<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:35:46"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569469" ref_strand="+" ref_description="SGN-U569469 Tomato 200607#2 [16 ESTs aligned] (*GB) gi|157331587|emb|CAO66005.1| (e_value=3e-49) unnamed; (*ATH) AT2G20740.1 (e_value=2e-46) | Symbol: None | expressed protein | chr2:8942688-8944591 FORWARD | Aliases: F5H14.29, F5H14_29, AT2G20730; ">
      <seq>tcttggaaatttcttctgagcctatctggggaaatttttgcatatctaggcatgtcaccatcactattatttcttttaaaaaaatcaacaatctaaacagttataaatcacatcaatattctttctaatgaactcttccaagcacccttaaaaacataacaacaatttacctagcaagtgctcttctatttcccctcctaagtgaatgaaacagctcctgtttaaaattcaagatggtaaaacttgtaaagagttacctgcgattatccctcaagatcacaaacataacaataggatttatgggcattgcaatgctcatctatggtgtatggatgatcagagtttggcagcgcgatgctgccaactcaccctcatcccctgattatgctcaatttccttggtttatccatgcatttcttggtgttggcactgctttgtgtgcaatcactttccttggtcatgttgcagcaagcactgccaattcctattgcctctcattttatatgttcttcatatttgtgcttcttttagcagagattgcaattacagctgatgttttcttgaactctgattgggagaaggatttgcctgaagatccatcaggaaggtttgatgatttcaaggattttgtggactcgaatagcgatgtctgccaatggattaccctgctttgtgttctaacacagggatgttgtatcttattggctacaattctaagaactcttgggcaagttaaggaaaatagtcatgagtatgaaggtgaatatgcagaaccatcagctccacttcttcgccctccgcaactgcctccaaatcctctgtatccatatgttattggtgaaccagttcatattgaaccacattctgcctacaagaatgtttgagttttggaagacaattggtttgatccctttgtaaaactatgaaatcttgaaacctctctttttggcttattatgttattgaagtttgcagaagttgaagtgaatgaagttatcctttatggaaaaatatgctatgtagcttttccaattgcttaagaatgagctttgttaatcagaaacagatgagaccattttatgtataattaagattgtgagttttgcaacttttatgtttttgagtggtatcatttttgtttattacaatgaacaatgatattacattgtttatgcatgttgaacttttttggactttttcatatattaaactctcctaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="-" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="5305" stop="2842"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5005" g_stop="4606" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4605" i_stop="4514" i_length="92">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4513" g_stop="4414" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="500" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4413" i_stop="4298" i_length="116">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4297" g_stop="4217" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="581" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="4216" i_stop="3872" i_length="345">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3871" g_stop="3767" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="582" r_stop="686" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="3766" i_stop="3676" i_length="91">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.354" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="3675" g_stop="3142" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="687" r_stop="1220" r_length="534" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="-" ref_id="SGN-U569469" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1220</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U569469" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5005" e_stop="4606"/>
          <exon e_start="4513" e_stop="4414"/>
          <exon e_start="4297" e_stop="4217"/>
          <exon e_start="3871" e_stop="3767"/>
          <exon e_start="3675" e_stop="3142"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTGGAAATTTCTTCTGAGCCTATCTGGGGAAATTTTTGCATATCTAGGCATGTCACCATCACTATTATTTCTTTTAAAAAAATCAACAATCTAAACAGTTATAAATCACATCAATATGCTTTCTAATGAACTCTTCCAAGCACCCTTAAAAACATAACAACAATTTACCTAGCAAGTGCTCTTCTATTTCCCCTCCTAAGTGAATGAAACAGCTCCTGTTTAAAATTCAAGATGGTAAAACTTGTAAAGAGTTACCTGCGATTATCCCTCAAGATCACAAACATAACAATAGGATTTATGGGCATTGCAATGCTCATCTATGGTGTATGGATGATCAGAGTTTGGCAGCGCGATGCTGCCAACTCACCCTCATCCCCTGATTATGCTCAATTTCCTTGGTGAGTTCGGTTATCTAACTTTCTTTTTTATTTTACAAATACAGTATAATTTTCCAACGAAGCTAACACTCACAGTGGCGAAACAATGACAGGTTTATCCATGCATTTCTTGGTGTTGGCACTGCTTTGTGTGCAATCACTTTCCTTGGTCATGTTGCAGCAAGCACTGCCAATTCCTATTGCCTCTCATTTGTATCCTTTTTTCTTTATATTTCTCATATATAAAATAGTCTTTGAGTAAATTTATTTTTGGTCCTAAATGAAACTGCATTGAGAGAAACAAAAATGGACCTTAACTATACTTATAGTATATGTTCTTCATATTTGTGCTTCTTTTAGCAGAGATTGCAATTACAGCTGATGTTTTCTTGAACTCTGATTGGGAGAAGGTATGCATCTTACATCTAAGTTATCTTTTATCATATTGTTATATTCAAAGTTATCTCTCTGTATTCTATTGATCAAGACATCAACAAAACAACCTTGTGTTGTAAAAATGGGAAAAATATAATTGAAGAAGAAATGACTTTGAGGCGCGAAAGAATAGACTTTTCTTAAAGAGATATTGCTTCATGTTCTTTCACGAACAGATGTTTTTGTTCAATTTAAAACCTCTAATATGTTACAGACTATATAACAATACCACCAACACATGTACCGGATAACTCTCTGTCCTGCCAAAGCTTGGACAATTGCTTCTCTCCAATGTTCTCACTGTGTTTTACCTGAATCAGGATTTGCCTGAAGATCCATCAGGAAGGTTTGATGATTTCAAGGATTTTGTGGACTCGAATAGCGATGTCTGCCAATGGATTACCCTGCTTTGTGTTCTAACACAGGTAAGAAATAAAAGCAACCCCACCTCCAAGAACTTCACTATGTTTTACTTGGCTCAAATTAGTTACATGATTCTTAATGCATAATAAGCAGGGATGTTGTATCTTATTGGCTACAATTCTAAGAACTCTTGGGCAAGTTAAGGAAAATAGTCATGAGTATGAAGGTGAATATGCAGAACCATCAGCTCCACTTCTTCGCCCTCCGCAACTGCCTCCAAATCCTCTGTATCCATATGTTATTGGTGAACCAGTTCATATTGAACCACATTCTGCCTACAAGAATGTTTGAGTTTTGGAAGACAATTGGTTTGATCCCTTTGTAAAACTATGAAATCTTGAAACCTCTCTTTTTGGCTTATTATGTTATTGAAGTCTGCAGAAGTTGAAGTGAATGAAGTTATCCTTTATGGAAAAATATGCTATGTAGCTTCTCCAATTGCTTAAGAATGAGCTTTGTTAATCAGAAACAGATGAGACCATTTTATGTATAATTAAGATTGTGAGTTTTGCAACTTTTATGTTTTTGAGTGGTATCATTTTTGTTTATTACAATGAACAATGATATTACATTGTTTATGCATGTTGAACTTCTTTGGACTTCTTCATATATTAAACTCTCCTAATG</genome_strand>
        <mrna_strand>TCTTGGAAATTTCTTCTGAGCCTATCTGGGGAAATTTTTGCATATCTAGGCATGTCACCATCACTATTATTTCTTTTAAAAAAATCAACAATCTAAACAGTTATAAATCACATCAATATTCTTTCTAATGAACTCTTCCAAGCACCCTTAAAAACATAACAACAATTTACCTAGCAAGTGCTCTTCTATTTCCCCTCCTAAGTGAATGAAACAGCTCCTGTTTAAAATTCAAGATGGTAAAACTTGTAAAGAGTTACCTGCGATTATCCCTCAAGATCACAAACATAACAATAGGATTTATGGGCATTGCAATGCTCATCTATGGTGTATGGATGATCAGAGTTTGGCAGCGCGATGCTGCCAACTCACCCTCATCCCCTGATTATGCTCAATTTCCTTG............................................................................................GTTTATCCATGCATTTCTTGGTGTTGGCACTGCTTTGTGTGCAATCACTTTCCTTGGTCATGTTGCAGCAAGCACTGCCAATTCCTATTGCCTCTCATTT....................................................................................................................TATATGTTCTTCATATTTGTGCTTCTTTTAGCAGAGATTGCAATTACAGCTGATGTTTTCTTGAACTCTGATTGGGAGAAG.........................................................................................................................................................................................................................................................................................................................................................GATTTGCCTGAAGATCCATCAGGAAGGTTTGATGATTTCAAGGATTTTGTGGACTCGAATAGCGATGTCTGCCAATGGATTACCCTGCTTTGTGTTCTAACACAG...........................................................................................GGATGTTGTATCTTATTGGCTACAATTCTAAGAACTCTTGGGCAAGTTAAGGAAAATAGTCATGAGTATGAAGGTGAATATGCAGAACCATCAGCTCCACTTCTTCGCCCTCCGCAACTGCCTCCAAATCCTCTGTATCCATATGTTATTGGTGAACCAGTTCATATTGAACCACATTCTGCCTACAAGAATGTTTGAGTTTTGGAAGACAATTGGTTTGATCCCTTTGTAAAACTATGAAATCTTGAAACCTCTCTTTTTGGCTTATTATGTTATTGAAGTTTGCAGAAGTTGAAGTGAATGAAGTTATCCTTTATGGAAAAATATGCTATGTAGCTTTTCCAATTGCTTAAGAATGAGCTTTGTTAATCAGAAACAGATGAGACCATTTTATGTATAATTAAGATTGTGAGTTTTGCAACTTTTATGTTTTTGAGTGGTATCATTTTTGTTTATTACAATGAACAATGATATTACATTGTTTATGCATGTTGAACTTTTTTGGACTTTTTCATATATTAAACTCTCCTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U569242" ref_strand="+" ref_description="SGN-U569242 Tomato 200607#2 [15 ESTs aligned] (*GB) gi|147854406|emb|CAN81292.1| (e_value=0) hypothetical; (*ATH) AT4G17020.1 (e_value=0)  Symbol: None | transcription factor-related, contains weak similarity to Swiss-Prot:Q92759 TFIIH basal transcription factor complex p52 subunit (Basic transcription factor 52 kDa subunit, BTF2-p52, General transcription factor IIH polypeptide 4) (Ho... ; (*SWP) sp|P60027|TF2H4_PANTR (e_value=9e-74) General transcription factor IIH subunit 4 OS=Pan troglodytes GN=GTF2H4; ">
      <seq>tatgtattagcagaaattaggggagaatcatcatcattcaacaacagctaaaaccctagattgagaaattgaagtattgaaaacctttatttgatctataacaacaatgccgcaagtgaagatcgtcgccaggaatttcatggacatggtggcttcattgcctgtcatgaaactcgacatgctttacgacaattcctttatctgtgaagccattcttagatcgttacctcccttagcgaagaagtatgtgctgcaaatgttgtatatagacataccaattacagccaagtcgatggaggagtgggtgcttccagatggattctcaaagcataaagttgccattgatagattgatacagctgagagtaatgacagaaacatttgacaggaaaaaggaagccatgtatcaactaaacccaaaatttcaatttaatcttcagaagcatatagtctatggtggagtcttaccaagggaaccaatgccttctaatatcactgtgaggcttcctagcttggaggagttagaggcatatgctgtcgaacaatgggagtgctttctgctgaaccttataagctccagtgaagctggaaagaccacaaacataagctcttcgatgatgaaaatcttccagcgtggacttttaagtcagagagacgatagagaacctccaaggttgactgaaagtgggttccaattcttgctaatggacacaaatgcacagctttggtacatcatcagggagtacataacaaatgctgaggagcgaggagtggattcagcagatcttattgcatttcttttggagctaagctttcatgttactggcaaggcatacaatacaaacacaataactgatctccagagaagtataattaaggacctttcagatttgggattggtcaagctgcagcagggaaggaaagagagttggtttattccgaccaaactggcgaccaacctgtcaattagcttagcggatacaactactaggaaacagggttttatcgttattgaaacaaacttcagactgtatgcatattcaacatcaaaattgcactgtgagatcctacgcctttttgcaagggtggaataccagcttccaaatctcattgttggtgctattaataaagagagtttatataaagcttttcaaaacggcattacttctgagcagatagtttctttccttcagcagaatgcacatcctagggttgccgagagaataccatctgtgccggagaatgttactgatcagattagattgtgggaatctgatctgaatcgggttgagatgacgccagcccacttctacgatgaattcccttctaaagatgtctttgaggctgcctgtgattttgccagagaatatggaggattactgtgggaggactctaagcgcatgcgtctcgttgttaaagctgatattttagccgagatgaaggaatttcttcgtcgtcaaaagcaataactcttctttgcatactgtcttcatttaaatgaagggtttcatcagttatgtccatctatatatttattcccaacttaacttgtacatgaattttgttgtgggtgtattgtatttcattgtgcttcgatttccttctttcgacaccttgtgatgttgtactaataatgggactacaaatcatcgtcaaaactattgattagcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="-" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="12225" stop="5003"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11925" g_stop="11707" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11706" i_stop="11235" i_length="472">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11234" g_stop="11067" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="387" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11066" i_stop="10401" i_length="666">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="10400" g_stop="10332" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="388" r_stop="456" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="10331" i_stop="9764" i_length="568">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="9763" g_stop="9670" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="550" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="9669" i_stop="9502" i_length="168">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.802" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="9501" g_stop="9401" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="551" r_stop="651" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="9400" i_stop="9270" i_length="131">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.833" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="9269" g_stop="9221" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="652" r_stop="700" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="9220" i_stop="9143" i_length="78">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="9142" g_stop="9083" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="701" r_stop="760" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="9082" i_stop="8407" i_length="676">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="8406" g_stop="8338" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="761" r_stop="829" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="8337" i_stop="8027" i_length="311">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="8026" g_stop="7943" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="830" r_stop="913" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="7942" i_stop="7848" i_length="95">
            <donor d_prob="0.434" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="7847" g_stop="7764" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="914" r_stop="997" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="7763" i_stop="7425" i_length="339">
            <donor d_prob="0.787" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="7424" g_stop="7339" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="998" r_stop="1083" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="7338" i_stop="6991" i_length="348">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.954" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="6990" g_stop="6900" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1084" r_stop="1174" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="6899" i_stop="6145" i_length="755">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="6144" g_stop="6064" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1175" r_stop="1255" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="6063" i_stop="5813" i_length="251">
            <donor d_prob="0.704" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="5812" g_stop="5738" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1256" r_stop="1330" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="5737" i_stop="5643" i_length="95">
            <donor d_prob="0.697" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="5642" g_stop="5303" g_length="340"/>
          <reference_exon_boundary r_type="cDNA" r_start="1331" r_stop="1671" r_length="341" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="-" ref_id="SGN-U569242" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1670</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U569242" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11925" e_stop="11707"/>
          <exon e_start="11234" e_stop="11067"/>
          <exon e_start="10400" e_stop="10332"/>
          <exon e_start="9763" e_stop="9670"/>
          <exon e_start="9501" e_stop="9401"/>
          <exon e_start="9269" e_stop="9221"/>
          <exon e_start="9142" e_stop="9083"/>
          <exon e_start="8406" e_stop="8338"/>
          <exon e_start="8026" e_stop="7943"/>
          <exon e_start="7847" e_stop="7764"/>
          <exon e_start="7424" e_stop="7339"/>
          <exon e_start="6990" e_stop="6900"/>
          <exon e_start="6144" e_stop="6064"/>
          <exon e_start="5812" e_stop="5738"/>
          <exon e_start="5642" e_stop="5303"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGTATTAGCAGAAATTAGGGGAGAATCATCATCATTCAACAACAGCTAAAACCCTAGATTGAGAAATTGAAGTATTGAAAACCTTTATTTGATCTATAACAACAATGCCGCAAGTGAAGATCGTCGCCAGGAATTTCATGGACATGGTGGCTTCATTGCCTGTCATGAAACTCGACATGCTTTACGACAATTCCTTTATCTGTGAAGCCATTCTTAGGTATTCTAAAAATCCCCAATTTGATCGAATGTTAAGAGTTTTTCTTGCTGCACAACCAGTTATAGGATTAATTTCTGCTTGTAAAAATGGATGTAATTTCACCATTTTAGCATATAGTGATATGTACTGTGTACATTTGGATGCAAAAGTTGTTTACTTTGTCTTTAAGATTATTATTATGGAGAAATGAACTTCAAGCTATAGTCATAGATGGATGAAGTTAATCAGCAGCAAGTGCTGTGCTGACACAAGTATAAACATACACAAGCACAAATTTTTTAATGTTTGACTGTTTTTATAGAAAGTATTTGGAGTATATTTTTTTTTGTATCCATGGCAACAAGAGATTGATTAATTCACTAGTACTTAGCACTCACTGTATTCACCTCGAGCTATATCAAGGGAATTCACTTTTGGTGATACTATTTTGAAACATGTTATATTATGTGCTTAATTTGTTCATTTCTGCTAGATCGTTACCTCCCTTAGCGAAGAAGTATGTGCTGCAAATGTTGTATATAGACATACCAATTACAGCCAAGTCGATGGAGGAGTGGGTGCTTCCAGATGGATTCTCAAAGCATAAAGTTGCCATTGATAGATTGATACAGCTGAGAGTAATGACAGAAACATTTGACAGGTTATTGAGCAGATTCTTCTCTCTTGATAGCTGCTATATTTTTGTCTTGAATAACGCTGACCTATAACAACATTTGACACTTAAATTTTTATTTGGTTGTTATAAGCAAAAAAGAGATGCAAAAAATCTAATTTTTAATGTGAGAAAAGAGGATAAACTTGTTAAATTTAAAATCTCAGAAGTAATCATATTTCAGCAATTCAAAATTAAATAATGCTTGTACATTATCAATGAATTTTGACCCTTACAAGATGGAGTTTTTATCTCTAATGGAATACAAAGTCACTGCCTGTTGTTAAATTTCCTCCTCAACCGGAGGCGGATGCTATATAGAGGTCTGTATTTACTTTTCCCGCTTGATCCTATCTGGTTGTCATGTTTTTCACTTAGCACTTTAAATACACATGAGCAAAGTTAGAACTTTGGTCAAAATAAGCAAAAGCATGATTAAAGGGAATATCTTGAATTGTTAATGCTTGATCTTTCTTTTGTTTTTTCCTTTTAAGTTTTGCTCTTTATAAGCATTATAGAAGTTTTAGGTAGTAGAAATCATGTCTCAACTATTGGAATGACGAAATCTGGTCAGGGTGATCCACAATATCTTTGCATGTTGTTATAGTCAGTTTTTGATTGTTGAACGTTGCCATTCTCTTTGATTTCTTACAGGAAAAAGGAAGCCATGTATCAACTAAACCCAAAATTTCAATTTAATCTTCAGAAGCATATAGTCTATGGGTAAGCTTTATTATCTTATTTATGTTATTTTCTCTGTAGGTGTTAATGATCACTACTGGCCAGCCCTCTCTGAGATGGGTGATCTAAAAATGAAAGTACATGTACAGTTAGTAGAAGTACTAGTCAATGACATTTGGCGTCTAGACACCAGATTCATGGCCTATTAATCCCCGTCTCGAAGGAACGATTTCTTTACTCATTTGCATATTTGAATAAAGTTGGCCCAAATTGAGTTGAGTTAATATAGAGAATTGATGTAGGTGACTGCAACTAGTTTGGGATTGATCGATTGAGGCATAATTATTATTATTGTTGTTGTAGGTATATTCACACTTGTGTATATGTTCCATTTTATTCATCCTATATGACTTCTTGATTTGTCTTGCTAAATTTCTAATTGGGCTCAAGTTCAGAATTTGACCCTGATACATTTGACCCTCAGTTGACCTATAAGATGCTAAACTTGATACAGTAACTTGTTGTGGTAATACTTCTACATGATGCTGAAATATCTGTCTTAACCTTGGTCTTGTAATTGCACTATAATATGTGATTTCAATTACTGTAGTGGAGTCTTACCAAGGGAACCAATGCCTTCTAATATCACTGTGAGGCTTCCTAGCTTGGAGGAGTTAGAGGCATATGCTGTCGAACAATGGGAGGTATGACTTGCATTTTGTTAGTAGTTCTTATCCGTTGATTTTCCAGGAGCGTTCAGAATGTGTAATAATATGTTGTGAGACAATCTGCTTTTCTTTCGGTCTTGATCAAACTGCAGCCTGAATATAATTTTGGCAACTATTTTTATGACTTGCAACTGTCGCAACCAGTGCTTTCTGCTGAACCTTATAAGCTCCAGTGAAGCTGGAAAGACCACAAACATAAGCTCTTCGATGATGAAAATCTTCCAGCGTGGACTTTTAAGTCAGAGGTACGTCCACCTCAGTGTTATGGATATATATTTACTCGCAGAAAACATATGTATAGTTCTTTGTCCTCATGTGTATTTATGATTTTGTAATAATCGATATAATCTCCATGAGTTCATGCCTTCTTAAGCAGAGACGATAGAGAACCTCCAAGGTTGACTGAAAGTGGGTTCCAATTCTTGGTACGATTTACTGAATTATCTGAATCAATTAGTGTTCTTTTTTGTTGGGAAATTGTATTGACTGGTGGCATATTACAGCTAATGGACACAAATGCACAGCTTTGGTACATCATCAGGGAGTACATAACAAATGCTGAGGTATTGCTGACCACCTCCTTCTCTCCCTGCATGTGTGTGTATGTGTGTCTCAAGCTCCATTGGTTCATTGGGTGGTGTTGTAATTCAGTTACATTTGACATTTGCTTATCCCTCACTTTTGCGGCTAGTCTTCTGATAGACTTTGGAGATAGGTAGGGAGGAATTTTCAGAGATGCAGCTTCGGCCTTTGTAGAGCTTGCTATAATTATATCACCTACTCTGCCTCTCTAAGGTCGTCAAAGCGAAAGCATTCCCAAGCCTGAATAGAGGAAGAGAGTTGAGGGAAACCGGTGGCGAATGTAGCAATAGTCAAACTATTTTGAATACTGAAAAAATGTGCAGATTGGATACAGGCGTTTCATACAAGATCATATAGCTAACCCCAATTAGTTTGGGGATTGGAACCTAGTTGAGTTGAGCTTATTAGTTCCACCTTAGATTTTATCGTTGCTGATAACATATTTTAGGCACTTTTTCCTTGTTTCCTTACCTCTTTAAATTAGTTAATACAAGCAAGAATCAAGAAGATATTCTTTCTTTGATTTAAGATTTTGGTTGAGAAGATATTGTGCCTATGACCATTATTTGGATTGTCTAGTATGGACTTCTATTTGTATAACTTTTGGACAATTTAATGATATTAAATGATTACTCTGTATTTTTCATATTAATGCAGGAGCGAGGAGTGGATTCAGCAGATCTTATTGCATTTCTTTTGGAGCTAAGCTTTCATGTTACTGGCAAGGTATTATTAGACAGTTCTAGAGCTTCTTGAATTAAGTTTGTCCTGGAGCTGTAGTAATGATACCATCTTTTGAACTCTAAATGCTTGAATTTTAGTTAGTTCTGGTTCTGGAGCACTCAGATGTTTGGTTGAAAAGTGGTGAATTTGTTTTTGCAGAAAGTTTTGTACTTTGACTTTAAAAAACAATATTTGAAAAACTGAAAAATATTGTGACGAAGTCTTTCAACCATTTTCCCAACCACACAGTTGTAATCTTCATTTCTTCAGTATGCTCAAGTTTCGTATGTTTGTTGAATTTTCTTCTGATATAGGCATACAATACAAACACAATAACTGATCTCCAGAGAAGTATAATTAAGGACCTTTCAGATTTGGGATTGGTCAAGCTGCAGCAGGTGAATACTCCTTGTTGCCCCATCAATGAGCTCACGAGAGTGAAAAGATTTGTCTTTTTTATTATGTTCTTAATTACCCATTTGATGCTGTTTAGGGAAGGAAAGAGAGTTGGTTTATTCCGACCAAACTGGCGACCAACCTGTCAATTAGCTTAGCGGATACAACTACTAGGAAACAGGTATGCTGCACTCGCAAGTGTTCCCTAGAGTAGTTGGGTCTAGTTACACAGAAATCCAATTTATTTATTTGTTTTCTATCTTTGTTCTTACAGTTTTCTTATAAAGCAAGTGTGTACAGAAATTTTTGAATTTTATGCTTCCTGTCATCCAGATTTTTTTTGATAATGAAAAAAAATAAATAAAAAAATCTGGATGACAGGAAGCATAAAATTCTAAATTTCTGTATACACTTGCTTTATAAGAAAACCGTAAGAATAAAGATAGCTTAGTTTGAAACGAGTTCAATGATACCTTACTGACTGCAAATGCATCTTTGCCTTCCCACCCACACTCATCAGGGTTTTATCGTTATTGAAACAAACTTCAGACTGTATGCATATTCAACATCAAAATTGCACTGTGAGATCCTACGCCTTTTTGCAAGGTACCAAACGATTTGCTGCTGCTGCTTGTGTTTTTTTCTGTAGTTTGGTTGAGAAAAGAGATCATATGGAAAGAACAGGTGCTAACTCTCCTCTTGATAGCATTACCTGGACTCTGTTGCTACTTTTTGTTGGAATTAATACCATCAAATCTGACACTAGTCTGGTGCTTGCCAAGAAATGCATTACTTGTATCATTTGCGAGTTGAGATAAGAACTTGTCCAATTATTCATGGGTTATGCCTAATACTCTGTGTTTGGCTGTTGAGTGTATATTTTCTAGTAGTAGATTTCTTTCATCAACTTTTGTGGTTAGATTTCTAAGTAACAAATTTTAGCTGCAAATACAGGGTGGAATACCAGCTTCCAAATCTCATTGTTGGTGCTATTAATAAAGAGAGTTTATATAAAGCTTTTCAAAACGGCATTACTTCTGAGCAGGCAAGTTTCAGCTGCTATTTATTTATTGACCAGCATTGTCTTGTATCAGAGACAACTAACTAAAAAACTATCTAATAAAGCAACTGTATATGGAGTGCTTGCTATATTTGTTGAAGATTTTTTTTTTGATGATGTGTGGAATGCTTATATTTGTATAAAAGCAAAACGTTGACAAAGATTGATGATGTGGGACATTTTTGTTGGAAGTTCTTAGTAATTCTTCATCAGCTACTTATTGTGGTCTAATTGATAGATGTTGATTAATTGCACTCCTCTCAGAAAAGGTCCTTCTATAGTTTTGTTTCTGGTCCTTTAATCTACTTATCATGTTTAATAGTAGTTACACACCTTTCAAAATTAGCACACCCTTGAATGCATTAATGGAATTAGTGAGCCTATTGTGCTTCTGGTGCCAAAGTTCTTACTGCAGTACCGCACTTAAATATTTTGTATGAAGTAGAAAGAGTTAAATATGACATAATGGAAACTGTTGCTTGAGTTGTCTGGACTGGTTATATTTGAGTTCCAGTTATCCTATCCTTAGTTGTCAAAATACATTGACTTAGATGTCATGGTCCCCCCAAAAAGGAACAATCTGTCATATGGTGATTCGTCAGTCAAAAATGTTTCAAGTGATACTATGAAGTATTCTGTACGGATGTAATTATACAACACAAATGAGCAGCTACTCTACAATTTATTTTGCTTGTAGTTAAGTTTTGACTGCTGTTGTGATTTGAATGCATGGATTGCAGATAGTTTCTTTCCTTCAGCAGAATGCACATCCTAGGGTTGCCGAGAGAATACCATCTGTGCCGGAGAATGTTACTGATCAGGTTCCTTCACTATTTCTCATAGCGTTGAAACTGAAAGATAGCTTTAGAAACCAAATATTACTCTAACTGCACCACATTTAATTGACACTCCTGTAGAATTTGTTCTTGACTAGGCACACGTTGCCAAAATTATGGCGGACCAAAGTCTATTCAAACAATCCATTGACAGAGATATAACTTATGAAAAGATTTATTGGAAAATAAGTTCTTGTCCAACTAACTTATTCAACTGCCACTTTCTCATGCCACAGATTAGATTGTGGGAATCTGATCTGAATCGGGTTGAGATGACGCCAGCCCACTTCTACGATGAATTCCCTTCTAAAGTGGGTATCAAGCACCATGTTATTTGCATTGCAACCTAAACTTCGCTTTTTAATATGTTTGTTTGCGTAACATGATTGTGGTTGCTTACTTTTAGGATGTCTTTGAGGCTGCCTGTGATTTTGCCAGAGAATATGGAGGATTACTGTGGGAGGACTCTAAGCGCATGCGTCTCGTTGTTAAAGCTGATATTTTAGCCGAGATGAAGGAATTTCTTCGTCGTCAAAAGCAATAACTCTTCTTTGCATACTGTCTTCATTTAAATGAAGGGTTTCATCAGTTATGTCCATCTATATATTTATTCCCAACTTAACTTGTACATGAATTTTGTTGTGGGTGTATTGTATTTCATTGTGCTTCGATTTCCTTCTTTCGACACCTTGTGATGTTGTACTAATAATGGGACTACAAATCATCGTCAAAACTATTGA-TAGCCT</genome_strand>
        <mrna_strand>TATGTATTAGCAGAAATTAGGGGAGAATCATCATCATTCAACAACAGCTAAAACCCTAGATTGAGAAATTGAAGTATTGAAAACCTTTATTTGATCTATAACAACAATGCCGCAAGTGAAGATCGTCGCCAGGAATTTCATGGACATGGTGGCTTCATTGCCTGTCATGAAACTCGACATGCTTTACGACAATTCCTTTATCTGTGAAGCCATTCTTAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTTACCTCCCTTAGCGAAGAAGTATGTGCTGCAAATGTTGTATATAGACATACCAATTACAGCCAAGTCGATGGAGGAGTGGGTGCTTCCAGATGGATTCTCAAAGCATAAAGTTGCCATTGATAGATTGATACAGCTGAGAGTAATGACAGAAACATTTGACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAAGGAAGCCATGTATCAACTAAACCCAAAATTTCAATTTAATCTTCAGAAGCATATAGTCTATGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGTCTTACCAAGGGAACCAATGCCTTCTAATATCACTGTGAGGCTTCCTAGCTTGGAGGAGTTAGAGGCATATGCTGTCGAACAATGGGAG........................................................................................................................................................................TGCTTTCTGCTGAACCTTATAAGCTCCAGTGAAGCTGGAAAGACCACAAACATAAGCTCTTCGATGATGAAAATCTTCCAGCGTGGACTTTTAAGTCAGAG...................................................................................................................................AGACGATAGAGAACCTCCAAGGTTGACTGAAAGTGGGTTCCAATTCTTG..............................................................................CTAATGGACACAAATGCACAGCTTTGGTACATCATCAGGGAGTACATAACAAATGCTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCGAGGAGTGGATTCAGCAGATCTTATTGCATTTCTTTTGGAGCTAAGCTTTCATGTTACTGGCAAG.......................................................................................................................................................................................................................................................................................................................GCATACAATACAAACACAATAACTGATCTCCAGAGAAGTATAATTAAGGACCTTTCAGATTTGGGATTGGTCAAGCTGCAGCAG...............................................................................................GGAAGGAAAGAGAGTTGGTTTATTCCGACCAAACTGGCGACCAACCTGTCAATTAGCTTAGCGGATACAACTACTAGGAAACAG...................................................................................................................................................................................................................................................................................................................................................GGTTTTATCGTTATTGAAACAAACTTCAGACTGTATGCATATTCAACATCAAAATTGCACTGTGAGATCCTACGCCTTTTTGCAAG............................................................................................................................................................................................................................................................................................................................................................GGTGGAATACCAGCTTCCAAATCTCATTGTTGGTGCTATTAATAAAGAGAGTTTATATAAAGCTTTTCAAAACGGCATTACTTCTGAGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGTTTCTTTCCTTCAGCAGAATGCACATCCTAGGGTTGCCGAGAGAATACCATCTGTGCCGGAGAATGTTACTGATCAG...........................................................................................................................................................................................................................................................ATTAGATTGTGGGAATCTGATCTGAATCGGGTTGAGATGACGCCAGCCCACTTCTACGATGAATTCCCTTCTAAA...............................................................................................GATGTCTTTGAGGCTGCCTGTGATTTTGCCAGAGAATATGGAGGATTACTGTGGGAGGACTCTAAGCGCATGCGTCTCGTTGTTAAAGCTGATATTTTAGCCGAGATGAAGGAATTTCTTCGTCGTCAAAAGCAATAACTCTTCTTTGCATACTGTCTTCATTTAAATGAAGGGTTTCATCAGTTATGTCCATCTATATATTTATTCCCAACTTAACTTGTACATGAATTTTGTTGTGGGTGTATTGTATTTCATTGTGCTTCGATTTCCTTCTTTCGACACCTTGTGATGTTGTACTAATAATGGGACTACAAATCATCGTCAAAACTATTGATTAGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574214" ref_strand="+" ref_description="SGN-U574214 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|157336259|emb|CAO70944.1| (e_value=4e-54) unnamed; (*ATH) AT1G48320.1 (e_value=6e-53) | Symbol: None | thioesterase family protein, similar to ComAB (Bacillus licheniformis) GI:1834379; contains Pfam profile PF03061: thioesterase family protein | chr1:17858481-17859316 REVERSE | Aliases: F11A17.13, F11A17_13; (*SWP) sp|P45083|Y1161_HAEIN (e_value=2e-11) UPF0152 protein HI1161 OS=Haemophilus influenzae GN=HI1161; ">
      <seq>agaaacggtgccctttcatattccacctaccacaaactctatcgtttgaccttcttcctcctcactgcaaaccaaaccccaatgattaaatcttcatcttcaatctgctttttacctgccacttcaaatcaacattcttgattttcataatcagatccaaaatttcataatatttgaatcaaagactgaaactttattgtatcaatctggttcccttcaaatcaagattcttgattcccacaaacatatcaaagattcaccatatttgactccaagactgaaactttcttgtgtatatatcttttcattgttgagaaattgatgtatatgactttgaaggaagcatagtctgttcttttcaagatttgaagagtgaaaaagagacacagaatatgggatcaccatcagcagcagcagcagcaggggtaaaggctagagttttagatattccacttcatgggattggttttgagtttgtagaaatcacaccccacaaaatcactggtcgtcttcctgtgacagataagtgttgtcagccatttaaggtgctgcacggtggagtttcagctttgatggctgagtctctagcaagtatgggagcacacatggcttctggttttaagagagtggctggagttcatctaagcatccatcatctcaagagtgctcatttaggggaccttgtgtttgctgaggctgtgccaatcaatattggcaaaagtattcatgtttgggaagtttgtctctggaagattgatccagctaatgaggaaaaaaagactttgttagcatcatcaagagttactcttaaggtcaacatgtctatacctgaaaatgctaaagatgctgctgtgaatctcaagaaatatgctaagttatgatcatgtttaattgagtttgtttgtaagcaaaattgtagagagtaacaagacaataatgcagagttatgcaaaacatgttgtaaacccctttgacattttctgtcctgacacgtttttatgaaaaagtacccaaaaaagagtgtaatctacattatctggagtagttactaatttctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="+" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="17365" stop="19024"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17665" g_stop="18724" g_length="1060"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1060" r_length="1060" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="+" ref_id="SGN-U574214" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1060</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U574214" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17665" e_stop="18724"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACGGTGCCCTTTCATATTCCACCTACCACAAACTCTATCGTTTGACCTTCTTCCTCCTCACTGCAAACCAAACCCCAATGATTAAATCTTCATCTTCAATCTGCTTTTTACCTGCCACTTCAAATCAACATTCTTGATTTTCATAATCAGATCCAAAATTTCATAATATTTGAATCAAAGACTGAAACTTTATTGTATCAATCTGGTTCCCTTCAAATCAAGATTCTTGATTCCCACAAACATATCAAAGATTCACCATATTTGACTCCAAGACTGAAACTTTCTTGTGTATATATCTTTTCATTGTTGAGAAATTGATGTATATGACTTTGAAGGAAGCATAGTCTGTTCTTTTCAAGATTTGAAGAGTGAAAAAGAGACACAGAATATGGGATCACCATCAGCAGCAGCAGCAGCAGGGGTAAAGGCTAGAGTTTTAGATATTCCACTTCATGGGATTGGTTTTGAGTTTGTAGAAATCACACCCCACAAAATCACTGGTCGTCTTCCTGTGACAGATAAGTGTTGTCAGCCATTTAAGGTGCTGCACGGTGGAGTTTCAGCTTTGATGGCTGAGTCTCTAGCAAGTATGGGAGCACACATGGCTTCTGGTTTTAAGAGAGTGGCTGGAGTTCATCTAAGCATCCATCATCTCAAGAGTGCTCATTTAGGGGACCTTGTGTTTGCTGAGGCTGTGCCAATCAATATTGGCAAAAGTATTCATGTTTGGGAAGTTTGTCTCTGGAAGATTGATCCAGCTAATGAGGAAAAAAAGACTTTGTTAGCATCATCAAGAGTTACTCTTAAGGTCAACATGTCTATACCTGAAAATGCTAAAGATGCTGCTGTGAATCTCAAGAAATATGCTAAGTTATGATCATGTTTAATTGAGTTTGTTTGTAAGCAAAATTGTAGAGAGTAACAAGACAATAATGCAGAGTTATGCAAAACATGTTGTAAACCCCTTTGACATTTTCTGTCCTGACACGTTTTTATGAAAAAGTACCCAAAAAAGAGTGTAATCTACATTATCTGGAGTAGTTACTAATTTCTTTG</genome_strand>
        <mrna_strand>AGAAACGGTGCCCTTTCATATTCCACCTACCACAAACTCTATCGTTTGACCTTCTTCCTCCTCACTGCAAACCAAACCCCAATGATTAAATCTTCATCTTCAATCTGCTTTTTACCTGCCACTTCAAATCAACATTCTTGATTTTCATAATCAGATCCAAAATTTCATAATATTTGAATCAAAGACTGAAACTTTATTGTATCAATCTGGTTCCCTTCAAATCAAGATTCTTGATTCCCACAAACATATCAAAGATTCACCATATTTGACTCCAAGACTGAAACTTTCTTGTGTATATATCTTTTCATTGTTGAGAAATTGATGTATATGACTTTGAAGGAAGCATAGTCTGTTCTTTTCAAGATTTGAAGAGTGAAAAAGAGACACAGAATATGGGATCACCATCAGCAGCAGCAGCAGCAGGGGTAAAGGCTAGAGTTTTAGATATTCCACTTCATGGGATTGGTTTTGAGTTTGTAGAAATCACACCCCACAAAATCACTGGTCGTCTTCCTGTGACAGATAAGTGTTGTCAGCCATTTAAGGTGCTGCACGGTGGAGTTTCAGCTTTGATGGCTGAGTCTCTAGCAAGTATGGGAGCACACATGGCTTCTGGTTTTAAGAGAGTGGCTGGAGTTCATCTAAGCATCCATCATCTCAAGAGTGCTCATTTAGGGGACCTTGTGTTTGCTGAGGCTGTGCCAATCAATATTGGCAAAAGTATTCATGTTTGGGAAGTTTGTCTCTGGAAGATTGATCCAGCTAATGAGGAAAAAAAGACTTTGTTAGCATCATCAAGAGTTACTCTTAAGGTCAACATGTCTATACCTGAAAATGCTAAAGATGCTGCTGTGAATCTCAAGAAATATGCTAAGTTATGATCATGTTTAATTGAGTTTGTTTGTAAGCAAAATTGTAGAGAGTAACAAGACAATAATGCAGAGTTATGCAAAACATGTTGTAAACCCCTTTGACATTTTCTGTCCTGACACGTTTTTATGAAAAAGTACCCAAAAAAGAGTGTAATCTACATTATCTGGAGTAGTTACTAATTTCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582182" ref_strand="+" ref_description="SGN-U582182 Tomato 200607#2 [55 ESTs aligned] (*GB) gi|157329483|emb|CAO40457.1| (e_value=0) unnamed; (*ATH) AT4G04955.1 (e_value=0)  Symbol: ATALN | Encodes an allantoinase which is involved in allantoin degradation and assimilation. Gene expression was induced when allantoin was added to the medium. The insertion mutant, ataln m2-1, did not grow well on the MS medium where allan... ; (*SWP) sp|Q82LL4|ALLB_STRAW (e_value=1e-83) Allantoinase OS=Streptomyces avermitilis GN=allB; ">
      <seq>aaaagaaaacaaactttttgcagtataaagtggaagccattaatgcacaagagatcatacacaaagaaggctgagggttagcagagaaacatggaatctggaaagaagagtactctggctctgctaccactcttcctttctttcctgttttactttgatttctcaaaaaagcttccctcaagtgactgcagccttctgcctcataatcactattggatatccagcaaacgtattgtgactccaaacgggacaatttccggtgcagttgagataaaggaaggaagaattatatctgttgttgctgaagagaattggcatgtaaattctcggtttaccacagtggtcaattatagggagtctgtggtcatgcctggatttattgatgtgcatgcccatcttgatgatcctggaagatcagaatgggaagggtttccttcaggaacaaaagcagctgctgcaggtggagtaaccacattagttgacatgcctcttaatagtgctccatcaacagtttctgaagagactttaaaacttaaggtacaggctgcagaagggagggtctacgtggatgttggtttctggggaggtttggttccagaaaatgcagaaaatacaagttctctggaaagacttctaaatgcaggggttctgggattgaagtcttttatggtgccatcaggcatcaatgactttcccatgacaactgcatcccacataaaggaggcactcccaactctggctcgatacaaaagacccctacttgttcatgccgaagtgctagtagatcttgatgaaaaagtggagctggaggatggggtagagaatgctagatcatactctacatatctcaagaccaggcctgcttcaatggaagaggctgctatcaatcagctcataacactgtcaaaggacgcgagggctggtggttctgctgaaggagctcatctccatattgttcatctatctgatgctagaacttcactaaacctcattaaggaagccaaacaaaggggtgatagcatcaccgttgaaacttgcccccattatctcgcttttgcagctgaagatattcctgatggagatactcggtttaagtgtgctccacccattcgtgatgcagccaataaagaaaaactatgggatgcgttactggatggagatattgacatgttaagttctgaccactcgccttctgtgccagaaatgaaactcttagatgagggagacttcttgaaagcatggggtggcatatcttccttacagtttgttctacccgtgacatggacacatgggcgtaagtatggaataacatatgagcagttggcttcttggtggagtgagaagcctgccaaacttgcaggtctaacgactaagggggcaattgctgtggggaaccaagcagatatagttgtttgggagccagacatggagttcgacctggataatgactaccctgtacatattaagcaccctagtatatccgcatacatgggatcaagactctctgggaaagttttggcaacctttgtgggcggaaatctggtatacaaggagggaaatcatgcttctcaagcatgcgctctcccaattcttcataaatagttagtgctacgagcctattggttggagacgaccacatggcatgacatgtagatggaattgataacactgtcattcagatcaaaacaaatctttgcatggatctaagttgttcatcgtcttaactcttcttttaggcgtgcaacagggctggagtgtatataatctgttgtacgcccttagttgatagtcattcgatatttaactctgtagaaaataaatatgtcactttaagctgaaagctcttgttgttgatgaagtacacattaagacttgaatacatcttcatagttacaaattccatgagaaactaatatcaacttaattttgtctttctagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="+" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="25612" stop="33383"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25912" g_stop="26082" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26083" i_stop="26867" i_length="785">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.815" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26868" g_stop="26961" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="265" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26962" i_stop="27064" i_length="103">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27065" g_stop="27185" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="386" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27186" i_stop="28507" i_length="1322">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28508" g_stop="28581" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="460" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28582" i_stop="28820" i_length="239">
            <donor d_prob="0.894" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28821" g_stop="28897" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="537" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28898" i_stop="29167" i_length="270">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="29168" g_stop="29204" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="538" r_stop="574" r_length="37" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="29205" i_stop="29276" i_length="72">
            <donor d_prob="0.334" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="29277" g_stop="29362" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="575" r_stop="660" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="29363" i_stop="29649" i_length="287">
            <donor d_prob="0.477" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="29650" g_stop="29709" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="661" r_stop="720" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="29710" i_stop="29875" i_length="166">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="29876" g_stop="30024" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="721" r_stop="869" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="30025" i_stop="30332" i_length="308">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="30333" g_stop="30459" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="870" r_stop="996" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="30460" i_stop="30818" i_length="359">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="30819" g_stop="30974" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="997" r_stop="1152" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="30975" i_stop="31067" i_length="93">
            <donor d_prob="0.818" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="31068" g_stop="31178" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1153" r_stop="1263" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="31179" i_stop="31806" i_length="628">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="31807" g_stop="31917" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1264" r_stop="1374" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="31918" i_stop="32145" i_length="228">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="32146" g_stop="32244" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1375" r_stop="1473" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="32245" i_stop="32519" i_length="275">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="32520" g_stop="32668" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1474" r_stop="1622" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="32669" i_stop="32765" i_length="97">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="32766" g_stop="33083" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="1623" r_stop="1940" r_length="318" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="+" ref_id="SGN-U582182" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1940</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U582182" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25912" e_stop="26082"/>
          <exon e_start="26868" e_stop="26961"/>
          <exon e_start="27065" e_stop="27185"/>
          <exon e_start="28508" e_stop="28581"/>
          <exon e_start="28821" e_stop="28897"/>
          <exon e_start="29168" e_stop="29204"/>
          <exon e_start="29277" e_stop="29362"/>
          <exon e_start="29650" e_stop="29709"/>
          <exon e_start="29876" e_stop="30024"/>
          <exon e_start="30333" e_stop="30459"/>
          <exon e_start="30819" e_stop="30974"/>
          <exon e_start="31068" e_stop="31178"/>
          <exon e_start="31807" e_stop="31917"/>
          <exon e_start="32146" e_stop="32244"/>
          <exon e_start="32520" e_stop="32668"/>
          <exon e_start="32766" e_stop="33083"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAAAACAAACTTTTTGCAGTATAAAGTGGAAGCCATTAATGCACAAGAGATCATACACAAAGAAGGCTGAGGGTTAGCAGAGAAACATGGAATCTGGAAAGAAGAGTACTCTGGCTCTGCTACCACTCTTCCTTTCTTTCCTGTTTTACTTTGATTTCTCAAAAAAGGTTTGATCTTTATGTTTTTTCTTCTTCTTAAATATACCATTGTTTTTTTTCTTGTGCAGAAAATCCCTTTTTGTAGGATGTGAAAGTGGGGTTGGGGGTGGTGAGGGGAGGATGATAAAAATAAAATTTATTGGTTACCCTTTTTCAAGAATGAGGAAAAGATTAATCTTTCTTAACATTCATAAAGACACACACTCACTGAAATCTAGACTGTGTTACAATGAGATATGTTGTTGTTGATTATGTATTTATTGTACATTTGTGTGATTTTGTGTTTGGATGGTTTGTTTGTGGACAGAGTTTTTTTTTTCCAAATAAGGGAGCTTTTTGTTTTTTTTTAAGAGATTTGATGATGGAATCTTAACAAATTCCAGAAAGCCTCTTCATGAAGCACTTGTCAAAAAAGTTTCTTCATGAAGTTCTTGCATGTGAAATGCTTAAGTACTGTAGATCTGGATATCCATTTTAGCATGTTAGTTATATGATGGAAAGACTGATGGAAAAAGATTTGCCATTAGAAATAGGGAAGGGATTCTTTGTTGGATTCCTGAGATTTTACTGCGAAACATATAAGAAATTTTCTGAATAAAAAAAAAAGTTGGTCAAATTTCAGCATGTCTACATGCAGTACATCTAAGAGCCTTGAGGCAAGCATATGTAATTTAACCTTTGCTAATAGCCATCTACCAGTTTTTATGCTTCATACTATGCTGTACTCAGGTACTATATTTTTGTTCTATAACTTTTGAATGATCCTCAAGAAAGTTTATGGTTTTATACCTCAGCTTCCCTCAAGTGACTGCAGCCTTCTGCCTCATAATCACTATTGGATATCCAGCAAACGTATTGTGACTCCAAACGGGACAATTTCCGGTGCAGGTTTGTTGAACTAAGTTTAAAATTTCTTTGATTTCAGGGAAATTATTAGCTACTTGTTCTCATTCCTGGTGACAAATTGTTTCTCCTGATGTGATGTAAACAGTTGAGATAAAGGAAGGAAGAATTATATCTGTTGTTGCTGAAGAGAATTGGCATGTAAATTCTCGGTTTACCACAGTGGTCAATTATAGGGAGTCTGTGGTCATGCCTGGATTTATTGATGTGTAAGATAAAACTCTATCCTCGTGTTAGTTATGATTTCCCATGTTGTTTCTTAAATTTATGTTAAATCATGAAGAACTTTAAGCAGATTTAGAAAACCTAAACAATTGTTTAGGCCTATGCACTTAATAGCAGCAGATGGGAATTGCTGTGTGGAGAGAAAATTCAAACCTTTTAATGAGAAATTTGAGATATTATTTCACAAGAAAACATGGTATCATAGCTCTTAACTATTGGAAATTCCTTACTGATAAAGGTGTCAAACCTGAATAAGAGTTAATTTTGATGTTCTCTTTACGTTAAGCATTTACAACTCTGGTGTAATTGATACAGTGTGTGCCACTTATATTTAAGCATAATTTGCATTCACTGGAAATTAAGAGGGGGAAGTATTATCATCTTGGAGGTGTTGATGTCTTTGGATTGTCCACACCATGAGTTTTGATCAAGTGTGATGTCTATATACTAATTTGGATTCATTGAATTCCTTAGTATGGAGTTCCATATTTATTTTTAAAACCTTTAACTTCACTGTAAGAGCAGGGTACTTCTTTAACTGATGGAACCTTGAAAGGCTTTCAGATGAGCATAACATGAATCTTTTAGGCAAAAAATGGAAGGGCTTATTGTCATCATCTAGCCACCTGTAACCCAACAAAGCTGTCTGTTGGAAAGAATATGCTGGGTCCTGAAGCATGCTGTTGGTCAAAACGACTTCCTTGATAAGTTGAACTAGGTTTAAAAGTTTGCAGTTATTAGGCAATCAACCTTTTGGTTTTATGGTTCAAGGATGTTGCTTTGTATCAGCAACCAATCACTCATACTGTCGTACATACAATTGCACTTGCACGAGTACCTGAAAACTTAAGGCCGTTTCCACTTACCCTGTCTTACTTATATCCAGAATACCTGCTCTAGTTCTATGAAGTATTTTCTCTGTCATAGACTTCCTAGCTCCAATACTAATCTACAAAACAAATCACAATTCTTCCAGGATGTATGCTATTTCTTTATGAGACTTCATCTCACAAATAGCTGATGATTGAGACTCCAACTAGACCCCAACTAGTATGTCAGAAGTTCGAGTTGTGTGGAAGATTTAGCATAATACTATCAATCCTCCCAGCGAGTGTGGGAGTAAAAATAAAGTAGAATCTTTAGCAGAGTAGTGATGGGAGTCTAAAATCATATACCTGGCTTGTGTTAGTTCTGGCACGATTTAGAGGACTTGAGCTTAGTTTTTGTTTCCTTGCCAATATCAAAACTAGATGATAAGGTTTAACTCATAAAGCCTTGTTCCTAATTATTTTTTTGTCCATTCTAGGCATGCCCATCTTGATGATCCTGGAAGATCAGAATGGGAAGGGTTTCCTTCAGGAACAAAAGCAGCTGCTGCAGGTACATGGATTCAAATTCAAGCTCGTCACATGTAACTTAAACTATTCGAGATGGGTAGCTCTGAATGTGGATAATTATGACATTAATATGAGTTTGTTTCTTTTGAACTTTTTTTAAAATATTTGTAATTTGATGTTGTAGCTGCCTGCCTTATTTTGCTGGATTCAACCTTCAGTGTTCATATGTGTGGGATTACGCAGAACCTAATATCGTGTTTCATATTACAATGTTCTTTGCAGGTGGAGTAACCACATTAGTTGACATGCCTCTTAATAGTGCTCCATCAACAGTTTCTGAAGAGACTTTAAAACTTAAGGTAAGCATGTCATATAGATTTTTGATATATTTTGCAGACCATTTTGACAGAGTAAAACTTACCAAAGGAAACTATTGTTTCTCGCGTGATTATTAGTGCATGTGTTTTTGTTTTTGTTGAGGTCATCTGGTTTTCTAATATGGTGCATCTGTAAGGAGTTTATGGCATTCAAACTAATGAACATATAAAAATGCTAACAGAAGCTCCTGGATTCATATAGGTGTAGTCATATTGAACGACATATAATCAGGGTTACTGTTGTTTTGGCAGGTACAGGCTGCAGAAGGGAGGGTCTACGTGGATGTTGGTATGATTGTGAAGCTTTATTCTTGATTGATTGATGTTGTAGTAAGACGGTACTTACTCTTTGTATTGACAGGTTTCTGGGGAGGTTTGGTTCCAGAAAATGCAGAAAATACAAGTTCTCTGGAAAGACTTCTAAATGCAGGGGTTCTGGGATTGAAGGTATACTGGCAAACATGCATGCACTAGACCTCAGATTGAGCATTCTGTTCCTTTTCAGTTTTTGATATCTTAGCTGTCTTGAAGTCAAGCAAAGATTGATGACATATCCAATATACTAAATACAAAACATTTTTGGACAAGTTAATAACTTCCCAATTATTACCTTACGAAGTGACAATGTAACTTTAATGTTTGAGAGATCATTTTGGGCATCTTTTGTAGCACTCTACTATGTGATTTCAATTAATTTGTCACATTTATAATTGGACATGTTTTCCTTTTTGCAGTCTTTTATGGTGCCATCAGGCATCAATGACTTTCCCATGACAACTGCATCCCACATAAAGGTGTGTAATCTTTCTTCTTTTTTTTCCTTCTCAAGATATATTTTCTTCTGTTTATTTTTGTCAATCATTCTGCAGCAATTATGTAGGTATGACTTCACAGATGGTCATTAGAACCAACCTTATTAGACTCTCTACTATTCTTATGATTTAATGCTTAACTACGCAGGAGGCACTCCCAACTCTGGCTCGATACAAAAGACCCCTACTTGTTCATGCCGAAGTGCTAGTAGATCTTGATGAAAAAGTGGAGCTGGAGGATGGGGTAGAGAATGCTAGATCATACTCTACATATCTCAAGACCAGGCCTGCTTCAATGTAAATATATTACCTTTTATCATATGCTATAATCTAGAGTAGATTTGTGTTGAGATTACATGTCATTCTTCTTGTGTTTCCGGTTGTGTCACATTCTTAACATGTCTGTATGTATTTCCAAGAGGTGTGACAAACATTTCTTTCTGTACTTTCACCTGGTGCATGTTTTAATGTTTTTAAATTTTGTCAAAACGTTCCTCTCTCACTATGATTTCTCTTTCTTATCCCTCTCTCTTCTCTCTTACATCATCTATTTTCTACTGTTTTTTCAAATCGTATTACCTTTTGAAATTTTTGTTCTTTAACAGGGAAGAGGCTGCTATCAATCAGCTCATAACACTGTCAAAGGACGCGAGGGCTGGTGGTTCTGCTGAAGGAGCTCATCTCCATATTGTTCATCTATCTGATGCTAGAACTTCACTAAACCTCATTAAGGTAACAAAACATTTCTCTCAAACTTCTGTGTTCTTTTATTTGTTTTGTATTCTATCCCATTTGTTGCCTTTGTACCCCTTGTACCCTTTGTGGTGGGCTATTTTTGTTAAGAGCAGGGAAGTCATCATTGTCAAGAAATTCTGTTACTCTTTGTCACTTTAGTAAATGATGTAAGGACTGACCATCACATGTTTATATCACAATATGGTCACTTTCATGAATCCTGAGTAAACAGTAATATTGATTCAGCTGAGAGTGGCCTAGATATTAAAATAATTGTTTCTAATTTTACACCTAAAATTGCTGTGGAATACCTTACATTATCATTCTGAAAATATCTTATTCCTTTTTAATCATAGGAAGCCAAACAAAGGGGTGATAGCATCACCGTTGAAACTTGCCCCCATTATCTCGCTTTTGCAGCTGAAGATATTCCTGATGGAGATACTCGGTTTAAGTGTGCTCCACCCATTCGTGATGCAGCCAATAAAGAAAAACTATGGGATGCGTTACTGGTATAGGCAACTTCCAAACTCCGTTACTGCTATAATCACATCCCATATTTCTTCTTTCAAAGAATTTACTTCATTTATTTGTATGCTTTTCAGGATGGAGATATTGACATGTTAAGTTCTGACCACTCGCCTTCTGTGCCAGAAATGAAACTCTTAGATGAGGGAGACTTCTTGAAAGCATGGGGTGGCATATCTTCCTTACAGGTCTTTACTTTTACTAGTTACATGTGATTACTATGTGGGCTCAGAAATAATGCAGATATAAGCCATTTGGAGATAATGGGATTATCTTGAAACTCATATATTATGGAAAAGCTTACATGCATATGGATGGATGGGACTACGTAAACTATGTCTCCAATGTATCAGTCAAACATTTTCCGTAGAACTCATGGTTGAAGCGAGATTTTTATTCCGAAACTTCTACTCTTTTAGTCCTCCAAAAATTCCTATTAGAACTACTATACCATCTTAGTTGCACTTTGTTTCTGAAGATTAGAGAAGTCATATAGGCTCTTTTTGTGTATCTAGAGTATAAAGATAACCTTTTAGCCACTGAATATGAGAATACATATTTATCAACATAAACTTTCTTAGCCCTATCAGCGACTTTCCTGTTATACTTGCAAATTGACCTACAGTAGATAGTTGAAAGTGTGTCATGCACCACAGTTGTAGCTCTGCTACTATTCCCAGGCATGTCAATATTGGTGTGGTTTCTCAGACAGACTTAAAGAATGAATTACAATTAACACAATGCTTGGTATAAGTATCAAAACATAATCATCATAATCTGTTTGATATACTATAAGGTGTTGTTACTTTTATGCAGTTTGTTCTACCCGTGACATGGACACATGGGCGTAAGTATGGAATAACATATGAGCAGTTGGCTTCTTGGTGGAGTGAGAAGCCTGCCAAACTTGCAGGTCTAACGACTAAGGTATCATGTTGAAGTATTTCAATATTACATCTACTGTTAGTAATTAAACAAGTTCAAATGTCATTTTGCTTTAAATTTTGAAAAAATTGATGTCAGATAAGTCTACTATAATTTGTTCTGGTTTATGATCCATACAAAGTTTTGTAACTGCTGCAGTTTTAGTCGCTGTAAATTTTTATGATACTTCCATATCTTGGTAGCTGGTATATGATTATAGTTCTTTTGCAGGGGGCAATTGCTGTGGGGAACCAAGCAGATATAGTTGTTTGGGAGCCAGACATGGAGTTCGACCTGGATAATGACTACCCTGTACATATTAAGCACCCTGTAAGTAAATTTACCTGTTAACTAGTAATTGTTATAGTAGTTTCTTATACCTGATTTGCGTGTGCAGAGATTTTGATTTTTTTCTTAGAAGGAATAACTACTAGGAAACATGTTTAAGGGTTCTATTCAAATAGATGAAGTTGTAATTTAGACAGAAGTATATCACCTACAACTTGAAATTCAGCTGTCAGATTATTTGCATGCTGCAGTTGTTACATTCCTTGCTTCTGGTTTTTGAAATTCAAATGTTGTTTATTGTTGTTCTTATTTGGCAGAGTATATCCGCATACATGGGATCAAGACTCTCTGGGAAAGTTTTGGCAACCTTTGTGGGCGGAAATCTGGTATACAAGGAGGGAAATCATGCTTCTCAAGCATGCGCTCTCCCAATTCTTCATAAATAGTTAGTGCTACGAGCCTATTGGTAAATCTACCGCTCACCATATCATCCATATTCATTCCCTTATGCAATGTTGATGTCCATTTCAAACTGCAGTCTTACTGTTCCATGTTTTGCATAGGTTGGAGACGACCACATGGCATGACATGTAGATGGAATTGATAACACTGTCATTCAGATCAAAACAAATCTTTGCATGGATCTAAGTTGTTCATCGTCTTAACTCTTCTTTTAGGCGTGCAACAGGGCTGGAGTGTATATAATCTGTTGTACGCCCTTAGTTGATAGTCATTCGATATTTAACTCTGTAGAAAATAAATATGTCACTTTAAGCTGAAAGCTCTTGTTGTTGATGAAGTACACATTAAGACTTGAATACATCTTCATAGTTACAAATTCCATGAGAAACTAATATCAACTTAATTTTGTCTTTCTAGCC</genome_strand>
        <mrna_strand>AAAAGAAAACAAACTTTTTGCAGTATAAAGTGGAAGCCATTAATGCACAAGAGATCATACACAAAGAAGGCTGAGGGTTAGCAGAGAAACATGGAATCTGGAAAGAAGAGTACTCTGGCTCTGCTACCACTCTTCCTTTCTTTCCTGTTTTACTTTGATTTCTCAAAAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCCTCAAGTGACTGCAGCCTTCTGCCTCATAATCACTATTGGATATCCAGCAAACGTATTGTGACTCCAAACGGGACAATTTCCGGTGCAG.......................................................................................................TTGAGATAAAGGAAGGAAGAATTATATCTGTTGTTGCTGAAGAGAATTGGCATGTAAATTCTCGGTTTACCACAGTGGTCAATTATAGGGAGTCTGTGGTCATGCCTGGATTTATTGATGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATGCCCATCTTGATGATCCTGGAAGATCAGAATGGGAAGGGTTTCCTTCAGGAACAAAAGCAGCTGCTGCAG...............................................................................................................................................................................................................................................GTGGAGTAACCACATTAGTTGACATGCCTCTTAATAGTGCTCCATCAACAGTTTCTGAAGAGACTTTAAAACTTAAG..............................................................................................................................................................................................................................................................................GTACAGGCTGCAGAAGGGAGGGTCTACGTGGATGTTG........................................................................GTTTCTGGGGAGGTTTGGTTCCAGAAAATGCAGAAAATACAAGTTCTCTGGAAAGACTTCTAAATGCAGGGGTTCTGGGATTGAAG...............................................................................................................................................................................................................................................................................................TCTTTTATGGTGCCATCAGGCATCAATGACTTTCCCATGACAACTGCATCCCACATAAAG......................................................................................................................................................................GAGGCACTCCCAACTCTGGCTCGATACAAAAGACCCCTACTTGTTCATGCCGAAGTGCTAGTAGATCTTGATGAAAAAGTGGAGCTGGAGGATGGGGTAGAGAATGCTAGATCATACTCTACATATCTCAAGACCAGGCCTGCTTCAAT....................................................................................................................................................................................................................................................................................................................GGAAGAGGCTGCTATCAATCAGCTCATAACACTGTCAAAGGACGCGAGGGCTGGTGGTTCTGCTGAAGGAGCTCATCTCCATATTGTTCATCTATCTGATGCTAGAACTTCACTAAACCTCATTAAG.......................................................................................................................................................................................................................................................................................................................................................................GAAGCCAAACAAAGGGGTGATAGCATCACCGTTGAAACTTGCCCCCATTATCTCGCTTTTGCAGCTGAAGATATTCCTGATGGAGATACTCGGTTTAAGTGTGCTCCACCCATTCGTGATGCAGCCAATAAAGAAAAACTATGGGATGCGTTACTG.............................................................................................GATGGAGATATTGACATGTTAAGTTCTGACCACTCGCCTTCTGTGCCAGAAATGAAACTCTTAGATGAGGGAGACTTCTTGAAAGCATGGGGTGGCATATCTTCCTTACAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTTCTACCCGTGACATGGACACATGGGCGTAAGTATGGAATAACATATGAGCAGTTGGCTTCTTGGTGGAGTGAGAAGCCTGCCAAACTTGCAGGTCTAACGACTAAG....................................................................................................................................................................................................................................GGGGCAATTGCTGTGGGGAACCAAGCAGATATAGTTGTTTGGGAGCCAGACATGGAGTTCGACCTGGATAATGACTACCCTGTACATATTAAGCACCCT...................................................................................................................................................................................................................................................................................AGTATATCCGCATACATGGGATCAAGACTCTCTGGGAAAGTTTTGGCAACCTTTGTGGGCGGAAATCTGGTATACAAGGAGGGAAATCATGCTTCTCAAGCATGCGCTCTCCCAATTCTTCATAAATAGTTAGTGCTACGAGCCTATTG.................................................................................................GTTGGAGACGACCACATGGCATGACATGTAGATGGAATTGATAACACTGTCATTCAGATCAAAACAAATCTTTGCATGGATCTAAGTTGTTCATCGTCTTAACTCTTCTTTTAGGCGTGCAACAGGGCTGGAGTGTATATAATCTGTTGTACGCCCTTAGTTGATAGTCATTCGATATTTAACTCTGTAGAAAATAAATATGTCACTTTAAGCTGAAAGCTCTTGTTGTTGATGAAGTACACATTAAGACTTGAATACATCTTCATAGTTACAAATTCCATGAGAAACTAATATCAACTTAATTTTGTCTTTCTAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563661" ref_strand="+" ref_description="SGN-U563661 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157329482|emb|CAO40456.1| (e_value=8e-98) unnamed; (*ATH) AT1G65070.1 (e_value=3e-82) | Symbol: None | DNA mismatch repair MutS family protein, contains Pfam profile PF00488: MutS domain V | chr1:24176795-24179907 REVERSE | Aliases: F16G16.7, F16G16_7; (*SWP) sp|P73625|MUTS2_SYNY3 (e_value=3e-13) MutS2 protein OS=Synechocystis sp. (strain PCC 6803) GN=mutSB; ">
      <seq>aatggacagcttactgtattgccgtgtaacccacccttccctccattttagagtaactggataacgcacccaaaagctcaacaaaaattcaaactttatcttcaatgaatcttttcaacttcaactgcaaatgcaaatccaacaatttcttcagcattcatcttcctccgcctcacagctcgctctgtaaccgtcgtacaactaggttctccgtccgtttctcatccgagtcaactcacagagtcaaactcgccgagtcactgcaatccgaaaccttgaagcttctagaatggcccgccgtgtgtcaacagctctccgctttcacgtccacatccatgggatacgccgcagcacaatctgctcggattccggtgggtaaaactcgtgaagagagcagtagacttctctctcagacctcggccgcggtggctgtacctcggccgttggattttaccggaattgaagatatttccccaattgttgatgcttccgttgcaggcggtgtactctcgattcgtgaactttgctctgtgaaacgaaccttggcagcggcgagatttttgctccaacagttggaggagattgatttttctgaaagttaactcaaaatggcgaagcatgtctcatgtggtagtgatggattctcatgaagttccatttaaatagtattgagcagtttcattagaatgtctaattatcttcaaacaggtactcttctctgaaggaaattcttcacagttgtgattttcttgtggaattggagcaaaaaatagaattctgtattgattgcagcttttcagtaatccttgatagagctagtgaagatttggaaattataagatccgagagaaagaggaacatggataatctagaattattgttgaagcaattatcaactcaagtttttcaaggtggaggatttgacaggcctttagtgaccaagcgccgttcaagattgtgtgttgctgtgagagcttcacatagatctttgcttcctaattccgtaatcctagatacaagcagtagtggatctacatacttcatggaacctaaagaggcagttgagctaaacaacatggaagttaaactttctagttctgagaaggttgaggagcaaacaattttgagtttgcttacatctgaaatagcagaatctaatatgaaaataaagcacttattagataaaatattggaaatcgatcttgcatttgcaagggctgctcatgctcagtggatgggtgctgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="+" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="32947" stop="35457"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33247" g_stop="33844" g_length="598"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="598" r_length="598" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33845" i_stop="34509" i_length="665">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="34510" g_stop="35157" g_length="648"/>
          <reference_exon_boundary r_type="cDNA" r_start="599" r_stop="1246" r_length="648" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="+" ref_id="SGN-U563661" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1246</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U563661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33247" e_stop="33844"/>
          <exon e_start="34510" e_stop="35157"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGGACAGCTTACTGTATTGCCGTGTAACCCACCCTTCCCTCCATTTTAGAGTAACTGGATAACGCACCCAAAAGCTCAACAAAAATTCAAACTTTATCTTCAATGAATCTTTTCAACTTCAACTGCAAATGCAAATCCAACAATTTCTTCAGCATTCATCTTCCTCCGCCTCACAGCTCGCTCTGTAACCGTCGTACAACTAGGTTCTCCGTCCGTTTCTCATCCGAGTCAACTCACAGAGTCAAACTCGCCGAGTCACTGCAATCCGAAACCTTGAAGCTTCTAGAATGGCCCGCCGTGTGTCAACAGCTCTCCGCTTTCACGTCCACATCCATGGGATACGCCGCAGCACAATCTGCTCGGATTCCGGTGGGTAAAACTCGTGAAGAGAGCAGTAGACTTCTCTCTCAGACCTCGGCCGCGGTGGCTGTACCTCGGCCGTTGGATTTTACCGGAATTGAAGATATTTCCCCAATTGTTGATGCTTCCGTTGCAGGCGGTGTACTCTCGATTCGTGAACTTTGCTCTGTGAAACGAACCTTGGCAGCGGCGAGATTTTTGCTCCAACAGTTGGAGGAGATTGATTTTTCTGAAAGGTATATTGTTGTATTTAGTACTCTACTTAAAGCATTGCATTATTTTGTTTGTTGTTCTACGTTGTAGTTGCTTGGTGTTGGATTCTTATGGTATAAAGAACCTCTGATTGTAGATGATAGGGTGATCCGTGAGATTCAAGCAACTTGCAATTTAAAATCTGGGATCAGCTAGTCCATAGGATGATGATTCGAAAGCAAAATTTGTCTCTACAGCCATGCCTTAAGCTTGCTAATTTATCTTTAAGAACGTTTTTTGCTTAGCTCAAAAGTCTTAAGATAACAGTTAGTAAATTTTGTTTTTTACTGATTGCAAAATCATGGTAGAATTGACAATAGTTCTAGATTTTTGGTCAAAAGAACTGCCGCATAGCTGAAGTTTCTATCCAAAAATGTATCAAAGAGGTTGGTGGCTGTCCATCTGGGAATTAACTTGATGAAAAAGTAAGAGGTGAAATATAGTTCATCTGATGAATATCGGAGTGAGCACTCTTCCAAGATATTTGTAGGAAGTGGTAAATATGGTCTCATTCCTTTCTCGAATTTACACAATGCTGTGGTGCTTTTTGAAAGATTAAGAATGCAGGCTTTAAAGATGAATTCACCTTGAGTGTGTTTTCCCTTTATTTGCTGTTCCTCTGAGAATGCCTTCCTACTCCCAATTGCAGTTAACTCAAAATGGCGAAGCATGTCTCATGTGGTAGTGATGGATTCTCATGAAGTTCCATTTAAATAGTATTGAGCAGTTTCATTAGAATGTCTAATTATCTTCAAACAGGTACTCTTCTCTGAAGGAAATTCTTCACAGTTGTGATTTTCTTGTGGAATTGGAGCAAAAAATAGAATTCTGTATTGATTGCAGCTTTTCAGTAATCCTTGATAGAGCTAGTGAAGATTTGGAAATTATAAGATCCGAGAGAAAGAGGAACATGGATAATCTAGAATTATTGTTGAAGCAATTATCAACTCAAGTTTTTCAAGGTGGAGGATTTGACAGGCCTTTAGTGACCAAGCGCCGTTCAAGATTGTGTGTTGCTGTGAGAGCTTCACATAGATCTTTGCTTCCTAATTCCGTAATCCTAGATACAAGCAGTAGTGGATCTACATACTTCATGGAACCTAAAGAGGCAGTTGAGCTAAACAACATGGAAGTTAAACTTTCTAGTTCTGAGAAGGTTGAGGAGCAAACAATTTTGAGTTTGCTTACATCTGAAATAGCAGAATCTAATATGAAAATAAAGCACTTATTAGATAAAATATTGGAAATCGATCTTGCATTTGCAAGGGCTGCTCATGCTCAGTGGATGGGTGCTGCC</genome_strand>
        <mrna_strand>AATGGACAGCTTACTGTATTGCCGTGTAACCCACCCTTCCCTCCATTTTAGAGTAACTGGATAACGCACCCAAAAGCTCAACAAAAATTCAAACTTTATCTTCAATGAATCTTTTCAACTTCAACTGCAAATGCAAATCCAACAATTTCTTCAGCATTCATCTTCCTCCGCCTCACAGCTCGCTCTGTAACCGTCGTACAACTAGGTTCTCCGTCCGTTTCTCATCCGAGTCAACTCACAGAGTCAAACTCGCCGAGTCACTGCAATCCGAAACCTTGAAGCTTCTAGAATGGCCCGCCGTGTGTCAACAGCTCTCCGCTTTCACGTCCACATCCATGGGATACGCCGCAGCACAATCTGCTCGGATTCCGGTGGGTAAAACTCGTGAAGAGAGCAGTAGACTTCTCTCTCAGACCTCGGCCGCGGTGGCTGTACCTCGGCCGTTGGATTTTACCGGAATTGAAGATATTTCCCCAATTGTTGATGCTTCCGTTGCAGGCGGTGTACTCTCGATTCGTGAACTTTGCTCTGTGAAACGAACCTTGGCAGCGGCGAGATTTTTGCTCCAACAGTTGGAGGAGATTGATTTTTCTGAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACTCAAAATGGCGAAGCATGTCTCATGTGGTAGTGATGGATTCTCATGAAGTTCCATTTAAATAGTATTGAGCAGTTTCATTAGAATGTCTAATTATCTTCAAACAGGTACTCTTCTCTGAAGGAAATTCTTCACAGTTGTGATTTTCTTGTGGAATTGGAGCAAAAAATAGAATTCTGTATTGATTGCAGCTTTTCAGTAATCCTTGATAGAGCTAGTGAAGATTTGGAAATTATAAGATCCGAGAGAAAGAGGAACATGGATAATCTAGAATTATTGTTGAAGCAATTATCAACTCAAGTTTTTCAAGGTGGAGGATTTGACAGGCCTTTAGTGACCAAGCGCCGTTCAAGATTGTGTGTTGCTGTGAGAGCTTCACATAGATCTTTGCTTCCTAATTCCGTAATCCTAGATACAAGCAGTAGTGGATCTACATACTTCATGGAACCTAAAGAGGCAGTTGAGCTAAACAACATGGAAGTTAAACTTTCTAGTTCTGAGAAGGTTGAGGAGCAAACAATTTTGAGTTTGCTTACATCTGAAATAGCAGAATCTAATATGAAAATAAAGCACTTATTAGATAAAATATTGGAAATCGATCTTGCATTTGCAAGGGCTGCTCATGCTCAGTGGATGGGTGCTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563253" ref_strand="+" ref_description="SGN-U563253 Tomato 200607#2 [18 ESTs aligned] (*GB) gi|76160988|gb|ABA40457.1| (e_value=1e-128) TSJT1-like protein [Solanum tuberosum]; (*ATH) AT4G27450.1 (e_value=3e-56) | Symbol: None | expressed protein, similar to auxin down-regulated protein ARG10 (Vigna radiata) GI:2970051, wali7 (aluminum-induced protein) (Triticum aestivum) GI:451193 | chr4:13727493-13728892 REVERSE | Aliases: F27G19.50, F27G19_50; (*SWP) sp|P24805|TSJT1_TOBAC (e_value=2e-63) Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1; ">
      <seq>tcagccttcagtatttagacaaaactttcttggcttctttcttctatacaataaaaaaaataatattcctaatttaaaacaagtatgtttgattttctggattttcaaaaccatgttccaagaaaaagataattttatttatacaaaattttcataacgtaaaatatttaactactaataagtgccatttgaacaatggatagatgtgacagatgtactgtcaacattattgatgccacgtcagtactttattttcggttacaacagtcatttggataagcatctcaagagtttgtacatttcgtagtttgacttgatacgaaattttatttattttttattttttttgaaatttgtaatttatataaatagtcataatattgttgttgctgctgggaattttatggttaatgaaaaaagtttctagcttttatttgagtagtaaacatgttggctgtgtttgagcaatctattgggaagccaccttcagagctgagcgttgctcagacagatagacagaaaaaggaggctaaaacaaaggaagagattgaagaaagtttcaaatcatggaagccagactcaactttttaccacctttcaaatgggaatttcatggctttttctcatggaaatgaaaaccctttccatccaaggtctattgtggtgatggatgacatattctgcatcttttctggtggtttagacaacacttttgatttgaggaaatattatggtctttcaagacaagctacagaagctatgataatggttgaggcttacaaagttttaagggatcgggcgccataccctcctgatcaagtcatcaaagaacttgaaggcaaatttgctttcattctctttgactataaagcctccactctttttcttgctagggatcgcgatggaagtgtgccgttacactggggaactgctacagatggatcattagtatgttctgatgattcagagttcattcaagcttcttgtgggaaattgtataccccgtttcctccaggttgtatcttcataagtgacactgggctaataagctttgatcatccaatgcacaaagtaaaaggaattgcgcgtgaagatgatgaaggaaatgtcaatgctgtgattttccaggtggacttgtacaccaaactccacagcattccgcgcaggggaagtgctgcgaattgggctggtgctactacggttgaatgaaacggaagatttgaaactttgacgatcttcccaagttgagtcattattgtaataatgttaaatcacaaacggtatgctactttgtggcaatcttgttaaataatctgaaatcatatgttgctgcaataataatatttccatcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="+" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="38503" stop="40902"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38803" g_stop="39455" g_length="653"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="653" r_length="653" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="39456" i_stop="39659" i_length="204">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39660" g_stop="39900" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="894" r_length="241" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="39901" i_stop="40057" i_length="157">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="40058" g_stop="40178" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="895" r_stop="1015" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="40179" i_stop="40263" i_length="85">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.061" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="40264" g_stop="40602" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="1016" r_stop="1354" r_length="339" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="+" ref_id="SGN-U563253" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1354</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U563253" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38803" e_stop="39455"/>
          <exon e_start="39660" e_stop="39900"/>
          <exon e_start="40058" e_stop="40178"/>
          <exon e_start="40264" e_stop="40602"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGCCTTCAGTATTTAGACAAAACTTTCTTGGCTTCTTTCTTCTATACAATAAAAAAAATAATATTCCTAATTTAAAACAAGTATGTTTGATTTTCTGGATTTTCAAAACCATGTTCCAAGAAAAAGATAATTTTATTTATACAAAATTTTCATAACGTAAAATATTTAACTACTAATAAGTGCCATTTGAACAATGGATAGATGTGACAGATGTACTGTCAACATTATTGATGCCACGTCAGTACTTTATTTTCGGTTACAACAGTCATTTGGATAAGCATCTCAAGAGTTTGTACATTTCGTAGTTTGACTTGATACGAAATTTTATTTATTTTTTATTTTTTTTGAAATTTGTAATTTATATAAATAGTCATAATATTGTTGTTGCTGCTGGGAATTTTATGGTTAATGAAAAAAGTTTCTAGCTTTTATTTGAGTAGTAAACATGTTGGCTGTGTTTGAGCAATCTATTGGGAAGCCACCTTCAGAGCTGAGCGTTGCTCAGACAGATAGACAGAAAAAGGAGGCTAAAACAAAGGAAGAGATTGAAGAAAGTTTCAAATCATGGAAGCCAGACTCAACTTTTTACCACCTTTCAAATGGGAATTTCATGGCTTTTTCTCATGGAAATGAAAACCCTTTCCATCCAAGGTATTAAAGTTTTGTTCTGAAACTAATTTGTTTCTTTTATAAAATGATAATGTGTTTTTTCTTGTTTGTGCTTGGATTTGTGTTGTTGTACATTGATGATGAGTGTATACATAAAGGGGGGATTTTTGTTATATTTCAAGACTAGAGGCAATAAACAAGGTGACTGACTAAAGGAGCTTGTTTTGTTTTGTGTAACATATATAGGTCTATTGTGGTGATGGATGACATATTCTGCATCTTTTCTGGTGGTTTAGACAACACTTTTGATTTGAGGAAATATTATGGTCTTTCAAGACAAGCTACAGAAGCTATGATAATGGTTGAGGCTTACAAAGTTTTAAGGGATCGGGCGCCATACCCTCCTGATCAAGTCATCAAAGAACTTGAAGGCAAATTTGCTTTCATTCTCTTTGACTATAAAGCCTCCACTCTTTTTCTTGCTAGGGTGAGTGATAAAGTTACTTATAGACGATTCTCTAACGTACTATCACACGTTAAACTATATTGATAGTGGAAAAGAATCTGAATGTTATGATCAGTATATGTAACATAACTAGCTCCTTTATCAGAATAAACTTGATGTATCTCCAAACAATGTATAGGATCGCGATGGAAGTGTGCCGTTACACTGGGGAACTGCTACAGATGGATCATTAGTATGTTCTGATGATTCAGAGTTCATTCAAGCTTCTTGTGGGAAATTGTATACCCCGTTTCCTCCAGGTTTCTTAATCAAATCCTCTTTTAAGTTTAATCTGATGTTTTTGGAGATCCAGCGGAATTCAATGTGTTAAAGCTGATTGTACAGGTTGTATCTTCATAAGTGACACTGGGCTAATAAGCTTTGATCATCCAATGCACAAAGTAAAAGGAATTGCGCGTGAAGATGATGAAGGAAATGTCAATGCTGTGATTTTCCAGGTGGACTTGTACACCAAACTCCACAGCATTCCGCGCAGGGGAAGTGCTGCGAATTGGGCTGGTGCTACTACGGTTGAATGAAACGGAAGATTTGAAACTTTGACGATCTTCCCAAGTTGAGTCATTATTGTAATAATGTTAAATCACAAACGGTATGCTACTTTGTGGCAATCTTGTTAAATAATCTGAAATCATATGTTGCTGCAATAATAATATTTCCATCATC</genome_strand>
        <mrna_strand>TCAGCCTTCAGTATTTAGACAAAACTTTCTTGGCTTCTTTCTTCTATACAATAAAAAAAATAATATTCCTAATTTAAAACAAGTATGTTTGATTTTCTGGATTTTCAAAACCATGTTCCAAGAAAAAGATAATTTTATTTATACAAAATTTTCATAACGTAAAATATTTAACTACTAATAAGTGCCATTTGAACAATGGATAGATGTGACAGATGTACTGTCAACATTATTGATGCCACGTCAGTACTTTATTTTCGGTTACAACAGTCATTTGGATAAGCATCTCAAGAGTTTGTACATTTCGTAGTTTGACTTGATACGAAATTTTATTTATTTTTTATTTTTTTTGAAATTTGTAATTTATATAAATAGTCATAATATTGTTGTTGCTGCTGGGAATTTTATGGTTAATGAAAAAAGTTTCTAGCTTTTATTTGAGTAGTAAACATGTTGGCTGTGTTTGAGCAATCTATTGGGAAGCCACCTTCAGAGCTGAGCGTTGCTCAGACAGATAGACAGAAAAAGGAGGCTAAAACAAAGGAAGAGATTGAAGAAAGTTTCAAATCATGGAAGCCAGACTCAACTTTTTACCACCTTTCAAATGGGAATTTCATGGCTTTTTCTCATGGAAATGAAAACCCTTTCCATCCAAG............................................................................................................................................................................................................GTCTATTGTGGTGATGGATGACATATTCTGCATCTTTTCTGGTGGTTTAGACAACACTTTTGATTTGAGGAAATATTATGGTCTTTCAAGACAAGCTACAGAAGCTATGATAATGGTTGAGGCTTACAAAGTTTTAAGGGATCGGGCGCCATACCCTCCTGATCAAGTCATCAAAGAACTTGAAGGCAAATTTGCTTTCATTCTCTTTGACTATAAAGCCTCCACTCTTTTTCTTGCTAGG.............................................................................................................................................................GATCGCGATGGAAGTGTGCCGTTACACTGGGGAACTGCTACAGATGGATCATTAGTATGTTCTGATGATTCAGAGTTCATTCAAGCTTCTTGTGGGAAATTGTATACCCCGTTTCCTCCAG.....................................................................................GTTGTATCTTCATAAGTGACACTGGGCTAATAAGCTTTGATCATCCAATGCACAAAGTAAAAGGAATTGCGCGTGAAGATGATGAAGGAAATGTCAATGCTGTGATTTTCCAGGTGGACTTGTACACCAAACTCCACAGCATTCCGCGCAGGGGAAGTGCTGCGAATTGGGCTGGTGCTACTACGGTTGAATGAAACGGAAGATTTGAAACTTTGACGATCTTCCCAAGTTGAGTCATTATTGTAATAATGTTAAATCACAAACGGTATGCTACTTTGTGGCAATCTTGTTAAATAATCTGAAATCATATGTTGCTGCAATAATAATATTTCCATCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563254" ref_strand="+" ref_description="SGN-U563254 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|78191428|gb|ABB29935.1| (e_value=3e-76) TSJT1-like protein [Solanum tuberosum]; (*ATH) AT5G43830.1 (e_value=8e-26) | Symbol: None | expressed protein, similar to auxin down-regulated protein ARG10 (Vigna radiata) GI:2970051, wali7 (aluminum-induced protein) (Triticum aestivum) GI:451193 | chr5:17639563-17641545 REVERSE | Aliases: MQD19.19, MQD19_19; (*SWP) sp|P24805|TSJT1_TOBAC (e_value=2e-21) Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1; ">
      <seq>gtctttcaagacaagctacagaagctatgataatggttgaggcttacaaagttttaagggatcgggcgccataccctcctgatcaagtcatcaaagaacttgaaggcaaatttgctttcattctctttgactataaagcctccactctttttcttgctagggatcgcgatggaagtgtgccgttacactggggaactgctacagatggatcattagtatgttctgatgattcagagttcattcaagcttcttgtgggaaattgtataccccgtttcctccaggtttcttaatcaaatcctcttttaagtttaatctgatgtttttggagatccagcggaattcaatgtgttaaagctgattgtacaggttgtatcttcataagtgacactgggctaataagctttgatcatccaatgcacaaagtaaaaggaattgcgcgtgaagatgatgaaggaaatgtcaatgctgtgattttccaggtggacttgtacaccaaactccacagcattccgcgcaggggaagtgctgcgaattgggctggtgctactacggttgaatgaaacggaagatttgaaactttgacgatcttcccaagttgagtcattattgtaataatgttaaatcacaaacggtatgctactttgtggcaatcttgttaaataatctgaaatcatatgttgctgcaataataatatttccatcatcaatcgactgtttctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="+" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="39440" stop="40918"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39740" g_stop="39900" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="161" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="39901" i_stop="40057" i_length="157">
            <donor d_prob="0.954" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="40058" g_stop="40618" g_length="561"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="722" r_length="561" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="+" ref_id="SGN-U563254" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U563254" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39740" e_stop="39900"/>
          <exon e_start="40058" e_stop="40618"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCTTTCAAGACAAGCTACAGAAGCTATGATAATGGTTGAGGCTTACAAAGTTTTAAGGGATCGGGCGCCATACCCTCCTGATCAAGTCATCAAAGAACTTGAAGGCAAATTTGCTTTCATTCTCTTTGACTATAAAGCCTCCACTCTTTTTCTTGCTAGGGTGAGTGATAAAGTTACTTATAGACGATTCTCTAACGTACTATCACACGTTAAACTATATTGATAGTGGAAAAGAATCTGAATGTTATGATCAGTATATGTAACATAACTAGCTCCTTTATCAGAATAAACTTGATGTATCTCCAAACAATGTATAGGATCGCGATGGAAGTGTGCCGTTACACTGGGGAACTGCTACAGATGGATCATTAGTATGTTCTGATGATTCAGAGTTCATTCAAGCTTCTTGTGGGAAATTGTATACCCCGTTTCCTCCAGGTTTCTTAATCAAATCCTCTTTTAAGTTTAATCTGATGTTTTTGGAGATCCAGCGGAATTCAATGTGTTAAAGCTGATTGTACAGGTTGTATCTTCATAAGTGACACTGGGCTAATAAGCTTTGATCATCCAATGCACAAAGTAAAAGGAATTGCGCGTGAAGATGATGAAGGAAATGTCAATGCTGTGATTTTCCAGGTGGACTTGTACACCAAACTCCACAGCATTCCGCGCAGGGGAAGTGCTGCGAATTGGGCTGGTGCTACTACGGTTGAATGAAACGGAAGATTTGAAACTTTGACGATCTTCCCAAGTTGAGTCATTATTGTAATAATGTTAAATCACAAACGGTATGCTACTTTGTGGCAATCTTGTTAAATAATCTGAAATCATATGTTGCTGCAATAATAATATTTCCATCATCAATCGACTGTTTCTTA</genome_strand>
        <mrna_strand>GTCTTTCAAGACAAGCTACAGAAGCTATGATAATGGTTGAGGCTTACAAAGTTTTAAGGGATCGGGCGCCATACCCTCCTGATCAAGTCATCAAAGAACTTGAAGGCAAATTTGCTTTCATTCTCTTTGACTATAAAGCCTCCACTCTTTTTCTTGCTAGG.............................................................................................................................................................GATCGCGATGGAAGTGTGCCGTTACACTGGGGAACTGCTACAGATGGATCATTAGTATGTTCTGATGATTCAGAGTTCATTCAAGCTTCTTGTGGGAAATTGTATACCCCGTTTCCTCCAGGTTTCTTAATCAAATCCTCTTTTAAGTTTAATCTGATGTTTTTGGAGATCCAGCGGAATTCAATGTGTTAAAGCTGATTGTACAGGTTGTATCTTCATAAGTGACACTGGGCTAATAAGCTTTGATCATCCAATGCACAAAGTAAAAGGAATTGCGCGTGAAGATGATGAAGGAAATGTCAATGCTGTGATTTTCCAGGTGGACTTGTACACCAAACTCCACAGCATTCCGCGCAGGGGAAGTGCTGCGAATTGGGCTGGTGCTACTACGGTTGAATGAAACGGAAGATTTGAAACTTTGACGATCTTCCCAAGTTGAGTCATTATTGTAATAATGTTAAATCACAAACGGTATGCTACTTTGTGGCAATCTTGTTAAATAATCTGAAATCATATGTTGCTGCAATAATAATATTTCCATCATCAATCGACTGTTTCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563015" ref_strand="+" ref_description="SGN-U563015 Tomato 200607#2 [13 ESTs aligned] (*GB) gi|135258|sp|P24804|TA29_TOBAC (e_value=5e-49) ANTHER-SPECIFIC PROTEIN TA-29; (*SWP) sp|P24804|TA29_TOBAC (e_value=3e-50) Anther-specific protein TA-29 OS=Nicotiana tabacum GN=TA-29; ">
      <seq>gaataatcaaatcaaagtctttttcttaaataaacttagctaaaatggcagctccaacatgtttgaacatttgttttatggttttgctaagcttagcaatatgctctgcccagcctattgaagttgatcatcatcacaaccacaaagctcacgctttgagtaatatcggaggaggcagtgatggcggattaggcattggtggtggtggaggtggatttggcattggctttggtgttggtgttggcgttggtggtggaagatttgggtttggcattggtggaggtgtccctggttatatacctggctttgatttcccagtctattcccctgattgtggttatgtgtgtcttgttaataatcctagtggagaagtcacagaattcaaaatctcaggattatcacacttcaccaaaccatacagatgcaaaccaggaccaaacatgcgcggagacaaagattttaaccatgaacttcttctaaactttgtttctacaatgctggacaaacaacaacatctacacagtggagatgtaggtcaccatgtagggggagctagacgtttaggatttggtcgtggaagtagcagaggaacaggtggttctgatacctctgatcagtatgctactgaggaccccggttggagtattgagggatgtggttatgtatgtccaggcaacagtcctagtggaggactcactgaattccatatctcaggaatatcacatttcagtgaaccttacagatgtagcccagatgtatgtgacactgaagaatgtggtgagtttcttctacgctttgtttctccaatgcataacaaacacgagaaccaacatggtcatcagtcagagcagcaagacaagcatgagaacaaacacggtcatcagttagaccagcacgacacacatgagaaccaacatggtcatcaatcagagaagcaagaggaagatatcacaaacaatatccccgacccacccacaccccaatcctgaatccaagaaaaagaaacttaatatgtaataatgttatgtagcttcagccaaaaaacagtatatactgtctaagaagctaactatttacaaggaacttaataaaacttgttttagttgaacttccccttgttgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="-" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="42520" stop="40812"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42221" g_stop="41115" g_length="1107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1107" r_length="1107" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="-" ref_id="SGN-U563015" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1107</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U563015" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42221" e_stop="41115"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATAATCAAATCAAAGTCTTTTTCTTAAATAAACTTAGCTAAAATGGCAGCTCCAACATGTTTGAACATTTGTTTTATGGTTTTGCTAAGCTTAGCAATATGCTCTGCCCAGCCTATTGAAGTTGATCATCATCACAACCACAAAGCTCACGCTTTGAGTAATATCGGAGGAGGCAGTGATGGCGGATTAGGCATTGGTGGTGGTGGAGGTGGATTTGGCATTGGCTTTGGTGTTGGTGTTGGCGTTGGTGGTGGAAGATTTGGGTTTGGCATTGGTGGAGGTGTCCCTGGTTATATACCTGGCTTTGATTTCCCAGTCTATTCCCCTGATTGTGGTTATGTGTGTCTTGTTAATAATCCTAGTGGAGAAGTCACAGAATTCAAAATCTCAGGATTATCACACTTCACCAAACCATACAGATGCAAACCAGGACCAAACATGCGCGGAGACAAAGATTTTAACCATGAACTTCTTCTAAACTTTGTTTCTACAATGCTGGACAAACAACAACATCTACACAGTGGAGATGTAGGTCACCATGTAGGGGGAGCTAGACGTTTAGGATTTGGTCGTGGAAGTAGCAGAGGAACAGGTGGTTCTGATACCTCTGATCAGTATGCTACTGAGGACCCCGGTTGGAGTATTGAGGGATGTGGTTATGTATGTCCAGGCAACAGTCCTAGTGGAGGACTCACTGAATTCCATATCTCAGGAATATCACATTTCAGTGAACCTTACAGATGTAGCCCAGATGTATGTGACACTGAAGAATGTGGTGAGTTTCTTCTACGCTTTGTTTCTCCAATGCATAACAAACACGAGAACCAACATGGTCATCAGTCAGAGCAGCAAGACAAGCATGAGAACAAACACGGTCATCAGTTAGACCAGCACGACACACATGAGAACCAACATGGTCATCAATCAGAGAAGCAAGAGGAAGATATCACAAACAATATCCCCGACCCACCCACACCCCAATCCTGAATCCAAGAAAAAGAAACTTAATATGTAATAATGTTATGTAGCTTCAGCCAAAAAACAGTATATACTGTCTAAGAAGCTAACTATTTACAAGGAACTTAATAAAACTTGTTTTAGTTGA</genome_strand>
        <mrna_strand>GAATAATCAAATCAAAGTCTTTTTCTTAAATAAACTTAGCTAAAATGGCAGCTCCAACATGTTTGAACATTTGTTTTATGGTTTTGCTAAGCTTAGCAATATGCTCTGCCCAGCCTATTGAAGTTGATCATCATCACAACCACAAAGCTCACGCTTTGAGTAATATCGGAGGAGGCAGTGATGGCGGATTAGGCATTGGTGGTGGTGGAGGTGGATTTGGCATTGGCTTTGGTGTTGGTGTTGGCGTTGGTGGTGGAAGATTTGGGTTTGGCATTGGTGGAGGTGTCCCTGGTTATATACCTGGCTTTGATTTCCCAGTCTATTCCCCTGATTGTGGTTATGTGTGTCTTGTTAATAATCCTAGTGGAGAAGTCACAGAATTCAAAATCTCAGGATTATCACACTTCACCAAACCATACAGATGCAAACCAGGACCAAACATGCGCGGAGACAAAGATTTTAACCATGAACTTCTTCTAAACTTTGTTTCTACAATGCTGGACAAACAACAACATCTACACAGTGGAGATGTAGGTCACCATGTAGGGGGAGCTAGACGTTTAGGATTTGGTCGTGGAAGTAGCAGAGGAACAGGTGGTTCTGATACCTCTGATCAGTATGCTACTGAGGACCCCGGTTGGAGTATTGAGGGATGTGGTTATGTATGTCCAGGCAACAGTCCTAGTGGAGGACTCACTGAATTCCATATCTCAGGAATATCACATTTCAGTGAACCTTACAGATGTAGCCCAGATGTATGTGACACTGAAGAATGTGGTGAGTTTCTTCTACGCTTTGTTTCTCCAATGCATAACAAACACGAGAACCAACATGGTCATCAGTCAGAGCAGCAAGACAAGCATGAGAACAAACACGGTCATCAGTTAGACCAGCACGACACACATGAGAACCAACATGGTCATCAATCAGAGAAGCAAGAGGAAGATATCACAAACAATATCCCCGACCCACCCACACCCCAATCCTGAATCCAAGAAAAAGAAACTTAATATGTAATAATGTTATGTAGCTTCAGCCAAAAAACAGTATATACTGTCTAAGAAGCTAACTATTTACAAGGAACTTAATAAAACTTGTTTTAGTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575611" ref_strand="+" ref_description="SGN-U575611 Tomato 200607#2 [14 ESTs aligned] (*GB) gi|217072240|gb|ACJ84480.1| (e_value=4e-105) unknown; (*ATH) AT4G04950.1 (e_value=7e-96) | Symbol: None | thioredoxin family protein, similar to PKCq-interacting protein PICOT from (Mus musculus) GI:6840949, (Rattus norvegicus) GI:6840951; contains Pfam profile PF00085: Thioredoxin | chr4:2517664-2519947 REVERSE | Aliases: T1J1.6, T1J1_6; (*SWP) sp|Q9ZPH2|GRS17_ARATH (e_value=7e-95) Monothiol glutaredoxin-S17 OS=Arabidopsis thaliana GN=GRXS17; ">
      <seq>gggcttttatataaaacagcataaaagaggagaaatttcgtattgttctttgagggtatttacttcacttctcattgagaaatagagaatctgaaagaatcgagaatgggcggaggaggatcagtgaaggaagttcaatcgaaggcggagcttgataagattgtcgccgacggatcaccggcgattttgcacttttgggcatcatggtgtgaagcttctaagcacatggaccaagtcttttcgcatctttctactgatttcccacatgcccattttctaagagttgaagctgaagaacagcctgagatatctgagctgcactctgtttctgctgtaccttactttgtcttcttcaaggaagggaaagctgttgatacattggaaggggccgatccatctagtttggctaacaaggttgcaaaaattgctgggtcaatcactcctggggatcctgccgctcctgctagcctaggaatggctgcaggtccctctgttcttgaagcaattcaggagttgtctagagaaaacggtgcccctcaagtgtcaagttctggtcttgatgatcggctaacaaagcgacttcagcagctggtttcttctcatccagtattgcttttcatgaaagggaccccagaagaacccaagtgtggttttagtcagaaagtcgttgatatcttgaagaaagagaaggtcaaatttggaagttttgatattctgatggacagtgaggtccgtgagggtctgaagaaattttccaattggccaacatatcctcaactgtactgcaagggtgaacttcttgggtggttgtgatattgttataactatgcatgagagtggtgaactttccgatgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="+" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="45143" stop="50326"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45442" g_stop="45723" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="282" r_length="282" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45724" i_stop="47895" i_length="2172">
            <donor d_prob="0.833" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47896" g_stop="47970" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="357" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47971" i_stop="49527" i_length="1557">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49528" g_stop="50026" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="857" r_length="500" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="+" ref_id="SGN-U575611" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>856</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U575611" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45442" e_stop="45723"/>
          <exon e_start="47896" e_stop="47970"/>
          <exon e_start="49528" e_stop="50026"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCTTTTATATAAAACAGCATAAAAGAGGAGAAATTTCGTATTGTTCTTTGAGGGTATTTACTTCACTTCTCATTGAGAAATAGAGAATCTGAAAGAATCGAGAATGGGCGGAGGAGGATCAGTGAAGGAAGTTCAATCGAAGGCGGAGCTTGATAAGATTGTCGCCGACGGATCACCGGCGATTTTGCACTTTTGGGCATCATGGTGTGAAGCTTCTAAGCACATGGACCAAGTCTTTTCGCATCTTTCTACTGATTTCCCACATGCCCATTTTCTAAGAGTAAGCAAAATCTTCTCACTTTGTGCATATATGGAAGAGAAGCCCAAAAAGATTGTATCTTTTTTAATTTATCGATCGATTTCTGGTTTTATTTTTGGTTATATGACTGGCGCTGTTATATTTCTTACTGAGAAAGGTAAAATAAGATAGGTTATGGAATTTTGAATGATCTTGAAATATATTGATGCGTTATTGATTGATTTTCTGCTTGATATGTTCTTGTTGGGGGTTGTTTAGTTTTTGTTCCCCTTTAACTAAGGTGTGAAGGGTTAAGAGTTTTTGTACACTTCTTTTGTGAAACTTTATTGGAGATGGACCAAGTTTATATCTTTTTAATTTATTGGTTGAGTTCTGGTATTTTATTGAATGGTTTTTGATGTGGCTTATGGAATTTTGAATGAATTGTTGGATTGCTATTTTCTGTTTGATATGCTCTTTTGTTTGGAGGGGGTTCTCTGGGTTTGTTTTTTATTGCTGTGCTTTGAGGGTTTAGGGTTTTGTTGTTCATTATTCAGTTTTCACATGTAATAAAACTCAGAAAGTATATATATTTTAATTCTTTATATCGATATCAATACAGTCCAGTGGTTTAGGCATAGGAGTGACAACTTGGAGATTATTGGTTTGAATTTGGGTTATAACACCAGGGTGTTTAGCCTTGGTGAGCAGGTTTACCATTGGTAGATTAGTCAAATGTGTGCAAGCCAGTACCTGGTACCACCTTCATTAGTAAAAATGGCAGTTCATAAGATTTTGGACGAACTACAAAGCTTTGTGATGTGCTATTGAAAGATATGCTTTAAAGGGTTTTGGACATATTGTTTCTGTTTGGAGTGTTTTTTTTTAATGTTTGTTTTGGGAAGATATGCTTTAAATGGTTTATGGTTCTGTAGTGAATGTAGATCATTCTTGTAGTGACAATGAGATTTCTCCTTTTGCACAGTAAGTCTTGGTTTGTAGTAAACAATTGTTTTGATAAGATATATAATTTTATTAATTCGGGAAAGCACTTGTGTACGAGCAGTATGCCAAGATATAGATAATCTATACCAAAATATGGTTCTCCATTAATGACACTCAATCTTCTATACAATAGGCTAACTTTGGTGAAATTTTAGGGTGCTACTGTTAAGAGTTTTTTGGTCAAACTTGGTACTAATAGAAATAAGCTTTGCTCTATTAGGCAACTATTATTACCTCTTATAAGCTCATTGTCACATTCTTTGGTAGATGTTGAAGAAATAAAAGCAGTTTGAGGAAATGAACATGCATTATTTACTCAAATAAACACAAAAAGTTAGGGAAAAACAAGTACTTCTTTGTTCCAATTTATGTGGTACCATTTGACTTGCACAAAGTTTAAAGTAAGAAAGGAAGACTTTTAACATTGTGGTTTAAAACAGACCTTAGTCTTTTGTGCGGCTATAAATCAATTCATTTTAAGGGTAAAAGAGGAAATTTTGAAGTGAATTTTTCCTGATTATAGAAAGGTGACATTCTTTTTGGGACAGACTGGAATAGAAAGCGTGTCACATAAATTGGGATAGAAGAATAACTATGAATTTATTTCCCTGAATGGATGCACTGAGTATATGAGTTCTTGTGGTTACCCAGCTATGTTATATAAATATGAGGACTTTGTAGTACCAAGTTTTTTTGGGGAGGGTGGAGATAGTTATTGCTCTGTTGATTTTCTTCAGTCTTAACTCTTACCTCAATTTGGTAGTTCAATTTTTTAAGCAAGTTGAGAAAATGAACGCCCGTGATAACTCAAATAGACACAGAAAAGATAAGGAAAAAGCTTTTAACTAAGAACTTGTCTCCCTGAAGGGGCACACACAGACAGATATGTTCTTGTGGTTGCCTAGCTATATTGTTCCTCTCTTGATTTTCTGCGGTCTTACATTGATTTGTCTGCTTGAATAGAATCTACAAATTTTACTTCCTGCAAGCAGAGAAGTGGAGAACACAGGACACTCGAATAGTTGCTTGTTCTAGTATAGTGAATTGGGAATGAACTTTTCTTCTATAGTGGTTGATGCCACTGTAAACTGAATTCCTTAATGAATTATGTCTAGGTGCTACTGGAATTTGCTCATTAGTCATTCACTCATTCTGATGTTTCAGCTCATCTCTGATGGTGATTATTTTGCTTCTGTCTTTGTATTTCAGGTTGAAGCTGAAGAACAGCCTGAGATATCTGAGCTGCACTCTGTTTCTGCTGTACCTTACTTTGTCTTCTTCAAGGTATCTAACCTGGGAATTTGCTTTCCTTGTCTATGACTGTTTCTGTTTGTAAACCTTTATTTGCTTCTGAATAGATGGGGAATGAGTTTCTCACCCTCTTCTTGTGCGACTTCTACCTGCATTTCGCTCAGTTCGCTTCCAACTCCCTCTTAGCTATTCTGTGACCTTACTGTTTTGGAGTGTCAGTAGCAGAAGTAATCCTCAGCTCATGCACCAGTTATCCTAAAGACCCCCCCAGCTTTGTTCAGGACTCATCACTTGTGATGTTTTGTTTTGTATAGCTACTGGACGTGGCATTGAGAGTCATGATGATATTACTGCTACTTATCTGCTCAGTTCCATAGTTTTATAAGCGATTAACTCAATGAATTTATTTGTGTTTTGCCAACAAATAAAGTATTGAAATGAGGATTCTGTTTCAACCTTTTTATTACATTATTAACCTAATGATTTTCTTTTTAATTTATTTATAAAGAACAGTCTACCTACTTAGAGGAGACTTTTTACATTGAAAATGTATGTCTTCAGAATAACAATATATTCAGAAGATCCTTAATAACCTAACCACTTAAAAAAATAAAATTCTACTAATTTTTCAGAGTTCCTTTTTGTTCTCCAGATAGTACTTGAATATAAAACTGTCTCTCATTTCTTCATTTATTTCTGTAGAGACTATGCTTGAATATGCTCTGCCAATGACATGTCATTCTTGTGCTCGTAATCTTTGAAAACCATATGCATCTTTAGGTGTTCATGTGATATCACTACTATTTGGTGGCAATTAAGTGAAGGGCAATGGGAAGTATGCGACCTCTCTTACTGTATAAGCTTTACAAATTGTCAACACCGGCTATCTTTCTCGTTAAAATCATGTACTTTCTACTGAAAGCATCCTTAAGTTGGTAAATCTTCAGTGAACTCTATGAGTGCAGTCGGATATAGAAGTCCAGAAACAATCTTACTCTCTCTTCTTCATTTCCGTAGTTCTTCTATGCTAGACCAGTACTTGGCATTTGCAAATTTTAGTCTTCTGTTAAACATCACATCATCAGGGGGTAATTACGTTGATTGCTAGATGTTGTTTTCCCTAATCACTTGTCTTTTGGAGATTCCACTGTCTGTCTCTTTGCCATTATCTTTAGGTGGCTCTATGCAAGTCTCAGAGTAAGGCTTATGCAGTAGATAAATCATCAATGTGGCATTTCAAATTTTTGAGTCACTAACTTCTCTGAAAATGGGACAGATATTTGTAGCTAATTATTTTGAAAAGGTGAACATCTGTTTGCAAGATAAAGAAACATTAAATTCATTTGTATTAGCCTAACAAATATGATATTGCCTCACAAAAATCCAAGATAACATTCTTCAAAAATTAAGTGAAGGTATTCACTAATTGTGTGAATTTGATTAGAAAATTTGTTAGGTTCATCTCATAAGTGGTAGCAGTAATCACTTCCATCTGTAATTGTTTGTGACATTTGAACAATTACCTCTGATTTGAACCTACGTTTTGCATGTCATGCCATCTATAATGTGCTATTGCTTTACTTATTTTAGGAAGGGAAAGCTGTTGATACATTGGAAGGGGCCGATCCATCTAGTTTGGCTAACAAGGTTGCAAAAATTGCTGGGTCAATCACTCCTGGGGATCCTGCCGCTCCTGCTAGCCTAGGAATGGCTGCAGGTCCCTCTGTTCTTGAAGCAATTCAGGAGTTGTCTAGAGAAAACGGTGCCCCTCAAGTGTCAAGTTCTGGTCTTGATGATCGGCTAACAAAGCGACTTCAGCAGCTGGTTTCTTCTCATCCAGTATTGCTTTTCATGAAAGGGACCCCAGAAGAACCCAAGTGTGGTTTTAGTCAGAAAGTCGTTGATATCTTGAAGAAAGAGAAGGTCAAATTTGGAAGTTTTGATATTCTGATGGACAGTGAGGTCCGTGAGGGTCTGAAGAAATTTTCCAATTGGCCAACATATCCTCAACTGTACTGCAAGGGTGAACTTCTT-GGTGGTTGTGATATTGTTATAACTATGCATGAGAGTGGTGAACTTACAGATGTTT</genome_strand>
        <mrna_strand>GGGCTTTTATATAAAACAGCATAAAAGAGGAGAAATTTCGTATTGTTCTTTGAGGGTATTTACTTCACTTCTCATTGAGAAATAGAGAATCTGAAAGAATCGAGAATGGGCGGAGGAGGATCAGTGAAGGAAGTTCAATCGAAGGCGGAGCTTGATAAGATTGTCGCCGACGGATCACCGGCGATTTTGCACTTTTGGGCATCATGGTGTGAAGCTTCTAAGCACATGGACCAAGTCTTTTCGCATCTTTCTACTGATTTCCCACATGCCCATTTTCTAAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAAGCTGAAGAACAGCCTGAGATATCTGAGCTGCACTCTGTTTCTGCTGTACCTTACTTTGTCTTCTTCAAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGGAAAGCTGTTGATACATTGGAAGGGGCCGATCCATCTAGTTTGGCTAACAAGGTTGCAAAAATTGCTGGGTCAATCACTCCTGGGGATCCTGCCGCTCCTGCTAGCCTAGGAATGGCTGCAGGTCCCTCTGTTCTTGAAGCAATTCAGGAGTTGTCTAGAGAAAACGGTGCCCCTCAAGTGTCAAGTTCTGGTCTTGATGATCGGCTAACAAAGCGACTTCAGCAGCTGGTTTCTTCTCATCCAGTATTGCTTTTCATGAAAGGGACCCCAGAAGAACCCAAGTGTGGTTTTAGTCAGAAAGTCGTTGATATCTTGAAGAAAGAGAAGGTCAAATTTGGAAGTTTTGATATTCTGATGGACAGTGAGGTCCGTGAGGGTCTGAAGAAATTTTCCAATTGGCCAACATATCCTCAACTGTACTGCAAGGGTGAACTTCTTGGGTGGTTGTGATATTGTTATAACTATGCATGAGAGTGGTGAACTTTCCGATGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U563568" ref_strand="+" ref_description="SGN-U563568 Tomato 200607#2 [7 ESTs aligned] (*GB) gi|118486067|gb|ABK94877.1| (e_value=8e-94) unknown; (*ATH) AT4G04950.1 (e_value=9e-91) | Symbol: None | thioredoxin family protein, similar to PKCq-interacting protein PICOT from (Mus musculus) GI:6840949, (Rattus norvegicus) GI:6840951; contains Pfam profile PF00085: Thioredoxin | chr4:2517664-2519947 REVERSE | Aliases: T1J1.6, T1J1_6; (*SWP) sp|Q9ZPH2|GRS17_ARATH (e_value=8e-90) Monothiol glutaredoxin-S17 OS=Arabidopsis thaliana GN=GRXS17; ">
      <seq>gagtactgccttgactactcgtcttgcaggtctgataaactctagcccagttatgctgtttatgaaaggaacagttgatgaaccccggtgtggattcagcagaaaggtggtggatattctcaaacaggagaaagtggagtttgagacttttgacattctttctgatgatgaagtccgtcaaggactgaaattttattccaactggtctagttatccacagctgtacataaagggtgaacttattggtggatcagacattgtactggagatgcaaaagagcggtgagtttaggaaggttctgactgagaaggggatacaccagaaagttagtcttgaagaccgtttaaagaatctactgaattcctcacctgtaatgctcttcatgaagggtacaccagattctccaagatgtggtttcagctccaaggtggtaaatgccttgaaggaggaaggggttgattttggatcctttgatattctatccgacgaagaagtaaggcagggactgaagaccttctctaactggccaacttatccgcagctgtattacaaaggcgaacttgtaggaggatgtgatatcgtgctggaattacatagcgggggtgaattgaagtcaacattatctgaatagaagaacccccaaccagtccaggttgcgcgtatcagacataacatgttagctgtgaggccttacatgttgtgtcgacgtgattttgatggtatttgaacaagaatttcatgttatgagagcagcacttttagagatggttactgttactctagtctctaatttgtctgagtcctgagtttgatatttattcagtgtcatgaattatgtatgcttctgtagaggaccttatttttcttatcttagtttgcctatggttgattctgctttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="+" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="49821" stop="51319"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50121" g_stop="51019" g_length="899"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="899" r_length="899" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="+" ref_id="SGN-U563568" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>899</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U563568" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50121" e_stop="51019"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTACTGCCTTGACTACTCGTCTTGCAGGTCTGATAAACTCTAGCCCAGTTATGCTGTTTATGAAAGGAACAGTTGATGAACCCCGGTGTGGATTCAGCAGAAAGGTGGTGGATATTCTCAAACAGGAGAAAGTGGAGTTTGAGACTTTTGACATTCTTTCTGATGATGAAGTCCGTCAAGGACTGAAAGTTTATTCCAACTGGTCTAGTTATCCACAGCTGTACATAAAGGGTGAACTTATTGGTGGATCAGACATTGTACTGGAGATGCAAAAGAGCGGTGAGTTTAGGAAGGTTCTGACTGAGAAGGGGATACACCAGAAAGTTAGTCTTGAAGACCGTTTAAAGAATCTACTGAATTCCTCACCTGTAATGCTCTTCATGAAGGGTACACCAGATTCTCCAAGATGTGGTTTCAGCTCCAAGGTGGTAAATGCCTTGAAGGAGGAAGGGGTTGATTTTGGATCCTTTGATATTCTATCCGACGAAGAAGTAAGGCAGGGACTGAAGACCTTCTCTAACTGGCCAACTTATCCGCAGCTGTATTACAAAGGCGAACTTGTAGGAGGATGTGATATCGTGCTGGAATTACATAGCGGGGGTGAATTGAAGTCAACATTATCTGAATAGAAGAACCCCCAACCAGTCCAGGTTGCGCGTATCAGACATAACATGTTAGCTGTGAGGCCTTACATGTTGTGTCGACGTGATTTTGATGGTATTTGAACAAGAATTTCATGTTATGAGAGCAGCACTTTTAGAGATGGTTACTGTTACTCTAGTCTCTAATTTGTCTGAGTCCTGAGTTTGATATTTATTCAGTGTCATGAATTATGTATGCTTCTGTAGAGGACCTTATTTTTCTTATCTTAGTTTGCCTATGGTTGATTCTGCTTTC</genome_strand>
        <mrna_strand>GAGTACTGCCTTGACTACTCGTCTTGCAGGTCTGATAAACTCTAGCCCAGTTATGCTGTTTATGAAAGGAACAGTTGATGAACCCCGGTGTGGATTCAGCAGAAAGGTGGTGGATATTCTCAAACAGGAGAAAGTGGAGTTTGAGACTTTTGACATTCTTTCTGATGATGAAGTCCGTCAAGGACTGAAATTTTATTCCAACTGGTCTAGTTATCCACAGCTGTACATAAAGGGTGAACTTATTGGTGGATCAGACATTGTACTGGAGATGCAAAAGAGCGGTGAGTTTAGGAAGGTTCTGACTGAGAAGGGGATACACCAGAAAGTTAGTCTTGAAGACCGTTTAAAGAATCTACTGAATTCCTCACCTGTAATGCTCTTCATGAAGGGTACACCAGATTCTCCAAGATGTGGTTTCAGCTCCAAGGTGGTAAATGCCTTGAAGGAGGAAGGGGTTGATTTTGGATCCTTTGATATTCTATCCGACGAAGAAGTAAGGCAGGGACTGAAGACCTTCTCTAACTGGCCAACTTATCCGCAGCTGTATTACAAAGGCGAACTTGTAGGAGGATGTGATATCGTGCTGGAATTACATAGCGGGGGTGAATTGAAGTCAACATTATCTGAATAGAAGAACCCCCAACCAGTCCAGGTTGCGCGTATCAGACATAACATGTTAGCTGTGAGGCCTTACATGTTGTGTCGACGTGATTTTGATGGTATTTGAACAAGAATTTCATGTTATGAGAGCAGCACTTTTAGAGATGGTTACTGTTACTCTAGTCTCTAATTTGTCTGAGTCCTGAGTTTGATATTTATTCAGTGTCATGAATTATGTATGCTTCTGTAGAGGACCTTATTTTTCTTATCTTAGTTTGCCTATGGTTGATTCTGCTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604294" ref_strand="+" ref_description="SGN-U604294 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147778209|emb|CAN72043.1| (e_value=4e-13) hypothetical; ">
      <seq>ggtatcatactcatgaatcagttgatacatccgaccttcctttattttctgtggattatctccaacttctcccacatttcctttgtagtcttacatctataggtgtttttgaactcttccatgctcaaagcacagtaaagtatgtgtttggctctagcattggtttgcaggacatccatttgttctcttgtataggatgcctcgtcgtcatgttcctttccttcctgatcaccaggaattggtagtggtccgttctgtatgattagccatgattgaaggtcaactgattgcacatacacactcattctagccttccaatgacgataatgtttcccatcgaagtattgtggccttgaatcttcttcttctggttgaagatatccttctgcaatgtgataactagccattggtgttttctcactttctgctatgcaaaaacaaacttgtcagaggcttaagaaaatatgctggaacataagtcgaatgttccaatggcagtcacaattatattatatatatacaaaatatgattttaaattggaaaaattatgtggttaagcaatcttatactacttaatcggtagttatatctatagcttgctataattttcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="-" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="53076" stop="51864"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52777" g_stop="52164" g_length="614"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="614" r_length="614" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="-" ref_id="SGN-U604294" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U604294" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52777" e_stop="52164"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTATCATACTCATGAATCAGTTGATACATCCGACCTTCCTTTATTTTCTGTGGATTATCTCCAACTTCTCCCACATTTCCTTTGTAGTCTTACATCTATAGGTGTTTTTGAACTCTTCCATGCTCAAAGCACAGTAAAGTATGTGTTTGGCTCTAGCATTGGTTTGCAGGACATCCATTTGTTCTCTTGTATAGGATGCCTCGTCGTCATGTTCCTTTCCTTCCTGATCACCAGGAATTGGTAGTGGTCCGTTCTGTATGATTAGCCATGATTGAAGGTCAACTGATTGCACATACACACTCATTCTAGCCTTCCAATGACGATAATGTTTCCCATCGAAGTATTGTGGCCTTGAATCTTCTTCTTCTGGTTGAAGATATCCTTCTGCAATGTGATAACTAGCCATTGGTGTTTTCTCACTTTCTGCTATGCAAAAACAAACTTGTCAGAGGCTTAAGAAAATATGCTGGAACATAAGTCGAATGTTCCAATGGCAGTCACAATTATATTATATATATACAAAATATGATTTTAAATTGGAAAAATTATGTGGTTAAGCAATCTTATACTACTTAATCGGTAGTTATATCTATAGCTTGCTATAATTTTCACT</genome_strand>
        <mrna_strand>GGTATCATACTCATGAATCAGTTGATACATCCGACCTTCCTTTATTTTCTGTGGATTATCTCCAACTTCTCCCACATTTCCTTTGTAGTCTTACATCTATAGGTGTTTTTGAACTCTTCCATGCTCAAAGCACAGTAAAGTATGTGTTTGGCTCTAGCATTGGTTTGCAGGACATCCATTTGTTCTCTTGTATAGGATGCCTCGTCGTCATGTTCCTTTCCTTCCTGATCACCAGGAATTGGTAGTGGTCCGTTCTGTATGATTAGCCATGATTGAAGGTCAACTGATTGCACATACACACTCATTCTAGCCTTCCAATGACGATAATGTTTCCCATCGAAGTATTGTGGCCTTGAATCTTCTTCTTCTGGTTGAAGATATCCTTCTGCAATGTGATAACTAGCCATTGGTGTTTTCTCACTTTCTGCTATGCAAAAACAAACTTGTCAGAGGCTTAAGAAAATATGCTGGAACATAAGTCGAATGTTCCAATGGCAGTCACAATTATATTATATATATACAAAATATGATTTTAAATTGGAAAAATTATGTGGTTAAGCAATCTTATACTACTTAATCGGTAGTTATATCTATAGCTTGCTATAATTTTCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U574605" ref_strand="+" ref_description="SGN-U574605 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|147783080|emb|CAN64249.1| (e_value=1e-14) hypothetical; (*ATH) AT3G63095.1 (e_value=7e-13) |; ">
      <seq>caaatgatgacaattacaatttattactcaatacaatgagtcataatttaaagttttaggagttttaattaagtaaaggcccatatcccttcctaaaaatctttacttattgtaaataaagtaggtaattagtagtagttatggagagtgtggtgacttctgatgatcattttgttggaacctagcggaggaagcacacgtgaaagttacactgcaagttgcatgagccaaagtagtatactgatggattggcctagaaaggaaaataggcagatgagccaatagagaacaaacacattcgctatcgacagctttcatccacctacaacattcctcttctactggagtttgtgtattatacccaagattcgtagaaggtgtaggtgcaggtgcaggcgcggttgctggagaggatacaggtgcaggtcctggtggaggcaaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="+" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="67901" stop="68944"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68201" g_stop="68644" g_length="444"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="444" r_length="444" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="+" ref_id="SGN-U574605" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>444</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U574605" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68201" e_stop="68644"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATGATGACAATTACAATTTATTACTCAATACAATGAGTCATAATTTAAAGTTTTAGGAGTTTTAATTAAGTAAAGGCCCATATCCCTTCCTAAAAATCTTTACTTATTGTAAATAAAGTAGGTAATTAGTAGTAGTTATGGAGAGTGTGGTGACTTCTGATGATCATTTTGTTGGAACCTAGCGGAGGAAGCACACGTGAAAGTTACACTGCAAGTTGCATGAGCCAAAGTAGTATACTGATGGATTGGCCTAGAAAGGAAAATAGGCAGATGAGCCAATAGAGAACAAACACATTCGCTATCGACAGCTTTCATCCACCTACAACATTCCTCTTCTACTGGAGTTTGTGTATTATACCCAAGATTCGTAGAAGGTGTAGGTGCAGGTGCAGGCGCGGGTGCTGGAGAGGATACAGGTGCAGGTCCTGGTGGAGGCAAAGG</genome_strand>
        <mrna_strand>CAAATGATGACAATTACAATTTATTACTCAATACAATGAGTCATAATTTAAAGTTTTAGGAGTTTTAATTAAGTAAAGGCCCATATCCCTTCCTAAAAATCTTTACTTATTGTAAATAAAGTAGGTAATTAGTAGTAGTTATGGAGAGTGTGGTGACTTCTGATGATCATTTTGTTGGAACCTAGCGGAGGAAGCACACGTGAAAGTTACACTGCAAGTTGCATGAGCCAAAGTAGTATACTGATGGATTGGCCTAGAAAGGAAAATAGGCAGATGAGCCAATAGAGAACAAACACATTCGCTATCGACAGCTTTCATCCACCTACAACATTCCTCTTCTACTGGAGTTTGTGTATTATACCCAAGATTCGTAGAAGGTGTAGGTGCAGGTGCAGGCGCGGTTGCTGGAGAGGATACAGGTGCAGGTCCTGGTGGAGGCAAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565177" ref_strand="+" ref_description="SGN-U565177 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|22795037|gb|AAN05420.1| (e_value=3e-37) putative RING protein [Populus x canescens]; (*ATH) AT4G27470.1 (e_value=3e-28) | Symbol: None | zinc finger (C3HC4-type RING finger) family protein, contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) | chr4:13735005-13736524 FORWARD | Aliases: F27G19.70, F27G19_70; (*SWP) sp|Q5M807|RNF5_RAT (e_value=2e-21) E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus GN=Rnf5; ">
      <seq>ctttaaagaaacctattttcttctctatttcctctgtttaatcacctgggattctccattcgaagcttgaaagtctaaaactttggttgttttttcaacccttttgcttgattgatttgggaagacccttgggttgaacaagtgctcagaaacaaatctcatggccttggagcagtattattcaaacgagtggaaatcgatccctactccagaatcatcagactcagagaagacttctgcctgctttgattgcaacatctgcttggactttgcccgcgatccggttattactctttgtggccatctctattgttggccctgcatttacaagtggcttcactttcagagtgattctctgtcttcggatgaacgccctcaatgtccagtttgcaaggctgaaatctcccaaacagatttagtccctctttacgggcgtggggaaacactacctgaatctgagcctgaaaacaagctcactctaaaagtgcctcccaggccacctgctttcagtccatcatccatgtcaaactcctttaacccttctcagcaaccaccacatcctaatgcctatgatccccatgccagttacctcaacagttcatcgcctccttcattcagtctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="-" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="75697" stop="73413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75397" g_stop="75284" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75283" i_stop="74221" i_length="1063">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74220" g_stop="73713" g_length="508"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="622" r_length="508" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="-" ref_id="SGN-U565177" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U565177" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75397" e_stop="75284"/>
          <exon e_start="74220" e_stop="73713"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTAAAGAAACCTATTTTCTTCTCTATTTCCTCTGTTTAATCACCTGGGATTCTCCATTCGAAGCTTGAAAGTCTAAAACTTTGGTTGTTTTTTCAACCCTTTTGCTTGATTGGTAAGAATTTTAGCTCTTCCTCTTCTTTCTTGAATATTAAAACTGATTTTGCCTTGTTCTGTGGTGATTATTGGTGTGTAAAGGTTGGATCTTTGATGGGGTTTTCTCTCTTGATCTGTATGGTACTATCTTCAAAAAAAATTCTTGTGTTTGATCATTTTGTACTACTATAGATGATCTTTATTGATACTATTTAAGTCTTCACCTTCTACCCGCCATAAACAAATGATTTTTTTTGGATTTTCTTGACCTTATGGTTATGAAATAGAAGAGAATTTCATTAGATATATCTGAAAATGCCATGAATGCTAAATGAACATTTGTTGTTGATCATGTTTGGTAGTTTTTTCAACCATTTGAATTGGGGGTAGATGAGGAAGATGGAGAGGATAGTTTAAGGGGTATATATTTTGATTAAACTAAGATTTGACTATAAGATAGATTCAAGATTGAGACATTTTTGTCAAACTGATGCAATTAGTTTGCCCAACTAATTCTGGAAATTTAGTTCTAAGTAGACCTGATTTGATGCAGTGGAAAGAATAGGCTATTTGATCTTTTTCTGATAATTTTTATGAAAGAAACAAGATAAGGTTTGGGCTTGGGACTTCCATGTTGGAGGTCTCATATTTGTCTCGATCGAGCTGGTCGCACCAGGCTTGCCTAGTTCGGGTTTCCTCTCCTACGTGGTTTGTGAGCTATTACATAGAAGCGGGGGTTTTACTTGGGCGCACCCAAAGGGTTAGCGGCTGCGGGTTTTTCTTTTCGTCAAAAGAAAAAAAAGTGCATATCATTTTTCTGATCTAACTGATCTCCATCTCCCTTGGTTGCTATGGATTGCTTTGAAGCTTCACTAATCTTATAAAATTTGTTTTTTATTCACATGCTTTGTCTTTTTGTTCTCTTCTGTTGTGTGGTAGGTGGAACTTGGAAGCTACTATCTAGCTTCCTCCCCGCCCTTTTAATTCTTAATGCAGTAGCCGGCCTACTAATGCTCAACAATTTCTTTAATACTTTGATTTAAATTTACTTTTCTTGTTGCTAACTAAGATTGTGATTTCAGATTTGGGAAGACCCTTGGGTTGAACAAGTGCTCAGAAACAAATCTCATGGCCTTGGAGCAGTATTATTCAAACGAGTGGAAATCGATCCCTACTCCAGAATCATCAGACTCAGAGAAGACTTCTGCCTGCTTTGATTGCAACATCTGCTTGGACTTTGCCCGCGATCCGGTTATTACTCTTTGTGGCCATCTCTATTGTTGGCCCTGCATTTACAAGTGGCTTCACTTTCAGAGTGATTCTCTGTCTTCGGATGAACGCCCTCAATGTCCAGTTTGCAAGGCTGAAATCTCCCAAACAGATTTAGTCCCTCTTTACGGGCGTGGGGAAACACTACCTGAATCTGAGCCTGAAAACAAGCTCACTCTAAAAGTGCCTCCCAGGCCACCTGCTTTCAGTCCATCATCCATGTCAAACTCCTTTAACCCTTCTCAGCAACCACCACATCCTAATGCCTATGATCCCCATGCCAGTTACCTCAACAGTTCATCGCCTCCTTCATTCAGTCTC</genome_strand>
        <mrna_strand>CTTTAAAGAAACCTATTTTCTTCTCTATTTCCTCTGTTTAATCACCTGGGATTCTCCATTCGAAGCTTGAAAGTCTAAAACTTTGGTTGTTTTTTCAACCCTTTTGCTTGATTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGGAAGACCCTTGGGTTGAACAAGTGCTCAGAAACAAATCTCATGGCCTTGGAGCAGTATTATTCAAACGAGTGGAAATCGATCCCTACTCCAGAATCATCAGACTCAGAGAAGACTTCTGCCTGCTTTGATTGCAACATCTGCTTGGACTTTGCCCGCGATCCGGTTATTACTCTTTGTGGCCATCTCTATTGTTGGCCCTGCATTTACAAGTGGCTTCACTTTCAGAGTGATTCTCTGTCTTCGGATGAACGCCCTCAATGTCCAGTTTGCAAGGCTGAAATCTCCCAAACAGATTTAGTCCCTCTTTACGGGCGTGGGGAAACACTACCTGAATCTGAGCCTGAAAACAAGCTCACTCTAAAAGTGCCTCCCAGGCCACCTGCTTTCAGTCCATCATCCATGTCAAACTCCTTTAACCCTTCTCAGCAACCACCACATCCTAATGCCTATGATCCCCATGCCAGTTACCTCAACAGTTCATCGCCTCCTTCATTCAGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586709" ref_strand="+" ref_description="SGN-U586709 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|217071536|gb|ACJ84128.1| (e_value=4e-47) unknown; (*ATH) AT1G02680.1 (e_value=4e-42)  Symbol: None | transcription initiation factor IID (TFIID) 18 kDa subunit (TAFII-18) family protein, similar to transcription factor TFIID (SP:Q15543) (Homo sapiens); contains Pfam PF02269: Transcription initiation factor IID, 18kD subunit | chr1:58... ; (*SWP) sp|Q54CN8|TAF13_DICDI (e_value=2e-23) Transcription initiation factor TFIID subunit 13 OS=Dictyostelium discoideum GN=taf13; ">
      <seq>gatttctagtaaatttgagcggatgtccccttataccctaataattttggaattttaatttgaaattctgtttacaattgtgctctcgtcatctccagtggaatcaacacttttgcaggttgagaggtggacgttaaaataaattgaaaatgaacaactcttctgcagggccatcctcaaaagctagagtaggagcatcacaaccttcagaaagttcacttaagaggaaacgtggcatgtttcagaaagatttgcaacacatgatgtatggttttggagatgatagcaatccacttccagaaactgtgtcacttgttgaagacatcgtggtggattatgtcactgatatggtgcacaaagctcaggatattgcaaccaaaagggggaagcttttgaccgaggactttctgttcttaattagaaaggacttgccgaaacttaaccggtgtacagaactgttgtccatgaatgaggagctgaaacaagctcggaaggctttcgaggtcgatgaagagaaattggcttcacatcagtgaaggggaagtgtgatcttagttcagaatgacaaattgagtggcaccgtaggaccagtatacagtttaacctactctggagtaaatagcctgcttgttctcatttttcgctagcacaatcgatgtctgagtcaccttgtagctgcgtttactcttgcacaatagatcttcgatgctgaaatcagtttcttaagtgttctattggtgcattgaacgccacctgtgtgtagtttggcagttctaaagatggtggtgtcaggtatttataatttcatcaatctacttgtttgtagatctgcacaaactgatggaatgagttgtaagttaactctgagtagtcacccaattagattgattttgatctgtttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="+" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="77618" stop="81623"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77917" g_stop="78034" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="118" r_length="118" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78035" i_stop="78672" i_length="638">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78673" g_stop="78806" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="252" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="78807" i_stop="78894" i_length="88">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78895" g_stop="78932" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="290" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78933" i_stop="79713" i_length="781">
            <donor d_prob="0.952" d_score="0.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79714" g_stop="79773" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="350" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="79774" i_stop="79936" i_length="163">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="79937" g_stop="80011" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="425" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="80012" i_stop="80845" i_length="834">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="80846" g_stop="81323" g_length="478"/>
          <reference_exon_boundary r_type="cDNA" r_start="426" r_stop="903" r_length="478" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="+" ref_id="SGN-U586709" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>903</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U586709" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77917" e_stop="78034"/>
          <exon e_start="78673" e_stop="78806"/>
          <exon e_start="78895" e_stop="78932"/>
          <exon e_start="79714" e_stop="79773"/>
          <exon e_start="79937" e_stop="80011"/>
          <exon e_start="80846" e_stop="81323"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTCTAGTAAATTTGAGCGGATGTCCCCTTATACCCTAATAATTTTGGAATTTTAATTTGAAATTCTGTTTACAATTGTGCTCTCGTCATCTCCAGTGGAATCAACACTTTTGCAGGTTTCTCTTCGGAATTCTTTTTCTCTTTTACGATCCTAATTGTGATTGTGGCTGCAGAAATTAATTAATTTATGTTTTATGTGCTCTTGCATTCTCTTCCTTTTCTTCAATTCATTCATACTCCTGGTCTCCTGGATGTTGATTGTTTGATAACTGTGTTTTTAATTATTATTTTGTTGTTGATGAATTAGCCCAATTCGCGTCTGTCCCACTTTGGATTTTGTATAACAAAGCTTCAGTAATGGCTTCCACACAATGTACATATAGAAAAAAAATAGATTTAACTTTTAATCTTTCATGAATTCTATTATTTGATGATCATTTACAGTAAAAGAACTTTTTTCCAGTTATTATATGGGATGTGTCTATATTGGGTGCTTATTTTGGGAGCTGCATAGAAGAATGTATGTTCCATCTTTACCATGAGCTTCCTTTTTTATAGAACCGGAAAATTTTGAGCTAATTGTGTAGGCGGTTAAGTGGTGATAACCATTATAAGAACTATGGAAGTGCATTCTTTGTGCGTTCAGTTTTCTGTTTTTTTTTTCAATGGTACTTGCGTGATGTATCTGTCAGATAATAATATATGATACGTTTGATTGATGGTATTTGCTAAGGATGGTATGACACTTTGGCAGGTTGAGAGGTGGACGTTAAAATAAATTGAAAATGAACAACTCTTCTGCAGGGCCATCCTCAAAAGCTAGAGTAGGAGCATCACAACCTTCAGAAAGTTCACTTAAGAGGAAACGTGGCATGTTTCAGAAAGATTGTTAGTAACTCTTTATGTAGATGTGATAATAATGTTAAATCACTTCATCTTGTTTTATTTATTAATATTTCTTTTATTTATTACACAGTGCAACACATGATGTATGGTTTTGGAGATGATAGCAATGTAAGATGCCTCTTTGTTTCACTTTTTATCTCTTCATTGTTTTTCATCTGCGCATGTCCATGGTGTTTATATGCGTTGATTGTTGTGTGTATGGCAATACAGTGAATTATGTCAAGCTGCTGTCACCTAGCTTTTCTTTTCTCTGTACAAACATTGGTAGTGGGAAAAGTTGCAGTTTGTATAGAACAGATTGAATATGGCCTTCGCTTGTTACTTAATGTTTAACAAAAATCACTCACCGGCTATGGGAAATACTTTTATTTTCTTTGATGATTGTTCTAAGCTTGTGTCTAGGATCTAGCAATAATGTCTGAAGGAACTTTTGGGAGGACCAAGGACCTGTGCTGATTCTAAGGAAAGAACAGAAACTCGGTGTTGGAGTTTTGTAATGATGTTGTCTAGTTGTCTTTTAAAAGGAATAATCTTTGTTGCTGGAGTACAGTCCTTTTTCTTGTTTTACCACATCTTGCTTTCCCTGTTGCACAAGGGAATAGAGCGCGGTCATAATGCATTAGTGACTCCATCGTAAAACAGAGATAATTTTGCTGGAAGATTTTCTTATTGATATGTTCCCTTTGGCAGCTGTATGTTTATTGTTTCTAATTTAGTCAACTAATACTGGACTTGGAGATGGTTGATTACCTTATAGGTTACATAAAAGATAATGGTCGATTACCTGTAAATATCAAAAGAATTGTCTGGAAGTTATTTGATTTTCTATGAGTTGCTGGTATTATTTTGTCCCTTGATCTTTACTAAACTAATAGTGTTGCACTATCAGCCACTTCCAGAAACTGTGTCACTTGTTGAAGACATCGTGGTGGATTATGTCACTGATATGGTGAGTTGAACTTACTACTATACAGTGCTATTCTTTCGAAGAGGTTTCAGAATATACATCTTCCAGATAAAACTTTGCATTCTACACAATTTATTTTCTTCAGTATTTGATTTAGAAGAAACATGCATATGGTCCTATCTTTTAAGCTCTTCAACTTGGGTAGGTGCACAAAGCTCAGGATATTGCAACCAAAAGGGGGAAGCTTTTGACCGAGGACTTTCTGTTCTTAATTAGAAAGGTCAGTCTTTTTGTGAATTCAACATGCATATATATAATATATATGCATATCTGAATCTGCAGCATTATGGCGAATATTTAGTTGAAAAATGTCCGTCTCATTTTCGCTCAATGAGTGGTCTTGAGAGTTTTCTATATTATTTCATTTAAGAACATTAAGGGAACTATTAGACCAGCCTATTAGTGGAACAAAGTCATATACAAGTGTCCGGATAGCCAAGTGTAGTTGGACAGAAGCTGAGATTTGTAGTTTTGCTCATCTCAAGCTTAATTACTACTTTAAGGTTTTATTTGTTGCTATTATTTTGGCTTACCTCATGCGTGTTAGTACTGCTATCACACTGAATAATTGGTTTCATTATGATAGATCGTAGTTTAGTTCATGTATCACCATTATAGAATTGTATCTGAAAATAGTTTCAATGGTAATTTCATGTTTGTTTGTGCCTGATAAACCTGAAACTCTTCTGGGACTAGTTTGATGTCTCCATGCCAACGAGAAATGCCAATAATAGTTAGCTTCTTACTATGTTGATCATTAAAACAACAAATTACTCCATCTTTTGGTTGGGTAGAATTACGCTGGGAGATTGTTGCGTCGCCTTCACCTTCCATCTATTTAGTGCCACGTGCCTCTTCTATTGTGCTGCTTACTGGTTTCTCTTGCTGTGATTTGAATATATTTCAACACGTCTTTAGTTGTCAAAAAGAGTATGGATGGTTGTTCTGAAAAATCAGTCCTGCTTTGCTACCTCTACAAACTGGATTATGGTGTTACTGCAAATTTTGCTTTATGAGCTTCTAAATTTTGGATGGATACTGTTCTATTGTGCAGGACTTGCCGAAACTTAACCGGTGTACAGAACTGTTGTCCATGAATGAGGAGCTGAAACAAGCTCGGAAGGCTTTCGAGGTCGATGAAGAGAAATTGGCTTCACATCAGTGAAGGGGAAGTGTGATCTTAGTTCAGAATGACAAATTGAGTGGCACCGTAGGACCAGTATACAGTTTAACCTACTCTGGAGTAAATAGCCTGCTTGTTCTCATTTTTCGCTAGCACAATCGATGTCTGAGTCACCTTGTAGCTGCGTTTACTCTTGCACAATAGATCTTCGATGCTGAAATCAGTTTCTTAAGTGTTCTATTGGTGCATTGAACGCCACCTGTGTGTAGTTTGGCAGTTCTAAAGATGGTGGTGTCAGGTATTTATAATTTCATCAATCTACTTGTTTGTAGATCTGCACAAACTGATGGAATGAGTTGTAAGTTAACTCTGAGTAGTCACCCAATTAGATTGATTTTGATCTGTTTGC</genome_strand>
        <mrna_strand>GATTTCTAGTAAATTTGAGCGGATGTCCCCTTATACCCTAATAATTTTGGAATTTTAATTTGAAATTCTGTTTACAATTGTGCTCTCGTCATCTCCAGTGGAATCAACACTTTTGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGAGGTGGACGTTAAAATAAATTGAAAATGAACAACTCTTCTGCAGGGCCATCCTCAAAAGCTAGAGTAGGAGCATCACAACCTTCAGAAAGTTCACTTAAGAGGAAACGTGGCATGTTTCAGAAAGATT........................................................................................TGCAACACATGATGTATGGTTTTGGAGATGATAGCAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTTCCAGAAACTGTGTCACTTGTTGAAGACATCGTGGTGGATTATGTCACTGATATG...................................................................................................................................................................GTGCACAAAGCTCAGGATATTGCAACCAAAAGGGGGAAGCTTTTGACCGAGGACTTTCTGTTCTTAATTAGAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGCCGAAACTTAACCGGTGTACAGAACTGTTGTCCATGAATGAGGAGCTGAAACAAGCTCGGAAGGCTTTCGAGGTCGATGAAGAGAAATTGGCTTCACATCAGTGAAGGGGAAGTGTGATCTTAGTTCAGAATGACAAATTGAGTGGCACCGTAGGACCAGTATACAGTTTAACCTACTCTGGAGTAAATAGCCTGCTTGTTCTCATTTTTCGCTAGCACAATCGATGTCTGAGTCACCTTGTAGCTGCGTTTACTCTTGCACAATAGATCTTCGATGCTGAAATCAGTTTCTTAAGTGTTCTATTGGTGCATTGAACGCCACCTGTGTGTAGTTTGGCAGTTCTAAAGATGGTGGTGTCAGGTATTTATAATTTCATCAATCTACTTGTTTGTAGATCTGCACAAACTGATGGAATGAGTTGTAAGTTAACTCTGAGTAGTCACCCAATTAGATTGATTTTGATCTGTTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U572407" ref_strand="+" ref_description="SGN-U572407 Tomato 200607#2 [10 ESTs aligned] (*GB) gi|217071536|gb|ACJ84128.1| (e_value=3e-47) unknown; (*ATH) AT1G02680.1 (e_value=3e-42)  Symbol: None | transcription initiation factor IID (TFIID) 18 kDa subunit (TAFII-18) family protein, similar to transcription factor TFIID (SP:Q15543) (Homo sapiens); contains Pfam PF02269: Transcription initiation factor IID, 18kD subunit | chr1:58... ; (*SWP) sp|Q54CN8|TAF13_DICDI (e_value=2e-23) Transcription initiation factor TFIID subunit 13 OS=Dictyostelium discoideum GN=taf13; ">
      <seq>gaaatttgagcggatgtccccttataccctaataattttggaattttaatttgaaattctgtttacaattgtgctctcgtcatctccagtggaatcaacacttttgcaggttgagaggtggacgttaaaataaattgaaaatgaacaactcttctgcagggccatcctcaaaagctagagtaggagcatcacaaccttcagaaagttcacttaagaggaaacgtggcatgtttcagaaagatttgcaacacatgatgtatggttttggagatgatagcaatccacttccagaaactgtgtcacttgttgaagacatcgtggtggattatgtcactgatatggtgcacaaagctcaggatattgcaaccaaaagggggaagcttttgaccgaggactttctgttcttaattagaaaggacttgccgaaacttaaccggtgtacagaactgttgtccatgaatgaggagctgaaacaagctcggaaggctttcgaggtcgatgaagagaaattggcttcacatcagtgaaggggaagtgtgatcttagttcagaatgacaaattgagtggcaccgtaggaccagtatacagtttaacctactctggagtaaatagcctgcttgttctcatttttcgctagcacaatcgatgtctgagtcaccttgtagctgcgtttactcttgcacaatagatcttcgatgctgaaatcagtttcttaagtgttctattggtgcattgaacgccacctgtgtgtagttgggcagttctaaagatggtggtgtcaggtatttataatttcatcaatctacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="+" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="77627" stop="81539"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77926" g_stop="78034" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78035" i_stop="78672" i_length="638">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78673" g_stop="78806" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="243" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="78807" i_stop="78894" i_length="88">
            <donor d_prob="0.718" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78895" g_stop="78932" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="281" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78933" i_stop="79713" i_length="781">
            <donor d_prob="0.952" d_score="0.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="79714" g_stop="79773" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="341" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="79774" i_stop="79936" i_length="163">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="79937" g_stop="80011" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="416" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="80012" i_stop="80845" i_length="834">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="80846" g_stop="81239" g_length="394"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="810" r_length="394" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="+" ref_id="SGN-U572407" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>810</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U572407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77926" e_stop="78034"/>
          <exon e_start="78673" e_stop="78806"/>
          <exon e_start="78895" e_stop="78932"/>
          <exon e_start="79714" e_stop="79773"/>
          <exon e_start="79937" e_stop="80011"/>
          <exon e_start="80846" e_stop="81239"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAATTTGAGCGGATGTCCCCTTATACCCTAATAATTTTGGAATTTTAATTTGAAATTCTGTTTACAATTGTGCTCTCGTCATCTCCAGTGGAATCAACACTTTTGCAGGTTTCTCTTCGGAATTCTTTTTCTCTTTTACGATCCTAATTGTGATTGTGGCTGCAGAAATTAATTAATTTATGTTTTATGTGCTCTTGCATTCTCTTCCTTTTCTTCAATTCATTCATACTCCTGGTCTCCTGGATGTTGATTGTTTGATAACTGTGTTTTTAATTATTATTTTGTTGTTGATGAATTAGCCCAATTCGCGTCTGTCCCACTTTGGATTTTGTATAACAAAGCTTCAGTAATGGCTTCCACACAATGTACATATAGAAAAAAAATAGATTTAACTTTTAATCTTTCATGAATTCTATTATTTGATGATCATTTACAGTAAAAGAACTTTTTTCCAGTTATTATATGGGATGTGTCTATATTGGGTGCTTATTTTGGGAGCTGCATAGAAGAATGTATGTTCCATCTTTACCATGAGCTTCCTTTTTTATAGAACCGGAAAATTTTGAGCTAATTGTGTAGGCGGTTAAGTGGTGATAACCATTATAAGAACTATGGAAGTGCATTCTTTGTGCGTTCAGTTTTCTGTTTTTTTTTTCAATGGTACTTGCGTGATGTATCTGTCAGATAATAATATATGATACGTTTGATTGATGGTATTTGCTAAGGATGGTATGACACTTTGGCAGGTTGAGAGGTGGACGTTAAAATAAATTGAAAATGAACAACTCTTCTGCAGGGCCATCCTCAAAAGCTAGAGTAGGAGCATCACAACCTTCAGAAAGTTCACTTAAGAGGAAACGTGGCATGTTTCAGAAAGATTGTTAGTAACTCTTTATGTAGATGTGATAATAATGTTAAATCACTTCATCTTGTTTTATTTATTAATATTTCTTTTATTTATTACACAGTGCAACACATGATGTATGGTTTTGGAGATGATAGCAATGTAAGATGCCTCTTTGTTTCACTTTTTATCTCTTCATTGTTTTTCATCTGCGCATGTCCATGGTGTTTATATGCGTTGATTGTTGTGTGTATGGCAATACAGTGAATTATGTCAAGCTGCTGTCACCTAGCTTTTCTTTTCTCTGTACAAACATTGGTAGTGGGAAAAGTTGCAGTTTGTATAGAACAGATTGAATATGGCCTTCGCTTGTTACTTAATGTTTAACAAAAATCACTCACCGGCTATGGGAAATACTTTTATTTTCTTTGATGATTGTTCTAAGCTTGTGTCTAGGATCTAGCAATAATGTCTGAAGGAACTTTTGGGAGGACCAAGGACCTGTGCTGATTCTAAGGAAAGAACAGAAACTCGGTGTTGGAGTTTTGTAATGATGTTGTCTAGTTGTCTTTTAAAAGGAATAATCTTTGTTGCTGGAGTACAGTCCTTTTTCTTGTTTTACCACATCTTGCTTTCCCTGTTGCACAAGGGAATAGAGCGCGGTCATAATGCATTAGTGACTCCATCGTAAAACAGAGATAATTTTGCTGGAAGATTTTCTTATTGATATGTTCCCTTTGGCAGCTGTATGTTTATTGTTTCTAATTTAGTCAACTAATACTGGACTTGGAGATGGTTGATTACCTTATAGGTTACATAAAAGATAATGGTCGATTACCTGTAAATATCAAAAGAATTGTCTGGAAGTTATTTGATTTTCTATGAGTTGCTGGTATTATTTTGTCCCTTGATCTTTACTAAACTAATAGTGTTGCACTATCAGCCACTTCCAGAAACTGTGTCACTTGTTGAAGACATCGTGGTGGATTATGTCACTGATATGGTGAGTTGAACTTACTACTATACAGTGCTATTCTTTCGAAGAGGTTTCAGAATATACATCTTCCAGATAAAACTTTGCATTCTACACAATTTATTTTCTTCAGTATTTGATTTAGAAGAAACATGCATATGGTCCTATCTTTTAAGCTCTTCAACTTGGGTAGGTGCACAAAGCTCAGGATATTGCAACCAAAAGGGGGAAGCTTTTGACCGAGGACTTTCTGTTCTTAATTAGAAAGGTCAGTCTTTTTGTGAATTCAACATGCATATATATAATATATATGCATATCTGAATCTGCAGCATTATGGCGAATATTTAGTTGAAAAATGTCCGTCTCATTTTCGCTCAATGAGTGGTCTTGAGAGTTTTCTATATTATTTCATTTAAGAACATTAAGGGAACTATTAGACCAGCCTATTAGTGGAACAAAGTCATATACAAGTGTCCGGATAGCCAAGTGTAGTTGGACAGAAGCTGAGATTTGTAGTTTTGCTCATCTCAAGCTTAATTACTACTTTAAGGTTTTATTTGTTGCTATTATTTTGGCTTACCTCATGCGTGTTAGTACTGCTATCACACTGAATAATTGGTTTCATTATGATAGATCGTAGTTTAGTTCATGTATCACCATTATAGAATTGTATCTGAAAATAGTTTCAATGGTAATTTCATGTTTGTTTGTGCCTGATAAACCTGAAACTCTTCTGGGACTAGTTTGATGTCTCCATGCCAACGAGAAATGCCAATAATAGTTAGCTTCTTACTATGTTGATCATTAAAACAACAAATTACTCCATCTTTTGGTTGGGTAGAATTACGCTGGGAGATTGTTGCGTCGCCTTCACCTTCCATCTATTTAGTGCCACGTGCCTCTTCTATTGTGCTGCTTACTGGTTTCTCTTGCTGTGATTTGAATATATTTCAACACGTCTTTAGTTGTCAAAAAGAGTATGGATGGTTGTTCTGAAAAATCAGTCCTGCTTTGCTACCTCTACAAACTGGATTATGGTGTTACTGCAAATTTTGCTTTATGAGCTTCTAAATTTTGGATGGATACTGTTCTATTGTGCAGGACTTGCCGAAACTTAACCGGTGTACAGAACTGTTGTCCATGAATGAGGAGCTGAAACAAGCTCGGAAGGCTTTCGAGGTCGATGAAGAGAAATTGGCTTCACATCAGTGAAGGGGAAGTGTGATCTTAGTTCAGAATGACAAATTGAGTGGCACCGTAGGACCAGTATACAGTTTAACCTACTCTGGAGTAAATAGCCTGCTTGTTCTCATTTTTCGCTAGCACAATCGATGTCTGAGTCACCTTGTAGCTGCGTTTACTCTTGCACAATAGATCTTCGATGCTGAAATCAGTTTCTTAAGTGTTCTATTGGTGCATTGAACGCCACCTGTGTGTAGTTTGGCAGTTCTAAAGATGGTGGTGTCAGGTATTTATAATTTCATCAATCTACTTG</genome_strand>
        <mrna_strand>GAAATTTGAGCGGATGTCCCCTTATACCCTAATAATTTTGGAATTTTAATTTGAAATTCTGTTTACAATTGTGCTCTCGTCATCTCCAGTGGAATCAACACTTTTGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGAGGTGGACGTTAAAATAAATTGAAAATGAACAACTCTTCTGCAGGGCCATCCTCAAAAGCTAGAGTAGGAGCATCACAACCTTCAGAAAGTTCACTTAAGAGGAAACGTGGCATGTTTCAGAAAGATT........................................................................................TGCAACACATGATGTATGGTTTTGGAGATGATAGCAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTTCCAGAAACTGTGTCACTTGTTGAAGACATCGTGGTGGATTATGTCACTGATATG...................................................................................................................................................................GTGCACAAAGCTCAGGATATTGCAACCAAAAGGGGGAAGCTTTTGACCGAGGACTTTCTGTTCTTAATTAGAAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGCCGAAACTTAACCGGTGTACAGAACTGTTGTCCATGAATGAGGAGCTGAAACAAGCTCGGAAGGCTTTCGAGGTCGATGAAGAGAAATTGGCTTCACATCAGTGAAGGGGAAGTGTGATCTTAGTTCAGAATGACAAATTGAGTGGCACCGTAGGACCAGTATACAGTTTAACCTACTCTGGAGTAAATAGCCTGCTTGTTCTCATTTTTCGCTAGCACAATCGATGTCTGAGTCACCTTGTAGCTGCGTTTACTCTTGCACAATAGATCTTCGATGCTGAAATCAGTTTCTTAAGTGTTCTATTGGTGCATTGAACGCCACCTGTGTGTAGTTGGGCAGTTCTAAAGATGGTGGTGTCAGGTATTTATAATTTCATCAATCTACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604169" ref_strand="+" ref_description="SGN-U604169 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gaattggtggcagtacccacagaccagatgtgggactttcaatcatcaggagatagaaactgtcattttcagctgcagatacatcttcacgactttcaatcatcaggtgggaagtcctcatctgaggcattatccagaaatgaaccaagagtttttctcagaaaactgaatgctttatcatcctgtcaagcaaaaaaggaggacggttaacttggcggtatgagaatgtatgcagtgtgtgacagagataaggtgcatcaaagaagttaacctgcttctttttcttcagcgactcctttagttcagaaattcgttttctagagtcttgctcaagatcagatatcatgctcttctctttcttccctgaattaatgtcataaaaatctgtcacaggcatccttatcattcaataaatatataatacagagttcctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="-" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="85381" stop="84351"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85078" g_stop="84651" g_length="428"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="435" r_length="428" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="-" ref_id="SGN-U604169" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>428</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U604169" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85078" e_stop="84651"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCAGTACCCACAGACCAGATGTGGGACTTTCAATCATCAGGAGATAGAAACTGTCATTTTCAGCTGCAGATACATCTTCACGACTTTCAATCATCAGGTGGGAAGTCCTCATCTGAGGCATTATCCAGAAATGAACCAAGAGTTTTTCTCAGAAAACTGAATGCTTTATCATCCTGTCAAGCAAAAAAGGAGGACGGTTAACTTGGCGGTATGAGAATGTATGCAGTGTGTGACAGAGATAAGGTGCATCAAAGAAGTTAACCTGCTTCTTTTTCTTCAGCGACTCCTTTAGTTCAGAAATTCGTTTTCTAGAGTCTTGCTCAAGATCAGATATCATGCTCTTCTCTTTCTTCCCTGAATTAATGTCATAAAAATCTGTCACAGGCATCCTTATCATTCAATAAATATATAATACAGAGTTCCTGT</genome_strand>
        <mrna_strand>TGGCAGTACCCACAGACCAGATGTGGGACTTTCAATCATCAGGAGATAGAAACTGTCATTTTCAGCTGCAGATACATCTTCACGACTTTCAATCATCAGGTGGGAAGTCCTCATCTGAGGCATTATCCAGAAATGAACCAAGAGTTTTTCTCAGAAAACTGAATGCTTTATCATCCTGTCAAGCAAAAAAGGAGGACGGTTAACTTGGCGGTATGAGAATGTATGCAGTGTGTGACAGAGATAAGGTGCATCAAAGAAGTTAACCTGCTTCTTTTTCTTCAGCGACTCCTTTAGTTCAGAAATTCGTTTTCTAGAGTCTTGCTCAAGATCAGATATCATGCTCTTCTCTTTCTTCCCTGAATTAATGTCATAAAAATCTGTCACAGGCATCCTTATCATTCAATAAATATATAATACAGAGTTCCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U586710" ref_strand="+" ref_description="SGN-U586710 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|195623128|gb|ACG33394.1| (e_value=3e-18) transcription; (*ATH) AT1G02680.1 (e_value=1e-18)  Symbol: None | transcription initiation factor IID (TFIID) 18 kDa subunit (TAFII-18) family protein, similar to transcription factor TFIID (SP:Q15543) (Homo sapiens); contains Pfam PF02269: Transcription initiation factor IID, 18kD subunit | chr1:58... ; ">
      <seq>aataattttggaatttcaatttgaaattctgtttacaattgtgctctcgtcatctccagtggaatcaacacttttgcaggttgagaggtggacgttaaaataaattgaaaatgaacaactcttctgcagggccatcctcaaaagctagagtaggagcatcacaaccttcagaaagttcacttaagaggaaacgtggcatgtttcagaaagatttgcaacacatgatgtatggttttggagatgatagcaatccacttccagaaactgtgtcacttgttgaagacatcgtggtggatgatgtcactgatatgactatctctccagaagaagatacaatggagaaaatactagctatgatgacaaacctttgtcaaaaggtggagaagatagaaaacgaagtacaagtattaatagaaacatttaaaaaccagcagcatgacggagctagaaggtgacgttgggaaacacctaaaaacccataacaaaacaatatatacagctgcaggaagcacatctacaggaagcacatatgcaggaggaacatctacaaaaaaagaaggtgcacaaagctcaggatattgcatccaaaagggggaagcttttgaccgaggactttctgttcttaattagaaaggacttgccgaaacttaaccagtgtacagaactgttgtccatgaatgaggagctgaaacaagctcggaaggctttcgaggtcgataaagagaaattggcttcacatcagtgaaggggaagtgtgatctcagttcagaatgacaaattgagtggcaccgtaggaccagtatacagtttacctcctctggagtaaatagcctgcttgttctcatttttcgctagcacaatcgatgtctgagtcaccttgtagctgcgtttagtcttgcacaatagatcctcgatgctgaaatcagtttcttaagtgttctattggtgcattgaacgccacctgtgtgtagtttgacagttctaaagatggtggtgtcaggtatttataatttcatcaatctacttgtttgtagatctgcacaaactgatggaatgagttgtaagttaactctgagtagtcatctaattagattgattttgatctgtttgctatgcaaaagatggaagatcttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="+" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="88653" stop="100213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88953" g_stop="89031" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89032" i_stop="89665" i_length="634">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89666" g_stop="89799" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="213" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89800" i_stop="89887" i_length="88">
            <donor d_prob="0.461" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89888" g_stop="89925" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="251" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89926" i_stop="90713" i_length="788">
            <donor d_prob="0.952" d_score="0.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90714" g_stop="90773" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="311" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="90774" i_stop="96926" i_length="6153">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="96927" g_stop="97174" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="559" r_length="248" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="97175" i_stop="98495" i_length="1321">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98496" g_stop="98570" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="560" r_stop="634" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="98571" i_stop="99412" i_length="842">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="99413" g_stop="99913" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="635" r_stop="1135" r_length="501" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="+" ref_id="SGN-U586710" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1135</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U586710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88953" e_stop="89031"/>
          <exon e_start="89666" e_stop="89799"/>
          <exon e_start="89888" e_stop="89925"/>
          <exon e_start="90714" e_stop="90773"/>
          <exon e_start="96927" e_stop="97174"/>
          <exon e_start="98496" e_stop="98570"/>
          <exon e_start="99413" e_stop="99913"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAATTTTGGAATTTCAATTTGAAATTCTGTTTACAATTGTGCTCTCGTCATCTCCAGTGGAATCAACACTTTTGCAGGTTTCTCTTCGGAATTCTTTTTCTCTTTTACGATCCTAATTGTGATTGTGACTGCAGAAATTATAATTAATGTTTTATGTGCTCTTGCATTTTCTTCCTTTTCTTCAATACATTGGCACTCCTGGTCTCCTGGATGTTGATTGTTTGATAACTGTGTTATTATTATTATTTTTGTTGTTGATCGATATGCCCAATTCGCGTCTGTCCCACCTTGGATTTTGTATAACAAAGCTTCAGTAATGGCTTCCACACAATGTACATATAGAAAAAAAATAGATTTAACTTTTAATCTTTCATGAATTCTATTATTTGATGATCATTTACAGTAAAAGAACTTTTTTCCAGTTATATATGGGTTGTGTATATATTGGGTGCTTATTTTGGGAGCTGCATAGAAGAATGCATGTTCCATCTTTACCATGAGCTTCCTTTTTTATAGAACCGGAAAATTTTGAGCTAATTGTGTAGGTGGTTAAGTGGTGATAACCATTATAAGAACTATGGAAGTGCATTCTTTGTGCGTTCAGTTTTCTATTTTCTTTTCAATGGTACTTGCGTGATGTATCTGTCAGATAATTATATATAATACGTTTGATTGATGGTATTTGCTAAGGATGGTATGACACTTTGGCAGGTTGAGAGGTGGACGTTAAAATAAATTGAAAATGAACAACTCTTCTGCAGGGCCATCCTCAAAAGCTAGAGTAGGAGCATCACAACCTTCAGAAAGTTCACTTAAGAGGAAACGTGGCATGTTTCAGAAAGATTGTTAGTGACTCTTTATGTAGATGTGATAATAATGTTAAATCACTTCATCTTGTATTATTTATTAATATTTCTTTTATTTATTACACAGTGCAACACATGATGTATGGTTTTGGAGATGATAGCAATGTAAGATGCCTCTTTGTTTCACTTTTTATCTCTTCATTGTTTTTCATCTGCGTATGTCCATGGTGTTTATACGCGTTGATTGTTGTGTGTATGGCAATACAGTGAATTATGTCATGCTGCTGTCACCTAGCTTTTCTTTTCTCTGTACAAACATTTATAGTGGGAAAAGTTGCAGCTTGTATAGAACAGATTGAATATGGCCTTCGCTTGTTGCTTAATGTTTAACAAAAATCACTCACCGGCTATGGGAAATACTTTTAGTTTCTTTGATGATTGTTCTAAGCTTGTGTCTAGGATCTAGCAATAATGTCTAAAGGGACTTTTGGGAGGACCAAGGACCTGTGCTGATTCTAAGGAAAGAACAGAAACTCAGTATTGGAGTTTTGTAATGATGTTGTCTAGTTGTCTTTTAAAAGGAATAATCTTTGTTGCTGGAGTACAGTCCTTTTTCTTGTTTTACCACATCTTGCTTTCCCTGTTGCACAAGGGAATAGAGCGCGGTCATAATGCATTAGTGACTCCATCATAAAACAGAGATAATTTTGCTGGAAGATCTTCTTATTGATATGTTCCCTTTGGCAGCTGTATGTTTATTTTTTCTAATTTAGTAAACTAATACTGGACTTGGAGATGGTTGATTGCCTTATAGGTTATATAAAAGATGATGGTTGATTACTTGTAAATATCAAAAGAATTGTCTGGAAGTTGTACTGATTTTGATTTTCTATGAGTTGCTGGTATTATTTTGTCCCTTGATCTTTACTAAACTAATAGTGTTGCACTATCAGCCACTTCCAGAAACTGTGTCACTTGTTGAAGACATCGTGGTGGATGATGTCACTGATATGGTGAGTTGAACTTACTACTATCCAGTGCTATTCTTTCGAAGAGGTTTCAGAATATACATGTTCCAGATAAAGCTTTGCATTCTACGCAATTTATTTTCTTCAGTATTTGATTTCGATAAACATGCATATGGTCCTATCTTTTGAGCTCTTCAACTTGGGTATAATAACCATCTTTAGAAAGTTTGCTACGGAAATATTCTGCGAATAGGTATGCCCAGACTATGCCATCCTAAAGTTGAAATCGATAGGCAAGAAGGCCGGTTAGGGGAGTAAACAAAGTTGAGGCGCTATTAGGGTAACTGATCAAAGAAGAAAACCGTAGTAGTGACCAGACGAGATGATTATTAAATCATTATTATTACATAATAAATAAGTATAATCTATTAAGAGGTTAGAAGGAATAAAATTTTAGCGAAAATATGATAAAATGAAATCCTATTTATTAGAAGATGATGTTAATTACAAGATATTAATACTTTATATATTAAAAAGTCTTAATACCGATACAAAAAGAGAAATTTATGAAAAATTATTGATGTATGAGATAATAAAAGAAACAACCCAAGATTTTGGTATAGACTTATATGATGATATAGAATTATTTATAGAACAATGATAAATTATTTATACTTACAATTCTGGAAAGAAACTAAAGAAGGAATAGAAGTACTTGAAAAACTACTAGTTGAAATTTTTTACAAATATTTGAGAACTAGAGAAAGTGAATATTTAGAATATATTACAAACAACGTTAATGAAATACAAAGATTAGATCTACTTAAAAAAAAATATTATGAAAAAATATTTTACTCTTAAAACTATGAAGAATAATCAAACATCAAATAAAGCTACTATAACAAAAACTAAAATAGAAAGAAAGGTACGAAAGACACAGAAAAAGTTAAAAACCTTATATATAAAATATGAATTATTACAACTTTCTAAAACAAATAATAGTAAAACAAATCTTTTGATAGATATAATTTCTAAAACAAAATATAAGTATGTTCGTTACCTGAAAAAACAATATGAACAAAGAAACATAGAAACAACAACTGATAGAGAAGATAATTGAAAAATAGAAAAGAATTACAACACAGGAAAGAAAGATTAGAAGAAAATATGTTAGCAGGAGTATGTAATAAATCAATATTAGCACAAAGAAAAGTTATATTTATGCTAGAAATACAAATAGATTGCCTAGAATACAAATTACAACATGATATAAGCTATAACACGAACCATAATGAATAAAGAAGAATTTGCAGTAGACCAAAAGACATATGAAAATCAAGATGGCTTAGTAATAAAAATAATATTTTTCAAATTTAGGAAGACGATATAAAAAATAGGAAATAACTTATATTTAATGTTAGAAAAAGAAACAACAAAATTAGAAAATAGTTTGACAGCTATGGTAAGAATAACAAAGGAAAATGAAGAAATAGATAAATCAAAAGAAATTGAAAAAATAAAAGCAAAGCAAGAAGTACAACATCTAGAAGAAATAAAAAATACAAGAATAAGTGAATTAGAAAAAGAATTAGCTAAGCTAAAATTATTATATGAAACCAAACAAAAAGAGAAACAGGTAGAAAAAGATAAAGAACTTGAATTAACTAATGAGATAAATAAGATGAAACAAAAATTAAATGAAAATCTTGAAATAGACGAAATAAATGAATCAGATACAATAAACTATCAAAACTTAGAAATAAGTGATATAAGTGAAACATACACAGAAATTCTAGAACAAGTAAATAAGCCGAAAAAATTAGAAATAAATACAGGAGATATAAATCAACCCAGCACATCAAGAGTTAAAACCCAGATAATAGTCCTAGAAGTAGTCCTAAATGGACAACACCAACTTATTATACAGAGAATTATGAACGATCAGATTAAACAAATGCAATATGGAATAGCGGGTTAAATAAAAAATGGACGCCTAGATCAATAACTGAACAATATAACTTTTTAGATCTAGATTGTGTTACAGATATAAATAAAGCAATATTACTATGGGTTAGAAATATATCTAAACAATTAATTGATAACAAAATAACAACAAAAGAAACACCAGGATATATAGAAAGAACATTTGTTGGAACAACAAAATTATGGATAGGAAATTTACCCCAGAAAGTCGAGAAACACTTAGAAGTGACAAGAAAATAGATGGATCTCCATCAACAACAAATATAGATATACTAGATAAATACGAATTAGCAATACGGAATAAATTTGGAGGTATGACCACAGAAATAAAAGAACAAAATAGAGAAAAAACAATAAATAGACAACTTATGACAAAATTAGCTATATGTAAAATGTGTTATATAGAAGAATACACATGCGCATTCAAAGAATATTATTACAAAGCAAGATATGGTATAAATGAAGCAAAAGAAATAAGACAACAATATTTTACAAAACTACCAGAACCATTTAGTACAAAAATAATTAAAGACTGGAACAATGAAGGATTAACAGATACTTTAGGAGCTAGAATAAGATTTTTACATCAATGGTTTGTAGAATTATGCGAAAACCAAAAAGAAAAAATAAAAATGGAAAAAGTACTAATTAAAAATCTAGCCTGTTGTAAAATAAAACAGCACCACAATTTGGATGTACAAATAAATATTATAAAAAACAAAGACCTAAACGACACAAAAATTATAGAAAAACCAAAACTAGATATAAATACAAAAAACCAAGACAAAAATATTATGCAAAAAATTATAAAACAAAAAGACCGTATAGACCAAAGAGAAAACTATCAGAATGTACTTGTTATAACTGCGGAAAGATAGGACATTTAGCTAGAGATTGTAAGTTACCTAAAACTCCAAAAGGAAAACAAATTGCAGAATTAATTATAGATAAGAGGAATACATGCAAATAGAATATATAAACTATGAACTAAGTGAAAACGATAGTATATATGAAGTATCAGATATAGAAACTGAAAATGAAGAAGAAAATATTGATCTAGAAAATGATGTAATGAACGAAGAAATCTAATGTCTGAAGACGACATAAAAATAATATCTAAAGAAGACTATCAAAATGAAGAATTATCAGAACAAAAAATTATATTTGATAATACAATTTTTGAACAAATAAAAGGAAAAGAATTAGATTTAAGTGTTGAAAAAATACTTGAAATACCTACCTTAAGGAATTGGTTTAAAAGACAAAAAGATGAATATTATATAGTTAGCCAGAAAGAACACATCATAGATTGCAAATATACAAAAGGAAAGGCACAAATACCTATACTAAATAAGAGGATAATTAATAAAGAAATACAAGATATAAAAGCTAAAACACCCATAAAATACGTACATTTAGGAGGAACAGAAATATTGATAAAAGCATGTGTTAGAGAAGGAATAGACACACTTATTGAAATATACTTAGCAGATGATAGAATTATACACCCTATAGAAAAAAGTGTAATAAGTGCAGTAAGAGGAAATTTAATATACCAAAAATTTAAATTTATAATAAGTGCCAACTACTTAGTAGCATTAACATATAGAAATATAGATAAATCATTAGTTCTATATTGGAAAATGTCTGAAATAGAATTAGCACCAGGAAGTAAAATATTTACAGCAAGATGTAAGAACCTATATATACTAACAACAAAACATAAAGTAACAGCAAGAAATAAAAAATTGATAGAATAAAGGTAGAAAATCCTTTTGAAAAAATAATTACCATAATAGACAACAATGACTATAGCTATAAAGAAATAGACATAGAAGAAGATTTAGAAATTGTAAAAGAAAGATTAAGCACTTCAAGTGTACCAAATACATTAACGAGAGCTACATCATCAAGAATGAGCACATCTAAAAGAAATTATGAAATCTCACAAAATTTATTAGATAAAGAAGAGATAACACCATACCATTACTTTATAACAGGGATAATAGACCAAAGAAGATATAAAATTTTGATAAATACAGGACAAGAAGAGAATTATATAACGAGAGAATTAGTATTAGAAACAGAAATTATAGAAACAAGACACTTATGCCCCGGATTACCTAGTGAAATAGTAAACACAAACGAAGAGATGACAGAAAAAGAAATAATTATAGGAGGAATACCCTTGATAATACCATTTAAAATCTACCAAGGAAACCAAAATATTACCTTAGGAATAAAATGGTTAGAAAAAGTTAAACCATATAATATAGAAAATGAACAATTAACAATAACTTGCCAAAATAAGAAGATAATTATCAAAAGAACAAATGAATAATGAAAATTTATATACTTGCAAAAATTACTGTAGAAGGATACCACAACAGATATTATACCCCTATGATAGATACAGGAGCAGAAGCGAATATATGTAAATATAATTGTTTACCAGAAGATAAATGGGAAAAATTAAAAACACCTATGGTGGTAACAGGATTTAATAATGAAGGAAGTATGATTGCATATAAAGCAAAAAATATAAAAATACAAATATGGGATAAAATACTAACAATAGAAGAAATGTACAATTTTGAATTTACAACAAAAGGTATGTTATTAGAATGTCATTTCTAGAAAGATTTTATCCACATATTATAACAAAAACACATTGGTGGTTTACTACACCATGCGGAAATAAGATAAGAGCAAAAAGAGTAAATAATAAACAACGTAAACCTATAGAATGGATAAAAAGAAGTGAAAAGATAAACCAAGAAATGGAAAATATAAATAAAAATCAAACAACACAATTAGAAATTATCATATTTACAATAGATAAAGTTAAAATAATTAACGAACAACTAGAATTATTATATATTGAAAATCCATTACAAGGATGGGAAAAGCATAAGATGAAAGTAAAAATTGAATTAATAGATGAAAATAGTATAATAACACAAAAACCATTATAATATAATTTTGATGATTTAAAGAATTCAAAATACATATAAATGAACTATTGAAGAATAATTATATACAAGAAAGCAATAGTAAACATACAAGTCCAGCATTTATAGTTAATAAACATAGTGAACAAAAACGAGGTAGAAGTAGAATGGTTATAGATTATCGCAACCTGAATGCTAAAACTAAAACATATAACTACCCAATACCAAATAAGATACTAAAAATAAGACAGATACAAGGATATAACTATTTCAGTAAATTTGATTGTAAATCAGGATTTTATCACTTAAAATTAGACGAAGAATCTAAACAGCTAACAACATTTACTGTACCACAAGGATTTTATGAGTGGAATGTTCTACCATTTGGATATAAAAATGCACCAGGTAGATTCCAACATTTTATGGACAATTATTTTAATCAATTAGAAAATTGCATTGTTTATATAGATGATATATTATTATATTCAAAAACACAAGATGAACATATTAGATTATTAGAAAAATTTATACATATAATTAAACATTCTGGTATAAGCTTAAGTAAAAAGAAAGCATAAATTATGAAACCACGAATAGAATTTCTAGGAATACAAATAGATAAAAATGGAATAAAAATGCAAACACATATAGTACAAAAAATTGTTAATAGTGATGAAAATATAGATACAAAAAAGAAATTACAATCATTTTTAGGAATAGTAAATCAGGTAAGAGAATACATACCAAAATTAGCAGAATACCTAAAACCATTACATAAAAAAACTTAGGAAAGATGTTGAATATTATTTTGATAATAAAGATAAAGATCATATAAGACGTATCAAGAATTTATGCAAAAAATTACCAAAACTATATTTTCCGGATGAAGAAAAATGATTTATATATATATTAGAAACAGACTCAAGTAATTATAGTTATGGAGGAGTTTTAAAGTACAAATATGATAATGAACAAACTGAACATCATTGTAGATATTACTCAGGATCATATACAGAAGCACAATTAAAATGGGAAATAAACAGAAAAGAGTTATTTGCATTATATAAATGTTTATTAGCGTTTGAACCATATATAGTTTACAATGAATTTATTGTGAGAACAAATAATGCACAAGTTAAATGGTGGATTACTGGAAAATTACAAGATTCAGTTACAACTAAAGAAATAAGAAGATTGGTATTAAATATACTAAATTTTACAGTTACAATTGAAGTAATTAAGACTGATAAAATTTTTATTGCAGACTATCTCTCCAGAAGAAGATACAATGGAGAAAATACTAGCTATGATGACAAACCTTTGTCAAAAGGTGGAGAAGATAGAAAACGAAGTACAAGTATTAATAGAAACATTTAAAAACCAGCAGCATGACGGAGCTAGAAGGTGACGTTGGGAAACACCTAAAAACCCATAACAAAACAATATATACAGCTGCAGGAAGCACATCTACAGGAAGCACATATGCAGGAGGAACATCTACAAAAAAAGAAGGTAAGATGAAATATACAAACACAAATGAACAAACTATTCTCTAAACCATACTCTCCACAAAATACCCAAAAAGATATGTTCGTACCCCACAAATAAATACTTACAAAGCCAGTCTAGATTCACAAAAACAAACATATAATCACATTAACAGAATGTATATAGAAAATATATACAAGATACAAACTTTTCTAAACCTAAACCCTAGAGCAAAAGATACCAAAAATCCAAACGAAAATTTTATATCACCCAATACCTACAAGGATACAACAAACTAATAGCACAACCAGGAACAAATCCAAATCTAGTAGCAACTTGCTACAATTACGGGCTAATAAGCACAGTATATACTATAACTGGAGACGAAGTAGCTAAAATACCTGAGCTACATGAGGCATTTCTGCAATATAAAAGAATAACTAAAGGAACTTTATTTTATATAAAGTTCTACTCAGCAACAGCAGAAATACTATATGAAGAAATTAAACCTACAATACAAGTTATTAAGATAGATTTAACTAGAGATATGATAATACTAGAAAAAATAGATATACAAGAAGAGATACAGAAGGTGGATATCCCAGATTTTTATGCAAACAAAAGAACTATTGGGATAGCTACCATATTAAATGAGTTATCAAACACTACCTAAATGAAAATGCAATTTGGAGTTATTACAACAGAGATCAAACAATGATATACTCCAATTGTAGAGATATAAGAGCAGCAGATATGGAAGAAGTACGACAATGGATATTAAGTCTGCTGAAGCCAGAACAAACACCTACAACAAGAGCTATCAGGAAAAAATTCATTTCTCCAAACTTGATGACCAGATACTGCAAACTAATTGGACAAAAGTATTCAGATCATCTATGTACAAAATGCGACGGAGAAGATAACTATATTCCTGAAGTCCAGCTAGAATGAAGACATATGTAAAGTATGAATAGTAGTGTCTGTAAAGTATGAATAGTAGTGTCGGCCATATTTAAAAAAGCAAAGGCCAGTATATAAAGAAGTAAAGTTGTAAATAGTATGTCGGCCATATAAAAAATAAAGGCCAATTATGTGTGAAAGTATTTTGTTTTCTTGTGTCGGCCGAATATAAATAGGCCAGGTGTAAAGTGTTGTATGTAAAGGAGTGTCGGCCATTTGGCCAAAGTGTTGAGTTTTCTTGTATAAATAGAGGGCTTTCCCTCATAATAAAATCATCCCTTTCCTCTATATCTCTCTCTCACTCTACGCAATTTATTTTCTTCAGTATTTGATTTAGAAGAAACATGCATATGGTCCTATCTTTTGAGCTCTTCAACTTGGGTAGGTGCACAAAGCTCAGGATATTGCATCCAAAAGGGGGAAGCTTTTGACCGAGGACTTTCTGTTCTTAATTAGAAAGGTCAGTCTTTTTGTGAATTCAACATGCATATATATAATATATATGCATATCTGAATCTGCAGCATTATGGCGAATATTTAGTTGAAAAATGTCCATCCCATTTTCGCTCAATGAGATGGTCTTGAGAGTTTTCTATATTATTTCAATTAAGAACATTAAGGAAACTATTAGACCTGCCTTTTAGTGGAACAAAGTCATATACAAGTGTCCGGATAGCCAAGTGTAGTTGGACAGAAGCTGAGATTTGTAGTTTTGCTCATCTCAAGCTTAATTACTACTTTAAGGTTCTATTTGTTGCTATTATTTTGGCTTACCTCATGCGTGTTAGTACTGCTATCACACTGAATAATTGGTTTCATTATGATAGATCGTAGTTTAGCTCATGTATCACCATTATAGAATTGTATCTGAAAATAGTTCCAATGGTAATTTCATGTTTGTTTGTGCCTGATAAACCTGAAACTCTTTCGGGACTAGTTTGATGTCTCCATGCCAACGAAAAATGTCAAGAATAGTTAGCTTCTTACTTTGTTGATCATTAAAACAAAAAATTACTTCATCTTACTCCATCTTTTGGTTGGGTAGAATTAGGCTGGGAGATTGAGGCGTTGCCTTCGCCTTCTATCTATTTAGTGCCACGTGCCTCTTCTATTGTGCTGCTTACTGGTTTCTCTTGCTGTGATTTGAATATTTCAACACGTCTTTAGTTGTCAAAAAGAGTATGGATGGTTGTTCTGAAAAATCAGTCCTGCTTTGCTACCTCTACAAACTGGATATGGCGTTACTGCAAATTTTGCTTTATGAGCTTCTAAATTTTGGATGGATACTGTTCTATTGTGCAGGACTTGCCGAAACTTAACCAGTGTACAGAACTGTTGTCCATGAATGAGGAGCTGAAACAAGCTCGGAAGGCTTTCGAGGTCGATAAAGAGAAATTGGCTTCACATCAGTGAAGGGGAAGTGTGATCTCAGTTCAGAATGACAAATTGAGTGGCACCGTAGGACCAGTATACAGTTTACCTCCTCTGGAGTAAATAGCCTGCTTGTTCTCATTTTTCGCTAGCACAATCGATGTCTGAGTCACCTTGTAGCTGCGTTTAGTCTTGCACAATAGATCCTCGATGCTGAAATCAGTTTCTTAAGTGTTCTATTGGTGCATTGAACGCCACCTGTGTGTAGTTTGACAGTTCTAAAGATGGTGGTGTCAGGTATTTATAATTTCATCAATCTACTTGTTTGTAGATCTGCACAAACTGATGGAATGAGTTGTAAGTTAACTCTGAGTAGTCATCTAATTAGATTGATTTTGATCTGTTTGCTATGCAAAAGATGGAAGATCTTGA</genome_strand>
        <mrna_strand>AATAATTTTGGAATTTCAATTTGAAATTCTGTTTACAATTGTGCTCTCGTCATCTCCAGTGGAATCAACACTTTTGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGAGGTGGACGTTAAAATAAATTGAAAATGAACAACTCTTCTGCAGGGCCATCCTCAAAAGCTAGAGTAGGAGCATCACAACCTTCAGAAAGTTCACTTAAGAGGAAACGTGGCATGTTTCAGAAAGATT........................................................................................TGCAACACATGATGTATGGTTTTGGAGATGATAGCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTTCCAGAAACTGTGTCACTTGTTGAAGACATCGTGGTGGATGATGTCACTGATATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTATCTCTCCAGAAGAAGATACAATGGAGAAAATACTAGCTATGATGACAAACCTTTGTCAAAAGGTGGAGAAGATAGAAAACGAAGTACAAGTATTAATAGAAACATTTAAAAACCAGCAGCATGACGGAGCTAGAAGGTGACGTTGGGAAACACCTAAAAACCCATAACAAAACAATATATACAGCTGCAGGAAGCACATCTACAGGAAGCACATATGCAGGAGGAACATCTACAAAAAAAGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCACAAAGCTCAGGATATTGCATCCAAAAGGGGGAAGCTTTTGACCGAGGACTTTCTGTTCTTAATTAGAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTGCCGAAACTTAACCAGTGTACAGAACTGTTGTCCATGAATGAGGAGCTGAAACAAGCTCGGAAGGCTTTCGAGGTCGATAAAGAGAAATTGGCTTCACATCAGTGAAGGGGAAGTGTGATCTCAGTTCAGAATGACAAATTGAGTGGCACCGTAGGACCAGTATACAGTTTACCTCCTCTGGAGTAAATAGCCTGCTTGTTCTCATTTTTCGCTAGCACAATCGATGTCTGAGTCACCTTGTAGCTGCGTTTAGTCTTGCACAATAGATCCTCGATGCTGAAATCAGTTTCTTAAGTGTTCTATTGGTGCATTGAACGCCACCTGTGTGTAGTTTGACAGTTCTAAAGATGGTGGTGTCAGGTATTTATAATTTCATCAATCTACTTGTTTGTAGATCTGCACAAACTGATGGAATGAGTTGTAAGTTAACTCTGAGTAGTCATCTAATTAGATTGATTTTGATCTGTTTGCTATGCAAAAGATGGAAGATCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U572408" ref_strand="+" ref_description="SGN-U572408 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|82754279|gb|ABB89938.1| (e_value=8e-58) putative; ">
      <seq>gcaggaagcacatctacaggaagcacatatgcaggaggaacatctacaaaaaaagaaggtaagatgaaatatacaaacacaaatgaacaaactattctctaaaccatactctccacaaaatacccaaaaagatatgttcgtaccccacaaataaatacttacaaagccagtctagattcacaaaaacaaacatataatcacattaacagaatgtatatagaaaatatatacaagatacaaacttttctaaacctaaaccctagagcaaaagataccaaaaatccaaacgaaaattttatatcacccaatacctacaaggatacaacaaactaatagcacaaccaggaacaaatccaaatctagtagcaacttgctacaattacgggctaataagcacagtatatactataactggagacgaagtagctaaaatacctgagctacatgaggcatttctgcaatataaaagaataactaaaggaactttattttatataaagttctactcagcaacagcagaaatactatatgaagaaattaaacctacaatacaagttattaagatagatttaactagagatatgataatactagaaaaaatagatatacaagaagagatacagaaggtggatatcccagatttttatgcaaacaaaagaactattgggatagctaccatattaaatgagttatcaaacactacctaaatgaaaatgcaatttggagttattacaacagagatcaaacaatgatatactccaattgtagagatataagagcagcagatatggaagaagtacgacaatggatattaagtctgctgaagccagaacaaacacctacaacaagagctatcaggaaaaaattcatttctccaaacttgatgaccagatactgcaaactaattggacaaaagtattcagatcatctatgtacaaaatgcgacggagaagataactatattcctgaagtccagctagaatgaagacatatgtaaagtatgaatagtagtgtctgtaaagtatgaatagtagtgtcggccatatttaaaaaagcaaaggccagtatataaagaagtaaagttgtaaatagtatgtcggccatataaaaaataaaggccaattatgtgtgaaagtattttgttttcttgtgtcggccgaatataaataggccaggtgtaaagtgttgtatgtaaaggagtgtcggccatttggccaaagtgttgagttttcttgtataaatagagggctttccctcataataaaatcatccaattcctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="+" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="96817" stop="98697"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97117" g_stop="98397" g_length="1281"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1281" r_length="1281" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="+" ref_id="SGN-U572408" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1281</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U572408" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97117" e_stop="98397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGGAAGCACATCTACAGGAAGCACATATGCAGGAGGAACATCTACAAAAAAAGAAGGTAAGATGAAATATACAAACACAAATGAACAAACTATTCTCTAAACCATACTCTCCACAAAATACCCAAAAAGATATGTTCGTACCCCACAAATAAATACTTACAAAGCCAGTCTAGATTCACAAAAACAAACATATAATCACATTAACAGAATGTATATAGAAAATATATACAAGATACAAACTTTTCTAAACCTAAACCCTAGAGCAAAAGATACCAAAAATCCAAACGAAAATTTTATATCACCCAATACCTACAAGGATACAACAAACTAATAGCACAACCAGGAACAAATCCAAATCTAGTAGCAACTTGCTACAATTACGGGCTAATAAGCACAGTATATACTATAACTGGAGACGAAGTAGCTAAAATACCTGAGCTACATGAGGCATTTCTGCAATATAAAAGAATAACTAAAGGAACTTTATTTTATATAAAGTTCTACTCAGCAACAGCAGAAATACTATATGAAGAAATTAAACCTACAATACAAGTTATTAAGATAGATTTAACTAGAGATATGATAATACTAGAAAAAATAGATATACAAGAAGAGATACAGAAGGTGGATATCCCAGATTTTTATGCAAACAAAAGAACTATTGGGATAGCTACCATATTAAATGAGTTATCAAACACTACCTAAATGAAAATGCAATTTGGAGTTATTACAACAGAGATCAAACAATGATATACTCCAATTGTAGAGATATAAGAGCAGCAGATATGGAAGAAGTACGACAATGGATATTAAGTCTGCTGAAGCCAGAACAAACACCTACAACAAGAGCTATCAGGAAAAAATTCATTTCTCCAAACTTGATGACCAGATACTGCAAACTAATTGGACAAAAGTATTCAGATCATCTATGTACAAAATGCGACGGAGAAGATAACTATATTCCTGAAGTCCAGCTAGAATGAAGACATATGTAAAGTATGAATAGTAGTGTCTGTAAAGTATGAATAGTAGTGTCGGCCATATTTAAAAAAGCAAAGGCCAGTATATAAAGAAGTAAAGTTGTAAATAGTATGTCGGCCATATAAAAAATAAAGGCCAATTATGTGTGAAAGTATTTTGTTTTCTTGTGTCGGCCGAATATAAATAGGCCAGGTGTAAAGTGTTGTATGTAAAGGAGTGTCGGCCATTTGGCCAAAGTGTTGAGTTTTCTTGTATAAATAGAGGGCTTTCCCTCATAATAAAATCATCCCTTTCCTCT</genome_strand>
        <mrna_strand>GCAGGAAGCACATCTACAGGAAGCACATATGCAGGAGGAACATCTACAAAAAAAGAAGGTAAGATGAAATATACAAACACAAATGAACAAACTATTCTCTAAACCATACTCTCCACAAAATACCCAAAAAGATATGTTCGTACCCCACAAATAAATACTTACAAAGCCAGTCTAGATTCACAAAAACAAACATATAATCACATTAACAGAATGTATATAGAAAATATATACAAGATACAAACTTTTCTAAACCTAAACCCTAGAGCAAAAGATACCAAAAATCCAAACGAAAATTTTATATCACCCAATACCTACAAGGATACAACAAACTAATAGCACAACCAGGAACAAATCCAAATCTAGTAGCAACTTGCTACAATTACGGGCTAATAAGCACAGTATATACTATAACTGGAGACGAAGTAGCTAAAATACCTGAGCTACATGAGGCATTTCTGCAATATAAAAGAATAACTAAAGGAACTTTATTTTATATAAAGTTCTACTCAGCAACAGCAGAAATACTATATGAAGAAATTAAACCTACAATACAAGTTATTAAGATAGATTTAACTAGAGATATGATAATACTAGAAAAAATAGATATACAAGAAGAGATACAGAAGGTGGATATCCCAGATTTTTATGCAAACAAAAGAACTATTGGGATAGCTACCATATTAAATGAGTTATCAAACACTACCTAAATGAAAATGCAATTTGGAGTTATTACAACAGAGATCAAACAATGATATACTCCAATTGTAGAGATATAAGAGCAGCAGATATGGAAGAAGTACGACAATGGATATTAAGTCTGCTGAAGCCAGAACAAACACCTACAACAAGAGCTATCAGGAAAAAATTCATTTCTCCAAACTTGATGACCAGATACTGCAAACTAATTGGACAAAAGTATTCAGATCATCTATGTACAAAATGCGACGGAGAAGATAACTATATTCCTGAAGTCCAGCTAGAATGAAGACATATGTAAAGTATGAATAGTAGTGTCTGTAAAGTATGAATAGTAGTGTCGGCCATATTTAAAAAAGCAAAGGCCAGTATATAAAGAAGTAAAGTTGTAAATAGTATGTCGGCCATATAAAAAATAAAGGCCAATTATGTGTGAAAGTATTTTGTTTTCTTGTGTCGGCCGAATATAAATAGGCCAGGTGTAAAGTGTTGTATGTAAAGGAGTGTCGGCCATTTGGCCAAAGTGTTGAGTTTTCTTGTATAAATAGAGGGCTTTCCCTCATAATAAAATCATCCAATTCCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U601436" ref_strand="+" ref_description="SGN-U601436 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>accttcaaaataaatagaaaattttcattgtgcaatattagaagtaataagacatggagatatcattgcaaaattaaggagtgcaatgaagtcctcagtcctcactcttataaattgcatactgattaaccggtttcctgagctcgatgaggcgaaactaaactaccaaaactagtgtcaccaacatccagacacggtaaagattgtcacagatttctgatacggtaaagattttacaaatccaagggaaatgccaaagccatgaagcaagcagtaacctgatgtcaactaactagcccagaagtttcatataaacaatgcatctacatgatggattcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="+" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="104575" stop="105513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104875" g_stop="105213" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="339" r_length="339" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="+" ref_id="SGN-U601436" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>339</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U601436" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104875" e_stop="105213"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTTCAAAATAAATAGAAAATTTTCATTGTGCAATATTAGAAGTAATAAGACATGGAGATATCATTGCAAAATTAAGGAGTGCAATGAAGTCCTCAGTCCTCACTCTTATAAATTGCATACTGATTAACCGGTTTCCTGAGCTCGATGAGGCGAAACTAAACTACCAAAACTAGTGTCACCAACATCCAGACACGGTAAAGATTGTCACAGATTTCTGATACGGTAAAGATTTTACAAATCCAAGGGAAATGCCAAAGCCATGAAGCAAGCAGTAACCTGATGTCAACTAACTAGCCCAGAAGTTTCATATAAACAATGCATCTACATGATGGATTCC</genome_strand>
        <mrna_strand>ACCTTCAAAATAAATAGAAAATTTTCATTGTGCAATATTAGAAGTAATAAGACATGGAGATATCATTGCAAAATTAAGGAGTGCAATGAAGTCCTCAGTCCTCACTCTTATAAATTGCATACTGATTAACCGGTTTCCTGAGCTCGATGAGGCGAAACTAAACTACCAAAACTAGTGTCACCAACATCCAGACACGGTAAAGATTGTCACAGATTTCTGATACGGTAAAGATTTTACAAATCCAAGGGAAATGCCAAAGCCATGAAGCAAGCAGTAACCTGATGTCAACTAACTAGCCCAGAAGTTTCATATAAACAATGCATCTACATGATGGATTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U568402" ref_strand="+" ref_description="SGN-U568402 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157333036|emb|CAO16040.1| (e_value=5e-11) unnamed; ">
      <seq>ttttcggtggacattttgggggatactgacaaaactattcaccaatcagaaatggatatgggtcgcaaacaagaaggcacaaagaatgaggaggaaaggcccccaagtgaaaagcaaccaatgtcgcatttagtacagatgaaacctatagtacctcaagcctcatcacatgctgcaacagtttcttccggtcagttcttttcacagagcataacagacttttagttcatctcatccaatttagtcagtttatttaggagatgctttgaacaaaatacattatgtaattaagttatgatgcagaactgggtcagatggtatgtggtggttgccaacagttactttcttattcacaaggggctaaattggtgaagtgttcatgctgccagaccgtcaatcttgtgctagaaggtttctgcttcctcttttatactaaaatggattcttacactccttgtcattttccccttgtcacaaaatcagatatattctagtgatgatatttcaatttatcattggtaggttggtaggttgcccccatatataagttttgttgaatcttgacacgtgccaaaattgctgaaaagataacgtataaaataacttctaattgacagtatgaacagttagttttctccatgccttttattcagggatccgctttttggtaaatcggagccctgttatcaatatgtttaagtacgttaggaacaactgatgtaaaataaccgtgtggtgcagcttcattctgatttttccttctgatactgtaagttctgtatctattgtgaactggcataccagaccactcatacttggatagagaggaaataaataggaaacagacatttgcttcactttcttgttttcatggatctgtacaactatcctggagaatttgatggttgaagaccatcgactcatttctatggggggctcactcacgtggttctgattgttctcactgcagctcatgaggttggacaagttaagtgtgggggttgtgcagtgctgctcatgtatccgtatggggcgccatcagttagatgttcatcttgtcgtcacatgacaaaaatttgggtatggacttcatttcttcagaaatacttgtgcagtcatgtcaattaatcatatgacatttttttatggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="-" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="107066" stop="105319"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106766" g_stop="105618" g_length="1149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1150" r_length="1150" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="-" ref_id="SGN-U568402" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1149</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U568402" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106766" e_stop="105618"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCGGTGGACATTTTGGGGGATACTGACAAAACTATTCACCAATCAGAAATGGATATGGGTCGCAAACAAGAAGGCACAAAGAATGAGGAGGAAAGGCCCCCAAGTGAAAAGCAACCAATGTCGCATTTAGTACAGATGAAACCTATAGTACCTCAAGCCTCATCACATGCTGCAACAGTTTCTTCCGGTCAGTTCTTTTCACAGAGCATAACAGACTTTTAGTTCATCTCATCCAATTTAGTCAGTTTATTTAGGAGATGCTTTGAACAAAATACATTATGTAATTAAGTTATGATGCAGAACTGGGTCAGATGGTATGTGGTGGTTGCCAACAGTTACTTTCTTATTCACAAGGGGCTAAATTGGTGAAGTGTTCATGCTGCCAGACCGTCAATCTTGTGCTAGAAGGTTTCTGCTTCCTCTTTTATACTAAAATGGATTCTTACACTCCTTGTCATTTTCCCCTTGTCACAAAATCAGATATATTCTAGTGATGATATTTCAATTTATCATTGGTAGGTTGGTAGGTTGCCCCCATATATAAGTTTTGTTGAATCTTGACACGTGCCAAAATTGCTGAAAAGATAACGTATAAAATAACTTCTAATTGACAGTATGAACAGTTAGTTTTCTCCATGCTTTTTATTCAGGGATCCGC-TTTTGGTAAATCGGAGCCCTGTTATCAATATGTTTAAGTACGTTAGGAACAACTGATGTAAAATAACCGTGTGGTGCAGCTTCATTCTGATTTTTCCTTCTGATACTGTAAGTTCTGTATCTATTGTGAACTGGCATACCAGACCACTCATACTTGGATAGAGAGGAAATAAATAGGAAACAGACATTTGCTTCACTTTCTTGTTTTCATGGATCTGTACAACTATCCTGGAGAATTTGATGGTTGAAGACCATCGACTCATTTCTATGGGGGGCTCACTCACGTGGTTCTGATTGTTCTCACTGCAGCTCATGAGGTTGGACAAGTTAAGTGTGGGGGTTGTGCAGTGCTGCTCATGTATCCGTATGGGGCGCCATCAGTTAGATGTTCATCTTGTCGTCACATGACAAAAATTTGGGTATGGACTTCATTTCTTCAGAAATACTTGTGCAGTCATGTCAATTAATCATATGACATTTTTTTTTGGG</genome_strand>
        <mrna_strand>TTTTCGGTGGACATTTTGGGGGATACTGACAAAACTATTCACCAATCAGAAATGGATATGGGTCGCAAACAAGAAGGCACAAAGAATGAGGAGGAAAGGCCCCCAAGTGAAAAGCAACCAATGTCGCATTTAGTACAGATGAAACCTATAGTACCTCAAGCCTCATCACATGCTGCAACAGTTTCTTCCGGTCAGTTCTTTTCACAGAGCATAACAGACTTTTAGTTCATCTCATCCAATTTAGTCAGTTTATTTAGGAGATGCTTTGAACAAAATACATTATGTAATTAAGTTATGATGCAGAACTGGGTCAGATGGTATGTGGTGGTTGCCAACAGTTACTTTCTTATTCACAAGGGGCTAAATTGGTGAAGTGTTCATGCTGCCAGACCGTCAATCTTGTGCTAGAAGGTTTCTGCTTCCTCTTTTATACTAAAATGGATTCTTACACTCCTTGTCATTTTCCCCTTGTCACAAAATCAGATATATTCTAGTGATGATATTTCAATTTATCATTGGTAGGTTGGTAGGTTGCCCCCATATATAAGTTTTGTTGAATCTTGACACGTGCCAAAATTGCTGAAAAGATAACGTATAAAATAACTTCTAATTGACAGTATGAACAGTTAGTTTTCTCCATGCCTTTTATTCAGGGATCCGCTTTTTGGTAAATCGGAGCCCTGTTATCAATATGTTTAAGTACGTTAGGAACAACTGATGTAAAATAACCGTGTGGTGCAGCTTCATTCTGATTTTTCCTTCTGATACTGTAAGTTCTGTATCTATTGTGAACTGGCATACCAGACCACTCATACTTGGATAGAGAGGAAATAAATAGGAAACAGACATTTGCTTCACTTTCTTGTTTTCATGGATCTGTACAACTATCCTGGAGAATTTGATGGTTGAAGACCATCGACTCATTTCTATGGGGGGCTCACTCACGTGGTTCTGATTGTTCTCACTGCAGCTCATGAGGTTGGACAAGTTAAGTGTGGGGGTTGTGCAGTGCTGCTCATGTATCCGTATGGGGCGCCATCAGTTAGATGTTCATCTTGTCGTCACATGACAAAAATTTGGGTATGGACTTCATTTCTTCAGAAATACTTGTGCAGTCATGTCAATTAATCATATGACATTTTTTTATGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604426" ref_strand="+" ref_description="SGN-U604426 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gtgtaagagcaaaaaaaaaaaatggaaaaaaagttgacccacatcgaaaatcaccaattaaatgatgatgaaaaaaaaaatgagggtcccccgcctggtttcaactctttagctgtaccatcgcaaaacaccaatgtcttcataaatgaaaatgatgatgaaggaccccctccaggttggccatcaattcctcagcaacacaacctccaaactactgatgtaaaaatggggagcaaaaaacacaaatcggaaaatgatgaagatggtccgccacctggggggaacactgtaatctcacaaaaaaaatcgccattttcaccgccaaccctaaaagcagttatttgtgatatagaaatggaaaaaaaagaagaaatctttaaaaatgaaaataatggcccaccgccaatatggcagttgacccctaaactgccagcgctacaaacatctacaccaccatcttggacacaaggagcttctcttgaaaatataaaaatggaaaaaaaagaggaagccgttgaaaatgaaaataatggtccaccgccaggatggcaattgacccctcaactactgcctctacagacttctacaccaccatcagggatacaaggagcccctcttgctgacgttgaaatggcaagcaaccaggactgtgatgttgaaaaggaaggacatccactgggatcgcctacaccaccactgcagtcgtcatcaccggttgcttcttctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0005F12-Sm7Pi/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0005F12.1" temp_strand="-" temp_description="C02SLe0005F12.1  AC226513.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0005F12 sequenced_by:kribb upload_account_name:korea">
        <position start="111038" stop="106628"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110739" g_stop="110530" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="210" r_length="210" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110529" i_stop="109998" i_length="532">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.976" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="109997" g_stop="109862" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="346" r_length="136" r_score="0.941"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="109861" i_stop="108842" i_length="1020">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.986" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="108841" g_stop="108704" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="484" r_length="138" r_score="0.942"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="108703" i_stop="108109" i_length="595">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.539" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="108108" g_stop="107971" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="622" r_length="138" r_score="0.949"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107970" i_stop="107033" i_length="938">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.911" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="107032" g_stop="106928" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="623" r_stop="727" r_length="105" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0005F12.1" gen_strand="-" ref_id="SGN-U604426" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>727</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0005F12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U604426" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110739" e_stop="110530"/>
          <exon e_start="109997" e_stop="109862"/>
          <exon e_start="108841" e_stop="108704"/>
          <exon e_start="108108" e_stop="107971"/>
          <exon e_start="107032" e_stop="106928"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTAAGAGCAAAAAAAAAAAATGGAAGAAAAGTTGAGCCACATCGAAAATCAGCAATTAGATGATGATGAAGAAGAAGATGAGGGTCCACCGCCTGGTTTCGACTCTTTAGCTGTACCATCGCAAAACACCAATGTCGTCATAGATGAAGATGATGATGAAGGACCACCTCCAGGTTGGCCATCAATTCCTCAGCAACACAACCTCCAGGTGAGATTAATCATAAAACACTAAAATGGGTGTCAATTTAATTTTGTTTTTTCTCTTGAGAGTTACTTGTTTTGGGTTGATGAAATTCATCTTTAGAACTGTTCCCTTTAAGTTAATGTATGATTGATGCATGTAGAGAAGTACATTCATCTGTCAAAAGATGGGAAATTAGTGAAAAATTGAAAATCTTGATGCCATATGAGTACTTGTCAATCATGAAAATCATGAAAAGAACATTAAGATTTTCCTAAAAGTTATGTGATTAATTTTGTGGGAATTTTATTTGAAGACTCTATATAGTTGAACTTGATCTTTATTGGCTTTCATGGATTACCTGTTTTGTGCTGGTGAATTTGATTGCTCTCAAGAGTTGGAACTTTCATGAATTTGAGGCGATAGCAGTATATATAACTATCATTAAAACATTGAAAGGGAAAAAAGAAGAAGAGGAAATAGTTAATGAATAAGTATTTTGCGTAGTGAAAACAGAACTATTAGATTCTACATATACACAAAGGTAACTTGTGAACAGACTACTGATGTAGAGATGGGGAGCAAAGAACACAAATCGGAAGATGATGAAGATGGTCCGCCACCTGGGTGGAACACTGTAATCTCACAGAAAAAATCGCCATCTTCACCGCCAACCCTAGAAGCAGTTATTTGTGGTAAGTCGTTAACTTTACTGTTAAATTACTTTCTTCCCTGCCCCCTCTCTTGCTAGCTCCCTCTCTTTTCTCCCTTGCACACAAACAACTTAGGTAAAAGCATTAGAATTGCTTTTAAATCGAATTGTCAGCTCCACTAGATTAATGCCTCTATTATTTTCTTGGTAAACAAATCTGTAAAAGATAGTGGCCGGCCTTCTTTCAGATCTATGCTAGATTGGTTCTTGAAACTTAACTCTTCAAATTACGGGTAGATGTAATTTTGGAAGGCAATGAACATGAACCATGTGGAAACATTAAGACTGTTGGTGATGCCTTTTTACAATTTTCTTCTTTTCTTTTGTTGCATCTTTTAAAGAGATAATCATTTTGAAATGCTTAACTTGAGCCGAGAGTCTATCTGAAGTAACCTCTCCATCTCCTAAGGTTGGTTAAAGGTCTTTGTGACATCACCCTCCCTAGACCCCACTTCTGGGATTACACTGCGTATGTTGTTGTTGTTTTAAAGAGATAATCACGTGGGACCACTATTTGGTTCTTGTAACTTCATTCTTACTGACCACCATTTTATGTAGCTTCTTTTGCACTTGTGTGCTTGTTGGTTGTCACATTTGCTATGATGTTACTTAACTATATACTGATAGTGTTTTTCCTTGCGTATTTGTTTTCAAAAGAAAATTAGTATAAGCTTACAGCTTACTATAATAGACATTACCAGTTTTTTTTTAAAAAATAGTATAAGCTTACTATAATATACTCTTTTTGGTTCTTATGTAATGTCTCTTAAAGGTTTGCAATTCACTAGCTTATTCTTGCCAAACAATTGATTTAGCCAATTAGAAGTATTACTATGCAGGGCTTATGGTCCCACATCAGTATCTTATGTATTTAGGATGCTCTTATATGAATGAGCTTAGATGACTTTTGCATCTAGTTGTTGAGCAAGATTATGAGGAACTTGGGGATGGATGAGTCTTCTTTATTTGTTTGGTTCATAAGATCTAACATTCTTACTTTCAGATATAGAAATGGAGAAGAAAGAAGAAATCATTAAAAATGAAGATAATGGTCCACCGCCGATATGGCAGTTGACCCCTAAACTGCCAGCGCTACAAACATCTACACCACCATCATGGACACAAGGAGCTTCTCTTGAAGGTGAGTCCTTTCCTATTCACTCAGATGAGTATCCATGTTCACAAGTGCAATTTTTATTTTCTTTGGCTTTGGTATATGCTAAAATACACTAATCTCTTGTACTTGCCATTTGTACATGCATACTTGTGCTTTTCGTTTTCTCTGAATTAGTCCACAACACCAATCGGGCTTCGTTTATGTGACATACCTGTAAGTTCATATTTATTGATCAGTATGGTATGAGAGATGACATGCCCCAATGTCTTTGTGTTGATTGAAACTGCAGGTGGATGTGATTGAAGGTGGGCCAAACTGAGAAGCAATTAATTCCATAGAACATGTCGAAAATACAAGTGATGAATTATTATATCCAAGATAAGAGAATAATCAAGAAATAATAAAAGCTAATATTTGCCAAATGATTAATATAATCAATTGAAAGTAATTCTATGCTAGGCTTGTGATAGCATTAGTATCTTCTGTGTTATGGATGCCCTCATGTGTGGTTAGATGTTGGCTTCATCTAGTTGTCACTTGTCCAGTAAGATTATGAGGAATTTGGGGATGCGTGAGTTCTTTATATTTGGTTCATCAGAATTAGCATTCTGACTTTCAGATATAGAAATGGAGAAGAAAGAGGAAGCCGTTGAAGATGAAGATAATGGTCCACCGCCAGGATGGCAATTGACCCCTCAACTACTGCCTCTACAGACATCTACACCACCATCAGGGATACAAGGAGCGCCTCTTGCTGGTGAGTCCTTTTTTTACTCAGATTCGAAATGTCCGTGGTTACAAGTTCAATTGGTATGTGCTAAAATACACTAGTCTCAATTACTTGCCATATGGACTCAAGCTTGTGTTTTTCTGATATAGTTAGCAATCGGGCCTCGTTTATGTAACAGACCTTCAGTGTAAGATCATGCTTGTTGATCAATATGGTAAGAGAGGTGGATCTGACCCTGTGTCTTTGTATTGATTGAAACTGCAGGTGGGATGTGATTTAGTAAGGAGGCCAAACTGAGAAGAAATTAATTTCATTGAACATGTAAAAATGACTAGTGATGAAGTATATTGAAATATGAAAATAATCAGTGGACAATACAAGCAACAGTGTGGCTCAATCCCAACTAGTAGGGTCGTCTATACGAGTCCTCCATATCCATTCTGCTCTATATGGGCTCGGTTTCATTCCAATACTCAATTATTGTCTACTAAGACAAATTAGGGGTGAATATGTGGAAAAAGTTCTAGCTGTGGTATGGCCAAAATTTATAAGCATAAAGCATGAGAGGTTCTCATTAAGTAAACAAAGTTTTTAAGAAAAATATCTAGGGGTTCATAGCTTAAAGGCTTGTGGGTCTGTAAAAGTTCAGATTAGCGGTATCAAAATTTGACATTTGGTTTCTTTGGAGCCAACCTTCGACTATTTCTGCCTTCTAACCTTAACCTATGAGTTAGCAATTTGACTCAATTGCCCGAGTCCCGATGTTTCAAACATATATACAAGTTTGCCATATAGTTTTTTTGTTCCGATGTTGTGCATGTAGATAGCAAAGTGGCTAGCAGCTGCTGATATGTCAATTCCATACAAGAAATTATATCTGGGTTTGGTGCTAAATTTGCAGTGGACAAATTCTATTTATTCAGTATCCTTAAAGTTTTGTAACTAGCTAACATTAGCTTTTGTAGACGTTGAAATGGCGAGCAACCAGGACTGTGATGTTGAAAAGGAAGGACATCCACTGGGATCGCCTACACCACCACTGCAGTCGTCATCACCGGTTGCTTCTTCTG</genome_strand>
        <mrna_strand>GTGTAAGAGCAAAAAAAAAAAATGGAAAAAAAGTTGACCCACATCGAAAATCACCAATTAAATGATGATGAAAAAAAAAATGAGGGTCCCCCGCCTGGTTTCAACTCTTTAGCTGTACCATCGCAAAACACCAATGTCTTCATAAATGAAAATGATGATGAAGGACCCCCTCCAGGTTGGCCATCAATTCCTCAGCAACACAACCTCCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACTGATGTAAAAATGGGGAGCAAAAAACACAAATCGGAAAATGATGAAGATGGTCCGCCACCTGGGGGGAACACTGTAATCTCACAAAAAAAATCGCCATTTTCACCGCCAACCCTAAAAGCAGTTATTTGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAGAAATGGAAAAAAAAGAAGAAATCTTTAAAAATGAAAATAATGGCCCACCGCCAATATGGCAGTTGACCCCTAAACTGCCAGCGCTACAAACATCTACACCACCATCTTGGACACAAGGAGCTTCTCTTGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAAAAATGGAAAAAAAAGAGGAAGCCGTTGAAAATGAAAATAATGGTCCACCGCCAGGATGGCAATTGACCCCTCAACTACTGCCTCTACAGACTTCTACACCACCATCAGGGATACAAGGAGCCCCTCTTGCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTTGAAATGGCAAGCAACCAGGACTGTGATGTTGAAAAGGAAGGACATCCACTGGGATCGCCTACACCACCACTGCAGTCGTCATCACCGGTTGCTTCTTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>21</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="5005" PGL_stop="3142"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5005" e_stop="4606"/>
            <exon e_start="4513" e_stop="4414"/>
            <exon e_start="4297" e_stop="4217"/>
            <exon e_start="3871" e_stop="3767"/>
            <exon e_start="3675" e_stop="3142"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.000" e_score="0.998"/>
          <exon-intron don_prob="0.990" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.957" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.354" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="5005" e_stop="4606" e_length="400"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="4605" i_stop="4514" i_length="92"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4513" e_stop="4414" e_length="100"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.000">
            <gDNA_intron_boundary i_start="4413" i_stop="4298" i_length="116"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="4297" e_stop="4217" e_length="81"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.957">
            <gDNA_intron_boundary i_start="4216" i_stop="3872" i_length="345"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="3871" e_stop="3767" e_length="105"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.354">
            <gDNA_intron_boundary i_start="3766" i_stop="3676" i_length="91"/>
          </intron>
          <exon e_serial="5" e_score="0.993">
            <gDNA_exon_boundary e_start="3675" e_stop="3142" e_length="534"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5005" stop="4606"/>
              <exon start="4513" stop="4414"/>
              <exon start="4297" stop="4217"/>
              <exon start="3871" stop="3767"/>
              <exon start="3675" stop="3142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569469" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTTGGAAATTTCTTCTGAGCCTATCTGGGGAAATTTTTGCATATCTAGGCATGTCACCATCACTATTATTTCTTTTAAAAAAATCAACAATCTAAACAGTTATAAATCACATCAATATGCTTTCTAATGAACTCTTCCAAGCACCCTTAAAAACATAACAACAATTTACCTAGCAAGTGCTCTTCTATTTCCCCTCCTAAGTGAATGAAACAGCTCCTGTTTAAAATTCAAGATGGTAAAACTTGTAAAGAGTTACCTGCGATTATCCCTCAAGATCACAAACATAACAATAGGATTTATGGGCATTGCAATGCTCATCTATGGTGTATGGATGATCAGAGTTTGGCAGCGCGATGCTGCCAACTCACCCTCATCCCCTGATTATGCTCAATTTCCTTG : GTTTATCCATGCATTTCTTGGTGTTGGCACTGCTTTGTGTGCAATCACTTTCCTTGGTCATGTTGCAGCAAGCACTGCCAATTCCTATTGCCTCTCATTT : TATATGTTCTTCATATTTGTGCTTCTTTTAGCAGAGATTGCAATTACAGCTGATGTTTTCTTGAACTCTGATTGGGAGAAG : GATTTGCCTGAAGATCCATCAGGAAGGTTTGATGATTTCAAGGATTTTGTGGACTCGAATAGCGATGTCTGCCAATGGATTACCCTGCTTTGTGTTCTAACACAG : GGATGTTGTATCTTATTGGCTACAATTCTAAGAACTCTTGGGCAAGTTAAGGAAAATAGTCATGAGTATGAAGGTGAATATGCAGAACCATCAGCTCCACTTCTTCGCCCTCCGCAACTGCCTCCAAATCCTCTGTATCCATATGTTATTGGTGAACCAGTTCATATTGAACCACATTCTGCCTACAAGAATGTTTGAGTTTTGGAAGACAATTGGTTTGATCCCTTTGTAAAACTATGAAATCTTGAAACCTCTCTTTTTGGCTTATTATGTTATTGAAGTCTGCAGAAGTTGAAGTGAATGAAGTTATCCTTTATGGAAAAATATGCTATGTAGCTTCTCCAATTGCTTAAGAATGAGCTTTGTTAATCAGAAACAGATGAGACCATTTTATGTATAATTAAGATTGTGAGTTTTGCAACTTTTATGTTTTTGAGTGGTATCATTTTTGTTTATTACAATGAACAATGATATTACATTGTTTATGCATGTTGAACTTCTTTGGACTTCTTCATATATTAAACTCTCCTAATG</gDNA_template>
            <first_frame> S  W  K  F  L  L  S  L  S  G  E  I  F  A  Y  L  G  M  S  P  S  L  L  F  L  L  K  K  S  T  I  *  T  V  I  N  H  I  N  M  L  S  N  E  L  F  Q  A  P  L  K  T  *  Q  Q  F  T  *  Q  V  L  F  Y  F  P  S  *  V  N  E  T  A  P  V  *  N  S  R  W  *  N  L  *  R  V  T  C  D  Y  P  S  R  S  Q  T  *  Q  *  D  L  W  A  L  Q  C  S  S  M  V  Y  G  *  S  E  F  G  S  A  M  L  P  T  H  P  H  P  L  I  M  L  N  F  L   : G  L  S  M  H  F  L  V  L  A  L  L  C  V  Q  S  L  S  L  V  M  L  Q  Q  A  L  P  I  P  I  A  S  H  F :   I  C  S  S  Y  L  C  F  F  *  Q  R  L  Q  L  Q  L  M  F  S  *  T  L  I  G  R  R :   I  C  L  K  I  H  Q  E  G  L  M  I  S  R  I  L  W  T  R  I  A  M  S  A  N  G  L  P  C  F  V  F  *  H  R :   D  V  V  S  Y  W  L  Q  F  *  E  L  L  G  K  L  R  K  I  V  M  S  M  K  V  N  M  Q  N  H  Q  L  H  F  F  A  L  R  N  C  L  Q  I  L  C  I  H  M  L  L  V  N  Q  F  I  L  N  H  I  L  P  T  R  M  F  E  F  W  K  T  I  G  L  I  P  L  *  N  Y  E  I  L  K  P  L  F  L  A  Y  Y  V  I  E  V  C  R  S  *  S  E  *  S  Y  P  L  W  K  N  M  L  C  S  F  S  N  C  L  R  M  S  F  V  N  Q  K  Q  M  R  P  F  Y  V  *  L  R  L  *  V  L  Q  L  L  C  F  *  V  V  S  F  L  F  I  T  M  N  N  D  I  T  L  F  M  H  V  E  L  L  W  T  S  S  Y  I  K  L  S  *   </first_frame>
            <second_frame>  L  G  N  F  F  *  A  Y  L  G  K  F  L  H  I  *  A  C  H  H  H  Y  Y  F  F  *  K  N  Q  Q  S  K  Q  L  *  I  T  S  I  C  F  L  M  N  S  S  K  H  P  *  K  H  N  N  N  L  P  S  K  C  S  S  I  S  P  P  K  *  M  K  Q  L  L  F  K  I  Q  D  G  K  T  C  K  E  L  P  A  I  I  P  Q  D  H  K  H  N  N  R  I  Y  G  H  C  N  A  H  L  W  C  M  D  D  Q  S  L  A  A  R  C  C  Q  L  T  L  I  P  *  L  C  S  I  S  L  :  V  Y  P  C  I  S  W  C  W  H  C  F  V  C  N  H  F  P  W  S  C  C  S  K  H  C  Q  F  L  L  P  L  I   : L  Y  V  L  H  I  C  A  S  F  S  R  D  C  N  Y  S  *  C  F  L  E  L  *  L  G  E   : G  F  A  *  R  S  I  R  K  V  *  *  F  Q  G  F  C  G  L  E  *  R  C  L  P  M  D  Y  P  A  L  C  S  N  T   : G  M  L  Y  L  I  G  Y  N  S  K  N  S  W  A  S  *  G  K  *  S  *  V  *  R  *  I  C  R  T  I  S  S  T  S  S  P  S  A  T  A  S  K  S  S  V  S  I  C  Y  W  *  T  S  S  Y  *  T  T  F  C  L  Q  E  C  L  S  F  G  R  Q  L  V  *  S  L  C  K  T  M  K  S  *  N  L  S  F  W  L  I  M  L  L  K  S  A  E  V  E  V  N  E  V  I  L  Y  G  K  I  C  Y  V  A  S  P  I  A  *  E  *  A  L  L  I  R  N  R  *  D  H  F  M  Y  N  *  D  C  E  F  C  N  F  Y  V  F  E  W  Y  H  F  C  L  L  Q  *  T  M  I  L  H  C  L  C  M  L  N  F  F  G  L  L  H  I  L  N  S  P  N  </second_frame>
            <third_frame>   L  E  I  S  S  E  P  I  W  G  N  F  C  I  S  R  H  V  T  I  T  I  I  S  F  K  K  I  N  N  L  N  S  Y  K  S  H  Q  Y  A  F  *  *  T  L  P  S  T  L  K  N  I  T  T  I  Y  L  A  S  A  L  L  F  P  L  L  S  E  *  N  S  S  C  L  K  F  K  M  V  K  L  V  K  S  Y  L  R  L  S  L  K  I  T  N  I  T  I  G  F  M  G  I  A  M  L  I  Y  G  V  W  M  I  R  V  W  Q  R  D  A  A  N  S  P  S  S  P  D  Y  A  Q  F  P  W :   F  I  H  A  F  L  G  V  G  T  A  L  C  A  I  T  F  L  G  H  V  A  A  S  T  A  N  S  Y  C  L  S  F  :  Y  M  F  F  I  F  V  L  L  L  A  E  I  A  I  T  A  D  V  F  L  N  S  D  W  E  K  :  D  L  P  E  D  P  S  G  R  F  D  D  F  K  D  F  V  D  S  N  S  D  V  C  Q  W  I  T  L  L  C  V  L  T  Q  :  G  C  C  I  L  L  A  T  I  L  R  T  L  G  Q  V  K  E  N  S  H  E  Y  E  G  E  Y  A  E  P  S  A  P  L  L  R  P  P  Q  L  P  P  N  P  L  Y  P  Y  V  I  G  E  P  V  H  I  E  P  H  S  A  Y  K  N  V  *  V  L  E  D  N  W  F  D  P  F  V  K  L  *  N  L  E  T  S  L  F  G  L  L  C  Y  *  S  L  Q  K  L  K  *  M  K  L  S  F  M  E  K  Y  A  M  *  L  L  Q  L  L  K  N  E  L  C  *  S  E  T  D  E  T  I  L  C  I  I  K  I  V  S  F  A  T  F  M  F  L  S  G  I  I  F  V  Y  Y  N  E  Q  *  Y  Y  I  V  Y  A  C  *  T  S  L  D  F  F  I  Y  *  T  L  L  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4796" stop="4606"/>
                    <exon start="4513" stop="4414"/>
                    <exon start="4297" stop="4217"/>
                    <exon start="3871" stop="3767"/>
                    <exon start="3675" stop="3478"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>672</number_coding_nucleotides>
                  <number_encoded_amino_acids>224</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSSCLKFKMVKLVKSYLRLSLKITNITIGFMGIAMLIYGVWMIRVWQRDAANSPSSPDYAQFPWFIHAFLGVGTALCAITFLGHVAASTANSYCLSFYMFFIFVLLLAEIAITADVFLNSDWEKDLPEDPSGRFDDFKDFVDSNSDVCQWITLLCVLTQGCCILLATILRTLGQVKENSHEYEGEYAEPSAPLLRPPQLPPNPLYPYVIGEPVHIEPHSAYKNV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="11925" PGL_stop="5303"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="11925" e_stop="11707"/>
            <exon e_start="11234" e_stop="11067"/>
            <exon e_start="10400" e_stop="10332"/>
            <exon e_start="9763" e_stop="9670"/>
            <exon e_start="9501" e_stop="9401"/>
            <exon e_start="9269" e_stop="9221"/>
            <exon e_start="9142" e_stop="9083"/>
            <exon e_start="8406" e_stop="8338"/>
            <exon e_start="8026" e_stop="7943"/>
            <exon e_start="7847" e_stop="7764"/>
            <exon e_start="7424" e_stop="7339"/>
            <exon e_start="6990" e_stop="6900"/>
            <exon e_start="6144" e_stop="6064"/>
            <exon e_start="5812" e_stop="5738"/>
            <exon e_start="5642" e_stop="5303"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.972" acc_prob="0.933" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.802" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.833" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.434" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.787" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.954" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.704" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.697" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="11925" e_stop="11707" e_length="219"/>
          </exon>
          <intron i_serial="1" don_prob="0.972" acc_prob="0.933">
            <gDNA_intron_boundary i_start="11706" i_stop="11235" i_length="472"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="11234" e_stop="11067" e_length="168"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.968">
            <gDNA_intron_boundary i_start="11066" i_stop="10401" i_length="666"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="10400" e_stop="10332" e_length="69"/>
          </exon>
          <intron i_serial="3" don_prob="0.970" acc_prob="0.970">
            <gDNA_intron_boundary i_start="10331" i_stop="9764" i_length="568"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="9763" e_stop="9670" e_length="94"/>
          </exon>
          <intron i_serial="4" don_prob="0.964" acc_prob="0.802">
            <gDNA_intron_boundary i_start="9669" i_stop="9502" i_length="168"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="9501" e_stop="9401" e_length="101"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="0.833">
            <gDNA_intron_boundary i_start="9400" i_stop="9270" i_length="131"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="9269" e_stop="9221" e_length="49"/>
          </exon>
          <intron i_serial="6" don_prob="0.967" acc_prob="0.993">
            <gDNA_intron_boundary i_start="9220" i_stop="9143" i_length="78"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="9142" e_stop="9083" e_length="60"/>
          </exon>
          <intron i_serial="7" don_prob="0.991" acc_prob="1.000">
            <gDNA_intron_boundary i_start="9082" i_stop="8407" i_length="676"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="8406" e_stop="8338" e_length="69"/>
          </exon>
          <intron i_serial="8" don_prob="0.954" acc_prob="0.980">
            <gDNA_intron_boundary i_start="8337" i_stop="8027" i_length="311"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="8026" e_stop="7943" e_length="84"/>
          </exon>
          <intron i_serial="9" don_prob="0.434" acc_prob="0.998">
            <gDNA_intron_boundary i_start="7942" i_stop="7848" i_length="95"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="7847" e_stop="7764" e_length="84"/>
          </exon>
          <intron i_serial="10" don_prob="0.787" acc_prob="0.000">
            <gDNA_intron_boundary i_start="7763" i_stop="7425" i_length="339"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="7424" e_stop="7339" e_length="86"/>
          </exon>
          <intron i_serial="11" don_prob="0.987" acc_prob="0.954">
            <gDNA_intron_boundary i_start="7338" i_stop="6991" i_length="348"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="6990" e_stop="6900" e_length="91"/>
          </exon>
          <intron i_serial="12" don_prob="1.000" acc_prob="0.980">
            <gDNA_intron_boundary i_start="6899" i_stop="6145" i_length="755"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="6144" e_stop="6064" e_length="81"/>
          </exon>
          <intron i_serial="13" don_prob="0.704" acc_prob="0.966">
            <gDNA_intron_boundary i_start="6063" i_stop="5813" i_length="251"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="5812" e_stop="5738" e_length="75"/>
          </exon>
          <intron i_serial="14" don_prob="0.697" acc_prob="0.998">
            <gDNA_intron_boundary i_start="5737" i_stop="5643" i_length="95"/>
          </intron>
          <exon e_serial="15" e_score="0.994">
            <gDNA_exon_boundary e_start="5642" e_stop="5303" e_length="340"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11925" stop="11707"/>
              <exon start="11234" stop="11067"/>
              <exon start="10400" stop="10332"/>
              <exon start="9763" stop="9670"/>
              <exon start="9501" stop="9401"/>
              <exon start="9269" stop="9221"/>
              <exon start="9142" stop="9083"/>
              <exon start="8406" stop="8338"/>
              <exon start="8026" stop="7943"/>
              <exon start="7847" stop="7764"/>
              <exon start="7424" stop="7339"/>
              <exon start="6990" stop="6900"/>
              <exon start="6144" stop="6064"/>
              <exon start="5812" stop="5738"/>
              <exon start="5642" stop="5303"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569242" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATGTATTAGCAGAAATTAGGGGAGAATCATCATCATTCAACAACAGCTAAAACCCTAGATTGAGAAATTGAAGTATTGAAAACCTTTATTTGATCTATAACAACAATGCCGCAAGTGAAGATCGTCGCCAGGAATTTCATGGACATGGTGGCTTCATTGCCTGTCATGAAACTCGACATGCTTTACGACAATTCCTTTATCTGTGAAGCCATTCTTAG : ATCGTTACCTCCCTTAGCGAAGAAGTATGTGCTGCAAATGTTGTATATAGACATACCAATTACAGCCAAGTCGATGGAGGAGTGGGTGCTTCCAGATGGATTCTCAAAGCATAAAGTTGCCATTGATAGATTGATACAGCTGAGAGTAATGACAGAAACATTTGACAG : GAAAAAGGAAGCCATGTATCAACTAAACCCAAAATTTCAATTTAATCTTCAGAAGCATATAGTCTATGG : TGGAGTCTTACCAAGGGAACCAATGCCTTCTAATATCACTGTGAGGCTTCCTAGCTTGGAGGAGTTAGAGGCATATGCTGTCGAACAATGGGAG : TGCTTTCTGCTGAACCTTATAAGCTCCAGTGAAGCTGGAAAGACCACAAACATAAGCTCTTCGATGATGAAAATCTTCCAGCGTGGACTTTTAAGTCAGAG : AGACGATAGAGAACCTCCAAGGTTGACTGAAAGTGGGTTCCAATTCTTG : CTAATGGACACAAATGCACAGCTTTGGTACATCATCAGGGAGTACATAACAAATGCTGAG : GAGCGAGGAGTGGATTCAGCAGATCTTATTGCATTTCTTTTGGAGCTAAGCTTTCATGTTACTGGCAAG : GCATACAATACAAACACAATAACTGATCTCCAGAGAAGTATAATTAAGGACCTTTCAGATTTGGGATTGGTCAAGCTGCAGCAG : GGAAGGAAAGAGAGTTGGTTTATTCCGACCAAACTGGCGACCAACCTGTCAATTAGCTTAGCGGATACAACTACTAGGAAACAG : GGTTTTATCGTTATTGAAACAAACTTCAGACTGTATGCATATTCAACATCAAAATTGCACTGTGAGATCCTACGCCTTTTTGCAAG : GGTGGAATACCAGCTTCCAAATCTCATTGTTGGTGCTATTAATAAAGAGAGTTTATATAAAGCTTTTCAAAACGGCATTACTTCTGAGCAG : ATAGTTTCTTTCCTTCAGCAGAATGCACATCCTAGGGTTGCCGAGAGAATACCATCTGTGCCGGAGAATGTTACTGATCAG : ATTAGATTGTGGGAATCTGATCTGAATCGGGTTGAGATGACGCCAGCCCACTTCTACGATGAATTCCCTTCTAAA : GATGTCTTTGAGGCTGCCTGTGATTTTGCCAGAGAATATGGAGGATTACTGTGGGAGGACTCTAAGCGCATGCGTCTCGTTGTTAAAGCTGATATTTTAGCCGAGATGAAGGAATTTCTTCGTCGTCAAAAGCAATAACTCTTCTTTGCATACTGTCTTCATTTAAATGAAGGGTTTCATCAGTTATGTCCATCTATATATTTATTCCCAACTTAACTTGTACATGAATTTTGTTGTGGGTGTATTGTATTTCATTGTGCTTCGATTTCCTTCTTTCGACACCTTGTGATGTTGTACTAATAATGGGACTACAAATCATCGTCAAAACTATTGATAGCCT</gDNA_template>
            <first_frame> Y  V  L  A  E  I  R  G  E  S  S  S  F  N  N  S  *  N  P  R  L  R  N  *  S  I  E  N  L  Y  L  I  Y  N  N  N  A  A  S  E  D  R  R  Q  E  F  H  G  H  G  G  F  I  A  C  H  E  T  R  H  A  L  R  Q  F  L  Y  L  *  S  H  S  *  :  I  V  T  S  L  S  E  E  V  C  A  A  N  V  V  Y  R  H  T  N  Y  S  Q  V  D  G  G  V  G  A  S  R  W  I  L  K  A  *  S  C  H  *  *  I  D  T  A  E  S  N  D  R  N  I  *  Q  :  E  K  G  S  H  V  S  T  K  P  K  I  S  I  *  S  S  E  A  Y  S  L  W  :  W  S  L  T  K  G  T  N  A  F  *  Y  H  C  E  A  S  *  L  G  G  V  R  G  I  C  C  R  T  M  G   : V  L  S  A  E  P  Y  K  L  Q  *  S  W  K  D  H  K  H  K  L  F  D  D  E  N  L  P  A  W  T  F  K  S  E  :  R  R  *  R  T  S  K  V  D  *  K  W  V  P  I  L   : A  N  G  H  K  C  T  A  L  V  H  H  Q  G  V  H  N  K  C  *   : G  A  R  S  G  F  S  R  S  Y  C  I  S  F  G  A  K  L  S  C  Y  W  Q   : G  I  Q  Y  K  H  N  N  *  S  P  E  K  Y  N  *  G  P  F  R  F  G  I  G  Q  A  A  A   : G  K  E  R  E  L  V  Y  S  D  Q  T  G  D  Q  P  V  N  *  L  S  G  Y  N  Y  *  E  T   : G  F  Y  R  Y  *  N  K  L  Q  T  V  C  I  F  N  I  K  I  A  L  *  D  P  T  P  F  C  K  :  G  G  I  P  A  S  K  S  H  C  W  C  Y  *  *  R  E  F  I  *  S  F  S  K  R  H  Y  F  *  A   : D  S  F  F  P  S  A  E  C  T  S  *  G  C  R  E  N  T  I  C  A  G  E  C  Y  *  S   : D  *  I  V  G  I  *  S  E  S  G  *  D  D  A  S  P  L  L  R  *  I  P  F  *   : R  C  L  *  G  C  L  *  F  C  Q  R  I  W  R  I  T  V  G  G  L  *  A  H  A  S  R  C  *  S  *  Y  F  S  R  D  E  G  I  S  S  S  S  K  A  I  T  L  L  C  I  L  S  S  F  K  *  R  V  S  S  V  M  S  I  Y  I  F  I  P  N  L  T  C  T  *  I  L  L  W  V  Y  C  I  S  L  C  F  D  F  L  L  S  T  P  C  D  V  V  L  I  M  G  L  Q  I  I  V  K  T  I  D  S   </first_frame>
            <second_frame>  M  Y  *  Q  K  L  G  E  N  H  H  H  S  T  T  A  K  T  L  D  *  E  I  E  V  L  K  T  F  I  *  S  I  T  T  M  P  Q  V  K  I  V  A  R  N  F  M  D  M  V  A  S  L  P  V  M  K  L  D  M  L  Y  D  N  S  F  I  C  E  A  I  L  R :   S  L  P  P  L  A  K  K  Y  V  L  Q  M  L  Y  I  D  I  P  I  T  A  K  S  M  E  E  W  V  L  P  D  G  F  S  K  H  K  V  A  I  D  R  L  I  Q  L  R  V  M  T  E  T  F  D  R :   K  K  E  A  M  Y  Q  L  N  P  K  F  Q  F  N  L  Q  K  H  I  V  Y  G :   G  V  L  P  R  E  P  M  P  S  N  I  T  V  R  L  P  S  L  E  E  L  E  A  Y  A  V  E  Q  W  E  :  C  F  L  L  N  L  I  S  S  S  E  A  G  K  T  T  N  I  S  S  S  M  M  K  I  F  Q  R  G  L  L  S  Q  R :   D  D  R  E  P  P  R  L  T  E  S  G  F  Q  F  L  :  L  M  D  T  N  A  Q  L  W  Y  I  I  R  E  Y  I  T  N  A  E  :  E  R  G  V  D  S  A  D  L  I  A  F  L  L  E  L  S  F  H  V  T  G  K  :  A  Y  N  T  N  T  I  T  D  L  Q  R  S  I  I  K  D  L  S  D  L  G  L  V  K  L  Q  Q  :  G  R  K  E  S  W  F  I  P  T  K  L  A  T  N  L  S  I  S  L  A  D  T  T  T  R  K  Q  :  G  F  I  V  I  E  T  N  F  R  L  Y  A  Y  S  T  S  K  L  H  C  E  I  L  R  L  F  A  R :   V  E  Y  Q  L  P  N  L  I  V  G  A  I  N  K  E  S  L  Y  K  A  F  Q  N  G  I  T  S  E  Q  :  I  V  S  F  L  Q  Q  N  A  H  P  R  V  A  E  R  I  P  S  V  P  E  N  V  T  D  Q  :  I  R  L  W  E  S  D  L  N  R  V  E  M  T  P  A  H  F  Y  D  E  F  P  S  K  :  D  V  F  E  A  A  C  D  F  A  R  E  Y  G  G  L  L  W  E  D  S  K  R  M  R  L  V  V  K  A  D  I  L  A  E  M  K  E  F  L  R  R  Q  K  Q  *  L  F  F  A  Y  C  L  H  L  N  E  G  F  H  Q  L  C  P  S  I  Y  L  F  P  T  *  L  V  H  E  F  C  C  G  C  I  V  F  H  C  A  S  I  S  F  F  R  H  L  V  M  L  Y  *  *  W  D  Y  K  S  S  S  K  L  L  I  A  </second_frame>
            <third_frame>   C  I  S  R  N  *  G  R  I  I  I  I  Q  Q  Q  L  K  P  *  I  E  K  L  K  Y  *  K  P  L  F  D  L  *  Q  Q  C  R  K  *  R  S  S  P  G  I  S  W  T  W  W  L  H  C  L  S  *  N  S  T  C  F  T  T  I  P  L  S  V  K  P  F  L   : D  R  Y  L  P  *  R  R  S  M  C  C  K  C  C  I  *  T  Y  Q  L  Q  P  S  R  W  R  S  G  C  F  Q  M  D  S  Q  S  I  K  L  P  L  I  D  *  Y  S  *  E  *  *  Q  K  H  L  T   : G  K  R  K  P  C  I  N  *  T  Q  N  F  N  L  I  F  R  S  I  *  S  M   : V  E  S  Y  Q  G  N  Q  C  L  L  I  S  L  *  G  F  L  A  W  R  S  *  R  H  M  L  S  N  N  G  S :   A  F  C  *  T  L  *  A  P  V  K  L  E  R  P  Q  T  *  A  L  R  *  *  K  S  S  S  V  D  F  *  V  R   : E  T  I  E  N  L  Q  G  *  L  K  V  G  S  N  S  C :   *  W  T  Q  M  H  S  F  G  T  S  S  G  S  T  *  Q  M  L  R :   S  E  E  W  I  Q  Q  I  L  L  H  F  F  W  S  *  A  F  M  L  L  A  R :   H  T  I  Q  T  Q  *  L  I  S  R  E  V  *  L  R  T  F  Q  I  W  D  W  S  S  C  S  R :   E  G  K  R  V  G  L  F  R  P  N  W  R  P  T  C  Q  L  A  *  R  I  Q  L  L  G  N  R :   V  L  S  L  L  K  Q  T  S  D  C  M  H  I  Q  H  Q  N  C  T  V  R  S  Y  A  F  L  Q   : G  W  N  T  S  F  Q  I  S  L  L  V  L  L  I  K  R  V  Y  I  K  L  F  K  T  A  L  L  L  S  R :   *  F  L  S  F  S  R  M  H  I  L  G  L  P  R  E  Y  H  L  C  R  R  M  L  L  I  R :   L  D  C  G  N  L  I  *  I  G  L  R  *  R  Q  P  T  S  T  M  N  S  L  L  K :   M  S  L  R  L  P  V  I  L  P  E  N  M  E  D  Y  C  G  R  T  L  S  A  C  V  S  L  L  K  L  I  F  *  P  R  *  R  N  F  F  V  V  K  S  N  N  S  S  L  H  T  V  F  I  *  M  K  G  F  I  S  Y  V  H  L  Y  I  Y  S  Q  L  N  L  Y  M  N  F  V  V  G  V  L  Y  F  I  V  L  R  F  P  S  F  D  T  L  *  C  C  T  N  N  G  T  T  N  H  R  Q  N  Y  *  *  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11831" stop="11707"/>
                    <exon start="11234" stop="11067"/>
                    <exon start="10400" stop="10332"/>
                    <exon start="9763" stop="9670"/>
                    <exon start="9501" stop="9401"/>
                    <exon start="9269" stop="9221"/>
                    <exon start="9142" stop="9083"/>
                    <exon start="8406" stop="8338"/>
                    <exon start="8026" stop="7943"/>
                    <exon start="7847" stop="7764"/>
                    <exon start="7424" stop="7339"/>
                    <exon start="6990" stop="6900"/>
                    <exon start="6144" stop="6064"/>
                    <exon start="5812" stop="5738"/>
                    <exon start="5642" stop="5505"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1371</number_coding_nucleotides>
                  <number_encoded_amino_acids>457</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SITTMPQVKIVARNFMDMVASLPVMKLDMLYDNSFICEAILRSLPPLAKKYVLQMLYIDIPITAKSMEEWVLPDGFSKHKVAIDRLIQLRVMTETFDRKKEAMYQLNPKFQFNLQKHIVYGGVLPREPMPSNITVRLPSLEELEAYAVEQWECFLLNLISSSEAGKTTNISSSMMKIFQRGLLSQRDDREPPRLTESGFQFLLMDTNAQLWYIIREYITNAEERGVDSADLIAFLLELSFHVTGKAYNTNTITDLQRSIIKDLSDLGLVKLQQGRKESWFIPTKLATNLSISLADTTTRKQGFIVIETNFRLYAYSTSKLHCEILRLFARVEYQLPNLIVGAINKESLYKAFQNGITSEQIVSFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVEMTPAHFYDEFPSKDVFEAACDFAREYGGLLWEDSKRMRLVVKADILAEMKEFLRRQKQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="17665" PGL_stop="18724"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17665" e_stop="18724"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="17665" e_stop="18724" e_length="1060"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17665" stop="18724"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574214" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAAACGGTGCCCTTTCATATTCCACCTACCACAAACTCTATCGTTTGACCTTCTTCCTCCTCACTGCAAACCAAACCCCAATGATTAAATCTTCATCTTCAATCTGCTTTTTACCTGCCACTTCAAATCAACATTCTTGATTTTCATAATCAGATCCAAAATTTCATAATATTTGAATCAAAGACTGAAACTTTATTGTATCAATCTGGTTCCCTTCAAATCAAGATTCTTGATTCCCACAAACATATCAAAGATTCACCATATTTGACTCCAAGACTGAAACTTTCTTGTGTATATATCTTTTCATTGTTGAGAAATTGATGTATATGACTTTGAAGGAAGCATAGTCTGTTCTTTTCAAGATTTGAAGAGTGAAAAAGAGACACAGAATATGGGATCACCATCAGCAGCAGCAGCAGCAGGGGTAAAGGCTAGAGTTTTAGATATTCCACTTCATGGGATTGGTTTTGAGTTTGTAGAAATCACACCCCACAAAATCACTGGTCGTCTTCCTGTGACAGATAAGTGTTGTCAGCCATTTAAGGTGCTGCACGGTGGAGTTTCAGCTTTGATGGCTGAGTCTCTAGCAAGTATGGGAGCACACATGGCTTCTGGTTTTAAGAGAGTGGCTGGAGTTCATCTAAGCATCCATCATCTCAAGAGTGCTCATTTAGGGGACCTTGTGTTTGCTGAGGCTGTGCCAATCAATATTGGCAAAAGTATTCATGTTTGGGAAGTTTGTCTCTGGAAGATTGATCCAGCTAATGAGGAAAAAAAGACTTTGTTAGCATCATCAAGAGTTACTCTTAAGGTCAACATGTCTATACCTGAAAATGCTAAAGATGCTGCTGTGAATCTCAAGAAATATGCTAAGTTATGATCATGTTTAATTGAGTTTGTTTGTAAGCAAAATTGTAGAGAGTAACAAGACAATAATGCAGAGTTATGCAAAACATGTTGTAAACCCCTTTGACATTTTCTGTCCTGACACGTTTTTATGAAAAAGTACCCAAAAAAGAGTGTAATCTACATTATCTGGAGTAGTTACTAATTTCTTTG</gDNA_template>
            <first_frame> R  N  G  A  L  S  Y  S  T  Y  H  K  L  Y  R  L  T  F  F  L  L  T  A  N  Q  T  P  M  I  K  S  S  S  S  I  C  F  L  P  A  T  S  N  Q  H  S  *  F  S  *  S  D  P  K  F  H  N  I  *  I  K  D  *  N  F  I  V  S  I  W  F  P  S  N  Q  D  S  *  F  P  Q  T  Y  Q  R  F  T  I  F  D  S  K  T  E  T  F  L  C  I  Y  L  F  I  V  E  K  L  M  Y  M  T  L  K  E  A  *  S  V  L  F  K  I  *  R  V  K  K  R  H  R  I  W  D  H  H  Q  Q  Q  Q  Q  Q  G  *  R  L  E  F  *  I  F  H  F  M  G  L  V  L  S  L  *  K  S  H  P  T  K  S  L  V  V  F  L  *  Q  I  S  V  V  S  H  L  R  C  C  T  V  E  F  Q  L  *  W  L  S  L  *  Q  V  W  E  H  T  W  L  L  V  L  R  E  W  L  E  F  I  *  A  S  I  I  S  R  V  L  I  *  G  T  L  C  L  L  R  L  C  Q  S  I  L  A  K  V  F  M  F  G  K  F  V  S  G  R  L  I  Q  L  M  R  K  K  R  L  C  *  H  H  Q  E  L  L  L  R  S  T  C  L  Y  L  K  M  L  K  M  L  L  *  I  S  R  N  M  L  S  Y  D  H  V  *  L  S  L  F  V  S  K  I  V  E  S  N  K  T  I  M  Q  S  Y  A  K  H  V  V  N  P  F  D  I  F  C  P  D  T  F  L  *  K  S  T  Q  K  R  V  *  S  T  L  S  G  V  V  T  N  F  F  </first_frame>
            <second_frame>  E  T  V  P  F  H  I  P  P  T  T  N  S  I  V  *  P  S  S  S  S  L  Q  T  K  P  Q  *  L  N  L  H  L  Q  S  A  F  Y  L  P  L  Q  I  N  I  L  D  F  H  N  Q  I  Q  N  F  I  I  F  E  S  K  T  E  T  L  L  Y  Q  S  G  S  L  Q  I  K  I  L  D  S  H  K  H  I  K  D  S  P  Y  L  T  P  R  L  K  L  S  C  V  Y  I  F  S  L  L  R  N  *  C  I  *  L  *  R  K  H  S  L  F  F  S  R  F  E  E  *  K  R  D  T  E  Y  G  I  T  I  S  S  S  S  S  R  G  K  G  *  S  F  R  Y  S  T  S  W  D  W  F  *  V  C  R  N  H  T  P  Q  N  H  W  S  S  S  C  D  R  *  V  L  S  A  I  *  G  A  A  R  W  S  F  S  F  D  G  *  V  S  S  K  Y  G  S  T  H  G  F  W  F  *  E  S  G  W  S  S  S  K  H  P  S  S  Q  E  C  S  F  R  G  P  C  V  C  *  G  C  A  N  Q  Y  W  Q  K  Y  S  C  L  G  S  L  S  L  E  D  *  S  S  *  *  G  K  K  D  F  V  S  I  I  K  S  Y  S  *  G  Q  H  V  Y  T  *  K  C  *  R  C  C  C  E  S  Q  E  I  C  *  V  M  I  M  F  N  *  V  C  L  *  A  K  L  *  R  V  T  R  Q  *  C  R  V  M  Q  N  M  L  *  T  P  L  T  F  S  V  L  T  R  F  Y  E  K  V  P  K  K  E  C  N  L  H  Y  L  E  *  L  L  I  S  L </second_frame>
            <third_frame>   K  R  C  P  F  I  F  H  L  P  Q  T  L  S  F  D  L  L  P  P  H  C  K  P  N  P  N  D  *  I  F  I  F  N  L  L  F  T  C  H  F  K  S  T  F  L  I  F  I  I  R  S  K  I  S  *  Y  L  N  Q  R  L  K  L  Y  C  I  N  L  V  P  F  K  S  R  F  L  I  P  T  N  I  S  K  I  H  H  I  *  L  Q  D  *  N  F  L  V  Y  I  S  F  H  C  *  E  I  D  V  Y  D  F  E  G  S  I  V  C  S  F  Q  D  L  K  S  E  K  E  T  Q  N  M  G  S  P  S  A  A  A  A  A  G  V  K  A  R  V  L  D  I  P  L  H  G  I  G  F  E  F  V  E  I  T  P  H  K  I  T  G  R  L  P  V  T  D  K  C  C  Q  P  F  K  V  L  H  G  G  V  S  A  L  M  A  E  S  L  A  S  M  G  A  H  M  A  S  G  F  K  R  V  A  G  V  H  L  S  I  H  H  L  K  S  A  H  L  G  D  L  V  F  A  E  A  V  P  I  N  I  G  K  S  I  H  V  W  E  V  C  L  W  K  I  D  P  A  N  E  E  K  K  T  L  L  A  S  S  R  V  T  L  K  V  N  M  S  I  P  E  N  A  K  D  A  A  V  N  L  K  K  Y  A  K  L  *  S  C  L  I  E  F  V  C  K  Q  N  C  R  E  *  Q  D  N  N  A  E  L  C  K  T  C  C  K  P  L  *  H  F  L  S  *  H  V  F  M  K  K  Y  P  K  K  S  V  I  Y  I  I  W  S  S  Y  *  F  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17979" stop="18545"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>564</number_coding_nucleotides>
                  <number_encoded_amino_acids>188</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EIDVYDFEGSIVCSFQDLKSEKETQNMGSPSAAAAAGVKARVLDIPLHGIGFEFVEITPHKITGRLPVTDKCCQPFKVLHGGVSALMAESLASMGAHMASGFKRVAGVHLSIHHLKSAHLGDLVFAEAVPINIGKSIHVWEVCLWKIDPANEEKKTLLASSRVTLKVNMSIPENAKDAAVNLKKYAKL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17750" stop="17986"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LNLHLQSAFYLPLQINILDFHNQIQNFIIFESKTETLLYQSGSLQIKILDSHKHIKDSPYLTPRLKLSCVYIFSLLRN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="25912" PGL_stop="33083"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25912" e_stop="26082"/>
            <exon e_start="26868" e_stop="26961"/>
            <exon e_start="27065" e_stop="27185"/>
            <exon e_start="28508" e_stop="28581"/>
            <exon e_start="28821" e_stop="28897"/>
            <exon e_start="29168" e_stop="29204"/>
            <exon e_start="29277" e_stop="29362"/>
            <exon e_start="29650" e_stop="29709"/>
            <exon e_start="29876" e_stop="30024"/>
            <exon e_start="30333" e_stop="30459"/>
            <exon e_start="30819" e_stop="30974"/>
            <exon e_start="31068" e_stop="31178"/>
            <exon e_start="31807" e_stop="31917"/>
            <exon e_start="32146" e_stop="32244"/>
            <exon e_start="32520" e_stop="32668"/>
            <exon e_start="32766" e_stop="33083"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.971" acc_prob="0.815" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.894" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.334" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.477" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.818" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="25912" e_stop="26082" e_length="171"/>
          </exon>
          <intron i_serial="1" don_prob="0.971" acc_prob="0.815">
            <gDNA_intron_boundary i_start="26083" i_stop="26867" i_length="785"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="26868" e_stop="26961" e_length="94"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.980">
            <gDNA_intron_boundary i_start="26962" i_stop="27064" i_length="103"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="27065" e_stop="27185" e_length="121"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.996">
            <gDNA_intron_boundary i_start="27186" i_stop="28507" i_length="1322"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="28508" e_stop="28581" e_length="74"/>
          </exon>
          <intron i_serial="4" don_prob="0.894" acc_prob="0.983">
            <gDNA_intron_boundary i_start="28582" i_stop="28820" i_length="239"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="28821" e_stop="28897" e_length="77"/>
          </exon>
          <intron i_serial="5" don_prob="0.990" acc_prob="0.999">
            <gDNA_intron_boundary i_start="28898" i_stop="29167" i_length="270"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="29168" e_stop="29204" e_length="37"/>
          </exon>
          <intron i_serial="6" don_prob="0.334" acc_prob="0.999">
            <gDNA_intron_boundary i_start="29205" i_stop="29276" i_length="72"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="29277" e_stop="29362" e_length="86"/>
          </exon>
          <intron i_serial="7" don_prob="0.477" acc_prob="1.000">
            <gDNA_intron_boundary i_start="29363" i_stop="29649" i_length="287"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="29650" e_stop="29709" e_length="60"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="29710" i_stop="29875" i_length="166"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="29876" e_stop="30024" e_length="149"/>
          </exon>
          <intron i_serial="9" don_prob="0.992" acc_prob="1.000">
            <gDNA_intron_boundary i_start="30025" i_stop="30332" i_length="308"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="30333" e_stop="30459" e_length="127"/>
          </exon>
          <intron i_serial="10" don_prob="1.000" acc_prob="0.986">
            <gDNA_intron_boundary i_start="30460" i_stop="30818" i_length="359"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="30819" e_stop="30974" e_length="156"/>
          </exon>
          <intron i_serial="11" don_prob="0.818" acc_prob="1.000">
            <gDNA_intron_boundary i_start="30975" i_stop="31067" i_length="93"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="31068" e_stop="31178" e_length="111"/>
          </exon>
          <intron i_serial="12" don_prob="0.973" acc_prob="0.993">
            <gDNA_intron_boundary i_start="31179" i_stop="31806" i_length="628"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="31807" e_stop="31917" e_length="111"/>
          </exon>
          <intron i_serial="13" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="31918" i_stop="32145" i_length="228"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="32146" e_stop="32244" e_length="99"/>
          </exon>
          <intron i_serial="14" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="32245" i_stop="32519" i_length="275"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="32520" e_stop="32668" e_length="149"/>
          </exon>
          <intron i_serial="15" don_prob="0.962" acc_prob="1.000">
            <gDNA_intron_boundary i_start="32669" i_stop="32765" i_length="97"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="32766" e_stop="33083" e_length="318"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25912" stop="26082"/>
              <exon start="26868" stop="26961"/>
              <exon start="27065" stop="27185"/>
              <exon start="28508" stop="28581"/>
              <exon start="28821" stop="28897"/>
              <exon start="29168" stop="29204"/>
              <exon start="29277" stop="29362"/>
              <exon start="29650" stop="29709"/>
              <exon start="29876" stop="30024"/>
              <exon start="30333" stop="30459"/>
              <exon start="30819" stop="30974"/>
              <exon start="31068" stop="31178"/>
              <exon start="31807" stop="31917"/>
              <exon start="32146" stop="32244"/>
              <exon start="32520" stop="32668"/>
              <exon start="32766" stop="33083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582182" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAGAAAACAAACTTTTTGCAGTATAAAGTGGAAGCCATTAATGCACAAGAGATCATACACAAAGAAGGCTGAGGGTTAGCAGAGAAACATGGAATCTGGAAAGAAGAGTACTCTGGCTCTGCTACCACTCTTCCTTTCTTTCCTGTTTTACTTTGATTTCTCAAAAAAG : CTTCCCTCAAGTGACTGCAGCCTTCTGCCTCATAATCACTATTGGATATCCAGCAAACGTATTGTGACTCCAAACGGGACAATTTCCGGTGCAG : TTGAGATAAAGGAAGGAAGAATTATATCTGTTGTTGCTGAAGAGAATTGGCATGTAAATTCTCGGTTTACCACAGTGGTCAATTATAGGGAGTCTGTGGTCATGCCTGGATTTATTGATGT : GCATGCCCATCTTGATGATCCTGGAAGATCAGAATGGGAAGGGTTTCCTTCAGGAACAAAAGCAGCTGCTGCAG : GTGGAGTAACCACATTAGTTGACATGCCTCTTAATAGTGCTCCATCAACAGTTTCTGAAGAGACTTTAAAACTTAAG : GTACAGGCTGCAGAAGGGAGGGTCTACGTGGATGTTG : GTTTCTGGGGAGGTTTGGTTCCAGAAAATGCAGAAAATACAAGTTCTCTGGAAAGACTTCTAAATGCAGGGGTTCTGGGATTGAAG : TCTTTTATGGTGCCATCAGGCATCAATGACTTTCCCATGACAACTGCATCCCACATAAAG : GAGGCACTCCCAACTCTGGCTCGATACAAAAGACCCCTACTTGTTCATGCCGAAGTGCTAGTAGATCTTGATGAAAAAGTGGAGCTGGAGGATGGGGTAGAGAATGCTAGATCATACTCTACATATCTCAAGACCAGGCCTGCTTCAAT : GGAAGAGGCTGCTATCAATCAGCTCATAACACTGTCAAAGGACGCGAGGGCTGGTGGTTCTGCTGAAGGAGCTCATCTCCATATTGTTCATCTATCTGATGCTAGAACTTCACTAAACCTCATTAAG : GAAGCCAAACAAAGGGGTGATAGCATCACCGTTGAAACTTGCCCCCATTATCTCGCTTTTGCAGCTGAAGATATTCCTGATGGAGATACTCGGTTTAAGTGTGCTCCACCCATTCGTGATGCAGCCAATAAAGAAAAACTATGGGATGCGTTACTG : GATGGAGATATTGACATGTTAAGTTCTGACCACTCGCCTTCTGTGCCAGAAATGAAACTCTTAGATGAGGGAGACTTCTTGAAAGCATGGGGTGGCATATCTTCCTTACAG : TTTGTTCTACCCGTGACATGGACACATGGGCGTAAGTATGGAATAACATATGAGCAGTTGGCTTCTTGGTGGAGTGAGAAGCCTGCCAAACTTGCAGGTCTAACGACTAAG : GGGGCAATTGCTGTGGGGAACCAAGCAGATATAGTTGTTTGGGAGCCAGACATGGAGTTCGACCTGGATAATGACTACCCTGTACATATTAAGCACCCT : AGTATATCCGCATACATGGGATCAAGACTCTCTGGGAAAGTTTTGGCAACCTTTGTGGGCGGAAATCTGGTATACAAGGAGGGAAATCATGCTTCTCAAGCATGCGCTCTCCCAATTCTTCATAAATAGTTAGTGCTACGAGCCTATTG : GTTGGAGACGACCACATGGCATGACATGTAGATGGAATTGATAACACTGTCATTCAGATCAAAACAAATCTTTGCATGGATCTAAGTTGTTCATCGTCTTAACTCTTCTTTTAGGCGTGCAACAGGGCTGGAGTGTATATAATCTGTTGTACGCCCTTAGTTGATAGTCATTCGATATTTAACTCTGTAGAAAATAAATATGTCACTTTAAGCTGAAAGCTCTTGTTGTTGATGAAGTACACATTAAGACTTGAATACATCTTCATAGTTACAAATTCCATGAGAAACTAATATCAACTTAATTTTGTCTTTCTAGCC</gDNA_template>
            <first_frame> K  R  K  Q  T  F  C  S  I  K  W  K  P  L  M  H  K  R  S  Y  T  K  K  A  E  G  *  Q  R  N  M  E  S  G  K  K  S  T  L  A  L  L  P  L  F  L  S  F  L  F  Y  F  D  F  S  K  K  :  L  P  S  S  D  C  S  L  L  P  H  N  H  Y  W  I  S  S  K  R  I  V  T  P  N  G  T  I  S  G  A   : V  E  I  K  E  G  R  I  I  S  V  V  A  E  E  N  W  H  V  N  S  R  F  T  T  V  V  N  Y  R  E  S  V  V  M  P  G  F  I  D  V :   H  A  H  L  D  D  P  G  R  S  E  W  E  G  F  P  S  G  T  K  A  A  A  A   : G  G  V  T  T  L  V  D  M  P  L  N  S  A  P  S  T  V  S  E  E  T  L  K  L  K  :  V  Q  A  A  E  G  R  V  Y  V  D  V   : G  F  W  G  G  L  V  P  E  N  A  E  N  T  S  S  L  E  R  L  L  N  A  G  V  L  G  L  K  :  S  F  M  V  P  S  G  I  N  D  F  P  M  T  T  A  S  H  I  K  :  E  A  L  P  T  L  A  R  Y  K  R  P  L  L  V  H  A  E  V  L  V  D  L  D  E  K  V  E  L  E  D  G  V  E  N  A  R  S  Y  S  T  Y  L  K  T  R  P  A  S  M :   E  E  A  A  I  N  Q  L  I  T  L  S  K  D  A  R  A  G  G  S  A  E  G  A  H  L  H  I  V  H  L  S  D  A  R  T  S  L  N  L  I  K  :  E  A  K  Q  R  G  D  S  I  T  V  E  T  C  P  H  Y  L  A  F  A  A  E  D  I  P  D  G  D  T  R  F  K  C  A  P  P  I  R  D  A  A  N  K  E  K  L  W  D  A  L  L  :  D  G  D  I  D  M  L  S  S  D  H  S  P  S  V  P  E  M  K  L  L  D  E  G  D  F  L  K  A  W  G  G  I  S  S  L  Q  :  F  V  L  P  V  T  W  T  H  G  R  K  Y  G  I  T  Y  E  Q  L  A  S  W  W  S  E  K  P  A  K  L  A  G  L  T  T  K  :  G  A  I  A  V  G  N  Q  A  D  I  V  V  W  E  P  D  M  E  F  D  L  D  N  D  Y  P  V  H  I  K  H  P  :  S  I  S  A  Y  M  G  S  R  L  S  G  K  V  L  A  T  F  V  G  G  N  L  V  Y  K  E  G  N  H  A  S  Q  A  C  A  L  P  I  L  H  K  *  L  V  L  R  A  Y  W :   L  E  T  T  T  W  H  D  M  *  M  E  L  I  T  L  S  F  R  S  K  Q  I  F  A  W  I  *  V  V  H  R  L  N  S  S  F  R  R  A  T  G  L  E  C  I  *  S  V  V  R  P  *  L  I  V  I  R  Y  L  T  L  *  K  I  N  M  S  L  *  A  E  S  S  C  C  *  *  S  T  H  *  D  L  N  T  S  S  *  L  Q  I  P  *  E  T  N  I  N  L  I  L  S  F  *   </first_frame>
            <second_frame>  K  E  N  K  L  F  A  V  *  S  G  S  H  *  C  T  R  D  H  T  Q  R  R  L  R  V  S  R  E  T  W  N  L  E  R  R  V  L  W  L  C  Y  H  S  S  F  L  S  C  F  T  L  I  S  Q  K  S :   F  P  Q  V  T  A  A  F  C  L  I  I  T  I  G  Y  P  A  N  V  L  *  L  Q  T  G  Q  F  P  V  Q  :  L  R  *  R  K  E  E  L  Y  L  L  L  L  K  R  I  G  M  *  I  L  G  L  P  Q  W  S  I  I  G  S  L  W  S  C  L  D  L  L  M   : C  M  P  I  L  M  I  L  E  D  Q  N  G  K  G  F  L  Q  E  Q  K  Q  L  L  Q  :  V  E  *  P  H  *  L  T  C  L  L  I  V  L  H  Q  Q  F  L  K  R  L  *  N  L  R :   Y  R  L  Q  K  G  G  S  T  W  M  L  :  V  S  G  E  V  W  F  Q  K  M  Q  K  I  Q  V  L  W  K  D  F  *  M  Q  G  F  W  D  *  S :   L  L  W  C  H  Q  A  S  M  T  F  P  *  Q  L  H  P  T  *  R :   R  H  S  Q  L  W  L  D  T  K  D  P  Y  L  F  M  P  K  C  *  *  I  L  M  K  K  W  S  W  R  M  G  *  R  M  L  D  H  T  L  H  I  S  R  P  G  L  L  Q   : W  K  R  L  L  S  I  S  S  *  H  C  Q  R  T  R  G  L  V  V  L  L  K  E  L  I  S  I  L  F  I  Y  L  M  L  E  L  H  *  T  S  L  R :   K  P  N  K  G  V  I  A  S  P  L  K  L  A  P  I  I  S  L  L  Q  L  K  I  F  L  M  E  I  L  G  L  S  V  L  H  P  F  V  M  Q  P  I  K  K  N  Y  G  M  R  Y  W :   M  E  I  L  T  C  *  V  L  T  T  R  L  L  C  Q  K  *  N  S  *  M  R  E  T  S  *  K  H  G  V  A  Y  L  P  Y  S :   L  F  Y  P  *  H  G  H  M  G  V  S  M  E  *  H  M  S  S  W  L  L  G  G  V  R  S  L  P  N  L  Q  V  *  R  L  R :   G  Q  L  L  W  G  T  K  Q  I  *  L  F  G  S  Q  T  W  S  S  T  W  I  M  T  T  L  Y  I  L  S  T  L :   V  Y  P  H  T  W  D  Q  D  S  L  G  K  F  W  Q  P  L  W  A  E  I  W  Y  T  R  R  E  I  M  L  L  K  H  A  L  S  Q  F  F  I  N  S  *  C  Y  E  P  I   : G  W  R  R  P  H  G  M  T  C  R  W  N  *  *  H  C  H  S  D  Q  N  K  S  L  H  G  S  K  L  F  I  V  L  T  L  L  L  G  V  Q  Q  G  W  S  V  Y  N  L  L  Y  A  L  S  *  *  S  F  D  I  *  L  C  R  K  *  I  C  H  F  K  L  K  A  L  V  V  D  E  V  H  I  K  T  *  I  H  L  H  S  Y  K  F  H  E  K  L  I  S  T  *  F  C  L  S  S  </second_frame>
            <third_frame>   K  K  T  N  F  L  Q  Y  K  V  E  A  I  N  A  Q  E  I  I  H  K  E  G  *  G  L  A  E  K  H  G  I  W  K  E  E  Y  S  G  S  A  T  T  L  P  F  F  P  V  L  L  *  F  L  K  K   : A  S  L  K  *  L  Q  P  S  A  S  *  S  L  L  D  I  Q  Q  T  Y  C  D  S  K  R  D  N  F  R  C  S :   *  D  K  G  R  K  N  Y  I  C  C  C  *  R  E  L  A  C  K  F  S  V  Y  H  S  G  Q  L  *  G  V  C  G  H  A  W  I  Y  *  C  :  A  C  P  S  *  *  S  W  K  I  R  M  G  R  V  S  F  R  N  K  S  S  C  C  R :   W  S  N  H  I  S  *  H  A  S  *  *  C  S  I  N  S  F  *  R  D  F  K  T  *   : G  T  G  C  R  R  E  G  L  R  G  C  W :   F  L  G  R  F  G  S  R  K  C  R  K  Y  K  F  S  G  K  T  S  K  C  R  G  S  G  I  E   : V  F  Y  G  A  I  R  H  Q  *  L  S  H  D  N  C  I  P  H  K   : G  G  T  P  N  S  G  S  I  Q  K  T  P  T  C  S  C  R  S  A  S  R  S  *  *  K  S  G  A  G  G  W  G  R  E  C  *  I  I  L  Y  I  S  Q  D  Q  A  C  F  N  :  G  R  G  C  Y  Q  S  A  H  N  T  V  K  G  R  E  G  W  W  F  C  *  R  S  S  S  P  Y  C  S  S  I  *  C  *  N  F  T  K  P  H  *   : G  S  Q  T  K  G  *  *  H  H  R  *  N  L  P  P  L  S  R  F  C  S  *  R  Y  S  *  W  R  Y  S  V  *  V  C  S  T  H  S  *  C  S  Q  *  R  K  T  M  G  C  V  T   : G  W  R  Y  *  H  V  K  F  *  P  L  A  F  C  A  R  N  E  T  L  R  *  G  R  L  L  E  S  M  G  W  H  I  F  L  T   : V  C  S  T  R  D  M  D  T  W  A  *  V  W  N  N  I  *  A  V  G  F  L  V  E  *  E  A  C  Q  T  C  R  S  N  D  *   : G  G  N  C  C  G  E  P  S  R  Y  S  C  L  G  A  R  H  G  V  R  P  G  *  *  L  P  C  T  Y  *  A  P   : *  Y  I  R  I  H  G  I  K  T  L  W  E  S  F  G  N  L  C  G  R  K  S  G  I  Q  G  G  K  S  C  F  S  S  M  R  S  P  N  S  S  *  I  V  S  A  T  S  L  L  :  V  G  D  D  H  M  A  *  H  V  D  G  I  D  N  T  V  I  Q  I  K  T  N  L  C  M  D  L  S  C  S  S  S  *  L  F  F  *  A  C  N  R  A  G  V  Y  I  I  C  C  T  P  L  V  D  S  H  S  I  F  N  S  V  E  N  K  Y  V  T  L  S  *  K  L  L  L  L  M  K  Y  T  L  R  L  E  Y  I  F  I  V  T  N  S  M  R  N  *  Y  Q  L  N  F  V  F  L  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25993" stop="26082"/>
                    <exon start="26868" stop="26961"/>
                    <exon start="27065" stop="27185"/>
                    <exon start="28508" stop="28581"/>
                    <exon start="28821" stop="28897"/>
                    <exon start="29168" stop="29204"/>
                    <exon start="29277" stop="29362"/>
                    <exon start="29650" stop="29709"/>
                    <exon start="29876" stop="30024"/>
                    <exon start="30333" stop="30459"/>
                    <exon start="30819" stop="30974"/>
                    <exon start="31068" stop="31178"/>
                    <exon start="31807" stop="31917"/>
                    <exon start="32146" stop="32244"/>
                    <exon start="32520" stop="32648"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1518</number_coding_nucleotides>
                  <number_encoded_amino_acids>506</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QRNMESGKKSTLALLPLFLSFLFYFDFSKKLPSSDCSLLPHNHYWISSKRIVTPNGTISGAVEIKEGRIISVVAEENWHVNSRFTTVVNYRESVVMPGFIDVHAHLDDPGRSEWEGFPSGTKAAAAGGVTTLVDMPLNSAPSTVSEETLKLKVQAAEGRVYVDVGFWGGLVPENAENTSSLERLLNAGVLGLKSFMVPSGINDFPMTTASHIKEALPTLARYKRPLLVHAEVLVDLDEKVELEDGVENARSYSTYLKTRPASMEEAAINQLITLSKDARAGGSAEGAHLHIVHLSDARTSLNLIKEAKQRGDSITVETCPHYLAFAAEDIPDGDTRFKCAPPIRDAANKEKLWDALLDGDIDMLSSDHSPSVPEMKLLDEGDFLKAWGGISSLQFVLPVTWTHGRKYGITYEQLASWWSEKPAKLAGLTTKGAIAVGNQADIVVWEPDMEFDLDNDYPVHIKHPSISAYMGSRLSGKVLATFVGGNLVYKEGNHASQACALPILHK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="33247" PGL_stop="35157"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33247" e_stop="33844"/>
            <exon e_start="34510" e_stop="35157"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.965" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="33247" e_stop="33844" e_length="598"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.965">
            <gDNA_intron_boundary i_start="33845" i_stop="34509" i_length="665"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="34510" e_stop="35157" e_length="648"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33247" stop="33844"/>
              <exon start="34510" stop="35157"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563661" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATGGACAGCTTACTGTATTGCCGTGTAACCCACCCTTCCCTCCATTTTAGAGTAACTGGATAACGCACCCAAAAGCTCAACAAAAATTCAAACTTTATCTTCAATGAATCTTTTCAACTTCAACTGCAAATGCAAATCCAACAATTTCTTCAGCATTCATCTTCCTCCGCCTCACAGCTCGCTCTGTAACCGTCGTACAACTAGGTTCTCCGTCCGTTTCTCATCCGAGTCAACTCACAGAGTCAAACTCGCCGAGTCACTGCAATCCGAAACCTTGAAGCTTCTAGAATGGCCCGCCGTGTGTCAACAGCTCTCCGCTTTCACGTCCACATCCATGGGATACGCCGCAGCACAATCTGCTCGGATTCCGGTGGGTAAAACTCGTGAAGAGAGCAGTAGACTTCTCTCTCAGACCTCGGCCGCGGTGGCTGTACCTCGGCCGTTGGATTTTACCGGAATTGAAGATATTTCCCCAATTGTTGATGCTTCCGTTGCAGGCGGTGTACTCTCGATTCGTGAACTTTGCTCTGTGAAACGAACCTTGGCAGCGGCGAGATTTTTGCTCCAACAGTTGGAGGAGATTGATTTTTCTGAAAG : TTAACTCAAAATGGCGAAGCATGTCTCATGTGGTAGTGATGGATTCTCATGAAGTTCCATTTAAATAGTATTGAGCAGTTTCATTAGAATGTCTAATTATCTTCAAACAGGTACTCTTCTCTGAAGGAAATTCTTCACAGTTGTGATTTTCTTGTGGAATTGGAGCAAAAAATAGAATTCTGTATTGATTGCAGCTTTTCAGTAATCCTTGATAGAGCTAGTGAAGATTTGGAAATTATAAGATCCGAGAGAAAGAGGAACATGGATAATCTAGAATTATTGTTGAAGCAATTATCAACTCAAGTTTTTCAAGGTGGAGGATTTGACAGGCCTTTAGTGACCAAGCGCCGTTCAAGATTGTGTGTTGCTGTGAGAGCTTCACATAGATCTTTGCTTCCTAATTCCGTAATCCTAGATACAAGCAGTAGTGGATCTACATACTTCATGGAACCTAAAGAGGCAGTTGAGCTAAACAACATGGAAGTTAAACTTTCTAGTTCTGAGAAGGTTGAGGAGCAAACAATTTTGAGTTTGCTTACATCTGAAATAGCAGAATCTAATATGAAAATAAAGCACTTATTAGATAAAATATTGGAAATCGATCTTGCATTTGCAAGGGCTGCTCATGCTCAGTGGATGGGTGCTGCC</gDNA_template>
            <first_frame> N  G  Q  L  T  V  L  P  C  N  P  P  F  P  P  F  *  S  N  W  I  T  H  P  K  A  Q  Q  K  F  K  L  Y  L  Q  *  I  F  S  T  S  T  A  N  A  N  P  T  I  S  S  A  F  I  F  L  R  L  T  A  R  S  V  T  V  V  Q  L  G  S  P  S  V  S  H  P  S  Q  L  T  E  S  N  S  P  S  H  C  N  P  K  P  *  S  F  *  N  G  P  P  C  V  N  S  S  P  L  S  R  P  H  P  W  D  T  P  Q  H  N  L  L  G  F  R  W  V  K  L  V  K  R  A  V  D  F  S  L  R  P  R  P  R  W  L  Y  L  G  R  W  I  L  P  E  L  K  I  F  P  Q  L  L  M  L  P  L  Q  A  V  Y  S  R  F  V  N  F  A  L  *  N  E  P  W  Q  R  R  D  F  C  S  N  S  W  R  R  L  I  F  L  K   : V  N  S  K  W  R  S  M  S  H  V  V  V  M  D  S  H  E  V  P  F  K  *  Y  *  A  V  S  L  E  C  L  I  I  F  K  Q  V  L  F  S  E  G  N  S  S  Q  L  *  F  S  C  G  I  G  A  K  N  R  I  L  Y  *  L  Q  L  F  S  N  P  *  *  S  *  *  R  F  G  N  Y  K  I  R  E  K  E  E  H  G  *  S  R  I  I  V  E  A  I  I  N  S  S  F  S  R  W  R  I  *  Q  A  F  S  D  Q  A  P  F  K  I  V  C  C  C  E  S  F  T  *  I  F  A  S  *  F  R  N  P  R  Y  K  Q  *  W  I  Y  I  L  H  G  T  *  R  G  S  *  A  K  Q  H  G  S  *  T  F  *  F  *  E  G  *  G  A  N  N  F  E  F  A  Y  I  *  N  S  R  I  *  Y  E  N  K  A  L  I  R  *  N  I  G  N  R  S  C  I  C  K  G  C  S  C  S  V  D  G  C  C  </first_frame>
            <second_frame>  M  D  S  L  L  Y  C  R  V  T  H  P  S  L  H  F  R  V  T  G  *  R  T  Q  K  L  N  K  N  S  N  F  I  F  N  E  S  F  Q  L  Q  L  Q  M  Q  I  Q  Q  F  L  Q  H  S  S  S  S  A  S  Q  L  A  L  *  P  S  Y  N  *  V  L  R  P  F  L  I  R  V  N  S  Q  S  Q  T  R  R  V  T  A  I  R  N  L  E  A  S  R  M  A  R  R  V  S  T  A  L  R  F  H  V  H  I  H  G  I  R  R  S  T  I  C  S  D  S  G  G  *  N  S  *  R  E  Q  *  T  S  L  S  D  L  G  R  G  G  C  T  S  A  V  G  F  Y  R  N  *  R  Y  F  P  N  C  *  C  F  R  C  R  R  C  T  L  D  S  *  T  L  L  C  E  T  N  L  G  S  G  E  I  F  A  P  T  V  G  G  D  *  F  F  *  K  :  L  T  Q  N  G  E  A  C  L  M  W  *  *  W  I  L  M  K  F  H  L  N  S  I  E  Q  F  H  *  N  V  *  L  S  S  N  R  Y  S  S  L  K  E  I  L  H  S  C  D  F  L  V  E  L  E  Q  K  I  E  F  C  I  D  C  S  F  S  V  I  L  D  R  A  S  E  D  L  E  I  I  R  S  E  R  K  R  N  M  D  N  L  E  L  L  L  K  Q  L  S  T  Q  V  F  Q  G  G  G  F  D  R  P  L  V  T  K  R  R  S  R  L  C  V  A  V  R  A  S  H  R  S  L  L  P  N  S  V  I  L  D  T  S  S  S  G  S  T  Y  F  M  E  P  K  E  A  V  E  L  N  N  M  E  V  K  L  S  S  S  E  K  V  E  E  Q  T  I  L  S  L  L  T  S  E  I  A  E  S  N  M  K  I  K  H  L  L  D  K  I  L  E  I  D  L  A  F  A  R  A  A  H  A  Q  W  M  G  A  A </second_frame>
            <third_frame>   W  T  A  Y  C  I  A  V  *  P  T  L  P  S  I  L  E  *  L  D  N  A  P  K  S  S  T  K  I  Q  T  L  S  S  M  N  L  F  N  F  N  C  K  C  K  S  N  N  F  F  S  I  H  L  P  P  P  H  S  S  L  C  N  R  R  T  T  R  F  S  V  R  F  S  S  E  S  T  H  R  V  K  L  A  E  S  L  Q  S  E  T  L  K  L  L  E  W  P  A  V  C  Q  Q  L  S  A  F  T  S  T  S  M  G  Y  A  A  A  Q  S  A  R  I  P  V  G  K  T  R  E  E  S  S  R  L  L  S  Q  T  S  A  A  V  A  V  P  R  P  L  D  F  T  G  I  E  D  I  S  P  I  V  D  A  S  V  A  G  G  V  L  S  I  R  E  L  C  S  V  K  R  T  L  A  A  A  R  F  L  L  Q  Q  L  E  E  I  D  F  S  E  S :   *  L  K  M  A  K  H  V  S  C  G  S  D  G  F  S  *  S  S  I  *  I  V  L  S  S  F  I  R  M  S  N  Y  L  Q  T  G  T  L  L  *  R  K  F  F  T  V  V  I  F  L  W  N  W  S  K  K  *  N  S  V  L  I  A  A  F  Q  *  S  L  I  E  L  V  K  I  W  K  L  *  D  P  R  E  R  G  T  W  I  I  *  N  Y  C  *  S  N  Y  Q  L  K  F  F  K  V  E  D  L  T  G  L  *  *  P  S  A  V  Q  D  C  V  L  L  *  E  L  H  I  D  L  C  F  L  I  P  *  S  *  I  Q  A  V  V  D  L  H  T  S  W  N  L  K  R  Q  L  S  *  T  T  W  K  L  N  F  L  V  L  R  R  L  R  S  K  Q  F  *  V  C  L  H  L  K  *  Q  N  L  I  *  K  *  S  T  Y  *  I  K  Y  W  K  S  I  L  H  L  Q  G  L  L  M  L  S  G  W  V  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34606" stop="35157"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSSNRYSSLKEILHSCDFLVELEQKIEFCIDCSFSVILDRASEDLEIIRSERKRNMDNLELLLKQLSTQVFQGGGFDRPLVTKRRSRLCVAVRASHRSLLPNSVILDTSSSGSTYFMEPKEAVELNNMEVKLSSSEKVEEQTILSLLTSEIAESNMKIKHLLDKILEIDLAFARAAHAQWMGAA</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33303" stop="33844"/>
                    <exon start="34510" stop="34513"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>543</number_coding_nucleotides>
                  <number_encoded_amino_acids>181</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LDNAPKSSTKIQTLSSMNLFNFNCKCKSNNFFSIHLPPPHSSLCNRRTTRFSVRFSSESTHRVKLAESLQSETLKLLEWPAVCQQLSAFTSTSMGYAAAQSARIPVGKTREESSRLLSQTSAAVAVPRPLDFTGIEDISPIVDASVAGGVLSIRELCSVKRTLAAARFLLQQLEEIDFSES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="38803" PGL_stop="40618"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38803" e_stop="39455"/>
            <exon e_start="39660" e_stop="39900"/>
            <exon e_start="40058" e_stop="40178"/>
            <exon e_start="40264" e_stop="40602"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.931" e_score="1.000"/>
          <exon-intron don_prob="0.954" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.061" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="38803" e_stop="39455" e_length="653"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.931">
            <gDNA_intron_boundary i_start="39456" i_stop="39659" i_length="204"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="39660" e_stop="39900" e_length="241"/>
          </exon>
          <intron i_serial="2" don_prob="0.954" acc_prob="0.997">
            <gDNA_intron_boundary i_start="39901" i_stop="40057" i_length="157"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="40058" e_stop="40178" e_length="121"/>
          </exon>
          <intron i_serial="3" don_prob="0.975" acc_prob="0.061">
            <gDNA_intron_boundary i_start="40179" i_stop="40263" i_length="85"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="40264" e_stop="40602" e_length="339"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38803" stop="39455"/>
              <exon start="39660" stop="39900"/>
              <exon start="40058" stop="40178"/>
              <exon start="40264" stop="40602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563253" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAGCCTTCAGTATTTAGACAAAACTTTCTTGGCTTCTTTCTTCTATACAATAAAAAAAATAATATTCCTAATTTAAAACAAGTATGTTTGATTTTCTGGATTTTCAAAACCATGTTCCAAGAAAAAGATAATTTTATTTATACAAAATTTTCATAACGTAAAATATTTAACTACTAATAAGTGCCATTTGAACAATGGATAGATGTGACAGATGTACTGTCAACATTATTGATGCCACGTCAGTACTTTATTTTCGGTTACAACAGTCATTTGGATAAGCATCTCAAGAGTTTGTACATTTCGTAGTTTGACTTGATACGAAATTTTATTTATTTTTTATTTTTTTTGAAATTTGTAATTTATATAAATAGTCATAATATTGTTGTTGCTGCTGGGAATTTTATGGTTAATGAAAAAAGTTTCTAGCTTTTATTTGAGTAGTAAACATGTTGGCTGTGTTTGAGCAATCTATTGGGAAGCCACCTTCAGAGCTGAGCGTTGCTCAGACAGATAGACAGAAAAAGGAGGCTAAAACAAAGGAAGAGATTGAAGAAAGTTTCAAATCATGGAAGCCAGACTCAACTTTTTACCACCTTTCAAATGGGAATTTCATGGCTTTTTCTCATGGAAATGAAAACCCTTTCCATCCAAG : GTCTATTGTGGTGATGGATGACATATTCTGCATCTTTTCTGGTGGTTTAGACAACACTTTTGATTTGAGGAAATATTATGGTCTTTCAAGACAAGCTACAGAAGCTATGATAATGGTTGAGGCTTACAAAGTTTTAAGGGATCGGGCGCCATACCCTCCTGATCAAGTCATCAAAGAACTTGAAGGCAAATTTGCTTTCATTCTCTTTGACTATAAAGCCTCCACTCTTTTTCTTGCTAGG : GATCGCGATGGAAGTGTGCCGTTACACTGGGGAACTGCTACAGATGGATCATTAGTATGTTCTGATGATTCAGAGTTCATTCAAGCTTCTTGTGGGAAATTGTATACCCCGTTTCCTCCAG : GTTGTATCTTCATAAGTGACACTGGGCTAATAAGCTTTGATCATCCAATGCACAAAGTAAAAGGAATTGCGCGTGAAGATGATGAAGGAAATGTCAATGCTGTGATTTTCCAGGTGGACTTGTACACCAAACTCCACAGCATTCCGCGCAGGGGAAGTGCTGCGAATTGGGCTGGTGCTACTACGGTTGAATGAAACGGAAGATTTGAAACTTTGACGATCTTCCCAAGTTGAGTCATTATTGTAATAATGTTAAATCACAAACGGTATGCTACTTTGTGGCAATCTTGTTAAATAATCTGAAATCATATGTTGCTGCAATAATAATATTTCCATCATC</gDNA_template>
            <first_frame> S  A  F  S  I  *  T  K  L  S  W  L  L  S  S  I  Q  *  K  K  *  Y  S  *  F  K  T  S  M  F  D  F  L  D  F  Q  N  H  V  P  R  K  R  *  F  Y  L  Y  K  I  F  I  T  *  N  I  *  L  L  I  S  A  I  *  T  M  D  R  C  D  R  C  T  V  N  I  I  D  A  T  S  V  L  Y  F  R  L  Q  Q  S  F  G  *  A  S  Q  E  F  V  H  F  V  V  *  L  D  T  K  F  Y  L  F  F  I  F  F  E  I  C  N  L  Y  K  *  S  *  Y  C  C  C  C  W  E  F  Y  G  *  *  K  K  F  L  A  F  I  *  V  V  N  M  L  A  V  F  E  Q  S  I  G  K  P  P  S  E  L  S  V  A  Q  T  D  R  Q  K  K  E  A  K  T  K  E  E  I  E  E  S  F  K  S  W  K  P  D  S  T  F  Y  H  L  S  N  G  N  F  M  A  F  S  H  G  N  E  N  P  F  H  P  R :   S  I  V  V  M  D  D  I  F  C  I  F  S  G  G  L  D  N  T  F  D  L  R  K  Y  Y  G  L  S  R  Q  A  T  E  A  M  I  M  V  E  A  Y  K  V  L  R  D  R  A  P  Y  P  P  D  Q  V  I  K  E  L  E  G  K  F  A  F  I  L  F  D  Y  K  A  S  T  L  F  L  A  R  :  D  R  D  G  S  V  P  L  H  W  G  T  A  T  D  G  S  L  V  C  S  D  D  S  E  F  I  Q  A  S  C  G  K  L  Y  T  P  F  P  P   : G  C  I  F  I  S  D  T  G  L  I  S  F  D  H  P  M  H  K  V  K  G  I  A  R  E  D  D  E  G  N  V  N  A  V  I  F  Q  V  D  L  Y  T  K  L  H  S  I  P  R  R  G  S  A  A  N  W  A  G  A  T  T  V  E  *  N  G  R  F  E  T  L  T  I  F  P  S  *  V  I  I  V  I  M  L  N  H  K  R  Y  A  T  L  W  Q  S  C  *  I  I  *  N  H  M  L  L  Q  *  *  Y  F  H  H  </first_frame>
            <second_frame>  Q  P  S  V  F  R  Q  N  F  L  G  F  F  L  L  Y  N  K  K  N  N  I  P  N  L  K  Q  V  C  L  I  F  W  I  F  K  T  M  F  Q  E  K  D  N  F  I  Y  T  K  F  S  *  R  K  I  F  N  Y  *  *  V  P  F  E  Q  W  I  D  V  T  D  V  L  S  T  L  L  M  P  R  Q  Y  F  I  F  G  Y  N  S  H  L  D  K  H  L  K  S  L  Y  I  S  *  F  D  L  I  R  N  F  I  Y  F  L  F  F  L  K  F  V  I  Y  I  N  S  H  N  I  V  V  A  A  G  N  F  M  V  N  E  K  S  F  *  L  L  F  E  *  *  T  C  W  L  C  L  S  N  L  L  G  S  H  L  Q  S  *  A  L  L  R  Q  I  D  R  K  R  R  L  K  Q  R  K  R  L  K  K  V  S  N  H  G  S  Q  T  Q  L  F  T  T  F  Q  M  G  I  S  W  L  F  L  M  E  M  K  T  L  S  I  Q   : G  L  L  W  *  W  M  T  Y  S  A  S  F  L  V  V  *  T  T  L  L  I  *  G  N  I  M  V  F  Q  D  K  L  Q  K  L  *  *  W  L  R  L  T  K  F  *  G  I  G  R  H  T  L  L  I  K  S  S  K  N  L  K  A  N  L  L  S  F  S  L  T  I  K  P  P  L  F  F  L  L  G :   I  A  M  E  V  C  R  Y  T  G  E  L  L  Q  M  D  H  *  Y  V  L  M  I  Q  S  S  F  K  L  L  V  G  N  C  I  P  R  F  L  Q  :  V  V  S  S  *  V  T  L  G  *  *  A  L  I  I  Q  C  T  K  *  K  E  L  R  V  K  M  M  K  E  M  S  M  L  *  F  S  R  W  T  C  T  P  N  S  T  A  F  R  A  G  E  V  L  R  I  G  L  V  L  L  R  L  N  E  T  E  D  L  K  L  *  R  S  S  Q  V  E  S  L  L  *  *  C  *  I  T  N  G  M  L  L  C  G  N  L  V  K  *  S  E  I  I  C  C  C  N  N  N  I  S  I  I </second_frame>
            <third_frame>   S  L  Q  Y  L  D  K  T  F  L  A  S  F  F  Y  T  I  K  K  I  I  F  L  I  *  N  K  Y  V  *  F  S  G  F  S  K  P  C  S  K  K  K  I  I  L  F  I  Q  N  F  H  N  V  K  Y  L  T  T  N  K  C  H  L  N  N  G  *  M  *  Q  M  Y  C  Q  H  Y  *  C  H  V  S  T  L  F  S  V  T  T  V  I  W  I  S  I  S  R  V  C  T  F  R  S  L  T  *  Y  E  I  L  F  I  F  Y  F  F  *  N  L  *  F  I  *  I  V  I  I  L  L  L  L  L  G  I  L  W  L  M  K  K  V  S  S  F  Y  L  S  S  K  H  V  G  C  V  *  A  I  Y  W  E  A  T  F  R  A  E  R  C  S  D  R  *  T  E  K  G  G  *  N  K  G  R  D  *  R  K  F  Q  I  M  E  A  R  L  N  F  L  P  P  F  K  W  E  F  H  G  F  F  S  W  K  *  K  P  F  P  S  K  :  V  Y  C  G  D  G  *  H  I  L  H  L  F  W  W  F  R  Q  H  F  *  F  E  E  I  L  W  S  F  K  T  S  Y  R  S  Y  D  N  G  *  G  L  Q  S  F  K  G  S  G  A  I  P  S  *  S  S  H  Q  R  T  *  R  Q  I  C  F  H  S  L  *  L  *  S  L  H  S  F  S  C  *   : G  S  R  W  K  C  A  V  T  L  G  N  C  Y  R  W  I  I  S  M  F  *  *  F  R  V  H  S  S  F  L  W  E  I  V  Y  P  V  S  S  R :   L  Y  L  H  K  *  H  W  A  N  K  L  *  S  S  N  A  Q  S  K  R  N  C  A  *  R  *  *  R  K  C  Q  C  C  D  F  P  G  G  L  V  H  Q  T  P  Q  H  S  A  Q  G  K  C  C  E  L  G  W  C  Y  Y  G  *  M  K  R  K  I  *  N  F  D  D  L  P  K  L  S  H  Y  C  N  N  V  K  S  Q  T  V  C  Y  F  V  A  I  L  L  N  N  L  K  S  Y  V  A  A  I  I  I  F  P  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="39241" stop="39455"/>
                    <exon start="39660" stop="39900"/>
                    <exon start="40058" stop="40178"/>
                    <exon start="40264" stop="40457"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>768</number_coding_nucleotides>
                  <number_encoded_amino_acids>256</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VVNMLAVFEQSIGKPPSELSVAQTDRQKKEAKTKEEIEESFKSWKPDSTFYHLSNGNFMAFSHGNENPFHPRSIVVMDDIFCIFSGGLDNTFDLRKYYGLSRQATEAMIMVEAYKVLRDRAPYPPDQVIKELEGKFAFILFDYKASTLFLARDRDGSVPLHWGTATDGSLVCSDDSEFIQASCGKLYTPFPPGCIFISDTGLISFDHPMHKVKGIAREDDEGNVNAVIFQVDLYTKLHSIPRRGSAANWAGATTVE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="39740" e_stop="39900"/>
            <exon e_start="40058" e_stop="40618"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.954" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="39740" e_stop="39900" e_length="161"/>
          </exon>
          <intron i_serial="1" don_prob="0.954" acc_prob="0.997">
            <gDNA_intron_boundary i_start="39901" i_stop="40057" i_length="157"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="40058" e_stop="40618" e_length="561"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39740" stop="39900"/>
              <exon start="40058" stop="40618"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563254" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCTTTCAAGACAAGCTACAGAAGCTATGATAATGGTTGAGGCTTACAAAGTTTTAAGGGATCGGGCGCCATACCCTCCTGATCAAGTCATCAAAGAACTTGAAGGCAAATTTGCTTTCATTCTCTTTGACTATAAAGCCTCCACTCTTTTTCTTGCTAGG : GATCGCGATGGAAGTGTGCCGTTACACTGGGGAACTGCTACAGATGGATCATTAGTATGTTCTGATGATTCAGAGTTCATTCAAGCTTCTTGTGGGAAATTGTATACCCCGTTTCCTCCAGGTTTCTTAATCAAATCCTCTTTTAAGTTTAATCTGATGTTTTTGGAGATCCAGCGGAATTCAATGTGTTAAAGCTGATTGTACAGGTTGTATCTTCATAAGTGACACTGGGCTAATAAGCTTTGATCATCCAATGCACAAAGTAAAAGGAATTGCGCGTGAAGATGATGAAGGAAATGTCAATGCTGTGATTTTCCAGGTGGACTTGTACACCAAACTCCACAGCATTCCGCGCAGGGGAAGTGCTGCGAATTGGGCTGGTGCTACTACGGTTGAATGAAACGGAAGATTTGAAACTTTGACGATCTTCCCAAGTTGAGTCATTATTGTAATAATGTTAAATCACAAACGGTATGCTACTTTGTGGCAATCTTGTTAAATAATCTGAAATCATATGTTGCTGCAATAATAATATTTCCATCATCAATCGACTGTTTCTTA</gDNA_template>
            <first_frame> V  F  Q  D  K  L  Q  K  L  *  *  W  L  R  L  T  K  F  *  G  I  G  R  H  T  L  L  I  K  S  S  K  N  L  K  A  N  L  L  S  F  S  L  T  I  K  P  P  L  F  F  L  L  G :   I  A  M  E  V  C  R  Y  T  G  E  L  L  Q  M  D  H  *  Y  V  L  M  I  Q  S  S  F  K  L  L  V  G  N  C  I  P  R  F  L  Q  V  S  *  S  N  P  L  L  S  L  I  *  C  F  W  R  S  S  G  I  Q  C  V  K  A  D  C  T  G  C  I  F  I  S  D  T  G  L  I  S  F  D  H  P  M  H  K  V  K  G  I  A  R  E  D  D  E  G  N  V  N  A  V  I  F  Q  V  D  L  Y  T  K  L  H  S  I  P  R  R  G  S  A  A  N  W  A  G  A  T  T  V  E  *  N  G  R  F  E  T  L  T  I  F  P  S  *  V  I  I  V  I  M  L  N  H  K  R  Y  A  T  L  W  Q  S  C  *  I  I  *  N  H  M  L  L  Q  *  *  Y  F  H  H  Q  S  T  V  S   </first_frame>
            <second_frame>  S  F  K  T  S  Y  R  S  Y  D  N  G  *  G  L  Q  S  F  K  G  S  G  A  I  P  S  *  S  S  H  Q  R  T  *  R  Q  I  C  F  H  S  L  *  L  *  S  L  H  S  F  S  C  *   : G  S  R  W  K  C  A  V  T  L  G  N  C  Y  R  W  I  I  S  M  F  *  *  F  R  V  H  S  S  F  L  W  E  I  V  Y  P  V  S  S  R  F  L  N  Q  I  L  F  *  V  *  S  D  V  F  G  D  P  A  E  F  N  V  L  K  L  I  V  Q  V  V  S  S  *  V  T  L  G  *  *  A  L  I  I  Q  C  T  K  *  K  E  L  R  V  K  M  M  K  E  M  S  M  L  *  F  S  R  W  T  C  T  P  N  S  T  A  F  R  A  G  E  V  L  R  I  G  L  V  L  L  R  L  N  E  T  E  D  L  K  L  *  R  S  S  Q  V  E  S  L  L  *  *  C  *  I  T  N  G  M  L  L  C  G  N  L  V  K  *  S  E  I  I  C  C  C  N  N  N  I  S  I  I  N  R  L  F  L  </second_frame>
            <third_frame>   L  S  R  Q  A  T  E  A  M  I  M  V  E  A  Y  K  V  L  R  D  R  A  P  Y  P  P  D  Q  V  I  K  E  L  E  G  K  F  A  F  I  L  F  D  Y  K  A  S  T  L  F  L  A  R  :  D  R  D  G  S  V  P  L  H  W  G  T  A  T  D  G  S  L  V  C  S  D  D  S  E  F  I  Q  A  S  C  G  K  L  Y  T  P  F  P  P  G  F  L  I  K  S  S  F  K  F  N  L  M  F  L  E  I  Q  R  N  S  M  C  *  S  *  L  Y  R  L  Y  L  H  K  *  H  W  A  N  K  L  *  S  S  N  A  Q  S  K  R  N  C  A  *  R  *  *  R  K  C  Q  C  C  D  F  P  G  G  L  V  H  Q  T  P  Q  H  S  A  Q  G  K  C  C  E  L  G  W  C  Y  Y  G  *  M  K  R  K  I  *  N  F  D  D  L  P  K  L  S  H  Y  C  N  N  V  K  S  Q  T  V  C  Y  F  V  A  I  L  L  N  N  L  K  S  Y  V  A  A  I  I  I  F  P  S  S  I  D  C  F  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="39742" stop="39900"/>
                    <exon start="40058" stop="40249"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>348</number_coding_nucleotides>
                  <number_encoded_amino_acids>116</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSRQATEAMIMVEAYKVLRDRAPYPPDQVIKELEGKFAFILFDYKASTLFLARDRDGSVPLHWGTATDGSLVCSDDSEFIQASCGKLYTPFPPGFLIKSSFKFNLMFLEIQRNSMC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="42221" PGL_stop="41115"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="42221" e_stop="41115"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="42221" e_stop="41115" e_length="1107"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42221" stop="41115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563015" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAATAATCAAATCAAAGTCTTTTTCTTAAATAAACTTAGCTAAAATGGCAGCTCCAACATGTTTGAACATTTGTTTTATGGTTTTGCTAAGCTTAGCAATATGCTCTGCCCAGCCTATTGAAGTTGATCATCATCACAACCACAAAGCTCACGCTTTGAGTAATATCGGAGGAGGCAGTGATGGCGGATTAGGCATTGGTGGTGGTGGAGGTGGATTTGGCATTGGCTTTGGTGTTGGTGTTGGCGTTGGTGGTGGAAGATTTGGGTTTGGCATTGGTGGAGGTGTCCCTGGTTATATACCTGGCTTTGATTTCCCAGTCTATTCCCCTGATTGTGGTTATGTGTGTCTTGTTAATAATCCTAGTGGAGAAGTCACAGAATTCAAAATCTCAGGATTATCACACTTCACCAAACCATACAGATGCAAACCAGGACCAAACATGCGCGGAGACAAAGATTTTAACCATGAACTTCTTCTAAACTTTGTTTCTACAATGCTGGACAAACAACAACATCTACACAGTGGAGATGTAGGTCACCATGTAGGGGGAGCTAGACGTTTAGGATTTGGTCGTGGAAGTAGCAGAGGAACAGGTGGTTCTGATACCTCTGATCAGTATGCTACTGAGGACCCCGGTTGGAGTATTGAGGGATGTGGTTATGTATGTCCAGGCAACAGTCCTAGTGGAGGACTCACTGAATTCCATATCTCAGGAATATCACATTTCAGTGAACCTTACAGATGTAGCCCAGATGTATGTGACACTGAAGAATGTGGTGAGTTTCTTCTACGCTTTGTTTCTCCAATGCATAACAAACACGAGAACCAACATGGTCATCAGTCAGAGCAGCAAGACAAGCATGAGAACAAACACGGTCATCAGTTAGACCAGCACGACACACATGAGAACCAACATGGTCATCAATCAGAGAAGCAAGAGGAAGATATCACAAACAATATCCCCGACCCACCCACACCCCAATCCTGAATCCAAGAAAAAGAAACTTAATATGTAATAATGTTATGTAGCTTCAGCCAAAAAACAGTATATACTGTCTAAGAAGCTAACTATTTACAAGGAACTTAATAAAACTTGTTTTAGTTGA</gDNA_template>
            <first_frame> Q  *  S  N  Q  S  L  F  L  K  *  T  *  L  K  W  Q  L  Q  H  V  *  T  F  V  L  W  F  C  *  A  *  Q  Y  A  L  P  S  L  L  K  L  I  I  I  T  T  T  K  L  T  L  *  V  I  S  E  E  A  V  M  A  D  *  A  L  V  V  V  E  V  D  L  A  L  A  L  V  L  V  L  A  L  V  V  E  D  L  G  L  A  L  V  E  V  S  L  V  I  Y  L  A  L  I  S  Q  S  I  P  L  I  V  V  M  C  V  L  L  I  I  L  V  E  K  S  Q  N  S  K  S  Q  D  Y  H  T  S  P  N  H  T  D  A  N  Q  D  Q  T  C  A  E  T  K  I  L  T  M  N  F  F  *  T  L  F  L  Q  C  W  T  N  N  N  I  Y  T  V  E  M  *  V  T  M  *  G  E  L  D  V  *  D  L  V  V  E  V  A  E  E  Q  V  V  L  I  P  L  I  S  M  L  L  R  T  P  V  G  V  L  R  D  V  V  M  Y  V  Q  A  T  V  L  V  E  D  S  L  N  S  I  S  Q  E  Y  H  I  S  V  N  L  T  D  V  A  Q  M  Y  V  T  L  K  N  V  V  S  F  F  Y  A  L  F  L  Q  C  I  T  N  T  R  T  N  M  V  I  S  Q  S  S  K  T  S  M  R  T  N  T  V  I  S  *  T  S  T  T  H  M  R  T  N  M  V  I  N  Q  R  S  K  R  K  I  S  Q  T  I  S  P  T  H  P  H  P  N  P  E  S  K  K  K  K  L  N  M  *  *  C  Y  V  A  S  A  K  K  Q  Y  I  L  S  K  K  L  T  I  Y  K  E  L  N  K  T  C  F  S  * </first_frame>
            <second_frame>  N  N  Q  I  K  V  F  F  L  N  K  L  S  *  N  G  S  S  N  M  F  E  H  L  F  Y  G  F  A  K  L  S  N  M  L  C  P  A  Y  *  S  *  S  S  S  Q  P  Q  S  S  R  F  E  *  Y  R  R  R  Q  *  W  R  I  R  H  W  W  W  W  R  W  I  W  H  W  L  W  C  W  C  W  R  W  W  W  K  I  W  V  W  H  W  W  R  C  P  W  L  Y  T  W  L  *  F  P  S  L  F  P  *  L  W  L  C  V  S  C  *  *  S  *  W  R  S  H  R  I  Q  N  L  R  I  I  T  L  H  Q  T  I  Q  M  Q  T  R  T  K  H  A  R  R  Q  R  F  *  P  *  T  S  S  K  L  C  F  Y  N  A  G  Q  T  T  T  S  T  Q  W  R  C  R  S  P  C  R  G  S  *  T  F  R  I  W  S  W  K  *  Q  R  N  R  W  F  *  Y  L  *  S  V  C  Y  *  G  P  R  L  E  Y  *  G  M  W  L  C  M  S  R  Q  Q  S  *  W  R  T  H  *  I  P  Y  L  R  N  I  T  F  Q  *  T  L  Q  M  *  P  R  C  M  *  H  *  R  M  W  *  V  S  S  T  L  C  F  S  N  A  *  Q  T  R  E  P  T  W  S  S  V  R  A  A  R  Q  A  *  E  Q  T  R  S  S  V  R  P  A  R  H  T  *  E  P  T  W  S  S  I  R  E  A  R  G  R  Y  H  K  Q  Y  P  R  P  T  H  T  P  I  L  N  P  R  K  R  N  L  I  C  N  N  V  M  *  L  Q  P  K  N  S  I  Y  C  L  R  S  *  L  F  T  R  N  L  I  K  L  V  L  V   </second_frame>
            <third_frame>   I  I  K  S  K  S  F  S  *  I  N  L  A  K  M  A  A  P  T  C  L  N  I  C  F  M  V  L  L  S  L  A  I  C  S  A  Q  P  I  E  V  D  H  H  H  N  H  K  A  H  A  L  S  N  I  G  G  G  S  D  G  G  L  G  I  G  G  G  G  G  G  F  G  I  G  F  G  V  G  V  G  V  G  G  G  R  F  G  F  G  I  G  G  G  V  P  G  Y  I  P  G  F  D  F  P  V  Y  S  P  D  C  G  Y  V  C  L  V  N  N  P  S  G  E  V  T  E  F  K  I  S  G  L  S  H  F  T  K  P  Y  R  C  K  P  G  P  N  M  R  G  D  K  D  F  N  H  E  L  L  L  N  F  V  S  T  M  L  D  K  Q  Q  H  L  H  S  G  D  V  G  H  H  V  G  G  A  R  R  L  G  F  G  R  G  S  S  R  G  T  G  G  S  D  T  S  D  Q  Y  A  T  E  D  P  G  W  S  I  E  G  C  G  Y  V  C  P  G  N  S  P  S  G  G  L  T  E  F  H  I  S  G  I  S  H  F  S  E  P  Y  R  C  S  P  D  V  C  D  T  E  E  C  G  E  F  L  L  R  F  V  S  P  M  H  N  K  H  E  N  Q  H  G  H  Q  S  E  Q  Q  D  K  H  E  N  K  H  G  H  Q  L  D  Q  H  D  T  H  E  N  Q  H  G  H  Q  S  E  K  Q  E  E  D  I  T  N  N  I  P  D  P  P  T  P  Q  S  *  I  Q  E  K  E  T  *  Y  V  I  M  L  C  S  F  S  Q  K  T  V  Y  T  V  *  E  A  N  Y  L  Q  G  T  *  *  N  L  F  *  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42192" stop="41233"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>957</number_coding_nucleotides>
                  <number_encoded_amino_acids>319</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INLAKMAAPTCLNICFMVLLSLAICSAQPIEVDHHHNHKAHALSNIGGGSDGGLGIGGGGGGFGIGFGVGVGVGGGRFGFGIGGGVPGYIPGFDFPVYSPDCGYVCLVNNPSGEVTEFKISGLSHFTKPYRCKPGPNMRGDKDFNHELLLNFVSTMLDKQQHLHSGDVGHHVGGARRLGFGRGSSRGTGGSDTSDQYATEDPGWSIEGCGYVCPGNSPSGGLTEFHISGISHFSEPYRCSPDVCDTEECGEFLLRFVSPMHNKHENQHGHQSEQQDKHENKHGHQLDQHDTHENQHGHQSEKQEEDITNNIPDPPTPQS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="45442" PGL_stop="50026"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="45442" e_stop="45723"/>
            <exon e_start="47896" e_stop="47970"/>
            <exon e_start="49528" e_stop="50026"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.833" acc_prob="0.996" e_score="0.996"/>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="45442" e_stop="45723" e_length="282"/>
          </exon>
          <intron i_serial="1" don_prob="0.833" acc_prob="0.996">
            <gDNA_intron_boundary i_start="45724" i_stop="47895" i_length="2172"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="47896" e_stop="47970" e_length="75"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="47971" i_stop="49527" i_length="1557"/>
          </intron>
          <exon e_serial="3" e_score="0.992">
            <gDNA_exon_boundary e_start="49528" e_stop="50026" e_length="499"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45442" stop="45723"/>
              <exon start="47896" stop="47970"/>
              <exon start="49528" stop="50026"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575611" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGCTTTTATATAAAACAGCATAAAAGAGGAGAAATTTCGTATTGTTCTTTGAGGGTATTTACTTCACTTCTCATTGAGAAATAGAGAATCTGAAAGAATCGAGAATGGGCGGAGGAGGATCAGTGAAGGAAGTTCAATCGAAGGCGGAGCTTGATAAGATTGTCGCCGACGGATCACCGGCGATTTTGCACTTTTGGGCATCATGGTGTGAAGCTTCTAAGCACATGGACCAAGTCTTTTCGCATCTTTCTACTGATTTCCCACATGCCCATTTTCTAAGA : GTTGAAGCTGAAGAACAGCCTGAGATATCTGAGCTGCACTCTGTTTCTGCTGTACCTTACTTTGTCTTCTTCAAG : GAAGGGAAAGCTGTTGATACATTGGAAGGGGCCGATCCATCTAGTTTGGCTAACAAGGTTGCAAAAATTGCTGGGTCAATCACTCCTGGGGATCCTGCCGCTCCTGCTAGCCTAGGAATGGCTGCAGGTCCCTCTGTTCTTGAAGCAATTCAGGAGTTGTCTAGAGAAAACGGTGCCCCTCAAGTGTCAAGTTCTGGTCTTGATGATCGGCTAACAAAGCGACTTCAGCAGCTGGTTTCTTCTCATCCAGTATTGCTTTTCATGAAAGGGACCCCAGAAGAACCCAAGTGTGGTTTTAGTCAGAAAGTCGTTGATATCTTGAAGAAAGAGAAGGTCAAATTTGGAAGTTTTGATATTCTGATGGACAGTGAGGTCCGTGAGGGTCTGAAGAAATTTTCCAATTGGCCAACATATCCTCAACTGTACTGCAAGGGTGAACTTCTTGGTGGTTGTGATATTGTTATAACTATGCATGAGAGTGGTGAACTTACAGATGTTT</gDNA_template>
            <first_frame> R  L  L  Y  K  T  A  *  K  R  R  N  F  V  L  F  F  E  G  I  Y  F  T  S  H  *  E  I  E  N  L  K  E  S  R  M  G  G  G  G  S  V  K  E  V  Q  S  K  A  E  L  D  K  I  V  A  D  G  S  P  A  I  L  H  F  W  A  S  W  C  E  A  S  K  H  M  D  Q  V  F  S  H  L  S  T  D  F  P  H  A  H  F  L  R  :  V  E  A  E  E  Q  P  E  I  S  E  L  H  S  V  S  A  V  P  Y  F  V  F  F  K  :  E  G  K  A  V  D  T  L  E  G  A  D  P  S  S  L  A  N  K  V  A  K  I  A  G  S  I  T  P  G  D  P  A  A  P  A  S  L  G  M  A  A  G  P  S  V  L  E  A  I  Q  E  L  S  R  E  N  G  A  P  Q  V  S  S  S  G  L  D  D  R  L  T  K  R  L  Q  Q  L  V  S  S  H  P  V  L  L  F  M  K  G  T  P  E  E  P  K  C  G  F  S  Q  K  V  V  D  I  L  K  K  E  K  V  K  F  G  S  F  D  I  L  M  D  S  E  V  R  E  G  L  K  K  F  S  N  W  P  T  Y  P  Q  L  Y  C  K  G  E  L  L  G  G  C  D  I  V  I  T  M  H  E  S  G  E  L  T  D  V  </first_frame>
            <second_frame>  G  F  Y  I  K  Q  H  K  R  G  E  I  S  Y  C  S  L  R  V  F  T  S  L  L  I  E  K  *  R  I  *  K  N  R  E  W  A  E  E  D  Q  *  R  K  F  N  R  R  R  S  L  I  R  L  S  P  T  D  H  R  R  F  C  T  F  G  H  H  G  V  K  L  L  S  T  W  T  K  S  F  R  I  F  L  L  I  S  H  M  P  I  F  *  E :   L  K  L  K  N  S  L  R  Y  L  S  C  T  L  F  L  L  Y  L  T  L  S  S  S  R :   K  G  K  L  L  I  H  W  K  G  P  I  H  L  V  W  L  T  R  L  Q  K  L  L  G  Q  S  L  L  G  I  L  P  L  L  L  A  *  E  W  L  Q  V  P  L  F  L  K  Q  F  R  S  C  L  E  K  T  V  P  L  K  C  Q  V  L  V  L  M  I  G  *  Q  S  D  F  S  S  W  F  L  L  I  Q  Y  C  F  S  *  K  G  P  Q  K  N  P  S  V  V  L  V  R  K  S  L  I  S  *  R  K  R  R  S  N  L  E  V  L  I  F  *  W  T  V  R  S  V  R  V  *  R  N  F  P  I  G  Q  H  I  L  N  C  T  A  R  V  N  F  L  V  V  V  I  L  L  *  L  C  M  R  V  V  N  L  Q  M  F </second_frame>
            <third_frame>   A  F  I  *  N  S  I  K  E  E  K  F  R  I  V  L  *  G  Y  L  L  H  F  S  L  R  N  R  E  S  E  R  I  E  N  G  R  R  R  I  S  E  G  S  S  I  E  G  G  A  *  *  D  C  R  R  R  I  T  G  D  F  A  L  L  G  I  M  V  *  S  F  *  A  H  G  P  S  L  F  A  S  F  Y  *  F  P  T  C  P  F  S  K   : S  *  S  *  R  T  A  *  D  I  *  A  A  L  C  F  C  C  T  L  L  C  L  L  Q   : G  R  E  S  C  *  Y  I  G  R  G  R  S  I  *  F  G  *  Q  G  C  K  N  C  W  V  N  H  S  W  G  S  C  R  S  C  *  P  R  N  G  C  R  S  L  C  S  *  S  N  S  G  V  V  *  R  K  R  C  P  S  S  V  K  F  W  S  *  *  S  A  N  K  A  T  S  A  A  G  F  F  S  S  S  I  A  F  H  E  R  D  P  R  R  T  Q  V  W  F  *  S  E  S  R  *  Y  L  E  E  R  E  G  Q  I  W  K  F  *  Y  S  D  G  Q  *  G  P  *  G  S  E  E  I  F  Q  L  A  N  I  S  S  T  V  L  Q  G  *  T  S  W  W  L  *  Y  C  Y  N  Y  A  *  E  W  *  T  Y  R  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="45520" stop="45723"/>
                    <exon start="47896" stop="47970"/>
                    <exon start="49528" stop="50025"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>777</number_coding_nucleotides>
                  <number_encoded_amino_acids>259</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EIENLKESRMGGGGSVKEVQSKAELDKIVADGSPAILHFWASWCEASKHMDQVFSHLSTDFPHAHFLRVEAEEQPEISELHSVSAVPYFVFFKEGKAVDTLEGADPSSLANKVAKIAGSITPGDPAAPASLGMAAGPSVLEAIQELSRENGAPQVSSSGLDDRLTKRLQQLVSSHPVLLFMKGTPEEPKCGFSQKVVDILKKEKVKFGSFDILMDSEVREGLKKFSNWPTYPQLYCKGELLGGCDIVITMHESGELTDV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="50121" PGL_stop="51019"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="50121" e_stop="51019"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="50121" e_stop="51019" e_length="899"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50121" stop="51019"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U563568" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGTACTGCCTTGACTACTCGTCTTGCAGGTCTGATAAACTCTAGCCCAGTTATGCTGTTTATGAAAGGAACAGTTGATGAACCCCGGTGTGGATTCAGCAGAAAGGTGGTGGATATTCTCAAACAGGAGAAAGTGGAGTTTGAGACTTTTGACATTCTTTCTGATGATGAAGTCCGTCAAGGACTGAAAGTTTATTCCAACTGGTCTAGTTATCCACAGCTGTACATAAAGGGTGAACTTATTGGTGGATCAGACATTGTACTGGAGATGCAAAAGAGCGGTGAGTTTAGGAAGGTTCTGACTGAGAAGGGGATACACCAGAAAGTTAGTCTTGAAGACCGTTTAAAGAATCTACTGAATTCCTCACCTGTAATGCTCTTCATGAAGGGTACACCAGATTCTCCAAGATGTGGTTTCAGCTCCAAGGTGGTAAATGCCTTGAAGGAGGAAGGGGTTGATTTTGGATCCTTTGATATTCTATCCGACGAAGAAGTAAGGCAGGGACTGAAGACCTTCTCTAACTGGCCAACTTATCCGCAGCTGTATTACAAAGGCGAACTTGTAGGAGGATGTGATATCGTGCTGGAATTACATAGCGGGGGTGAATTGAAGTCAACATTATCTGAATAGAAGAACCCCCAACCAGTCCAGGTTGCGCGTATCAGACATAACATGTTAGCTGTGAGGCCTTACATGTTGTGTCGACGTGATTTTGATGGTATTTGAACAAGAATTTCATGTTATGAGAGCAGCACTTTTAGAGATGGTTACTGTTACTCTAGTCTCTAATTTGTCTGAGTCCTGAGTTTGATATTTATTCAGTGTCATGAATTATGTATGCTTCTGTAGAGGACCTTATTTTTCTTATCTTAGTTTGCCTATGGTTGATTCTGCTTTC</gDNA_template>
            <first_frame> E  Y  C  L  D  Y  S  S  C  R  S  D  K  L  *  P  S  Y  A  V  Y  E  R  N  S  *  *  T  P  V  W  I  Q  Q  K  G  G  G  Y  S  Q  T  G  E  S  G  V  *  D  F  *  H  S  F  *  *  *  S  P  S  R  T  E  S  L  F  Q  L  V  *  L  S  T  A  V  H  K  G  *  T  Y  W  W  I  R  H  C  T  G  D  A  K  E  R  *  V  *  E  G  S  D  *  E  G  D  T  P  E  S  *  S  *  R  P  F  K  E  S  T  E  F  L  T  C  N  A  L  H  E  G  Y  T  R  F  S  K  M  W  F  Q  L  Q  G  G  K  C  L  E  G  G  R  G  *  F  W  I  L  *  Y  S  I  R  R  R  S  K  A  G  T  E  D  L  L  *  L  A  N  L  S  A  A  V  L  Q  R  R  T  C  R  R  M  *  Y  R  A  G  I  T  *  R  G  *  I  E  V  N  I  I  *  I  E  E  P  P  T  S  P  G  C  A  Y  Q  T  *  H  V  S  C  E  A  L  H  V  V  S  T  *  F  *  W  Y  L  N  K  N  F  M  L  *  E  Q  H  F  *  R  W  L  L  L  L  *  S  L  I  C  L  S  P  E  F  D  I  Y  S  V  S  *  I  M  Y  A  S  V  E  D  L  I  F  L  I  L  V  C  L  W  L  I  L  L   </first_frame>
            <second_frame>  S  T  A  L  T  T  R  L  A  G  L  I  N  S  S  P  V  M  L  F  M  K  G  T  V  D  E  P  R  C  G  F  S  R  K  V  V  D  I  L  K  Q  E  K  V  E  F  E  T  F  D  I  L  S  D  D  E  V  R  Q  G  L  K  V  Y  S  N  W  S  S  Y  P  Q  L  Y  I  K  G  E  L  I  G  G  S  D  I  V  L  E  M  Q  K  S  G  E  F  R  K  V  L  T  E  K  G  I  H  Q  K  V  S  L  E  D  R  L  K  N  L  L  N  S  S  P  V  M  L  F  M  K  G  T  P  D  S  P  R  C  G  F  S  S  K  V  V  N  A  L  K  E  E  G  V  D  F  G  S  F  D  I  L  S  D  E  E  V  R  Q  G  L  K  T  F  S  N  W  P  T  Y  P  Q  L  Y  Y  K  G  E  L  V  G  G  C  D  I  V  L  E  L  H  S  G  G  E  L  K  S  T  L  S  E  *  K  N  P  Q  P  V  Q  V  A  R  I  R  H  N  M  L  A  V  R  P  Y  M  L  C  R  R  D  F  D  G  I  *  T  R  I  S  C  Y  E  S  S  T  F  R  D  G  Y  C  Y  S  S  L  *  F  V  *  V  L  S  L  I  F  I  Q  C  H  E  L  C  M  L  L  *  R  T  L  F  F  L  S  *  F  A  Y  G  *  F  C  F  </second_frame>
            <third_frame>   V  L  P  *  L  L  V  L  Q  V  *  *  T  L  A  Q  L  C  C  L  *  K  E  Q  L  M  N  P  G  V  D  S  A  E  R  W  W  I  F  S  N  R  R  K  W  S  L  R  L  L  T  F  F  L  M  M  K  S  V  K  D  *  K  F  I  P  T  G  L  V  I  H  S  C  T  *  R  V  N  L  L  V  D  Q  T  L  Y  W  R  C  K  R  A  V  S  L  G  R  F  *  L  R  R  G  Y  T  R  K  L  V  L  K  T  V  *  R  I  Y  *  I  P  H  L  *  C  S  S  *  R  V  H  Q  I  L  Q  D  V  V  S  A  P  R  W  *  M  P  *  R  R  K  G  L  I  L  D  P  L  I  F  Y  P  T  K  K  *  G  R  D  *  R  P  S  L  T  G  Q  L  I  R  S  C  I  T  K  A  N  L  *  E  D  V  I  S  C  W  N  Y  I  A  G  V  N  *  S  Q  H  Y  L  N  R  R  T  P  N  Q  S  R  L  R  V  S  D  I  T  C  *  L  *  G  L  T  C  C  V  D  V  I  L  M  V  F  E  Q  E  F  H  V  M  R  A  A  L  L  E  M  V  T  V  T  L  V  S  N  L  S  E  S  *  V  *  Y  L  F  S  V  M  N  Y  V  C  F  C  R  G  P  Y  F  S  Y  L  S  L  P  M  V  D  S  A  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50122" stop="50751"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>627</number_coding_nucleotides>
                  <number_encoded_amino_acids>209</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>STALTTRLAGLINSSPVMLFMKGTVDEPRCGFSRKVVDILKQEKVEFETFDILSDDEVRQGLKVYSNWSSYPQLYIKGELIGGSDIVLEMQKSGEFRKVLTEKGIHQKVSLEDRLKNLLNSSPVMLFMKGTPDSPRCGFSSKVVNALKEEGVDFGSFDILSDEEVRQGLKTFSNWPTYPQLYYKGELVGGCDIVLELHSGGELKSTLSE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="52777" PGL_stop="52164"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52777" e_stop="52164"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="52777" e_stop="52164" e_length="614"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52777" stop="52164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604294" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTATCATACTCATGAATCAGTTGATACATCCGACCTTCCTTTATTTTCTGTGGATTATCTCCAACTTCTCCCACATTTCCTTTGTAGTCTTACATCTATAGGTGTTTTTGAACTCTTCCATGCTCAAAGCACAGTAAAGTATGTGTTTGGCTCTAGCATTGGTTTGCAGGACATCCATTTGTTCTCTTGTATAGGATGCCTCGTCGTCATGTTCCTTTCCTTCCTGATCACCAGGAATTGGTAGTGGTCCGTTCTGTATGATTAGCCATGATTGAAGGTCAACTGATTGCACATACACACTCATTCTAGCCTTCCAATGACGATAATGTTTCCCATCGAAGTATTGTGGCCTTGAATCTTCTTCTTCTGGTTGAAGATATCCTTCTGCAATGTGATAACTAGCCATTGGTGTTTTCTCACTTTCTGCTATGCAAAAACAAACTTGTCAGAGGCTTAAGAAAATATGCTGGAACATAAGTCGAATGTTCCAATGGCAGTCACAATTATATTATATATATACAAAATATGATTTTAAATTGGAAAAATTATGTGGTTAAGCAATCTTATACTACTTAATCGGTAGTTATATCTATAGCTTGCTATAATTTTCACT</gDNA_template>
            <first_frame> S  I  I  L  M  N  Q  L  I  H  P  T  F  L  Y  F  L  W  I  I  S  N  F  S  H  I  S  F  V  V  L  H  L  *  V  F  L  N  S  S  M  L  K  A  Q  *  S  M  C  L  A  L  A  L  V  C  R  T  S  I  C  S  L  V  *  D  A  S  S  S  C  S  F  P  S  *  S  P  G  I  G  S  G  P  F  C  M  I  S  H  D  *  R  S  T  D  C  T  Y  T  L  I  L  A  F  Q  *  R  *  C  F  P  S  K  Y  C  G  L  E  S  S  S  S  G  *  R  Y  P  S  A  M  *  *  L  A  I  G  V  F  S  L  S  A  M  Q  K  Q  T  C  Q  R  L  K  K  I  C  W  N  I  S  R  M  F  Q  W  Q  S  Q  L  Y  Y  I  Y  T  K  Y  D  F  K  L  E  K  L  C  G  *  A  I  L  Y  Y  L  I  G  S  Y  I  Y  S  L  L  *  F  S   </first_frame>
            <second_frame>  V  S  Y  S  *  I  S  *  Y  I  R  P  S  F  I  F  C  G  L  S  P  T  S  P  T  F  P  L  *  S  Y  I  Y  R  C  F  *  T  L  P  C  S  K  H  S  K  V  C  V  W  L  *  H  W  F  A  G  H  P  F  V  L  L  Y  R  M  P  R  R  H  V  P  F  L  P  D  H  Q  E  L  V  V  V  R  S  V  *  L  A  M  I  E  G  Q  L  I  A  H  T  H  S  F  *  P  S  N  D  D  N  V  S  H  R  S  I  V  A  L  N  L  L  L  L  V  E  D  I  L  L  Q  C  D  N  *  P  L  V  F  S  H  F  L  L  C  K  N  K  L  V  R  G  L  R  K  Y  A  G  T  *  V  E  C  S  N  G  S  H  N  Y  I  I  Y  I  Q  N  M  I  L  N  W  K  N  Y  V  V  K  Q  S  Y  T  T  *  S  V  V  I  S  I  A  C  Y  N  F  H  </second_frame>
            <third_frame>   Y  H  T  H  E  S  V  D  T  S  D  L  P  L  F  S  V  D  Y  L  Q  L  L  P  H  F  L  C  S  L  T  S  I  G  V  F  E  L  F  H  A  Q  S  T  V  K  Y  V  F  G  S  S  I  G  L  Q  D  I  H  L  F  S  C  I  G  C  L  V  V  M  F  L  S  F  L  I  T  R  N  W  *  W  S  V  L  Y  D  *  P  *  L  K  V  N  *  L  H  I  H  T  H  S  S  L  P  M  T  I  M  F  P  I  E  V  L  W  P  *  I  F  F  F  W  L  K  I  S  F  C  N  V  I  T  S  H  W  C  F  L  T  F  C  Y  A  K  T  N  L  S  E  A  *  E  N  M  L  E  H  K  S  N  V  P  M  A  V  T  I  I  L  Y  I  Y  K  I  *  F  *  I  G  K  I  M  W  L  S  N  L  I  L  L  N  R  *  L  Y  L  *  L  A  I  I  F  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52775" stop="52533"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YHTHESVDTSDLPLFSVDYLQLLPHFLCSLTSIGVFELFHAQSTVKYVFGSSIGLQDIHLFSCIGCLVVMFLSFLITRNW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="68201" PGL_stop="68644"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68201" e_stop="68644"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="68201" e_stop="68644" e_length="444"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68201" stop="68644"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U574605" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAATGATGACAATTACAATTTATTACTCAATACAATGAGTCATAATTTAAAGTTTTAGGAGTTTTAATTAAGTAAAGGCCCATATCCCTTCCTAAAAATCTTTACTTATTGTAAATAAAGTAGGTAATTAGTAGTAGTTATGGAGAGTGTGGTGACTTCTGATGATCATTTTGTTGGAACCTAGCGGAGGAAGCACACGTGAAAGTTACACTGCAAGTTGCATGAGCCAAAGTAGTATACTGATGGATTGGCCTAGAAAGGAAAATAGGCAGATGAGCCAATAGAGAACAAACACATTCGCTATCGACAGCTTTCATCCACCTACAACATTCCTCTTCTACTGGAGTTTGTGTATTATACCCAAGATTCGTAGAAGGTGTAGGTGCAGGTGCAGGCGCGGGTGCTGGAGAGGATACAGGTGCAGGTCCTGGTGGAGGCAAAGG</gDNA_template>
            <first_frame> Q  M  M  T  I  T  I  Y  Y  S  I  Q  *  V  I  I  *  S  F  R  S  F  N  *  V  K  A  H  I  P  S  *  K  S  L  L  I  V  N  K  V  G  N  *  *  *  L  W  R  V  W  *  L  L  M  I  I  L  L  E  P  S  G  G  S  T  R  E  S  Y  T  A  S  C  M  S  Q  S  S  I  L  M  D  W  P  R  K  E  N  R  Q  M  S  Q  *  R  T  N  T  F  A  I  D  S  F  H  P  P  T  T  F  L  F  Y  W  S  L  C  I  I  P  K  I  R  R  R  C  R  C  R  C  R  R  G  C  W  R  G  Y  R  C  R  S  W  W  R  Q  R </first_frame>
            <second_frame>  K  *  *  Q  L  Q  F  I  T  Q  Y  N  E  S  *  F  K  V  L  G  V  L  I  K  *  R  P  I  S  L  P  K  N  L  Y  L  L  *  I  K  *  V  I  S  S  S  Y  G  E  C  G  D  F  *  *  S  F  C  W  N  L  A  E  E  A  H  V  K  V  T  L  Q  V  A  *  A  K  V  V  Y  *  W  I  G  L  E  R  K  I  G  R  *  A  N  R  E  Q  T  H  S  L  S  T  A  F  I  H  L  Q  H  S  S  S  T  G  V  C  V  L  Y  P  R  F  V  E  G  V  G  A  G  A  G  A  G  A  G  E  D  T  G  A  G  P  G  G  G  K   </second_frame>
            <third_frame>   N  D  D  N  Y  N  L  L  L  N  T  M  S  H  N  L  K  F  *  E  F  *  L  S  K  G  P  Y  P  F  L  K  I  F  T  Y  C  K  *  S  R  *  L  V  V  V  M  E  S  V  V  T  S  D  D  H  F  V  G  T  *  R  R  K  H  T  *  K  L  H  C  K  L  H  E  P  K  *  Y  T  D  G  L  A  *  K  G  K  *  A  D  E  P  I  E  N  K  H  I  R  Y  R  Q  L  S  S  T  Y  N  I  P  L  L  L  E  F  V  Y  Y  T  Q  D  S  *  K  V  *  V  Q  V  Q  A  R  V  L  E  R  I  Q  V  Q  V  L  V  E  A  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0005F12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="75397" PGL_stop="73713"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75397" e_stop="75284"/>
            <exon e_start="74220" e_stop="73713"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.960" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="75397" e_stop="75284" e_length="114"/>
          </exon>
          <intron i_serial="1" don_prob="0.960" acc_prob="0.997">
            <gDNA_intron_boundary i_start="75283" i_stop="74221" i_length="1063"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="74220" e_stop="73713" e_length="508"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75397" stop="75284"/>
              <exon start="74220" stop="73713"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565177" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTAAAGAAACCTATTTTCTTCTCTATTTCCTCTGTTTAATCACCTGGGATTCTCCATTCGAAGCTTGAAAGTCTAAAACTTTGGTTGTTTTTTCAACCCTTTTGCTTGATTG : ATTTGGGAAGACCCTTGGGTTGAACAAGTGCTCAGAAACAAATCTCATGGCCTTGGAGCAGTATTATTCAAACGAGTGGAAATCGATCCCTACTCCAGAATCATCAGACTCAGAGAAGACTTCTGCCTGCTTTGATTGCAACATCTGCTTGGACTTTGCCCGCGATCCGGTTATTACTCTTTGTGGCCATCTCTATTGTTGGCCCTGCATTTACAAGTGGCTTCACTTTCAGAGTGATTCTCTGTCTTCGGATGAACGCCCTCAATGTCCAGTTTGCAAGGCTGAAATCTCCCAAACAGATTTAGTCCCTCTTTACGGGCGTGGGGAAACACTACCTGAATCTGAGCCTGAAAACAAGCTCACTCTAAAAGTGCCTCCCAGGCCACCTGCTTTCAGTCCATCATCCATGTCAAACTCCTTTAACCCTTCTCAGCAACCACCACATCCTAATGCCTATGATCCCCATGCCAGTTACCTCAACAGTTCATCGCCTCCTTCATTCAGTCTC</gDNA_template>
            <first_frame> L  *  R  N  L  F  S  S  L  F  P  L  F  N  H  L  G  F  S  I  R  S  L  K  V  *  N  F  G  C  F  F  N  P  F  A  *  L  :  I  W  E  D  P  W  V  E  Q  V  L  R  N  K  S  H  G  L  G  A  V  L  F  K  R  V  E  I  D  P  Y  S  R  I  I  R  L  R  E  D  F  C  L  L  *  L  Q  H  L  L  G  L  C  P  R  S  G  Y  Y  S  L  W  P  S  L  L  L  A  L  H  L  Q  V  A  S  L  S  E  *  F  S  V  F  G  *  T  P  S  M  S  S  L  Q  G  *  N  L  P  N  R  F  S  P  S  L  R  A  W  G  N  T  T  *  I  *  A  *  K  Q  A  H  S  K  S  A  S  Q  A  T  C  F  Q  S  I  I  H  V  K  L  L  *  P  F  S  A  T  T  T  S  *  C  L  *  S  P  C  Q  L  P  Q  Q  F  I  A  S  F  I  Q  S  </first_frame>
            <second_frame>  F  K  E  T  Y  F  L  L  Y  F  L  C  L  I  T  W  D  S  P  F  E  A  *  K  S  K  T  L  V  V  F  S  T  L  L  L  D  * :   F  G  K  T  L  G  L  N  K  C  S  E  T  N  L  M  A  L  E  Q  Y  Y  S  N  E  W  K  S  I  P  T  P  E  S  S  D  S  E  K  T  S  A  C  F  D  C  N  I  C  L  D  F  A  R  D  P  V  I  T  L  C  G  H  L  Y  C  W  P  C  I  Y  K  W  L  H  F  Q  S  D  S  L  S  S  D  E  R  P  Q  C  P  V  C  K  A  E  I  S  Q  T  D  L  V  P  L  Y  G  R  G  E  T  L  P  E  S  E  P  E  N  K  L  T  L  K  V  P  P  R  P  P  A  F  S  P  S  S  M  S  N  S  F  N  P  S  Q  Q  P  P  H  P  N  A  Y  D  P  H  A  S  Y  L  N  S  S  S  P  P  S  F  S  L </second_frame>
            <third_frame>   L  K  K  P  I  F  F  S  I  S  S  V  *  S  P  G  I  L  H  S  K  L  E  S  L  K  L  W  L  F  F  Q  P  F  C  L  I   : D  L  G  R  P  L  G  *  T  S  A  Q  K  Q  I  S  W  P  W  S  S  I  I  Q  T  S  G  N  R  S  L  L  Q  N  H  Q  T  Q  R  R  L  L  P  A  L  I  A  T  S  A  W  T  L  P  A  I  R  L  L  L  F  V  A  I  S  I  V  G  P  A  F  T  S  G  F  T  F  R  V  I  L  C  L  R  M  N  A  L  N  V  Q  F  A  R  L  K  S  P  K  Q  I  *  S  L  F  T  G  V  G  K  H  Y  L  N  L  S  L  K  T  S  S  L  *  K  C  L  P  G  H  L  L  S  V  H  H  P  C  Q  T  P  L  T  L  L  S  N  H  H  I  L  M  P  M  I  P  M  P  V  T  S  T  V  H  R  L  L  H  S  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74219" stop="73713"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>507</number_coding_nucleotides>
                  <number_encoded_amino_acids>169</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FGKTLGLNKCSETNLMALEQYYSNEWKSIPTPESSDSEKTSACFDCNICLDFARDPVITLCGHLYCWPCIYKWLHFQSDSLSSDERPQCPVCKAEISQTDLVPLYGRGETLPESEPENKLTLKVPPRPPAFSPSSMSNSFNPSQQPPHPNAYDPHASYLNSSSPPSFSL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="77917" PGL_stop="81323"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="77917" e_stop="78034"/>
            <exon e_start="78673" e_stop="78806"/>
            <exon e_start="78895" e_stop="78932"/>
            <exon e_start="79714" e_stop="79773"/>
            <exon e_start="79937" e_stop="80011"/>
            <exon e_start="80846" e_stop="81323"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.988" e_score="0.992"/>
          <exon-intron don_prob="0.718" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.933" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="77917" e_stop="78034" e_length="118"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.988">
            <gDNA_intron_boundary i_start="78035" i_stop="78672" i_length="638"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="78673" e_stop="78806" e_length="134"/>
          </exon>
          <intron i_serial="2" don_prob="0.718" acc_prob="0.976">
            <gDNA_intron_boundary i_start="78807" i_stop="78894" i_length="88"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="78895" e_stop="78932" e_length="38"/>
          </exon>
          <intron i_serial="3" don_prob="0.952" acc_prob="0.933">
            <gDNA_intron_boundary i_start="78933" i_stop="79713" i_length="781"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="79714" e_stop="79773" e_length="60"/>
          </exon>
          <intron i_serial="4" don_prob="0.981" acc_prob="0.959">
            <gDNA_intron_boundary i_start="79774" i_stop="79936" i_length="163"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="79937" e_stop="80011" e_length="75"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="80012" i_stop="80845" i_length="834"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="80846" e_stop="81323" e_length="478"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77917" stop="78034"/>
              <exon start="78673" stop="78806"/>
              <exon start="78895" stop="78932"/>
              <exon start="79714" stop="79773"/>
              <exon start="79937" stop="80011"/>
              <exon start="80846" stop="81323"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586709" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77926" stop="78034"/>
              <exon start="78673" stop="78806"/>
              <exon start="78895" stop="78932"/>
              <exon start="79714" stop="79773"/>
              <exon start="79937" stop="80011"/>
              <exon start="80846" stop="81239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572407" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTTCTAGTAAATTTGAGCGGATGTCCCCTTATACCCTAATAATTTTGGAATTTTAATTTGAAATTCTGTTTACAATTGTGCTCTCGTCATCTCCAGTGGAATCAACACTTTTGCAG : GTTGAGAGGTGGACGTTAAAATAAATTGAAAATGAACAACTCTTCTGCAGGGCCATCCTCAAAAGCTAGAGTAGGAGCATCACAACCTTCAGAAAGTTCACTTAAGAGGAAACGTGGCATGTTTCAGAAAGATT : TGCAACACATGATGTATGGTTTTGGAGATGATAGCAAT : CCACTTCCAGAAACTGTGTCACTTGTTGAAGACATCGTGGTGGATTATGTCACTGATATG : GTGCACAAAGCTCAGGATATTGCAACCAAAAGGGGGAAGCTTTTGACCGAGGACTTTCTGTTCTTAATTAGAAAG : GACTTGCCGAAACTTAACCGGTGTACAGAACTGTTGTCCATGAATGAGGAGCTGAAACAAGCTCGGAAGGCTTTCGAGGTCGATGAAGAGAAATTGGCTTCACATCAGTGAAGGGGAAGTGTGATCTTAGTTCAGAATGACAAATTGAGTGGCACCGTAGGACCAGTATACAGTTTAACCTACTCTGGAGTAAATAGCCTGCTTGTTCTCATTTTTCGCTAGCACAATCGATGTCTGAGTCACCTTGTAGCTGCGTTTACTCTTGCACAATAGATCTTCGATGCTGAAATCAGTTTCTTAAGTGTTCTATTGGTGCATTGAACGCCACCTGTGTGTAGTTTGGCAGTTCTAAAGATGGTGGTGTCAGGTATTTATAATTTCATCAATCTACTTGTTTGTAGATCTGCACAAACTGATGGAATGAGTTGTAAGTTAACTCTGAGTAGTCACCCAATTAGATTGATTTTGATCTGTTTGC</gDNA_template>
            <first_frame> N  F  *  *  I  *  A  D  V  P  L  Y  P  N  N  F  G  I  L  I  *  N  S  V  Y  N  C  A  L  V  I  S  S  G  I  N  T  F  A   : G  *  E  V  D  V  K  I  N  *  K  *  T  T  L  L  Q  G  H  P  Q  K  L  E  *  E  H  H  N  L  Q  K  V  H  L  R  G  N  V  A  C  F  R  K  I  :  C  N  T  *  C  M  V  L  E  M  I  A  I :   H  F  Q  K  L  C  H  L  L  K  T  S  W  W  I  M  S  L  I  W :   C  T  K  L  R  I  L  Q  P  K  G  G  S  F  *  P  R  T  F  C  S  *  L  E  R :   T  C  R  N  L  T  G  V  Q  N  C  C  P  *  M  R  S  *  N  K  L  G  R  L  S  R  S  M  K  R  N  W  L  H  I  S  E  G  E  V  *  S  *  F  R  M  T  N  *  V  A  P  *  D  Q  Y  T  V  *  P  T  L  E  *  I  A  C  L  F  S  F  F  A  S  T  I  D  V  *  V  T  L  *  L  R  L  L  L  H  N  R  S  S  M  L  K  S  V  S  *  V  F  Y  W  C  I  E  R  H  L  C  V  V  W  Q  F  *  R  W  W  C  Q  V  F  I  I  S  S  I  Y  L  F  V  D  L  H  K  L  M  E  *  V  V  S  *  L  *  V  V  T  Q  L  D  *  F  *  S  V  C </first_frame>
            <second_frame>  I  S  S  K  F  E  R  M  S  P  Y  T  L  I  I  L  E  F  *  F  E  I  L  F  T  I  V  L  S  S  S  P  V  E  S  T  L  L  Q  :  V  E  R  W  T  L  K  *  I  E  N  E  Q  L  F  C  R  A  I  L  K  S  *  S  R  S  I  T  T  F  R  K  F  T  *  E  E  T  W  H  V  S  E  R  F :   A  T  H  D  V  W  F  W  R  *  *  Q   : S  T  S  R  N  C  V  T  C  *  R  H  R  G  G  L  C  H  *  Y   : G  A  Q  S  S  G  Y  C  N  Q  K  G  E  A  F  D  R  G  L  S  V  L  N  *  K   : G  L  A  E  T  *  P  V  Y  R  T  V  V  H  E  *  G  A  E  T  S  S  E  G  F  R  G  R  *  R  E  I  G  F  T  S  V  K  G  K  C  D  L  S  S  E  *  Q  I  E  W  H  R  R  T  S  I  Q  F  N  L  L  W  S  K  *  P  A  C  S  H  F  S  L  A  Q  S  M  S  E  S  P  C  S  C  V  Y  S  C  T  I  D  L  R  C  *  N  Q  F  L  K  C  S  I  G  A  L  N  A  T  C  V  *  F  G  S  S  K  D  G  G  V  R  Y  L  *  F  H  Q  S  T  C  L  *  I  C  T  N  *  W  N  E  L  *  V  N  S  E  *  S  P  N  *  I  D  F  D  L  F   </second_frame>
            <third_frame>   F  L  V  N  L  S  G  C  P  L  I  P  *  *  F  W  N  F  N  L  K  F  C  L  Q  L  C  S  R  H  L  Q  W  N  Q  H  F  C  R :   L  R  G  G  R  *  N  K  L  K  M  N  N  S  S  A  G  P  S  S  K  A  R  V  G  A  S  Q  P  S  E  S  S  L  K  R  K  R  G  M  F  Q  K  D   : L  Q  H  M  M  Y  G  F  G  D  D  S  N  :  P  L  P  E  T  V  S  L  V  E  D  I  V  V  D  Y  V  T  D  M  :  V  H  K  A  Q  D  I  A  T  K  R  G  K  L  L  T  E  D  F  L  F  L  I  R  K  :  D  L  P  K  L  N  R  C  T  E  L  L  S  M  N  E  E  L  K  Q  A  R  K  A  F  E  V  D  E  E  K  L  A  S  H  Q  *  R  G  S  V  I  L  V  Q  N  D  K  L  S  G  T  V  G  P  V  Y  S  L  T  Y  S  G  V  N  S  L  L  V  L  I  F  R  *  H  N  R  C  L  S  H  L  V  A  A  F  T  L  A  Q  *  I  F  D  A  E  I  S  F  L  S  V  L  L  V  H  *  T  P  P  V  C  S  L  A  V  L  K  M  V  V  S  G  I  Y  N  F  I  N  L  L  V  C  R  S  A  Q  T  D  G  M  S  C  K  L  T  L  S  S  H  P  I  R  L  I  L  I  C  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78692" stop="78806"/>
                    <exon start="78895" stop="78932"/>
                    <exon start="79714" stop="79773"/>
                    <exon start="79937" stop="80011"/>
                    <exon start="80846" stop="80956"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>396</number_coding_nucleotides>
                  <number_encoded_amino_acids>132</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKLKMNNSSAGPSSKARVGASQPSESSLKRKRGMFQKDLQHMMYGFGDDSNPLPETVSLVEDIVVDYVTDMVHKAQDIATKRGKLLTEDFLFLIRKDLPKLNRCTELLSMNEELKQARKAFEVDEEKLASHQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="85078" PGL_stop="84651"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85078" e_stop="84651"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="85078" e_stop="84651" e_length="428"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85078" stop="84651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604169" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGCAGTACCCACAGACCAGATGTGGGACTTTCAATCATCAGGAGATAGAAACTGTCATTTTCAGCTGCAGATACATCTTCACGACTTTCAATCATCAGGTGGGAAGTCCTCATCTGAGGCATTATCCAGAAATGAACCAAGAGTTTTTCTCAGAAAACTGAATGCTTTATCATCCTGTCAAGCAAAAAAGGAGGACGGTTAACTTGGCGGTATGAGAATGTATGCAGTGTGTGACAGAGATAAGGTGCATCAAAGAAGTTAACCTGCTTCTTTTTCTTCAGCGACTCCTTTAGTTCAGAAATTCGTTTTCTAGAGTCTTGCTCAAGATCAGATATCATGCTCTTCTCTTTCTTCCCTGAATTAATGTCATAAAAATCTGTCACAGGCATCCTTATCATTCAATAAATATATAATACAGAGTTCCTGT</gDNA_template>
            <first_frame> W  Q  Y  P  Q  T  R  C  G  T  F  N  H  Q  E  I  E  T  V  I  F  S  C  R  Y  I  F  T  T  F  N  H  Q  V  G  S  P  H  L  R  H  Y  P  E  M  N  Q  E  F  F  S  E  N  *  M  L  Y  H  P  V  K  Q  K  R  R  T  V  N  L  A  V  *  E  C  M  Q  C  V  T  E  I  R  C  I  K  E  V  N  L  L  L  F  L  Q  R  L  L  *  F  R  N  S  F  S  R  V  L  L  K  I  R  Y  H  A  L  L  F  L  P  *  I  N  V  I  K  I  C  H  R  H  P  Y  H  S  I  N  I  *  Y  R  V  P   </first_frame>
            <second_frame>  G  S  T  H  R  P  D  V  G  L  S  I  I  R  R  *  K  L  S  F  S  A  A  D  T  S  S  R  L  S  I  I  R  W  E  V  L  I  *  G  I  I  Q  K  *  T  K  S  F  S  Q  K  T  E  C  F  I  I  L  S  S  K  K  G  G  R  L  T  W  R  Y  E  N  V  C  S  V  *  Q  R  *  G  A  S  K  K  L  T  C  F  F  F  F  S  D  S  F  S  S  E  I  R  F  L  E  S  C  S  R  S  D  I  M  L  F  S  F  F  P  E  L  M  S  *  K  S  V  T  G  I  L  I  I  Q  *  I  Y  N  T  E  F  L  </second_frame>
            <third_frame>   A  V  P  T  D  Q  M  W  D  F  Q  S  S  G  D  R  N  C  H  F  Q  L  Q  I  H  L  H  D  F  Q  S  S  G  G  K  S  S  S  E  A  L  S  R  N  E  P  R  V  F  L  R  K  L  N  A  L  S  S  C  Q  A  K  K  E  D  G  *  L  G  G  M  R  M  Y  A  V  C  D  R  D  K  V  H  Q  R  S  *  P  A  S  F  S  S  A  T  P  L  V  Q  K  F  V  F  *  S  L  A  Q  D  Q  I  S  C  S  S  L  S  S  L  N  *  C  H  K  N  L  S  Q  A  S  L  S  F  N  K  Y  I  I  Q  S  S  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85076" stop="84876"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AVPTDQMWDFQSSGDRNCHFQLQIHLHDFQSSGGKSSSEALSRNEPRVFLRKLNALSSCQAKKEDG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="88953" PGL_stop="99913"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88953" e_stop="89031"/>
            <exon e_start="89666" e_stop="89799"/>
            <exon e_start="89888" e_stop="89925"/>
            <exon e_start="90714" e_stop="90773"/>
            <exon e_start="96927" e_stop="97174"/>
            <exon e_start="98496" e_stop="98570"/>
            <exon e_start="99413" e_stop="99913"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.461" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.943" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="88953" e_stop="89031" e_length="79"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.992">
            <gDNA_intron_boundary i_start="89032" i_stop="89665" i_length="634"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89666" e_stop="89799" e_length="134"/>
          </exon>
          <intron i_serial="2" don_prob="0.461" acc_prob="0.973">
            <gDNA_intron_boundary i_start="89800" i_stop="89887" i_length="88"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="89888" e_stop="89925" e_length="38"/>
          </exon>
          <intron i_serial="3" don_prob="0.952" acc_prob="0.981">
            <gDNA_intron_boundary i_start="89926" i_stop="90713" i_length="788"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="90714" e_stop="90773" e_length="60"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="90774" i_stop="96926" i_length="6153"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="96927" e_stop="97174" e_length="248"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.943">
            <gDNA_intron_boundary i_start="97175" i_stop="98495" i_length="1321"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="98496" e_stop="98570" e_length="75"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="98571" i_stop="99412" i_length="842"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="99413" e_stop="99913" e_length="501"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88953" stop="89031"/>
              <exon start="89666" stop="89799"/>
              <exon start="89888" stop="89925"/>
              <exon start="90714" stop="90773"/>
              <exon start="96927" stop="97174"/>
              <exon start="98496" stop="98570"/>
              <exon start="99413" stop="99913"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586710" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATAATTTTGGAATTTCAATTTGAAATTCTGTTTACAATTGTGCTCTCGTCATCTCCAGTGGAATCAACACTTTTGCAG : GTTGAGAGGTGGACGTTAAAATAAATTGAAAATGAACAACTCTTCTGCAGGGCCATCCTCAAAAGCTAGAGTAGGAGCATCACAACCTTCAGAAAGTTCACTTAAGAGGAAACGTGGCATGTTTCAGAAAGATT : TGCAACACATGATGTATGGTTTTGGAGATGATAGCAAT : CCACTTCCAGAAACTGTGTCACTTGTTGAAGACATCGTGGTGGATGATGTCACTGATATG : ACTATCTCTCCAGAAGAAGATACAATGGAGAAAATACTAGCTATGATGACAAACCTTTGTCAAAAGGTGGAGAAGATAGAAAACGAAGTACAAGTATTAATAGAAACATTTAAAAACCAGCAGCATGACGGAGCTAGAAGGTGACGTTGGGAAACACCTAAAAACCCATAACAAAACAATATATACAGCTGCAGGAAGCACATCTACAGGAAGCACATATGCAGGAGGAACATCTACAAAAAAAGAAG : GTGCACAAAGCTCAGGATATTGCATCCAAAAGGGGGAAGCTTTTGACCGAGGACTTTCTGTTCTTAATTAGAAAG : GACTTGCCGAAACTTAACCAGTGTACAGAACTGTTGTCCATGAATGAGGAGCTGAAACAAGCTCGGAAGGCTTTCGAGGTCGATAAAGAGAAATTGGCTTCACATCAGTGAAGGGGAAGTGTGATCTCAGTTCAGAATGACAAATTGAGTGGCACCGTAGGACCAGTATACAGTTTACCTCCTCTGGAGTAAATAGCCTGCTTGTTCTCATTTTTCGCTAGCACAATCGATGTCTGAGTCACCTTGTAGCTGCGTTTAGTCTTGCACAATAGATCCTCGATGCTGAAATCAGTTTCTTAAGTGTTCTATTGGTGCATTGAACGCCACCTGTGTGTAGTTTGACAGTTCTAAAGATGGTGGTGTCAGGTATTTATAATTTCATCAATCTACTTGTTTGTAGATCTGCACAAACTGATGGAATGAGTTGTAAGTTAACTCTGAGTAGTCATCTAATTAGATTGATTTTGATCTGTTTGCTATGCAAAAGATGGAAGATCTTGA</gDNA_template>
            <first_frame> N  N  F  G  I  S  I  *  N  S  V  Y  N  C  A  L  V  I  S  S  G  I  N  T  F  A   : G  *  E  V  D  V  K  I  N  *  K  *  T  T  L  L  Q  G  H  P  Q  K  L  E  *  E  H  H  N  L  Q  K  V  H  L  R  G  N  V  A  C  F  R  K  I  :  C  N  T  *  C  M  V  L  E  M  I  A  I :   H  F  Q  K  L  C  H  L  L  K  T  S  W  W  M  M  S  L  I  * :   L  S  L  Q  K  K  I  Q  W  R  K  Y  *  L  *  *  Q  T  F  V  K  R  W  R  R  *  K  T  K  Y  K  Y  *  *  K  H  L  K  T  S  S  M  T  E  L  E  G  D  V  G  K  H  L  K  T  H  N  K  T  I  Y  T  A  A  G  S  T  S  T  G  S  T  Y  A  G  G  T  S  T  K  K  E   : G  A  Q  S  S  G  Y  C  I  Q  K  G  E  A  F  D  R  G  L  S  V  L  N  *  K   : G  L  A  E  T  *  P  V  Y  R  T  V  V  H  E  *  G  A  E  T  S  S  E  G  F  R  G  R  *  R  E  I  G  F  T  S  V  K  G  K  C  D  L  S  S  E  *  Q  I  E  W  H  R  R  T  S  I  Q  F  T  S  S  G  V  N  S  L  L  V  L  I  F  R  *  H  N  R  C  L  S  H  L  V  A  A  F  S  L  A  Q  *  I  L  D  A  E  I  S  F  L  S  V  L  L  V  H  *  T  P  P  V  C  S  L  T  V  L  K  M  V  V  S  G  I  Y  N  F  I  N  L  L  V  C  R  S  A  Q  T  D  G  M  S  C  K  L  T  L  S  S  H  L  I  R  L  I  L  I  C  L  L  C  K  R  W  K  I  L  </first_frame>
            <second_frame>  I  I  L  E  F  Q  F  E  I  L  F  T  I  V  L  S  S  S  P  V  E  S  T  L  L  Q  :  V  E  R  W  T  L  K  *  I  E  N  E  Q  L  F  C  R  A  I  L  K  S  *  S  R  S  I  T  T  F  R  K  F  T  *  E  E  T  W  H  V  S  E  R  F :   A  T  H  D  V  W  F  W  R  *  *  Q   : S  T  S  R  N  C  V  T  C  *  R  H  R  G  G  *  C  H  *  Y   : D  Y  L  S  R  R  R  Y  N  G  E  N  T  S  Y  D  D  K  P  L  S  K  G  G  E  D  R  K  R  S  T  S  I  N  R  N  I  *  K  P  A  A  *  R  S  *  K  V  T  L  G  N  T  *  K  P  I  T  K  Q  Y  I  Q  L  Q  E  A  H  L  Q  E  A  H  M  Q  E  E  H  L  Q  K  K  K  :  V  H  K  A  Q  D  I  A  S  K  R  G  K  L  L  T  E  D  F  L  F  L  I  R  K  :  D  L  P  K  L  N  Q  C  T  E  L  L  S  M  N  E  E  L  K  Q  A  R  K  A  F  E  V  D  K  E  K  L  A  S  H  Q  *  R  G  S  V  I  S  V  Q  N  D  K  L  S  G  T  V  G  P  V  Y  S  L  P  P  L  E  *  I  A  C  L  F  S  F  F  A  S  T  I  D  V  *  V  T  L  *  L  R  L  V  L  H  N  R  S  S  M  L  K  S  V  S  *  V  F  Y  W  C  I  E  R  H  L  C  V  V  *  Q  F  *  R  W  W  C  Q  V  F  I  I  S  S  I  Y  L  F  V  D  L  H  K  L  M  E  *  V  V  S  *  L  *  V  V  I  *  L  D  *  F  *  S  V  C  Y  A  K  D  G  R  S  * </second_frame>
            <third_frame>   *  F  W  N  F  N  L  K  F  C  L  Q  L  C  S  R  H  L  Q  W  N  Q  H  F  C  R :   L  R  G  G  R  *  N  K  L  K  M  N  N  S  S  A  G  P  S  S  K  A  R  V  G  A  S  Q  P  S  E  S  S  L  K  R  K  R  G  M  F  Q  K  D   : L  Q  H  M  M  Y  G  F  G  D  D  S  N  :  P  L  P  E  T  V  S  L  V  E  D  I  V  V  D  D  V  T  D  M  :  T  I  S  P  E  E  D  T  M  E  K  I  L  A  M  M  T  N  L  C  Q  K  V  E  K  I  E  N  E  V  Q  V  L  I  E  T  F  K  N  Q  Q  H  D  G  A  R  R  *  R  W  E  T  P  K  N  P  *  Q  N  N  I  Y  S  C  R  K  H  I  Y  R  K  H  I  C  R  R  N  I  Y  K  K  R  R :   C  T  K  L  R  I  L  H  P  K  G  G  S  F  *  P  R  T  F  C  S  *  L  E  R :   T  C  R  N  L  T  S  V  Q  N  C  C  P  *  M  R  S  *  N  K  L  G  R  L  S  R  S  I  K  R  N  W  L  H  I  S  E  G  E  V  *  S  Q  F  R  M  T  N  *  V  A  P  *  D  Q  Y  T  V  Y  L  L  W  S  K  *  P  A  C  S  H  F  S  L  A  Q  S  M  S  E  S  P  C  S  C  V  *  S  C  T  I  D  P  R  C  *  N  Q  F  L  K  C  S  I  G  A  L  N  A  T  C  V  *  F  D  S  S  K  D  G  G  V  R  Y  L  *  F  H  Q  S  T  C  L  *  I  C  T  N  *  W  N  E  L  *  V  N  S  E  *  S  S  N  *  I  D  F  D  L  F  A  M  Q  K  M  E  D  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89685" stop="89799"/>
                    <exon start="89888" stop="89925"/>
                    <exon start="90714" stop="90773"/>
                    <exon start="96927" stop="97070"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>354</number_coding_nucleotides>
                  <number_encoded_amino_acids>118</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKLKMNNSSAGPSSKARVGASQPSESSLKRKRGMFQKDLQHMMYGFGDDSNPLPETVSLVEDIVVDDVTDMTISPEEDTMEKILAMMTNLCQKVEKIENEVQVLIETFKNQQHDGARR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97088" stop="97174"/>
                    <exon start="98496" stop="98570"/>
                    <exon start="99413" stop="99523"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KPITKQYIQLQEAHLQEAHMQEEHLQKKKVHKAQDIASKRGKLLTEDFLFLIRKDLPKLNQCTELLSMNEELKQARKAFEVDKEKLASHQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="97117" e_stop="98397"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="97117" e_stop="98397" e_length="1281"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97117" stop="98397"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572408" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAGGAAGCACATCTACAGGAAGCACATATGCAGGAGGAACATCTACAAAAAAAGAAGGTAAGATGAAATATACAAACACAAATGAACAAACTATTCTCTAAACCATACTCTCCACAAAATACCCAAAAAGATATGTTCGTACCCCACAAATAAATACTTACAAAGCCAGTCTAGATTCACAAAAACAAACATATAATCACATTAACAGAATGTATATAGAAAATATATACAAGATACAAACTTTTCTAAACCTAAACCCTAGAGCAAAAGATACCAAAAATCCAAACGAAAATTTTATATCACCCAATACCTACAAGGATACAACAAACTAATAGCACAACCAGGAACAAATCCAAATCTAGTAGCAACTTGCTACAATTACGGGCTAATAAGCACAGTATATACTATAACTGGAGACGAAGTAGCTAAAATACCTGAGCTACATGAGGCATTTCTGCAATATAAAAGAATAACTAAAGGAACTTTATTTTATATAAAGTTCTACTCAGCAACAGCAGAAATACTATATGAAGAAATTAAACCTACAATACAAGTTATTAAGATAGATTTAACTAGAGATATGATAATACTAGAAAAAATAGATATACAAGAAGAGATACAGAAGGTGGATATCCCAGATTTTTATGCAAACAAAAGAACTATTGGGATAGCTACCATATTAAATGAGTTATCAAACACTACCTAAATGAAAATGCAATTTGGAGTTATTACAACAGAGATCAAACAATGATATACTCCAATTGTAGAGATATAAGAGCAGCAGATATGGAAGAAGTACGACAATGGATATTAAGTCTGCTGAAGCCAGAACAAACACCTACAACAAGAGCTATCAGGAAAAAATTCATTTCTCCAAACTTGATGACCAGATACTGCAAACTAATTGGACAAAAGTATTCAGATCATCTATGTACAAAATGCGACGGAGAAGATAACTATATTCCTGAAGTCCAGCTAGAATGAAGACATATGTAAAGTATGAATAGTAGTGTCTGTAAAGTATGAATAGTAGTGTCGGCCATATTTAAAAAAGCAAAGGCCAGTATATAAAGAAGTAAAGTTGTAAATAGTATGTCGGCCATATAAAAAATAAAGGCCAATTATGTGTGAAAGTATTTTGTTTTCTTGTGTCGGCCGAATATAAATAGGCCAGGTGTAAAGTGTTGTATGTAAAGGAGTGTCGGCCATTTGGCCAAAGTGTTGAGTTTTCTTGTATAAATAGAGGGCTTTCCCTCATAATAAAATCATCCCTTTCCTCT</gDNA_template>
            <first_frame> A  G  S  T  S  T  G  S  T  Y  A  G  G  T  S  T  K  K  E  G  K  M  K  Y  T  N  T  N  E  Q  T  I  L  *  T  I  L  S  T  K  Y  P  K  R  Y  V  R  T  P  Q  I  N  T  Y  K  A  S  L  D  S  Q  K  Q  T  Y  N  H  I  N  R  M  Y  I  E  N  I  Y  K  I  Q  T  F  L  N  L  N  P  R  A  K  D  T  K  N  P  N  E  N  F  I  S  P  N  T  Y  K  D  T  T  N  *  *  H  N  Q  E  Q  I  Q  I  *  *  Q  L  A  T  I  T  G  *  *  A  Q  Y  I  L  *  L  E  T  K  *  L  K  Y  L  S  Y  M  R  H  F  C  N  I  K  E  *  L  K  E  L  Y  F  I  *  S  S  T  Q  Q  Q  Q  K  Y  Y  M  K  K  L  N  L  Q  Y  K  L  L  R  *  I  *  L  E  I  *  *  Y  *  K  K  *  I  Y  K  K  R  Y  R  R  W  I  S  Q  I  F  M  Q  T  K  E  L  L  G  *  L  P  Y  *  M  S  Y  Q  T  L  P  K  *  K  C  N  L  E  L  L  Q  Q  R  S  N  N  D  I  L  Q  L  *  R  Y  K  S  S  R  Y  G  R  S  T  T  M  D  I  K  S  A  E  A  R  T  N  T  Y  N  K  S  Y  Q  E  K  I  H  F  S  K  L  D  D  Q  I  L  Q  T  N  W  T  K  V  F  R  S  S  M  Y  K  M  R  R  R  R  *  L  Y  S  *  S  P  A  R  M  K  T  Y  V  K  Y  E  *  *  C  L  *  S  M  N  S  S  V  G  H  I  *  K  S  K  G  Q  Y  I  K  K  *  S  C  K  *  Y  V  G  H  I  K  N  K  G  Q  L  C  V  K  V  F  C  F  L  V  S  A  E  Y  K  *  A  R  C  K  V  L  Y  V  K  E  C  R  P  F  G  Q  S  V  E  F  S  C  I  N  R  G  L  S  L  I  I  K  S  S  L  S  S </first_frame>
            <second_frame>  Q  E  A  H  L  Q  E  A  H  M  Q  E  E  H  L  Q  K  K  K  V  R  *  N  I  Q  T  Q  M  N  K  L  F  S  K  P  Y  S  P  Q  N  T  Q  K  D  M  F  V  P  H  K  *  I  L  T  K  P  V  *  I  H  K  N  K  H  I  I  T  L  T  E  C  I  *  K  I  Y  T  R  Y  K  L  F  *  T  *  T  L  E  Q  K  I  P  K  I  Q  T  K  I  L  Y  H  P  I  P  T  R  I  Q  Q  T  N  S  T  T  R  N  K  S  K  S  S  S  N  L  L  Q  L  R  A  N  K  H  S  I  Y  Y  N  W  R  R  S  S  *  N  T  *  A  T  *  G  I  S  A  I  *  K  N  N  *  R  N  F  I  L  Y  K  V  L  L  S  N  S  R  N  T  I  *  R  N  *  T  Y  N  T  S  Y  *  D  R  F  N  *  R  Y  D  N  T  R  K  N  R  Y  T  R  R  D  T  E  G  G  Y  P  R  F  L  C  K  Q  K  N  Y  W  D  S  Y  H  I  K  *  V  I  K  H  Y  L  N  E  N  A  I  W  S  Y  Y  N  R  D  Q  T  M  I  Y  S  N  C  R  D  I  R  A  A  D  M  E  E  V  R  Q  W  I  L  S  L  L  K  P  E  Q  T  P  T  T  R  A  I  R  K  K  F  I  S  P  N  L  M  T  R  Y  C  K  L  I  G  Q  K  Y  S  D  H  L  C  T  K  C  D  G  E  D  N  Y  I  P  E  V  Q  L  E  *  R  H  M  *  S  M  N  S  S  V  C  K  V  *  I  V  V  S  A  I  F  K  K  A  K  A  S  I  *  R  S  K  V  V  N  S  M  S  A  I  *  K  I  K  A  N  Y  V  *  K  Y  F  V  F  L  C  R  P  N  I  N  R  P  G  V  K  C  C  M  *  R  S  V  G  H  L  A  K  V  L  S  F  L  V  *  I  E  G  F  P  S  *  *  N  H  P  F  P   </second_frame>
            <third_frame>   R  K  H  I  Y  R  K  H  I  C  R  R  N  I  Y  K  K  R  R  *  D  E  I  Y  K  H  K  *  T  N  Y  S  L  N  H  T  L  H  K  I  P  K  K  I  C  S  Y  P  T  N  K  Y  L  Q  S  Q  S  R  F  T  K  T  N  I  *  S  H  *  Q  N  V  Y  R  K  Y  I  Q  D  T  N  F  S  K  P  K  P  *  S  K  R  Y  Q  K  S  K  R  K  F  Y  I  T  Q  Y  L  Q  G  Y  N  K  L  I  A  Q  P  G  T  N  P  N  L  V  A  T  C  Y  N  Y  G  L  I  S  T  V  Y  T  I  T  G  D  E  V  A  K  I  P  E  L  H  E  A  F  L  Q  Y  K  R  I  T  K  G  T  L  F  Y  I  K  F  Y  S  A  T  A  E  I  L  Y  E  E  I  K  P  T  I  Q  V  I  K  I  D  L  T  R  D  M  I  I  L  E  K  I  D  I  Q  E  E  I  Q  K  V  D  I  P  D  F  Y  A  N  K  R  T  I  G  I  A  T  I  L  N  E  L  S  N  T  T  *  M  K  M  Q  F  G  V  I  T  T  E  I  K  Q  *  Y  T  P  I  V  E  I  *  E  Q  Q  I  W  K  K  Y  D  N  G  Y  *  V  C  *  S  Q  N  K  H  L  Q  Q  E  L  S  G  K  N  S  F  L  Q  T  *  *  P  D  T  A  N  *  L  D  K  S  I  Q  I  I  Y  V  Q  N  A  T  E  K  I  T  I  F  L  K  S  S  *  N  E  D  I  C  K  V  *  I  V  V  S  V  K  Y  E  *  *  C  R  P  Y  L  K  K  Q  R  P  V  Y  K  E  V  K  L  *  I  V  C  R  P  Y  K  K  *  R  P  I  M  C  E  S  I  L  F  S  C  V  G  R  I  *  I  G  Q  V  *  S  V  V  C  K  G  V  S  A  I  W  P  K  C  *  V  F  L  Y  K  *  R  A  F  P  H  N  K  I  I  P  F  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97380" stop="97823"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>441</number_coding_nucleotides>
                  <number_encoded_amino_acids>147</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKRYQKSKRKFYITQYLQGYNKLIAQPGTNPNLVATCYNYGLISTVYTITGDEVAKIPELHEAFLQYKRITKGTLFYIKFYSATAEILYEEIKPTIQVIKIDLTRDMIILEKIDIQEEIQKVDIPDFYANKRTIGIATILNELSNTT*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97805" stop="98101"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>294</number_coding_nucleotides>
                  <number_encoded_amino_acids>98</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VIKHYLNENAIWSYYNRDQTMIYSNCRDIRAADMEEVRQWILSLLKPEQTPTTRAIRKKFISPNLMTRYCKLIGQKYSDHLCTKCDGEDNYIPEVQLE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="104875" PGL_stop="105213"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="104875" e_stop="105213"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="104875" e_stop="105213" e_length="339"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104875" stop="105213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U601436" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCTTCAAAATAAATAGAAAATTTTCATTGTGCAATATTAGAAGTAATAAGACATGGAGATATCATTGCAAAATTAAGGAGTGCAATGAAGTCCTCAGTCCTCACTCTTATAAATTGCATACTGATTAACCGGTTTCCTGAGCTCGATGAGGCGAAACTAAACTACCAAAACTAGTGTCACCAACATCCAGACACGGTAAAGATTGTCACAGATTTCTGATACGGTAAAGATTTTACAAATCCAAGGGAAATGCCAAAGCCATGAAGCAAGCAGTAACCTGATGTCAACTAACTAGCCCAGAAGTTTCATATAAACAATGCATCTACATGATGGATTCC</gDNA_template>
            <first_frame> T  F  K  I  N  R  K  F  S  L  C  N  I  R  S  N  K  T  W  R  Y  H  C  K  I  K  E  C  N  E  V  L  S  P  H  S  Y  K  L  H  T  D  *  P  V  S  *  A  R  *  G  E  T  K  L  P  K  L  V  S  P  T  S  R  H  G  K  D  C  H  R  F  L  I  R  *  R  F  Y  K  S  K  G  N  A  K  A  M  K  Q  A  V  T  *  C  Q  L  T  S  P  E  V  S  Y  K  Q  C  I  Y  M  M  D  S </first_frame>
            <second_frame>  P  S  K  *  I  E  N  F  H  C  A  I  L  E  V  I  R  H  G  D  I  I  A  K  L  R  S  A  M  K  S  S  V  L  T  L  I  N  C  I  L  I  N  R  F  P  E  L  D  E  A  K  L  N  Y  Q  N  *  C  H  Q  H  P  D  T  V  K  I  V  T  D  F  *  Y  G  K  D  F  T  N  P  R  E  M  P  K  P  *  S  K  Q  *  P  D  V  N  *  L  A  Q  K  F  H  I  N  N  A  S  T  *  W  I   </second_frame>
            <third_frame>   L  Q  N  K  *  K  I  F  I  V  Q  Y  *  K  *  *  D  M  E  I  S  L  Q  N  *  G  V  Q  *  S  P  Q  S  S  L  L  *  I  A  Y  *  L  T  G  F  L  S  S  M  R  R  N  *  T  T  K  T  S  V  T  N  I  Q  T  R  *  R  L  S  Q  I  S  D  T  V  K  I  L  Q  I  Q  G  K  C  Q  S  H  E  A  S  S  N  L  M  S  T  N  *  P  R  S  F  I  *  T  M  H  L  H  D  G  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0005F12.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="106766" PGL_stop="105618"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="106766" e_stop="105618"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="106766" e_stop="105618" e_length="1149"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106766" stop="105618"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568402" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTCGGTGGACATTTTGGGGGATACTGACAAAACTATTCACCAATCAGAAATGGATATGGGTCGCAAACAAGAAGGCACAAAGAATGAGGAGGAAAGGCCCCCAAGTGAAAAGCAACCAATGTCGCATTTAGTACAGATGAAACCTATAGTACCTCAAGCCTCATCACATGCTGCAACAGTTTCTTCCGGTCAGTTCTTTTCACAGAGCATAACAGACTTTTAGTTCATCTCATCCAATTTAGTCAGTTTATTTAGGAGATGCTTTGAACAAAATACATTATGTAATTAAGTTATGATGCAGAACTGGGTCAGATGGTATGTGGTGGTTGCCAACAGTTACTTTCTTATTCACAAGGGGCTAAATTGGTGAAGTGTTCATGCTGCCAGACCGTCAATCTTGTGCTAGAAGGTTTCTGCTTCCTCTTTTATACTAAAATGGATTCTTACACTCCTTGTCATTTTCCCCTTGTCACAAAATCAGATATATTCTAGTGATGATATTTCAATTTATCATTGGTAGGTTGGTAGGTTGCCCCCATATATAAGTTTTGTTGAATCTTGACACGTGCCAAAATTGCTGAAAAGATAACGTATAAAATAACTTCTAATTGACAGTATGAACAGTTAGTTTTCTCCATGCTTTTTATTCAGGGATCCGCTTTTGGTAAATCGGAGCCCTGTTATCAATATGTTTAAGTACGTTAGGAACAACTGATGTAAAATAACCGTGTGGTGCAGCTTCATTCTGATTTTTCCTTCTGATACTGTAAGTTCTGTATCTATTGTGAACTGGCATACCAGACCACTCATACTTGGATAGAGAGGAAATAAATAGGAAACAGACATTTGCTTCACTTTCTTGTTTTCATGGATCTGTACAACTATCCTGGAGAATTTGATGGTTGAAGACCATCGACTCATTTCTATGGGGGGCTCACTCACGTGGTTCTGATTGTTCTCACTGCAGCTCATGAGGTTGGACAAGTTAAGTGTGGGGGTTGTGCAGTGCTGCTCATGTATCCGTATGGGGCGCCATCAGTTAGATGTTCATCTTGTCGTCACATGACAAAAATTTGGGTATGGACTTCATTTCTTCAGAAATACTTGTGCAGTCATGTCAATTAATCATATGACATTTTTTTTTGGG</gDNA_template>
            <first_frame> F  S  V  D  I  L  G  D  T  D  K  T  I  H  Q  S  E  M  D  M  G  R  K  Q  E  G  T  K  N  E  E  E  R  P  P  S  E  K  Q  P  M  S  H  L  V  Q  M  K  P  I  V  P  Q  A  S  S  H  A  A  T  V  S  S  G  Q  F  F  S  Q  S  I  T  D  F  *  F  I  S  S  N  L  V  S  L  F  R  R  C  F  E  Q  N  T  L  C  N  *  V  M  M  Q  N  W  V  R  W  Y  V  V  V  A  N  S  Y  F  L  I  H  K  G  L  N  W  *  S  V  H  A  A  R  P  S  I  L  C  *  K  V  S  A  S  S  F  I  L  K  W  I  L  T  L  L  V  I  F  P  L  S  Q  N  Q  I  Y  S  S  D  D  I  S  I  Y  H  W  *  V  G  R  L  P  P  Y  I  S  F  V  E  S  *  H  V  P  K  L  L  K  R  *  R  I  K  *  L  L  I  D  S  M  N  S  *  F  S  P  C  F  L  F  R  D  P  L  L  V  N  R  S  P  V  I  N  M  F  K  Y  V  R  N  N  *  C  K  I  T  V  W  C  S  F  I  L  I  F  P  S  D  T  V  S  S  V  S  I  V  N  W  H  T  R  P  L  I  L  G  *  R  G  N  K  *  E  T  D  I  C  F  T  F  L  F  S  W  I  C  T  T  I  L  E  N  L  M  V  E  D  H  R  L  I  S  M  G  G  S  L  T  W  F  *  L  F  S  L  Q  L  M  R  L  D  K  L  S  V  G  V  V  Q  C  C  S  C  I  R  M  G  R  H  Q  L  D  V  H  L  V  V  T  *  Q  K  F  G  Y  G  L  H  F  F  R  N  T  C  A  V  M  S  I  N  H  M  T  F  F  F  G </first_frame>
            <second_frame>  F  R  W  T  F  W  G  I  L  T  K  L  F  T  N  Q  K  W  I  W  V  A  N  K  K  A  Q  R  M  R  R  K  G  P  Q  V  K  S  N  Q  C  R  I  *  Y  R  *  N  L  *  Y  L  K  P  H  H  M  L  Q  Q  F  L  P  V  S  S  F  H  R  A  *  Q  T  F  S  S  S  H  P  I  *  S  V  Y  L  G  D  A  L  N  K  I  H  Y  V  I  K  L  *  C  R  T  G  S  D  G  M  W  W  L  P  T  V  T  F  L  F  T  R  G  *  I  G  E  V  F  M  L  P  D  R  Q  S  C  A  R  R  F  L  L  P  L  L  Y  *  N  G  F  L  H  S  L  S  F  S  P  C  H  K  I  R  Y  I  L  V  M  I  F  Q  F  I  I  G  R  L  V  G  C  P  H  I  *  V  L  L  N  L  D  T  C  Q  N  C  *  K  D  N  V  *  N  N  F  *  L  T  V  *  T  V  S  F  L  H  A  F  Y  S  G  I  R  F  W  *  I  G  A  L  L  S  I  C  L  S  T  L  G  T  T  D  V  K  *  P  C  G  A  A  S  F  *  F  F  L  L  I  L  *  V  L  Y  L  L  *  T  G  I  P  D  H  S  Y  L  D  R  E  E  I  N  R  K  Q  T  F  A  S  L  S  C  F  H  G  S  V  Q  L  S  W  R  I  *  W  L  K  T  I  D  S  F  L  W  G  A  H  S  R  G  S  D  C  S  H  C  S  S  *  G  W  T  S  *  V  W  G  L  C  S  A  A  H  V  S  V  W  G  A  I  S  *  M  F  I  L  S  S  H  D  K  N  L  G  M  D  F  I  S  S  E  I  L  V  Q  S  C  Q  L  I  I  *  H  F  F  L   </second_frame>
            <third_frame>   F  G  G  H  F  G  G  Y  *  Q  N  Y  S  P  I  R  N  G  Y  G  S  Q  T  R  R  H  K  E  *  G  G  K  A  P  K  *  K  A  T  N  V  A  F  S  T  D  E  T  Y  S  T  S  S  L  I  T  C  C  N  S  F  F  R  S  V  L  F  T  E  H  N  R  L  L  V  H  L  I  Q  F  S  Q  F  I  *  E  M  L  *  T  K  Y  I  M  *  L  S  Y  D  A  E  L  G  Q  M  V  C  G  G  C  Q  Q  L  L  S  Y  S  Q  G  A  K  L  V  K  C  S  C  C  Q  T  V  N  L  V  L  E  G  F  C  F  L  F  Y  T  K  M  D  S  Y  T  P  C  H  F  P  L  V  T  K  S  D  I  F  *  *  *  Y  F  N  L  S  L  V  G  W  *  V  A  P  I  Y  K  F  C  *  I  L  T  R  A  K  I  A  E  K  I  T  Y  K  I  T  S  N  *  Q  Y  E  Q  L  V  F  S  M  L  F  I  Q  G  S  A  F  G  K  S  E  P  C  Y  Q  Y  V  *  V  R  *  E  Q  L  M  *  N  N  R  V  V  Q  L  H  S  D  F  S  F  *  Y  C  K  F  C  I  Y  C  E  L  A  Y  Q  T  T  H  T  W  I  E  R  K  *  I  G  N  R  H  L  L  H  F  L  V  F  M  D  L  Y  N  Y  P  G  E  F  D  G  *  R  P  S  T  H  F  Y  G  G  L  T  H  V  V  L  I  V  L  T  A  A  H  E  V  G  Q  V  K  C  G  G  C  A  V  L  L  M  Y  P  Y  G  A  P  S  V  R  C  S  S  C  R  H  M  T  K  I  W  V  W  T  S  F  L  Q  K  Y  L  C  S  H  V  N  *  S  Y  D  I  F  F  W  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106766" stop="106542"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSVDILGDTDKTIHQSEMDMGRKQEGTKNEEERPPSEKQPMSHLVQMKPIVPQASSHAATVSSGQFFSQSITDF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105858" stop="105640"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RPSTHFYGGLTHVVLIVLTAAHEVGQVKCGGCAVLLMYPYGAPSVRCSSCRHMTKIWVWTSFLQKYLCSHVN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="106479" stop="106273"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSYDAELGQMVCGGCQQLLSYSQGAKLVKCSCCQTVNLVLEGFCFLFYTKMDSYTPCHFPLVTKSDIF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="110739" PGL_stop="106928"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="110739" e_stop="110530"/>
            <exon e_start="109997" e_stop="109862"/>
            <exon e_start="108841" e_stop="108704"/>
            <exon e_start="108108" e_stop="107971"/>
            <exon e_start="107032" e_stop="106928"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.976" e_score="0.929"/>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="0.941"/>
          <exon-intron don_prob="0.995" acc_prob="0.539" e_score="0.942"/>
          <exon-intron don_prob="0.994" acc_prob="0.911" e_score="0.949"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.929">
            <gDNA_exon_boundary e_start="110739" e_stop="110530" e_length="210"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.976">
            <gDNA_intron_boundary i_start="110529" i_stop="109998" i_length="532"/>
          </intron>
          <exon e_serial="2" e_score="0.941">
            <gDNA_exon_boundary e_start="109997" e_stop="109862" e_length="136"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="109861" i_stop="108842" i_length="1020"/>
          </intron>
          <exon e_serial="3" e_score="0.942">
            <gDNA_exon_boundary e_start="108841" e_stop="108704" e_length="138"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.539">
            <gDNA_intron_boundary i_start="108703" i_stop="108109" i_length="595"/>
          </intron>
          <exon e_serial="4" e_score="0.949">
            <gDNA_exon_boundary e_start="108108" e_stop="107971" e_length="138"/>
          </exon>
          <intron i_serial="4" don_prob="0.994" acc_prob="0.911">
            <gDNA_intron_boundary i_start="107970" i_stop="107033" i_length="938"/>
          </intron>
          <exon e_serial="5" e_score="0.990">
            <gDNA_exon_boundary e_start="107032" e_stop="106928" e_length="105"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110739" stop="110530"/>
              <exon start="109997" stop="109862"/>
              <exon start="108841" stop="108704"/>
              <exon start="108108" stop="107971"/>
              <exon start="107032" stop="106928"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604426" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTGTAAGAGCAAAAAAAAAAAATGGAAGAAAAGTTGAGCCACATCGAAAATCAGCAATTAGATGATGATGAAGAAGAAGATGAGGGTCCACCGCCTGGTTTCGACTCTTTAGCTGTACCATCGCAAAACACCAATGTCGTCATAGATGAAGATGATGATGAAGGACCACCTCCAGGTTGGCCATCAATTCCTCAGCAACACAACCTCCAG : ACTACTGATGTAGAGATGGGGAGCAAAGAACACAAATCGGAAGATGATGAAGATGGTCCGCCACCTGGGTGGAACACTGTAATCTCACAGAAAAAATCGCCATCTTCACCGCCAACCCTAGAAGCAGTTATTTGTG : ATATAGAAATGGAGAAGAAAGAAGAAATCATTAAAAATGAAGATAATGGTCCACCGCCGATATGGCAGTTGACCCCTAAACTGCCAGCGCTACAAACATCTACACCACCATCATGGACACAAGGAGCTTCTCTTGAAG : ATATAGAAATGGAGAAGAAAGAGGAAGCCGTTGAAGATGAAGATAATGGTCCACCGCCAGGATGGCAATTGACCCCTCAACTACTGCCTCTACAGACATCTACACCACCATCAGGGATACAAGGAGCGCCTCTTGCTG : ACGTTGAAATGGCGAGCAACCAGGACTGTGATGTTGAAAAGGAAGGACATCCACTGGGATCGCCTACACCACCACTGCAGTCGTCATCACCGGTTGCTTCTTCTG</gDNA_template>
            <first_frame> L  *  E  Q  K  K  K  M  E  E  K  L  S  H  I  E  N  Q  Q  L  D  D  D  E  E  E  D  E  G  P  P  P  G  F  D  S  L  A  V  P  S  Q  N  T  N  V  V  I  D  E  D  D  D  E  G  P  P  P  G  W  P  S  I  P  Q  Q  H  N  L  Q  :  T  T  D  V  E  M  G  S  K  E  H  K  S  E  D  D  E  D  G  P  P  P  G  W  N  T  V  I  S  Q  K  K  S  P  S  S  P  P  T  L  E  A  V  I  C   : D  I  E  M  E  K  K  E  E  I  I  K  N  E  D  N  G  P  P  P  I  W  Q  L  T  P  K  L  P  A  L  Q  T  S  T  P  P  S  W  T  Q  G  A  S  L  E   : D  I  E  M  E  K  K  E  E  A  V  E  D  E  D  N  G  P  P  P  G  W  Q  L  T  P  Q  L  L  P  L  Q  T  S  T  P  P  S  G  I  Q  G  A  P  L  A   : D  V  E  M  A  S  N  Q  D  C  D  V  E  K  E  G  H  P  L  G  S  P  T  P  P  L  Q  S  S  S  P  V  A  S  S  </first_frame>
            <second_frame>  C  K  S  K  K  K  K  W  K  K  S  *  A  T  S  K  I  S  N  *  M  M  M  K  K  K  M  R  V  H  R  L  V  S  T  L  *  L  Y  H  R  K  T  P  M  S  S  *  M  K  M  M  M  K  D  H  L  Q  V  G  H  Q  F  L  S  N  T  T  S  R :   L  L  M  *  R  W  G  A  K  N  T  N  R  K  M  M  K  M  V  R  H  L  G  G  T  L  *  S  H  R  K  N  R  H  L  H  R  Q  P  *  K  Q  L  F  V  :  I  *  K  W  R  R  K  K  K  S  L  K  M  K  I  M  V  H  R  R  Y  G  S  *  P  L  N  C  Q  R  Y  K  H  L  H  H  H  H  G  H  K  E  L  L  L  K  :  I  *  K  W  R  R  K  R  K  P  L  K  M  K  I  M  V  H  R  Q  D  G  N  *  P  L  N  Y  C  L  Y  R  H  L  H  H  H  Q  G  Y  K  E  R  L  L  L  :  T  L  K  W  R  A  T  R  T  V  M  L  K  R  K  D  I  H  W  D  R  L  H  H  H  C  S  R  H  H  R  L  L  L  L </second_frame>
            <third_frame>   V  R  A  K  K  K  N  G  R  K  V  E  P  H  R  K  S  A  I  R  *  *  *  R  R  R  *  G  S  T  A  W  F  R  L  F  S  C  T  I  A  K  H  Q  C  R  H  R  *  R  *  *  *  R  T  T  S  R  L  A  I  N  S  S  A  T  Q  P  P   : D  Y  *  C  R  D  G  E  Q  R  T  Q  I  G  R  *  *  R  W  S  A  T  W  V  E  H  C  N  L  T  E  K  I  A  I  F  T  A  N  P  R  S  S  Y  L  * :   Y  R  N  G  E  E  R  R  N  H  *  K  *  R  *  W  S  T  A  D  M  A  V  D  P  *  T  A  S  A  T  N  I  Y  T  T  I  M  D  T  R  S  F  S  *  R :   Y  R  N  G  E  E  R  G  S  R  *  R  *  R  *  W  S  T  A  R  M  A  I  D  P  S  T  T  A  S  T  D  I  Y  T  T  I  R  D  T  R  S  A  S  C  * :   R  *  N  G  E  Q  P  G  L  *  C  *  K  G  R  T  S  T  G  I  A  Y  T  T  T  A  V  V  I  T  G  C  F  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0005F12.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="110733" stop="110530"/>
                    <exon start="109997" stop="109862"/>
                    <exon start="108841" stop="108704"/>
                    <exon start="108108" stop="107971"/>
                    <exon start="107032" stop="106929"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>720</number_coding_nucleotides>
                  <number_encoded_amino_acids>240</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EQKKKMEEKLSHIENQQLDDDEEEDEGPPPGFDSLAVPSQNTNVVIDEDDDEGPPPGWPSIPQQHNLQTTDVEMGSKEHKSEDDEDGPPPGWNTVISQKKSPSSPPTLEAVICDIEMEKKEEIIKNEDNGPPPIWQLTPKLPALQTSTPPSWTQGASLEDIEMEKKEEAVEDEDNGPPPGWQLTPQLLPLQTSTPPSGIQGAPLADVEMASNQDCDVEKEGHPLGSPTPPLQSSSPVASS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 38 chains have been computed
$ 
$ memory statistics:
$ 46232 bytes spliced alignments in total
$ 21 spliced alignments have been stored
$ 2201 bytes was the average size of a spliced alignment
$ 27488 bytes predicted gene locations in total
$ 18 predicted gene locations have been stored
$ 1527 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 39 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:36:14
-->
