587" stop="59826"/>
                    <exon start="59956" stop="60036"/>
                    <exon start="60489" stop="60631"/>
                    <exon start="62803" stop="62963"/>
                    <exon start="63051" stop="63082"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>828</number_coding_nucleotides>
                  <number_encoded_amino_acids>276</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GKNITSICWRPDGKAIAVGLEDGTISLHDVENGKLLRNIKSHSADVVCLHWEEDGKKDMNSNTSSYEDRTSRFFPPPPRVPKMPGLVPGDSGFMDDGEDSFQELSNSSHQRYNILCSGDKDGSICFNIFGIFPIGTVNIHNLVVSSSLSSSNVASRLLNASICKVALSKDLCHLVVLCNGELITDEVDQGEGHHGLLGFHCLVLNTSIFSKRKTELHQVAQQASNIEDLSEVIRTSLSVMSKIWSDAMHTFHEKFNAVSTLIADHGLDSTPQDEFL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="69367" PGL_stop="70741"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69367" e_stop="69481"/>
            <exon e_start="69575" e_stop="69727"/>
            <exon e_start="69949" e_stop="70030"/>
            <exon e_start="70480" e_stop="70741"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.980" acc_prob="0.783" e_score="0.964"/>
          <exon-intron don_prob="0.988" acc_prob="0.929" e_score="0.974"/>
          <exon-intron don_prob="0.975" acc_prob="0.683" e_score="1.000"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.964">
            <gDNA_exon_boundary e_start="69367" e_stop="69481" e_length="115"/>
          </exon>
          <intron i_serial="1" don_prob="0.980" acc_prob="0.783">
            <gDNA_intron_boundary i_start="69482" i_stop="69574" i_length="93"/>
          </intron>
          <exon e_serial="2" e_score="0.974">
            <gDNA_exon_boundary e_start="69575" e_stop="69727" e_length="153"/>
          </exon>
          <intron i_serial="2" don_prob="0.988" acc_prob="0.929">
            <gDNA_intron_boundary i_start="69728" i_stop="69948" i_length="221"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="69949" e_stop="70030" e_length="82"/>
          </exon>
          <intron i_serial="3" don_prob="0.975" acc_prob="0.683">
            <gDNA_intron_boundary i_start="70031" i_stop="70479" i_length="449"/>
          </intron>
          <exon e_serial="4" e_score="0.985">
            <gDNA_exon_boundary e_start="70480" e_stop="70741" e_length="262"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69367" stop="69481"/>
              <exon start="69575" stop="69727"/>
              <exon start="69949" stop="70030"/>
              <exon start="70480" stop="70741"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E690702" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69370" stop="69481"/>
              <exon start="69575" stop="69727"/>
              <exon start="69949" stop="70030"/>
              <exon start="70480" stop="70739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E694542" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGTCAGGGGCCTTGCACGTGATTTGAGCAAAGTGGACAGTATACGTGATCCCATAGAAGCGGCCCTCTTATGTATTCCTGATGGATATCACTGTATTGATCTCTCGCTTTATAAA : GAGGGTCAAATTGTTTTACTATTAAACGAAACTGCAACCACTTCGGAGAGCTCTGGAAATGCTTTCATGATGATTCTACAAGCTGGTGACCTTTCATTTGTATCTCTTTCAAGATCTACCGCCCCCAATTCTTGGAAGCTTCACGAACTTCAG : GATTCTGCTATATACCTGCAACTGGAGAGTGAAAAGGTTCGAAGCATTCCTCATTCTGTGGTCTCTCCCTTGGCAGTTAGTG : CATCAAGAGGTGTAGCTTGTGTTTTTGCTGCAAGAAAGCGTGCTTTGGTTTACATCTTGGACGAAGATGAAGATGAAGTTTCTGATACAGAGTGACAGTACCTTGCTGTTCGCTGGGTCTTTTGCAGGATCTATCAATTTTGGGCAGATAAGCCAGTGTCTATCCCTTTTTACTAAATTGTAGACTCTTTGTACACTTCTAGTTAATAGTTATTAGTTGGATGATGTTAAAGCTGAAGAATCAACAAAATTCTACTTCACAT</gDNA_template>
            <first_frame> C  Q  G  P  C  T  *  F  E  Q  S  G  Q  Y  T  *  S  H  R  S  G  P  L  M  Y  S  *  W  I  S  L  Y  *  S  L  A  L  *   : R  G  S  N  C  F  T  I  K  R  N  C  N  H  F  G  E  L  W  K  C  F  H  D  D  S  T  S  W  *  P  F  I  C  I  S  F  K  I  Y  R  P  Q  F  L  E  A  S  R  T  S   : G  F  C  Y  I  P  A  T  G  E  *  K  G  S  K  H  S  S  F  C  G  L  S  L  G  S  *  C :   I  K  R  C  S  L  C  F  C  C  K  K  A  C  F  G  L  H  L  G  R  R  *  R  *  S  F  *  Y  R  V  T  V  P  C  C  S  L  G  L  L  Q  D  L  S  I  L  G  R  *  A  S  V  Y  P  F  L  L  N  C  R  L  F  V  H  F  *  L  I  V  I  S  W  M  M  L  K  L  K  N  Q  Q  N  S  T  S  H </first_frame>
            <second_frame>  V  R  G  L  A  R  D  L  S  K  V  D  S  I  R  D  P  I  E  A  A  L  L  C  I  P  D  G  Y  H  C  I  D  L  S  L  Y  K  :  E  G  Q  I  V  L  L  L  N  E  T  A  T  T  S  E  S  S  G  N  A  F  M  M  I  L  Q  A  G  D  L  S  F  V  S  L  S  R  S  T  A  P  N  S  W  K  L  H  E  L  Q  :  D  S  A  I  Y  L  Q  L  E  S  E  K  V  R  S  I  P  H  S  V  V  S  P  L  A  V  S   : A  S  R  G  V  A  C  V  F  A  A  R  K  R  A  L  V  Y  I  L  D  E  D  E  D  E  V  S  D  T  E  *  Q  Y  L  A  V  R  W  V  F  C  R  I  Y  Q  F  W  A  D  K  P  V  S  I  P  F  Y  *  I  V  D  S  L  Y  T  S  S  *  *  L  L  V  G  *  C  *  S  *  R  I  N  K  I  L  L  H   </second_frame>
            <third_frame>   S  G  A  L  H  V  I  *  A  K  W  T  V  Y  V  I  P  *  K  R  P  S  Y  V  F  L  M  D  I  T  V  L  I  S  R  F  I  K :   R  V  K  L  F  Y  Y  *  T  K  L  Q  P  L  R  R  A  L  E  M  L  S  *  *  F  Y  K  L  V  T  F  H  L  Y  L  F  Q  D  L  P  P  P  I  L  G  S  F  T  N  F  R :   I  L  L  Y  T  C  N  W  R  V  K  R  F  E  A  F  L  I  L  W  S  L  P  W  Q  L  V  :  H  Q  E  V  *  L  V  F  L  L  Q  E  S  V  L  W  F  T  S  W  T  K  M  K  M  K  F  L  I  Q  S  D  S  T  L  L  F  A  G  S  F  A  G  S  I  N  F  G  Q  I  S  Q  C  L  S  L  F  T  K  L  *  T  L  C  T  L  L  V  N  S  Y  *  L  D  D  V  K  A  E  E  S  T  K  F  Y  F  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69368" stop="69481"/>
                    <exon start="69575" stop="69727"/>
                    <exon start="69949" stop="70030"/>
                    <exon start="70480" stop="70574"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>441</number_coding_nucleotides>
                  <number_encoded_amino_acids>147</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VRGLARDLSKVDSIRDPIEAALLCIPDGYHCIDLSLYKEGQIVLLLNETATTSESSGNAFMMILQAGDLSFVSLSRSTAPNSWKLHELQDSAIYLQLESEKVRSIPHSVVSPLAVSASRGVACVFAARKRALVYILDEDEDEVSDTE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="78048" PGL_stop="70998"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="78048" e_stop="77751"/>
            <exon e_start="76627" e_stop="76552"/>
            <exon e_start="75706" e_stop="75648"/>
            <exon e_start="74767" e_stop="74274"/>
            <exon e_start="74187" e_stop="74027"/>
            <exon e_start="73931" e_stop="73728"/>
            <exon e_start="72920" e_stop="72683"/>
            <exon e_start="72084" e_stop="70998"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.931" e_score="0.993"/>
          <exon-intron don_prob="0.710" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.951" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.854" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.928" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="78048" e_stop="77751" e_length="298"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.931">
            <gDNA_intron_boundary i_start="77750" i_stop="76628" i_length="1123"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="76627" e_stop="76552" e_length="76"/>
          </exon>
          <intron i_serial="2" don_prob="0.710" acc_prob="1.000">
            <gDNA_intron_boundary i_start="76551" i_stop="75707" i_length="845"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="75706" e_stop="75648" e_length="59"/>
          </exon>
          <intron i_serial="3" don_prob="0.951" acc_prob="0.999">
            <gDNA_intron_boundary i_start="75647" i_stop="74768" i_length="880"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="74767" e_stop="74274" e_length="494"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.964">
            <gDNA_intron_boundary i_start="74273" i_stop="74188" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="74187" e_stop="74027" e_length="161"/>
          </exon>
          <intron i_serial="5" don_prob="0.854" acc_prob="1.000">
            <gDNA_intron_boundary i_start="74026" i_stop="73932" i_length="95"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="73931" e_stop="73728" e_length="204"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.928">
            <gDNA_intron_boundary i_start="73727" i_stop="72921" i_length="807"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="72920" e_stop="72683" e_length="238"/>
          </exon>
          <intron i_serial="7" don_prob="0.968" acc_prob="0.994">
            <gDNA_intron_boundary i_start="72682" i_stop="72085" i_length="598"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="72084" e_stop="70998" e_length="1087"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78048" stop="77751"/>
              <exon start="76627" stop="76552"/>
              <exon start="75706" stop="75648"/>
              <exon start="74767" stop="74683"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331683" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77974" stop="77751"/>
              <exon start="76627" stop="76552"/>
              <exon start="75706" stop="75648"/>
              <exon start="74767" stop="74274"/>
              <exon start="74187" stop="74027"/>
              <exon start="73931" stop="73728"/>
              <exon start="72920" stop="72683"/>
              <exon start="72084" stop="71082"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75691" stop="75648"/>
              <exon start="74767" stop="74444"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279167" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74755" stop="74274"/>
              <exon start="74187" stop="74027"/>
              <exon start="73931" stop="73832"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332029" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74052" stop="74027"/>
              <exon start="73931" stop="73728"/>
              <exon start="72920" stop="72683"/>
              <exon start="72084" stop="71888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74032" stop="74027"/>
              <exon start="73931" stop="73728"/>
              <exon start="72920" stop="72683"/>
              <exon start="72084" stop="71980"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278739" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73882" stop="73728"/>
              <exon start="72920" stop="72683"/>
              <exon start="72084" stop="71892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73882" stop="73728"/>
              <exon start="72920" stop="72683"/>
              <exon start="72084" stop="72031"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255169" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73848" stop="73728"/>
              <exon start="72920" stop="72683"/>
              <exon start="72084" stop="71675"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344977" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72876" stop="72683"/>
              <exon start="72084" stop="71675"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72876" stop="72683"/>
              <exon start="72084" stop="71675"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256298" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72867" stop="72683"/>
              <exon start="72084" stop="71658"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264681" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72863" stop="72683"/>
              <exon start="72084" stop="71839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252060" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72714" stop="72683"/>
              <exon start="72084" stop="71526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709353" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72707" stop="72683"/>
              <exon start="72084" stop="71659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204052" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71480" stop="70998"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549124" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71480" stop="70998"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71473" stop="70998"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309425" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCTTCTTTCTTCTTTCAATTTTTTTCCCGCTTTCCCCTTTTTTCGCTCCTTTTTCTCACTTTCTTCTATCCACTGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAG : TGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTT : GTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAG : GGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCCAGCTGGATCAGAAGCAGAAAGTTCAGGCTAGGCTTAAAGGTGGCATCAGGTTGCTGTGAGGGAATCCGCATTCGTGAGGCAAAAACAGATGCCTTCACTGTCAAGGATCATAGAGGAGAAT : TGTACAAGAAACATTATCCACCTGCATTAGATGATGAAGTTTGGAGATTGGAAAAGATAGGGAAAGATGGATCCTTCCACAAGAGGCTAAATAAAGCTGGCATACATAAAGTGGAAGACTTTCTGCGTCTTGTTGTGAGAGACTCGCAGAGGCTCCGAAAT : GTCCTGGGAAGTGGAATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAG : ATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG : GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGATGAGGAACGTACACGTTCTTCAGGTAAGGCTGTTGTAGGGTGGCTCAAACTCAAAGCTGCCTTGAGATGGGGCATTTTCATAAGGAAGAAAGCTGCAGAAAGAAGAGCACAAATTACTGAACTGGATGACTCTTAGATTTGATTTTCCCCTTAGCAACCACTTGGATATGATGTGTAAGGGCTTTCCTCTAAGAAGCATATTATCGATCTTGGAATTTGGTTTGACAATCCATATGCATCTGGTGCTGGGTTGGGCTCAATCTGAACCTAGGAGCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGATTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTCATAGAAACATTTGTTGTGAACATATCATTAAAATGTGATGTGGTAAACCTTCAAAAATTTGTTATATTGAACGAATAATCTTGT</gDNA_template>
            <first_frame> I  F  F  L  L  S  I  F  F  P  L  S  P  F  F  A  P  F  S  H  F  L  L  S  T  E  K  K  R  R  K  F  *  V  S  L  Y  E  T  D  C  *  I  I  K  Q  R  K  K  K  E  T  L  D  Q  I  *  K  F  E  Q  E  E  C  F  N  S  Q  R  K  C  R  Q  G  I  W  R  N  V  F  W  I  Q  V  V  V  R  K  V  N  L  I  G  K  D  L  L  L  Q   : V  S  L  L  K  R  *  R  W  T  V  C  K  N  S  A  H  H  W  S  Q  F  F  E  E  L :   L  V  K  K  W  S  V  L  W  L  N  L  D  L  L  N  L  M  Q   : G  F  R  Q  K  E  L  K  D  L  M  G  E  I  C  S  F  S  F  G  P  N  C  H  Y  L  S  S  L  E  E  K  *  K  E  S  R  V  P  Q  Y  I  L  S  *  L  M  E  I  Q  T  M  L  *  H  Q  V  P  S  P  W  L  S  *  M  L  L  C  L  K  E  I  L  T  M  R  M  M  M  A  G  L  K  K  N  L  S  L  I  S  S  R  S  V  K  A  R  G  L  S  L  L  E  N  C  K  *  Y  *  R  K  V  L  A  P  L  A  S  *  H  L  L  T  T  P  A  G  S  E  A  E  S  S  G  *  A  *  R  W  H  Q  V  A  V  R  E  S  A  F  V  R  Q  K  Q  M  P  S  L  S  R  I  I  E  E  N  :  C  T  R  N  I  I  H  L  H  *  M  M  K  F  G  D  W  K  R  *  G  K  M  D  P  S  T  R  G  *  I  K  L  A  Y  I  K  W  K  T  F  C  V  L  L  *  E  T  R  R  G  S  E  M :   S  W  E  V  E  C  Q  I  K  C  G  M  L  F  W  T  M  Q  K  P  V  Y  *  V  G  S  Y  M  S  T  I  L  M  I  *  E  M  S  V  L  F  L  I  I  S  M  N  Y  V  V  *  S  L  A  D  S  I  I  Q  W  I  L  F  Q  T  I  R  R :   Y  M  W  I  L  *  L  R  R  R  M  T  T  G  C  K  L  L  S  M  M  E  N  L  S  *  A  W  A  R  I  K  P  Q  F  R  L  K  M  I  L  Q  L  A  L  R  T  I  Q  S  L  L  I  N  K  L  I  Y  Q  V  F  Q  L  Q  Y  H  Q  S  S  L  L  *  I  Q  D  *  T  W  E  :  G  I  M  I  A  S  V  A  D  T  L  C  S  L  R  T  *  I  *  M  A  T  C  S  *  M  V  L  R  F  L  R  T  I  C  S  A  R  H  N  K  L  S  R  M  G  V  I  A  C  W  P  F  A  H  H  S  H  Q  C  L  A  I  L  L  L  A  R  L  I  L  I  R  E  L  R  T  S  *  Q  R  K  R  Y  V  *  K  V  M  R  C  S  K  M  K  T  C  N  I  C  Y  V  C  S  A  W  D  R  V  M  R  L  L  V  L  Q  K  R  I  T  S  M  D  Q  H  T  C  P  A  C  L  L  I  L  V  L  M  R  N  V  H  V  L  Q  V  R  L  L  *  G  G  S  N  S  K  L  P  *  D  G  A  F  S  *  G  R  K  L  Q  K  E  E  H  K  L  L  N  W  M  T  L  R  F  D  F  P  L  S  N  H  L  D  M  M  C  K  G  F  P  L  R  S  I  L  S  I  L  E  F  G  L  T  I  H  M  H  L  V  L  G  W  A  Q  S  E  P  R  S  L  L  *  C  T  V  M  P  V  H  G  D  C  S  L  S  I  N  R  I  T  *  A  Y  D  S  S  L  S  I  L  Y  A  V  Q  R  L  E  Q  F  S  W  L  *  L  K  G  N  S  H  G  L  D  L  I  S  S  T  R  D  *  R  K  *  L  H  L  P  C  A  N  S  R  L  *  Q  V  C  F  D  E  L  C  L  T  D  A  V  I  F  S  V  L  L  *  *  V  Y  Q  K  K  T  *  Y  L  S  H  R  N  I  C  C  E  H  I  I  K  M  *  C  G  K  P  S  K  I  C  Y  I  E  R  I  I  L  </first_frame>
            <second_frame>  S  S  F  F  F  Q  F  F  S  R  F  P  L  F  S  L  L  F  L  T  F  F  Y  P  L  R  K  K  E  E  N  F  E  S  H  Y  T  K  Q  T  V  E  *  S  N  K  E  K  R  K  K  L  *  I  R  S  E  N  L  N  K  R  S  V  L  I  V  K  E  N  A  D  K  V  Y  G  E  T  C  F  G  S  K  *  *  *  G  R  S  T  *  *  E  K  T  C  S  C  K  :  C  H  C  *  S  A  K  G  G  Q  S  A  K  T  L  L  I  T  G  A  N  S  S  K  S   : C  *  *  R  S  G  A  C  F  G  *  T  W  T  C  *  T  *  C  K  :  G  F  A  K  K  N  *  R  T  *  W  E  K  F  A  A  S  V  S  V  Q  T  V  T  T  S  L  H  W  R  K  S  R  R  R  A  G  F  R  N  T  Y  C  L  D  *  W  K  Y  K  P  C  C  N  I  R  S  R  V  L  G  *  V  R  C  C  C  A  *  R  R  F  *  Q  *  G  *  *  W  L  D  S  R  R  I  *  V  S  Y  R  Q  G  A  *  R  Q  E  A  S  P  Y  W  R  I  A  S  D  I  E  G  R  C  W  H  P  W  R  V  D  I  Y  *  Q  L  Q  L  D  Q  K  Q  K  V  Q  A  R  L  K  G  G  I  R  L  L  *  G  N  P  H  S  *  G  K  N  R  C  L  H  C  Q  G  S  *  R  R  I :   V  Q  E  T  L  S  T  C  I  R  *  *  S  L  E  I  G  K  D  R  E  R  W  I  L  P  Q  E  A  K  *  S  W  H  T  *  S  G  R  L  S  A  S  C  C  E  R  L  A  E  A  P  K   : C  P  G  K  W  N  V  K  *  N  V  G  C  S  S  G  P  C  K  N  L  C  T  K  W  E  A  I  C  L  L  S  *  *  Y  E  K  C  R  C  C  F  *  *  Y  L  *  I  M  W  F  N  L  W  R  T  V  S  F  N  G  F  S  F  R  Q  S  E   : D  I  C  G  Y  F  S  *  E  G  V  *  Q  L  D  A  S  C  *  V  *  W  K  I  S  P  K  P  G  P  E  *  S  R  S  F  V  S  K  *  S  Y  N  W  L  S  E  P  Y  N  L  F  *  S  T  N  *  S  T  K  S  S  S  F  N  I  I  R  A  A  F  Y  E  F  R  T  E  H  G  R :   V  *  *  *  P  Q  W  Q  I  H  Y  A  A  S  E  H  E  S  K  W  Q  H  A  V  K  W  C  F  V  S  S  E  P  F  A  R  H  V  T  T  S  S  A  A  W  E  *  *  H  A  G  P  S  P  T  T  A  I  N  V  *  L  F  C  C  *  H  A  *  S  L  *  G  S  *  G  L  L  N  R  G  R  D  T  Y  E  K  S  *  D  A  R  K  *  R  H  A  T  F  A  T  Y  V  Q  H  G  T  G  S  C  V  F  *  C  C  R  R  E  L  P  V  W  I  S  I  H  A  Q  H  V  F  *  F  W  F  *  *  G  T  Y  T  F  F  R  *  G  C  C  R  V  A  Q  T  Q  S  C  L  E  M  G  H  F  H  K  E  E  S  C  R  K  K  S  T  N  Y  *  T  G  *  L  L  D  L  I  F  P  L  A  T  T  W  I  *  C  V  R  A  F  L  *  E  A  Y  Y  R  S  W  N  L  V  *  Q  S  I  C  I  W  C  W  V  G  L  N  L  N  L  G  A  S  Y  N  V  Q  L  C  L  S  M  E  I  A  L  S  P  L  T  E  *  H  K  L  M  I  V  L  S  A  Y  Y  M  Q  F  K  D  W  S  S  F  H  G  S  S  *  R  E  I  P  M  V  *  T  *  F  L  L  L  G  T  E  G  S  D  F  I  C  L  V  L  T  Q  D  C  S  K  Y  V  L  M  S  Y  V  *  L  M  L  *  F  L  V  F  C  C  N  E  F  I  K  R  K  H  N  I  C  L  I  E  T  F  V  V  N  I  S  L  K  C  D  V  V  N  L  Q  K  F  V  I  L  N  E  *  S  C </second_frame>
            <third_frame>   L  L  S  S  F  N  F  F  P  A  F  P  F  F  R  S  F  F  S  L  S  S  I  H  *  E  K  K  K  K  I  L  S  L  T  I  R  N  R  L  L  N  N  Q  T  K  K  K  E  R  N  F  R  S  D  L  K  I  *  T  R  G  V  F  *  *  S  K  K  M  Q  T  R  Y  M  E  K  R  V  L  D  P  S  S  S  E  E  G  Q  P  D  R  K  R  P  A  L  A  S :   V  I  V  E  A  L  K  V  D  S  L  Q  K  L  C  S  S  L  E  P  I  L  R  R  V  :  V  S  E  E  V  E  R  A  L  A  K  L  G  P  A  K  L  N  A  R :   V  S  P  K  R  I  E  G  P  D  G  R  N  L  Q  L  Q  F  R  S  K  L  S  L  P  L  F  T  G  G  K  V  E  G  E  Q  G  S  A  I  H  I  V  L  I  D  G  N  T  N  H  V  V  T  S  G  P  E  S  L  V  K  L  D  V  V  V  L  E  G  D  F  N  N  E  D  D  D  G  W  T  Q  E  E  F  E  S  H  I  V  K  E  R  E  G  K  R  P  L  L  T  G  E  L  Q  V  I  L  K  E  G  V  G  T  L  G  E  L  T  F  T  D  N  S  S  W  I  R  S  R  K  F  R  L  G  L  K  V  A  S  G  C  C  E  G  I  R  I  R  E  A  K  T  D  A  F  T  V  K  D  H  R  G  E   : L  Y  K  K  H  Y  P  P  A  L  D  D  E  V  W  R  L  E  K  I  G  K  D  G  S  F  H  K  R  L  N  K  A  G  I  H  K  V  E  D  F  L  R  L  V  V  R  D  S  Q  R  L  R  N  :  V  L  G  S  G  M  S  N  K  M  W  D  A  L  L  D  H  A  K  T  C  V  L  S  G  K  L  Y  V  Y  Y  P  D  D  M  R  N  V  G  V  V  F  N  N  I  Y  E  L  C  G  L  I  S  G  G  Q  Y  H  S  M  D  S  L  S  D  N  Q  K  :  I  Y  V  D  T  L  V  K  K  A  Y  D  N  W  M  Q  V  V  E  Y  D  G  K  S  L  L  S  L  G  Q  N  K  A  A  V  S  S  Q  N  D  P  T  I  G  S  Q  N  H  T  I  S  F  D  Q  Q  T  N  L  P  S  L  P  A  S  I  S  S  E  Q  P  S  M  N  S  G  L  N  M  G   : G  Y  N  D  S  L  S  G  R  Y  T  M  Q  P  Q  N  M  N  L  N  G  N  M  Q  L  N  G  A  S  F  P  Q  N  H  L  L  G  T  S  Q  Q  A  Q  P  H  G  S  D  S  M  L  A  L  R  P  P  Q  P  S  M  S  S  Y  F  A  A  S  T  P  N  P  Y  K  G  A  E  D  F  L  T  E  E  E  I  R  M  K  S  H  E  M  L  E  N  E  D  M  Q  H  L  L  R  M  F  S  M  G  Q  G  H  A  S  S  S  V  A  E  E  N  Y  Q  Y  G  S  A  Y  M  P  S  M  S  S  N  F  G  F  D  E  E  R  T  R  S  S  G  K  A  V  V  G  W  L  K  L  K  A  A  L  R  W  G  I  F  I  R  K  K  A  A  E  R  R  A  Q  I  T  E  L  D  D  S  *  I  *  F  S  P  *  Q  P  L  G  Y  D  V  *  G  L  S  S  K  K  H  I  I  D  L  G  I  W  F  D  N  P  Y  A  S  G  A  G  L  G  S  I  *  T  *  E  P  L  I  M  Y  S  Y  A  C  P  W  R  L  L  S  L  H  *  Q  N  N  I  S  L  *  *  F  S  Q  H  I  I  C  S  S  K  T  G  A  V  F  M  A  L  A  E  G  K  F  P  W  F  R  P  D  F  F  Y  *  G  L  K  E  V  T  S  F  A  L  C  *  L  K  I  V  A  S  M  F  *  *  V  M  F  D  *  C  C  N  F  *  C  F  V  V  M  S  L  S  K  E  N  I  I  F  V  S  *  K  H  L  L  *  T  Y  H  *  N  V  M  W  *  T  F  K  N  L  L  Y  *  T  N  N  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77848" stop="77751"/>
                    <exon start="76627" stop="76552"/>
                    <exon start="75706" stop="75648"/>
                    <exon start="74767" stop="74274"/>
                    <exon start="74187" stop="74027"/>
                    <exon start="73931" stop="73728"/>
                    <exon start="72920" stop="72683"/>
                    <exon start="72084" stop="71540"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1872</number_coding_nucleotides>
                  <number_encoded_amino_acids>624</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKKMQTRYMEKRVLDPSSSEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLNARVSPKRIEGPDGRNLQLQFRSKLSLPLFTGGKVEGEQGSAIHIVLIDGNTNHVVTSGPESLVKLDVVVLEGDFNNEDDDGWTQEEFESHIVKEREGKRPLLTGELQVILKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGCCEGIRIREAKTDAFTVKDHRGELYKKHYPPALDDEVWRLEKIGKDGSFHKRLNKAGIHKVEDFLRLVVRDSQRLRNVLGSGMSNKMWDALLDHAKTCVLSGKLYVYYPDDMRNVGVVFNNIYELCGLISGGQYHSMDSLSDNQKIYVDTLVKKAYDNWMQVVEYDGKSLLSLGQNKAAVSSQNDPTIGSQNHTISFDQQTNLPSLPASISSEQPSMNSGLNMGGYNDSLSGRYTMQPQNMNLNGNMQLNGASFPQNHLLGTSQQAQPHGSDSMLALRPPQPSMSSYFAASTPNPYKGAEDFLTEEEIRMKSHEMLENEDMQHLLRMFSMGQGHASSSVAEENYQYGSAYMPSMSSNFGFDEERTRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQITELDDS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="82990" PGL_stop="85869"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82990" e_stop="83077"/>
            <exon e_start="83174" e_stop="83274"/>
            <exon e_start="84135" e_stop="84207"/>
            <exon e_start="84634" e_stop="84720"/>
            <exon e_start="84834" e_stop="84911"/>
            <exon e_start="85042" e_stop="85112"/>
            <exon e_start="85637" e_stop="85869"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.985" acc_prob="0.707" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.810" acc_prob="0.849" e_score="1.000"/>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="82990" e_stop="83077" e_length="88"/>
          </exon>
          <intron i_serial="1" don_prob="0.985" acc_prob="0.707">
            <gDNA_intron_boundary i_start="83078" i_stop="83173" i_length="96"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="83174" e_stop="83274" e_length="101"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.989">
            <gDNA_intron_boundary i_start="83275" i_stop="84134" i_length="860"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="84135" e_stop="84207" e_length="73"/>
          </exon>
          <intron i_serial="3" don_prob="0.984" acc_prob="1.000">
            <gDNA_intron_boundary i_start="84208" i_stop="84633" i_length="426"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="84634" e_stop="84720" e_length="87"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="84721" i_stop="84833" i_length="113"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="84834" e_stop="84911" e_length="78"/>
          </exon>
          <intron i_serial="5" don_prob="0.972" acc_prob="0.992">
            <gDNA_intron_boundary i_start="84912" i_stop="85041" i_length="130"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="85042" e_stop="85112" e_length="71"/>
          </exon>
          <intron i_serial="6" don_prob="0.810" acc_prob="0.849">
            <gDNA_intron_boundary i_start="85113" i_stop="85636" i_length="524"/>
          </intron>
          <exon e_serial="7" e_score="0.966">
            <gDNA_exon_boundary e_start="85637" e_stop="85869" e_length="233"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82990" stop="83077"/>
              <exon start="83174" stop="83274"/>
              <exon start="84135" stop="84207"/>
              <exon start="84634" stop="84720"/>
              <exon start="84834" stop="84911"/>
              <exon start="85042" stop="85112"/>
              <exon start="85637" stop="85869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344187" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATGGAGGAAGCCGATCTGCACCCAAAGTATTTAGTGACGATGTAAAGCCCCTGCTAGAGGATGCAAATATTCACTATACACTGCAAG : AAACTAAATATCGGTTACATGCAAAGGAAGTTGCTCATTCGTTGGATCTTTTGCGATATGATGGAGTTCTTTGTGTCAGTGGTGATGGAATTTTGGTTGAG : GTAGTGAATGGACTGCTTGAAAGGGAGGATTGGAGTACTGCAATAAAGATGCCTCTTGGAGTAATACCCGCAG : GAACTTCAAATGGGATGGCCAAGTCTCTTCTAGATTCTGTTGGTGAATCTTGTACTGCATTTAATGCAACTCTTGCTATAATCAGAG : GCCACAAGAGATCACTAGATGTAGCTACAGTTTTACAGGGGCAGAAAAAATATTTCAGTGTGCTGATGCTTGCCTGGG : GTCTTATAGCTGATATAGATATAGAGTCTGAGAAGTATAGGTGGATGGGTAGTGCTCGAATGGATTTTTAT : GCAATACAGCGGATATTTTGTCTTAGAAAGTATCATGGCTGTATCAAATTTGTGGCTGCACCAGGGTTTTGAAAATTTTGGAGAACCAAATGAACTTGGAGGTGAAATTGATGAGCTTAACTCGAATTTGGTTATGCAAGATGGCTATTGTGGTCCCACTTTTGACATGAAGGGTTTCAACCGCAAGATTGAGGGGCCTTTTGTCTCAATCTGGCTTCATAATGTACCTTGGG</gDNA_template>
            <first_frame> Y  G  G  S  R  S  A  P  K  V  F  S  D  D  V  K  P  L  L  E  D  A  N  I  H  Y  T  L  Q   : E  T  K  Y  R  L  H  A  K  E  V  A  H  S  L  D  L  L  R  Y  D  G  V  L  C  V  S  G  D  G  I  L  V  E  :  V  V  N  G  L  L  E  R  E  D  W  S  T  A  I  K  M  P  L  G  V  I  P  A   : G  T  S  N  G  M  A  K  S  L  L  D  S  V  G  E  S  C  T  A  F  N  A  T  L  A  I  I  R   : G  H  K  R  S  L  D  V  A  T  V  L  Q  G  Q  K  K  Y  F  S  V  L  M  L  A  W   : G  L  I  A  D  I  D  I  E  S  E  K  Y  R  W  M  G  S  A  R  M  D  F  Y  :  A  I  Q  R  I  F  C  L  R  K  Y  H  G  C  I  K  F  V  A  A  P  G  F  *  K  F  W  R  T  K  *  T  W  R  *  N  *  *  A  *  L  E  F  G  Y  A  R  W  L  L  W  S  H  F  *  H  E  G  F  Q  P  Q  D  *  G  A  F  C  L  N  L  A  S  *  C  T  L   </first_frame>
            <second_frame>  M  E  E  A  D  L  H  P  K  Y  L  V  T  M  *  S  P  C  *  R  M  Q  I  F  T  I  H  C  K  :  K  L  N  I  G  Y  M  Q  R  K  L  L  I  R  W  I  F  C  D  M  M  E  F  F  V  S  V  V  M  E  F  W  L  R :   *  *  M  D  C  L  K  G  R  I  G  V  L  Q  *  R  C  L  L  E  *  Y  P  Q  :  E  L  Q  M  G  W  P  S  L  F  *  I  L  L  V  N  L  V  L  H  L  M  Q  L  L  L  *  S  E  :  A  T  R  D  H  *  M  *  L  Q  F  Y  R  G  R  K  N  I  S  V  C  *  C  L  P  G  :  V  L  *  L  I  *  I  *  S  L  R  S  I  G  G  W  V  V  L  E  W  I  F  M :   Q  Y  S  G  Y  F  V  L  E  S  I  M  A  V  S  N  L  W  L  H  Q  G  F  E  N  F  G  E  P  N  E  L  G  G  E  I  D  E  L  N  S  N  L  V  M  Q  D  G  Y  C  G  P  T  F  D  M  K  G  F  N  R  K  I  E  G  P  F  V  S  I  W  L  H  N  V  P  W  </second_frame>
            <third_frame>   W  R  K  P  I  C  T  Q  S  I  *  *  R  C  K  A  P  A  R  G  C  K  Y  S  L  Y  T  A  R :   N  *  I  S  V  T  C  K  G  S  C  S  F  V  G  S  F  A  I  *  W  S  S  L  C  Q  W  *  W  N  F  G  *   : G  S  E  W  T  A  *  K  G  G  L  E  Y  C  N  K  D  A  S  W  S  N  T  R  R :   N  F  K  W  D  G  Q  V  S  S  R  F  C  W  *  I  L  Y  C  I  *  C  N  S  C  Y  N  Q  R :   P  Q  E  I  T  R  C  S  Y  S  F  T  G  A  E  K  I  F  Q  C  A  D  A  C  L  G :   S  Y  S  *  Y  R  Y  R  V  *  E  V  *  V  D  G  *  C  S  N  G  F  L   : C  N  T  A  D  I  L  S  *  K  V  S  W  L  Y  Q  I  C  G  C  T  R  V  L  K  I  L  E  N  Q  M  N  L  E  V  K  L  M  S  L  T  R  I  W  L  C  K  M  A  I  V  V  P  L  L  T  *  R  V  S  T  A  R  L  R  G  L  L  S  Q  S  G  F  I  M  Y  L  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82990" stop="83077"/>
                    <exon start="83174" stop="83274"/>
                    <exon start="84135" stop="84207"/>
                    <exon start="84634" stop="84720"/>
                    <exon start="84834" stop="84911"/>
                    <exon start="85042" stop="85112"/>
                    <exon start="85637" stop="85708"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>567</number_coding_nucleotides>
                  <number_encoded_amino_acids>189</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YGGSRSAPKVFSDDVKPLLEDANIHYTLQETKYRLHAKEVAHSLDLLRYDGVLCVSGDGILVEVVNGLLEREDWSTAIKMPLGVIPAGTSNGMAKSLLDSVGESCTAFNATLAIIRGHKRSLDVATVLQGQKKYFSVLMLAWGLIADIDIESEKYRWMGSARMDFYAIQRIFCLRKYHGCIKFVAAPGF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="100548" PGL_stop="102940"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="100548" e_stop="100617"/>
            <exon e_start="101486" e_stop="101556"/>
            <exon e_start="101684" e_stop="102940"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.944" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.918" acc_prob="0.942" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="100548" e_stop="100617" e_length="70"/>
          </exon>
          <intron i_serial="1" don_prob="0.944" acc_prob="0.997">
            <gDNA_intron_boundary i_start="100618" i_stop="101485" i_length="868"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="101486" e_stop="101556" e_length="71"/>
          </exon>
          <intron i_serial="2" don_prob="0.918" acc_prob="0.942">
            <gDNA_intron_boundary i_start="101557" i_stop="101683" i_length="127"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="101684" e_stop="102940" e_length="1257"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100548" stop="100617"/>
              <exon start="101486" stop="101556"/>
              <exon start="101684" stop="102175"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314839" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101765" stop="102470"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102070" stop="102940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E555621" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102070" stop="102930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553095" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAAGTTCCTGACAATGTTGACCTTCCATCGAGATGGACTTGTTCAGACAACTCATGCGACCCCGAGAG : GTCTGTGTGCTCAGCAGTTCAAGAATTAACAGCAGATCATCTGAGGGACCTACTACCTCATATTAATAAAG : CTTCCAAGAAAAGGAAGGCTTCTAAACAGGAAATGGACTTGGTTGAAACTCTGGATGGGCTTGATGCCCTTGCTCATCTAGCTATCCTAGAAGAGGGAGAGACCCTTCCAGCATCACCACAGGCCACAACTAAGCATCCACGTCATAGACCTGGGTGTACATGCATTGTCTGCATCCAGCCCCCTAGTGGAAAAGGTCCTAAGCACAAGCAATCATGTGATTGTAACGTCTGTAAATCAGTAAAGCGTCGTTTCAAAACATTGATGATGAAGCGTGAAAAAAAGTTATCAGAGAAAGAAGCAGAAGCTACTTGTCAAAAGCTGCAGCCGCAATCAGCTGGGCAATTGCTTGATGCTGATGACATTCAAGAACCTATTGATGATGCAGTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATGAGAAGAAATCTTCAGTTGATGACACAAATTACCTTAGTGAGAAGATATCTTCTGTTGATGACCCCAGCTACCTTAATGAGAAGGAATCTTCTGTTGATGATCCCAACATCCTGAATGAGAAGAAATCTTCTGTTGATGATCCTAACTGCCTGAATGAGAAGAAATCTGCTGTTGATGATCCCAACTACGTGGATGAGAGGAAATCTTCTGTTGATGATCCCAATTGCCTTAAGGAGAAGAAATCTTCTGCTTCACCATTTAAAGGTGAATTTGACCTGAATGCTAAGCCAGATAGGGACGACGAGCTTTCACCAGGCTCTGATTCTGGTAGCATGATGCGCATGATCAAACGTGCTGCTGAGCAATATGTCAGGCACTGTGATAATGGAAGTTCCGTGGGTAACCAAAGAGATGGAGATGGTGCTGGGGAGACAAATCCGGGTAATTGTGTTATTGTTAGTGGTAGTCATCAAGCTGATGTAGATCATAATAGGCCTTTACCCATAAGCGCTGCTGCATCTTTGGCACCTAATGACCAGTAAGTTGCTCCCTACATGAGGCACCTAAATTAGCTGTGCTATATTAAAAACCAGAGGTACTCCGCAGTGTATGGAAATTTGTACATTTTGGCTTTGCTGGCGTCATGCATTGTACATAGATAGACGTAGCAAGTAGCAACTGATGTAATCTTTCTGCAATCCACAGGTTGCATTTTGCAATGGCCGCGAGGTGCCTTACATATTTATTATATAAATGGCTGGAAAG</gDNA_template>
            <first_frame> E  K  F  L  T  M  L  T  F  H  R  D  G  L  V  Q  T  T  H  A  T  P  R   : G  L  C  A  Q  Q  F  K  N  *  Q  Q  I  I  *  G  T  Y  Y  L  I  L  I  K  :  L  P  R  K  G  R  L  L  N  R  K  W  T  W  L  K  L  W  M  G  L  M  P  L  L  I  *  L  S  *  K  R  E  R  P  F  Q  H  H  H  R  P  Q  L  S  I  H  V  I  D  L  G  V  H  A  L  S  A  S  S  P  L  V  E  K  V  L  S  T  S  N  H  V  I  V  T  S  V  N  Q  *  S  V  V  S  K  H  *  *  *  S  V  K  K  S  Y  Q  R  K  K  Q  K  L  L  V  K  S  C  S  R  N  Q  L  G  N  C  L  M  L  M  T  F  K  N  L  L  M  M  Q  C  I  Q  A  L  S  M  K  S  *  T  L  K  V  L  L  I  P  I  T  L  M  R  R  N  L  L  L  R  I  P  I  T  L  M  R  R  N  L  Q  L  M  T  Q  I  T  L  V  R  R  Y  L  L  L  M  T  P  A  T  L  M  R  R  N  L  L  L  M  I  P  T  S  *  M  R  R  N  L  L  L  M  I  L  T  A  *  M  R  R  N  L  L  L  M  I  P  T  T  W  M  R  G  N  L  L  L  M  I  P  I  A  L  R  R  R  N  L  L  L  H  H  L  K  V  N  L  T  *  M  L  S  Q  I  G  T  T  S  F  H  Q  A  L  I  L  V  A  *  C  A  *  S  N  V  L  L  S  N  M  S  G  T  V  I  M  E  V  P  W  V  T  K  E  M  E  M  V  L  G  R  Q  I  R  V  I  V  L  L  L  V  V  V  I  K  L  M  *  I  I  I  G  L  Y  P  *  A  L  L  H  L  W  H  L  M  T  S  K  L  L  P  T  *  G  T  *  I  S  C  A  I  L  K  T  R  G  T  P  Q  C  M  E  I  C  T  F  W  L  C  W  R  H  A  L  Y  I  D  R  R  S  K  *  Q  L  M  *  S  F  C  N  P  Q  V  A  F  C  N  G  R  E  V  P  Y  I  F  I  I  *  M  A  G  K </first_frame>
            <second_frame>  K  S  S  *  Q  C  *  P  S  I  E  M  D  L  F  R  Q  L  M  R  P  R  E  :  V  C  V  L  S  S  S  R  I  N  S  R  S  S  E  G  P  T  T  S  Y  *  *  S :   F  Q  E  K  E  G  F  *  T  G  N  G  L  G  *  N  S  G  W  A  *  C  P  C  S  S  S  Y  P  R  R  G  R  D  P  S  S  I  T  T  G  H  N  *  A  S  T  S  *  T  W  V  Y  M  H  C  L  H  P  A  P  *  W  K  R  S  *  A  Q  A  I  M  *  L  *  R  L  *  I  S  K  A  S  F  Q  N  I  D  D  E  A  *  K  K  V  I  R  E  R  S  R  S  Y  L  S  K  A  A  A  A  I  S  W  A  I  A  *  C  *  *  H  S  R  T  Y  *  *  C  S  A  F  K  P  S  A  *  R  A  E  H  *  R  F  C  *  S  Q  L  P  *  *  E  E  I  F  C  *  G  S  Q  L  P  *  *  E  E  I  F  S  *  *  H  K  L  P  *  *  E  D  I  F  C  *  *  P  Q  L  P  *  *  E  G  I  F  C  *  *  S  Q  H  P  E  *  E  E  I  F  C  *  *  S  *  L  P  E  *  E  E  I  C  C  *  *  S  Q  L  R  G  *  E  E  I  F  C  *  *  S  Q  L  P  *  G  E  E  I  F  C  F  T  I  *  R  *  I  *  P  E  C  *  A  R  *  G  R  R  A  F  T  R  L  *  F  W  *  H  D  A  H  D  Q  T  C  C  *  A  I  C  Q  A  L  *  *  W  K  F  R  G  *  P  K  R  W  R  W  C  W  G  D  K  S  G  *  L  C  Y  C  *  W  *  S  S  S  *  C  R  S  *  *  A  F  T  H  K  R  C  C  I  F  G  T  *  *  P  V  S  C  S  L  H  E  A  P  K  L  A  V  L  Y  *  K  P  E  V  L  R  S  V  W  K  F  V  H  F  G  F  A  G  V  M  H  C  T  *  I  D  V  A  S  S  N  *  C  N  L  S  A  I  H  R  L  H  F  A  M  A  A  R  C  L  T  Y  L  L  Y  K  W  L  E   </second_frame>
            <third_frame>   K  V  P  D  N  V  D  L  P  S  R  W  T  C  S  D  N  S  C  D  P  E  R :   S  V  C  S  A  V  Q  E  L  T  A  D  H  L  R  D  L  L  P  H  I  N  K   : A  S  K  K  R  K  A  S  K  Q  E  M  D  L  V  E  T  L  D  G  L  D  A  L  A  H  L  A  I  L  E  E  G  E  T  L  P  A  S  P  Q  A  T  T  K  H  P  R  H  R  P  G  C  T  C  I  V  C  I  Q  P  P  S  G  K  G  P  K  H  K  Q  S  C  D  C  N  V  C  K  S  V  K  R  R  F  K  T  L  M  M  K  R  E  K  K  L  S  E  K  E  A  E  A  T  C  Q  K  L  Q  P  Q  S  A  G  Q  L  L  D  A  D  D  I  Q  E  P  I  D  D  A  V  H  S  S  P  Q  H  E  E  L  N  I  E  G  S  V  D  P  N  Y  L  N  E  K  K  S  S  V  E  D  P  N  Y  L  D  E  K  K  S  S  V  D  D  T  N  Y  L  S  E  K  I  S  S  V  D  D  P  S  Y  L  N  E  K  E  S  S  V  D  D  P  N  I  L  N  E  K  K  S  S  V  D  D  P  N  C  L  N  E  K  K  S  A  V  D  D  P  N  Y  V  D  E  R  K  S  S  V  D  D  P  N  C  L  K  E  K  K  S  S  A  S  P  F  K  G  E  F  D  L  N  A  K  P  D  R  D  D  E  L  S  P  G  S  D  S  G  S  M  M  R  M  I  K  R  A  A  E  Q  Y  V  R  H  C  D  N  G  S  S  V  G  N  Q  R  D  G  D  G  A  G  E  T  N  P  G  N  C  V  I  V  S  G  S  H  Q  A  D  V  D  H  N  R  P  L  P  I  S  A  A  A  S  L  A  P  N  D  Q  *  V  A  P  Y  M  R  H  L  N  *  L  C  Y  I  K  N  Q  R  Y  S  A  V  Y  G  N  L  Y  I  L  A  L  L  A  S  C  I  V  H  R  *  T  *  Q  V  A  T  D  V  I  F  L  Q  S  T  G  C  I  L  Q  W  P  R  G  A  L  H  I  Y  Y  I  N  G  W  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100550" stop="100617"/>
                    <exon start="101486" stop="101556"/>
                    <exon start="101684" stop="102717"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1170</number_coding_nucleotides>
                  <number_encoded_amino_acids>390</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVPDNVDLPSRWTCSDNSCDPERSVCSAVQELTADHLRDLLPHINKASKKRKASKQEMDLVETLDGLDALAHLAILEEGETLPASPQATTKHPRHRPGCTCIVCIQPPSGKGPKHKQSCDCNVCKSVKRRFKTLMMKREKKLSEKEAEATCQKLQPQSAGQLLDADDIQEPIDDAVHSSPQHEELNIEGSVDPNYLNEKKSSVEDPNYLDEKKSSVDDTNYLSEKISSVDDPSYLNEKESSVDDPNILNEKKSSVDDPNCLNEKKSAVDDPNYVDERKSSVDDPNCLKEKKSSASPFKGEFDLNAKPDRDDELSPGSDSGSMMRMIKRAAEQYVRHCDNGSSVGNQRDGDGAGETNPGNCVIVSGSHQADVDHNRPLPISAAASLAPNDQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="117567" PGL_stop="116641"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="117567" e_stop="117511"/>
            <exon e_start="117159" e_stop="116749"/>
            <exon e_start="116654" e_stop="116641"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.970" e_score="1.000"/>
          <exon-only e_score="0.929"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="117567" e_stop="117511" e_length="57"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="117510" i_stop="117160" i_length="351"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="117159" e_stop="116749" e_length="411"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.970">
            <gDNA_intron_boundary i_start="116748" i_stop="116655" i_length="94"/>
          </intron>
          <exon e_serial="3" e_score="0.929">
            <gDNA_exon_boundary e_start="116654" e_stop="116641" e_length="14"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117567" stop="117511"/>
              <exon start="117159" stop="116749"/>
              <exon start="116654" stop="116641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294407" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTACAGCCTGCCATGTTCGAAGATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAG : GAAGGACCATTGCCTCATAATGACCGTTTGAGTTATCAACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAACATCAATGGTGGTTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTAATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTATATAAGTTAATGTTAA : GTAAAAAGAAAAAA</gDNA_template>
            <first_frame> L  Q  P  A  M  F  E  D  F  V  K  P  F  Q  I  N  M  E  E  :  E  G  P  L  P  H  N  D  R  L  S  Y  Q  P  L  D  I  Y  P  A  P  L  H  R  S  *  H  Q  W  W  L  F  E  F  S  G  Q  T  D  I  G  S  C  L  V  V  N  V  E  V  *  R  Q  C  P  F  S  H  Q  L  *  P  K  P  L  Q  T  N  R  K  A  A  *  *  I  V  R  L  G  C  K  C  S  I  F  Y  Y  L  G  T  F  L  F  L  L  S  F  F  C  S  L  F  F  S  L  N  L  F  H  G  L  N  R  A  T  L  Y  K  K  D  Q  *  E  S  K  M  *  N  L  A  I  Y  I  S  *  C  *  :  V  K  R  K   </first_frame>
            <second_frame>  Y  S  L  P  C  S  K  I  L  *  S  L  S  K  *  T  W  R  R :   K  D  H  C  L  I  M  T  V  *  V  I  N  R  W  T  F  I  L  R  P  S  T  E  V  N  I  N  G  G  C  L  S  F  L  V  R  P  T  S  E  V  A  *  *  *  M  L  R  F  R  D  N  V  L  F  H  I  N  S  D  Q  N  L  C  K  P  T  E  R  L  L  S  R  *  *  G  W  V  A  N  V  P  F  F  I  I  *  A  H  F  C  F  F  F  P  S  F  A  L  F  S  F  P  L  I  Y  F  M  V  *  I  E  Q  L  C  T  R  K  T  N  E  N  R  K  C  K  I  W  L  F  I  *  V  N  V  K :   *  K  E  K  </second_frame>
            <third_frame>   T  A  C  H  V  R  R  F  C  E  A  F  P  N  K  H  G  G   : G  R  T  I  A  S  *  *  P  F  E  L  S  T  A  G  H  L  S  C  A  P  P  Q  K  L  T  S  M  V  V  V  *  V  F  W  S  D  R  H  R  K  L  P  S  S  E  C  *  G  L  E  T  M  S  F  F  T  S  T  L  T  K  T  F  A  N  Q  Q  K  G  C  L  V  D  S  K  V  G  L  Q  M  F  H  F  L  L  F  R  H  I  F  V  S  S  F  L  L  L  L  S  F  L  F  P  *  F  I  S  W  F  K  *  S  N  F  V  Q  E  R  P  M  R  I  E  N  V  K  F  G  Y  L  Y  K  L  M  L   : S  K  K  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0329G05.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="117133" e_stop="116739"/>
            <exon e_start="116654" e_stop="116643"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.970" e_score="0.992"/>
          <exon-only e_score="0.750"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="117133" e_stop="116739" e_length="395"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.970">
            <gDNA_intron_boundary i_start="116738" i_stop="116655" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="0.750">
            <gDNA_exon_boundary e_start="116654" e_stop="116643" e_length="12"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117133" stop="116739"/>
              <exon start="116654" stop="116643"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341394" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGAGTTATCAACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAACATCAATGGTGGTTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTAATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTATATAAGTTAATGTTAAGTATATATTC : GTAAAAAGAAAA</gDNA_template>
            <first_frame> F  E  L  S  T  A  G  H  L  S  C  A  P  P  Q  K  L  T  S  M  V  V  V  *  V  F  W  S  D  R  H  R  K  L  P  S  S  E  C  *  G  L  E  T  M  S  F  F  T  S  T  L  T  K  T  F  A  N  Q  Q  K  G  C  L  V  D  S  K  V  G  L  Q  M  F  H  F  L  L  F  R  H  I  F  V  S  S  F  L  L  L  L  S  F  L  F  P  *  F  I  S  W  F  K  *  S  N  F  V  Q  E  R  P  M  R  I  E  N  V  K  F  G  Y  L  Y  K  L  M  L  S  I  Y  S :   *  K  E   </first_frame>
            <second_frame>  L  S  Y  Q  P  L  D  I  Y  P  A  P  L  H  R  S  *  H  Q  W  W  L  F  E  F  S  G  Q  T  D  I  G  S  C  L  V  V  N  V  E  V  *  R  Q  C  P  F  S  H  Q  L  *  P  K  P  L  Q  T  N  R  K  A  A  *  *  I  V  R  L  G  C  K  C  S  I  F  Y  Y  L  G  T  F  L  F  L  L  S  F  F  C  S  L  F  F  S  L  N  L  F  H  G  L  N  R  A  T  L  Y  K  K  D  Q  *  E  S  K  M  *  N  L  A  I  Y  I  S  *  C  *  V  Y  I   : R  K  K  K  </second_frame>
            <third_frame>   *  V  I  N  R  W  T  F  I  L  R  P  S  T  E  V  N  I  N  G  G  C  L  S  F  L  V  R  P  T  S  E  V  A  *  *  *  M  L  R  F  R  D  N  V  L  F  H  I  N  S  D  Q  N  L  C  K  P  T  E  R  L  L  S  R  *  *  G  W  V  A  N  V  P  F  F  I  I  *  A  H  F  C  F  F  F  P  S  F  A  L  F  S  F  P  L  I  Y  F  M  V  *  I  E  Q  L  C  T  R  K  T  N  E  N  R  K  C  K  I  W  L  F  I  *  V  N  V  K  Y  I  F  :  V  K  R  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02HBa0329G05.3"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="128277" PGL_stop="123525"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="128277" e_stop="128237"/>
            <exon e_start="127020" e_stop="126908"/>
            <exon e_start="126245" e_stop="126029"/>
            <exon e_start="124674" e_stop="124603"/>
            <exon e_start="123589" e_stop="123525"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.880" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.946" e_score="0.991"/>
          <exon-intron don_prob="0.984" acc_prob="0.164" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="128277" e_stop="128237" e_length="41"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.993">
            <gDNA_intron_boundary i_start="128236" i_stop="127021" i_length="1216"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="127020" e_stop="126908" e_length="113"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.880">
            <gDNA_intron_boundary i_start="126907" i_stop="126246" i_length="662"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="126245" e_stop="126029" e_length="217"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.946">
            <gDNA_intron_boundary i_start="126028" i_stop="124675" i_length="1354"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="124674" e_stop="124603" e_length="72"/>
          </exon>
          <intron i_serial="4" don_prob="0.984" acc_prob="0.164">
            <gDNA_intron_boundary i_start="124602" i_stop="123590" i_length="1013"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="123589" e_stop="123525" e_length="65"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128277" stop="128237"/>
              <exon start="127020" stop="126908"/>
              <exon start="126245" stop="126065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="126977" stop="126908"/>
              <exon start="126245" stop="126029"/>
              <exon start="124674" stop="124603"/>
              <exon start="123589" stop="123525"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365904" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTGCACGAATCAATGAAATGTTTTCTGTTGCTAGGAGAAAT : GCTCCAGCTTTTGTATTTATAGATGAGATTGATGCTATTGCTGGAAGGCATGCAAGAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTGATTTCTCAGCTTGACGGGGA : GAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGTCATATTCATTTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGTCCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGAGTTCACAGTGCTGGGAAACAGCTTTCCGAGGATATTGCCTTTGAGAAA : CTTGTCTTTCGTACAGTTGGATATTCTGGGGCAGACATAAGAAATCTAGTCAATGAAGCTGGAATAATGTCT : GTAAGAAAAGGACATTCTAAGATCAACCAGCAGGATATCGTCGATGTTTTGGACAAGCAATTGCT</gDNA_template>
            <first_frame> L  H  E  S  M  K  C  F  L  L  L  G  E  M :   L  Q  L  L  Y  L  *  M  R  L  M  L  L  L  E  G  M  Q  E  R  I  H  A  G  R  Q  H  L  R  L  *  F  L  S  L  T  G   : R  K  K  K  L  V  L  I  G  F  H  *  D  K  L  S  Y  S  F  V  Q  P  I  G  Q  M  N  W  T  *  N  L  S  A  L  D  V  L  T  D  V  C  I  L  V  Y  Q  M  Q  S  N  E  C  K  F  L  E  F  T  V  L  G  N  S  F  P  R  I  L  P  L  R  N :   L  S  F  V  Q  L  D  I  L  G  Q  T  *  E  I  *  S  M  K  L  E  *  C  L :   *  E  K  D  I  L  R  S  T  S  R  I  S  S  M  F  W  T  S  N  C  </first_frame>
            <second_frame>  C  T  N  Q  *  N  V  F  C  C  *  E  K   : C  S  S  F  C  I  Y  R  *  D  *  C  Y  C  W  K  A  C  K  K  G  S  T  Q  E  G  N  I  *  G  S  D  F  S  A  *  R  G  :  E  R  K  N  W  C  *  *  V  F  T  K  T  S  C  H  I  H  L  C  N  Q  S  A  R  *  T  G  L  R  I  C  P  P  W  T  Y  *  Q  T  C  V  Y  W  F  T  R  C  K  A  T  S  A  N  F  W  S  S  Q  C  W  E  T  A  F  R  G  Y  C  L  *  E   : T  C  L  S  Y  S  W  I  F  W  G  R  H  K  K  S  S  Q  *  S  W  N  N  V   : C  K  K  R  T  F  *  D  Q  P  A  G  Y  R  R  C  F  G  Q  A  I  A </second_frame>
            <third_frame>   A  R  I  N  E  M  F  S  V  A  R  R  N  :  A  P  A  F  V  F  I  D  E  I  D  A  I  A  G  R  H  A  R  K  D  P  R  R  K  A  T  F  E  A  L  I  S  Q  L  D  G  E :   K  E  K  T  G  V  D  R  F  S  L  R  Q  A  V  I  F  I  C  A  T  N  R  P  D  E  L  D  L  E  F  V  R  P  G  R  I  D  R  R  V  Y  I  G  L  P  D  A  K  Q  R  V  Q  I  F  G  V  H  S  A  G  K  Q  L  S  E  D  I  A  F  E  K  :  L  V  F  R  T  V  G  Y  S  G  A  D  I  R  N  L  V  N  E  A  G  I  M  S  :  V  R  K  G  H  S  K  I  N  Q  Q  D  I  V  D  V  L  D  K  Q  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="128275" stop="128237"/>
                    <exon start="127020" stop="126908"/>
                    <exon start="126245" stop="126029"/>
                    <exon start="124674" stop="124603"/>
                    <exon start="123589" stop="123527"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>504</number_coding_nucleotides>
                  <number_encoded_amino_acids>168</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ARINEMFSVARRNAPAFVFIDEIDAIAGRHARKDPRRKATFEALISQLDGEKEKTGVDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRVYIGLPDAKQRVQIFGVHSAGKQLSEDIAFEKLVFRTVGYSGADIRNLVNEAGIMSVRKGHSKINQQDIVDVLDKQL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="129706" PGL_stop="128855"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="129706" e_stop="129508"/>
            <exon e_start="129133" e_stop="129056"/>
            <exon e_start="128965" e_stop="128855"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.982" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="129706" e_stop="129508" e_length="199"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.995">
            <gDNA_intron_boundary i_start="129507" i_stop="129134" i_length="374"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="129133" e_stop="129056" e_length="78"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.982">
            <gDNA_intron_boundary i_start="129055" i_stop="128966" i_length="90"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="128965" e_stop="128855" e_length="111"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129706" stop="129508"/>
              <exon start="129133" stop="129056"/>
              <exon start="128965" stop="128855"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315442" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAACAATTAGATTCAGTAAATGCGAGGTATGTGGTTGAATTTGACATGAAGGAAGTTGAGAACAGCCTTCGCAAAGATGTTGTTGAGAAGACAAGAGAAACTCAAGGAACCAGGGCATTGTGGATCTCGAAAAGATGGTGGAGATATCGCCCGAAACTTCCCTATACCTATTTTCTTCAAAAACTTGATACTTCTGAG : GTGGCTGCTATAGTCTTCACAGAGGATCTGAAGAGAGTGTTTGTCACAATGAAAGAAGGATTCCCTCTTGAATATATT : GTTGATATTCCACTAGATCCTTTCTTATTTGAGATGATATCAAGTTCTGGAGCTGAAGTAGATCTACTTCAGAAGCGGCAGATTCATTACTTTTTCAAAGTTCTTTTTGCT</gDNA_template>
            <first_frame> R  T  I  R  F  S  K  C  E  V  C  G  *  I  *  H  E  G  S  *  E  Q  P  S  Q  R  C  C  *  E  D  K  R  N  S  R  N  Q  G  I  V  D  L  E  K  M  V  E  I  S  P  E  T  S  L  Y  L  F  S  S  K  T  *  Y  F  *   : G  G  C  Y  S  L  H  R  G  S  E  E  S  V  C  H  N  E  R  R  I  P  S  *  I  Y   : C  *  Y  S  T  R  S  F  L  I  *  D  D  I  K  F  W  S  *  S  R  S  T  S  E  A  A  D  S  L  L  F  Q  S  S  F  C  </first_frame>
            <second_frame>  E  Q  L  D  S  V  N  A  R  Y  V  V  E  F  D  M  K  E  V  E  N  S  L  R  K  D  V  V  E  K  T  R  E  T  Q  G  T  R  A  L  W  I  S  K  R  W  W  R  Y  R  P  K  L  P  Y  T  Y  F  L  Q  K  L  D  T  S  E  :  V  A  A  I  V  F  T  E  D  L  K  R  V  F  V  T  M  K  E  G  F  P  L  E  Y  I  :  V  D  I  P  L  D  P  F  L  F  E  M  I  S  S  S  G  A  E  V  D  L  L  Q  K  R  Q  I  H  Y  F  F  K  V  L  F  A </second_frame>
            <third_frame>   N  N  *  I  Q  *  M  R  G  M  W  L  N  L  T  *  R  K  L  R  T  A  F  A  K  M  L  L  R  R  Q  E  K  L  K  E  P  G  H  C  G  S  R  K  D  G  G  D  I  A  R  N  F  P  I  P  I  F  F  K  N  L  I  L  L  R :   W  L  L  *  S  S  Q  R  I  *  R  E  C  L  S  Q  *  K  K  D  S  L  L  N  I  L :   L  I  F  H  *  I  L  S  Y  L  R  *  Y  Q  V  L  E  L  K  *  I  Y  F  R  S  G  R  F  I  T  F  S  K  F  F  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129705" stop="129508"/>
                    <exon start="129133" stop="129056"/>
                    <exon start="128965" stop="128855"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>387</number_coding_nucleotides>
                  <number_encoded_amino_acids>129</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EQLDSVNARYVVEFDMKEVENSLRKDVVEKTRETQGTRALWISKRWWRYRPKLPYTYFLQKLDTSEVAAIVFTEDLKRVFVTMKEGFPLEYIVDIPLDPFLFEMISSSGAEVDLLQKRQIHYFFKVLFA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="132480" PGL_stop="131715"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="132480" e_stop="131715"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="132480" e_stop="131715" e_length="766"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132480" stop="131715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317983" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132480" stop="131819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317746" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGACCGGCGACAATTCAGTTTTTCCGACGAGCAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAGGTGAATTTTCCCATTTCTTATTTGAGTTATTTGTATAACTTTGTGCTCACATTATCCTTTTTCCCCTTCCCCCAGGACGTCAAGAAATGGGATTCCAAAAGAGTTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTCAAAAAATATATATGGCAATTCGAGCTCCTATTATTAATAGGGAAAGAAAAGAACTTACTGAGGCATACATGGAAGCATTGATTCCTGAACCTACTCCTGTTAATGTCAAAAGGTAAAACACAAATCAAACTGCTAA</gDNA_template>
            <first_frame> R  P  A  T  I  Q  F  F  R  R  A  R  E  P  K  P  K  H  Y  L  R  I  L  *  A  S  Q  C  I  *  P  L  L  L  L  L  N  S  *  I  Q  Y  N  Y  L  Q  N  P  F  Y  S  H  C  H  S  N  A  E  G  S  F  P  V  *  E  D  L  P  L  *  L  L  L  P  I  L  I  T  V  L  K  G  F  L  G  C  N  F  H  S  P  F  A  V  V  P  N  V  S  *  I  N  W  K  T  L  *  S  K  R  R  V  L  I  L  R  M  L  K  L  K  L  G  N  F  Q  V  E  L  L  I  Q  P  R  M  A  K  F  C  C  N  V  F  S  L  S  C  F  L  S  S  *  I  G  T  N  S  S  P  G  R  *  I  F  P  F  L  I  *  V  I  C  I  T  L  C  S  H  Y  P  F  S  P  S  P  R  T  S  R  N  G  I  P  K  E  L  V  Y  S  F  S  I  L  *  L  R  Y  V  L  V  K  K  Y  I  W  Q  F  E  L  L  L  L  I  G  K  E  K  N  L  L  R  H  T  W  K  H  *  F  L  N  L  L  L  L  M  S  K  G  K  T  Q  I  K  L  L  </first_frame>
            <second_frame>  D  R  R  Q  F  S  F  S  D  E  Q  E  S  R  N  R  S  I  I  F  V  F  S  K  L  L  N  A  S  N  H  Y  S  S  S  S  T  A  E  F  N  T  I  I  F  K  T  P  F  T  H  I  A  I  Q  M  Q  K  E  V  F  P  Y  K  K  T  Y  H  C  S  F  F  F  Q  Y  *  *  Q  S  *  R  V  F  L  A  A  T  F  T  V  H  S  P  W  F  R  T  F  L  E  S  I  G  R  L  C  E  A  R  D  G  F  *  F  *  G  C  *  S  *  S  W  G  I  F  R  S  S  C  *  F  S  Q  E  W  P  S  F  A  A  T  F  S  V  *  V  V  S  *  V  L  E  L  E  Q  I  R  V  L  E  G  E  F  S  H  F  L  F  E  L  F  V  *  L  C  A  H  I  I  L  F  P  L  P  P  G  R  Q  E  M  G  F  Q  K  S  W  C  I  H  S  L  Y  Y  S  Y  G  M  F  L  S  K  N  I  Y  G  N  S  S  S  Y  Y  *  *  G  K  K  R  T  Y  *  G  I  H  G  S  I  D  S  *  T  Y  S  C  *  C  Q  K  V  K  H  K  S  N  C  * </second_frame>
            <third_frame>   T  G  D  N  S  V  F  P  T  S  K  R  A  E  T  E  A  L  S  S  Y  S  L  S  F  S  M  H  L  T  T  T  P  P  P  Q  Q  L  N  S  I  Q  L  S  S  K  P  L  L  L  T  L  P  F  K  C  R  R  K  F  S  R  I  R  R  P  T  I  V  A  S  S  S  N  T  N  N  S  P  E  G  F  S  W  L  Q  L  S  Q  S  I  R  R  G  S  E  R  F  L  N  Q  L  E  D  S  V  K  Q  E  T  G  F  D  F  K  D  V  K  V  K  V  G  E  F  S  G  R  A  V  D  S  A  K  N  G  Q  V  L  L  Q  R  F  Q  S  E  L  F  P  E  F  L  N  W  N  K  F  E  S  W  K  V  N  F  P  I  S  Y  L  S  Y  L  Y  N  F  V  L  T  L  S  F  F  P  F  P  Q  D  V  K  K  W  D  S  K  R  V  G  V  F  I  L  Y  I  I  V  T  V  C  S  C  Q  K  I  Y  M  A  I  R  A  P  I  I  N  R  E  R  K  E  L  T  E  A  Y  M  E  A  L  I  P  E  P  T  P  V  N  V  K  R  *  N  T  N  Q  T  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="132478" stop="131735"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>741</number_coding_nucleotides>
                  <number_encoded_amino_acids>247</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TGDNSVFPTSKRAETEALSSYSLSFSMHLTTTPPPQQLNSIQLSSKPLLLTLPFKCRRKFSRIRRPTIVASSSNTNNSPEGFSWLQLSQSIRRGSERFLNQLEDSVKQETGFDFKDVKVKVGEFSGRAVDSAKNGQVLLQRFQSELFPEFLNWNKFESWKVNFPISYLSYLYNFVLTLSFFPFPQDVKKWDSKRVGVFILYIIVTVCSCQKIYMAIRAPIINRERKELTEAYMEALIPEPTPVNVKR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="138202" PGL_stop="134036"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="134742" e_stop="134674"/>
            <exon e_start="134541" e_stop="134036"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.923" acc_prob="0.961" e_score="0.971"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.971">
            <gDNA_exon_boundary e_start="134742" e_stop="134674" e_length="69"/>
          </exon>
          <intron i_serial="1" don_prob="0.923" acc_prob="0.961">
            <gDNA_intron_boundary i_start="134673" i_stop="134542" i_length="132"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="134541" e_stop="134036" e_length="506"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="134742" stop="134674"/>
              <exon start="134541" stop="134257"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="134514" stop="134036"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253670" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTATCTCTTTGGACAAGCCTATAGTTGCCTCTTGTGGCACAGGTGTAACTGCTTGCGTACTTGTCTTG : GGCCTCCATCGACTGGGGAAGACTGACATTCCAGTCTATGATGGTTCATGGACAGAATGGGCAACACAGCCAGATACACCTCTCTGCACATCTGAAAGATGAAGACGTTTGTATGGCCTGCCTAGTTTTTATGGGTGAGCAATGATGATTGTGAATCTAGATCTGGTTCCTTTTCTTAATGGTTAGTGCAACAACTTACATTGTATTGTTGAATGATAACAACGGAAAAATTTCTTCTCTGTTGTACAAAATGCCTTAATTTTACCTTCATTATATTTTTGGTTAGTGCAACAACTTCCATTAACTATACTTTGTACTAAAAAACACTCTTATGCTTGGATAAGTGAACTTAGAAAGGCCCCTGAAATCAAATGTATTCATGCGTTGTCCAGTTGGAGTTTATATTTGATGTGTCATTGAACATAAAACTACGCTATGCGTGATTATAAATATTTAGCGAAATAGATATTTGTATTTATACATATAATCATTTTTGGAACTTATAA</gDNA_template>
            <first_frame> G  I  S  L  D  K  P  I  V  A  S  C  G  T  G  V  T  A  C  V  L  V  L  :  G  L  H  R  L  G  K  T  D  I  P  V  Y  D  G  S  W  T  E  W  A  T  Q  P  D  T  P  L  C  T  S  E  R  *  R  R  L  Y  G  L  P  S  F  Y  G  *  A  M  M  I  V  N  L  D  L  V  P  F  L  N  G  *  C  N  N  L  H  C  I  V  E  *  *  Q  R  K  N  F  F  S  V  V  Q  N  A  L  I  L  P  S  L  Y  F  W  L  V  Q  Q  L  P  L  T  I  L  C  T  K  K  H  S  Y  A  W  I  S  E  L  R  K  A  P  E  I  K  C  I  H  A  L  S  S  W  S  L  Y  L  M  C  H  *  T  *  N  Y  A  M  R  D  Y  K  Y  L  A  K  *  I  F  V  F  I  H  I  I  I  F  G  T  Y   </first_frame>
            <second_frame>  V  S  L  W  T  S  L  *  L  P  L  V  A  Q  V  *  L  L  A  Y  L  S  W :   A  S  I  D  W  G  R  L  T  F  Q  S  M  M  V  H  G  Q  N  G  Q  H  S  Q  I  H  L  S  A  H  L  K  D  E  D  V  C  M  A  C  L  V  F  M  G  E  Q  *  *  L  *  I  *  I  W  F  L  F  L  M  V  S  A  T  T  Y  I  V  L  L  N  D  N  N  G  K  I  S  S  L  L  Y  K  M  P  *  F  Y  L  H  Y  I  F  G  *  C  N  N  F  H  *  L  Y  F  V  L  K  N  T  L  M  L  G  *  V  N  L  E  R  P  L  K  S  N  V  F  M  R  C  P  V  G  V  Y  I  *  C  V  I  E  H  K  T  T  L  C  V  I  I  N  I  *  R  N  R  Y  L  Y  L  Y  I  *  S  F  L  E  L  I  </second_frame>
            <third_frame>   Y  L  F  G  Q  A  Y  S  C  L  L  W  H  R  C  N  C  L  R  T  C  L   : G  P  P  S  T  G  E  D  *  H  S  S  L  *  W  F  M  D  R  M  G  N  T  A  R  Y  T  S  L  H  I  *  K  M  K  T  F  V  W  P  A  *  F  L  W  V  S  N  D  D  C  E  S  R  S  G  S  F  S  *  W  L  V  Q  Q  L  T  L  Y  C  *  M  I  T  T  E  K  F  L  L  C  C  T  K  C  L  N  F  T  F  I  I  F  L  V  S  A  T  T  S  I  N  Y  T  L  Y  *  K  T  L  L  C  L  D  K  *  T  *  K  G  P  *  N  Q  M  Y  S  C  V  V  Q  L  E  F  I  F  D  V  S  L  N  I  K  L  R  Y  A  *  L  *  I  F  S  E  I  D  I  C  I  Y  T  Y  N  H  F  W  N  L  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="134322" stop="134122"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QRKNFFSVVQNALILPSLYFWLVQQLPLTILCTKKHSYAWISELRKAPEIKCIHALSSWSLYLMCH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="138202" e_stop="138126"/>
            <exon e_start="135310" e_stop="135247"/>
            <exon e_start="134741" e_stop="134674"/>
            <exon e_start="134541" e_stop="134036"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.940" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.961" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="138202" e_stop="138126" e_length="77"/>
          </exon>
          <intron i_serial="1" don_prob="0.940" acc_prob="0.999">
            <gDNA_intron_boundary i_start="138125" i_stop="135311" i_length="2815"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="135310" e_stop="135247" e_length="64"/>
          </exon>
          <intron i_serial="2" don_prob="0.978" acc_prob="0.945">
            <gDNA_intron_boundary i_start="135246" i_stop="134742" i_length="505"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="134741" e_stop="134674" e_length="68"/>
          </exon>
          <intron i_serial="3" don_prob="0.923" acc_prob="0.961">
            <gDNA_intron_boundary i_start="134673" i_stop="134542" i_length="132"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="134541" e_stop="134036" e_length="506"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="138202" stop="138126"/>
              <exon start="135310" stop="135247"/>
              <exon start="134741" stop="134674"/>
              <exon start="134541" stop="134270"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="134514" stop="134036"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253670" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATGGTGTTGCACCAGAGCCTCGAAAAGGAATTAACAGTGGACATGTACCCGGGAGCAAGTGTATTCCTTTTCCACAG : ATGTTGGATGGCTCACAGACACTCTTATCCCGTGAAGAGCTCGAGAAAAAATTTGGTCAAGAAG : GTATCTCTTTGGACAAGCCTATAGTTGCCTCTTGTGGCACAGGTGTAACTGCTTGCGTACTTGTCTTG : GGCCTCCATCGACTGGGGAAGACTGACATTCCAGTCTATGATGGTTCATGGACAGAATGGGCAACACAGCCAGATACACCTCTCTGCACATCTGAAAGATGAAGACGTTTGTATGGCCTGCCTAGTTTTTATGGGTGAGCAATGATGATTGTGAATCTAGATCTGGTTCCTTTTCTTAATGGTTAGTGCAACAACTTACATTGTATTGTTGAATGATAACAACGGAAAAATTTCTTCTCTGTTGTACAAAATGCCTTAATTTTACCTTCATTATATTTTTGGTTAGTGCAACAACTTCCATTAACTATACTTTGTACTAAAAAACACTCTTATGCTTGGATAAGTGAACTTAGAAAGGCCCCTGAAATCAAATGTATTCATGCGTTGTCCAGTTGGAGTTTATATTTGATGTGTCATTGAACATAAAACTACGCTATGCGTGATTATAAATATTTAGCGAAATAGATATTTGTATTTATACATATAATCATTTTTGGAACTTATAA</gDNA_template>
            <first_frame> M  V  L  H  Q  S  L  E  K  E  L  T  V  D  M  Y  P  G  A  S  V  F  L  F  H  R :   C  W  M  A  H  R  H  S  Y  P  V  K  S  S  R  K  N  L  V  K  K  :  V  S  L  W  T  S  L  *  L  P  L  V  A  Q  V  *  L  L  A  Y  L  S  W :   A  S  I  D  W  G  R  L  T  F  Q  S  M  M  V  H  G  Q  N  G  Q  H  S  Q  I  H  L  S  A  H  L  K  D  E  D  V  C  M  A  C  L  V  F  M  G  E  Q  *  *  L  *  I  *  I  W  F  L  F  L  M  V  S  A  T  T  Y  I  V  L  L  N  D  N  N  G  K  I  S  S  L  L  Y  K  M  P  *  F  Y  L  H  Y  I  F  G  *  C  N  N  F  H  *  L  Y  F  V  L  K  N  T  L  M  L  G  *  V  N  L  E  R  P  L  K  S  N  V  F  M  R  C  P  V  G  V  Y  I  *  C  V  I  E  H  K  T  T  L  C  V  I  I  N  I  *  R  N  R  Y  L  Y  L  Y  I  *  S  F  L  E  L  I  </first_frame>
            <second_frame>  W  C  C  T  R  A  S  K  R  N  *  Q  W  T  C  T  R  E  Q  V  Y  S  F  S  T   : D  V  G  W  L  T  D  T  L  I  P  *  R  A  R  E  K  I  W  S  R  R :   Y  L  F  G  Q  A  Y  S  C  L  L  W  H  R  C  N  C  L  R  T  C  L   : G  P  P  S  T  G  E  D  *  H  S  S  L  *  W  F  M  D  R  M  G  N  T  A  R  Y  T  S  L  H  I  *  K  M  K  T  F  V  W  P  A  *  F  L  W  V  S  N  D  D  C  E  S  R  S  G  S  F  S  *  W  L  V  Q  Q  L  T  L  Y  C  *  M  I  T  T  E  K  F  L  L  C  C  T  K  C  L  N  F  T  F  I  I  F  L  V  S  A  T  T  S  I  N  Y  T  L  Y  *  K  T  L  L  C  L  D  K  *  T  *  K  G  P  *  N  Q  M  Y  S  C  V  V  Q  L  E  F  I  F  D  V  S  L  N  I  K  L  R  Y  A  *  L  *  I  F  S  E  I  D  I  C  I  Y  T  Y  N  H  F  W  N  L  * </second_frame>
            <third_frame>   G  V  A  P  E  P  R  K  G  I  N  S  G  H  V  P  G  S  K  C  I  P  F  P  Q  :  M  L  D  G  S  Q  T  L  L  S  R  E  E  L  E  K  K  F  G  Q  E   : G  I  S  L  D  K  P  I  V  A  S  C  G  T  G  V  T  A  C  V  L  V  L  :  G  L  H  R  L  G  K  T  D  I  P  V  Y  D  G  S  W  T  E  W  A  T  Q  P  D  T  P  L  C  T  S  E  R  *  R  R  L  Y  G  L  P  S  F  Y  G  *  A  M  M  I  V  N  L  D  L  V  P  F  L  N  G  *  C  N  N  L  H  C  I  V  E  *  *  Q  R  K  N  F  F  S  V  V  Q  N  A  L  I  L  P  S  L  Y  F  W  L  V  Q  Q  L  P  L  T  I  L  C  T  K  K  H  S  Y  A  W  I  S  E  L  R  K  A  P  E  I  K  C  I  H  A  L  S  S  W  S  L  Y  L  M  C  H  *  T  *  N  Y  A  M  R  D  Y  K  Y  L  A  K  *  I  F  V  F  I  H  I  I  I  F  G  T  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="138200" stop="138126"/>
                    <exon start="135310" stop="135247"/>
                    <exon start="134741" stop="134674"/>
                    <exon start="134541" stop="134440"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>306</number_coding_nucleotides>
                  <number_encoded_amino_acids>102</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GVAPEPRKGINSGHVPGSKCIPFPQMLDGSQTLLSREELEKKFGQEGISLDKPIVASCGTGVTACVLVLGLHRLGKTDIPVYDGSWTEWATQPDTPLCTSER*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02HBa0329G05.3" strand="-"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="134322" stop="134122"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QRKNFFSVVQNALILPSLYFWLVQQLPLTILCTKKHSYAWISELRKAPEIKCIHALSSWSLYLMCH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 155 chains have been computed
$ 
$ memory statistics:
$ 257400 bytes spliced alignments in total
$ 119 spliced alignments have been stored
$ 2163 bytes was the average size of a spliced alignment
$ 25040 bytes predicted gene locations in total
$ 14 predicted gene locations have been stored
$ 1788 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 177 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-28 19:42:05
-->
