<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:37:43"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575044" ref_strand="+" ref_description="SGN-U575044 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157354701|emb|CAO48019.1| (e_value=6e-47) unnamed; (*ATH) AT1G06410.1 (e_value=2e-39) | Symbol: None | glycosyl transferase family 20 protein / trehalose-phosphatase family protein, contains Pfam profile: PF02358 trehalose-phosphatase | chr1:1955412-1958755 FORWARD | Aliases: T2D23.11, T2D23_11; (*SWP) sp|Q9LMI0|TPS7_ARATH (e_value=1e-38) Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7; ">
      <seq>aaaagttaatgaacattgatagaaagagtatgaataagatatatatacatataacatatatagagagagaaacaaagagtaagagagactaaaccctagatttcattctgactgaaagcagagtattttgtattttgaccaacaaagagctgtgtttacatctaattttttttccgtcattattcataaagtttgataaacaagaagaggctattgggttttggttggtgggtgtgattcagtctgaggaagttgttttgtgatgtatgtggattgagttttttgaagagaaaaaaagtttctgtttggtctgttttctaatttgaggatctgctgaaggagtttttgcaaataaagggcttgtaaagatgatgtccaaatcttataccaacttgctagatctagcatctgggaatttcccggtgatggggcgggaaaagaagcggctgccacgggtaatgacagttgctggagttatttctgagcttgatgatgatcaagctaatagtgttacatcagatgttccatcatcaattattgtagatcgaataattatagtggctaatcagctccctgtaaaagctaagcgtaggtcggataataaaggatggaattttagttgggatgaggattcgttgttgttgcacataaaagatgggttgccanangatatggnanttctctatgttggttctttaaaggttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="+" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="4843" stop="6460"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5143" g_stop="5333" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="191" r_length="191" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5334" i_stop="5646" i_length="313">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5647" g_stop="6160" g_length="514"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="705" r_length="514" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="+" ref_id="SGN-U575044" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U575044" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5143" e_stop="5333"/>
          <exon e_start="5647" e_stop="6160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGTTAATGAACATTGATAGAAAGAGTATGAATAAGATATATATACATATAACATATATAGAGAGAGAAACAAAGAGTAAGAGAGACTAAACCCTAGATTTCATTCTGACTGAAAGCAGAGTATTTTGTATTTTGACCAACAAAGAGCTGTGTTTACATCTAATTTTTTTTCCGTCATTATTCATAAAGGTAAGTGATTAAAGTTTTTATTTTTTGAACACTTTATTAGTGTTAATGTTGTTTTATGTAATAAATGTTATGTGAAAAGAATAAAAAAATTGCTAATGGAGTTGTTTATATGTATGGTGATTATTAGGTGTAGGTTGGATTTGATCTTGTTTTTTTTTTTTAAAGATTGAAGTTTTTAACTATATTTTGTGAATGGGTTTCTGTTTTATTGATTGGATCATGTTTTTTGTTACTCTTTTGCTTGAAGTTTAATGAGTTAATTTTGATTCTTGGATTATACTCATTTTTTCAGATCTTTTTGAAATGTACTCAGTTTGATAAACAAGAAGAGGCTATTGGGTTTTGGTTGGTGGGTGTGATTCAGTCTGAGGAAGTTGTTTTGTGATGTATGTGGATTGAGTTTTTTGAAGAGAAAAAAAGTTTCTGTTTGGTCTGTTTTCTAATTTGAGGATCTGCTGAAGGAGTTTTTGCAAATAAAGGGCTTGTAAAGATGATGTCCAAATCTTATACCAACTTGCTAGATCTAGCATCTGGGAATTTCCCGGTGATGGGGCGGGAAAAGAAGCGGCTGCCACGGGTAATGACAGTTGCTGGAGTTATTTCTGAGCTTGATGATGATCAAGCTAATAGTGTTACATCAGATGTTCCATCATCAATTATTGTAGATCGAATAATTATAGTGGCTAATCAGCTCCCTGTAAAAGCTAAGCGTAGGTCGGATAATAAAGGATGGAATTTTAGTTGGGATGAGGATTCGTTGTTGTTGCACATAAAAGATGGGTTGCCAGATGATATGGAAGTTCTCTATGTTGGTTCTTTAAAGGTTG</genome_strand>
        <mrna_strand>AAAAGTTAATGAACATTGATAGAAAGAGTATGAATAAGATATATATACATATAACATATATAGAGAGAGAAACAAAGAGTAAGAGAGACTAAACCCTAGATTTCATTCTGACTGAAAGCAGAGTATTTTGTATTTTGACCAACAAAGAGCTGTGTTTACATCTAATTTTTTTTCCGTCATTATTCATAAAG.........................................................................................................................................................................................................................................................................................................................TTTGATAAACAAGAAGAGGCTATTGGGTTTTGGTTGGTGGGTGTGATTCAGTCTGAGGAAGTTGTTTTGTGATGTATGTGGATTGAGTTTTTTGAAGAGAAAAAAAGTTTCTGTTTGGTCTGTTTTCTAATTTGAGGATCTGCTGAAGGAGTTTTTGCAAATAAAGGGCTTGTAAAGATGATGTCCAAATCTTATACCAACTTGCTAGATCTAGCATCTGGGAATTTCCCGGTGATGGGGCGGGAAAAGAAGCGGCTGCCACGGGTAATGACAGTTGCTGGAGTTATTTCTGAGCTTGATGATGATCAAGCTAATAGTGTTACATCAGATGTTCCATCATCAATTATTGTAGATCGAATAATTATAGTGGCTAATCAGCTCCCTGTAAAAGCTAAGCGTAGGTCGGATAATAAAGGATGGAATTTTAGTTGGGATGAGGATTCGTTGTTGTTGCACATAAAAGATGGGTTGCCANANGATATGGNANTTCTCTATGTTGGTTCTTTAAAGGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575051" ref_strand="+" ref_description="SGN-U575051 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157354701|emb|CAO48019.1| (e_value=6e-49) unnamed; (*ATH) AT1G06410.1 (e_value=9e-42) | Symbol: None | glycosyl transferase family 20 protein / trehalose-phosphatase family protein, contains Pfam profile: PF02358 trehalose-phosphatase | chr1:1955412-1958755 FORWARD | Aliases: T2D23.11, T2D23_11; (*SWP) sp|Q9LMI0|TPS7_ARATH (e_value=8e-41) Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7; ">
      <seq>attgatagaaagagtatgaataagatatatatacatataacatatatagagagagaaacaaagagtaagagagactaaaccctagatttcattctgactgaaagcagagtattttgtattttgaccaacaaagagctgtgtttacatctaattttttttccgtcattattcataaagatctttttgaaatgtactcagtttgataaacaagaagaggctattgggttttggttggtgggtgtgattcagtctgaggaagttgttttgtgatgtatgtggattgagttttttgaagagaaaaaaagtttctgtttggtctgttttctaatttgaggatctgctgaaggagtttttgcaaataaagggcttgtaaagatgatgtccaaatcttataccaacttgctagatctagcatctgggaatttcccggtgatggggcgggaaaagaagcggctgccacgggtaatgacagttgctggagttatttctgagcttgatgatgatcaagctaatagtgttacatcagatgttccatcatcaattattgtagatcgaataattatagtggctaatcagctccctgtaaaagctaagcgtaggtcgnataataaaggatggaattttanttgggatgaggantcgttgttgttgcacataaaagatgggttgccagangatatggaagttctctatgttggttctttaaaggntgaggtcgattcaagtgaacagnatgangtttcacagttgctgctggnnagatttaaatgngtncctgcttttctacctccanacntttna</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="+" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="4857" stop="6549"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5157" g_stop="5333" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5334" i_stop="5625" i_length="292">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5626" g_stop="6249" g_length="624"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="801" r_length="624" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="+" ref_id="SGN-U575051" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>801</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U575051" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5157" e_stop="5333"/>
          <exon e_start="5626" e_stop="6249"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGATAGAAAGAGTATGAATAAGATATATATACATATAACATATATAGAGAGAGAAACAAAGAGTAAGAGAGACTAAACCCTAGATTTCATTCTGACTGAAAGCAGAGTATTTTGTATTTTGACCAACAAAGAGCTGTGTTTACATCTAATTTTTTTTCCGTCATTATTCATAAAGGTAAGTGATTAAAGTTTTTATTTTTTGAACACTTTATTAGTGTTAATGTTGTTTTATGTAATAAATGTTATGTGAAAAGAATAAAAAAATTGCTAATGGAGTTGTTTATATGTATGGTGATTATTAGGTGTAGGTTGGATTTGATCTTGTTTTTTTTTTTTAAAGATTGAAGTTTTTAACTATATTTTGTGAATGGGTTTCTGTTTTATTGATTGGATCATGTTTTTTGTTACTCTTTTGCTTGAAGTTTAATGAGTTAATTTTGATTCTTGGATTATACTCATTTTTTCAGATCTTTTTGAAATGTACTCAGTTTGATAAACAAGAAGAGGCTATTGGGTTTTGGTTGGTGGGTGTGATTCAGTCTGAGGAAGTTGTTTTGTGATGTATGTGGATTGAGTTTTTTGAAGAGAAAAAAAGTTTCTGTTTGGTCTGTTTTCTAATTTGAGGATCTGCTGAAGGAGTTTTTGCAAATAAAGGGCTTGTAAAGATGATGTCCAAATCTTATACCAACTTGCTAGATCTAGCATCTGGGAATTTCCCGGTGATGGGGCGGGAAAAGAAGCGGCTGCCACGGGTAATGACAGTTGCTGGAGTTATTTCTGAGCTTGATGATGATCAAGCTAATAGTGTTACATCAGATGTTCCATCATCAATTATTGTAGATCGAATAATTATAGTGGCTAATCAGCTCCCTGTAAAAGCTAAGCGTAGGTCGGATAATAAAGGATGGAATTTTAGTTGGGATGAGGATTCGTTGTTGTTGCACATAAAAGATGGGTTGCCAGATGATATGGAAGTTCTCTATGTTGGTTCTTTAAAGGTTGAGGTCGATTCAAGTGAACAGGATGATGTTTCACAGTTGCTGCTGGATAGATTTAAATGTGTTCCTGCTTTTCTACCTCCAGACATTTTA</genome_strand>
        <mrna_strand>ATTGATAGAAAGAGTATGAATAAGATATATATACATATAACATATATAGAGAGAGAAACAAAGAGTAAGAGAGACTAAACCCTAGATTTCATTCTGACTGAAAGCAGAGTATTTTGTATTTTGACCAACAAAGAGCTGTGTTTACATCTAATTTTTTTTCCGTCATTATTCATAAAG....................................................................................................................................................................................................................................................................................................ATCTTTTTGAAATGTACTCAGTTTGATAAACAAGAAGAGGCTATTGGGTTTTGGTTGGTGGGTGTGATTCAGTCTGAGGAAGTTGTTTTGTGATGTATGTGGATTGAGTTTTTTGAAGAGAAAAAAAGTTTCTGTTTGGTCTGTTTTCTAATTTGAGGATCTGCTGAAGGAGTTTTTGCAAATAAAGGGCTTGTAAAGATGATGTCCAAATCTTATACCAACTTGCTAGATCTAGCATCTGGGAATTTCCCGGTGATGGGGCGGGAAAAGAAGCGGCTGCCACGGGTAATGACAGTTGCTGGAGTTATTTCTGAGCTTGATGATGATCAAGCTAATAGTGTTACATCAGATGTTCCATCATCAATTATTGTAGATCGAATAATTATAGTGGCTAATCAGCTCCCTGTAAAAGCTAAGCGTAGGTCGNATAATAAAGGATGGAATTTTANTTGGGATGAGGANTCGTTGTTGTTGCACATAAAAGATGGGTTGCCAGANGATATGGAAGTTCTCTATGTTGGTTCTTTAAAGGNTGAGGTCGATTCAAGTGAACAGNATGANGTTTCACAGTTGCTGCTGGNNAGATTTAAATGNGTNCCTGCTTTTCTACCTCCANACNTTTNA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575049" ref_strand="+" ref_description="SGN-U575049 Tomato 200607#2 [26 ESTs aligned] (*GB) gi|188509954|gb|ACD56638.1| (e_value=0) trehalose; (*ATH) AT1G06410.1 (e_value=0) | Symbol: None | glycosyl transferase family 20 protein / trehalose-phosphatase family protein, contains Pfam profile: PF02358 trehalose-phosphatase | chr1:1955412-1958755 FORWARD | Aliases: T2D23.11, T2D23_11; (*SWP) sp|Q9LMI0|TPS7_ARATH (e_value=0) Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana GN=TPS7; ">
      <seq>gttgcacataaaagatgggttgccagatgatatggaagttctctatgttggttctttaaaggttgaggtcgattcaagtgaacaggatgatgtttcacagttgctgctggatagatttaaatgtgttcctgcttttctacctccagacattttatctaaatattatcacggtttttgcaaacagcatttatggcctcttttccattatatgcttccctactctgctagtcatggcagtcgatttgatcggtcgtggtgggaggcatatgttgcagcaaacaagatattttcccagaaggttattgaggtgataaatcccgaggatgactatgtctggatccatgattatcatttaatggttttacctacattcttgcgtaggcgtttcaatcggctgcgaatggggttctttctgcatagccctttcccttcatcagagatatataggacgcttccagtgagagaggagattctcaaggccctactgaattctgacctgattggtttccatacgttcgattatgcacggcatttcctatcctgttgtagtcgcatgttgggattagagtatcagtcaaagaggggttacattggacttgaatacttcggacggacagtggggatcaagattatgccagttgggattcacatgaggcagattgaaaatgtgcttcaactagcagataaagagtcgagagttgcagaacttaagcaacaatttgaaggtaaaactgttttacttggtgttgatgatatggacattttcaaaggtgtcgatttgaaacttctggcattggaggaaatgttaaaacaacatcctaagtggcaaggaagagcagtgctggtccagattgctaatccagctcgagcaaaaggaaaagatattgaggaaatacaagaagaaattcaaacaagcgtcaagagaatcaatgacaagtttagacagcctggttatgaacccatcgtgttcattgatcgcccagtttctcttagtgaacggactgcctattactctgttgctgagtgtgtagttgtaactgcagtaagagatggcatgaaccttacaccatatgaatacgttgtgtgtaggcagggcatccccggttcagagtgcactgcagagtccaatggtctgaaaagcagcatgctggtagtgtctgagttcattggctgttctccttctctaagtggtgctatacgtgtgaacccatggaatgtggaagcaactgcagaagcactgaatgaggcaatttcaatggctgatggtgagaaggtgttgcgccatgagaagcattacaagtatgtaagcacacatgacgtagcttattggtcaagaagcttcttccaggatctggagagaagttgcagagaccatttcaggcgacgttgctggggtataggcttgagcttcggttttagggttgtagcacttgatcctaattttaaaaagctatccattgacactattgtttctgcttactcaagagccaaaaatcgggcaatattgttggattatgatggcactctcatgcctcaaacagccatcaataaggtccctagtcccgaagttatttcaattattaactcactttgtggggatgaaagaaataccgtgtttcttgtgagtggacgaggaagggatagtttaggccagtggttttctccgtgtgagaaacttggtattgctgcggaacacggatacttcttaaggtggtctgcagataaagaatgggaagtcgtagggcagaacaatgatttccagtggatgcagatagctgaacctgttatgaaacagtatacagaagctacagatgggtcttccattgaaacaaaagagagtgctgttgtttggcattatcgagatgcagatcttggttttgggtcttgccaagctaaagagatgttagaccatcttgagagtgttcttgcaaatgagcctgttgctgtgaagagtgggcagttcattgttgaagttaagcctcagggagttagtaaaggtctagttgcagagaaaatttttgcaacaatggctgagagtggccggcaggctgactttgtgctgtgcgtaggtgatgataggtctgacgaggacatgtttgagattattggaaatgcaataaatagtggtatactttcttcaagcacggaagtgtatgcttgcacagtgggacaaaagccaagtaaagccacatattatcttgatgacaccgcagaagttagaaccatgcttcatgctcttgccgaggaatccattcctcctcctccatcagaaattgtaacatgaagctctgtttggagtatatccttttctgtacttctctgagtgcacaccacaatgactcaaccctttgaagttgtgcaaagaaaatatcattagagcttggactaacgcatgatgcatatttcattattactctcaaaaaatggaaggagagatattgtacagaattctttgtcagatggtcagtccgagcatcatcaagctaaaattagccttctcttcttcgaaagaaccttaactcctggggttgagatttaactgatcccaaatgttttaataccgagaagcattgctcggccagctggttatatgtgtgaagttgacactgaaggggagagcagtgccaaatggtaatcttcgtagccttcagaaaatatatacgcaagagactcatagaatggcagaggcaaatagagcttttgcacattttcgttaatccatgaacaggatctatacatctgtgctgcccttgttgaatacatactcttattcaagttacttttacgaaggccacacgtcagtttcttgtcttgcatatgacaagatggagcaacaattgtcaaagactcgtaacctgcattgttagatcaactgtgaacaggtgttttttcttctcttttgcttcatttatttaaggattccttcttttgcatctaggagtgaggttattattgttgttgggatacaccaatttgttggattctcataattgtaaatgctatagaattttaccttctcttttcttccttgtgatagagttcctaaactaaatttcgtaagctagaacatgacaaaaaaaaaccaggtgattgttaatagtgacatcaattattcttggtctttcaagtggtagtttgcagaacaaacatttgattcctaatatttgtaatataaaggtggaagtttatatctagctttgtgagcatcaagctgctttttaattctttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="+" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="5796" stop="10687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6096" g_stop="7805" g_length="1710"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1710" r_length="1710" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7806" i_stop="7892" i_length="87">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7893" g_stop="8166" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="1711" r_stop="1984" r_length="274" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8167" i_stop="9140" i_length="974">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="9141" g_stop="10387" g_length="1247"/>
          <reference_exon_boundary r_type="cDNA" r_start="1985" r_stop="3231" r_length="1247" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="+" ref_id="SGN-U575049" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>3231</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U575049" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6096" e_stop="7805"/>
          <exon e_start="7893" e_stop="8166"/>
          <exon e_start="9141" e_stop="10387"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGCACATAAAAGATGGGTTGCCAGATGATATGGAAGTTCTCTATGTTGGTTCTTTAAAGGTTGAGGTCGATTCAAGTGAACAGGATGATGTTTCACAGTTGCTGCTGGATAGATTTAAATGTGTTCCTGCTTTTCTACCTCCAGACATTTTATCTAAATATTATCACGGTTTTTGCAAACAGCATTTATGGCCTCTTTTCCATTATATGCTTCCCTACTCTGCTAGTCATGGCAGTCGATTTGATCGGTCGTGGTGGGAGGCATATGTTGCAGCAAACAAGATATTTTCCCAGAAGGTTATTGAGGTGATAAATCCCGAGGATGACTATGTCTGGATCCATGATTATCATTTAATGGTTTTACCTACATTCTTGCGTAGGCGTTTCAATCGGCTGCGAATGGGGTTCTTTCTGCATAGCCCTTTCCCTTCATCAGAGATATATAGGACGCTTCCAGTGAGAGAGGAGATTCTCAAGGCCCTACTGAATTCTGACCTGATTGGTTTCCATACGTTCGATTATGCACGGCATTTCCTATCCTGTTGTAGTCGCATGTTGGGATTAGAGTATCAGTCAAAGAGGGGTTACATTGGACTTGAATACTTCGGACGGACAGTGGGGATCAAGATTATGCCAGTTGGGATTCACATGAGGCAGATTGAAAATGTGCTTCAACTAGCAGATAAAGAGTCGAGAGTTGCAGAACTTAAGCAACAATTTGAAGGTAAAACTGTTTTACTTGGTGTTGATGATATGGACATTTTCAAAGGTGTCGATTTGAAACTTCTGGCATTGGAGGAAATGTTAAAACAACATCCTAAGTGGCAAGGAAGAGCAGTGCTGGTCCAGATTGCTAATCCAGCTCGAGCAAAAGGAAAAGATATTGAGGAAATACAAGAAGAAATTCAAACAAGCGTCAAGAGAATCAATGACAAGTTTAGACAGCCTGGTTATGAACCCATCGTGTTCATTGATCGCCCAGTTTCTCTTAGTGAACGGACTGCCTATTACTCTGTTGCTGAGTGTGTAGTTGTAACTGCAGTAAGAGATGGCATGAACCTTACACCATATGAATACGTTGTGTGTAGGCAGGGCATCCCCGGTTCAGAGTGCACTGCAGAGTCCAATGGTCTGAAAAGCAGCATGCTGGTAGTGTCTGAGTTCATTGGCTGTTCTCCTTCTCTAAGTGGTGCTATACGTGTGAACCCATGGAATGTGGAAGCAACTGCAGAAGCACTGAATGAGGCAATTTCAATGGCTGATGGTGAGAAGGTGTTGCGCCATGAGAAGCATTACAAGTATGTAAGCACACATGACGTAGCTTATTGGTCAAGAAGCTTCTTCCAGGATCTGGAGAGAAGTTGCAGAGACCATTTCAGGCGACGTTGCTGGGGTATAGGCTTGAGCTTCGGTTTTAGGGTTGTAGCACTTGATCCTAATTTTAAAAAGCTATCCATTGACACTATTGTTTCTGCTTACTCAAGAGCCAAAAATCGGGCAATATTGTTGGATTATGATGGCACTCTCATGCCTCAAACAGCCATCAATAAGGTCCCTAGTCCCGAAGTTATTTCAATTATTAACTCACTTTGTGGGGATGAAAGAAATACCGTGTTTCTTGTGAGTGGACGAGGAAGGGATAGTTTAGGCCAGTGGTTTTCTCCGTGTGAGAAACTTGGTATTGCTGCGGAACACGGATACTTCTTAAGGTATTCTTGGAACAAGCTTGTTCTCATTTCGTGCCTATTTGTCATCTCCCGTATATCAGTATGAACTTAATTGTCTTTAATTACCAGGTGGTCTGCAGATAAAGAATGGGAAGTCGTAGGGCAGAACAATGATTTCCAGTGGATGCAGATAGCTGAACCTGTTATGAAACAGTATACAGAAGCTACAGATGGGTCTTCCATTGAAACAAAAGAGAGTGCTGTTGTTTGGCATTATCGAGATGCAGATCTTGGTTTTGGGTCTTGCCAAGCTAAAGAGATGTTAGACCATCTTGAGAGTGTTCTTGCAAATGAGCCTGTTGCTGTGAAGAGTGGGCAGTTCATTGTTGAAGTTAAGCCTCAGGTGTGCCATCTCTTAATCTTTGCATTTGACTCTTGTTTTTTGGATGAACATTATTCTATTTCACATAATCTCCATTCATCCATTGGACCTGCTCTAATCTCCAGCTATATACTGAGTCGTTGATTTGTCTTCTATCTTGACATGCTTTATAATTCTTTTATGTATGGGTGCTACTATATACTGAGTAGCTGTATTTTCTTATAACACCAGGGAATGATCAGACTGTTTGTGAAGTGTCTTTACTGATTCTAGATTAATGCAGACATTAAAAGCTGCTTCAATCAAATATATGCAATTTTTTCAAATCTGTCATATTTCATGGAAGTAATTAAAGGTGATGGTTGAAATATTTTTGGAGTTTGGTGTTTAATCTATGAAGATTTTTGGTACTGTAAGCCAAGATAGTGCAACTGTCAGTTTGGACGAAGTCAAACAGATGATAATCACTCAGATGGTGCATGTTAAAATATCTTAATCAATTGCAAGGAGTTTTAGAACAGAAAAAAGTAGACACCTTCTTGTCCTTTTTGGTTCTGTTTGTCATATTGAAGCCATGCATGAGATTTTGCCAAGTTACTGTTGGTTTGATTCATGAATTCTGATAAATTATTACAAACAACTGCAGCAAATAACTTTTTATTCGTTAGATTTATGCCTTGATTAAATAACTAAGTACTTCCAGCATAATGCCAAACAGGTAGGGAATATATTACTCATTTCTTAATAACAAGAACAGAAACAACTACTTTCCTGATACATGTACTTTTCAGTTCTCAACAGAATGTGAGCGCCAGAAAATTTTAGTTAATTATATTGTTGAATAGGATGGCTCGTATGCTTTCCTAAATAGTCTTCTTGTTATAGCTGTATTCTCTTTTCTACCTGTTTTATCTCATACACATCCATGTGGCCTTTTTTGTTTTCTTTTGCCGCCTCGAGTTTATTTTTAACTTTATTTTTTGCATCAATTCCAGGGAGTTAGTAAAGGTCTAGTTGCAGAGAAAATTTTTGCAACAATGGCTGAGAGTGGCCGGCAGGCTGACTTTGTGCTGTGCGTAGGTGATGATAGGTCTGACGAGGACATGTTTGAGATTATTGGAAATGCAATAAATAGTGGTATACTTTCTTCAAGCACGGAAGTGTATGCTTGCACAGTGGGACAAAAGCCAAGTAAAGCCACATATTATCTTGATGACACCGCAGAAGTTAGAACCATGCTTCATGCTCTTGCCGAGGAATCCATTCCTCCTCCTCCATCAGAAATTGTAACATGAAGCTCTGTTTGGAGTATATCCTTTTCTGTACTTCTCTGAGTGCACACCACAATGACTCAACCCTTTGAAGTTGTGCAAAGAAAATATCATTAGAGCTTGGACTAACGCATGATGCATATTTCATTATTACTCTCAAAAAATGGAAGGAGAGATATTGTACAGAATTCTTTGTCAGATGGTCAGTCCGAGCATCATCAAGCTAAAATTAGCCTTCTCTTCTTCGAAAGAACCTTAACTCCTGGGGTTGAGATTTAACTGATCCCAAATGTTTTAATACCGAGAAGCATTGCTCGGCCAGCTGGTTATATGTGTGAAGTTGACACTGAAGGGGAGAGCAGTGCCAAATGGTAATCTTCGTAGCCTTCAGAAAATATATACGCAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAATCCATGAACAGGATCTATACATCTGTGCTGCCCTTGTTGAATACATACTCTTATTCAAGTTACTTTTACGAAGGCCACACGTCAGTTTCTTGTCTTGCATATGACAAGATGGAGCAACAATTGTCAAAGACTCGTAACCTGCATTGTTAGATCAACTGTGAACAGGTGTTTTTTCTTCTCTTTTGCTTCATTTATTTAAGGATTCCTTCTTTTGCATCTAGGAGTGAGGTTATTATTGTTGTTGGGATACACCAATTTGTTGGATTCTCATAATTGTAAATGCTATAGAATTTTACCTTCTCTTTTCTTCCTTGTGATAGAGTTCCTAAACTAAATTTCGTAAGCTAGAACATGACAAAAAAAAACCAGGTGATTGTTAATAGTGACATCAATTATTCTTGGTCTTTCAAGTGGTAGTTTGCAGAACAAACATTTGATTCCTAATATTTGTAATATAAAGGTGGAAGTTTATATCTAGCTTTGTGAGCATCAAGCTGCTTTTTAATTCTTTCTT</genome_strand>
        <mrna_strand>GTTGCACATAAAAGATGGGTTGCCAGATGATATGGAAGTTCTCTATGTTGGTTCTTTAAAGGTTGAGGTCGATTCAAGTGAACAGGATGATGTTTCACAGTTGCTGCTGGATAGATTTAAATGTGTTCCTGCTTTTCTACCTCCAGACATTTTATCTAAATATTATCACGGTTTTTGCAAACAGCATTTATGGCCTCTTTTCCATTATATGCTTCCCTACTCTGCTAGTCATGGCAGTCGATTTGATCGGTCGTGGTGGGAGGCATATGTTGCAGCAAACAAGATATTTTCCCAGAAGGTTATTGAGGTGATAAATCCCGAGGATGACTATGTCTGGATCCATGATTATCATTTAATGGTTTTACCTACATTCTTGCGTAGGCGTTTCAATCGGCTGCGAATGGGGTTCTTTCTGCATAGCCCTTTCCCTTCATCAGAGATATATAGGACGCTTCCAGTGAGAGAGGAGATTCTCAAGGCCCTACTGAATTCTGACCTGATTGGTTTCCATACGTTCGATTATGCACGGCATTTCCTATCCTGTTGTAGTCGCATGTTGGGATTAGAGTATCAGTCAAAGAGGGGTTACATTGGACTTGAATACTTCGGACGGACAGTGGGGATCAAGATTATGCCAGTTGGGATTCACATGAGGCAGATTGAAAATGTGCTTCAACTAGCAGATAAAGAGTCGAGAGTTGCAGAACTTAAGCAACAATTTGAAGGTAAAACTGTTTTACTTGGTGTTGATGATATGGACATTTTCAAAGGTGTCGATTTGAAACTTCTGGCATTGGAGGAAATGTTAAAACAACATCCTAAGTGGCAAGGAAGAGCAGTGCTGGTCCAGATTGCTAATCCAGCTCGAGCAAAAGGAAAAGATATTGAGGAAATACAAGAAGAAATTCAAACAAGCGTCAAGAGAATCAATGACAAGTTTAGACAGCCTGGTTATGAACCCATCGTGTTCATTGATCGCCCAGTTTCTCTTAGTGAACGGACTGCCTATTACTCTGTTGCTGAGTGTGTAGTTGTAACTGCAGTAAGAGATGGCATGAACCTTACACCATATGAATACGTTGTGTGTAGGCAGGGCATCCCCGGTTCAGAGTGCACTGCAGAGTCCAATGGTCTGAAAAGCAGCATGCTGGTAGTGTCTGAGTTCATTGGCTGTTCTCCTTCTCTAAGTGGTGCTATACGTGTGAACCCATGGAATGTGGAAGCAACTGCAGAAGCACTGAATGAGGCAATTTCAATGGCTGATGGTGAGAAGGTGTTGCGCCATGAGAAGCATTACAAGTATGTAAGCACACATGACGTAGCTTATTGGTCAAGAAGCTTCTTCCAGGATCTGGAGAGAAGTTGCAGAGACCATTTCAGGCGACGTTGCTGGGGTATAGGCTTGAGCTTCGGTTTTAGGGTTGTAGCACTTGATCCTAATTTTAAAAAGCTATCCATTGACACTATTGTTTCTGCTTACTCAAGAGCCAAAAATCGGGCAATATTGTTGGATTATGATGGCACTCTCATGCCTCAAACAGCCATCAATAAGGTCCCTAGTCCCGAAGTTATTTCAATTATTAACTCACTTTGTGGGGATGAAAGAAATACCGTGTTTCTTGTGAGTGGACGAGGAAGGGATAGTTTAGGCCAGTGGTTTTCTCCGTGTGAGAAACTTGGTATTGCTGCGGAACACGGATACTTCTTAAG.......................................................................................GTGGTCTGCAGATAAAGAATGGGAAGTCGTAGGGCAGAACAATGATTTCCAGTGGATGCAGATAGCTGAACCTGTTATGAAACAGTATACAGAAGCTACAGATGGGTCTTCCATTGAAACAAAAGAGAGTGCTGTTGTTTGGCATTATCGAGATGCAGATCTTGGTTTTGGGTCTTGCCAAGCTAAAGAGATGTTAGACCATCTTGAGAGTGTTCTTGCAAATGAGCCTGTTGCTGTGAAGAGTGGGCAGTTCATTGTTGAAGTTAAGCCTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTTAGTAAAGGTCTAGTTGCAGAGAAAATTTTTGCAACAATGGCTGAGAGTGGCCGGCAGGCTGACTTTGTGCTGTGCGTAGGTGATGATAGGTCTGACGAGGACATGTTTGAGATTATTGGAAATGCAATAAATAGTGGTATACTTTCTTCAAGCACGGAAGTGTATGCTTGCACAGTGGGACAAAAGCCAAGTAAAGCCACATATTATCTTGATGACACCGCAGAAGTTAGAACCATGCTTCATGCTCTTGCCGAGGAATCCATTCCTCCTCCTCCATCAGAAATTGTAACATGAAGCTCTGTTTGGAGTATATCCTTTTCTGTACTTCTCTGAGTGCACACCACAATGACTCAACCCTTTGAAGTTGTGCAAAGAAAATATCATTAGAGCTTGGACTAACGCATGATGCATATTTCATTATTACTCTCAAAAAATGGAAGGAGAGATATTGTACAGAATTCTTTGTCAGATGGTCAGTCCGAGCATCATCAAGCTAAAATTAGCCTTCTCTTCTTCGAAAGAACCTTAACTCCTGGGGTTGAGATTTAACTGATCCCAAATGTTTTAATACCGAGAAGCATTGCTCGGCCAGCTGGTTATATGTGTGAAGTTGACACTGAAGGGGAGAGCAGTGCCAAATGGTAATCTTCGTAGCCTTCAGAAAATATATACGCAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAATCCATGAACAGGATCTATACATCTGTGCTGCCCTTGTTGAATACATACTCTTATTCAAGTTACTTTTACGAAGGCCACACGTCAGTTTCTTGTCTTGCATATGACAAGATGGAGCAACAATTGTCAAAGACTCGTAACCTGCATTGTTAGATCAACTGTGAACAGGTGTTTTTTCTTCTCTTTTGCTTCATTTATTTAAGGATTCCTTCTTTTGCATCTAGGAGTGAGGTTATTATTGTTGTTGGGATACACCAATTTGTTGGATTCTCATAATTGTAAATGCTATAGAATTTTACCTTCTCTTTTCTTCCTTGTGATAGAGTTCCTAAACTAAATTTCGTAAGCTAGAACATGACAAAAAAAAACCAGGTGATTGTTAATAGTGACATCAATTATTCTTGGTCTTTCAAGTGGTAGTTTGCAGAACAAACATTTGATTCCTAATATTTGTAATATAAAGGTGGAAGTTTATATCTAGCTTTGTGAGCATCAAGCTGCTTTTTAATTCTTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570185" ref_strand="+" ref_description="SGN-U570185 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>tctctagtgggtaccccgggctgcaggaatttcgcacgagagacattaaaagctgcttcaatcaaatatatgcaattttttcaaatctgtcatatttcatggaagtaattaaaggtgatggttgaaatatttttggagtttggtgtttaatctatgaagatttttggtactgtaagccaagatagtgcaactgtcagtttggacgaagtcaaacagatgataatcactcagatggtgcatgttaaaatatcttaatcaattgcaaggagttttagaacagaaaaaagtagacaccttcttgtcctttttggttctgtttgtcatattgaagccatgcatgagattttgccaagttactgttggtttgattcatgaattctgataaattattacaaacaactgcagcaaataactttttattcgttagatttatgccttgattaaataactaagtacttccagcataatgccaaacaggtagggaatatattactcatttcttaataacaagaacagaaacaactactttcctgatacatgtacttttcagttctcaacagaatgtgagcgccagaaaattttagttaattatattgttgaataggatggctcgtatgctttcctaaatagtcttcttgttatagctgtattctcttttctacctgttttatctcatacacatccatgtggccttttttgttttcttttgccgcctcgagtttattttaactttattttttgcatcatttccagggagttagtaaaggtctagttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="+" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="8127" stop="9463"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8429" g_stop="9163" g_length="735"/>
          <reference_exon_boundary r_type="cDNA" r_start="43" r_stop="776" r_length="734" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="+" ref_id="SGN-U570185" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="0.947" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U570185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8429" e_stop="9163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATTAAAAGCTGCTTCAATCAAATATATGCAATTTTTTCAAATCTGTCATATTTCATGGAAGTAATTAAAGGTGATGGTTGAAATATTTTTGGAGTTTGGTGTTTAATCTATGAAGATTTTTGGTACTGTAAGCCAAGATAGTGCAACTGTCAGTTTGGACGAAGTCAAACAGATGATAATCACTCAGATGGTGCATGTTAAAATATCTTAATCAATTGCAAGGAGTTTTAGAACAGAAAAAAGTAGACACCTTCTTGTCCTTTTTGGTTCTGTTTGTCATATTGAAGCCATGCATGAGATTTTGCCAAGTTACTGTTGGTTTGATTCATGAATTCTGATAAATTATTACAAACAACTGCAGCAAATAACTTTTTATTCGTTAGATTTATGCCTTGATTAAATAACTAAGTACTTCCAGCATAATGCCAAACAGGTAGGGAATATATTACTCATTTCTTAATAACAAGAACAGAAACAACTACTTTCCTGATACATGTACTTTTCAGTTCTCAACAGAATGTGAGCGCCAGAAAATTTTAGTTAATTATATTGTTGAATAGGATGGCTCGTATGCTTTCCTAAATAGTCTTCTTGTTATAGCTGTATTCTCTTTTCTACCTGTTTTATCTCATACACATCCATGTGGCCTTTTTTGTTTTCTTTTGCCGCCTCGAGTTTATTTTTAACTTTATTTTTTGCATCAATTCCAGGGAGTTAGTAAAGGTCTAGTTGC</genome_strand>
        <mrna_strand>ACATTAAAAGCTGCTTCAATCAAATATATGCAATTTTTTCAAATCTGTCATATTTCATGGAAGTAATTAAAGGTGATGGTTGAAATATTTTTGGAGTTTGGTGTTTAATCTATGAAGATTTTTGGTACTGTAAGCCAAGATAGTGCAACTGTCAGTTTGGACGAAGTCAAACAGATGATAATCACTCAGATGGTGCATGTTAAAATATCTTAATCAATTGCAAGGAGTTTTAGAACAGAAAAAAGTAGACACCTTCTTGTCCTTTTTGGTTCTGTTTGTCATATTGAAGCCATGCATGAGATTTTGCCAAGTTACTGTTGGTTTGATTCATGAATTCTGATAAATTATTACAAACAACTGCAGCAAATAACTTTTTATTCGTTAGATTTATGCCTTGATTAAATAACTAAGTACTTCCAGCATAATGCCAAACAGGTAGGGAATATATTACTCATTTCTTAATAACAAGAACAGAAACAACTACTTTCCTGATACATGTACTTTTCAGTTCTCAACAGAATGTGAGCGCCAGAAAATTTTAGTTAATTATATTGTTGAATAGGATGGCTCGTATGCTTTCCTAAATAGTCTTCTTGTTATAGCTGTATTCTCTTTTCTACCTGTTTTATCTCATACACATCCATGTGGCCTTTTTTGTTTTCTTTTGCCGCCTCGAGTTTA-TTTTAACTTTATTTTTTGCATCATTTCCAGGGAGTTAGTAAAGGTCTAGTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U571807" ref_strand="+" ref_description="SGN-U571807 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157354700|emb|CAO48018.1| (e_value=6e-42) unnamed; (*ATH) AT1G29300.1 (e_value=4e-38) | Symbol: None | expressed protein, contains Pfam profile PF04859: Plant protein of unknown function (DUF641 | chr1:10247766-10249580 REVERSE | Aliases: F28N24.3, F28N24_3; ">
      <seq>gcttcttctctgtttgggaaattcttgaaagccaaataccttcatttagttcatcccaaaatggagttttccttttccgggaacttaaaccagaggaaacttgtgaactccggcgagttcccggaaacagagttcttcaaagttttcagcgagatgggtcggcgcgtgtggcttttacattgcttagcattctctttcgatcaacaagttagcatttttcaagttcggaaaaactccagattctcagaggtctacatggaaagcatcacagacgagattttctccttcgccggcggcgaattcaaggtggcgttcacggtggttcccggttataaaatcggtcaaacagtagtccaaagtcaggtatatttatctccggtcactcctccgtccaagcactaatgggaaatcaagtaaaaaatcacatccccactcgcttaaaatcaccacgcgccgcctcaatcacagtggtagatctcctctctccggccgcagcatgtacatggttatcaaacttccttcaataaaatgggctcatctaaaaacagaacagatcacggtggcgcgtgaggtgtacgcggtacggattatatgtgttgagaatgtgatgggccttggtccaaaagtattaagtgggcttttgggcccacatagtgaaagtggttcagggctgtgaagtggatgatttggagtatagtgaagaaaagattgggcggtgaagacaaaaggcaaagtaggctcagtcaggtagtgggcccaataaggcatacgtctttgttttctttggtatatcacaaaagtagaaagagggaccctttatctctgaattaaaaaaaaagaagaagaaactaaaaatgttgtttattcctcaaattgtacgttaaagaatgacagacaatatgcctgcaacttgcatatcagattatataatgtgtataaacaattagctaaactattacttagtatatacatagtatatataatgaatattagcattgtgcatggtatctttgctttgaattttggatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="-" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="13852" stop="12224"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13553" g_stop="12524" g_length="1030"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1030" r_length="1030" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="-" ref_id="SGN-U571807" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1030</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U571807" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13553" e_stop="12524"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTCTTCTCTGTTTGGGAAATTCTTGAAAGCCAAATACCTTCATTTAGTTCATCCCAAAATGGAGTTTTCCTTTTCCGGGAACTTAAACCAGAGGAAACTTGTGAACTCCGGCGAGTTCCCGGAAACAGAGTTCTTCAAAGTTTTCAGCGAGATGGGTCGGCGCGTGTGGCTTTTACATTGCTTAGCATTCTCTTTCGATCAACAAGTTAGCATTTTTCAAGTTCGGAAAAACTCCAGATTCTCAGAGGTCTACATGGAAAGCATCACAGACGAGATTTTCTCCTTCGCCGGCGGCGAATTCAAGGTGGCGTTCACGGTGGTTCCCGGTTTTAAAATCGGTCAAACAGTAGTCCAAAGTCAGGTATATTTATCTCCGGTCACTCCTCCGTCCAAGCACTAATGGGAAATCAAGTAAAAAATCACATCCCCACTCGCTTAAAATCACCACGCGCCGCCTCAATCACAGTGGTAGATCTCCTCTCTCCGGCCGCAGCATGTACATGGTTATCAAACTTCCTTCAATAAAATGGGCTCATCTAAAAACAGAACAGATCACGGTGGCGCGTGAGGTGTACGCGGTACGGATTATATGTGTTGAGAATGTGATGGGCCTTGGTCCAAAAGTATTAAGTGGGCTTTTGGGCCCACATAGTGAAAGTGGTTCAGGGCTGTGAAGTGGATGATTTGGAGTATAGTGAAGAAAAGATTGGGCGGTGAAGACAAAAGGCAAAGTAGGCTCAGTCAGGTAGTGGGCCCAATAAGGCATACGTCTTTGTTTTCTTTGGTATATCACAAAAGTAGAAAGAGGGACCCTTTATCTCTGAATTAAAAAAAAAGAAGAAGAAACTAAAAATGTTGTTTATTCCTCAAATTGTACGTTAAAGAATGACAGACAATATGCCTGCAACTTGCATATCAGATTATATAATGTGTATAAACAATTAGCTAAACTATTACTTAGTATATACATAGTATATATAATGAATATTAGCATTGTGCATGGTATCTTTGCTTTGAATTTTGGATCT</genome_strand>
        <mrna_strand>GCTTCTTCTCTGTTTGGGAAATTCTTGAAAGCCAAATACCTTCATTTAGTTCATCCCAAAATGGAGTTTTCCTTTTCCGGGAACTTAAACCAGAGGAAACTTGTGAACTCCGGCGAGTTCCCGGAAACAGAGTTCTTCAAAGTTTTCAGCGAGATGGGTCGGCGCGTGTGGCTTTTACATTGCTTAGCATTCTCTTTCGATCAACAAGTTAGCATTTTTCAAGTTCGGAAAAACTCCAGATTCTCAGAGGTCTACATGGAAAGCATCACAGACGAGATTTTCTCCTTCGCCGGCGGCGAATTCAAGGTGGCGTTCACGGTGGTTCCCGGTTATAAAATCGGTCAAACAGTAGTCCAAAGTCAGGTATATTTATCTCCGGTCACTCCTCCGTCCAAGCACTAATGGGAAATCAAGTAAAAAATCACATCCCCACTCGCTTAAAATCACCACGCGCCGCCTCAATCACAGTGGTAGATCTCCTCTCTCCGGCCGCAGCATGTACATGGTTATCAAACTTCCTTCAATAAAATGGGCTCATCTAAAAACAGAACAGATCACGGTGGCGCGTGAGGTGTACGCGGTACGGATTATATGTGTTGAGAATGTGATGGGCCTTGGTCCAAAAGTATTAAGTGGGCTTTTGGGCCCACATAGTGAAAGTGGTTCAGGGCTGTGAAGTGGATGATTTGGAGTATAGTGAAGAAAAGATTGGGCGGTGAAGACAAAAGGCAAAGTAGGCTCAGTCAGGTAGTGGGCCCAATAAGGCATACGTCTTTGTTTTCTTTGGTATATCACAAAAGTAGAAAGAGGGACCCTTTATCTCTGAATTAAAAAAAAAGAAGAAGAAACTAAAAATGTTGTTTATTCCTCAAATTGTACGTTAAAGAATGACAGACAATATGCCTGCAACTTGCATATCAGATTATATAATGTGTATAAACAATTAGCTAAACTATTACTTAGTATATACATAGTATATATAATGAATATTAGCATTGTGCATGGTATCTTTGCTTTGAATTTTGGATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U576406" ref_strand="+" ref_description="SGN-U576406 Tomato 200607#2 [6 ESTs aligned] (*GB) gi|157354700|emb|CAO48018.1| (e_value=4e-67) unnamed; (*ATH) AT1G29300.1 (e_value=3e-65) | Symbol: None | expressed protein, contains Pfam profile PF04859: Plant protein of unknown function (DUF641 | chr1:10247766-10249580 REVERSE | Aliases: F28N24.3, F28N24_3; ">
      <seq>gcttggcttttactacccaacttccatttttttccttttatcttcaaccttgaatcaaacaagagggactctgcttttccctccttttcttctctgtccatttttttctctctttttttccactttctcagcacacccttttgctttctaccttcagttcacacttgtcaagactccatatttttcatgtcctaaaaatcactgattttgcttgcctactctgttttactctgtttcagcaatatcaaaatggaatctgtgagaccagctccggctcctagtaaaagcaggttagctaagacatttcagagagtaatccatcggaaaaactcttcaaaaccattttccaataatgggttttgcctactcatacctcaagaaaagcttaggtgctgtgagtcgcagcactttgataaagaagaaattgaagagtgtaaagaacataccaaaaacagagcggttatggaggcttttgttgctaagctttttgctacaatttcttctgttaaagctgcgtatgctgagcttcagctggctcagttcccttatgatagtgaagctattcaagttgcagatcaagctgtggtggatgaactcaaagctttgtctgagcttaaacatagttatatcaaaaaacaaattgattcttcaccaccccatgtaactttaatgcttgctgagattcaagaacagcaatctgtcatgaaaacttatgaaatcaccatgaagaaaatgcagggagaaattgaatctaaagggtacaacatatcttctctacaaaaggagctacaagaaaccattcacaacaatagatcactcgaaagaaagctcaacgccagtggatcattctccattcttgacaatgtcaaattttcagatgtaaatcctaaagatttcatcatggttttacactacgccatgagatctatccgaaattttgtcaagttcttgattcgggaaatggagtctgcaaattgggatattgatgctgctacgaaatctattcaaaatggtgtcactttccacaagagtaatcatanggcttttgcgtttgagtcttttgtttgcagagagatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="-" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="15070" stop="13394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14771" g_stop="13693" g_length="1079"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1079" r_length="1079" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="-" ref_id="SGN-U576406" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1079</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U576406" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14771" e_stop="13693"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTGGCTTTTACTACCCAACTTCCATTTTTTTCCTTTTATCTTCAACCTTGAATCAAACAAGAGGGACTCTGCTTTTCCCTCCTTTTCTTCTCTGTCCATTTTTTTCTCTCTTTTTTTCCACTTTCTCAGCACACCCTTTTGCTTTCTACCTTCAGTTCACACTTGTCAAGACTCCATATTTTTCATGTCCTAAAAATCACTGATTTTGCTTGCCTACTCTGTTTTACTCTGTTTCAGCAATATCAAAATGGAATCTGTGAGACCAGCTCCGGCTCCTAGTAAAAGCAGGTTAGCTAAGACATTTCAGAGAGTAATCCATCGGAAAAACTCTTCAAAACCATTTTCCAATAATGGGTTTTGCCTACTCATACCTCAAGAAAAGCTTAGGTGCTGTGAGTCGCAGCACTTTGATAAAGAAGAAATTGAAGAGTGTAAAGAACATACCAAAAACAGAGCGGTTATGGAGGCTTTTGTTGCTAAGCTTTTTGCTACAATTTCTTCTGTTAAAGCTGCGTATGCTGAGCTTCAGCTGGCTCAGTTCCCTTATGATAGTGAAGCTATTCAAGTTGCAGATCAAGCTGTGGTGGATGAACTCAAAGCTTTGTCTGAGCTTAAACATAGTTATATCAAAAAACAAATTGATTCTTCACCACCCCATGTAACTTTAATGCTTGCTGAGATTCAAGAACAGCAATCTGTCATGAAAACTTATGAAATCACCATGAAGAAAATGCAGGGAGAAATTGAATCTAAAGGGTACAACATATCTTCTCTACAAAAGGAGCTACAAGAAACCATTCACAACAATAGATCACTCGAAAGAAAGCTCAACGCCAGTGGATCATTCTCCATTCTTGACAATGTCAAATTTTCAGATGTAAATCCTAAAGATTTCATCATGGTTTTACACTACGCCATGAGATCTATCCGAAATTTTGTCAAGTTCTTGATTCGGGAAATGGAGTCTGCAAATTGGGATATTGATGCTGCTACGAAATCTATTCAAAATGGTGTCACTTTCCACAAGAGTAATCATAGGGCTTTTGCGTTTGAGTCTTTTGTTTGCAGAGAGATTTT</genome_strand>
        <mrna_strand>GCTTGGCTTTTACTACCCAACTTCCATTTTTTTCCTTTTATCTTCAACCTTGAATCAAACAAGAGGGACTCTGCTTTTCCCTCCTTTTCTTCTCTGTCCATTTTTTTCTCTCTTTTTTTCCACTTTCTCAGCACACCCTTTTGCTTTCTACCTTCAGTTCACACTTGTCAAGACTCCATATTTTTCATGTCCTAAAAATCACTGATTTTGCTTGCCTACTCTGTTTTACTCTGTTTCAGCAATATCAAAATGGAATCTGTGAGACCAGCTCCGGCTCCTAGTAAAAGCAGGTTAGCTAAGACATTTCAGAGAGTAATCCATCGGAAAAACTCTTCAAAACCATTTTCCAATAATGGGTTTTGCCTACTCATACCTCAAGAAAAGCTTAGGTGCTGTGAGTCGCAGCACTTTGATAAAGAAGAAATTGAAGAGTGTAAAGAACATACCAAAAACAGAGCGGTTATGGAGGCTTTTGTTGCTAAGCTTTTTGCTACAATTTCTTCTGTTAAAGCTGCGTATGCTGAGCTTCAGCTGGCTCAGTTCCCTTATGATAGTGAAGCTATTCAAGTTGCAGATCAAGCTGTGGTGGATGAACTCAAAGCTTTGTCTGAGCTTAAACATAGTTATATCAAAAAACAAATTGATTCTTCACCACCCCATGTAACTTTAATGCTTGCTGAGATTCAAGAACAGCAATCTGTCATGAAAACTTATGAAATCACCATGAAGAAAATGCAGGGAGAAATTGAATCTAAAGGGTACAACATATCTTCTCTACAAAAGGAGCTACAAGAAACCATTCACAACAATAGATCACTCGAAAGAAAGCTCAACGCCAGTGGATCATTCTCCATTCTTGACAATGTCAAATTTTCAGATGTAAATCCTAAAGATTTCATCATGGTTTTACACTACGCCATGAGATCTATCCGAAATTTTGTCAAGTTCTTGATTCGGGAAATGGAGTCTGCAAATTGGGATATTGATGCTGCTACGAAATCTATTCAAAATGGTGTCACTTTCCACAAGAGTAATCATANGGCTTTTGCGTTTGAGTCTTTTGTTTGCAGAGAGATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U579118" ref_strand="+" ref_description="SGN-U579118 Tomato 200607#2 [53 ESTs aligned] (*GB) gi|15226261|ref|NP_180972.1| (e_value=0) protein transport protein SEC61 alpha subunit -related [Arabidopsis thaliana]; (*ATH) AT2G34250.1 (e_value=0) | Symbol: None | protein transport protein sec61, putative, similar to PfSec61 (Plasmodium falciparum) GI:3057044; contains Pfam profile PF00344: eubacterial secY protein | chr2:14469168-14471941 FORWARD | Aliases: F13P17.9, F13P17_9; (*SWP) sp|Q54XK2|SC61A_DICDI (e_value=0) Protein transport protein Sec61 subunit alpha OS=Dictyostelium discoideum GN=sec61a; ">
      <seq>ggcgattggcggccaatcggccgaattggttctccatctctgttaactggtgacgcttacacataaatccgtcagatccgccccttctctccctctcctctctctcatggtcaaaaccctacaaatagaagcatagctcgacggagaaatcgagcgaataacagtccacggacatctccagatcgtcgctacctctagatagttctgttaatagtgaacaatgggaggaggattcagagtgctgcaccttgtgaaaccatttctttcttttctacctgaagttcagagtgctgacaggaaggttcaattcaaagagaaggtcatctatactgtaattgcgcttgctatttttctggtttgcagtcagctccctctttatggcatacactctacaactggcgcggatcctttttactggatgcgtgtcattcttgcctcaaaccgtggtacagtcatggaacttggaattactccaattgtgacttctggaatggtgatgcaattgttagctggatcaaaaatcattcaagtggacaacaatgttcgggaggaccgagcactccttaatggtgctcaaaagctattgggtatcctgattgctgtcggtgaggcagttgcttatgtcctgtcggggatgtatggcagtgttagccaattgggtgttggaaatgctatcctcattatcctccaactctgctttgctgctatcattgtcatgtgcttagatgaacttcttcagaaaggatatggtcttggctctggaatttccttgttcatagctaccaatatctgtgaaagcattatctggaaagcatttagtcccacaaccatcaataccgggcgtggtgctgaatttgaaggagctataattgctctgttccatcttactattactagatctaataggattagtgccttgcgtgaggctttctaccggcaaagtctccccaatgtgacaaatctgcttgcaactgtgttgatcttcctcatcgttatctacttccaaggattccgtgtagttttacctgttagatctaagaatgctcgtggacagcaaggttcttacccaattaaactcttctacacctcaaacatgcctattattttgcagtccgcacttgtctcaaacctgtatttcatctctcagttgctctacaggagatatggaggaaatttcatcgtggatatgataggaacttggaaagaatctgaatattctggacaatctgttcctgttgctggtcttgcttaccttgtcactgcgccatcaagcttggcagaaatggtgtcgcatccgttccatgctcttttctatatagtgttcatgttatcagcctgtgccctgttctcaaagacctggattgaagtttctggatcgtctgccagagatgttgccaaacagctcaaggagcaacaaatggtgatgcctggtcatcgtgattccaacctgcagaaggaactaaatcgttacatacctactgcagctgcctttggaggagtttgcattggtgcattgacagttttggcagacttgatgggagcgattggatcaggaactggaatccttcttgcagtcacaatcatttaccagtattttgagacattcgagaaggagaaggccactgaactaggcatgtttggtttgtaggctgtagcgtttatgctagaatgtccctccaagccaagagagcaatgtagtgaacttgttggcttataatggatagatattagaggccacaagtttttcctgttaaattttgtaagtttttttttttgtttttaactgtgctgatgagcgcccgaatgttttacatgaaaagactaggttaatttacagaaattctcaaaggatattttacatgatacaagcatcgggccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="-" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="33939" stop="28626"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33639" g_stop="33472" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="196" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33471" i_stop="32226" i_length="1246">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32225" g_stop="31858" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="564" r_length="368" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31857" i_stop="31348" i_length="510">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31347" g_stop="31120" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="792" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31119" i_stop="31031" i_length="89">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31030" g_stop="30676" g_length="355"/>
          <reference_exon_boundary r_type="cDNA" r_start="793" r_stop="1147" r_length="355" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30675" i_stop="30566" i_length="110">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30565" g_stop="30441" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1148" r_stop="1272" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="30440" i_stop="30307" i_length="134">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.565" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="30306" g_stop="30171" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1273" r_stop="1408" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="30170" i_stop="29397" i_length="774">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.897" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="29396" g_stop="28926" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="1409" r_stop="1879" r_length="471" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="-" ref_id="SGN-U579118" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1851</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U579118" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33639" e_stop="33472"/>
          <exon e_start="32225" e_stop="31858"/>
          <exon e_start="31347" e_stop="31120"/>
          <exon e_start="31030" e_stop="30676"/>
          <exon e_start="30565" e_stop="30441"/>
          <exon e_start="30306" e_stop="30171"/>
          <exon e_start="29396" e_stop="28926"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCTCCATCTCTGTTAACTGGTGACGCTTACACATAAATCCGTCAGATCCGCCCCTTCTCTCCCTCTCCTCTCTCTCATGGTCAAAACCCTACAAATAGAAGCATAGCTCGACGGAGAAATCGAGCGAATAACAGTCCACGGACATCTCCAGATCGTCGCTACCTCTGTGAGTGTCTCCGATCTCTTCTGCATGTATTTTTCTCATTTAGAGAATTGATTTTCTTTCTTTATGGAAAAAAAAATTAGATCATCTATGTACCGGAAGAAGAGATCTATAGATCGAGAAATCGGTGTGAAAATGAAATTATTTTTTGTCGAGCTGAGATCTGAATCAGTCCATAGATCTGATGAGTTTATTTAGCTCAAGATCTGTTATATGTTTGAGTTGATTATATATGTATGTCTTTGTTTATATGCATGTATGTGTAGATATATGAATTTTGTAGAGTACGAAATTCTGGAAGTTTTTTTTTTGGCTGTTAAATTCTGATTTGTAATGTGATGGTAAAAGGATCTAGATCTGAAAAGTATGCTTGTGTATCTGCGTTCTGTTTTCATGATATCTGGATAACGATATGGCTTGATAGACAGTGTGAGTAAATTGATTTATTATTTATGTGACATGTGATGGTCACTAATCGACCATGAAATACAAAAATATTTGAAGTGGTACATGAACAACAGAGTTGAGATGTTTTTGTATCTGTATGGACAGTTTGGTCTTGTTGCAAGCATTGAAGAAGTACTATTTACTTGGAATGCATGAATGGTTCTTAGATTTGAATCTCCAAATTTTGTTTTCATAATGACATAAGAAAATTTTAAACTTGATATAAGTATGGATCTTTACAATAAAAGAAGTCTTCTCTGATTAAATTATGTCGAACCTGTATTAGTATATGTAATCCCCCAAGAGAATTGTTGCAAGGATATAATATTAATTGTATATTTTAGTGGATTTGTCCTATTATTAGCAGGATTCATTGATAGATATATGTGATATCCATGTTTTAGTCCTTGGAATTGGTGGTTGGGGGTGGAGAAGAAGAAATAATCTCATTTTGTCTTCTTATAAAGAAAGAAACTTCCTCAATTTGATTATCCTTATCAGCTCAATTTATATGCTTAGGTATATTCCTGTTTTTGTGTTCCAAGCATATCCTATGTGCTCTCCATTAATATATATGCTTCACTGAATCTGAATTTGTGATAACACCTTCCATTGATTGAAAATTTGCTTTAAATTGTATCTTGAGAATGTTAATACTGATATTATATCATCTGAAATTAATCTTTCTGGCTAGCTATGCACATTAAAATTACACAAGATCATGAGCGTAGTTGAGGCACTATATCTTCCCGGTTATTTGTCTGAATAGTTTTTGTCTTTGTTTTTTTTATGGTTTGAACAGAGATAGTTCTGTTAATAGTGAACAATGGGAGGAGGATTCAGAGTGCTGCACCTTGTGAAACCATTTCTTTCTTTTCTACCTGAAGTTCAGAGTGCTGACAGGAAGGTTCAATTCAAAGAGAAGGTCATCTATACTGTAATTGCGCTTGCTATTTTTCTGGTTTGCAGTCAGCTCCCTCTTTATGGCATACACTCTACAACTGGCGCGGATCCTTTTTACTGGATGCGTGTCATTCTTGCCTCAAACCGTGGTACAGTCATGGAACTTGGAATTACTCCAATTGTGACTTCTGGAATGGTGATGCAATTGTTAGCTGGATCAAAAATCATTCAAGTGGACAACAATGTTCGGGAGGACCGAGCACTCCTGTAAGTTTGTTTTTAAGATTTTTATTTCTTTAGTTGTTTAACAACATATGTATATTGCATCAGTTCTATTTTGTTAGTTGTCTATTGTTTAAATTCCATATGCAGTGGTAATAGTATGGTTTGGAACCTTCAGAAAAGGATATTGTTTGGAACTTATGGGGATGATATGATCTATAACTTTAATGCTGAAATCATTTTGCAGAACCTAGATTAGTTGTATAATTTGGATTTTCAAGGCAAATTTCATTTTTCAGATTTTCTCACCCTTGAACTTTTACTGAACATTCATGCCGTCATTTGATCCTGGTATGTAGACCTAGATTACTCTGTGCACCCCCTGCCCTGCCCACACACCCACATCCCCAAAGATTTAGATGCATCTTTTTGTACTTGTTACTCAGTTACCTAAAAAAATTCTTTCATGCTGTTAAGTAGATTTTTTGATGTTTCTTTATCTTTTCTGGTCAATGAAGCTCTCTCCTGTGCTCTCTAACAATTTATCCCATGCAGTAATGGTGCTCAAAAGCTATTGGGTATCCTGATTGCTGTCGGTGAGGCAGTTGCTTATGTCCTGTCGGGGATGTATGGCAGTGTTAGCCAATTGGGTGTTGGAAATGCTATCCTCATTATCCTCCAACTCTGCTTTGCTGCTATCATTGTCATGTGCTTAGATGAACTTCTTCAGAAAGGATATGGTCTTGGCTCTGGAATTTCCTTGTTCATAGCTACCAATATCTGGTATGTTTTTACTGTCTATCGGAAAAACCTATTTTGAGTTTGTCAGTACATTCATAGAGCTTATAATTCCAAGTTAATTATATTTTCAGTGAAAGCATTATCTGGAAAGCATTTAGTCCCACAACCATCAATACCGGGCGTGGTGCTGAATTTGAAGGAGCTATAATTGCTCTGTTCCATCTTACTATTACTAGATCTAATAGGATTAGTGCCTTGCGTGAGGCTTTCTACCGGCAAAGTCTCCCCAATGTGACAAATCTGCTTGCAACTGTGTTGATCTTCCTCATCGTTATCTACTTCCAAGGATTCCGTGTAGTTTTACCTGTTAGATCTAAGAATGCTCGTGGACAGCAAGGTTCTTACCCAATTAAACTCTTCTACACCTCAAACATGCCTATTATTTTGCAGTCCGCACTTGTCTCAAACCTGTATTTCATCTCTCAGGTACCTAATTGCTAAGTTTTTTTTCGGTTGATTGCCAACTTGCTGTCACCTGTTCCAAGAGTGTAACAATTTCTATTTCTTTTTGCCCTTTTGCTGTCCTCTATTATCAGTTGCTCTACAGGAGATATGGAGGAAATTTCATCGTGGATATGATAGGAACTTGGAAAGAATCTGAATATTCTGGACAATCTGTTCCTGTTGCTGGTCTTGCTTACCTTGTCACTGCGCCATCAAGGTATTGTTCCCCTTTTCTTCAGCTAATCAATCTCTATTTTGTGTAGAAGTTCTTCACAAGTCTGTTCAGCCTCATATCTTGTGCTTCTTACTTCTGTAAATGCCATTGACGGTCAACTCTTTAATGTATTTCAGCTTGGCAGAAATGGTGTCGCATCCGTTCCATGCTCTTTTCTATATAGTGTTCATGTTATCAGCCTGTGCCCTGTTCTCAAAGACCTGGATTGAAGTTTCTGGATCGTCTGCCAGAGATGTTGCCAAACAGCTCAAGGTAAATGATCTTGTTGCCTTTGTTTTGTGAACTTTTCCCCGTTCTATTTGTTTGTCCCAAAGTGATTTGTCAGTAAAATTAACTGAAACTTAACTTCGTTACTTTTAGTGGTTGTGCTGCTGTGTTATGGATGGCAATCAGAATGAGAACTTCTTCAGTGGGGTTCTAACTATCCCCCATGCTGTAGATTATGAGAAGAAATAATTGCTATAGATTATTATTGAATGACTTATCAAGATCTCGTTATTTCTAGTCAAAACAGGTTAAAAGAGACAACATCATTCTTCTTCCCATTACCCATAATATACTATTGCCGTTTTGTAACATCTGACAGTAGTATCCCACATCTCTGAATTTTGAATCACAGTAAAACATTGGTTTGGCCTCTGAAAGGAATACGTTGGTTCTTGGAGCTTGATTGCCTCACATAGCCCACAAGTTATGAGACAGTATCATGGTGGATTGCTCATAACATACTATTGAAGTTCTTTAATATCTGACAGTAATATCCCACATTTCTGAATTCTGAATCACGGTAGACCATTGGTTACTTTTGCTATGTAACGAATATGTATGTTCTTGGAGCTTGTTTGCCTCACACAACCCATAGTTAATGAGACAGTATCATGATGGTTTTGGTACAATTTAGGGTTTGCGTAATCCAGAATCACTTGTTTTTTTGTCATTAAAAGTTATCTTCTCGATATTCTATAGAATGATATGGCTCCCAAGAGTATTATCGGTATGACACTTTTAACAATGATTGATTTGCAGGAGCAACAAATGGTGATGCCTGGTCATCGTGATTCCAACCTGCAGAAGGAACTAAATCGTTACATACCTACTGCAGCTGCCTTTGGAGGAGTTTGCATTGGTGCATTGACAGTTTTGGCAGACTTGATGGGAGCGATTGGATCAGGAACTGGAATCCTTCTTGCAGTCACAATCATTTACCAGTATTTTGAGACATTCGAGAAGGAGAAGGCCACTGAACTAGGCATGTTTGGTTTGTAGGCTGTAGCGTTTATGCTAGAATGTCCCTCCAAGCCAAGAGAGCAATGTAGTGAACTTGTTGGCTTATAATGGATAGATATTAGAGGCCACAAGTTTTTCCTGTTAAATTTTGTAAGTTTTTTTTTTTGTTTTTAACTGTGCTGATGAGCGCCCGAATGTTTTACATGAAAAGACTAGGTTAATTTACAGAAATTCTCAAAGGATATTTTACATGATACAAGCATCGAGCAC</genome_strand>
        <mrna_strand>GTTCTCCATCTCTGTTAACTGGTGACGCTTACACATAAATCCGTCAGATCCGCCCCTTCTCTCCCTCTCCTCTCTCTCATGGTCAAAACCCTACAAATAGAAGCATAGCTCGACGGAGAAATCGAGCGAATAACAGTCCACGGACATCTCCAGATCGTCGCTACCTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATAGTTCTGTTAATAGTGAACAATGGGAGGAGGATTCAGAGTGCTGCACCTTGTGAAACCATTTCTTTCTTTTCTACCTGAAGTTCAGAGTGCTGACAGGAAGGTTCAATTCAAAGAGAAGGTCATCTATACTGTAATTGCGCTTGCTATTTTTCTGGTTTGCAGTCAGCTCCCTCTTTATGGCATACACTCTACAACTGGCGCGGATCCTTTTTACTGGATGCGTGTCATTCTTGCCTCAAACCGTGGTACAGTCATGGAACTTGGAATTACTCCAATTGTGACTTCTGGAATGGTGATGCAATTGTTAGCTGGATCAAAAATCATTCAAGTGGACAACAATGTTCGGGAGGACCGAGCACTCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGGTGCTCAAAAGCTATTGGGTATCCTGATTGCTGTCGGTGAGGCAGTTGCTTATGTCCTGTCGGGGATGTATGGCAGTGTTAGCCAATTGGGTGTTGGAAATGCTATCCTCATTATCCTCCAACTCTGCTTTGCTGCTATCATTGTCATGTGCTTAGATGAACTTCTTCAGAAAGGATATGGTCTTGGCTCTGGAATTTCCTTGTTCATAGCTACCAATATCTG.........................................................................................TGAAAGCATTATCTGGAAAGCATTTAGTCCCACAACCATCAATACCGGGCGTGGTGCTGAATTTGAAGGAGCTATAATTGCTCTGTTCCATCTTACTATTACTAGATCTAATAGGATTAGTGCCTTGCGTGAGGCTTTCTACCGGCAAAGTCTCCCCAATGTGACAAATCTGCTTGCAACTGTGTTGATCTTCCTCATCGTTATCTACTTCCAAGGATTCCGTGTAGTTTTACCTGTTAGATCTAAGAATGCTCGTGGACAGCAAGGTTCTTACCCAATTAAACTCTTCTACACCTCAAACATGCCTATTATTTTGCAGTCCGCACTTGTCTCAAACCTGTATTTCATCTCTCAG..............................................................................................................TTGCTCTACAGGAGATATGGAGGAAATTTCATCGTGGATATGATAGGAACTTGGAAAGAATCTGAATATTCTGGACAATCTGTTCCTGTTGCTGGTCTTGCTTACCTTGTCACTGCGCCATCAAG......................................................................................................................................CTTGGCAGAAATGGTGTCGCATCCGTTCCATGCTCTTTTCTATATAGTGTTCATGTTATCAGCCTGTGCCCTGTTCTCAAAGACCTGGATTGAAGTTTCTGGATCGTCTGCCAGAGATGTTGCCAAACAGCTCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAACAAATGGTGATGCCTGGTCATCGTGATTCCAACCTGCAGAAGGAACTAAATCGTTACATACCTACTGCAGCTGCCTTTGGAGGAGTTTGCATTGGTGCATTGACAGTTTTGGCAGACTTGATGGGAGCGATTGGATCAGGAACTGGAATCCTTCTTGCAGTCACAATCATTTACCAGTATTTTGAGACATTCGAGAAGGAGAAGGCCACTGAACTAGGCATGTTTGGTTTGTAGGCTGTAGCGTTTATGCTAGAATGTCCCTCCAAGCCAAGAGAGCAATGTAGTGAACTTGTTGGCTTATAATGGATAGATATTAGAGGCCACAAGTTTTTCCTGTTAAATTTTGTAAGTTTTTTTTTTTGTTTTTAACTGTGCTGATGAGCGCCCGAATGTTTTACATGAAAAGACTAGGTTAATTTACAGAAATTCTCAAAGGATATTTTACATGATACAAGCATCGGGCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U593629" ref_strand="+" ref_description="SGN-U593629 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|148906342|gb|ABR16326.1| (e_value=2e-44) unknown; (*ATH) AT2G34250.1 (e_value=1e-46) | Symbol: None | protein transport protein sec61, putative, similar to PfSec61 (Plasmodium falciparum) GI:3057044; contains Pfam profile PF00344: eubacterial secY protein | chr2:14469168-14471941 FORWARD | Aliases: F13P17.9, F13P17_9; (*SWP) sp|Q9H9S3|S61A2_HUMAN (e_value=9e-39) Protein transport protein Sec61 subunit alpha isoform 2 OS=Homo sapiens GN=SEC61A2; ">
      <seq>gaatttccttgttcatatctaccaatatctgggaaagcattatttggggagcatttaggcccacaaccatcaataccgggcgtggtgctgaattacaaggagctataattgctctgtaccatcttactattactagaactaataggataagtgccttgcgtgaggctttataccggcaaagtctccccaatgtgacaaatctgcttgcaactgagatgatcttcctcatcgttatctacttccaaggattccgagtatgtacacctgacagatctaaaaatgctcggggacagcatggttcttacccaatcagactgttctacacctaacacatgcctattattttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="-" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="31450" stop="30415"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31150" g_stop="31120" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="0.968"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31119" i_stop="31031" i_length="89">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="0.966" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31030" g_stop="30715" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="347" r_length="316" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="-" ref_id="SGN-U593629" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U593629" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31150" e_stop="31120"/>
          <exon e_start="31030" e_stop="30715"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTTCCTTGTTCATAGCTACCAATATCTGGTATGTTTTTACTGTCTATCGGAAAAACCTATTTTGAGTTTGTCAGTACATTCATAGAGCTTATAATTCCAAGTTAATTATATTTTCAGTGAAAGCATTATCTGGAAAGCATTTAGTCCCACAACCATCAATACCGGGCGTGGTGCTGAATTTGAAGGAGCTATAATTGCTCTGTTCCATCTTACTATTACTAGATCTAATAGGATTAGTGCCTTGCGTGAGGCTTTCTACCGGCAAAGTCTCCCCAATGTGACAAATCTGCTTGCAACTGTGTTGATCTTCCTCATCGTTATCTACTTCCAAGGATTCCGTGTAGTTTTACCTGTTAGATCTAAGAATGCTCGTGGACAGCAAGGTTCTTACCCAATTAAACTCTTCTACACCTCAAACATGCCTATTATTTTG</genome_strand>
        <mrna_strand>GAATTTCCTTGTTCATATCTACCAATATCTG.........................................................................................GGAAAGCATTATTTGGGGAGCATTTAGGCCCACAACCATCAATACCGGGCGTGGTGCTGAATTACAAGGAGCTATAATTGCTCTGTACCATCTTACTATTACTAGAACTAATAGGATAAGTGCCTTGCGTGAGGCTTTATACCGGCAAAGTCTCCCCAATGTGACAAATCTGCTTGCAACTGAGATGATCTTCCTCATCGTTATCTACTTCCAAGGATTCCGAGTATGTACACCTGACAGATCTAAAAATGCTCGGGGACAGCATGGTTCTTACCCAATCAGACTGTTCTACACCTAACACATGCCTATTATTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591577" ref_strand="+" ref_description="SGN-U591577 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157338378|emb|CAO39422.1| (e_value=7e-119) unnamed; (*ATH) AT1G78720.1 (e_value=3e-118)  Symbol: None | protein transport protein sec61, putative, similar to SP:P38377 Protein transport protein Sec61 alpha subunit isoform 1 (Sec61 alpha- 1) {Canis familiaris}; contains Pfam profile PF00344: eubacterial secY protein | chr1:29610522-29612... ; (*SWP) sp|P38379|SC61A_PYRSA (e_value=5e-93) Protein transport protein Sec61 subunit alpha OS=Pyrenomonas salina; ">
      <seq>tttttctggtttgcagtcagctccctctttatggcatacactctacaactggcgcggatcctttttactggatgcgtgtcattcttgcctcaaaccgtggtacagtcatggaacttggaattactccaattgtgacttctggaatggtgatgcaattgttagctggatcaaaaatcattcaagtggacaacaatgttcgggaggaccgagcactccttaatggtgctcaaaagctattgggtatcctgattgctgtcggtgaggcagttgcttatgtcctgtcggggatgtatggcagtgttagccaattgggtgttggaaatgctatcctcattatcctccaactctgctttgctgctatcattgtcatgtgcttagatgaacttcttcagaaaggatatggtcttggctctggaaagcatttagtcccacaaccatcaataccgggcgtggtgctgaatttgaaggagctataattgctctgttccatcttactattactagatctaataggattagtgccttgcgtgaggctttctaccggcaaagtctccccaatgtgacaaatctgcttgcaactgtgttgatcttcctcatcgttatctacttccaaggattccgtgtagttttacctgttagatctaagaatgctcgtggacagcaaggttcttaccccattaaactcttctacacctcaaacatgcctattatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="-" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="32374" stop="30416"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32074" g_stop="31858" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31857" i_stop="31348" i_length="510">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31347" g_stop="31149" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="416" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31148" i_stop="31014" i_length="135">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31013" g_stop="30716" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="714" r_length="298" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="-" ref_id="SGN-U591577" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U591577" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32074" e_stop="31858"/>
          <exon e_start="31347" e_stop="31149"/>
          <exon e_start="31013" e_stop="30716"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCTGGTTTGCAGTCAGCTCCCTCTTTATGGCATACACTCTACAACTGGCGCGGATCCTTTTTACTGGATGCGTGTCATTCTTGCCTCAAACCGTGGTACAGTCATGGAACTTGGAATTACTCCAATTGTGACTTCTGGAATGGTGATGCAATTGTTAGCTGGATCAAAAATCATTCAAGTGGACAACAATGTTCGGGAGGACCGAGCACTCCTGTAAGTTTGTTTTTAAGATTTTTATTTCTTTAGTTGTTTAACAACATATGTATATTGCATCAGTTCTATTTTGTTAGTTGTCTATTGTTTAAATTCCATATGCAGTGGTAATAGTATGGTTTGGAACCTTCAGAAAAGGATATTGTTTGGAACTTATGGGGATGATATGATCTATAACTTTAATGCTGAAATCATTTTGCAGAACCTAGATTAGTTGTATAATTTGGATTTTCAAGGCAAATTTCATTTTTCAGATTTTCTCACCCTTGAACTTTTACTGAACATTCATGCCGTCATTTGATCCTGGTATGTAGACCTAGATTACTCTGTGCACCCCCTGCCCTGCCCACACACCCACATCCCCAAAGATTTAGATGCATCTTTTTGTACTTGTTACTCAGTTACCTAAAAAAATTCTTTCATGCTGTTAAGTAGATTTTTTGATGTTTCTTTATCTTTTCTGGTCAATGAAGCTCTCTCCTGTGCTCTCTAACAATTTATCCCATGCAGTAATGGTGCTCAAAAGCTATTGGGTATCCTGATTGCTGTCGGTGAGGCAGTTGCTTATGTCCTGTCGGGGATGTATGGCAGTGTTAGCCAATTGGGTGTTGGAAATGCTATCCTCATTATCCTCCAACTCTGCTTTGCTGCTATCATTGTCATGTGCTTAGATGAACTTCTTCAGAAAGGATATGGTCTTGGCTCTGGAATTTCCTTGTTCATAGCTACCAATATCTGGTATGTTTTTACTGTCTATCGGAAAAACCTATTTTGAGTTTGTCAGTACATTCATAGAGCTTATAATTCCAAGTTAATTATATTTTCAGTGAAAGCATTATCTGGAAAGCATTTAGTCCCACAACCATCAATACCGGGCGTGGTGCTGAATTTGAAGGAGCTATAATTGCTCTGTTCCATCTTACTATTACTAGATCTAATAGGATTAGTGCCTTGCGTGAGGCTTTCTACCGGCAAAGTCTCCCCAATGTGACAAATCTGCTTGCAACTGTGTTGATCTTCCTCATCGTTATCTACTTCCAAGGATTCCGTGTAGTTTTACCTGTTAGATCTAAGAATGCTCGTGGACAGCAAGGTTCTTACCCAATTAAACTCTTCTACACCTCAAACATGCCTATTATTTT</genome_strand>
        <mrna_strand>TTTTTCTGGTTTGCAGTCAGCTCCCTCTTTATGGCATACACTCTACAACTGGCGCGGATCCTTTTTACTGGATGCGTGTCATTCTTGCCTCAAACCGTGGTACAGTCATGGAACTTGGAATTACTCCAATTGTGACTTCTGGAATGGTGATGCAATTGTTAGCTGGATCAAAAATCATTCAAGTGGACAACAATGTTCGGGAGGACCGAGCACTCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGGTGCTCAAAAGCTATTGGGTATCCTGATTGCTGTCGGTGAGGCAGTTGCTTATGTCCTGTCGGGGATGTATGGCAGTGTTAGCCAATTGGGTGTTGGAAATGCTATCCTCATTATCCTCCAACTCTGCTTTGCTGCTATCATTGTCATGTGCTTAGATGAACTTCTTCAGAAAGGATATGGTCTTGGCTCTGGA.......................................................................................................................................AAGCATTTAGTCCCACAACCATCAATACCGGGCGTGGTGCTGAATTTGAAGGAGCTATAATTGCTCTGTTCCATCTTACTATTACTAGATCTAATAGGATTAGTGCCTTGCGTGAGGCTTTCTACCGGCAAAGTCTCCCCAATGTGACAAATCTGCTTGCAACTGTGTTGATCTTCCTCATCGTTATCTACTTCCAAGGATTCCGTGTAGTTTTACCTGTTAGATCTAAGAATGCTCGTGGACAGCAAGGTTCTTACCCCATTAAACTCTTCTACACCTCAAACATGCCTATTATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U592024" ref_strand="+" ref_description="SGN-U592024 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|21593089|gb|AAM65038.1| (e_value=4e-107) putative protein transport protein SEC61 alpha subunit [Arabidopsis thaliana]; (*ATH) AT2G34250.1 (e_value=9e-110) | Symbol: None | protein transport protein sec61, putative, similar to PfSec61 (Plasmodium falciparum) GI:3057044; contains Pfam profile PF00344: eubacterial secY protein | chr2:14469168-14471941 FORWARD | Aliases: F13P17.9, F13P17_9; (*SWP) sp|Q54XK2|SC61A_DICDI (e_value=3e-84) Protein transport protein Sec61 subunit alpha OS=Dictyostelium discoideum GN=sec61a; ">
      <seq>cacgaggtctctcatggtcaaaaccctacaaatagaagcatagctcgacggagaaatcgagcgaataacagtccacggacatctccagatcgtcgctacctctagatagttctgttaatagtgaacaatgggaggaggattcagagtgctgcaccttgtgaaaccatttctttcttttctacctgaagttcagagtgctgacaggaaggttcaattcaaagagaaggtcatctatactgtaattgcgcttgctatttttctggtttgcagtcagctccctctttatggcatacactctacaactggcgcggatcctttttactggatgcgtgtcattcttgcctcaaaccgtggtacagtcatggaacttggaattactccaattgtgacttctggaatggtgatgcaattgttagctggatcaaaaatcattcaagtggacaacaatgttcgggaggaccgagcactccttaatggtgctcaaaagctattgggtatcctgattgctgtcggtgaggcagttgctgctatcattgtcatgtgcttagatgaacttcttcagaaaggatatggtcttggctctggaatttccttgttcatagctaccaatatctgtgaaagcattatctggaaagcatttagtcccacaaccatcaataccgggcgtggtgctgaatttgaaggagctataattgctctgttccatcttactattactagatctaataggattagtgccttgcgtgaggctttctaccggcaaagtctccccaatgtgacaaatctgctttgcactgtgttgatcttcctcatcgttatctacttccaaggatttccgtgtagttttacctgttagatcctagaatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="-" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="33867" stop="30478"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33575" g_stop="33472" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="0.942"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33471" i_stop="32226" i_length="1246">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32225" g_stop="31858" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="471" r_length="368" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31857" i_stop="31348" i_length="510">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31347" g_stop="31296" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="523" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31295" i_stop="31212" i_length="84">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31211" g_stop="31120" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="524" r_stop="615" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31119" i_stop="31031" i_length="89">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31030" g_stop="30778" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="616" r_stop="869" r_length="254" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="-" ref_id="SGN-U592024" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>869</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U592024" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33575" e_stop="33472"/>
          <exon e_start="32225" e_stop="31858"/>
          <exon e_start="31347" e_stop="31296"/>
          <exon e_start="31211" e_stop="31120"/>
          <exon e_start="31030" e_stop="30778"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCCTCTCTCTCATGGTCAAAACCCTACAAATAGAAGCATAGCTCGACGGAGAAATCGAGCGAATAACAGTCCACGGACATCTCCAGATCGTCGCTACCTCTGTGAGTGTCTCCGATCTCTTCTGCATGTATTTTTCTCATTTAGAGAATTGATTTTCTTTCTTTATGGAAAAAAAAATTAGATCATCTATGTACCGGAAGAAGAGATCTATAGATCGAGAAATCGGTGTGAAAATGAAATTATTTTTTGTCGAGCTGAGATCTGAATCAGTCCATAGATCTGATGAGTTTATTTAGCTCAAGATCTGTTATATGTTTGAGTTGATTATATATGTATGTCTTTGTTTATATGCATGTATGTGTAGATATATGAATTTTGTAGAGTACGAAATTCTGGAAGTTTTTTTTTTGGCTGTTAAATTCTGATTTGTAATGTGATGGTAAAAGGATCTAGATCTGAAAAGTATGCTTGTGTATCTGCGTTCTGTTTTCATGATATCTGGATAACGATATGGCTTGATAGACAGTGTGAGTAAATTGATTTATTATTTATGTGACATGTGATGGTCACTAATCGACCATGAAATACAAAAATATTTGAAGTGGTACATGAACAACAGAGTTGAGATGTTTTTGTATCTGTATGGACAGTTTGGTCTTGTTGCAAGCATTGAAGAAGTACTATTTACTTGGAATGCATGAATGGTTCTTAGATTTGAATCTCCAAATTTTGTTTTCATAATGACATAAGAAAATTTTAAACTTGATATAAGTATGGATCTTTACAATAAAAGAAGTCTTCTCTGATTAAATTATGTCGAACCTGTATTAGTATATGTAATCCCCCAAGAGAATTGTTGCAAGGATATAATATTAATTGTATATTTTAGTGGATTTGTCCTATTATTAGCAGGATTCATTGATAGATATATGTGATATCCATGTTTTAGTCCTTGGAATTGGTGGTTGGGGGTGGAGAAGAAGAAATAATCTCATTTTGTCTTCTTATAAAGAAAGAAACTTCCTCAATTTGATTATCCTTATCAGCTCAATTTATATGCTTAGGTATATTCCTGTTTTTGTGTTCCAAGCATATCCTATGTGCTCTCCATTAATATATATGCTTCACTGAATCTGAATTTGTGATAACACCTTCCATTGATTGAAAATTTGCTTTAAATTGTATCTTGAGAATGTTAATACTGATATTATATCATCTGAAATTAATCTTTCTGGCTAGCTATGCACATTAAAATTACACAAGATCATGAGCGTAGTTGAGGCACTATATCTTCCCGGTTATTTGTCTGAATAGTTTTTGTCTTTGTTTTTTTTATGGTTTGAACAGAGATAGTTCTGTTAATAGTGAACAATGGGAGGAGGATTCAGAGTGCTGCACCTTGTGAAACCATTTCTTTCTTTTCTACCTGAAGTTCAGAGTGCTGACAGGAAGGTTCAATTCAAAGAGAAGGTCATCTATACTGTAATTGCGCTTGCTATTTTTCTGGTTTGCAGTCAGCTCCCTCTTTATGGCATACACTCTACAACTGGCGCGGATCCTTTTTACTGGATGCGTGTCATTCTTGCCTCAAACCGTGGTACAGTCATGGAACTTGGAATTACTCCAATTGTGACTTCTGGAATGGTGATGCAATTGTTAGCTGGATCAAAAATCATTCAAGTGGACAACAATGTTCGGGAGGACCGAGCACTCCTGTAAGTTTGTTTTTAAGATTTTTATTTCTTTAGTTGTTTAACAACATATGTATATTGCATCAGTTCTATTTTGTTAGTTGTCTATTGTTTAAATTCCATATGCAGTGGTAATAGTATGGTTTGGAACCTTCAGAAAAGGATATTGTTTGGAACTTATGGGGATGATATGATCTATAACTTTAATGCTGAAATCATTTTGCAGAACCTAGATTAGTTGTATAATTTGGATTTTCAAGGCAAATTTCATTTTTCAGATTTTCTCACCCTTGAACTTTTACTGAACATTCATGCCGTCATTTGATCCTGGTATGTAGACCTAGATTACTCTGTGCACCCCCTGCCCTGCCCACACACCCACATCCCCAAAGATTTAGATGCATCTTTTTGTACTTGTTACTCAGTTACCTAAAAAAATTCTTTCATGCTGTTAAGTAGATTTTTTGATGTTTCTTTATCTTTTCTGGTCAATGAAGCTCTCTCCTGTGCTCTCTAACAATTTATCCCATGCAGTAATGGTGCTCAAAAGCTATTGGGTATCCTGATTGCTGTCGGTGAGGCAGTTGCTTATGTCCTGTCGGGGATGTATGGCAGTGTTAGCCAATTGGGTGTTGGAAATGCTATCCTCATTATCCTCCAACTCTGCTTTGCTGCTATCATTGTCATGTGCTTAGATGAACTTCTTCAGAAAGGATATGGTCTTGGCTCTGGAATTTCCTTGTTCATAGCTACCAATATCTGGTATGTTTTTACTGTCTATCGGAAAAACCTATTTTGAGTTTGTCAGTACATTCATAGAGCTTATAATTCCAAGTTAATTATATTTTCAGTGAAAGCATTATCTGGAAAGCATTTAGTCCCACAACCATCAATACCGGGCGTGGTGCTGAATTTGAAGGAGCTATAATTGCTCTGTTCCATCTTACTATTACTAGATCTAATAGGATTAGTGCCTTGCGTGAGGCTTTCTACCGGCAAAGTCTCCCCAATGTGACAAATCTGCTTGCAACTGTGTTGATCTTCCTCATCGTTATCTACTTCCAAGGA-TTCCGTGTAGTTTTACCTGTTAGATCTAAGAATGCT</genome_strand>
        <mrna_strand>CACG-AGGTCTCTCATGGTCAAAACCCTACAAATAGAAGCATAGCTCGACGGAGAAATCGAGCGAATAACAGTCCACGGACATCTCCAGATCGTCGCTACCTCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATAGTTCTGTTAATAGTGAACAATGGGAGGAGGATTCAGAGTGCTGCACCTTGTGAAACCATTTCTTTCTTTTCTACCTGAAGTTCAGAGTGCTGACAGGAAGGTTCAATTCAAAGAGAAGGTCATCTATACTGTAATTGCGCTTGCTATTTTTCTGGTTTGCAGTCAGCTCCCTCTTTATGGCATACACTCTACAACTGGCGCGGATCCTTTTTACTGGATGCGTGTCATTCTTGCCTCAAACCGTGGTACAGTCATGGAACTTGGAATTACTCCAATTGTGACTTCTGGAATGGTGATGCAATTGTTAGCTGGATCAAAAATCATTCAAGTGGACAACAATGTTCGGGAGGACCGAGCACTCCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGGTGCTCAAAAGCTATTGGGTATCCTGATTGCTGTCGGTGAGGCAGTT....................................................................................GCTGCTATCATTGTCATGTGCTTAGATGAACTTCTTCAGAAAGGATATGGTCTTGGCTCTGGAATTTCCTTGTTCATAGCTACCAATATCTG.........................................................................................TGAAAGCATTATCTGGAAAGCATTTAGTCCCACAACCATCAATACCGGGCGTGGTGCTGAATTTGAAGGAGCTATAATTGCTCTGTTCCATCTTACTATTACTAGATCTAATAGGATTAGTGCCTTGCGTGAGGCTTTCTACCGGCAAAGTCTCCCCAATGTGACAAATCTGCTTTGCACTGTGTTGATCTTCCTCATCGTTATCTACTTCCAAGGATTTCCGTGTAGTTTTACCTGTTAGATCCTAGAATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U603805" ref_strand="+" ref_description="SGN-U603805 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157354699|emb|CAO48017.1| (e_value=2e-78) unnamed; (*ATH) AT1G29330.1 (e_value=2e-75) | Symbol: None | ER lumen protein retaining receptor (ERD2) / HDEL receptor, identical to SP:P35402 ER lumen protein retaining receptor (HDEL receptor) {Arabidopsis thaliana} | chr1:10257986-10261056 REVERSE | Aliases: F28N24.1; (*SWP) sp|P35402|ERD2_ARATH (e_value=2e-74) ER lumen protein retaining receptor OS=Arabidopsis thaliana GN=ERD2; ">
      <seq>ggtttctacccgcaatccccaacccggcaaacccctaatcttcatcattttcttcaggatttgactctaatcgtgaacaatctagggctggaatagagcggttttcgcagtagtaatcatgaatatcttcagactggccggagacatgacacatttgattagtgtcttagttctcctcctgaaaatctatgctaccaaatcatgctcaggaatatcattgaagacgcaagagttatatgctattgtgtttgtggctcggtatctggatttgttcacagacttcatctctctttacaacactgtgatgaaactggtttttattgggagctccttggccattgtctggtgtatgaggtaccatcgagttgttaggcgctcatatgaccgtgagctagacacttttcgctattggattcttctgggggcgtgttttgttttggcacttgttcttcatgagaagtttacccttcaagaggtgttctgggctttctccatatacctacaggcagttgccattcttccccaattggtgctcttgccaagaactggaaatgttgataatctgactggacaatatgcgttctttcttggggcctaccgtgcattttacatcttaaactgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="+" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="35787" stop="43111"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36086" g_stop="36294" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="209" r_length="209" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36295" i_stop="37310" i_length="1016">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.805" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37311" g_stop="37576" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="475" r_length="266" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37577" i_stop="39242" i_length="1666">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39243" g_stop="39358" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="591" r_length="116" r_score="0.957"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39359" i_stop="42780" i_length="3422">
            <donor d_prob="0.900" d_score="0.96"/>
            <acceptor a_prob="0.982" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42781" g_stop="42811" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="592" r_stop="622" r_length="31" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="+" ref_id="SGN-U603805" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U603805" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36086" e_stop="36294"/>
          <exon e_start="37311" e_stop="37576"/>
          <exon e_start="39243" e_stop="39358"/>
          <exon e_start="42781" e_stop="42811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTTTCTACCCGCAATCCCCAACCCGGCAAACCCCTAATCTTCATCATTTTCTTCAGGATTTGACTCTAATCGTGAACAATCTAGGGCTGGAATAGAGCGGTTTTCGCAGTAGTAATCATGAATATCTTCAGACTGGCCGGAGACATGACACATTTGATTAGTGTCTTAGTTCTCCTCCTGAAAATCTATGCTACCAAATCATGCTCAGGTTCTTATTTCAACTTGCATTTTCATTCAGTTCCTTGATCAGCTATTGTATATATTTTGTATCATGTAAATAGTTTTGCATCAGAAGGTGAAACAGCGAAACCTTAAGGTACTGTTTTATATTAACTTTGTCGACTTTATTGGTGTTGAAACCTGAATGAGCAGTTTTGCTTCATACATGAATGACCGTATCTGATTGGCTCTTAAAATTGCGAGTTATGTTTTTGATTTTGTATTCATTGGAATTGAATTATGCAATGATGTGTTTGAATGGGTTTCCATTAAGCAGTTCATTGAGTGAAAAAATTAATGCTCATTTGATGAATTAAGAGTGAGTGTTAGTCCATTTATGTGCTAGTTAGTGATTCGTGCAATGGACATGATACATTATTTATAGGGAAGTAGTTACATTACAACTCCTGAAACTAATAGGACTTGGACGATATTAGACCTGCTGAGAGATTGCAATGAGTGAGCATTCTTTTTGATTTTACTGAGGAAATCTGTGAATATAATGTTTTGAAACTTCTTTGAGCCCAGGAACTTTTACTAGGTTATCTTCTTGCTACGTATTAAGTAGATATTTGGATTCATGTAGGACATATAGTGAAATCAGTGGCACTGTGAGTAATTTGATAATATGAGAAGACAGTGTTAACATGTTCGATTGTATGGGATGTTGTCAATAAAGGTAAATCAACAACCAGTTGAAGTATGGCATGTTAGGACCTACTACAAATAAGGATAGTCATCGCACATTGGTATTAGTATTGATGTGACAGGTAATTTAACAGATCACTAGATGGTATAAAATATCATTGTCTATTATTGCCCCCTCCTCCCCCAAAAAAAATACGAAAAGAACCGGAAAAGAATGGAAGATGACCTTTTCTTGTAACACAAAAATAAACATTTGGACTTGTTGCATTTTCCGGTAGCTTGAAGTATACTTATGGTGAAATCTGGCTGACATGTAGCTGGAAAATTGTTGGCATTGAGAGTCTTTGCTGTATTCAGGAATATCATTGAAGACGCAAGAGTTATATGCTATTGTGTTTGTGGCTCGGTATCTGGATTTGTTCACAGACTTCATCTCTCTTTACAACACTGTGATGAAACTGGTTTTTATTGGGAGCTCCTTGGCCATTGTCTGGTGTATGAGGTACCATCGAGTTGTTAGGCGCTCATATGACCGTGAGCTAGACACTTTTCGCTATTGGATTCTTCTGGGGGCGTGTTTTGTTTTGGCACTTGTTCTTCATGAGAAGTTTACCCTTCAAGAGGTTAGTGATTTCTAAGTGTTCTAAATATTTCATGTGGAATTGTCCTAGCATTGATAATCATGTTTTTTGTCACTTAATTTGTAATGTTGGTGGTGACTTGTGTGAAGCTGATCTTGGCAAGCACAACATCCTGTTGGTGCTTGCAACAACCATATTTTCAGAATTTCAATAGGCTGGCTACTGTGAAATAGTGAATTTCATTTCTAGAATGTTGTGTAGCTTTGATTCCATGAATAGTGAACTTGAATACAACAACCATGTCTTATCCTAAGGTAGTTTTGGTTGGCTATATGATTTAATCTCATCTCAAACACCCGTATGCTGATGTAATGCATGCTAAGTGGATATATTTCAACAATATATTCTCCGTTATGAAATCAATTGCAAATTGACTAGTTTTATGCTGGCTTACTGCCTTTGCAACTCTCCTATTTTATTCGGATGTGGAACCAACAGCATGAACATTCTCGCAAAATCAGCTCATCAAACACTGTAAAATGTTTGTTTGCTTATTATTCACATGCTCTTCTGGATGTACATGGTTATAGCAACCCTTGAGGTAGTGCTTGTACAGACCTTCTTAAGGTGATCCGTTTTTTGGTGGCCTCTGTTCATGACAAGCTTTGAAAGATTTTACACTGGCCGAGGTGTTCCCATGATAAGATATAAACCCTTAACATTGACAATATACAATCAGCAGCTCGTAATATGTTAAGATGATATGCTTCCAGTCATGTGAATTGATAGACCTTTGTTAACTGATCAGCCCGTTAACATCAGTCTACCCCCTTCAAGAATAATTTCTGTCATAACCGTTTATATTAGTTGTTTCTTAAGTGCCTTTTCTATTGAAATGTTGTTATATTGATTTATCCAGATCGAGGGCCGACAAAATTGCGACTGAAGTTTGATCTTGTCTATTTTATATTTGACTCAGGCTGCTTTCCCCTATTAAAGTCAGCTGAACCCCCTAAAACTTTTTTTTTTCCACTGCGCTATTCTTATCCTCTGTATCCTTACTGCGGTCATTGCAACTCTCCAAATGTATGGGCTTGGTTTCTTCTGCAGGTTTTTTACTACTTGGTGTTGTTCCTATTATGCTACATTGCAATTTGCATGAGTAAGGACATCTTCTTGTCTATATCATTTGCAATCATCTTATTTATTCATTCTTGGTTCCCCTACCCTTTTGGTCATCTCCAGATATTGTTTGACCGTCTTCACTGTTAAAATATGAGCTTCATCCATTTCCCCAGTACATTAATAGACAAAAGATAACTGTGATTTTTCTGTAGCCATGGTATCGTTATAGTCAGACCCATCAACTTATATCATTAATGATCGAGTTCTTCTTCTTCCTTTTTTTTTTTTTTTTTGGGTGGGTGGGTGGGTAAGGGACGCGGAGAGGCGTTCTTTTTTTTTTTTTTTTTTTGGGGGGGGGGGGCGTAGGGAAGCGGAGATTGAACCTTACACTTGGTTGCGAGGTGCTCTACTAATAAGCTGCCATTCAATTTTCTGAATGACTGATTAGAATTTCTGCAGAGACCCTGTGGCAGAGATTGTGTTGCTTGTTTCCTTCTCCTTTTGTGGGATAGTCTAGATTCTCGAATTCATATTTGCTCGCTTCCTGTTTACACTGTTGATGCTACATGTAATGTTGTTCCAGGTGTTCTGGGCTTTCTCAATATACCTAGAGGCAGTTGCCATTCTTCCCCAATTGGTGCTCTTGCAAAGAAGTGGAAATGTTGATAATCTGACTGGACAATATGTGTTCTTTCTTGGGTATGCTTCATCTCCTGTAAATCTGGCGACTTCCTAAAAGAACATTGTTTTGCATAATATGTTGAAAATTGTAGAGAATTTGTATTGATTTGTCCGTATCTATTTTTTATAAAAAATCTGAGTTCTATATAACTCACAGCTGAAATTTGAAATTTGAAAATTCATCATTTATTTTTTTCATAAATATTGCAAATTTGCTTTCCAAATAGCAATAGAGTGCTGGTATTTTACGTAAAACTAGAAAAGGCTTGTCTCAGTTTTAACTGTGAAGGAGTTAATGAAGTTCGTTCACATATCGTATCATTTACAAATTATTGTAAACATTTAAACTTGAAACTATGTGGTACATTTACTCTTCCTCCGAAGCATCGGTTCTCTCTTTCCATAAACCAGACGATGTGTGGTGGAACTGTATTCCATCTTAACTATCTTTCTAGTTTCTGTCTTCCTTTTTTTTTTTTTTTGAGAAGGTAATGACTTGTATTCTATTTTCACAAAAACAGAAACCTGCCACGACAAGTTACTGTCCTTTAAGCATTGAACTTGAAATAGATTTAGGAACATACACTAGATATTCCATGTTACAGTAAAATGCAAAAGAAGATGTCTTGTGTCCTGAGAATCCTTTTCACGTGTAACATTATTGCAAGTAATGAATTTCTTATTCTGCAGGTTATCCTAGTTAGGTTGACTTTTTTCATATCTATAAGACAAAACATGCCGTTCTTGAAGGGCCTTTTTCTTTTCTTAAGCATTTTCTCGCCCCAGTGAGTGATTATTGCTTGGCTTTGTCAATTTACTTGACTGAAAAGTCTTCTGTGCTTCAAAACAGTGAATTAGATCCGGAAGTTGGCCCATCCTTCTCTAACCTCAAAAGAGCCAAGCTCATCTGCGGATCTCGTAGTCCATGGCAATTCTTCCAGAACCTATTGTGCTGGCAATTCTTCTTGAATCTAAGCTTTTGTGTGCATTTTTGTATCAAGTTTTTGTGGCTTCAACAAAATGTGGCAAAGGTCTACCAATATGGGATTACCTCCTTTTGAGAATCCAAACGTAGTATCTTTGCTACCTTCTTATCCTTTTTCCATCACCTACCTTGAGATTCACCCTGGAAGAAAATCATCCCATAAATTTCTTATATTTATTCATGTTGCAAATCCATGAGTTGATATTGGATCAGTTCACCAATACCCACACCTCCAAGCATCTTGTATTTCTTTTACCATCTCATCTACCTTAACATTCTCTTTGACATTGAATTGCTCCCACAAGATACATATAAGTTTCCACTACATAACAATGAGCTGAGATATTGGATTTGTGCAACAAGAGCCATTCACACATACTTTGCCTTTGATGGCATTCTTCAACACTTGCTTGTTCATTACTAACTGCGCAACGTTAATTATAGGGACTTGTATTATCCAGCCTTGGGTTTTTTCAGCTAAACCACTTTCCTTCTTACCAATTACAATAGTCACTGCTGTCTATTTCACAAGTGAACTTTTTCTTTCCTGAGTTACCTCAGAAGTCTCTCCTAATTCTGTCCAACTGCCTCTCCATTTTTGTAGCTTGCCTCTAAAAGGGAAGTCTCATGCATGCTGCTGGAAAAACTCCTCCTCTCTGTCCTAACATATTTCCAAAAATGAGGAATAGATACGCTTTGCCAGATTTATGAAGCCCAGAAACTGCCACAAAACCAAAAGTATACCTCGCGACTCACAGATATCTTAGTCTTCTATCCTTTGTTCCAACAAAAAATTGAGTCAGCATAGAGGAACTCCGAGATAGTGACTGTATTATTCCTTTTTGTGCCCTCTTTGTACCTGTTATCCAACATTTGTACATAGCTCTATACAACATTCCTCAGTTGAACAATCTGAAGAGAAAGAACCGTAGAGGGTGTGCCTGTCACAACCCCCTCTGAAAATTCTCTTCCTGTAGACCCATTTGTCTTCACTGTTCAAAAGCCACAGTATTACATTAATATTATCTCAAGTCCACCAAGAATTCCTAAACTTTAGTACCATACTCAAGCTTTGATTCTTTGTGCTTTGGTTTATGTGGGGAACTCAGAACAGAAAGGGAATGTGGTTCCTCTCTTTGACATTTATCTGTACTGTTCAATGTGTAATTTCCAACCTTTTAGTTTCTGTGCCACCGCATAACTTTTTCATGACATCCCCAATACACGCCCACCAAACATCTGTATACAAAATTCATCCTTCACTTCAATGATCCTTCTTCCACAAAAATTCAACTGCTATTAGAGTCAGTTTTGCTTGTGACTTTGGTGTCAACATACTGTACAATTTTTCAAGGCTTTACTTATGAATAGCTTTTTTCATAGGCTTCGTTGCTAACTCGGTTGGCTGGTTTATTTGGTGAATTTTATTAGTTTCTTATCTACATCAGCCCTTTCATTATTGTGGTTAATTTTCAGAGTGATTGCTGCCGGACAAATCTGCACTATGTATTGAGTTTTAATGACATTCTTCAGTTTTCAAGGATCTTGGGTAGTCATAATTTGATTCCTTACAAAGATTGTGGAATTTCCAATTATTATTAGGCATTAGATTGAGGTACTTTTATTATACTTAACTTGTTGGCACTTAAAATCGTGAGCCTCCTTTGGCAGTCAAAACACTGTCATTTGAGGGCGTTTCTAGAGAACGAACACAAGTGTTATTGCTGCTAGAGGACATGTCTTTTTTTTTTGGCAGCATGTATAACTTTGATGCCATAATTGTCGTGCTCTCCCGATGAAATGGATCTGATCACGCATTGACATTTGTTGGTTTAAAATTTGGTCTTAGCTTTATATGTTTGCTTTGAGCTAACACTCCCTCTGTTGTGATTGCTTGCCATGAGCATCTCCATAATAAGGGAAATTCAATGAATGGTTCCTTTTCTGAGTTGAGTGCCCGTGCTGTGACTTAAAACAAATCTTGTCTATAGCTTGATTGCAGTGAAGAGATATTCAGATCCATTAAATCATGCTATTTATGTCTGTGTAGTAGTTACACTTGCAAAATAGAATGCCACTATCTCAGAATGGAACTACAGCATAAAGCTACAGAAATGATGGGGTCTTCCATTTAAATGTTTTCTCGAGCGATGGAACATTTTTTTGTGATAGCACTTCAATATGTCACTGCAAGACAAGGGAAAATGCTTCCCTTTCTTGTACCGTTCTCTCACTGTCTACTCACGTTTATCATCTCTAGTTTTGTTTCTCTGGCATTTCATATTATAATACTTTGAGCTGAAAGAGATCTAACAATTAGTTCTTAAATTATGTATATGCGGCATGTGTTCCTATCTAGTTGAATAATGTCGCGTGATGATATTTACAATTTGATTTCAATTAGTTATGATTGATTGGGTATTGTTACTGAGATGCTGGTTCTATGCGATTCCAGGGCCTACCGTGCATTTTACATCTTAAACTGG</genome_strand>
        <mrna_strand>GGTTTCTACCCGCAATCCCCAACCCGGCAAACCCCTAATCTTCATCATTTTCTTCAGGATTTGACTCTAATCGTGAACAATCTAGGGCTGGAATAGAGCGGTTTTCGCAGTAGTAATCATGAATATCTTCAGACTGGCCGGAGACATGACACATTTGATTAGTGTCTTAGTTCTCCTCCTGAAAATCTATGCTACCAAATCATGCTCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATCATTGAAGACGCAAGAGTTATATGCTATTGTGTTTGTGGCTCGGTATCTGGATTTGTTCACAGACTTCATCTCTCTTTACAACACTGTGATGAAACTGGTTTTTATTGGGAGCTCCTTGGCCATTGTCTGGTGTATGAGGTACCATCGAGTTGTTAGGCGCTCATATGACCGTGAGCTAGACACTTTTCGCTATTGGATTCTTCTGGGGGCGTGTTTTGTTTTGGCACTTGTTCTTCATGAGAAGTTTACCCTTCAAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTCTGGGCTTTCTCCATATACCTACAGGCAGTTGCCATTCTTCCCCAATTGGTGCTCTTGCCAAGAACTGGAAATGTTGATAATCTGACTGGACAATATGCGTTCTTTCTTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCTACCGTGCATTTTACATCTTAAACTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U582748" ref_strand="+" ref_description="SGN-U582748 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|17977977|emb|CAC80990.1| (e_value=3e-167) dihydroorotase [Beta vulgaris]; (*ATH) AT4G22930.1 (e_value=9e-164) | Symbol: None | dihydroorotase, mitochondrial / DHOase (PYR4), identical to SP:O04904 Dihydroorotase, mitochondrial precursor (EC 3.5.2.3) (DHOase) {Arabidopsis thaliana} | chr4:12018906-12021602 FORWARD | Aliases: F7H19.110, F7H19_110; (*SWP) sp|O04904|PYRC_ARATH (e_value=9e-163) Dihydroorotase, mitochondrial OS=Arabidopsis thaliana GN=PYR4; ">
      <seq>ggtccagagtagtgcataagaagtttatgaactgatcaactctataaaggaatcagtacctttgattttctggctattctaaatttgacttgaaaaatcagacctctttaatcatatcatattgttttggttatccagatttcacatataccagttgttagctttggacacaaaagatcgttaaaaatctacagtgcgaaaatggagctctcaatcacacaacctgatgattggcatcttcatctccgtgatggtgatgttcttaaggcagttgtctctcacagtgcacatcactttgggagggcaatagtcatgccaaatttgaagcctcctatcactaccactgctgctgctgtagcataccgggaggcgatattgaaatctttacctgctgatagtgatttcaaccctcttatgacactttatttgacagatacaaccagtcctatggaaatcaaactagcaagagagagccaggtcgtatttggggtgaagttgtaccctgctggtgccacgacaaattctcaagatggagtgactgatctttttgggaagtgtttaccagttctacaagaaatggttgagcataatatgcctttgctggttcatggagaggttactaatcctgaggttgacatgtttgatagagaaaaggtattcattgaaacggttctaagacctttggtgcagaaatttccacgattgaaggtcgtgatggagcatgtcaccaccatggatgctgttaagtttgttgaatcttgcagtgaaggatttgttgcagcgactgtcaccccacaacatcttgttttaaacaggaattctctcttccaagggggcttacaaccgcataattactgccttccagtcctcaaaagagagatccacagggaggcacttgtgtcagctgtaacaagtggaagtaaaagattttttcttgggactgatagtgctcctcatgatagacgaagaaaagaatgttcttgtggatgtgctggtatttacaatgctcctgtagccttatcagtatatgcaaaggtgtttgaaaaggaaaatgcacttgacaagctcgaagcatttaccagcttcaatggaccagacttttatgggcttccgaggaacaactcaaagattaagttgagtaagacaccatggaaggtacccgaatccttttcatatgcatcaggagatataattcccatgtttgctggtgaaatgctcgactggttgccggctcctctctgagaaaggaaaaaaaaaagagattcccattctcatttgttgttcttgtactgtaatactgtgatttaactaaagatatagagtgcaggtgtgtcatctttcctttcatgttttagatattatcgcgatgataattattgaaacagtaagttttctatatgtgactgaactaaagctttagttcgacccattatgattgattttaaataaagatgaggtttagtac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="-" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="51105" stop="43394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50805" g_stop="50522" g_length="284"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="284" r_length="284" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50521" i_stop="50402" i_length="120">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50401" g_stop="50220" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="466" r_length="182" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="50219" i_stop="49580" i_length="640">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="49579" g_stop="49443" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="603" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="49442" i_stop="49078" i_length="365">
            <donor d_prob="0.252" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="49077" g_stop="48912" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="604" r_stop="769" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="48911" i_stop="48796" i_length="116">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.860" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="48795" g_stop="48679" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="770" r_stop="886" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="48678" i_stop="44414" i_length="4265">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="44413" g_stop="44253" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="887" r_stop="1047" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="44252" i_stop="44112" i_length="141">
            <donor d_prob="0.827" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="44111" g_stop="43694" g_length="418"/>
          <reference_exon_boundary r_type="cDNA" r_start="1048" r_stop="1465" r_length="418" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="-" ref_id="SGN-U582748" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1465</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U582748" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50805" e_stop="50522"/>
          <exon e_start="50401" e_stop="50220"/>
          <exon e_start="49579" e_stop="49443"/>
          <exon e_start="49077" e_stop="48912"/>
          <exon e_start="48795" e_stop="48679"/>
          <exon e_start="44413" e_stop="44253"/>
          <exon e_start="44111" e_stop="43694"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCCAGAGTAGTGCATAAGAAGTTTATGAACTGATCAACTCTATAAAGGAATCAGTACCTTTGATTTTCTGGCTATTCTAAATTTGACTTGAAAAATCAGACCTCTTTAATCATATCATATTGTTTTGGTTATCCAGATTTCACATATACCAGTTGTTAGCTTTGGACACAAAAGATCGTTAAAAATCTACAGTGCGAAAATGGAGCTCTCAATCACACAACCTGATGATTGGCATCTTCATCTCCGTGATGGTGATGTTCTTAAGGCAGTTGTCTCTCACAGGTTTCTAGTTTTAAATACTTCAGCTGATTGTGATTCAGTTTATACTTTATATTCCACTTTGTTAAATTCGGTTTCTTTATCTTGATTTTGACTTGTTCATTTTTGCATTATTTGATAAAGTGCACATCACTTTGGGAGGGCAATAGTCATGCCAAATTTGAAGCCTCCTATCACTACCACTGCTGCTGCTGTAGCATACCGGGAGGCGATATTGAAATCTTTACCTGCTGATAGTGATTTCAACCCTCTTATGACACTTTATTTGACAGATACAACCAGTCCTATGGAAATCAAACTAGCAAGTAAGTCCAATGCACTTTTGATGCATTAAAAATATATTAGATGTTATTCTTCTATATTATGACTGCTTTAATGGTGCGTGTATGATATTCTTCTATCAGAGAGCATGCATGTATTTCAGGAAACAAAAATTAATTTCAGTGAATGATAATGGTTGTATTTAAGCATCAATAAGATCATGACAGAAAAGGCACCAGTAGAAAGCCAATTTGTGAAACTTAGAAGTAGAGTTGAACTTTGAGAGACATTGTAATTCTTTGTTAAATCTCAATTCCCAATTTGTTCTCAAGACATTAAAACTGAAGGCTAGATTCTTGGCTATGCCAACCTTTTTTTTGGTCCTTTTATTATGTCTATTTTCGTGTCAGATCATAATCCTTGAAATTTGAAGTTAGTATTACGAGCTTTTTGTCTTTTATAAAGTCAGGGTCTACTCTCCTGTGTGGAAATTTAAACATGTCAAAATTTGCAGCATTTAAGTTTAACTGATTGTGTATTGTCATCTGGGTGCAGTTTTCTCCAATGTGAATGGCTCATGTTCCTATTTTTCTTACCATGAAAGCATTTAAGAATCATCCTTTTTTCCTTTTTCTTTTGTTGTTTTATCTATTTTTGTCCACTATTTCTGATAAAATGAGACAGGAGAGAGCCAGGTCGTATTTGGGGTGAAGTTGTACCCTGCTGGTGCCACGACAAATTCTCAAGATGGAGTGACTGATCTTTTTGGGAAGTGTTTACCAGTTCTACAAGAAATGGTTGAGCATAATATGCCTTTGCTGGTAATTTGATGCTAAACTTGGTGCTAAGCTTTCTTCCTGTTCCACTAGAACATTGCATAATGTGCATGCTAACCTTACCACCAAAAAATTGCTTTTTATCACTGTAGAAAGATGCAGATTCAAAGTTGTACCTTGTATCTGTTGAAGCTATACATGATTAATGTTATTTCTTGCCTACGCTATAGCTTTTCTAGTTTCAGTTTATCTTGGATTGCTATAAAATAGATTCAGCGTTTAACTGTAATGACTCAACTTTAATCATGTTTTTTCTTCCCCCAATTGCTCTGTCAAAGCTTGTGATTTTTGTCACTTCCCTTGAAAAAATTTCATTTTATAGGATTTTTATGTATTACATTTGACTGCAGGTTCATGGAGAGGTTACTAATCCTGAGGTTGACATGTTTGATAGAGAAAAGGTATTCATTGAAACGGTTCTAAGACCTTTGGTGCAGAAATTTCCACGATTGAAGGTCGTGATGGAGCATGTCACCACCATGGATGCTGTTAAGTTTGTTGAATCTTGCAGTGAAGGTAATCTTTTCAACTTTATCCACCTTTTTGAACTTAAAGTCTTCTTGTCAGATGAAAGAACTTCATTGACCTTCCTTTTTCAAATGCTAATTTAACCTTTCTATCATTCTTTAAAGGATTTGTTGCAGCGACTGTCACCCCACAACATCTTGTTTTAAACAGGAATTCTCTCTTCCAAGGGGGCTTACAACCGCATAATTACTGCCTTCCAGTCCTCAAAAGAGAGATCCACAGTAATATTCTTTATCCTTTCATATTGATGCTCCGATTCTCTTCTATCGCTTGGTGTTTGTCTATCGGTTGCAAGAACAATAATGAAGTAACATTACTTTTAATTTTGAAAAACCGACTAGGATTCTTTGGTTAACCACCTGTAGTGACTACAAGGGCATGTAGACCTTGTTTGGTTCTACAAAGGGGACAAGAACTTCATTTTTCTCATGCATAATGTATTTACCATTAACCTCCACTTGTTTGGTTCAACTCAAGTAAAGTGGAAGAGGTTGATTTCCTTATTTCCAATCTTAGATGGTTTTGAAAAGTTGAGGAATTGCATACTTACACTTGCATTTTAACAAACAAGGTTAATTATATTCCTTCCAGTGTGATAGGTAACTTGAGCAAATTAAGTCTACACTGCTAGCATTGTATGCTTCTATTTCATACATGAACCTGAATAGAATTACATTCAGTATCCTAATCAACATAAGCTGGACAATATACTAACTCTATCAACAAAAGGAAACCATATCGAGTTCAAGGCCAGATGCTTAGTTCTACTTTTTTGTTGGGAAGTTTATTTTTGTCCATTCTTGGAGCTGACTCTTCCTACTTTTGTAATTATGCATCTGCTAGATGCTTTGTTTATCAATACACCATTTATTTCATCAAAAATAAAATAAAATATCAAGTTGAAGCAACAAGCTTTACATTCTAGTATGCAGGGATCCCGATGGGTTTGTTGATGTTACAGTTCTTACCTTCTCCAGCAAGCCTTTTATTGCACTCTCCAACTCTAATTTCTCCTCAGTAGTAATCTTACCGTAGCATTTTTTCCATGATTGATTTCATCCCCTTCAGCTTCTGCTTGATTAGTTGTACCTGTGACTTCCCCTTACCTGCTTTCAGCAAGGAGAGTGGAGTGACAGAGTTGAAGGGATAAGAGCTTAAAGTTAAATTTACAGCACCAAAAGGACTTTGATGTACTTATTCTCTGAAGGCATTTTCAGCATCTGAACAGTGCTTGAATCAGATTACACTTAAATGTTGCCATCCTCTGGGATTATGATGGCAGACTTTTTGTCACCCAGCCAATCCTCACAGAACGACTTCAACATTGAAATTTTGCAACTTTTTAAGTATACACTTCAATCTTCCTACCCCATCTTCTACACAAATTACCTACCCCGTGTGAAGCCTGTTGAAGAATTTCGCATTCCTTTCGCAGATTCTCCTCATCAATATTGAGTCTGCTAGTGATTGACTGCTTTACTCTACTATCGTGAACCATCTATCTTCATTGTTGCTAATATCATATAACTCGAATGACTCATCTCCTGAAACAAAAAAAGTTCTCTTCTTCATAAGGAGTGAAAGAAACAAAAGAGAAATTGCACATTTTTCAAGAGAGAGCACTGTTTTAATATAAGTTCTTAATCAAACTTTTCAGCAGAATGGTGTTGCATGATTTAACTGTAAATAGACATCTTTCTTGCTCCTCCAATAAATGTTGTCCTTCTTGTCTGTGCGTAAGGAGTAAGTCCCAAGATAAAGAGACTGCAGTTTCTATTAACTACCCAACCATTGCAATGCCTTCTAAAGATGATGTTCAAGCCATTTTTGAGTAATAATCTGTTACGCATTCTGATTGGCTGCCAGAGTGGATACACACTTGAGAGGGGTACGGCCATTCCAAAAAGCTGATTTTCTGCCATTTCCCAACTTGAAAGATGTTGTTTCCTAGGAATTCGTCTAAAGAAAGTCCAGATGCTTTTCCCGACAGAGAAACCATACAAGAGCTAGTAAGCTTTGTTATCCACAGGTGTTGCATACCATATTTGGTCTCGATGACTTACTCCGTTTTGCATTCTCACCTTTTGTGAATCTCCATGACCATTTGTTTAAGAGGCTATCATTGTGTGCTTTCAGATTCCGTACTCCCAGGCCTCCAGATTTTTATCTTTTTGGACAGCTTCCCACTTAGCACTGATGAATCCCCTAATGATTTTTATCAAAATCATTAAGTTAAGGTAGATACACATCTTGTCATATGATCAAATGGTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTTGTTGACTGGTCTGATATCCGTGAGCAAAAACGGCTTATGGTATTGCGAGCTTCAGTCGCACTACACGGTCGTTCTGTTACTCTTTATGAGAAAGCGTTCCCGCTTTCAGAGCAATGTTCAAAGAAAGCTCATGACCAATTTCTAGCCGACCTTGCGAGCATTCTACCGAGTAACACCACACCGCTCATTGTCAGTGATGCTGGCTTTAAAGTGCCATGGTATAAATCCGTTGAGAAGCTGGGTTGGTACTGGTTAAGTCGAGTAAGAGGAAAAGTACAATATGCAGACCTAGGAGCGGAAAACTGGAAACCTATCAGCAACTTACATGATATGTCATCTAGTCACTCAAAGACTTTAGGCTATAAGAGGCTGACTAAAAGCAATCCAATCTCATGCCAAATTCTATTGTATAAATCTCGCTCTAAAGGCCGAAAAAATCAGCGCTCGACACGGACTCATTGTCACCACCCGTCACCTAAAATCTACTCAGCGTCGGCAAAGGAGCCATGGATTCTAGCAACTAACTTACCTGTTGAAATTCGAACACCCAAACAACTTGTTAATATCTATTCGAAGCGAATGCAGATTGAAGAAACCTTCCGAGACTTGAAAAGTCCTGCCTACGGACTAGGCCTACGCCATAGCCGAACGAGCAGCTCAGAGCGTTTTGATATCATGCTGCTAATCGCCCTGATGCTTCAACTAACATGTTGGCTTGCGGGCGTTCATGCTCAGAAACAAGGTTGGGACAAGCACTTCCAGGCTAACACAGTCAGAAATCGAAACGTACTCTCAACAGTTCGCTTAGGCATGGAAGTTTTGCGGCATTCTGGCTACACAATAACAAGGGAAGACTCACTCGTGGCTGCAACCCTGCTTACTCAAAATCTATTCACACATGGTTACGTTTTGGGGAAATTATGAGGGGATCTCTCAGCACTTAGCATGATTAAAAGCTTTCTTGTCCCTGTTTTCATTTCAGATTCGACGAATCTTATCAATTTCTTGGCCAGATATGTAGGAATAAGGAATAAAGAGATTGTGTAAGTGGGAAGTGAGTCCAAAACACTATTTGTGAAAACTAATCTGCCTTTGCTTATATTTCGTTAAATCAAATCTAAAAGCCTATAATCTTTTCGGAATATGGCATTTTGATTTTGTTGTATGGATTACTGTCATAACAAAGAAGAAATGAATTAAACAGCTATTGAGCCATCTACCCTGAATTTTGAAAGTTGGGTAGAAGCTATATTTGCCTGTAATTGACCCTCTTTTTGTGTGGAATAATTTGTTGAAAGTTTGTTCTTCTACCTGATATTTTCTTACCTCTTTGTAAGAGTTATGACTACCCTGAAATTTTGAAAGTTAGGTAAAAACTGTAGAGCTATATTTGCCTGTAATTGACCCTCTTTTTGTGTAGAATAATTTGTTGAAAGTTTCTTCTTTACCTGATTTCTTTTACCTCTGTGTAAGAGATGAAAGTTTTAGTCTTACTGATGCTAATGTGTCACGAATCACTACTTGATCAGGCTTTCTTTGATTTGCTAGTTCCATCCATTGCCTTTTATTTTCCTAGACATGTGAACTTGTTGAAAATTTGATGCAAACGGTGCTGTGAATGTGCTAAAAAAAGGAAATGAATGTATGGCATGATTGTCCTTGTTGAAACAAGGTGCTCTTTTTTCTTATAAGAATTTGCCAATTTGGGGAGCATGTTTAATGAGACTTGGAAAAGTACCAAGTGCGTGAGAAAAAACTCATCTTTATTAATATATTCATTATTCGCATAATTACAAGATCTATTGCACTAATCTTGTCCCCTTACTCCTACTACTTTTCTCTTTTCTCTTGTTCACTTGGTATAAATTTTAATCTAAGCAAGATTGCTTTGAATAACACAGGGGAGGCACTTGTGTCAGCTGTAACAAGTGGAAGTAAAAGATTTTTTCTTGGGACTGATAGTGCTCCTCATGATAGACGAAGAAAAGAATGTTCTTGTGGATGTGCTGGTATTTACAATGCTCCTGTAGCCTTATCAGTATATGCAAAGGTGTTTGAAAAGGTAATTGCAATAGATATCTACAGCGCTTCTCATGTTGAACTCATCCATGTTATAATGTTTCTAATTACTTGGGAAAGGTTCATTAGTTTTAGCAGCTATCGCTACAAGTCAATGACTTAGATTTGGTTGTCTGCATTTTAGGAAAATGCACTTGACAAGCTCGAAGCATTTACCAGCTTCAATGGACCAGACTTTTATGGGCTTCCGAGGAACAACTCAAAGATTAAGTTGAGTAAGACACCATGGAAGGTACCCGAATCCTTTTCATATGCATCAGGAGATATAATTCCCATGTTTGCTGGTGAAATGCTCGACTGGTTGCCGGCTCCTCTCTGAGAAAGGAAAAAAAAAAGAGATTCCCATTCTCATTTGTTGTTCTTGTACTGTAATACTGTGATTTAACTAAAGATATAGAGTGCAGGTGTGTCATCTTTCCTTTCATGTTTTAGATATTATCGCGATGATAATTATTGAAACAGTAAGTTTTCTATATGTGACTGAACTAAAGCTTTAGTTCGACCCATTATGATTGATTTTAAATAAAGATGAGGTTTAGTAC</genome_strand>
        <mrna_strand>GGTCCAGAGTAGTGCATAAGAAGTTTATGAACTGATCAACTCTATAAAGGAATCAGTACCTTTGATTTTCTGGCTATTCTAAATTTGACTTGAAAAATCAGACCTCTTTAATCATATCATATTGTTTTGGTTATCCAGATTTCACATATACCAGTTGTTAGCTTTGGACACAAAAGATCGTTAAAAATCTACAGTGCGAAAATGGAGCTCTCAATCACACAACCTGATGATTGGCATCTTCATCTCCGTGATGGTGATGTTCTTAAGGCAGTTGTCTCTCACAG........................................................................................................................TGCACATCACTTTGGGAGGGCAATAGTCATGCCAAATTTGAAGCCTCCTATCACTACCACTGCTGCTGCTGTAGCATACCGGGAGGCGATATTGAAATCTTTACCTGCTGATAGTGATTTCAACCCTCTTATGACACTTTATTTGACAGATACAACCAGTCCTATGGAAATCAAACTAGCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGAGCCAGGTCGTATTTGGGGTGAAGTTGTACCCTGCTGGTGCCACGACAAATTCTCAAGATGGAGTGACTGATCTTTTTGGGAAGTGTTTACCAGTTCTACAAGAAATGGTTGAGCATAATATGCCTTTGCTG.............................................................................................................................................................................................................................................................................................................................................................................GTTCATGGAGAGGTTACTAATCCTGAGGTTGACATGTTTGATAGAGAAAAGGTATTCATTGAAACGGTTCTAAGACCTTTGGTGCAGAAATTTCCACGATTGAAGGTCGTGATGGAGCATGTCACCACCATGGATGCTGTTAAGTTTGTTGAATCTTGCAGTGAAG....................................................................................................................GATTTGTTGCAGCGACTGTCACCCCACAACATCTTGTTTTAAACAGGAATTCTCTCTTCCAAGGGGGCTTACAACCGCATAATTACTGCCTTCCAGTCCTCAAAAGAGAGATCCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGGCACTTGTGTCAGCTGTAACAAGTGGAAGTAAAAGATTTTTTCTTGGGACTGATAGTGCTCCTCATGATAGACGAAGAAAAGAATGTTCTTGTGGATGTGCTGGTATTTACAATGCTCCTGTAGCCTTATCAGTATATGCAAAGGTGTTTGAAAAG.............................................................................................................................................GAAAATGCACTTGACAAGCTCGAAGCATTTACCAGCTTCAATGGACCAGACTTTTATGGGCTTCCGAGGAACAACTCAAAGATTAAGTTGAGTAAGACACCATGGAAGGTACCCGAATCCTTTTCATATGCATCAGGAGATATAATTCCCATGTTTGCTGGTGAAATGCTCGACTGGTTGCCGGCTCCTCTCTGAGAAAGGAAAAAAAAAAGAGATTCCCATTCTCATTTGTTGTTCTTGTACTGTAATACTGTGATTTAACTAAAGATATAGAGTGCAGGTGTGTCATCTTTCCTTTCATGTTTTAGATATTATCGCGATGATAATTATTGAAACAGTAAGTTTTCTATATGTGACTGAACTAAAGCTTTAGTTCGACCCATTATGATTGATTTTAAATAAAGATGAGGTTTAGTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U601842" ref_strand="+" ref_description="SGN-U601842 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gtgtttaattcatttcttctttgttatgacagtaatccatacaacaaaatcaaaatgccatattccgaaaagattataggcttttagatttgatttaacgaaatataagcaaaggcagattagttttcacaaatagtgttttggactcacttcccacttacacaatctctttattccttattcctacatatctggccaagaaattgataagattcgtcgaatctgaaatgaaaacagggacaagaaagcttttaatcatgctaagtgggaagctgtccaaaaagataaaaatctggaggcctgggagtacggaatctgaaagcacacaatgatagcctcttaaacaaatggtcatggagattcacaaaaggtgagaatgcaaaacggagtaagtcatcgagaccaaatatggtatgcaacacctgtggataacaaagcttactagctcttgtatggtttctctgtcgggaaaagcatctggactttctttagacgaattcctaggaaacaacatctttcaagttgggaaatggcagnaaatcagctttttggaatggccgtacccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="+" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="44812" stop="47315"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45111" g_stop="45368" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="258" r_length="258" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45369" i_stop="46706" i_length="1338">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.731" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46707" g_stop="47015" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="567" r_length="309" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="+" ref_id="SGN-U601842" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U601842" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45111" e_stop="45368"/>
          <exon e_start="46707" e_stop="47015"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGTTTAATTCATTTCTTCTTTGTTATGACAGTAATCCATACAACAAAATCAAAATGCCATATTCCGAAAAGATTATAGGCTTTTAGATTTGATTTAACGAAATATAAGCAAAGGCAGATTAGTTTTCACAAATAGTGTTTTGGACTCACTTCCCACTTACACAATCTCTTTATTCCTTATTCCTACATATCTGGCCAAGAAATTGATAAGATTCGTCGAATCTGAAATGAAAACAGGGACAAGAAAGCTTTTAATCATGCTAAGTGCTGAGAGATCCCCTCATAATTTCCCCAAAACGTAACCATGTGTGAATAGATTTTGAGTAAGCAGGGTTGCAGCCACGAGTGAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTCTGAGCATGAACGCCCGCAAGCCAACATGTTAGTTGAAGCATCAGGGCGATTAGCAGCATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAGGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGACAATGAGCGGTGTGGTGTTACTCGGTAGAATGCTCGCAAGGTCGGCTAGAAATTGGTCATGAGCTTTCTTTGAACATTGCTCTGAAAGCGGGAACGCTTTCTCATAAAGAGTAACAGAACGACCGTGTAGTGCGACTGAAGCTCGCAATACCATAAGCCGTTTTTGCTCACGGATATCAGACCAGTCAACAAGTACAATGGGCATCGTATTGCCCGAACAGATAAAGCTAGCATGCCAACGGTATACAGCGAGTCGCTCTTTGTGGAGGTGACGATTACCTAACAATCGGTCGATTCGTTTGATGTTATGTTTTGTTCTCGCTTTGGTTGGCAGGTTACGGCCAAGTTCGGTAAGAGTGAGAGTTTTACAGTCAAGTAAGGCGTGGCAAGCCAACGTTAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCGCACATTTTGTTGTCTGATTATTGATTTTTGGCGAAACCATTTGATCATATGACAAGATGTGTATCTACCTTAACTTAATGATTTTGATAAAAATCATTAGGGGATTCATCAGTGCTAAGTGGGAAGCTGTCCAAAAAGATAAAAATCTGGAGGCCTGGGAGTACGGAATCTGAAAGCACACAATGATAGCCTCTTAAACAAATGGTCATGGAGATTCACAAAAGGTGAGAATGCAAAACGGAGTAAGTCATCGAGACCAAATATGGTATGCAACACCTGTGGATAACAAAGCTTACTAGCTCTTGTATGGTTTCTCTGTCGGGAAAAGCATCTGGACTTTCTTTAGACGAATTCCTAGGAAACAACATCTTTCAAGTTGGGAAATGGCAGAAAATCAGCTTTTTGGAATGGCCGTACCCCT</genome_strand>
        <mrna_strand>GTGTTTAATTCATTTCTTCTTTGTTATGACAGTAATCCATACAACAAAATCAAAATGCCATATTCCGAAAAGATTATAGGCTTTTAGATTTGATTTAACGAAATATAAGCAAAGGCAGATTAGTTTTCACAAATAGTGTTTTGGACTCACTTCCCACTTACACAATCTCTTTATTCCTTATTCCTACATATCTGGCCAAGAAATTGATAAGATTCGTCGAATCTGAAATGAAAACAGGGACAAGAAAGCTTTTAATCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTAAGTGGGAAGCTGTCCAAAAAGATAAAAATCTGGAGGCCTGGGAGTACGGAATCTGAAAGCACACAATGATAGCCTCTTAAACAAATGGTCATGGAGATTCACAAAAGGTGAGAATGCAAAACGGAGTAAGTCATCGAGACCAAATATGGTATGCAACACCTGTGGATAACAAAGCTTACTAGCTCTTGTATGGTTTCTCTGTCGGGAAAAGCATCTGGACTTTCTTTAGACGAATTCCTAGGAAACAACATCTTTCAAGTTGGGAAATGGCAGNAAATCAGCTTTTTGGAATGGCCGTACCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589391" ref_strand="+" ref_description="SGN-U589391 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|218694563|ref|YP_002402230.1| (e_value=1e-106) transposase,; ">
      <seq>atcctgcacagcgctaatacatcgcctcatagtttccccaatatctacccatgtgtgaatatattttgagtaagcagggttgcagccacgaatgagtcttcccttgttattgtgtagccagaatgccgcaaaacttccatgcctaatccaactgttgagagtacgtttcaatttctgactgtgttagcctggaaatgcttgtcccagccttgtttctgaccgtgaacgcgccgccagccaacatgttagttgaagacatgcagggcgattagcaacatgatatcaaaacgctctgagctgctcgttcggctatggcgtaagcctagtccgtatgcaggacttttcaagtctcggaaggtttcttcaatctgcattcgcttccaatagatattaacaagttgtttgggtgttcgaatttcaacaggtaagttaattgctagaatccatggctcctttgccaacgctgagtagattttaggtgacgggtggtgacaatgagtccgtgtcgagcgctgattttttcggcctttacagcgagatttatacaataaaatttggcatgagattggattgcttttagtcagcctcttatagcctaaagtctttgagtgactaaatgacatatcatgtaagttgctgataggtttccagttttccgctcctaggtctgcatattgtacttttcctcctactcgactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="+" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="45065" stop="46360"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45365" g_stop="46060" g_length="696"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="699" r_length="699" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="+" ref_id="SGN-U589391" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45365" e_stop="46060"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCATGCTAAGTGCTGAGAGATCCCCTCATAATTTCCCCAAAACGTAACCATGTGTGAATAGATTTTGAGTAAGCAGGGTTGCAGCCACGAGTGAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTCTGAGCATGAACGC-CCGCAAGCCAACATGTTAGTTGAAG-CAT-CAGGGCGATTAGCAGCATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAGGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTT</genome_strand>
        <mrna_strand>ATCCTGCACAGCGCTAATACATCGCCTCATAGTTTCCCCAATATCTACCCATGTGTGAATATATTTTGAGTAAGCAGGGTTGCAGCCACGAATGAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAATCCAACTGTTGAGAGTACGTTTCAATTTCTGACTGTGTTAGCCTGGAAATGCTTGTCCCAGCCTTGTTTCTGACCGTGAACGCGCCGCCAGCCAACATGTTAGTTGAAGACATGCAGGGCGATTAGCAACATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAAGCCTAGTCCGTATGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCCAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAATTGCTAGAATCCATGGCTCCTTTGCCAACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTACAGCGAGATTTATACAATAAAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAAATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCCTACTCGACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U589393" ref_strand="+" ref_description="SGN-U589393 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|151940600|gb|EDN59046.1| (e_value=9e-71) hypothetical; ">
      <seq>ggttaccactggaagcgcttgacccaaccttgttgtatgcatcatgaacgccctcttgctcatcatgttagttgaagcatcacggcgagttaggcatcgatgatatcaaaacgctctgagctgctcgttcagttaatggcgtatgccatagtccgtaggcaggacttttgaagatctcggaaggtttcttcaatctgcattcgcctctgaatagatattaacaagttgtttgggtgttcgaatttcaacaggtaagttagttgctagaacccatggctcctttgccgacgctgagtagattttaggtgacgggtggtgacaatgagtccgtgtcgagcgctgattttttcggcctttagagcgagatttatacaatagaatttggcatgagattggattgcttttagtcagcctcttatagcctaaagtctttgagtgactagatgacatatcatgtaagttgctgataggtttccagttttccgctcctaggtctgcatattgtacttttcctcttactcgacttaaccagtaccaacccagcttctcaacgggattataccatggcactttaaagccagcatcactga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="+" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="45247" stop="46424"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45552" g_stop="46124" g_length="573"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="590" r_length="583" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="+" ref_id="SGN-U589393" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>573</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589393" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45552" e_stop="46124"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGGAAGTGCTTGTCCCAACCTTGTT-TCTG-AGCATGAACGCCCGCAAGC-CAACATGTTAGTTGAAGCATCAGGGCGA-TTA-GCAGC-ATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCT-ATGGCGTAGGCC-TAGTCCGTAGGCAGGACTTTTCAAG-TCTCGGAAGGTTTCTTCAATCTGCATTCGCTTC-GAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGA</genome_strand>
        <mrna_strand>ACTGGAAGCGCTTGACCCAACCTTGTTGTATGCATCATGAACGCCCTCTTGCTCATCATGTTAGTTGAAGCATCACGGCGAGTTAGGCATCGATGATATCAAAACGCTCTGAGCTGCTCGTTCAGTTAATGGCGTATGCCATAGTCCGTAGGCAGGACTTTTGAAGATCTCGGAAGGTTTCTTCAATCTGCATTCGCCTCTGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAACCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGGATTATACCATGGCACTTTAAAGCCAGCATCACTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604818" ref_strand="+" ref_description="SGN-U604818 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|116267070|gb|ABJ96340.1| (e_value=3e-56) transposase; ">
      <seq>ataatcagacaacacttgtgcaaaatcgatcttttaacctaatctacttttacccttctgccccgatttacacttatcaacgactcaacttcttaacgatggcttgccacgccttacttgactgaataactctcactcttaactaacttggacgtaacctgccaaccatatctatatctaaacataacatcttactaatctaccgattgttacgtaatcgtctcctccacaaagagcgactcgctgtataccgttggcatgctagctttatctgttcgggcaatacgatgcccattgtacttgttgactggtctgatatccgtgagcaaaaacggcttatggtattgcgagcttcagtcgcactacacggtcgttctgttactctttatgagaaagcgttcccgctttcagagcaatgttcaaagaaagctcatgaccaatttctagccgaccttgcgagcattctaccgagtaacaccacaccgctcattgtcagtgatgctggctttaaaagtgccatggtataaatccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="-" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="46838" stop="45787"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46615" g_stop="46086" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="532" r_length="532" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="-" ref_id="SGN-U604818" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U604818" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46615" e_stop="46086"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCT-CTTTACCAATTCTGCCCCGAATTACACTTA-AAACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTTGTTGACTGGTCTGATATCCGTGAGCAAAAACGGCTTATGGTATTGCGAGCTTCAGTCGCACTACACGGTCGTTCTGTTACTCTTTATGAGAAAGCGTTCCCGCTTTCAGAGCAATGTTCAAAGAAAGCTCATGACCAATTTCTAGCCGACCTTGCGAGCATTCTACCGAGTAACACCACACCGCTCATTGTCAGTGATGCTGGCTTT-AAAGTGCCATGGTATAAATCCG</genome_strand>
        <mrna_strand>ATAATCAGACAAC-ACTTGTGCAAAATCGATCTTTTAACCTAATCTACTTTTACCCTTCTGCCCCGATTTACACTTATCAACGACTCAACTTCTTAACGATGGCTTGCCACGCCTTACTTGACTGAATAACTCTCACTCTTAACTAACTTGGACGTAACCTGCCAACCATATCTATATCTAAACATAACATCTTACTAATCTACCGATTGTTACGTAATCGTCTCCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTTGTTGACTGGTCTGATATCCGTGAGCAAAAACGGCTTATGGTATTGCGAGCTTCAGTCGCACTACACGGTCGTTCTGTTACTCTTTATGAGAAAGCGTTCCCGCTTTCAGAGCAATGTTCAAAGAAAGCTCATGACCAATTTCTAGCCGACCTTGCGAGCATTCTACCGAGTAACACCACACCGCTCATTGTCAGTGATGCTGGCTTTAAAAGTGCCATGGTATAAATCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U604614" ref_strand="+" ref_description="SGN-U604614 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|113205155|gb|ABI34274.1| (e_value=3e-45) IS10; ">
      <seq>aatcgtaagattaaggtaaatgacatacttgtcagatgatccaatggatacaccacaaatctataatcagacaacaaatatgtgcgaactcgatattttacacgactctcgttaccgattctgccccgaattacacttaagacgactcaacagcttaacgttggcttgccacgccttacttgactgtaaaactctcactcttaccgaacttggccgtaacctgccaaccaaagcgagaacaaaacataacatcaaacgaatcgaccgattgttaggtaatcgtcacctccacaaagagcgactcgctgtataccgttggcatgctagctttaactgttccggcacaaagacgcccactgtacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="-" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="46954" stop="46015"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46677" g_stop="46315" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="-" ref_id="SGN-U604614" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>363</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U604614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46677" e_stop="46315"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCATTAAGTTAAGGTAGAT-ACACATCTTGTCATATGATCAAATGGTTTCGCCAAAAATCAATAATCAGACAACAAA-ATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTT</genome_strand>
        <mrna_strand>AATCGTAAGATTAAGGTAAATGACATA-CTTGTCAGATGATCCAATGGATACACCACAAATCTATAATCAGACAACAAATATGTGCGAACTCGATATTTTACACGACTCTCGTTACCGATTCTGCCCCGAATTACACTTAAGACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTAACTGTTCCGGCACAAAGACGCCCACTGTACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600659" ref_strand="+" ref_description="SGN-U600659 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|209947532|ref|YP_002291029.1| (e_value=1e-21) hypothetical; ">
      <seq>ctgatgaatcccctaatgatttttatcaaaatcattaaattaaggtatatacacatcttgtcatatgatcacatggtttcgccaaaaatcaataatcatacaaccaaatgtgctaactccatattttacacgactctctttaccaattctgccccctattacacttaaatcgactcaacagcttatcgttggcttgccacgccttacttgactgtaaaactct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="-" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="47006" stop="46184"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46706" g_stop="46484" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="-" ref_id="SGN-U600659" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>223</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U600659" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46706" e_stop="46484"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATGAATCCCCTAATGATTTTTATCAAAATCATTAAGTTAAGGTAGATACACATCTTGTCATATGATCAAATGGTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCT</genome_strand>
        <mrna_strand>CTGATGAATCCCCTAATGATTTTTATCAAAATCATTAAATTAAGGTATATACACATCTTGTCATATGATCACATGGTTTCGCCAAAAATCAATAATCATACAACCAAATGTGCTAACTCCATATTTTACACGACTCTCTTTACCAATTCTGCCCCCTATTACACTTAAATCGACTCAACAGCTTATCGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U572351" ref_strand="+" ref_description="SGN-U572351 Tomato 200607#2 [4 ESTs aligned] (*GB) gi|18404455|ref|NP_564630.1| (e_value=1e-48) expressed protein [Arabidopsis thaliana]; (*ATH) AT1G53400.1 (e_value=8e-51) | Symbol: None | expressed protein | chr1:19928439-19930268 FORWARD | Aliases: F12M16.29, F12M16_29; (*SWP) sp|Q4V8W7|UBTD1_DANRE (e_value=6e-22) Ubiquitin domain-containing protein 1 OS=Danio rerio GN=ubtd1; ">
      <seq>gaaaggaagtttctaattttgcccaaaatcggtagaaaaaaaaaagtagtagtatatatatagctgtcattgggagagttgtgagcacgcaataatactccctctaaagaagcactaaattttccctttttgcatattaaacgctctccatctaacattttgttcagttgtcaataattgactgggaaattgattcccgagatcggcaactggtgttcttcaatactcaattttcgtgcaactctgttaaaatgggttgcgttggatcctcacgtaccaaaggagatgaatctgtcaggaaaataagaaaaccaaagccatggagacacacagaaccaataacaagagctcagcttctaaaaatgcgtgaagaattctgggacactgcaccacactatgggggaaaaaaagagatctgggatgcgctacgtgctgctgccgaggcagaaataggccttgcacaaacaatcgtgaacagtgctgggataattgttcaaaccactgatctaacagtctgctatgatgagagaggtgccaagtatgacttgcctctatacgttttgagcgaaccaacaaatctgactggtgaaaactgagaaggcaatataatcaagtgttcatgcttcattgagactgtaaatgctgtaaattgctctcacaagtcatttctctcaaacattcatttcgttttatgcattatggtcctgtttcacgacatcaagaatcgtctgtcgcagcagcaacatgcaccatgatattcttttggacataatatctctagcctgaanagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="+" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="52676" stop="59215"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52975" g_stop="53262" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="288" r_length="288" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53263" i_stop="57251" i_length="3989">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57252" g_stop="57374" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="411" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="57375" i_stop="58458" i_length="1084">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="58459" g_stop="58578" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="531" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="58579" i_stop="58655" i_length="77">
            <donor d_prob="0.803" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="58656" g_stop="58915" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="791" r_length="260" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="+" ref_id="SGN-U572351" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>791</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U572351" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52975" e_stop="53262"/>
          <exon e_start="57252" e_stop="57374"/>
          <exon e_start="58459" e_stop="58578"/>
          <exon e_start="58656" e_stop="58915"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGAAGTTTCTAATTTTGCCCAAAATCGGTAGAAAAAAAAAAGTAGTAGTATATATATAGCTGTCATTGGGAGAGTTGTGAGCACGCAATAATACTCCCTCTAAAGAAGCACTAAATTTTCCCTTTTTGCATATTAAACGCTCTCCATCTAACATTTTGTTCAGTTGTCAATAATTGACTGGGAAATTGATTCCCGAGATCGGCAACTGGTGTTCTTCAATACTCAATTTTCGTGCAACTCTGTTAAAATGGGTTGCGTTGGATCCTCACGTACCAAAGGAGATGGTAATTTGTTTCAACACTTTTTATTGATACCCATTTGGTTACTTCGTGTTTCGTTTGTGTTTGAAGTTGATTGCTTGTTTTCGTGATGAAATTTATTGTTTTCTTCAATTTTTAGTGATACCCATTTGGTTTTCTGATGTATGAAGTGAGTTTCGCAGTGTTTTTTTGAAGTTGATGCTCTCGCTTTCTTGATGAAATTATTGTTTTCTTCAATTTTTAGTGATACCCATTTGGTTCCTTGATGTATGAAGTGAGTTTTCGCTTTTTTGAAGTTGATTGCTCTCGCTTTCTTGATAAAATTATTGGTTTCTTCAATTTTAAGTGATACCCATTTGGTTTCCTGATGTACGAAGTGAGTTTTCGCAGTGTTTTTTTTTTGAAGTTGATTGCTCTCGCTTTTTTGATTAAATTATTGTTTTCTTCAATATTTAATGATACCCATTTGGTTTACTGATGTATGAAGTCCGTGTTTGAAGTTGATTGCTCTCTTTCTTGGTGAAATTATTCTTTTTCTTTAACTTTTAGAGATACACATTTGGTTTTCCAGACAGAAAATGTGTCTTTGTGCGACTCCACTTTCTGTGAGTTCGAAGATTGCATTTGTTCTGGAAGTTGATTGCATTCTTGTTATTATTGGTAGAGTTGTTTGTTTTAGTAATTTTTGGAGATCTCAGTTGGTTATACTGGTATATTGCTATGTATGATCTTGCATTTCTTGGACTCTTTGATTGGTCCTCAAGTAAGTGATATTTGATAATAGATAATTAGTGATGAAATAGGTATTGGGTAGGTATTAGCTCTATTTATATAGCTGTAAGTTCCATTTTGTTGGATATTGTGTCTGTTTGATACTAATGGGTAGGTTGTAGTTGTGGGGATGATGATGTGTTGGTTATTGACTTAAAATATGAGTGTGACAATGAAGAATAGGTCGATAAACTATTGGGGTGAAGTCGTCATCCAATTTATTGAACTGTTCTTTTGTTCTTTCCTTTATATTTGATAAGAGACATCACTATCCTTTTTTCTTTAATAAAGAGAAACCACTGTTTCTTATCATTGGCATTAGTCATCTTGTCTTATTCATATTTCAACTTTGATGTTGTATCCAAAGAAGATTTAACTGAAAGACGTGCTAGATGCAAAAGAATTTGAATAAATAAAGTATATTATTTGGGAGTCGAGAAATACCCCCGAAACAATTAATTAGATATTTGGCAGAATTATTGACAAAGATGCAGAAATAACTCAACATATATGCACTGGAATATAGGTTGGCCAAGTGGCAGAGTACATTCGCCTACTATTTAAATTGATGTACTCATTGAAATTGAAAGGAGAATTATATTACCTAATGAAGAATCATGTGACGTTAAGTGTAAAATGTTAGGCAACTGGAAAGTAATGTTTAGTCCAGAGTCAATTTTATTTAAATAATATAAGATTTGTAATAATAATGACAGAGACTAGAATCAAGGAACTGAAGGGAAGGACTGAAAAACAACATTGTTTGGTAGTGTTGGAAAAAAGGCCATGTTTAATGAAGAATGTGTCTTAGATCAAGTCGGTGTTGACAATTTTAAAATTTTAGCTGGTAAAATGGTGATGGTAAAGCATAGTGGAGTTTTTGTCAAAAATCTGGAGTACTTTCATCATTAGTTTTTTTAGGGTTTGATCTTCAGTTCATAGTTATCGAAGTCCATGCATGCTAGTCGACTGTTTTGATTCTTTCCTCTGAAAGAGATCAACTCAAATAATCAAATCAGATAAAAGTTTGTCTTAATACACTGAATATGGAAATGCACTAGGAAGAGCTTTTTTCTCTATTGAACTTTGTATGGTGTACCTGTTTGTCGGAAAAGATCCTTTTTTCCGATGGTATTGAAAGGTGCACTGCTGGATTTTGATAAAATTGCTCATTTTATCAAAGGTAGTATTAATGAACATATGGTAAAGATTTAGTCTTTGGTTGTACGATTTGACTTTTGTTTGCTTTGCAATTCGACATATTTTCCAATTCACAACCTGTAAAGTTTTTCGCCGGTGTTGCTTCACTTCTTTACTAATATATCACGCAGGATTTTTGGTTTTGTTTGTGGACTTGTAATTTTGCTCTGTTCGTCTTCCTTGATAAGTTGTAATTATTGCTATGCTGACTTAAGCTTTTATTACAACTTCTTGGTATTTCGCATCACCTCATGGTTTTATATTTTGGTTTATATTTTGCTATAATTGATTTCTCATTACCTCCCTAGGCTTTTATTATGACCATGTGCTCTACTATTCTTTCATATTCAATGATCTACAAGTTTTTGTTGTTCCGGACTAATTTCCCCGTTATTTAATGATCCTTCTATTCTTTTTTCTTTTCCCCTCATTAAAGACATGGTTCTTACTATTGCTGCTGGTGCCCTTCATCTCGTGCAGAATTATGTGCTTTACAGACTGTTATATTGAAGTGCTGATGATTGTTTAGTGCTACTGTTAAAATAGATCCATGTAGCTTGTATTTTATCTAATTGGATGTTGTATAATTTGTCTCTTCTCAGTGGCATTCTAGTAGAGTTATATTCCTAAAAAGATAGTCTAGATCAGCACTAGATCACTAGTGATGTTACTATCTACTTTTTAGAGGCATCTGTCCTCAGATATTTGTCTTTGTCCTTTGCATGTTGGCTAATTTAATTTAAAGCATGGGAAAATAGTGGTCTACGTCCTGAAATGTAGTAAGGAACTTTGGAAAGGAAAAGAGATGCCAAGGCGTTTTATTTATAAAGTGATGATTATGATTTTTAAAGGAGTAGCAGTGCATGCCACTATTAACAAACTAAGTCTGATTAAACAATCTAAAAATGTGGGACGAACCACCTTACACCCAAAAGCAAATTCTAGTGCCAATTTATGCTTGCCAATATAACTCATTTTTGGTGGCTGTTAGTGAGCATAATGATTTGGGTCCACCTTACACCCAATAAGGGGGTTCGATGAATTTAGAATTCTAGATACTTTGCGATATATATGCGATGGATAGTGTTTGATACTCCAGCTATTGCTACTGTGACTGCTCTGTGGTGTTGCACTCTAGAATATTTGACTTTTATCCTTTCCCCTTGTTACATTGTAGATAGAACTCTAATTATTTAGTTTCATCATCGAAGATACAAAAAACACAAAACCTTACCTTTTTGTCTTCCCCTACTTTGGACAAAAACAAGTTAAAGCAACACAGTAGGCTTTTTCTTTTTTTCCCGTTCAATGTCCTTCCTTTGAAGAATTCTCCTCCAAACAGCTAGCTTGGACACATCATCTTGCAGAAATGGTGTCTATAAATCACATTCATTATATGAACTGAGTAGTGTGGAAGTGGCTATTGTTTGTTTCCTTGCTTTTGTCAGGAAATTTACCTTGGGTCATCTAGACTACTCTATGCTGCTGTAAGTTCCTCTATTATCATCGTACACCTTCACTCAACTTCTTGACCCATAGAAGTCAGTGGGTGACTTATTCTTCCTGAGATCCATTCCCAAAAAACATGTAATTGTTTTCTTTTCTTAATTCAATCTGAACTTGTCTTTTGTGTCATTATCTGCTCTTAGAATAACACTCTACGGCTCTAGTGTCTGAGTAGGCTGATGTGGAGCAGAGAGCTTGTTATTAGGAGGATCATCCATATTTAGAGAAATAAAGAACAAAATGAATTGAAAATTTATAATAGAGGGTAGATTCTGGAGCCAAGGATTTTATTTCTGGTATTGGATCAGATAATTTGTTCTAACAGAAGTTCAAAGCTTCAAGGATGGATGTTTGATTTCCCATAACCATGTGAAAAATCTTTTTATCTTTTAAGAGTTGTTTCTCGTTCACCTAGTAGAGGTTTCAACATTAAATCATTATGCTAATACTTGAATGATGCTCATATATTAGATATATGTTTCAATTATATAAGTATTATACTTCACCAACATCATATCTTGCTCCTTCATTTGCAGAATCTGTCAGGAAAATAAGAAAACCAAAGCCATGGAGACACACAGAACCAATAACAAGAGCTCAGCTTCTAAAAATGCGTGAAGAATTCTGGGACACTGCACCACACTATGGGGGAAAAAAAGGTAAATCCCTTGATAACTTCTATTAGCTTCTGCAAGTTTCTGGAACCACTGGTTCAATAGAGCTGGATGTGTGATCAGGTTGTACTATGGGCCTCTGCATTCTTATTTGAGTAACCAGTTAGTGTGGGCCAATTGTTAACTCTAGAGTACACATGTGATGATGTCTGACAATCTATCTGGGAGCTTGGGCAGAGTGGATTGACAGTATAATGATGTGTAGGAAGTAGGAACTGCTCTAGTGTGGATCAAAAGAATCGTTCTTGATGATTAGTTGCTCTACTTTAGGAGGGTTTATGTTATGCATTCAAGTTTTCTCATAACGATCTGGCTCCAGTAGTTTGTAACTTGGATATCTCTTTCACAAAAAGAAGTGACCTTGAATTTTTGAAAATCAAGTGGAGCGTGATATCTTTTAACATCCATGCTACATCTAATTTTAAGCTGTGTGCCCTTTTTTTCGGCTGTTCTTAGATATCATGATAATTTCAGAAAGTAAATTCCCAATTTGCTCCTGAGCAATAACAACCTTAATGATCCTTGAAAATGTTTCGGTGCTATCAGTTTGGCAAAGTTGCTGCAGGAAGAAACATGTCAATCTCCAGATCTGTTTTGCCTTTCCATATTGTTGGAAAGAAAGCTGCATTAGTGTCTTTTAAATAGTTCATTAAAACAAGGCACATTAGTTGAGTGAATAAGTAATTTTAACTTCTAATTAAGTGGATAAGTAACTTTCTTTTTTAAAAAAAATGGGAAGCTAATGTCAACTTTCAAAAGAACCCTCTCTTTGCAGCAATGTCAAGGAGCTTGTGTCGGGAAAGCTCTCTTGTAAATCTCACTGTTAATTAGTTTTCAGATCTTCATAGTTGAGATACCATTCAGTGCGTAGAACCTCATATTTTCACGTCGTGAATAATAGGACATCAGACATATGATTTCTTTTTCTGGTGGTTATTGTTAAAATTCAGAGATTGAAATGTATTAACTGATGGTCAGGTAATAGTATACTTGTAGTAGGGAAGGTCCATACTCCAACAGTTTAGTATATGAAAATCTTTTTTCTTACAACATATCACTCCATTTTCAGAGATCTGGGATGCGCTACGTGCTGCTGCCGAGGCAGAAATAGGCCTTGCACAAACAATCGTGAACAGTGCTGGGATAATTGTTCAAACCACTGATCTAACAGTCTGCTATGATGAGAGAGGTTTGTAGTACACGTCGCTTAACACCTTCAACTTCCATTCCTGAGAATCTTAGTTAATGTTGATTCTTCTAATGCAGGTGCCAAGTATGACTTGCCTCTATACGTTTTGAGCGAACCAACAAATCTGACTGGTGAAAACTGAGAAGGCAATATAATCAAGTGTTCATGCTTCATTGAGACTGTAAATGCTGTAAATTGCTCTCACAAGTCATTTCTCTCAAACATTCATTTCGTTTTATGCATTATGGTCCTGTTTCACGACATCAAGAATCGTCTGTCGCAGCAGCAACATGCACCATGATATTCTTTTGGACATAATATCTCTAGCCTGAAGAGG</genome_strand>
        <mrna_strand>GAAAGGAAGTTTCTAATTTTGCCCAAAATCGGTAGAAAAAAAAAAGTAGTAGTATATATATAGCTGTCATTGGGAGAGTTGTGAGCACGCAATAATACTCCCTCTAAAGAAGCACTAAATTTTCCCTTTTTGCATATTAAACGCTCTCCATCTAACATTTTGTTCAGTTGTCAATAATTGACTGGGAAATTGATTCCCGAGATCGGCAACTGGTGTTCTTCAATACTCAATTTTCGTGCAACTCTGTTAAAATGGGTTGCGTTGGATCCTCACGTACCAAAGGAGATG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTGTCAGGAAAATAAGAAAACCAAAGCCATGGAGACACACAGAACCAATAACAAGAGCTCAGCTTCTAAAAATGCGTGAAGAATTCTGGGACACTGCACCACACTATGGGGGAAAAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCTGGGATGCGCTACGTGCTGCTGCCGAGGCAGAAATAGGCCTTGCACAAACAATCGTGAACAGTGCTGGGATAATTGTTCAAACCACTGATCTAACAGTCTGCTATGATGAGAGAG.............................................................................GTGCCAAGTATGACTTGCCTCTATACGTTTTGAGCGAACCAACAAATCTGACTGGTGAAAACTGAGAAGGCAATATAATCAAGTGTTCATGCTTCATTGAGACTGTAAATGCTGTAAATTGCTCTCACAAGTCATTTCTCTCAAACATTCATTTCGTTTTATGCATTATGGTCCTGTTTCACGACATCAAGAATCGTCTGTCGCAGCAGCAACATGCACCATGATATTCTTTTGGACATAATATCTCTAGCCTGAANAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U597780" ref_strand="+" ref_description="SGN-U597780 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157354697|emb|CAO48015.1| (e_value=1e-46) unnamed; (*ATH) AT4G18820.1 (e_value=3e-34) | Symbol: None | expressed protein | chr4:10330382-10334279 FORWARD | Aliases: F28A21.230, F28A21_230; ">
      <seq>ggaggaagttctttcgacgccaagcaatatcaaaacaagatatggaaaaactgcgtcaagctctgaaaacactatctgaagctgaaaagcagctgagaatgtcaaatgacagacttacctggcttacagctgcattgctgcaactcgctccagatcagcagtatatgttgcccaattcctcagctgacactagttttattcaaagtccactagacttgaataatgcagggggaacagaaagacccaggaaaagcaatgtcgagcatgctgacatgctacacaaaaacagagggttcccatcaaaaagtagagtagaaaactttcaagctggatgttctagtgatatttactccgacgccaggatgaaaggggttcacattggtgggaaagggcataatggaactggagaatttactcaaaaagcttatggcgtctctagtgataaaaatagaacaagtagtggtcaggttacaggtaagttgcaccaggatattgaagaaatgtggttagaagtgcttgaaaatatcgaaataaatggcttaaaagagtttatgtatcgtgaagggaagcttacctcagtcagctttggagcagctccanctgtgcagttactgttcagctcacatataacaaaatccaaagtanagaaatttnngggtcatattttacaagcttttgagtctgntctngggtcccccgtganatanaaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="+" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="73600" stop="76586"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73900" g_stop="73926" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73927" i_stop="74250" i_length="324">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74251" g_stop="74817" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="594" r_length="567" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="74818" i_stop="76167" i_length="1350">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76168" g_stop="76286" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="595" r_stop="712" r_length="118" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="+" ref_id="SGN-U597780" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U597780" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73900" e_stop="73926"/>
          <exon e_start="74251" e_stop="74817"/>
          <exon e_start="76168" e_stop="76286"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGGAAGTTCTTTCGACGCCAAGCAAGTAAGTGATCTATAATATGGTTATTCCATAATAAATGAGTTATTATAGATCCATATGATATTGGATAAACTACTGGGTAATAGCTCACAATAGCCAGACAATACATATTGATTTCCCTTAATAAGTCTTCCAACTAAAAGCTAAATCAGCTTTGCTTGTGAAACAATTTGCAAAGAGAATCTTGTATCACATCTTCCAATTTAACTAATTGCCTTCTCATTCTCTTTCAATATTCTCACAGCCACAAGAACTTGAACTATATATGCCATTTTAATCATATTTTTCTCCAAGTTCAACTCTTACTTTCCTTTTCTTTGGTTGCAGTATCAAAACAAGATATGGAAAAACTGCGTCAAGCTCTGAAAACACTATCTGAAGCTGAAAAGCAGCTGAGAATGTCAAATGACAGACTTACCTGGCTTACAGCTGCATTGCTGCAACTCGCTCCAGATCAGCAGTATATGTTGCCCAATTCCTCAGCTGACACTAGTTTTATTCAAAGTCCACTAGACTTGAATAATGCAGGGGGAACAGAAAGACCCAGGAAAAGCAATGTCGAGCATGCTGACATGCTACACAAAAACAGAGGGTTCCCATCAAAAAGTAGAGTAGAAAACTTTCAAGCTGGATGTTCTAGTGATATTTACTCCGACGCCAGGATGAAAGGGGTTCACATTGGTGGGAAAGGGCATAATGGAACTGGAGAATTTACTCAAAAAGCTTATGGCGTCTCTAGTGATAAAAATAGAACAAGTAGTGGTCAGGTTACAGGTAAGTTGCACCAGGATATTGAAGAAATGTGGTTAGAAGTGCTTGAAAATATCGAAATAAATGGCTTAAAAGAGTTTATGTATCGTGAAGGGAAGCTTACCTCAGTCAGCTTTGGAGCAGGTACAATTCATTTAGTCTCTTACAAAAATCCTTAGCTATGTCTTATGGTCATGACTAGTGAACTGTTCTTAATTATTTATATTATTATGTAGTAAGGTCATGAGTAGTGAGTTTTGCACACTTATATTCAATTTTAGGCATTTCAACTGCATGTTTAATCAGCAGGTGAAAACCAGAAGAGTTTTGTCCGCCAGATCAGTTTAACACAAAATACTTTTTTAATTTTAAGTAAACCAATTAATGTTAGCTTAAAATAGATCTTCATTATTTTAAATTATTACAGACCTGCACTATTTTAAGGTTATAGAATAGATTCAAGAGAAAAGCTTCCTTTCTCTTAATCAGGAATCAATTTGGGGTCAGGCTTTCTCCGAATGGCCTGGTTATTCAAGTTTCTTGGATGTTATCTTTTATTTCCTTGTCAATATAGATCATGGACATATATTTCTAAATGTCCAGGGTGTTAAACTTGCTGCTTTTTTTTGTGAAGAAGGTGGAATTGAACGGAACCTAGTAATACTAAGAGAGCACGTTTTGACAGGATTATATGGTTTGAAGTTTGAACAGTTCATTTCAAAGACTTGTTGCAGCAAGTAGTAGCCAGGGGCAGACGTAGAGTGTGAGTTATGATTTCATCTGAACACCAATAGCTTTGGCTTGGAACTTTTATGTGGTAAAAATCACAAAATCAAGTACAAATAAGTAAGTAGCGAGCCCTGTCAATCAAATAAGATGTGATAGAACCCCAAACTCGAACCCATAAAGTTCAAATCCTAGATCCGCCTCTAATGGTAGCAGGCTGCTCACTGCTGATTGCAAGAGTGTTTTTAGTGCTTCAACGCATGAGAAATGACTACTTTCTTTATTCTATTATTCTTTTGAATCTCTCTCTGTATCTGTTCACCTCTTGGTTACCTGCTTAATTTTACATCTGTGTTACAAATTTAATGCATTGTAAGCTTTCTGAGTATTACTCTTGCACTTTGTAGCTTGGTTTCCTTTGTAATTCCATATTCATTCTGTTGTAAGCTTCCTTTTCGATTGACATCTTTATTTTAGTTTTGGACTTCCTATAACTTAACATACTATGAACATAAAATTCCATTCTGACTTGTAGCGATACTGTGTCTTCTGTAATATGAGTGTTATTCTAGAGTTGCTTATGTTTCCATATGTGCCCCATGACTTGTGAAAGAGGGAGGGAGGGACTCTATTGAAAAGTATGTTTCATGTACTGTGCATGTGTCCCGTCGTTTCCCTTTTTTGTTGGGACAACTATATAATACTGATCTGTGGGGTTTCATTTGTAGATGTTATTCATGCTCATCGGATTTGTTAATTTCTTTGCAGCTCCAACTGTGCAGTTACTGTTCAGCTCACATATAACAAAATCCAAAGTAGAGAAATTTAGGGGTCATATTTTACAAGCTTTTGAGTCTGTTCTTGGGTCCCCCGTGACAATAGAAATC</genome_strand>
        <mrna_strand>GGAGGAAGTTCTTTCGACGCCAAGCAA....................................................................................................................................................................................................................................................................................................................................TATCAAAACAAGATATGGAAAAACTGCGTCAAGCTCTGAAAACACTATCTGAAGCTGAAAAGCAGCTGAGAATGTCAAATGACAGACTTACCTGGCTTACAGCTGCATTGCTGCAACTCGCTCCAGATCAGCAGTATATGTTGCCCAATTCCTCAGCTGACACTAGTTTTATTCAAAGTCCACTAGACTTGAATAATGCAGGGGGAACAGAAAGACCCAGGAAAAGCAATGTCGAGCATGCTGACATGCTACACAAAAACAGAGGGTTCCCATCAAAAAGTAGAGTAGAAAACTTTCAAGCTGGATGTTCTAGTGATATTTACTCCGACGCCAGGATGAAAGGGGTTCACATTGGTGGGAAAGGGCATAATGGAACTGGAGAATTTACTCAAAAAGCTTATGGCGTCTCTAGTGATAAAAATAGAACAAGTAGTGGTCAGGTTACAGGTAAGTTGCACCAGGATATTGAAGAAATGTGGTTAGAAGTGCTTGAAAATATCGAAATAAATGGCTTAAAAGAGTTTATGTATCGTGAAGGGAAGCTTACCTCAGTCAGCTTTGGAGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCANCTGTGCAGTTACTGTTCAGCTCACATATAACAAAATCCAAAGTANAGAAATTTNNGGGTCATATTTTACAAGCTTTTGAGTCTGNTCTNGGGTCCCCCGTGA-NATANAAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U598275" ref_strand="+" ref_description="SGN-U598275 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>cttgggtcccccgtgacaatagaaatcagatgtgaatccgggaaagatggcagggctggaccaattgtgttgtcagcacctcatggtgtatctcatataggtacaaatcctggcattcatggtaatggggtgagaatggcaggtcctgatgaaatcagcagggcacaagtgaatgatagcgaaggtttagcatttagaaagctcgactcgagaggaataggtggtagcgagatagttgaagaggaagcttctccaagagaatcaaaacacaatgatcagatcgacaacaatacacaatttgataggcggaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="+" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="75960" stop="76873"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76260" g_stop="76573" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="314" r_length="314" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="+" ref_id="SGN-U598275" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>314</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U598275" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76260" e_stop="76573"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGGGTCCCCCGTGACAATAGAAATCAGATGTGAATCCGGGAAAGATGGCAGGGCTGGACCAATTGTGTTGTCAGCACCTCATGGTGTATCTCATATAGGTACAAATCCTGGCATTCATGGTAATGGGGTGAGAATGGCAGGTCCTGATGAAATCAGCAGGGCACAAGTGAATGATAGCGAAGGTTTAGCATTTAGAAAGCTCGACTCGAGAGGAATAGGTGGTAGCGAGATAGTTGAAGAGGAAGCTTCTCCAAGAGAATCAAAACACAATGATCAGATCGACAACAATACACAATTTGATAGGCGGAATTT</genome_strand>
        <mrna_strand>CTTGGGTCCCCCGTGACAATAGAAATCAGATGTGAATCCGGGAAAGATGGCAGGGCTGGACCAATTGTGTTGTCAGCACCTCATGGTGTATCTCATATAGGTACAAATCCTGGCATTCATGGTAATGGGGTGAGAATGGCAGGTCCTGATGAAATCAGCAGGGCACAAGTGAATGATAGCGAAGGTTTAGCATTTAGAAAGCTCGACTCGAGAGGAATAGGTGGTAGCGAGATAGTTGAAGAGGAAGCTTCTCCAAGAGAATCAAAACACAATGATCAGATCGACAACAATACACAATTTGATAGGCGGAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U603283" ref_strand="+" ref_description="SGN-U603283 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157354697|emb|CAO48015.1| (e_value=2e-25) unnamed; (*ATH) AT4G18820.1 (e_value=3e-24) | Symbol: None | expressed protein | chr4:10330382-10334279 FORWARD | Aliases: F28A21.230, F28A21_230; ">
      <seq>cggcaaagtagctggtcaaaacgcaaggctgtttctatcgctgataagcttgaacaagagaatttgagattagaagcaaggtcaaggagcttgctttgttggaaggctagaagagtcacccgccgacagctttcgcgattgaaaacaagaagtaggaggccaaagagcttactgaggttcgtttcttgcggaaaatgtctctctggtaggtctccaaggtagcagtgaaatgtatcagattaatttccagttttagttctactatttgttcaacgtcagtcaatctttgtttagaaggtcaattttattttttccaataataaatggaaggtgcaacattattaatatatctttttctagtttagcaattttctcttttagatgtctacagtagctctcatgtactacaacactattctacattcttataaattattgggaattcatttttcctcttttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="+" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="76431" stop="79022"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76731" g_stop="76795" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76796" i_stop="77348" i_length="553">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77349" g_stop="77412" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="129" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77413" i_stop="78389" i_length="977">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78390" g_stop="78722" g_length="333"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="462" r_length="333" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="+" ref_id="SGN-U603283" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U603283" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76731" e_stop="76795"/>
          <exon e_start="77349" e_stop="77412"/>
          <exon e_start="78390" e_stop="78722"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGCAAAGTAGCTGGTCAAAACGCAAGGCTGTTTCTATCGCTGATAAGCTTGAACAAGAGAATTTGTATGTACCTCTTTACCCATCCTTCTTGTATTACCACATCATATATCAGATTGTATATGTGTCTCAGATGTGTAATCATTTGCTTGAAGAGACAAATAATATACCATCAAAACGTATGTCTTTAAGTTATGTTTTGATTTAATATAGCAGTACAGAACTACAGATGCAGAAAAGATTAGAGAATGCCCTACTGTTATAGAGTGGATATTTTGTATTAAATGAAATGTGGAGCACAAGCAGTCCATTCATCCTTCACTTGTTGGTGGATGGAATGATACACATGCTAGAAAAATACACTCCATCCAGATTAGTGTTGTCCTGTCGTCAATTATCAGCTAAAGGACCCCATAGAAAATGTTACAACCTTTAAGTATAACATCAGGACATATGGCACCACTTTACTTTTTGTTGGAATGAGTATTCTTATATTGCATAGTTCTTATAGTAGGTATAGCTATCTTCATTTGATATTCAGTTGTTCTTGGAAACACACAAGTGATCCTCTTTTAATTGGACTATTCTCATGTAGTAATGTGATCTTTCTTCTCTGCAGGAGATTAGAAGCAAGGTCAAGGAGCTTGCTTTGTTGGAAGGCTAGAAGAGTCACCCGCCGACAGGTAAACAGATTCAAACATCTATTTTCTTTTTCAATTTATTCAAGAGTCCTTTTAATGTTTTCTACACATCTTAGACTTTTCAAGTTGTATGTCAACGTAGTTGCATTCATCCGTTAATTGGAATTTGACATACTGCACTAAGGTGCAAGTATAGGCAAGTATGAAGATGTTTCAGTTCCTAACATATCAAATCAAGATGCTTCCTTGCCGGCTGCCTTGTCTTACATTTAGCTATATGATGATGGACCATGAGCAAAAATATCTTACGCACCCAAAAAGAAAAAAATAGAGATTAGCAAAAGAGTATAGTGGGTTGTATGCACAAGTTGGGCATCGATGGAATACCTCGACTATTCCACCAGGTGCCTCTATCCACAGGTATCGAATAACTTTAAACACCAAGGCTTAGGTGGATGGAAAGAAATTGCCTGGTGTTTTTTGCACTTGAGACTTCGTGGTTCTCCTCTCATTTCATTGACCATTAAATTAAACCGCGTCCTTGGATGCAAATCCAGTTCAAAGCTGGAAATAGCGAATTAACTGACCTATTCTATGGCTTCCAGAGTATTCTAGGACAATCGCACGTGATTCGTAGTTCCCTCTGGGCTCTGGCAGTGCATGAGATGTTTAAACTATATAATGCTACTGTCAATTCAGCCAATTTTTTTTGTAAAAGCTATCACCATTCCGAATATAAAAGCTCTTTGAGGAACATCAGACTATAGCACAGTTTTGATTACTGACACTGAGGCACGATGCTGAAGGAGAGACTTATTTATCTATGGGAAAATACTCTTTAGTGGAGTAAATGGGATATAAATCCTTTCACTTGTAGCTTCTTATTTCTTTTGTTTCATGATTTAGAAGGCTTTACACCAACTTGTTACAGGATATATTACTGACTTATTATCAAATTTAGTAGCCCTACTGATTTATTTGAAACTATCAGTTATAACAGAATTGTTTATCGCGTGCAGCTTTCGCGATTGAAAACAAGAAGTAGGAGGCCAAAGAGCTTACTGAGGTTCGTTTCTTGCGGAAAATGTCTCTCTGGTAGGTCTCCAAGGTAGCAGTGAAATGTATCAGATTAATTTCCAGTTTTAGTTCTACTATTTGTTCAACGTCAGTCAATCTTTGTTTAGAAGGTCAATTTTATTTTTTCCAATAATAAATGGAAGGTGCAACATTATTAATATATCTTTTTCTAGTTTAGCAATTTTCTCTTTTAGATGTCTACAGTAGCTCTCATGTACTACAACACTATTCTACATTCTTATAAATTATTGGGAATTCATTTTTCCTCTTTTACT</genome_strand>
        <mrna_strand>CGGCAAAGTAGCTGGTCAAAACGCAAGGCTGTTTCTATCGCTGATAAGCTTGAACAAGAGAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATTAGAAGCAAGGTCAAGGAGCTTGCTTTGTTGGAAGGCTAGAAGAGTCACCCGCCGACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCGCGATTGAAAACAAGAAGTAGGAGGCCAAAGAGCTTACTGAGGTTCGTTTCTTGCGGAAAATGTCTCTCTGGTAGGTCTCCAAGGTAGCAGTGAAATGTATCAGATTAATTTCCAGTTTTAGTTCTACTATTTGTTCAACGTCAGTCAATCTTTGTTTAGAAGGTCAATTTTATTTTTTCCAATAATAAATGGAAGGTGCAACATTATTAATATATCTTTTTCTAGTTTAGCAATTTTCTCTTTTAGATGTCTACAGTAGCTCTCATGTACTACAACACTATTCTACATTCTTATAAATTATTGGGAATTCATTTTTCCTCTTTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U598464" ref_strand="+" ref_description="SGN-U598464 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|118490015|gb|ABK96801.1| (e_value=9e-43) ACRE; (*ATH) AT1G29340.1 (e_value=4e-23)  Symbol: None | armadillo/beta-catenin repeat family protein / U-box domain-containing protein, contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain | chr1:10264381-10266804 FORWARD | Aliases: F15D2.34, F... ; (*SWP) sp|Q9C7R6|PUB17_ARATH (e_value=3e-22) U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17; ">
      <seq>tatagaatatacctatatttttccttttttggttctcttgtcaatccatacaagttttttgtacaaataataaatacccatttcgttcttggtcttaaattcaaacctttcttgatagttttttatcagaaaggtagaatcttggagttgtttttacagttttttttttggtatacccatatagatatctcactgaaatattgcaaaaataaaatcaanaaagcatttttcantgggaaacannaaaagggctggagttgatttttcaagattttggtgaaattgggtgtgggaaattgatggcatctgctgcaattttctcatcgttganaaaacaaaggtcgccnacnctggaagcgttcttggcgccggtggatctgacanatgttgggttgttgcaaactttaacggcgttatcttctganctgatttctgcatattcaggtaaaaggctgccgttttatcancggaanaattgtanntctttgttaaggaaaattcaagtattttctgttctcttggagtgtcttcttgagaataaaaagaacagaagtagtggttcttcanatttgccgtttacagcttttttgtgcttcaaggagttgtatttattgctttaccggtcgaaaatcttgcttgannattgctcttattcnagtaagttgtggctgttgctacaaaaccattcgatttcnggtcatttccangatttgaaccannaaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="+" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="88058" stop="89382"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88358" g_stop="89082" g_length="725"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="725" r_length="725" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="+" ref_id="SGN-U598464" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>725</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U598464" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88358" e_stop="89082"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATAGAATATACCTATATTTTTCCTTTTTTGGTTCTCTTGTCAATCCATACAAGTTTTTTGTACAAATAATAAATACCCATTTCGTTCTTGGTCTTAAATTCAAACCTTTCTTGATAGTTTTTTATCAGAAAGGTAGAATCTTGGAGTTGTTTTTACAGTTTTTTTTTTGGTATACCCATATAGATATCTCACTGAAATATTGCAAAAATAAGATCAAGAAAGCATTTTTCAGTGGGAAACAAGAAAAGGGCTGGAGTTGATTTTTCAAGATTTTGGTGAAATTGGGTGTGGGAAATTGATGGCATCTGCTGCAATTTTCTCATCGTTGAGAAGACAAAGGTCGCCGACACTGGAAGCGTTCTTGGCGCCGGTGGATCTGACAGATGTTGGGTTGTTGCAAACTTTAACGGCGTTATCTTCTGAGCTGATTTCTGCATATTCAGGTAAAAGGCTGCCGTTTTATCAGCGGAAGAATTGTAAGTCTTTGTTAAGGAAAATTCAAGTATTTTCTGTTCTCTTGGAGTGTCTTCTTGAGAATAAAAAGAACAGAAGTAGTGGTTCTTCAGATTTGCCGTTTACAGCTTTTTTGTGCTTCAAGGAGTTGTATTTATTGCTTTACCGGTCGAAAATCTTGCTTGATTATTGCTCTTATTCAAGTAAGTTGTGGCTGTTGCTACAAAACCATTCGATTTCAGGTCATTTCCATGATTTGAACCAAGAAATC</genome_strand>
        <mrna_strand>TATAGAATATACCTATATTTTTCCTTTTTTGGTTCTCTTGTCAATCCATACAAGTTTTTTGTACAAATAATAAATACCCATTTCGTTCTTGGTCTTAAATTCAAACCTTTCTTGATAGTTTTTTATCAGAAAGGTAGAATCTTGGAGTTGTTTTTACAGTTTTTTTTTTGGTATACCCATATAGATATCTCACTGAAATATTGCAAAAATAAAATCAANAAAGCATTTTTCANTGGGAAACANNAAAAGGGCTGGAGTTGATTTTTCAAGATTTTGGTGAAATTGGGTGTGGGAAATTGATGGCATCTGCTGCAATTTTCTCATCGTTGANAAAACAAAGGTCGCCNACNCTGGAAGCGTTCTTGGCGCCGGTGGATCTGACANATGTTGGGTTGTTGCAAACTTTAACGGCGTTATCTTCTGANCTGATTTCTGCATATTCAGGTAAAAGGCTGCCGTTTTATCANCGGAANAATTGTANNTCTTTGTTAAGGAAAATTCAAGTATTTTCTGTTCTCTTGGAGTGTCTTCTTGAGAATAAAAAGAACAGAAGTAGTGGTTCTTCANATTTGCCGTTTACAGCTTTTTTGTGCTTCAAGGAGTTGTATTTATTGCTTTACCGGTCGAAAATCTTGCTTGANNATTGCTCTTATTCNAGTAAGTTGTGGCTGTTGCTACAAAACCATTCGATTTCNGGTCATTTCCANGATTTGAACCANNAAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U575342" ref_strand="+" ref_description="SGN-U575342 Tomato 200607#2 [11 ESTs aligned] (*GB) gi|118490015|gb|ABK96801.1| (e_value=0) ACRE; (*ATH) AT1G29340.1 (e_value=1e-177)  Symbol: None | armadillo/beta-catenin repeat family protein / U-box domain-containing protein, contains Pfam domain, PF00514: Armadillo/beta-catenin-like repeats and Pfam, PF04564: U-box domain | chr1:10264381-10266804 FORWARD | Aliases: F15D2.34, F... ; (*SWP) sp|Q9C7R6|PUB17_ARATH (e_value=1e-176) U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17; ">
      <seq>ggttgaaattgttttctttcttgaatgagtttgagaatggtggtgttcctgactatgctcagttgtactctttttttgtggaaaaattggggattcgtaatcctaggagttgcagagttgagattgagtttttggaggagcagattgtgaaccatgaaggagatattgagcccacatcctcagttctcaacgggtttgtggcgttgatgcgatactgcaggtttttgctatttggctttgaagaggatgatatggggttgagattgggtaagcataagaagccgaagagagggctgattagtcaagagattgcagagacattcatttctgtaccaaaggacttctggtgtccgatatcgttggatttgatgagggatccagttattgtggcaacagggcagacatatgatcgagcttctatatcgaggtggatggaggagggtcactgtacttgcccaaagacagggcagttgcttgatcatacccggcttgtgccaaacagggctcttaggaatttgattatgcattggtgtgctgctcgcaaaattccctatgaccctctggagagtggggatccatgtgttgaatgttttccatcagcttcacctagcagggctgcactagaagctaataaagccacagcagctcttctgattaagcagctagagagtgggacgcagattgcaaaaactattgctgctcaggagataagacttttagctaaaactggtaaggagaatcgtgcatacatagctgaggctggtgcaatcccacatttgaagaatttgctttcatctccagatgctgtggcacaagaaaattccgtcactgcaatgcttaacttatcgatttttgataagaataaaggccgaattattgatgaagtagggtgtctggctttgatagttggagttttgagatttgggcacaccacagaggcacgggaaaatgctgcagcaacattattcagtctgtcagctgttcatgactataagaggcaaatagcaaaagaagatggggcagtcgaggccttagcgggtctgttgcgagaaggttctcccagagggaagaaagatgcagtaactgctctatttaatttatccacccacacagataattgtgcgaggatgatagagtctggagctgttactgctctagttggagctttgggaagtgaaggtgttgctgaagaagctgctggtgcattggcgctgattgttaggcagcaagttggtgctacagctgttggcaatgaggaaatggcagtagcagggctcattgcaatgatgcgatgtgggacaccaagagggaaggagaatgctgttgctgcattacttgaattatgcccccgtggtggagcagctgctactgagagggtcttgaaggcgccgtcattagcaagtttacttcagacgttgctctttacaggaacaaagcgcgcaaggaggaaagcagcatcgcttgctagagtattccaacggtgtgagcatgcagcagttcattatagtgggtttggtgtaggatatgcatttgctggaaactcagctgctgctagggattcaacttttcctggtgatgtctcagtgtccatgtccatttcagttccagtattataggggtacttaccaccattcatcttttgttcttagttttacttgtaatattcaaaaattctttcattgaaatataaacgcgacaaagaaagagagaaatcataggaataccacaaaattcatgtgttcttagcattttgcagaaaacagtgcctccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0011K05-p7ZAm/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0011K05.1" temp_strand="+" temp_description="C02SLe0011K05.1  AC215445.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0011K05 sequenced_by:kribb upload_account_name:korea">
        <position start="88916" stop="91284"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89216" g_stop="90986" g_length="1771"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1771" r_length="1771" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0011K05.1" gen_strand="+" ref_id="SGN-U575342" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1771</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0011K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U575342" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89216" e_stop="90986"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTGAAATTGTTTTCTTTCTTGAATGAGTTTGAGAATGGTGGTGTTCCTGACTATGCTCAGTTGTACTCTTTTTTTGTGGAAAAATTGGGGATTTGTAATCCTAGGAGTTGCAGAGTTGAGATTGAGTTTTTGGAGGAGCAGATTGTGAACCATGAAGGAGATATTGAGCCCACATCCTCAGTTCTCAACGGGTTTGTGGCGTTGATGCGATACTGCAGGTTTTTGCTATTTGGCTTTGAAGAGGATGATATGGGGTTGAGATTGGGTAAGCATAAGAAGCCGAAGAGAGGGCTGATTAGTCAAGAGATTGCAGAGACATTCATTTCTGTACCAAAGGACTTCTGTTGTCCGATATCGTTGGATTTGATGAGGGATCCAGTTATTGTGGCAACAGGGCAGACATATGATCGAGCTTCTATATCGAGGTGGATGGAGGAGGGTCACTGTACTTGCCCAAAGACAGGGCAGTTGCTTGATCATACCCGGCTTGTGCCAAACAGGGCTCTTAGGAATTTGATTATGCATTGGTGTGCTGCTCGCAAAATTCCCTATGACCCTCTGGAGAGTGGGGATCCATGTGTTGAATGTTTTCCATCAGCTTCACCTAGCAGGGCTGCACTAGAAGCTAATAAAGCCACAGCAGCTCTTCTGATTAAGCAGCTAGAGAGTGGGACGCAGATTGCAAAAACTATTGCTGCTCAGGAGATAAGACTTTTAGCTAAAACTGGTAAGGAGAATCGTGCATACATAGCTGAGGCTGGTGCAATCCCACATTTGAAGAATTTGCTTTCATCTCCAGATGCTGTGGCACAAGAAAATTCCGTCACTGCAATGCTTAACTTATCGATTTTTGATAAGAATAAAGGCCGAATTATTGATGAAGTAGGGTGTCTGGCTTTGATAGTTGGAGTTTTGAGATTTGGGCACACCACAGAGGCACGGGAAAATGCTGCAGCAACATTATTCAGTCTGTCAGCTGTTCATGACTATAAGAGGCAAATAGCAAAAGAAGATGGGGCAGTCGAGGCCTTAGCGGGTCTGTTGCGAGAAGGTTCTCCCAGAGGGAAGAAAGATGCAGTAACTGCTCTATTTAATTTATCCACCCACACAGATAATTGTGCGAGGATGATAGAGTCTGGAGCTGTTACTGCTCTAGTTGGAGCTTTGGGAAGTGAAGGTGTTGCTGAAGAAGCTGCTGGTGCATTGGCGCTGATTGTTAGGCAGCAAGTTGGTGCTACAGCTGTTGGCAATGAGGAAATGGCAGTAGCAGGGCTCATTGCAATGATGCGATGTGGGACACCAAGAGGGAAGGAGAATGCTGTTGCTGCATTACTTGAATTATGCCGCGGTGGTGGAGCAGCTGCTACTGAGAGGGTCTTGAAGGCGCCGTCATTAGCAAGTTTACTTCAGACGTTGCTCTTTACAGGAACAAAGCGCGCAAGGAGGAAAGCAGCATCGCTTGCTAGAGTATTCCAACGGTGTGAGCATGCAGCAGTTCATTATAGTGGGTTTGGTGTAGGATATGCATTTGCTGGAAACTCAGCTGCTGCTAGGGATTCAACTTTTCCTGGTGATGTCTCAGTGTCCATGTCCATTTCAGTTCCAGTATTATAGGGGTACTTACCACCATTCATCTTTTGTTCTTAGTTTTACTTGTAATATTCAAAAATTCTTTCATTGAAATATAAACGCGACAAAGAAAGAGAGAAATCATAGGAATACCACAAAATTCATGTGTTCTTAGCATTTTGCAGAATACAGTGTTTCAA</genome_strand>
        <mrna_strand>GGTTGAAATTGTTTTCTTTCTTGAATGAGTTTGAGAATGGTGGTGTTCCTGACTATGCTCAGTTGTACTCTTTTTTTGTGGAAAAATTGGGGATTCGTAATCCTAGGAGTTGCAGAGTTGAGATTGAGTTTTTGGAGGAGCAGATTGTGAACCATGAAGGAGATATTGAGCCCACATCCTCAGTTCTCAACGGGTTTGTGGCGTTGATGCGATACTGCAGGTTTTTGCTATTTGGCTTTGAAGAGGATGATATGGGGTTGAGATTGGGTAAGCATAAGAAGCCGAAGAGAGGGCTGATTAGTCAAGAGATTGCAGAGACATTCATTTCTGTACCAAAGGACTTCTGGTGTCCGATATCGTTGGATTTGATGAGGGATCCAGTTATTGTGGCAACAGGGCAGACATATGATCGAGCTTCTATATCGAGGTGGATGGAGGAGGGTCACTGTACTTGCCCAAAGACAGGGCAGTTGCTTGATCATACCCGGCTTGTGCCAAACAGGGCTCTTAGGAATTTGATTATGCATTGGTGTGCTGCTCGCAAAATTCCCTATGACCCTCTGGAGAGTGGGGATCCATGTGTTGAATGTTTTCCATCAGCTTCACCTAGCAGGGCTGCACTAGAAGCTAATAAAGCCACAGCAGCTCTTCTGATTAAGCAGCTAGAGAGTGGGACGCAGATTGCAAAAACTATTGCTGCTCAGGAGATAAGACTTTTAGCTAAAACTGGTAAGGAGAATCGTGCATACATAGCTGAGGCTGGTGCAATCCCACATTTGAAGAATTTGCTTTCATCTCCAGATGCTGTGGCACAAGAAAATTCCGTCACTGCAATGCTTAACTTATCGATTTTTGATAAGAATAAAGGCCGAATTATTGATGAAGTAGGGTGTCTGGCTTTGATAGTTGGAGTTTTGAGATTTGGGCACACCACAGAGGCACGGGAAAATGCTGCAGCAACATTATTCAGTCTGTCAGCTGTTCATGACTATAAGAGGCAAATAGCAAAAGAAGATGGGGCAGTCGAGGCCTTAGCGGGTCTGTTGCGAGAAGGTTCTCCCAGAGGGAAGAAAGATGCAGTAACTGCTCTATTTAATTTATCCACCCACACAGATAATTGTGCGAGGATGATAGAGTCTGGAGCTGTTACTGCTCTAGTTGGAGCTTTGGGAAGTGAAGGTGTTGCTGAAGAAGCTGCTGGTGCATTGGCGCTGATTGTTAGGCAGCAAGTTGGTGCTACAGCTGTTGGCAATGAGGAAATGGCAGTAGCAGGGCTCATTGCAATGATGCGATGTGGGACACCAAGAGGGAAGGAGAATGCTGTTGCTGCATTACTTGAATTATGCCCCCGTGGTGGAGCAGCTGCTACTGAGAGGGTCTTGAAGGCGCCGTCATTAGCAAGTTTACTTCAGACGTTGCTCTTTACAGGAACAAAGCGCGCAAGGAGGAAAGCAGCATCGCTTGCTAGAGTATTCCAACGGTGTGAGCATGCAGCAGTTCATTATAGTGGGTTTGGTGTAGGATATGCATTTGCTGGAAACTCAGCTGCTGCTAGGGATTCAACTTTTCCTGGTGATGTCTCAGTGTCCATGTCCATTTCAGTTCCAGTATTATAGGGGTACTTACCACCATTCATCTTTTGTTCTTAGTTTTACTTGTAATATTCAAAAATTCTTTCATTGAAATATAAACGCGACAAAGAAAGAGAGAAATCATAGGAATACCACAAAATTCATGTGTTCTTAGCATTTTGCAGAAAACAGTGCCTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>24</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="5143" PGL_stop="10387"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5157" e_stop="5333"/>
            <exon e_start="5626" e_stop="7805"/>
            <exon e_start="7893" e_stop="8166"/>
            <exon e_start="9141" e_stop="10387"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.957" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="5157" e_stop="5333" e_length="177"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.957">
            <gDNA_intron_boundary i_start="5334" i_stop="5625" i_length="292"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="5626" e_stop="7805" e_length="2180"/>
          </exon>
          <intron i_serial="2" don_prob="0.900" acc_prob="1.000">
            <gDNA_intron_boundary i_start="7806" i_stop="7892" i_length="87"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="7893" e_stop="8166" e_length="274"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="8167" i_stop="9140" i_length="974"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="9141" e_stop="10387" e_length="1247"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5157" stop="5333"/>
              <exon start="5626" stop="6249"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575051" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6096" stop="7805"/>
              <exon start="7893" stop="8166"/>
              <exon start="9141" stop="10387"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575049" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTGATAGAAAGAGTATGAATAAGATATATATACATATAACATATATAGAGAGAGAAACAAAGAGTAAGAGAGACTAAACCCTAGATTTCATTCTGACTGAAAGCAGAGTATTTTGTATTTTGACCAACAAAGAGCTGTGTTTACATCTAATTTTTTTTCCGTCATTATTCATAAAG : ATCTTTTTGAAATGTACTCAGTTTGATAAACAAGAAGAGGCTATTGGGTTTTGGTTGGTGGGTGTGATTCAGTCTGAGGAAGTTGTTTTGTGATGTATGTGGATTGAGTTTTTTGAAGAGAAAAAAAGTTTCTGTTTGGTCTGTTTTCTAATTTGAGGATCTGCTGAAGGAGTTTTTGCAAATAAAGGGCTTGTAAAGATGATGTCCAAATCTTATACCAACTTGCTAGATCTAGCATCTGGGAATTTCCCGGTGATGGGGCGGGAAAAGAAGCGGCTGCCACGGGTAATGACAGTTGCTGGAGTTATTTCTGAGCTTGATGATGATCAAGCTAATAGTGTTACATCAGATGTTCCATCATCAATTATTGTAGATCGAATAATTATAGTGGCTAATCAGCTCCCTGTAAAAGCTAAGCGTAGGTCGGATAATAAAGGATGGAATTTTAGTTGGGATGAGGATTCGTTGTTGTTGCACATAAAAGATGGGTTGCCAGATGATATGGAAGTTCTCTATGTTGGTTCTTTAAAGGTTGAGGTCGATTCAAGTGAACAGGATGATGTTTCACAGTTGCTGCTGGATAGATTTAAATGTGTTCCTGCTTTTCTACCTCCAGACATTTTATCTAAATATTATCACGGTTTTTGCAAACAGCATTTATGGCCTCTTTTCCATTATATGCTTCCCTACTCTGCTAGTCATGGCAGTCGATTTGATCGGTCGTGGTGGGAGGCATATGTTGCAGCAAACAAGATATTTTCCCAGAAGGTTATTGAGGTGATAAATCCCGAGGATGACTATGTCTGGATCCATGATTATCATTTAATGGTTTTACCTACATTCTTGCGTAGGCGTTTCAATCGGCTGCGAATGGGGTTCTTTCTGCATAGCCCTTTCCCTTCATCAGAGATATATAGGACGCTTCCAGTGAGAGAGGAGATTCTCAAGGCCCTACTGAATTCTGACCTGATTGGTTTCCATACGTTCGATTATGCACGGCATTTCCTATCCTGTTGTAGTCGCATGTTGGGATTAGAGTATCAGTCAAAGAGGGGTTACATTGGACTTGAATACTTCGGACGGACAGTGGGGATCAAGATTATGCCAGTTGGGATTCACATGAGGCAGATTGAAAATGTGCTTCAACTAGCAGATAAAGAGTCGAGAGTTGCAGAACTTAAGCAACAATTTGAAGGTAAAACTGTTTTACTTGGTGTTGATGATATGGACATTTTCAAAGGTGTCGATTTGAAACTTCTGGCATTGGAGGAAATGTTAAAACAACATCCTAAGTGGCAAGGAAGAGCAGTGCTGGTCCAGATTGCTAATCCAGCTCGAGCAAAAGGAAAAGATATTGAGGAAATACAAGAAGAAATTCAAACAAGCGTCAAGAGAATCAATGACAAGTTTAGACAGCCTGGTTATGAACCCATCGTGTTCATTGATCGCCCAGTTTCTCTTAGTGAACGGACTGCCTATTACTCTGTTGCTGAGTGTGTAGTTGTAACTGCAGTAAGAGATGGCATGAACCTTACACCATATGAATACGTTGTGTGTAGGCAGGGCATCCCCGGTTCAGAGTGCACTGCAGAGTCCAATGGTCTGAAAAGCAGCATGCTGGTAGTGTCTGAGTTCATTGGCTGTTCTCCTTCTCTAAGTGGTGCTATACGTGTGAACCCATGGAATGTGGAAGCAACTGCAGAAGCACTGAATGAGGCAATTTCAATGGCTGATGGTGAGAAGGTGTTGCGCCATGAGAAGCATTACAAGTATGTAAGCACACATGACGTAGCTTATTGGTCAAGAAGCTTCTTCCAGGATCTGGAGAGAAGTTGCAGAGACCATTTCAGGCGACGTTGCTGGGGTATAGGCTTGAGCTTCGGTTTTAGGGTTGTAGCACTTGATCCTAATTTTAAAAAGCTATCCATTGACACTATTGTTTCTGCTTACTCAAGAGCCAAAAATCGGGCAATATTGTTGGATTATGATGGCACTCTCATGCCTCAAACAGCCATCAATAAGGTCCCTAGTCCCGAAGTTATTTCAATTATTAACTCACTTTGTGGGGATGAAAGAAATACCGTGTTTCTTGTGAGTGGACGAGGAAGGGATAGTTTAGGCCAGTGGTTTTCTCCGTGTGAGAAACTTGGTATTGCTGCGGAACACGGATACTTCTTAAG : GTGGTCTGCAGATAAAGAATGGGAAGTCGTAGGGCAGAACAATGATTTCCAGTGGATGCAGATAGCTGAACCTGTTATGAAACAGTATACAGAAGCTACAGATGGGTCTTCCATTGAAACAAAAGAGAGTGCTGTTGTTTGGCATTATCGAGATGCAGATCTTGGTTTTGGGTCTTGCCAAGCTAAAGAGATGTTAGACCATCTTGAGAGTGTTCTTGCAAATGAGCCTGTTGCTGTGAAGAGTGGGCAGTTCATTGTTGAAGTTAAGCCTCAG : GGAGTTAGTAAAGGTCTAGTTGCAGAGAAAATTTTTGCAACAATGGCTGAGAGTGGCCGGCAGGCTGACTTTGTGCTGTGCGTAGGTGATGATAGGTCTGACGAGGACATGTTTGAGATTATTGGAAATGCAATAAATAGTGGTATACTTTCTTCAAGCACGGAAGTGTATGCTTGCACAGTGGGACAAAAGCCAAGTAAAGCCACATATTATCTTGATGACACCGCAGAAGTTAGAACCATGCTTCATGCTCTTGCCGAGGAATCCATTCCTCCTCCTCCATCAGAAATTGTAACATGAAGCTCTGTTTGGAGTATATCCTTTTCTGTACTTCTCTGAGTGCACACCACAATGACTCAACCCTTTGAAGTTGTGCAAAGAAAATATCATTAGAGCTTGGACTAACGCATGATGCATATTTCATTATTACTCTCAAAAAATGGAAGGAGAGATATTGTACAGAATTCTTTGTCAGATGGTCAGTCCGAGCATCATCAAGCTAAAATTAGCCTTCTCTTCTTCGAAAGAACCTTAACTCCTGGGGTTGAGATTTAACTGATCCCAAATGTTTTAATACCGAGAAGCATTGCTCGGCCAGCTGGTTATATGTGTGAAGTTGACACTGAAGGGGAGAGCAGTGCCAAATGGTAATCTTCGTAGCCTTCAGAAAATATATACGCAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAATCCATGAACAGGATCTATACATCTGTGCTGCCCTTGTTGAATACATACTCTTATTCAAGTTACTTTTACGAAGGCCACACGTCAGTTTCTTGTCTTGCATATGACAAGATGGAGCAACAATTGTCAAAGACTCGTAACCTGCATTGTTAGATCAACTGTGAACAGGTGTTTTTTCTTCTCTTTTGCTTCATTTATTTAAGGATTCCTTCTTTTGCATCTAGGAGTGAGGTTATTATTGTTGTTGGGATACACCAATTTGTTGGATTCTCATAATTGTAAATGCTATAGAATTTTACCTTCTCTTTTCTTCCTTGTGATAGAGTTCCTAAACTAAATTTCGTAAGCTAGAACATGACAAAAAAAAACCAGGTGATTGTTAATAGTGACATCAATTATTCTTGGTCTTTCAAGTGGTAGTTTGCAGAACAAACATTTGATTCCTAATATTTGTAATATAAAGGTGGAAGTTTATATCTAGCTTTGTGAGCATCAAGCTGCTTTTTAATTCTTTCTT</gDNA_template>
            <first_frame> I  D  R  K  S  M  N  K  I  Y  I  H  I  T  Y  I  E  R  E  T  K  S  K  R  D  *  T  L  D  F  I  L  T  E  S  R  V  F  C  I  L  T  N  K  E  L  C  L  H  L  I  F  F  P  S  L  F  I  K  :  I  F  L  K  C  T  Q  F  D  K  Q  E  E  A  I  G  F  W  L  V  G  V  I  Q  S  E  E  V  V  L  *  C  M  W  I  E  F  F  E  E  K  K  S  F  C  L  V  C  F  L  I  *  G  S  A  E  G  V  F  A  N  K  G  L  V  K  M  M  S  K  S  Y  T  N  L  L  D  L  A  S  G  N  F  P  V  M  G  R  E  K  K  R  L  P  R  V  M  T  V  A  G  V  I  S  E  L  D  D  D  Q  A  N  S  V  T  S  D  V  P  S  S  I  I  V  D  R  I  I  I  V  A  N  Q  L  P  V  K  A  K  R  R  S  D  N  K  G  W  N  F  S  W  D  E  D  S  L  L  L  H  I  K  D  G  L  P  D  D  M  E  V  L  Y  V  G  S  L  K  V  E  V  D  S  S  E  Q  D  D  V  S  Q  L  L  L  D  R  F  K  C  V  P  A  F  L  P  P  D  I  L  S  K  Y  Y  H  G  F  C  K  Q  H  L  W  P  L  F  H  Y  M  L  P  Y  S  A  S  H  G  S  R  F  D  R  S  W  W  E  A  Y  V  A  A  N  K  I  F  S  Q  K  V  I  E  V  I  N  P  E  D  D  Y  V  W  I  H  D  Y  H  L  M  V  L  P  T  F  L  R  R  R  F  N  R  L  R  M  G  F  F  L  H  S  P  F  P  S  S  E  I  Y  R  T  L  P  V  R  E  E  I  L  K  A  L  L  N  S  D  L  I  G  F  H  T  F  D  Y  A  R  H  F  L  S  C  C  S  R  M  L  G  L  E  Y  Q  S  K  R  G  Y  I  G  L  E  Y  F  G  R  T  V  G  I  K  I  M  P  V  G  I  H  M  R  Q  I  E  N  V  L  Q  L  A  D  K  E  S  R  V  A  E  L  K  Q  Q  F  E  G  K  T  V  L  L  G  V  D  D  M  D  I  F  K  G  V  D  L  K  L  L  A  L  E  E  M  L  K  Q  H  P  K  W  Q  G  R  A  V  L  V  Q  I  A  N  P  A  R  A  K  G  K  D  I  E  E  I  Q  E  E  I  Q  T  S  V  K  R  I  N  D  K  F  R  Q  P  G  Y  E  P  I  V  F  I  D  R  P  V  S  L  S  E  R  T  A  Y  Y  S  V  A  E  C  V  V  V  T  A  V  R  D  G  M  N  L  T  P  Y  E  Y  V  V  C  R  Q  G  I  P  G  S  E  C  T  A  E  S  N  G  L  K  S  S  M  L  V  V  S  E  F  I  G  C  S  P  S  L  S  G  A  I  R  V  N  P  W  N  V  E  A  T  A  E  A  L  N  E  A  I  S  M  A  D  G  E  K  V  L  R  H  E  K  H  Y  K  Y  V  S  T  H  D  V  A  Y  W  S  R  S  F  F  Q  D  L  E  R  S  C  R  D  H  F  R  R  R  C  W  G  I  G  L  S  F  G  F  R  V  V  A  L  D  P  N  F  K  K  L  S  I  D  T  I  V  S  A  Y  S  R  A  K  N  R  A  I  L  L  D  Y  D  G  T  L  M  P  Q  T  A  I  N  K  V  P  S  P  E  V  I  S  I  I  N  S  L  C  G  D  E  R  N  T  V  F  L  V  S  G  R  G  R  D  S  L  G  Q  W  F  S  P  C  E  K  L  G  I  A  A  E  H  G  Y  F  L  R :   W  S  A  D  K  E  W  E  V  V  G  Q  N  N  D  F  Q  W  M  Q  I  A  E  P  V  M  K  Q  Y  T  E  A  T  D  G  S  S  I  E  T  K  E  S  A  V  V  W  H  Y  R  D  A  D  L  G  F  G  S  C  Q  A  K  E  M  L  D  H  L  E  S  V  L  A  N  E  P  V  A  V  K  S  G  Q  F  I  V  E  V  K  P  Q  :  G  V  S  K  G  L  V  A  E  K  I  F  A  T  M  A  E  S  G  R  Q  A  D  F  V  L  C  V  G  D  D  R  S  D  E  D  M  F  E  I  I  G  N  A  I  N  S  G  I  L  S  S  S  T  E  V  Y  A  C  T  V  G  Q  K  P  S  K  A  T  Y  Y  L  D  D  T  A  E  V  R  T  M  L  H  A  L  A  E  E  S  I  P  P  P  P  S  E  I  V  T  *  S  S  V  W  S  I  S  F  S  V  L  L  *  V  H  T  T  M  T  Q  P  F  E  V  V  Q  R  K  Y  H  *  S  L  D  *  R  M  M  H  I  S  L  L  L  S  K  N  G  R  R  D  I  V  Q  N  S  L  S  D  G  Q  S  E  H  H  Q  A  K  I  S  L  L  F  F  E  R  T  L  T  P  G  V  E  I  *  L  I  P  N  V  L  I  P  R  S  I  A  R  P  A  G  Y  M  C  E  V  D  T  E  G  E  S  S  A  K  W  *  S  S  *  P  S  E  N  I  Y  A  R  D  S  *  N  G  R  G  K  *  S  F  C  T  F  S  L  I  H  E  Q  D  L  Y  I  C  A  A  L  V  E  Y  I  L  L  F  K  L  L  L  R  R  P  H  V  S  F  L  S  C  I  *  Q  D  G  A  T  I  V  K  D  S  *  P  A  L  L  D  Q  L  *  T  G  V  F  S  S  L  L  L  H  L  F  K  D  S  F  F  C  I  *  E  *  G  Y  Y  C  C  W  D  T  P  I  C  W  I  L  I  I  V  N  A  I  E  F  Y  L  L  F  S  S  L  *  *  S  S  *  T  K  F  R  K  L  E  H  D  K  K  K  P  G  D  C  *  *  *  H  Q  L  F  L  V  F  Q  V  V  V  C  R  T  N  I  *  F  L  I  F  V  I  *  R  W  K  F  I  S  S  F  V  S  I  K  L  L  F  N  S  F   </first_frame>
            <second_frame>  L  I  E  R  V  *  I  R  Y  I  Y  I  *  H  I  *  R  E  K  Q  R  V  R  E  T  K  P  *  I  S  F  *  L  K  A  E  Y  F  V  F  *  P  T  K  S  C  V  Y  I  *  F  F  F  R  H  Y  S  *  R :   S  F  *  N  V  L  S  L  I  N  K  K  R  L  L  G  F  G  W  W  V  *  F  S  L  R  K  L  F  C  D  V  C  G  L  S  F  L  K  R  K  K  V  S  V  W  S  V  F  *  F  E  D  L  L  K  E  F  L  Q  I  K  G  L  *  R  *  C  P  N  L  I  P  T  C  *  I  *  H  L  G  I  S  R  *  W  G  G  K  R  S  G  C  H  G  *  *  Q  L  L  E  L  F  L  S  L  M  M  I  K  L  I  V  L  H  Q  M  F  H  H  Q  L  L  *  I  E  *  L  *  W  L  I  S  S  L  *  K  L  S  V  G  R  I  I  K  D  G  I  L  V  G  M  R  I  R  C  C  C  T  *  K  M  G  C  Q  M  I  W  K  F  S  M  L  V  L  *  R  L  R  S  I  Q  V  N  R  M  M  F  H  S  C  C  W  I  D  L  N  V  F  L  L  F  Y  L  Q  T  F  Y  L  N  I  I  T  V  F  A  N  S  I  Y  G  L  F  S  I  I  C  F  P  T  L  L  V  M  A  V  D  L  I  G  R  G  G  R  H  M  L  Q  Q  T  R  Y  F  P  R  R  L  L  R  *  *  I  P  R  M  T  M  S  G  S  M  I  I  I  *  W  F  Y  L  H  S  C  V  G  V  S  I  G  C  E  W  G  S  F  C  I  A  L  S  L  H  Q  R  Y  I  G  R  F  Q  *  E  R  R  F  S  R  P  Y  *  I  L  T  *  L  V  S  I  R  S  I  M  H  G  I  S  Y  P  V  V  V  A  C  W  D  *  S  I  S  Q  R  G  V  T  L  D  L  N  T  S  D  G  Q  W  G  S  R  L  C  Q  L  G  F  T  *  G  R  L  K  M  C  F  N  *  Q  I  K  S  R  E  L  Q  N  L  S  N  N  L  K  V  K  L  F  Y  L  V  L  M  I  W  T  F  S  K  V  S  I  *  N  F  W  H  W  R  K  C  *  N  N  I  L  S  G  K  E  E  Q  C  W  S  R  L  L  I  Q  L  E  Q  K  E  K  I  L  R  K  Y  K  K  K  F  K  Q  A  S  R  E  S  M  T  S  L  D  S  L  V  M  N  P  S  C  S  L  I  A  Q  F  L  L  V  N  G  L  P  I  T  L  L  L  S  V  *  L  *  L  Q  *  E  M  A  *  T  L  H  H  M  N  T  L  C  V  G  R  A  S  P  V  Q  S  A  L  Q  S  P  M  V  *  K  A  A  C  W  *  C  L  S  S  L  A  V  L  L  L  *  V  V  L  Y  V  *  T  H  G  M  W  K  Q  L  Q  K  H  *  M  R  Q  F  Q  W  L  M  V  R  R  C  C  A  M  R  S  I  T  S  M  *  A  H  M  T  *  L  I  G  Q  E  A  S  S  R  I  W  R  E  V  A  E  T  I  S  G  D  V  A  G  V  *  A  *  A  S  V  L  G  L  *  H  L  I  L  I  L  K  S  Y  P  L  T  L  L  F  L  L  T  Q  E  P  K  I  G  Q  Y  C  W  I  M  M  A  L  S  C  L  K  Q  P  S  I  R  S  L  V  P  K  L  F  Q  L  L  T  H  F  V  G  M  K  E  I  P  C  F  L  *  V  D  E  E  G  I  V  *  A  S  G  F  L  R  V  R  N  L  V  L  L  R  N  T  D  T  S  *   : G  G  L  Q  I  K  N  G  K  S  *  G  R  T  M  I  S  S  G  C  R  *  L  N  L  L  *  N  S  I  Q  K  L  Q  M  G  L  P  L  K  Q  K  R  V  L  L  F  G  I  I  E  M  Q  I  L  V  L  G  L  A  K  L  K  R  C  *  T  I  L  R  V  F  L  Q  M  S  L  L  L  *  R  V  G  S  S  L  L  K  L  S  L  R :   E  L  V  K  V  *  L  Q  R  K  F  L  Q  Q  W  L  R  V  A  G  R  L  T  L  C  C  A  *  V  M  I  G  L  T  R  T  C  L  R  L  L  E  M  Q  *  I  V  V  Y  F  L  Q  A  R  K  C  M  L  A  Q  W  D  K  S  Q  V  K  P  H  I  I  L  M  T  P  Q  K  L  E  P  C  F  M  L  L  P  R  N  P  F  L  L  L  H  Q  K  L  *  H  E  A  L  F  G  V  Y  P  F  L  Y  F  S  E  C  T  P  Q  *  L  N  P  L  K  L  C  K  E  N  I  I  R  A  W  T  N  A  *  C  I  F  H  Y  Y  S  Q  K  M  E  G  E  I  L  Y  R  I  L  C  Q  M  V  S  P  S  I  I  K  L  K  L  A  F  S  S  S  K  E  P  *  L  L  G  L  R  F  N  *  S  Q  M  F  *  Y  R  E  A  L  L  G  Q  L  V  I  C  V  K  L  T  L  K  G  R  A  V  P  N  G  N  L  R  S  L  Q  K  I  Y  T  Q  E  T  H  R  M  A  E  A  N  R  A  F  A  H  F  R  *  S  M  N  R  I  Y  T  S  V  L  P  L  L  N  T  Y  S  Y  S  S  Y  F  Y  E  G  H  T  S  V  S  C  L  A  Y  D  K  M  E  Q  Q  L  S  K  T  R  N  L  H  C  *  I  N  C  E  Q  V  F  F  L  L  F  C  F  I  Y  L  R  I  P  S  F  A  S  R  S  E  V  I  I  V  V  G  I  H  Q  F  V  G  F  S  *  L  *  M  L  *  N  F  T  F  S  F  L  P  C  D  R  V  P  K  L  N  F  V  S  *  N  M  T  K  K  N  Q  V  I  V  N  S  D  I  N  Y  S  W  S  F  K  W  *  F  A  E  Q  T  F  D  S  *  Y  L  *  Y  K  G  G  S  L  Y  L  A  L  *  A  S  S  C  F  L  I  L  S  </second_frame>
            <third_frame>   *  *  K  E  Y  E  *  D  I  Y  T  Y  N  I  Y  R  E  R  N  K  E  *  E  R  L  N  P  R  F  H  S  D  *  K  Q  S  I  L  Y  F  D  Q  Q  R  A  V  F  T  S  N  F  F  S  V  I  I  H  K   : D  L  F  E  M  Y  S  V  *  *  T  R  R  G  Y  W  V  L  V  G  G  C  D  S  V  *  G  S  C  F  V  M  Y  V  D  *  V  F  *  R  E  K  K  F  L  F  G  L  F  S  N  L  R  I  C  *  R  S  F  C  K  *  R  A  C  K  D  D  V  Q  I  L  Y  Q  L  A  R  S  S  I  W  E  F  P  G  D  G  A  G  K  E  A  A  A  T  G  N  D  S  C  W  S  Y  F  *  A  *  *  *  S  S  *  *  C  Y  I  R  C  S  I  I  N  Y  C  R  S  N  N  Y  S  G  *  S  A  P  C  K  S  *  A  *  V  G  *  *  R  M  E  F  *  L  G  *  G  F  V  V  V  A  H  K  R  W  V  A  R  *  Y  G  S  S  L  C  W  F  F  K  G  *  G  R  F  K  *  T  G  *  C  F  T  V  A  A  G  *  I  *  M  C  S  C  F  S  T  S  R  H  F  I  *  I  L  S  R  F  L  Q  T  A  F  M  A  S  F  P  L  Y  A  S  L  L  C  *  S  W  Q  S  I  *  S  V  V  V  G  G  I  C  C  S  K  Q  D  I  F  P  E  G  Y  *  G  D  K  S  R  G  *  L  C  L  D  P  *  L  S  F  N  G  F  T  Y  I  L  A  *  A  F  Q  S  A  A  N  G  V  L  S  A  *  P  F  P  F  I  R  D  I  *  D  A  S  S  E  R  G  D  S  Q  G  P  T  E  F  *  P  D  W  F  P  Y  V  R  L  C  T  A  F  P  I  L  L  *  S  H  V  G  I  R  V  S  V  K  E  G  L  H  W  T  *  I  L  R  T  D  S  G  D  Q  D  Y  A  S  W  D  S  H  E  A  D  *  K  C  A  S  T  S  R  *  R  V  E  S  C  R  T  *  A  T  I  *  R  *  N  C  F  T  W  C  *  *  Y  G  H  F  Q  R  C  R  F  E  T  S  G  I  G  G  N  V  K  T  T  S  *  V  A  R  K  S  S  A  G  P  D  C  *  S  S  S  S  K  R  K  R  Y  *  G  N  T  R  R  N  S  N  K  R  Q  E  N  Q  *  Q  V  *  T  A  W  L  *  T  H  R  V  H  *  S  P  S  F  S  *  *  T  D  C  L  L  L  C  C  *  V  C  S  C  N  C  S  K  R  W  H  E  P  Y  T  I  *  I  R  C  V  *  A  G  H  P  R  F  R  V  H  C  R  V  Q  W  S  E  K  Q  H  A  G  S  V  *  V  H  W  L  F  S  F  S  K  W  C  Y  T  C  E  P  M  E  C  G  S  N  C  R  S  T  E  *  G  N  F  N  G  *  W  *  E  G  V  A  P  *  E  A  L  Q  V  C  K  H  T  *  R  S  L  L  V  K  K  L  L  P  G  S  G  E  K  L  Q  R  P  F  Q  A  T  L  L  G  Y  R  L  E  L  R  F  *  G  C  S  T  *  S  *  F  *  K  A  I  H  *  H  Y  C  F  C  L  L  K  S  Q  K  S  G  N  I  V  G  L  *  W  H  S  H  A  S  N  S  H  Q  *  G  P  *  S  R  S  Y  F  N  Y  *  L  T  L  W  G  *  K  K  Y  R  V  S  C  E  W  T  R  K  G  *  F  R  P  V  V  F  S  V  *  E  T  W  Y  C  C  G  T  R  I  L  L  K  :  V  V  C  R  *  R  M  G  S  R  R  A  E  Q  *  F  P  V  D  A  D  S  *  T  C  Y  E  T  V  Y  R  S  Y  R  W  V  F  H  *  N  K  R  E  C  C  C  L  A  L  S  R  C  R  S  W  F  W  V  L  P  S  *  R  D  V  R  P  S  *  E  C  S  C  K  *  A  C  C  C  E  E  W  A  V  H  C  *  S  *  A  S   : G  S  *  *  R  S  S  C  R  E  N  F  C  N  N  G  *  E  W  P  A  G  *  L  C  A  V  R  R  *  *  *  V  *  R  G  H  V  *  D  Y  W  K  C  N  K  *  W  Y  T  F  F  K  H  G  S  V  C  L  H  S  G  T  K  A  K  *  S  H  I  L  S  *  *  H  R  R  S  *  N  H  A  S  C  S  C  R  G  I  H  S  S  S  S  I  R  N  C  N  M  K  L  C  L  E  Y  I  L  F  C  T  S  L  S  A  H  H  N  D  S  T  L  *  S  C  A  K  K  I  S  L  E  L  G  L  T  H  D  A  Y  F  I  I  T  L  K  K  W  K  E  R  Y  C  T  E  F  F  V  R  W  S  V  R  A  S  S  S  *  N  *  P  S  L  L  R  K  N  L  N  S  W  G  *  D  L  T  D  P  K  C  F  N  T  E  K  H  C  S  A  S  W  L  Y  V  *  S  *  H  *  R  G  E  Q  C  Q  M  V  I  F  V  A  F  R  K  Y  I  R  K  R  L  I  E  W  Q  R  Q  I  E  L  L  H  I  F  V  N  P  *  T  G  S  I  H  L  C  C  P  C  *  I  H  T  L  I  Q  V  T  F  T  K  A  T  R  Q  F  L  V  L  H  M  T  R  W  S  N  N  C  Q  R  L  V  T  C  I  V  R  S  T  V  N  R  C  F  F  F  S  F  A  S  F  I  *  G  F  L  L  L  H  L  G  V  R  L  L  L  L  L  G  Y  T  N  L  L  D  S  H  N  C  K  C  Y  R  I  L  P  S  L  F  F  L  V  I  E  F  L  N  *  I  S  *  A  R  T  *  Q  K  K  T  R  *  L  L  I  V  T  S  I  I  L  G  L  S  S  G  S  L  Q  N  K  H  L  I  P  N  I  C  N  I  K  V  E  V  Y  I  *  L  C  E  H  Q  A  A  F  *  F  F  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5782" stop="7805"/>
                    <exon start="7893" stop="8166"/>
                    <exon start="9141" stop="9440"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>2595</number_coding_nucleotides>
                  <number_encoded_amino_acids>865</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSAEGVFANKGLVKMMSKSYTNLLDLASGNFPVMGREKKRLPRVMTVAGVISELDDDQANSVTSDVPSSIIVDRIIIVANQLPVKAKRRSDNKGWNFSWDEDSLLLHIKDGLPDDMEVLYVGSLKVEVDSSEQDDVSQLLLDRFKCVPAFLPPDILSKYYHGFCKQHLWPLFHYMLPYSASHGSRFDRSWWEAYVAANKIFSQKVIEVINPEDDYVWIHDYHLMVLPTFLRRRFNRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNSDLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYFGRTVGIKIMPVGIHMRQIENVLQLADKESRVAELKQQFEGKTVLLGVDDMDIFKGVDLKLLALEEMLKQHPKWQGRAVLVQIANPARAKGKDIEEIQEEIQTSVKRINDKFRQPGYEPIVFIDRPVSLSERTAYYSVAECVVVTAVRDGMNLTPYEYVVCRQGIPGSECTAESNGLKSSMLVVSEFIGCSPSLSGAIRVNPWNVEATAEALNEAISMADGEKVLRHEKHYKYVSTHDVAYWSRSFFQDLERSCRDHFRRRCWGIGLSFGFRVVALDPNFKKLSIDTIVSAYSRAKNRAILLDYDGTLMPQTAINKVPSPEVISIINSLCGDERNTVFLVSGRGRDSLGQWFSPCEKLGIAAEHGYFLRWSADKEWEVVGQNNDFQWMQIAEPVMKQYTEATDGSSIETKESAVVWHYRDADLGFGSCQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQGVSKGLVAEKIFATMAESGRQADFVLCVGDDRSDEDMFEIIGNAINSGILSSSTEVYACTVGQKPSKATYYLDDTAEVRTMLHALAEESIPPPPSEIVT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="5143" e_stop="5333"/>
            <exon e_start="5647" e_stop="7805"/>
            <exon e_start="7893" e_stop="8166"/>
            <exon e_start="9141" e_stop="10387"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.900" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="5143" e_stop="5333" e_length="191"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.900">
            <gDNA_intron_boundary i_start="5334" i_stop="5646" i_length="313"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="5647" e_stop="7805" e_length="2159"/>
          </exon>
          <intron i_serial="2" don_prob="0.900" acc_prob="1.000">
            <gDNA_intron_boundary i_start="7806" i_stop="7892" i_length="87"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="7893" e_stop="8166" e_length="274"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="8167" i_stop="9140" i_length="974"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="9141" e_stop="10387" e_length="1247"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5143" stop="5333"/>
              <exon start="5647" stop="6160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575044" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6096" stop="7805"/>
              <exon start="7893" stop="8166"/>
              <exon start="9141" stop="10387"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575049" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAGTTAATGAACATTGATAGAAAGAGTATGAATAAGATATATATACATATAACATATATAGAGAGAGAAACAAAGAGTAAGAGAGACTAAACCCTAGATTTCATTCTGACTGAAAGCAGAGTATTTTGTATTTTGACCAACAAAGAGCTGTGTTTACATCTAATTTTTTTTCCGTCATTATTCATAAAG : TTTGATAAACAAGAAGAGGCTATTGGGTTTTGGTTGGTGGGTGTGATTCAGTCTGAGGAAGTTGTTTTGTGATGTATGTGGATTGAGTTTTTTGAAGAGAAAAAAAGTTTCTGTTTGGTCTGTTTTCTAATTTGAGGATCTGCTGAAGGAGTTTTTGCAAATAAAGGGCTTGTAAAGATGATGTCCAAATCTTATACCAACTTGCTAGATCTAGCATCTGGGAATTTCCCGGTGATGGGGCGGGAAAAGAAGCGGCTGCCACGGGTAATGACAGTTGCTGGAGTTATTTCTGAGCTTGATGATGATCAAGCTAATAGTGTTACATCAGATGTTCCATCATCAATTATTGTAGATCGAATAATTATAGTGGCTAATCAGCTCCCTGTAAAAGCTAAGCGTAGGTCGGATAATAAAGGATGGAATTTTAGTTGGGATGAGGATTCGTTGTTGTTGCACATAAAAGATGGGTTGCCAGATGATATGGAAGTTCTCTATGTTGGTTCTTTAAAGGTTGAGGTCGATTCAAGTGAACAGGATGATGTTTCACAGTTGCTGCTGGATAGATTTAAATGTGTTCCTGCTTTTCTACCTCCAGACATTTTATCTAAATATTATCACGGTTTTTGCAAACAGCATTTATGGCCTCTTTTCCATTATATGCTTCCCTACTCTGCTAGTCATGGCAGTCGATTTGATCGGTCGTGGTGGGAGGCATATGTTGCAGCAAACAAGATATTTTCCCAGAAGGTTATTGAGGTGATAAATCCCGAGGATGACTATGTCTGGATCCATGATTATCATTTAATGGTTTTACCTACATTCTTGCGTAGGCGTTTCAATCGGCTGCGAATGGGGTTCTTTCTGCATAGCCCTTTCCCTTCATCAGAGATATATAGGACGCTTCCAGTGAGAGAGGAGATTCTCAAGGCCCTACTGAATTCTGACCTGATTGGTTTCCATACGTTCGATTATGCACGGCATTTCCTATCCTGTTGTAGTCGCATGTTGGGATTAGAGTATCAGTCAAAGAGGGGTTACATTGGACTTGAATACTTCGGACGGACAGTGGGGATCAAGATTATGCCAGTTGGGATTCACATGAGGCAGATTGAAAATGTGCTTCAACTAGCAGATAAAGAGTCGAGAGTTGCAGAACTTAAGCAACAATTTGAAGGTAAAACTGTTTTACTTGGTGTTGATGATATGGACATTTTCAAAGGTGTCGATTTGAAACTTCTGGCATTGGAGGAAATGTTAAAACAACATCCTAAGTGGCAAGGAAGAGCAGTGCTGGTCCAGATTGCTAATCCAGCTCGAGCAAAAGGAAAAGATATTGAGGAAATACAAGAAGAAATTCAAACAAGCGTCAAGAGAATCAATGACAAGTTTAGACAGCCTGGTTATGAACCCATCGTGTTCATTGATCGCCCAGTTTCTCTTAGTGAACGGACTGCCTATTACTCTGTTGCTGAGTGTGTAGTTGTAACTGCAGTAAGAGATGGCATGAACCTTACACCATATGAATACGTTGTGTGTAGGCAGGGCATCCCCGGTTCAGAGTGCACTGCAGAGTCCAATGGTCTGAAAAGCAGCATGCTGGTAGTGTCTGAGTTCATTGGCTGTTCTCCTTCTCTAAGTGGTGCTATACGTGTGAACCCATGGAATGTGGAAGCAACTGCAGAAGCACTGAATGAGGCAATTTCAATGGCTGATGGTGAGAAGGTGTTGCGCCATGAGAAGCATTACAAGTATGTAAGCACACATGACGTAGCTTATTGGTCAAGAAGCTTCTTCCAGGATCTGGAGAGAAGTTGCAGAGACCATTTCAGGCGACGTTGCTGGGGTATAGGCTTGAGCTTCGGTTTTAGGGTTGTAGCACTTGATCCTAATTTTAAAAAGCTATCCATTGACACTATTGTTTCTGCTTACTCAAGAGCCAAAAATCGGGCAATATTGTTGGATTATGATGGCACTCTCATGCCTCAAACAGCCATCAATAAGGTCCCTAGTCCCGAAGTTATTTCAATTATTAACTCACTTTGTGGGGATGAAAGAAATACCGTGTTTCTTGTGAGTGGACGAGGAAGGGATAGTTTAGGCCAGTGGTTTTCTCCGTGTGAGAAACTTGGTATTGCTGCGGAACACGGATACTTCTTAAG : GTGGTCTGCAGATAAAGAATGGGAAGTCGTAGGGCAGAACAATGATTTCCAGTGGATGCAGATAGCTGAACCTGTTATGAAACAGTATACAGAAGCTACAGATGGGTCTTCCATTGAAACAAAAGAGAGTGCTGTTGTTTGGCATTATCGAGATGCAGATCTTGGTTTTGGGTCTTGCCAAGCTAAAGAGATGTTAGACCATCTTGAGAGTGTTCTTGCAAATGAGCCTGTTGCTGTGAAGAGTGGGCAGTTCATTGTTGAAGTTAAGCCTCAG : GGAGTTAGTAAAGGTCTAGTTGCAGAGAAAATTTTTGCAACAATGGCTGAGAGTGGCCGGCAGGCTGACTTTGTGCTGTGCGTAGGTGATGATAGGTCTGACGAGGACATGTTTGAGATTATTGGAAATGCAATAAATAGTGGTATACTTTCTTCAAGCACGGAAGTGTATGCTTGCACAGTGGGACAAAAGCCAAGTAAAGCCACATATTATCTTGATGACACCGCAGAAGTTAGAACCATGCTTCATGCTCTTGCCGAGGAATCCATTCCTCCTCCTCCATCAGAAATTGTAACATGAAGCTCTGTTTGGAGTATATCCTTTTCTGTACTTCTCTGAGTGCACACCACAATGACTCAACCCTTTGAAGTTGTGCAAAGAAAATATCATTAGAGCTTGGACTAACGCATGATGCATATTTCATTATTACTCTCAAAAAATGGAAGGAGAGATATTGTACAGAATTCTTTGTCAGATGGTCAGTCCGAGCATCATCAAGCTAAAATTAGCCTTCTCTTCTTCGAAAGAACCTTAACTCCTGGGGTTGAGATTTAACTGATCCCAAATGTTTTAATACCGAGAAGCATTGCTCGGCCAGCTGGTTATATGTGTGAAGTTGACACTGAAGGGGAGAGCAGTGCCAAATGGTAATCTTCGTAGCCTTCAGAAAATATATACGCAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAATCCATGAACAGGATCTATACATCTGTGCTGCCCTTGTTGAATACATACTCTTATTCAAGTTACTTTTACGAAGGCCACACGTCAGTTTCTTGTCTTGCATATGACAAGATGGAGCAACAATTGTCAAAGACTCGTAACCTGCATTGTTAGATCAACTGTGAACAGGTGTTTTTTCTTCTCTTTTGCTTCATTTATTTAAGGATTCCTTCTTTTGCATCTAGGAGTGAGGTTATTATTGTTGTTGGGATACACCAATTTGTTGGATTCTCATAATTGTAAATGCTATAGAATTTTACCTTCTCTTTTCTTCCTTGTGATAGAGTTCCTAAACTAAATTTCGTAAGCTAGAACATGACAAAAAAAAACCAGGTGATTGTTAATAGTGACATCAATTATTCTTGGTCTTTCAAGTGGTAGTTTGCAGAACAAACATTTGATTCCTAATATTTGTAATATAAAGGTGGAAGTTTATATCTAGCTTTGTGAGCATCAAGCTGCTTTTTAATTCTTTCTT</gDNA_template>
            <first_frame> K  S  *  *  T  L  I  E  R  V  *  I  R  Y  I  Y  I  *  H  I  *  R  E  K  Q  R  V  R  E  T  K  P  *  I  S  F  *  L  K  A  E  Y  F  V  F  *  P  T  K  S  C  V  Y  I  *  F  F  F  R  H  Y  S  *  S :   L  I  N  K  K  R  L  L  G  F  G  W  W  V  *  F  S  L  R  K  L  F  C  D  V  C  G  L  S  F  L  K  R  K  K  V  S  V  W  S  V  F  *  F  E  D  L  L  K  E  F  L  Q  I  K  G  L  *  R  *  C  P  N  L  I  P  T  C  *  I  *  H  L  G  I  S  R  *  W  G  G  K  R  S  G  C  H  G  *  *  Q  L  L  E  L  F  L  S  L  M  M  I  K  L  I  V  L  H  Q  M  F  H  H  Q  L  L  *  I  E  *  L  *  W  L  I  S  S  L  *  K  L  S  V  G  R  I  I  K  D  G  I  L  V  G  M  R  I  R  C  C  C  T  *  K  M  G  C  Q  M  I  W  K  F  S  M  L  V  L  *  R  L  R  S  I  Q  V  N  R  M  M  F  H  S  C  C  W  I  D  L  N  V  F  L  L  F  Y  L  Q  T  F  Y  L  N  I  I  T  V  F  A  N  S  I  Y  G  L  F  S  I  I  C  F  P  T  L  L  V  M  A  V  D  L  I  G  R  G  G  R  H  M  L  Q  Q  T  R  Y  F  P  R  R  L  L  R  *  *  I  P  R  M  T  M  S  G  S  M  I  I  I  *  W  F  Y  L  H  S  C  V  G  V  S  I  G  C  E  W  G  S  F  C  I  A  L  S  L  H  Q  R  Y  I  G  R  F  Q  *  E  R  R  F  S  R  P  Y  *  I  L  T  *  L  V  S  I  R  S  I  M  H  G  I  S  Y  P  V  V  V  A  C  W  D  *  S  I  S  Q  R  G  V  T  L  D  L  N  T  S  D  G  Q  W  G  S  R  L  C  Q  L  G  F  T  *  G  R  L  K  M  C  F  N  *  Q  I  K  S  R  E  L  Q  N  L  S  N  N  L  K  V  K  L  F  Y  L  V  L  M  I  W  T  F  S  K  V  S  I  *  N  F  W  H  W  R  K  C  *  N  N  I  L  S  G  K  E  E  Q  C  W  S  R  L  L  I  Q  L  E  Q  K  E  K  I  L  R  K  Y  K  K  K  F  K  Q  A  S  R  E  S  M  T  S  L  D  S  L  V  M  N  P  S  C  S  L  I  A  Q  F  L  L  V  N  G  L  P  I  T  L  L  L  S  V  *  L  *  L  Q  *  E  M  A  *  T  L  H  H  M  N  T  L  C  V  G  R  A  S  P  V  Q  S  A  L  Q  S  P  M  V  *  K  A  A  C  W  *  C  L  S  S  L  A  V  L  L  L  *  V  V  L  Y  V  *  T  H  G  M  W  K  Q  L  Q  K  H  *  M  R  Q  F  Q  W  L  M  V  R  R  C  C  A  M  R  S  I  T  S  M  *  A  H  M  T  *  L  I  G  Q  E  A  S  S  R  I  W  R  E  V  A  E  T  I  S  G  D  V  A  G  V  *  A  *  A  S  V  L  G  L  *  H  L  I  L  I  L  K  S  Y  P  L  T  L  L  F  L  L  T  Q  E  P  K  I  G  Q  Y  C  W  I  M  M  A  L  S  C  L  K  Q  P  S  I  R  S  L  V  P  K  L  F  Q  L  L  T  H  F  V  G  M  K  E  I  P  C  F  L  *  V  D  E  E  G  I  V  *  A  S  G  F  L  R  V  R  N  L  V  L  L  R  N  T  D  T  S  *   : G  G  L  Q  I  K  N  G  K  S  *  G  R  T  M  I  S  S  G  C  R  *  L  N  L  L  *  N  S  I  Q  K  L  Q  M  G  L  P  L  K  Q  K  R  V  L  L  F  G  I  I  E  M  Q  I  L  V  L  G  L  A  K  L  K  R  C  *  T  I  L  R  V  F  L  Q  M  S  L  L  L  *  R  V  G  S  S  L  L  K  L  S  L  R :   E  L  V  K  V  *  L  Q  R  K  F  L  Q  Q  W  L  R  V  A  G  R  L  T  L  C  C  A  *  V  M  I  G  L  T  R  T  C  L  R  L  L  E  M  Q  *  I  V  V  Y  F  L  Q  A  R  K  C  M  L  A  Q  W  D  K  S  Q  V  K  P  H  I  I  L  M  T  P  Q  K  L  E  P  C  F  M  L  L  P  R  N  P  F  L  L  L  H  Q  K  L  *  H  E  A  L  F  G  V  Y  P  F  L  Y  F  S  E  C  T  P  Q  *  L  N  P  L  K  L  C  K  E  N  I  I  R  A  W  T  N  A  *  C  I  F  H  Y  Y  S  Q  K  M  E  G  E  I  L  Y  R  I  L  C  Q  M  V  S  P  S  I  I  K  L  K  L  A  F  S  S  S  K  E  P  *  L  L  G  L  R  F  N  *  S  Q  M  F  *  Y  R  E  A  L  L  G  Q  L  V  I  C  V  K  L  T  L  K  G  R  A  V  P  N  G  N  L  R  S  L  Q  K  I  Y  T  Q  E  T  H  R  M  A  E  A  N  R  A  F  A  H  F  R  *  S  M  N  R  I  Y  T  S  V  L  P  L  L  N  T  Y  S  Y  S  S  Y  F  Y  E  G  H  T  S  V  S  C  L  A  Y  D  K  M  E  Q  Q  L  S  K  T  R  N  L  H  C  *  I  N  C  E  Q  V  F  F  L  L  F  C  F  I  Y  L  R  I  P  S  F  A  S  R  S  E  V  I  I  V  V  G  I  H  Q  F  V  G  F  S  *  L  *  M  L  *  N  F  T  F  S  F  L  P  C  D  R  V  P  K  L  N  F  V  S  *  N  M  T  K  K  N  Q  V  I  V  N  S  D  I  N  Y  S  W  S  F  K  W  *  F  A  E  Q  T  F  D  S  *  Y  L  *  Y  K  G  G  S  L  Y  L  A  L  *  A  S  S  C  F  L  I  L  S  </first_frame>
            <second_frame>  K  V  N  E  H  *  *  K  E  Y  E  *  D  I  Y  T  Y  N  I  Y  R  E  R  N  K  E  *  E  R  L  N  P  R  F  H  S  D  *  K  Q  S  I  L  Y  F  D  Q  Q  R  A  V  F  T  S  N  F  F  S  V  I  I  H  K   : V  *  *  T  R  R  G  Y  W  V  L  V  G  G  C  D  S  V  *  G  S  C  F  V  M  Y  V  D  *  V  F  *  R  E  K  K  F  L  F  G  L  F  S  N  L  R  I  C  *  R  S  F  C  K  *  R  A  C  K  D  D  V  Q  I  L  Y  Q  L  A  R  S  S  I  W  E  F  P  G  D  G  A  G  K  E  A  A  A  T  G  N  D  S  C  W  S  Y  F  *  A  *  *  *  S  S  *  *  C  Y  I  R  C  S  I  I  N  Y  C  R  S  N  N  Y  S  G  *  S  A  P  C  K  S  *  A  *  V  G  *  *  R  M  E  F  *  L  G  *  G  F  V  V  V  A  H  K  R  W  V  A  R  *  Y  G  S  S  L  C  W  F  F  K  G  *  G  R  F  K  *  T  G  *  C  F  T  V  A  A  G  *  I  *  M  C  S  C  F  S  T  S  R  H  F  I  *  I  L  S  R  F  L  Q  T  A  F  M  A  S  F  P  L  Y  A  S  L  L  C  *  S  W  Q  S  I  *  S  V  V  V  G  G  I  C  C  S  K  Q  D  I  F  P  E  G  Y  *  G  D  K  S  R  G  *  L  C  L  D  P  *  L  S  F  N  G  F  T  Y  I  L  A  *  A  F  Q  S  A  A  N  G  V  L  S  A  *  P  F  P  F  I  R  D  I  *  D  A  S  S  E  R  G  D  S  Q  G  P  T  E  F  *  P  D  W  F  P  Y  V  R  L  C  T  A  F  P  I  L  L  *  S  H  V  G  I  R  V  S  V  K  E  G  L  H  W  T  *  I  L  R  T  D  S  G  D  Q  D  Y  A  S  W  D  S  H  E  A  D  *  K  C  A  S  T  S  R  *  R  V  E  S  C  R  T  *  A  T  I  *  R  *  N  C  F  T  W  C  *  *  Y  G  H  F  Q  R  C  R  F  E  T  S  G  I  G  G  N  V  K  T  T  S  *  V  A  R  K  S  S  A  G  P  D  C  *  S  S  S  S  K  R  K  R  Y  *  G  N  T  R  R  N  S  N  K  R  Q  E  N  Q  *  Q  V  *  T  A  W  L  *  T  H  R  V  H  *  S  P  S  F  S  *  *  T  D  C  L  L  L  C  C  *  V  C  S  C  N  C  S  K  R  W  H  E  P  Y  T  I  *  I  R  C  V  *  A  G  H  P  R  F  R  V  H  C  R  V  Q  W  S  E  K  Q  H  A  G  S  V  *  V  H  W  L  F  S  F  S  K  W  C  Y  T  C  E  P  M  E  C  G  S  N  C  R  S  T  E  *  G  N  F  N  G  *  W  *  E  G  V  A  P  *  E  A  L  Q  V  C  K  H  T  *  R  S  L  L  V  K  K  L  L  P  G  S  G  E  K  L  Q  R  P  F  Q  A  T  L  L  G  Y  R  L  E  L  R  F  *  G  C  S  T  *  S  *  F  *  K  A  I  H  *  H  Y  C  F  C  L  L  K  S  Q  K  S  G  N  I  V  G  L  *  W  H  S  H  A  S  N  S  H  Q  *  G  P  *  S  R  S  Y  F  N  Y  *  L  T  L  W  G  *  K  K  Y  R  V  S  C  E  W  T  R  K  G  *  F  R  P  V  V  F  S  V  *  E  T  W  Y  C  C  G  T  R  I  L  L  K  :  V  V  C  R  *  R  M  G  S  R  R  A  E  Q  *  F  P  V  D  A  D  S  *  T  C  Y  E  T  V  Y  R  S  Y  R  W  V  F  H  *  N  K  R  E  C  C  C  L  A  L  S  R  C  R  S  W  F  W  V  L  P  S  *  R  D  V  R  P  S  *  E  C  S  C  K  *  A  C  C  C  E  E  W  A  V  H  C  *  S  *  A  S   : G  S  *  *  R  S  S  C  R  E  N  F  C  N  N  G  *  E  W  P  A  G  *  L  C  A  V  R  R  *  *  *  V  *  R  G  H  V  *  D  Y  W  K  C  N  K  *  W  Y  T  F  F  K  H  G  S  V  C  L  H  S  G  T  K  A  K  *  S  H  I  L  S  *  *  H  R  R  S  *  N  H  A  S  C  S  C  R  G  I  H  S  S  S  S  I  R  N  C  N  M  K  L  C  L  E  Y  I  L  F  C  T  S  L  S  A  H  H  N  D  S  T  L  *  S  C  A  K  K  I  S  L  E  L  G  L  T  H  D  A  Y  F  I  I  T  L  K  K  W  K  E  R  Y  C  T  E  F  F  V  R  W  S  V  R  A  S  S  S  *  N  *  P  S  L  L  R  K  N  L  N  S  W  G  *  D  L  T  D  P  K  C  F  N  T  E  K  H  C  S  A  S  W  L  Y  V  *  S  *  H  *  R  G  E  Q  C  Q  M  V  I  F  V  A  F  R  K  Y  I  R  K  R  L  I  E  W  Q  R  Q  I  E  L  L  H  I  F  V  N  P  *  T  G  S  I  H  L  C  C  P  C  *  I  H  T  L  I  Q  V  T  F  T  K  A  T  R  Q  F  L  V  L  H  M  T  R  W  S  N  N  C  Q  R  L  V  T  C  I  V  R  S  T  V  N  R  C  F  F  F  S  F  A  S  F  I  *  G  F  L  L  L  H  L  G  V  R  L  L  L  L  L  G  Y  T  N  L  L  D  S  H  N  C  K  C  Y  R  I  L  P  S  L  F  F  L  V  I  E  F  L  N  *  I  S  *  A  R  T  *  Q  K  K  T  R  *  L  L  I  V  T  S  I  I  L  G  L  S  S  G  S  L  Q  N  K  H  L  I  P  N  I  C  N  I  K  V  E  V  Y  I  *  L  C  E  H  Q  A  A  F  *  F  F  L </second_frame>
            <third_frame>   K  L  M  N  I  D  R  K  S  M  N  K  I  Y  I  H  I  T  Y  I  E  R  E  T  K  S  K  R  D  *  T  L  D  F  I  L  T  E  S  R  V  F  C  I  L  T  N  K  E  L  C  L  H  L  I  F  F  P  S  L  F  I  K  :  F  D  K  Q  E  E  A  I  G  F  W  L  V  G  V  I  Q  S  E  E  V  V  L  *  C  M  W  I  E  F  F  E  E  K  K  S  F  C  L  V  C  F  L  I  *  G  S  A  E  G  V  F  A  N  K  G  L  V  K  M  M  S  K  S  Y  T  N  L  L  D  L  A  S  G  N  F  P  V  M  G  R  E  K  K  R  L  P  R  V  M  T  V  A  G  V  I  S  E  L  D  D  D  Q  A  N  S  V  T  S  D  V  P  S  S  I  I  V  D  R  I  I  I  V  A  N  Q  L  P  V  K  A  K  R  R  S  D  N  K  G  W  N  F  S  W  D  E  D  S  L  L  L  H  I  K  D  G  L  P  D  D  M  E  V  L  Y  V  G  S  L  K  V  E  V  D  S  S  E  Q  D  D  V  S  Q  L  L  L  D  R  F  K  C  V  P  A  F  L  P  P  D  I  L  S  K  Y  Y  H  G  F  C  K  Q  H  L  W  P  L  F  H  Y  M  L  P  Y  S  A  S  H  G  S  R  F  D  R  S  W  W  E  A  Y  V  A  A  N  K  I  F  S  Q  K  V  I  E  V  I  N  P  E  D  D  Y  V  W  I  H  D  Y  H  L  M  V  L  P  T  F  L  R  R  R  F  N  R  L  R  M  G  F  F  L  H  S  P  F  P  S  S  E  I  Y  R  T  L  P  V  R  E  E  I  L  K  A  L  L  N  S  D  L  I  G  F  H  T  F  D  Y  A  R  H  F  L  S  C  C  S  R  M  L  G  L  E  Y  Q  S  K  R  G  Y  I  G  L  E  Y  F  G  R  T  V  G  I  K  I  M  P  V  G  I  H  M  R  Q  I  E  N  V  L  Q  L  A  D  K  E  S  R  V  A  E  L  K  Q  Q  F  E  G  K  T  V  L  L  G  V  D  D  M  D  I  F  K  G  V  D  L  K  L  L  A  L  E  E  M  L  K  Q  H  P  K  W  Q  G  R  A  V  L  V  Q  I  A  N  P  A  R  A  K  G  K  D  I  E  E  I  Q  E  E  I  Q  T  S  V  K  R  I  N  D  K  F  R  Q  P  G  Y  E  P  I  V  F  I  D  R  P  V  S  L  S  E  R  T  A  Y  Y  S  V  A  E  C  V  V  V  T  A  V  R  D  G  M  N  L  T  P  Y  E  Y  V  V  C  R  Q  G  I  P  G  S  E  C  T  A  E  S  N  G  L  K  S  S  M  L  V  V  S  E  F  I  G  C  S  P  S  L  S  G  A  I  R  V  N  P  W  N  V  E  A  T  A  E  A  L  N  E  A  I  S  M  A  D  G  E  K  V  L  R  H  E  K  H  Y  K  Y  V  S  T  H  D  V  A  Y  W  S  R  S  F  F  Q  D  L  E  R  S  C  R  D  H  F  R  R  R  C  W  G  I  G  L  S  F  G  F  R  V  V  A  L  D  P  N  F  K  K  L  S  I  D  T  I  V  S  A  Y  S  R  A  K  N  R  A  I  L  L  D  Y  D  G  T  L  M  P  Q  T  A  I  N  K  V  P  S  P  E  V  I  S  I  I  N  S  L  C  G  D  E  R  N  T  V  F  L  V  S  G  R  G  R  D  S  L  G  Q  W  F  S  P  C  E  K  L  G  I  A  A  E  H  G  Y  F  L  R :   W  S  A  D  K  E  W  E  V  V  G  Q  N  N  D  F  Q  W  M  Q  I  A  E  P  V  M  K  Q  Y  T  E  A  T  D  G  S  S  I  E  T  K  E  S  A  V  V  W  H  Y  R  D  A  D  L  G  F  G  S  C  Q  A  K  E  M  L  D  H  L  E  S  V  L  A  N  E  P  V  A  V  K  S  G  Q  F  I  V  E  V  K  P  Q  :  G  V  S  K  G  L  V  A  E  K  I  F  A  T  M  A  E  S  G  R  Q  A  D  F  V  L  C  V  G  D  D  R  S  D  E  D  M  F  E  I  I  G  N  A  I  N  S  G  I  L  S  S  S  T  E  V  Y  A  C  T  V  G  Q  K  P  S  K  A  T  Y  Y  L  D  D  T  A  E  V  R  T  M  L  H  A  L  A  E  E  S  I  P  P  P  P  S  E  I  V  T  *  S  S  V  W  S  I  S  F  S  V  L  L  *  V  H  T  T  M  T  Q  P  F  E  V  V  Q  R  K  Y  H  *  S  L  D  *  R  M  M  H  I  S  L  L  L  S  K  N  G  R  R  D  I  V  Q  N  S  L  S  D  G  Q  S  E  H  H  Q  A  K  I  S  L  L  F  F  E  R  T  L  T  P  G  V  E  I  *  L  I  P  N  V  L  I  P  R  S  I  A  R  P  A  G  Y  M  C  E  V  D  T  E  G  E  S  S  A  K  W  *  S  S  *  P  S  E  N  I  Y  A  R  D  S  *  N  G  R  G  K  *  S  F  C  T  F  S  L  I  H  E  Q  D  L  Y  I  C  A  A  L  V  E  Y  I  L  L  F  K  L  L  L  R  R  P  H  V  S  F  L  S  C  I  *  Q  D  G  A  T  I  V  K  D  S  *  P  A  L  L  D  Q  L  *  T  G  V  F  S  S  L  L  L  H  L  F  K  D  S  F  F  C  I  *  E  *  G  Y  Y  C  C  W  D  T  P  I  C  W  I  L  I  I  V  N  A  I  E  F  Y  L  L  F  S  S  L  *  *  S  S  *  T  K  F  R  K  L  E  H  D  K  K  K  P  G  D  C  *  *  *  H  Q  L  F  L  V  F  Q  V  V  V  C  R  T  N  I  *  F  L  I  F  V  I  *  R  W  K  F  I  S  S  F  V  S  I  K  L  L  F  N  S  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5782" stop="7805"/>
                    <exon start="7893" stop="8166"/>
                    <exon start="9141" stop="9440"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2595</number_coding_nucleotides>
                  <number_encoded_amino_acids>865</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GSAEGVFANKGLVKMMSKSYTNLLDLASGNFPVMGREKKRLPRVMTVAGVISELDDDQANSVTSDVPSSIIVDRIIIVANQLPVKAKRRSDNKGWNFSWDEDSLLLHIKDGLPDDMEVLYVGSLKVEVDSSEQDDVSQLLLDRFKCVPAFLPPDILSKYYHGFCKQHLWPLFHYMLPYSASHGSRFDRSWWEAYVAANKIFSQKVIEVINPEDDYVWIHDYHLMVLPTFLRRRFNRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNSDLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYFGRTVGIKIMPVGIHMRQIENVLQLADKESRVAELKQQFEGKTVLLGVDDMDIFKGVDLKLLALEEMLKQHPKWQGRAVLVQIANPARAKGKDIEEIQEEIQTSVKRINDKFRQPGYEPIVFIDRPVSLSERTAYYSVAECVVVTAVRDGMNLTPYEYVVCRQGIPGSECTAESNGLKSSMLVVSEFIGCSPSLSGAIRVNPWNVEATAEALNEAISMADGEKVLRHEKHYKYVSTHDVAYWSRSFFQDLERSCRDHFRRRCWGIGLSFGFRVVALDPNFKKLSIDTIVSAYSRAKNRAILLDYDGTLMPQTAINKVPSPEVISIINSLCGDERNTVFLVSGRGRDSLGQWFSPCEKLGIAAEHGYFLRWSADKEWEVVGQNNDFQWMQIAEPVMKQYTEATDGSSIETKESAVVWHYRDADLGFGSCQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQGVSKGLVAEKIFATMAESGRQADFVLCVGDDRSDEDMFEIIGNAINSGILSSSTEVYACTVGQKPSKATYYLDDTAEVRTMLHALAEESIPPPPSEIVT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="8429" e_stop="9163"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="8429" e_stop="9163" e_length="735"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8429" stop="9163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570185" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACATTAAAAGCTGCTTCAATCAAATATATGCAATTTTTTCAAATCTGTCATATTTCATGGAAGTAATTAAAGGTGATGGTTGAAATATTTTTGGAGTTTGGTGTTTAATCTATGAAGATTTTTGGTACTGTAAGCCAAGATAGTGCAACTGTCAGTTTGGACGAAGTCAAACAGATGATAATCACTCAGATGGTGCATGTTAAAATATCTTAATCAATTGCAAGGAGTTTTAGAACAGAAAAAAGTAGACACCTTCTTGTCCTTTTTGGTTCTGTTTGTCATATTGAAGCCATGCATGAGATTTTGCCAAGTTACTGTTGGTTTGATTCATGAATTCTGATAAATTATTACAAACAACTGCAGCAAATAACTTTTTATTCGTTAGATTTATGCCTTGATTAAATAACTAAGTACTTCCAGCATAATGCCAAACAGGTAGGGAATATATTACTCATTTCTTAATAACAAGAACAGAAACAACTACTTTCCTGATACATGTACTTTTCAGTTCTCAACAGAATGTGAGCGCCAGAAAATTTTAGTTAATTATATTGTTGAATAGGATGGCTCGTATGCTTTCCTAAATAGTCTTCTTGTTATAGCTGTATTCTCTTTTCTACCTGTTTTATCTCATACACATCCATGTGGCCTTTTTTGTTTTCTTTTGCCGCCTCGAGTTTATTTTTAACTTTATTTTTTGCATCAATTCCAGGGAGTTAGTAAAGGTCTAGTTGC</gDNA_template>
            <first_frame> T  L  K  A  A  S  I  K  Y  M  Q  F  F  Q  I  C  H  I  S  W  K  *  L  K  V  M  V  E  I  F  L  E  F  G  V  *  S  M  K  I  F  G  T  V  S  Q  D  S  A  T  V  S  L  D  E  V  K  Q  M  I  I  T  Q  M  V  H  V  K  I  S  *  S  I  A  R  S  F  R  T  E  K  S  R  H  L  L  V  L  F  G  S  V  C  H  I  E  A  M  H  E  I  L  P  S  Y  C  W  F  D  S  *  I  L  I  N  Y  Y  K  Q  L  Q  Q  I  T  F  Y  S  L  D  L  C  L  D  *  I  T  K  Y  F  Q  H  N  A  K  Q  V  G  N  I  L  L  I  S  *  *  Q  E  Q  K  Q  L  L  S  *  Y  M  Y  F  S  V  L  N  R  M  *  A  P  E  N  F  S  *  L  Y  C  *  I  G  W  L  V  C  F  P  K  *  S  S  C  Y  S  C  I  L  F  S  T  C  F  I  S  Y  T  S  M  W  P  F  L  F  S  F  A  A  S  S  L  F  L  T  L  F  F  A  S  I  P  G  S  *  *  R  S  S  C </first_frame>
            <second_frame>  H  *  K  L  L  Q  S  N  I  C  N  F  F  K  S  V  I  F  H  G  S  N  *  R  *  W  L  K  Y  F  W  S  L  V  F  N  L  *  R  F  L  V  L  *  A  K  I  V  Q  L  S  V  W  T  K  S  N  R  *  *  S  L  R  W  C  M  L  K  Y  L  N  Q  L  Q  G  V  L  E  Q  K  K  V  D  T  F  L  S  F  L  V  L  F  V  I  L  K  P  C  M  R  F  C  Q  V  T  V  G  L  I  H  E  F  *  *  I  I  T  N  N  C  S  K  *  L  F  I  R  *  I  Y  A  L  I  K  *  L  S  T  S  S  I  M  P  N  R  *  G  I  Y  Y  S  F  L  N  N  K  N  R  N  N  Y  F  P  D  T  C  T  F  Q  F  S  T  E  C  E  R  Q  K  I  L  V  N  Y  I  V  E  *  D  G  S  Y  A  F  L  N  S  L  L  V  I  A  V  F  S  F  L  P  V  L  S  H  T  H  P  C  G  L  F  C  F  L  L  P  P  R  V  Y  F  *  L  Y  F  L  H  Q  F  Q  G  V  S  K  G  L  V   </second_frame>
            <third_frame>   I  K  S  C  F  N  Q  I  Y  A  I  F  S  N  L  S  Y  F  M  E  V  I  K  G  D  G  *  N  I  F  G  V  W  C  L  I  Y  E  D  F  W  Y  C  K  P  R  *  C  N  C  Q  F  G  R  S  Q  T  D  D  N  H  S  D  G  A  C  *  N  I  L  I  N  C  K  E  F  *  N  R  K  K  *  T  P  S  C  P  F  W  F  C  L  S  Y  *  S  H  A  *  D  F  A  K  L  L  L  V  *  F  M  N  S  D  K  L  L  Q  T  T  A  A  N  N  F  L  F  V  R  F  M  P  *  L  N  N  *  V  L  P  A  *  C  Q  T  G  R  E  Y  I  T  H  F  L  I  T  R  T  E  T  T  T  F  L  I  H  V  L  F  S  S  Q  Q  N  V  S  A  R  K  F  *  L  I  I  L  L  N  R  M  A  R  M  L  S  *  I  V  F  L  L  *  L  Y  S  L  F  Y  L  F  Y  L  I  H  I  H  V  A  F  F  V  F  F  C  R  L  E  F  I  F  N  F  I  F  C  I  N  S  R  E  L  V  K  V  *  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0011K05.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="13553" PGL_stop="12524"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13553" e_stop="12524"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="13553" e_stop="12524" e_length="1030"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13553" stop="12524"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571807" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCTTCTTCTCTGTTTGGGAAATTCTTGAAAGCCAAATACCTTCATTTAGTTCATCCCAAAATGGAGTTTTCCTTTTCCGGGAACTTAAACCAGAGGAAACTTGTGAACTCCGGCGAGTTCCCGGAAACAGAGTTCTTCAAAGTTTTCAGCGAGATGGGTCGGCGCGTGTGGCTTTTACATTGCTTAGCATTCTCTTTCGATCAACAAGTTAGCATTTTTCAAGTTCGGAAAAACTCCAGATTCTCAGAGGTCTACATGGAAAGCATCACAGACGAGATTTTCTCCTTCGCCGGCGGCGAATTCAAGGTGGCGTTCACGGTGGTTCCCGGTTTTAAAATCGGTCAAACAGTAGTCCAAAGTCAGGTATATTTATCTCCGGTCACTCCTCCGTCCAAGCACTAATGGGAAATCAAGTAAAAAATCACATCCCCACTCGCTTAAAATCACCACGCGCCGCCTCAATCACAGTGGTAGATCTCCTCTCTCCGGCCGCAGCATGTACATGGTTATCAAACTTCCTTCAATAAAATGGGCTCATCTAAAAACAGAACAGATCACGGTGGCGCGTGAGGTGTACGCGGTACGGATTATATGTGTTGAGAATGTGATGGGCCTTGGTCCAAAAGTATTAAGTGGGCTTTTGGGCCCACATAGTGAAAGTGGTTCAGGGCTGTGAAGTGGATGATTTGGAGTATAGTGAAGAAAAGATTGGGCGGTGAAGACAAAAGGCAAAGTAGGCTCAGTCAGGTAGTGGGCCCAATAAGGCATACGTCTTTGTTTTCTTTGGTATATCACAAAAGTAGAAAGAGGGACCCTTTATCTCTGAATTAAAAAAAAAGAAGAAGAAACTAAAAATGTTGTTTATTCCTCAAATTGTACGTTAAAGAATGACAGACAATATGCCTGCAACTTGCATATCAGATTATATAATGTGTATAAACAATTAGCTAAACTATTACTTAGTATATACATAGTATATATAATGAATATTAGCATTGTGCATGGTATCTTTGCTTTGAATTTTGGATCT</gDNA_template>
            <first_frame> P  S  S  L  F  G  K  F  L  K  A  K  Y  L  H  L  V  H  P  K  M  E  F  S  F  S  G  N  L  N  Q  R  K  L  V  N  S  G  E  F  P  E  T  E  F  F  K  V  F  S  E  M  G  R  R  V  W  L  L  H  C  L  A  F  S  F  D  Q  Q  V  S  I  F  Q  V  R  K  N  S  R  F  S  E  V  Y  M  E  S  I  T  D  E  I  F  S  F  A  G  G  E  F  K  V  A  F  T  V  V  P  G  F  K  I  G  Q  T  V  V  Q  S  Q  V  Y  L  S  P  V  T  P  P  S  K  H  *  W  E  I  K  *  K  I  T  S  P  L  A  *  N  H  H  A  P  P  Q  S  Q  W  *  I  S  S  L  R  P  Q  H  V  H  G  Y  Q  T  S  F  N  K  M  G  S  S  K  N  R  T  D  H  G  G  A  *  G  V  R  G  T  D  Y  M  C  *  E  C  D  G  P  W  S  K  S  I  K  W  A  F  G  P  T  *  *  K  W  F  R  A  V  K  W  M  I  W  S  I  V  K  K  R  L  G  G  E  D  K  R  Q  S  R  L  S  Q  V  V  G  P  I  R  H  T  S  L  F  S  L  V  Y  H  K  S  R  K  R  D  P  L  S  L  N  *  K  K  R  R  R  N  *  K  C  C  L  F  L  K  L  Y  V  K  E  *  Q  T  I  C  L  Q  L  A  Y  Q  I  I  *  C  V  *  T  I  S  *  T  I  T  *  Y  I  H  S  I  Y  N  E  Y  *  H  C  A  W  Y  L  C  F  E  F  W  I  </first_frame>
            <second_frame>  L  L  L  C  L  G  N  S  *  K  P  N  T  F  I  *  F  I  P  K  W  S  F  P  F  P  G  T  *  T  R  G  N  L  *  T  P  A  S  S  R  K  Q  S  S  S  K  F  S  A  R  W  V  G  A  C  G  F  Y  I  A  *  H  S  L  S  I  N  K  L  A  F  F  K  F  G  K  T  P  D  S  Q  R  S  T  W  K  A  S  Q  T  R  F  S  P  S  P  A  A  N  S  R  W  R  S  R  W  F  P  V  L  K  S  V  K  Q  *  S  K  V  R  Y  I  Y  L  R  S  L  L  R  P  S  T  N  G  K  S  S  K  K  S  H  P  H  S  L  K  I  T  T  R  R  L  N  H  S  G  R  S  P  L  S  G  R  S  M  Y  M  V  I  K  L  P  S  I  K  W  A  H  L  K  T  E  Q  I  T  V  A  R  E  V  Y  A  V  R  I  I  C  V  E  N  V  M  G  L  G  P  K  V  L  S  G  L  L  G  P  H  S  E  S  G  S  G  L  *  S  G  *  F  G  V  *  *  R  K  D  W  A  V  K  T  K  G  K  V  G  S  V  R  *  W  A  Q  *  G  I  R  L  C  F  L  W  Y  I  T  K  V  E  R  G  T  L  Y  L  *  I  K  K  K  E  E  E  T  K  N  V  V  Y  S  S  N  C  T  L  K  N  D  R  Q  Y  A  C  N  L  H  I  R  L  Y  N  V  Y  K  Q  L  A  K  L  L  L  S  I  Y  I  V  Y  I  M  N  I  S  I  V  H  G  I  F  A  L  N  F  G  S </second_frame>
            <third_frame>   F  F  S  V  W  E  I  L  E  S  Q  I  P  S  F  S  S  S  Q  N  G  V  F  L  F  R  E  L  K  P  E  E  T  C  E  L  R  R  V  P  G  N  R  V  L  Q  S  F  Q  R  D  G  S  A  R  V  A  F  T  L  L  S  I  L  F  R  S  T  S  *  H  F  S  S  S  E  K  L  Q  I  L  R  G  L  H  G  K  H  H  R  R  D  F  L  L  R  R  R  R  I  Q  G  G  V  H  G  G  S  R  F  *  N  R  S  N  S  S  P  K  S  G  I  F  I  S  G  H  S  S  V  Q  A  L  M  G  N  Q  V  K  N  H  I  P  T  R  L  K  S  P  R  A  A  S  I  T  V  V  D  L  L  S  P  A  A  A  C  T  W  L  S  N  F  L  Q  *  N  G  L  I  *  K  Q  N  R  S  R  W  R  V  R  C  T  R  Y  G  L  Y  V  L  R  M  *  W  A  L  V  Q  K  Y  *  V  G  F  W  A  H  I  V  K  V  V  Q  G  C  E  V  D  D  L  E  Y  S  E  E  K  I  G  R  *  R  Q  K  A  K  *  A  Q  S  G  S  G  P  N  K  A  Y  V  F  V  F  F  G  I  S  Q  K  *  K  E  G  P  F  I  S  E  L  K  K  K  K  K  K  L  K  M  L  F  I  P  Q  I  V  R  *  R  M  T  D  N  M  P  A  T  C  I  S  D  Y  I  M  C  I  N  N  *  L  N  Y  Y  L  V  Y  T  *  Y  I  *  *  I  L  A  L  C  M  V  S  L  L  *  I  L  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13553" stop="13152"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>399</number_coding_nucleotides>
                  <number_encoded_amino_acids>133</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSSLFGKFLKAKYLHLVHPKMEFSFSGNLNQRKLVNSGEFPETEFFKVFSEMGRRVWLLHCLAFSFDQQVSIFQVRKNSRFSEVYMESITDEIFSFAGGEFKVAFTVVPGFKIGQTVVQSQVYLSPVTPPSKH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13201" stop="12878"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>321</number_coding_nucleotides>
                  <number_encoded_amino_acids>107</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKVRYIYLRSLLRPSTNGKSSKKSHPHSLKITTRRLNHSGRSPLSGRSMYMVIKLPSIKWAHLKTEQITVAREVYAVRIICVENVMGLGPKVLSGLLGPHSESGSGL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12727" stop="12524"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKKKEEETKNVVYSSNCTLKNDRQYACNLHIRLYNVYKQLAKLLLSIYIVYIMNISIVHGIFALNFGS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="14771" PGL_stop="13693"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14771" e_stop="13693"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="14771" e_stop="13693" e_length="1079"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14771" stop="13693"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U576406" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTTGGCTTTTACTACCCAACTTCCATTTTTTTCCTTTTATCTTCAACCTTGAATCAAACAAGAGGGACTCTGCTTTTCCCTCCTTTTCTTCTCTGTCCATTTTTTTCTCTCTTTTTTTCCACTTTCTCAGCACACCCTTTTGCTTTCTACCTTCAGTTCACACTTGTCAAGACTCCATATTTTTCATGTCCTAAAAATCACTGATTTTGCTTGCCTACTCTGTTTTACTCTGTTTCAGCAATATCAAAATGGAATCTGTGAGACCAGCTCCGGCTCCTAGTAAAAGCAGGTTAGCTAAGACATTTCAGAGAGTAATCCATCGGAAAAACTCTTCAAAACCATTTTCCAATAATGGGTTTTGCCTACTCATACCTCAAGAAAAGCTTAGGTGCTGTGAGTCGCAGCACTTTGATAAAGAAGAAATTGAAGAGTGTAAAGAACATACCAAAAACAGAGCGGTTATGGAGGCTTTTGTTGCTAAGCTTTTTGCTACAATTTCTTCTGTTAAAGCTGCGTATGCTGAGCTTCAGCTGGCTCAGTTCCCTTATGATAGTGAAGCTATTCAAGTTGCAGATCAAGCTGTGGTGGATGAACTCAAAGCTTTGTCTGAGCTTAAACATAGTTATATCAAAAAACAAATTGATTCTTCACCACCCCATGTAACTTTAATGCTTGCTGAGATTCAAGAACAGCAATCTGTCATGAAAACTTATGAAATCACCATGAAGAAAATGCAGGGAGAAATTGAATCTAAAGGGTACAACATATCTTCTCTACAAAAGGAGCTACAAGAAACCATTCACAACAATAGATCACTCGAAAGAAAGCTCAACGCCAGTGGATCATTCTCCATTCTTGACAATGTCAAATTTTCAGATGTAAATCCTAAAGATTTCATCATGGTTTTACACTACGCCATGAGATCTATCCGAAATTTTGTCAAGTTCTTGATTCGGGAAATGGAGTCTGCAAATTGGGATATTGATGCTGCTACGAAATCTATTCAAAATGGTGTCACTTTCCACAAGAGTAATCATAGGGCTTTTGCGTTTGAGTCTTTTGTTTGCAGAGAGATTTT</gDNA_template>
            <first_frame> S  W  L  L  L  P  N  F  H  F  F  P  F  I  F  N  L  E  S  N  K  R  D  S  A  F  P  S  F  S  S  L  S  I  F  F  S  L  F  F  H  F  L  S  T  P  F  C  F  L  P  S  V  H  T  C  Q  D  S  I  F  F  M  S  *  K  S  L  I  L  L  A  Y  S  V  L  L  C  F  S  N  I  K  M  E  S  V  R  P  A  P  A  P  S  K  S  R  L  A  K  T  F  Q  R  V  I  H  R  K  N  S  S  K  P  F  S  N  N  G  F  C  L  L  I  P  Q  E  K  L  R  C  C  E  S  Q  H  F  D  K  E  E  I  E  E  C  K  E  H  T  K  N  R  A  V  M  E  A  F  V  A  K  L  F  A  T  I  S  S  V  K  A  A  Y  A  E  L  Q  L  A  Q  F  P  Y  D  S  E  A  I  Q  V  A  D  Q  A  V  V  D  E  L  K  A  L  S  E  L  K  H  S  Y  I  K  K  Q  I  D  S  S  P  P  H  V  T  L  M  L  A  E  I  Q  E  Q  Q  S  V  M  K  T  Y  E  I  T  M  K  K  M  Q  G  E  I  E  S  K  G  Y  N  I  S  S  L  Q  K  E  L  Q  E  T  I  H  N  N  R  S  L  E  R  K  L  N  A  S  G  S  F  S  I  L  D  N  V  K  F  S  D  V  N  P  K  D  F  I  M  V  L  H  Y  A  M  R  S  I  R  N  F  V  K  F  L  I  R  E  M  E  S  A  N  W  D  I  D  A  A  T  K  S  I  Q  N  G  V  T  F  H  K  S  N  H  R  A  F  A  F  E  S  F  V  C  R  E  I   </first_frame>
            <second_frame>  L  G  F  Y  Y  P  T  S  I  F  F  L  L  S  S  T  L  N  Q  T  R  G  T  L  L  F  P  P  F  L  L  C  P  F  F  S  L  F  F  S  T  F  S  A  H  P  F  A  F  Y  L  Q  F  T  L  V  K  T  P  Y  F  S  C  P  K  N  H  *  F  C  L  P  T  L  F  Y  S  V  S  A  I  S  K  W  N  L  *  D  Q  L  R  L  L  V  K  A  G  *  L  R  H  F  R  E  *  S  I  G  K  T  L  Q  N  H  F  P  I  M  G  F  A  Y  S  Y  L  K  K  S  L  G  A  V  S  R  S  T  L  I  K  K  K  L  K  S  V  K  N  I  P  K  T  E  R  L  W  R  L  L  L  L  S  F  L  L  Q  F  L  L  L  K  L  R  M  L  S  F  S  W  L  S  S  L  M  I  V  K  L  F  K  L  Q  I  K  L  W  W  M  N  S  K  L  C  L  S  L  N  I  V  I  S  K  N  K  L  I  L  H  H  P  M  *  L  *  C  L  L  R  F  K  N  S  N  L  S  *  K  L  M  K  S  P  *  R  K  C  R  E  K  L  N  L  K  G  T  T  Y  L  L  Y  K  R  S  Y  K  K  P  F  T  T  I  D  H  S  K  E  S  S  T  P  V  D  H  S  P  F  L  T  M  S  N  F  Q  M  *  I  L  K  I  S  S  W  F  Y  T  T  P  *  D  L  S  E  I  L  S  S  S  *  F  G  K  W  S  L  Q  I  G  I  L  M  L  L  R  N  L  F  K  M  V  S  L  S  T  R  V  I  I  G  L  L  R  L  S  L  L  F  A  E  R  F  </second_frame>
            <third_frame>   L  A  F  T  T  Q  L  P  F  F  S  F  Y  L  Q  P  *  I  K  Q  E  G  L  C  F  S  L  L  F  F  S  V  H  F  F  L  S  F  F  P  L  S  Q  H  T  L  L  L  S  T  F  S  S  H  L  S  R  L  H  I  F  H  V  L  K  I  T  D  F  A  C  L  L  C  F  T  L  F  Q  Q  Y  Q  N  G  I  C  E  T  S  S  G  S  *  *  K  Q  V  S  *  D  I  S  E  S  N  P  S  E  K  L  F  K  T  I  F  Q  *  W  V  L  P  T  H  T  S  R  K  A  *  V  L  *  V  A  A  L  *  *  R  R  N  *  R  V  *  R  T  Y  Q  K  Q  S  G  Y  G  G  F  C  C  *  A  F  C  Y  N  F  F  C  *  S  C  V  C  *  A  S  A  G  S  V  P  L  *  *  *  S  Y  S  S  C  R  S  S  C  G  G  *  T  Q  S  F  V  *  A  *  T  *  L  Y  Q  K  T  N  *  F  F  T  T  P  C  N  F  N  A  C  *  D  S  R  T  A  I  C  H  E  N  L  *  N  H  H  E  E  N  A  G  R  N  *  I  *  R  V  Q  H  I  F  S  T  K  G  A  T  R  N  H  S  Q  Q  *  I  T  R  K  K  A  Q  R  Q  W  I  I  L  H  S  *  Q  C  Q  I  F  R  C  K  S  *  R  F  H  H  G  F  T  L  R  H  E  I  Y  P  K  F  C  Q  V  L  D  S  G  N  G  V  C  K  L  G  Y  *  C  C  Y  E  I  Y  S  K  W  C  H  F  P  Q  E  *  S  *  G  F  C  V  *  V  F  C  L  Q  R  D  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14576" stop="13695"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>882</number_coding_nucleotides>
                  <number_encoded_amino_acids>294</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSLILLAYSVLLCFSNIKMESVRPAPAPSKSRLAKTFQRVIHRKNSSKPFSNNGFCLLIPQEKLRCCESQHFDKEEIEECKEHTKNRAVMEAFVAKLFATISSVKAAYAELQLAQFPYDSEAIQVADQAVVDELKALSELKHSYIKKQIDSSPPHVTLMLAEIQEQQSVMKTYEITMKKMQGEIESKGYNISSLQKELQETIHNNRSLERKLNASGSFSILDNVKFSDVNPKDFIMVLHYAMRSIRNFVKFLIREMESANWDIDAATKSIQNGVTFHKSNHRAFAFESFVCREI</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14770" stop="14567"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LGFYYPTSIFFLLSSTLNQTRGTLLFPPFLLCPFFSLFFSTFSAHPFAFYLQFTLVKTPYFSCPKNH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="33639" PGL_stop="28926"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33639" e_stop="33472"/>
            <exon e_start="32225" e_stop="31858"/>
            <exon e_start="31347" e_stop="31120"/>
            <exon e_start="31030" e_stop="30676"/>
            <exon e_start="30565" e_stop="30441"/>
            <exon e_start="30306" e_stop="30171"/>
            <exon e_start="29396" e_stop="28926"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.895" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.565" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.897" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="33639" e_stop="33472" e_length="168"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="1.000">
            <gDNA_intron_boundary i_start="33471" i_stop="32226" i_length="1246"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="32225" e_stop="31858" e_length="368"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.966">
            <gDNA_intron_boundary i_start="31857" i_stop="31348" i_length="510"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="31347" e_stop="31120" e_length="228"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.966">
            <gDNA_intron_boundary i_start="31119" i_stop="31031" i_length="89"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="31030" e_stop="30676" e_length="355"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.895">
            <gDNA_intron_boundary i_start="30675" i_stop="30566" i_length="110"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="30565" e_stop="30441" e_length="125"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.565">
            <gDNA_intron_boundary i_start="30440" i_stop="30307" i_length="134"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="30306" e_stop="30171" e_length="136"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.897">
            <gDNA_intron_boundary i_start="30170" i_stop="29397" i_length="774"/>
          </intron>
          <exon e_serial="7" e_score="0.996">
            <gDNA_exon_boundary e_start="29396" e_stop="28926" e_length="471"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33639" stop="33472"/>
              <exon start="32225" stop="31858"/>
              <exon start="31347" stop="31120"/>
              <exon start="31030" stop="30676"/>
              <exon start="30565" stop="30441"/>
              <exon start="30306" stop="30171"/>
              <exon start="29396" stop="28926"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579118" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31150" stop="31120"/>
              <exon start="31030" stop="30715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U593629" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTCTCCATCTCTGTTAACTGGTGACGCTTACACATAAATCCGTCAGATCCGCCCCTTCTCTCCCTCTCCTCTCTCTCATGGTCAAAACCCTACAAATAGAAGCATAGCTCGACGGAGAAATCGAGCGAATAACAGTCCACGGACATCTCCAGATCGTCGCTACCTCT : AGATAGTTCTGTTAATAGTGAACAATGGGAGGAGGATTCAGAGTGCTGCACCTTGTGAAACCATTTCTTTCTTTTCTACCTGAAGTTCAGAGTGCTGACAGGAAGGTTCAATTCAAAGAGAAGGTCATCTATACTGTAATTGCGCTTGCTATTTTTCTGGTTTGCAGTCAGCTCCCTCTTTATGGCATACACTCTACAACTGGCGCGGATCCTTTTTACTGGATGCGTGTCATTCTTGCCTCAAACCGTGGTACAGTCATGGAACTTGGAATTACTCCAATTGTGACTTCTGGAATGGTGATGCAATTGTTAGCTGGATCAAAAATCATTCAAGTGGACAACAATGTTCGGGAGGACCGAGCACTCCT : TAATGGTGCTCAAAAGCTATTGGGTATCCTGATTGCTGTCGGTGAGGCAGTTGCTTATGTCCTGTCGGGGATGTATGGCAGTGTTAGCCAATTGGGTGTTGGAAATGCTATCCTCATTATCCTCCAACTCTGCTTTGCTGCTATCATTGTCATGTGCTTAGATGAACTTCTTCAGAAAGGATATGGTCTTGGCTCTGGAATTTCCTTGTTCATAGCTACCAATATCTG : TGAAAGCATTATCTGGAAAGCATTTAGTCCCACAACCATCAATACCGGGCGTGGTGCTGAATTTGAAGGAGCTATAATTGCTCTGTTCCATCTTACTATTACTAGATCTAATAGGATTAGTGCCTTGCGTGAGGCTTTCTACCGGCAAAGTCTCCCCAATGTGACAAATCTGCTTGCAACTGTGTTGATCTTCCTCATCGTTATCTACTTCCAAGGATTCCGTGTAGTTTTACCTGTTAGATCTAAGAATGCTCGTGGACAGCAAGGTTCTTACCCAATTAAACTCTTCTACACCTCAAACATGCCTATTATTTTGCAGTCCGCACTTGTCTCAAACCTGTATTTCATCTCTCAG : TTGCTCTACAGGAGATATGGAGGAAATTTCATCGTGGATATGATAGGAACTTGGAAAGAATCTGAATATTCTGGACAATCTGTTCCTGTTGCTGGTCTTGCTTACCTTGTCACTGCGCCATCAAG : CTTGGCAGAAATGGTGTCGCATCCGTTCCATGCTCTTTTCTATATAGTGTTCATGTTATCAGCCTGTGCCCTGTTCTCAAAGACCTGGATTGAAGTTTCTGGATCGTCTGCCAGAGATGTTGCCAAACAGCTCAAG : GAGCAACAAATGGTGATGCCTGGTCATCGTGATTCCAACCTGCAGAAGGAACTAAATCGTTACATACCTACTGCAGCTGCCTTTGGAGGAGTTTGCATTGGTGCATTGACAGTTTTGGCAGACTTGATGGGAGCGATTGGATCAGGAACTGGAATCCTTCTTGCAGTCACAATCATTTACCAGTATTTTGAGACATTCGAGAAGGAGAAGGCCACTGAACTAGGCATGTTTGGTTTGTAGGCTGTAGCGTTTATGCTAGAATGTCCCTCCAAGCCAAGAGAGCAATGTAGTGAACTTGTTGGCTTATAATGGATAGATATTAGAGGCCACAAGTTTTTCCTGTTAAATTTTGTAAGTTTTTTTTTTTGTTTTTAACTGTGCTGATGAGCGCCCGAATGTTTTACATGAAAAGACTAGGTTAATTTACAGAAATTCTCAAAGGATATTTTACATGATACAAGCATCGAGCAC</gDNA_template>
            <first_frame> V  L  H  L  C  *  L  V  T  L  T  H  K  S  V  R  S  A  P  S  L  P  L  L  S  L  M  V  K  T  L  Q  I  E  A  *  L  D  G  E  I  E  R  I  T  V  H  G  H  L  Q  I  V  A  T  S  :  R  *  F  C  *  *  *  T  M  G  G  G  F  R  V  L  H  L  V  K  P  F  L  S  F  L  P  E  V  Q  S  A  D  R  K  V  Q  F  K  E  K  V  I  Y  T  V  I  A  L  A  I  F  L  V  C  S  Q  L  P  L  Y  G  I  H  S  T  T  G  A  D  P  F  Y  W  M  R  V  I  L  A  S  N  R  G  T  V  M  E  L  G  I  T  P  I  V  T  S  G  M  V  M  Q  L  L  A  G  S  K  I  I  Q  V  D  N  N  V  R  E  D  R  A  L  L :   N  G  A  Q  K  L  L  G  I  L  I  A  V  G  E  A  V  A  Y  V  L  S  G  M  Y  G  S  V  S  Q  L  G  V  G  N  A  I  L  I  I  L  Q  L  C  F  A  A  I  I  V  M  C  L  D  E  L  L  Q  K  G  Y  G  L  G  S  G  I  S  L  F  I  A  T  N  I  C :   E  S  I  I  W  K  A  F  S  P  T  T  I  N  T  G  R  G  A  E  F  E  G  A  I  I  A  L  F  H  L  T  I  T  R  S  N  R  I  S  A  L  R  E  A  F  Y  R  Q  S  L  P  N  V  T  N  L  L  A  T  V  L  I  F  L  I  V  I  Y  F  Q  G  F  R  V  V  L  P  V  R  S  K  N  A  R  G  Q  Q  G  S  Y  P  I  K  L  F  Y  T  S  N  M  P  I  I  L  Q  S  A  L  V  S  N  L  Y  F  I  S  Q  :  L  L  Y  R  R  Y  G  G  N  F  I  V  D  M  I  G  T  W  K  E  S  E  Y  S  G  Q  S  V  P  V  A  G  L  A  Y  L  V  T  A  P  S  S :   L  A  E  M  V  S  H  P  F  H  A  L  F  Y  I  V  F  M  L  S  A  C  A  L  F  S  K  T  W  I  E  V  S  G  S  S  A  R  D  V  A  K  Q  L  K  :  E  Q  Q  M  V  M  P  G  H  R  D  S  N  L  Q  K  E  L  N  R  Y  I  P  T  A  A  A  F  G  G  V  C  I  G  A  L  T  V  L  A  D  L  M  G  A  I  G  S  G  T  G  I  L  L  A  V  T  I  I  Y  Q  Y  F  E  T  F  E  K  E  K  A  T  E  L  G  M  F  G  L  *  A  V  A  F  M  L  E  C  P  S  K  P  R  E  Q  C  S  E  L  V  G  L  *  W  I  D  I  R  G  H  K  F  F  L  L  N  F  V  S  F  F  F  C  F  *  L  C  *  *  A  P  E  C  F  T  *  K  D  *  V  N  L  Q  K  F  S  K  D  I  L  H  D  T  S  I  E  H </first_frame>
            <second_frame>  F  S  I  S  V  N  W  *  R  L  H  I  N  P  S  D  P  P  L  L  S  L  S  S  L  S  W  S  K  P  Y  K  *  K  H  S  S  T  E  K  S  S  E  *  Q  S  T  D  I  S  R  S  S  L  P  L :   D  S  S  V  N  S  E  Q  W  E  E  D  S  E  C  C  T  L  *  N  H  F  F  L  F  Y  L  K  F  R  V  L  T  G  R  F  N  S  K  R  R  S  S  I  L  *  L  R  L  L  F  F  W  F  A  V  S  S  L  F  M  A  Y  T  L  Q  L  A  R  I  L  F  T  G  C  V  S  F  L  P  Q  T  V  V  Q  S  W  N  L  E  L  L  Q  L  *  L  L  E  W  *  C  N  C  *  L  D  Q  K  S  F  K  W  T  T  M  F  G  R  T  E  H  S   : L  M  V  L  K  S  Y  W  V  S  *  L  L  S  V  R  Q  L  L  M  S  C  R  G  C  M  A  V  L  A  N  W  V  L  E  M  L  S  S  L  S  S  N  S  A  L  L  L  S  L  S  C  A  *  M  N  F  F  R  K  D  M  V  L  A  L  E  F  P  C  S  *  L  P  I  S   : V  K  A  L  S  G  K  H  L  V  P  Q  P  S  I  P  G  V  V  L  N  L  K  E  L  *  L  L  C  S  I  L  L  L  L  D  L  I  G  L  V  P  C  V  R  L  S  T  G  K  V  S  P  M  *  Q  I  C  L  Q  L  C  *  S  S  S  S  L  S  T  S  K  D  S  V  *  F  Y  L  L  D  L  R  M  L  V  D  S  K  V  L  T  Q  L  N  S  S  T  P  Q  T  C  L  L  F  C  S  P  H  L  S  Q  T  C  I  S  S  L  S :   C  S  T  G  D  M  E  E  I  S  S  W  I  *  *  E  L  G  K  N  L  N  I  L  D  N  L  F  L  L  L  V  L  L  T  L  S  L  R  H  Q   : A  W  Q  K  W  C  R  I  R  S  M  L  F  S  I  *  C  S  C  Y  Q  P  V  P  C  S  Q  R  P  G  L  K  F  L  D  R  L  P  E  M  L  P  N  S  S  R :   S  N  K  W  *  C  L  V  I  V  I  P  T  C  R  R  N  *  I  V  T  Y  L  L  Q  L  P  L  E  E  F  A  L  V  H  *  Q  F  W  Q  T  *  W  E  R  L  D  Q  E  L  E  S  F  L  Q  S  Q  S  F  T  S  I  L  R  H  S  R  R  R  R  P  L  N  *  A  C  L  V  C  R  L  *  R  L  C  *  N  V  P  P  S  Q  E  S  N  V  V  N  L  L  A  Y  N  G  *  I  L  E  A  T  S  F  S  C  *  I  L  *  V  F  F  F  V  F  N  C  A  D  E  R  P  N  V  L  H  E  K  T  R  L  I  Y  R  N  S  Q  R  I  F  Y  M  I  Q  A  S  S   </second_frame>
            <third_frame>   S  P  S  L  L  T  G  D  A  Y  T  *  I  R  Q  I  R  P  F  S  P  S  P  L  S  H  G  Q  N  P  T  N  R  S  I  A  R  R  R  N  R  A  N  N  S  P  R  T  S  P  D  R  R  Y  L   : *  I  V  L  L  I  V  N  N  G  R  R  I  Q  S  A  A  P  C  E  T  I  S  F  F  S  T  *  S  S  E  C  *  Q  E  G  S  I  Q  R  E  G  H  L  Y  C  N  C  A  C  Y  F  S  G  L  Q  S  A  P  S  L  W  H  T  L  Y  N  W  R  G  S  F  L  L  D  A  C  H  S  C  L  K  P  W  Y  S  H  G  T  W  N  Y  S  N  C  D  F  W  N  G  D  A  I  V  S  W  I  K  N  H  S  S  G  Q  Q  C  S  G  G  P  S  T  P  :  *  W  C  S  K  A  I  G  Y  P  D  C  C  R  *  G  S  C  L  C  P  V  G  D  V  W  Q  C  *  P  I  G  C  W  K  C  Y  P  H  Y  P  P  T  L  L  C  C  Y  H  C  H  V  L  R  *  T  S  S  E  R  I  W  S  W  L  W  N  F  L  V  H  S  Y  Q  Y  L  :  *  K  H  Y  L  E  S  I  *  S  H  N  H  Q  Y  R  A  W  C  *  I  *  R  S  Y  N  C  S  V  P  S  Y  Y  Y  *  I  *  *  D  *  C  L  A  *  G  F  L  P  A  K  S  P  Q  C  D  K  S  A  C  N  C  V  D  L  P  H  R  Y  L  L  P  R  I  P  C  S  F  T  C  *  I  *  E  C  S  W  T  A  R  F  L  P  N  *  T  L  L  H  L  K  H  A  Y  Y  F  A  V  R  T  C  L  K  P  V  F  H  L  S   : V  A  L  Q  E  I  W  R  K  F  H  R  G  Y  D  R  N  L  E  R  I  *  I  F  W  T  I  C  S  C  C  W  S  C  L  P  C  H  C  A  I  K  :  L  G  R  N  G  V  A  S  V  P  C  S  F  L  Y  S  V  H  V  I  S  L  C  P  V  L  K  D  L  D  *  S  F  W  I  V  C  Q  R  C  C  Q  T  A  Q   : G  A  T  N  G  D  A  W  S  S  *  F  Q  P  A  E  G  T  K  S  L  H  T  Y  C  S  C  L  W  R  S  L  H  W  C  I  D  S  F  G  R  L  D  G  S  D  W  I  R  N  W  N  P  S  C  S  H  N  H  L  P  V  F  *  D  I  R  E  G  E  G  H  *  T  R  H  V  W  F  V  G  C  S  V  Y  A  R  M  S  L  Q  A  K  R  A  M  *  *  T  C  W  L  I  M  D  R  Y  *  R  P  Q  V  F  P  V  K  F  C  K  F  F  F  L  F  L  T  V  L  M  S  A  R  M  F  Y  M  K  R  L  G  *  F  T  E  I  L  K  G  Y  F  T  *  Y  K  H  R  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32204" stop="31858"/>
                    <exon start="31347" stop="31120"/>
                    <exon start="31030" stop="30676"/>
                    <exon start="30565" stop="30441"/>
                    <exon start="30306" stop="30171"/>
                    <exon start="29396" stop="29157"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1428</number_coding_nucleotides>
                  <number_encoded_amino_acids>476</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMGGGFRVLHLVKPFLSFLPEVQSADRKVQFKEKVIYTVIALAIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGMVMQLLAGSKIIQVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVSQLGVGNAILIILQLCFAAIIVMCLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINTGRGAEFEGAIIALFHLTITRSNRISALREAFYRQSLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSNLYFISQLLYRRYGGNFIVDMIGTWKESEYSGQSVPVAGLAYLVTAPSSLAEMVSHPFHALFYIVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRDSNLQKELNRYIPTAAAFGGVCIGALTVLADLMGAIGSGTGILLAVTIIYQYFETFEKEKATELGMFGL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="33575" e_stop="33472"/>
            <exon e_start="32225" e_stop="31858"/>
            <exon e_start="31347" e_stop="31296"/>
            <exon e_start="31211" e_stop="31120"/>
            <exon e_start="31030" e_stop="30715"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="1.000" e_score="0.942"/>
          <exon-intron don_prob="1.000" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.966" e_score="1.000"/>
          <exon-only e_score="0.911"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.942">
            <gDNA_exon_boundary e_start="33575" e_stop="33472" e_length="104"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="1.000">
            <gDNA_intron_boundary i_start="33471" i_stop="32226" i_length="1246"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="32225" e_stop="31858" e_length="368"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.966">
            <gDNA_intron_boundary i_start="31857" i_stop="31348" i_length="510"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="31347" e_stop="31296" e_length="52"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="31295" i_stop="31212" i_length="84"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="31211" e_stop="31120" e_length="92"/>
          </exon>
          <intron i_serial="4" don_prob="0.993" acc_prob="0.966">
            <gDNA_intron_boundary i_start="31119" i_stop="31031" i_length="89"/>
          </intron>
          <exon e_serial="5" e_score="0.911">
            <gDNA_exon_boundary e_start="31030" e_stop="30715" e_length="316"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33575" stop="33472"/>
              <exon start="32225" stop="31858"/>
              <exon start="31347" stop="31296"/>
              <exon start="31211" stop="31120"/>
              <exon start="31030" stop="30778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U592024" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31150" stop="31120"/>
              <exon start="31030" stop="30715"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U593629" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCTCCTCTCTCTCATGGTCAAAACCCTACAAATAGAAGCATAGCTCGACGGAGAAATCGAGCGAATAACAGTCCACGGACATCTCCAGATCGTCGCTACCTCT : AGATAGTTCTGTTAATAGTGAACAATGGGAGGAGGATTCAGAGTGCTGCACCTTGTGAAACCATTTCTTTCTTTTCTACCTGAAGTTCAGAGTGCTGACAGGAAGGTTCAATTCAAAGAGAAGGTCATCTATACTGTAATTGCGCTTGCTATTTTTCTGGTTTGCAGTCAGCTCCCTCTTTATGGCATACACTCTACAACTGGCGCGGATCCTTTTTACTGGATGCGTGTCATTCTTGCCTCAAACCGTGGTACAGTCATGGAACTTGGAATTACTCCAATTGTGACTTCTGGAATGGTGATGCAATTGTTAGCTGGATCAAAAATCATTCAAGTGGACAACAATGTTCGGGAGGACCGAGCACTCCT : TAATGGTGCTCAAAAGCTATTGGGTATCCTGATTGCTGTCGGTGAGGCAGTT : GCTGCTATCATTGTCATGTGCTTAGATGAACTTCTTCAGAAAGGATATGGTCTTGGCTCTGGAATTTCCTTGTTCATAGCTACCAATATCTG : TGAAAGCATTATCTGGAAAGCATTTAGTCCCACAACCATCAATACCGGGCGTGGTGCTGAATTTGAAGGAGCTATAATTGCTCTGTTCCATCTTACTATTACTAGATCTAATAGGATTAGTGCCTTGCGTGAGGCTTTCTACCGGCAAAGTCTCCCCAATGTGACAAATCTGCTTGCAACTGTGTTGATCTTCCTCATCGTTATCTACTTCCAAGGATTCCGTGTAGTTTTACCTGTTAGATCTAAGAATGCTCGTGGACAGCAAGGTTCTTACCCAATTAAACTCTTCTACACCTCAAACATGCCTATTATTTTG</gDNA_template>
            <first_frame> L  S  S  L  S  W  S  K  P  Y  K  *  K  H  S  S  T  E  K  S  S  E  *  Q  S  T  D  I  S  R  S  S  L  P  L :   D  S  S  V  N  S  E  Q  W  E  E  D  S  E  C  C  T  L  *  N  H  F  F  L  F  Y  L  K  F  R  V  L  T  G  R  F  N  S  K  R  R  S  S  I  L  *  L  R  L  L  F  F  W  F  A  V  S  S  L  F  M  A  Y  T  L  Q  L  A  R  I  L  F  T  G  C  V  S  F  L  P  Q  T  V  V  Q  S  W  N  L  E  L  L  Q  L  *  L  L  E  W  *  C  N  C  *  L  D  Q  K  S  F  K  W  T  T  M  F  G  R  T  E  H  S   : L  M  V  L  K  S  Y  W  V  S  *  L  L  S  V  R  Q  L :   L  L  S  L  S  C  A  *  M  N  F  F  R  K  D  M  V  L  A  L  E  F  P  C  S  *  L  P  I  S   : V  K  A  L  S  G  K  H  L  V  P  Q  P  S  I  P  G  V  V  L  N  L  K  E  L  *  L  L  C  S  I  L  L  L  L  D  L  I  G  L  V  P  C  V  R  L  S  T  G  K  V  S  P  M  *  Q  I  C  L  Q  L  C  *  S  S  S  S  L  S  T  S  K  D  S  V  *  F  Y  L  L  D  L  R  M  L  V  D  S  K  V  L  T  Q  L  N  S  S  T  P  Q  T  C  L  L  F   </first_frame>
            <second_frame>  S  P  L  S  H  G  Q  N  P  T  N  R  S  I  A  R  R  R  N  R  A  N  N  S  P  R  T  S  P  D  R  R  Y  L   : *  I  V  L  L  I  V  N  N  G  R  R  I  Q  S  A  A  P  C  E  T  I  S  F  F  S  T  *  S  S  E  C  *  Q  E  G  S  I  Q  R  E  G  H  L  Y  C  N  C  A  C  Y  F  S  G  L  Q  S  A  P  S  L  W  H  T  L  Y  N  W  R  G  S  F  L  L  D  A  C  H  S  C  L  K  P  W  Y  S  H  G  T  W  N  Y  S  N  C  D  F  W  N  G  D  A  I  V  S  W  I  K  N  H  S  S  G  Q  Q  C  S  G  G  P  S  T  P  :  *  W  C  S  K  A  I  G  Y  P  D  C  C  R  *  G  S   : C  C  Y  H  C  H  V  L  R  *  T  S  S  E  R  I  W  S  W  L  W  N  F  L  V  H  S  Y  Q  Y  L  :  *  K  H  Y  L  E  S  I  *  S  H  N  H  Q  Y  R  A  W  C  *  I  *  R  S  Y  N  C  S  V  P  S  Y  Y  Y  *  I  *  *  D  *  C  L  A  *  G  F  L  P  A  K  S  P  Q  C  D  K  S  A  C  N  C  V  D  L  P  H  R  Y  L  L  P  R  I  P  C  S  F  T  C  *  I  *  E  C  S  W  T  A  R  F  L  P  N  *  T  L  L  H  L  K  H  A  Y  Y  F  </second_frame>
            <third_frame>   L  L  S  L  M  V  K  T  L  Q  I  E  A  *  L  D  G  E  I  E  R  I  T  V  H  G  H  L  Q  I  V  A  T  S  :  R  *  F  C  *  *  *  T  M  G  G  G  F  R  V  L  H  L  V  K  P  F  L  S  F  L  P  E  V  Q  S  A  D  R  K  V  Q  F  K  E  K  V  I  Y  T  V  I  A  L  A  I  F  L  V  C  S  Q  L  P  L  Y  G  I  H  S  T  T  G  A  D  P  F  Y  W  M  R  V  I  L  A  S  N  R  G  T  V  M  E  L  G  I  T  P  I  V  T  S  G  M  V  M  Q  L  L  A  G  S  K  I  I  Q  V  D  N  N  V  R  E  D  R  A  L  L :   N  G  A  Q  K  L  L  G  I  L  I  A  V  G  E  A  V  :  A  A  I  I  V  M  C  L  D  E  L  L  Q  K  G  Y  G  L  G  S  G  I  S  L  F  I  A  T  N  I  C :   E  S  I  I  W  K  A  F  S  P  T  T  I  N  T  G  R  G  A  E  F  E  G  A  I  I  A  L  F  H  L  T  I  T  R  S  N  R  I  S  A  L  R  E  A  F  Y  R  Q  S  L  P  N  V  T  N  L  L  A  T  V  L  I  F  L  I  V  I  Y  F  Q  G  F  R  V  V  L  P  V  R  S  K  N  A  R  G  Q  Q  G  S  Y  P  I  K  L  F  Y  T  S  N  M  P  I  I  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32204" stop="31858"/>
                    <exon start="31347" stop="31296"/>
                    <exon start="31211" stop="31120"/>
                    <exon start="31030" stop="30715"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>807</number_coding_nucleotides>
                  <number_encoded_amino_acids>269</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMGGGFRVLHLVKPFLSFLPEVQSADRKVQFKEKVIYTVIALAIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGMVMQLLAGSKIIQVDNNVREDRALLNGAQKLLGILIAVGEAVAAIIVMCLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINTGRGAEFEGAIIALFHLTITRSNRISALREAFYRQSLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIIL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="32074" e_stop="31858"/>
            <exon e_start="31347" e_stop="31149"/>
            <exon e_start="31013" e_stop="30716"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="32074" e_stop="31858" e_length="217"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.966">
            <gDNA_intron_boundary i_start="31857" i_stop="31348" i_length="510"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="31347" e_stop="31149" e_length="199"/>
          </exon>
          <intron i_serial="2" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="31148" i_stop="31014" i_length="135"/>
          </intron>
          <exon e_serial="3" e_score="0.997">
            <gDNA_exon_boundary e_start="31013" e_stop="30716" e_length="298"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32074" stop="31858"/>
              <exon start="31347" stop="31149"/>
              <exon start="31013" stop="30716"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591577" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTTCTGGTTTGCAGTCAGCTCCCTCTTTATGGCATACACTCTACAACTGGCGCGGATCCTTTTTACTGGATGCGTGTCATTCTTGCCTCAAACCGTGGTACAGTCATGGAACTTGGAATTACTCCAATTGTGACTTCTGGAATGGTGATGCAATTGTTAGCTGGATCAAAAATCATTCAAGTGGACAACAATGTTCGGGAGGACCGAGCACTCCT : TAATGGTGCTCAAAAGCTATTGGGTATCCTGATTGCTGTCGGTGAGGCAGTTGCTTATGTCCTGTCGGGGATGTATGGCAGTGTTAGCCAATTGGGTGTTGGAAATGCTATCCTCATTATCCTCCAACTCTGCTTTGCTGCTATCATTGTCATGTGCTTAGATGAACTTCTTCAGAAAGGATATGGTCTTGGCTCTGGA : AAGCATTTAGTCCCACAACCATCAATACCGGGCGTGGTGCTGAATTTGAAGGAGCTATAATTGCTCTGTTCCATCTTACTATTACTAGATCTAATAGGATTAGTGCCTTGCGTGAGGCTTTCTACCGGCAAAGTCTCCCCAATGTGACAAATCTGCTTGCAACTGTGTTGATCTTCCTCATCGTTATCTACTTCCAAGGATTCCGTGTAGTTTTACCTGTTAGATCTAAGAATGCTCGTGGACAGCAAGGTTCTTACCCAATTAAACTCTTCTACACCTCAAACATGCCTATTATTTT</gDNA_template>
            <first_frame> F  F  W  F  A  V  S  S  L  F  M  A  Y  T  L  Q  L  A  R  I  L  F  T  G  C  V  S  F  L  P  Q  T  V  V  Q  S  W  N  L  E  L  L  Q  L  *  L  L  E  W  *  C  N  C  *  L  D  Q  K  S  F  K  W  T  T  M  F  G  R  T  E  H  S   : L  M  V  L  K  S  Y  W  V  S  *  L  L  S  V  R  Q  L  L  M  S  C  R  G  C  M  A  V  L  A  N  W  V  L  E  M  L  S  S  L  S  S  N  S  A  L  L  L  S  L  S  C  A  *  M  N  F  F  R  K  D  M  V  L  A  L  E :   S  I  *  S  H  N  H  Q  Y  R  A  W  C  *  I  *  R  S  Y  N  C  S  V  P  S  Y  Y  Y  *  I  *  *  D  *  C  L  A  *  G  F  L  P  A  K  S  P  Q  C  D  K  S  A  C  N  C  V  D  L  P  H  R  Y  L  L  P  R  I  P  C  S  F  T  C  *  I  *  E  C  S  W  T  A  R  F  L  P  N  *  T  L  L  H  L  K  H  A  Y  Y  F </first_frame>
            <second_frame>  F  S  G  L  Q  S  A  P  S  L  W  H  T  L  Y  N  W  R  G  S  F  L  L  D  A  C  H  S  C  L  K  P  W  Y  S  H  G  T  W  N  Y  S  N  C  D  F  W  N  G  D  A  I  V  S  W  I  K  N  H  S  S  G  Q  Q  C  S  G  G  P  S  T  P  :  *  W  C  S  K  A  I  G  Y  P  D  C  C  R  *  G  S  C  L  C  P  V  G  D  V  W  Q  C  *  P  I  G  C  W  K  C  Y  P  H  Y  P  P  T  L  L  C  C  Y  H  C  H  V  L  R  *  T  S  S  E  R  I  W  S  W  L  W   : K  A  F  S  P  T  T  I  N  T  G  R  G  A  E  F  E  G  A  I  I  A  L  F  H  L  T  I  T  R  S  N  R  I  S  A  L  R  E  A  F  Y  R  Q  S  L  P  N  V  T  N  L  L  A  T  V  L  I  F  L  I  V  I  Y  F  Q  G  F  R  V  V  L  P  V  R  S  K  N  A  R  G  Q  Q  G  S  Y  P  I  K  L  F  Y  T  S  N  M  P  I  I   </second_frame>
            <third_frame>   F  L  V  C  S  Q  L  P  L  Y  G  I  H  S  T  T  G  A  D  P  F  Y  W  M  R  V  I  L  A  S  N  R  G  T  V  M  E  L  G  I  T  P  I  V  T  S  G  M  V  M  Q  L  L  A  G  S  K  I  I  Q  V  D  N  N  V  R  E  D  R  A  L  L :   N  G  A  Q  K  L  L  G  I  L  I  A  V  G  E  A  V  A  Y  V  L  S  G  M  Y  G  S  V  S  Q  L  G  V  G  N  A  I  L  I  I  L  Q  L  C  F  A  A  I  I  V  M  C  L  D  E  L  L  Q  K  G  Y  G  L  G  S  G  :  K  H  L  V  P  Q  P  S  I  P  G  V  V  L  N  L  K  E  L  *  L  L  C  S  I  L  L  L  L  D  L  I  G  L  V  P  C  V  R  L  S  T  G  K  V  S  P  M  *  Q  I  C  L  Q  L  C  *  S  S  S  S  L  S  T  S  K  D  S  V  *  F  Y  L  L  D  L  R  M  L  V  D  S  K  V  L  T  Q  L  N  S  S  T  P  Q  T  C  L  L  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="32072" stop="31858"/>
                    <exon start="31347" stop="31149"/>
                    <exon start="31013" stop="30954"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>471</number_coding_nucleotides>
                  <number_encoded_amino_acids>157</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPIVTSGMVMQLLAGSKIIQVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVSQLGVGNAILIILQLCFAAIIVMCLDELLQKGYGLGSGKHLVPQPSIPGVVLNLKEL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="36086" PGL_stop="42811"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36086" e_stop="36294"/>
            <exon e_start="37311" e_stop="37576"/>
            <exon e_start="39243" e_stop="39358"/>
            <exon e_start="42781" e_stop="42811"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.973" acc_prob="0.805" e_score="0.995"/>
          <exon-intron don_prob="0.985" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.982" e_score="0.957"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="36086" e_stop="36294" e_length="209"/>
          </exon>
          <intron i_serial="1" don_prob="0.973" acc_prob="0.805">
            <gDNA_intron_boundary i_start="36295" i_stop="37310" i_length="1016"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="37311" e_stop="37576" e_length="266"/>
          </exon>
          <intron i_serial="2" don_prob="0.985" acc_prob="0.990">
            <gDNA_intron_boundary i_start="37577" i_stop="39242" i_length="1666"/>
          </intron>
          <exon e_serial="3" e_score="0.957">
            <gDNA_exon_boundary e_start="39243" e_stop="39358" e_length="116"/>
          </exon>
          <intron i_serial="3" don_prob="0.900" acc_prob="0.982">
            <gDNA_intron_boundary i_start="39359" i_stop="42780" i_length="3422"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="42781" e_stop="42811" e_length="31"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36086" stop="36294"/>
              <exon start="37311" stop="37576"/>
              <exon start="39243" stop="39358"/>
              <exon start="42781" stop="42811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603805" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGTTTCTACCCGCAATCCCCAACCCGGCAAACCCCTAATCTTCATCATTTTCTTCAGGATTTGACTCTAATCGTGAACAATCTAGGGCTGGAATAGAGCGGTTTTCGCAGTAGTAATCATGAATATCTTCAGACTGGCCGGAGACATGACACATTTGATTAGTGTCTTAGTTCTCCTCCTGAAAATCTATGCTACCAAATCATGCTCAG : GAATATCATTGAAGACGCAAGAGTTATATGCTATTGTGTTTGTGGCTCGGTATCTGGATTTGTTCACAGACTTCATCTCTCTTTACAACACTGTGATGAAACTGGTTTTTATTGGGAGCTCCTTGGCCATTGTCTGGTGTATGAGGTACCATCGAGTTGTTAGGCGCTCATATGACCGTGAGCTAGACACTTTTCGCTATTGGATTCTTCTGGGGGCGTGTTTTGTTTTGGCACTTGTTCTTCATGAGAAGTTTACCCTTCAAGAG : GTGTTCTGGGCTTTCTCAATATACCTAGAGGCAGTTGCCATTCTTCCCCAATTGGTGCTCTTGCAAAGAAGTGGAAATGTTGATAATCTGACTGGACAATATGTGTTCTTTCTTGG : GGCCTACCGTGCATTTTACATCTTAAACTGG</gDNA_template>
            <first_frame> R  F  Y  P  Q  S  P  T  R  Q  T  P  N  L  H  H  F  L  Q  D  L  T  L  I  V  N  N  L  G  L  E  *  S  G  F  R  S  S  N  H  E  Y  L  Q  T  G  R  R  H  D  T  F  D  *  C  L  S  S  P  P  E  N  L  C  Y  Q  I  M  L  R :   N  I  I  E  D  A  R  V  I  C  Y  C  V  C  G  S  V  S  G  F  V  H  R  L  H  L  S  L  Q  H  C  D  E  T  G  F  Y  W  E  L  L  G  H  C  L  V  Y  E  V  P  S  S  C  *  A  L  I  *  P  *  A  R  H  F  S  L  L  D  S  S  G  G  V  F  C  F  G  T  C  S  S  *  E  V  Y  P  S  R   : G  V  L  G  F  L  N  I  P  R  G  S  C  H  S  S  P  I  G  A  L  A  K  K  W  K  C  *  *  S  D  W  T  I  C  V  L  S  W  :  G  L  P  C  I  L  H  L  K  L  </first_frame>
            <second_frame>  V  S  T  R  N  P  Q  P  G  K  P  L  I  F  I  I  F  F  R  I  *  L  *  S  *  T  I  *  G  W  N  R  A  V  F  A  V  V  I  M  N  I  F  R  L  A  G  D  M  T  H  L  I  S  V  L  V  L  L  L  K  I  Y  A  T  K  S  C  S   : G  I  S  L  K  T  Q  E  L  Y  A  I  V  F  V  A  R  Y  L  D  L  F  T  D  F  I  S  L  Y  N  T  V  M  K  L  V  F  I  G  S  S  L  A  I  V  W  C  M  R  Y  H  R  V  V  R  R  S  Y  D  R  E  L  D  T  F  R  Y  W  I  L  L  G  A  C  F  V  L  A  L  V  L  H  E  K  F  T  L  Q  E  :  V  F  W  A  F  S  I  Y  L  E  A  V  A  I  L  P  Q  L  V  L  L  Q  R  S  G  N  V  D  N  L  T  G  Q  Y  V  F  F  L  G :   A  Y  R  A  F  Y  I  L  N  W </second_frame>
            <third_frame>   F  L  P  A  I  P  N  P  A  N  P  *  S  S  S  F  S  S  G  F  D  S  N  R  E  Q  S  R  A  G  I  E  R  F  S  Q  *  *  S  *  I  S  S  D  W  P  E  T  *  H  I  *  L  V  S  *  F  S  S  *  K  S  M  L  P  N  H  A  Q  :  E  Y  H  *  R  R  K  S  Y  M  L  L  C  L  W  L  G  I  W  I  C  S  Q  T  S  S  L  F  T  T  L  *  *  N  W  F  L  L  G  A  P  W  P  L  S  G  V  *  G  T  I  E  L  L  G  A  H  M  T  V  S  *  T  L  F  A  I  G  F  F  W  G  R  V  L  F  W  H  L  F  F  M  R  S  L  P  F  K  R :   C  S  G  L  S  Q  Y  T  *  R  Q  L  P  F  F  P  N  W  C  S  C  K  E  V  E  M  L  I  I  *  L  D  N  M  C  S  F  L   : G  P  T  V  H  F  T  S  *  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36171" stop="36294"/>
                    <exon start="37311" stop="37576"/>
                    <exon start="39243" stop="39358"/>
                    <exon start="42781" stop="42811"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>537</number_coding_nucleotides>
                  <number_encoded_amino_acids>179</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GWNRAVFAVVIMNIFRLAGDMTHLISVLVLLLKIYATKSCSGISLKTQELYAIVFVARYLDLFTDFISLYNTVMKLVFIGSSLAIVWCMRYHRVVRRSYDRELDTFRYWILLGACFVLALVLHEKFTLQEVFWAFSIYLEAVAILPQLVLLQRSGNVDNLTGQYVFFLGAYRAFYILNW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="50805" PGL_stop="43694"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46706" e_stop="46086"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="46706" e_stop="46086" e_length="621"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46706" stop="46484"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600659" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46677" stop="46315"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46615" stop="46086"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604818" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTGATGAATCCCCTAATGATTTTTATCAAAATCATTAAGTTAAGGTAGATACACATCTTGTCATATGATCAAATGGTTTCGCCAAAAATCAATAATCAGACAACAAAATGTGCGAACTCGATATTTTACACGACTCTCTTTACCAATTCTGCCCCGAATTACACTTAAAACGACTCAACAGCTTAACGTTGGCTTGCCACGCCTTACTTGACTGTAAAACTCTCACTCTTACCGAACTTGGCCGTAACCTGCCAACCAAAGCGAGAACAAAACATAACATCAAACGAATCGACCGATTGTTAGGTAATCGTCACCTCCACAAAGAGCGACTCGCTGTATACCGTTGGCATGCTAGCTTTATCTGTTCGGGCAATACGATGCCCATTGTACTTGTTGACTGGTCTGATATCCGTGAGCAAAAACGGCTTATGGTATTGCGAGCTTCAGTCGCACTACACGGTCGTTCTGTTACTCTTTATGAGAAAGCGTTCCCGCTTTCAGAGCAATGTTCAAAGAAAGCTCATGACCAATTTCTAGCCGACCTTGCGAGCATTCTACCGAGTAACACCACACCGCTCATTGTCAGTGATGCTGGCTTTAAAGTGCCATGGTATAAATCCG</gDNA_template>
            <first_frame> L  M  N  P  L  M  I  F  I  K  I  I  K  L  R  *  I  H  I  L  S  Y  D  Q  M  V  S  P  K  I  N  N  Q  T  T  K  C  A  N  S  I  F  Y  T  T  L  F  T  N  S  A  P  N  Y  T  *  N  D  S  T  A  *  R  W  L  A  T  P  Y  L  T  V  K  L  S  L  L  P  N  L  A  V  T  C  Q  P  K  R  E  Q  N  I  T  S  N  E  S  T  D  C  *  V  I  V  T  S  T  K  S  D  S  L  Y  T  V  G  M  L  A  L  S  V  R  A  I  R  C  P  L  Y  L  L  T  G  L  I  S  V  S  K  N  G  L  W  Y  C  E  L  Q  S  H  Y  T  V  V  L  L  L  F  M  R  K  R  S  R  F  Q  S  N  V  Q  R  K  L  M  T  N  F  *  P  T  L  R  A  F  Y  R  V  T  P  H  R  S  L  S  V  M  L  A  L  K  C  H  G  I  N  P </first_frame>
            <second_frame>  *  *  I  P  *  *  F  L  S  K  S  L  S  *  G  R  Y  T  S  C  H  M  I  K  W  F  R  Q  K  S  I  I  R  Q  Q  N  V  R  T  R  Y  F  T  R  L  S  L  P  I  L  P  R  I  T  L  K  T  T  Q  Q  L  N  V  G  L  P  R  L  T  *  L  *  N  S  H  S  Y  R  T  W  P  *  P  A  N  Q  S  E  N  K  T  *  H  Q  T  N  R  P  I  V  R  *  S  S  P  P  Q  R  A  T  R  C  I  P  L  A  C  *  L  Y  L  F  G  Q  Y  D  A  H  C  T  C  *  L  V  *  Y  P  *  A  K  T  A  Y  G  I  A  S  F  S  R  T  T  R  S  F  C  Y  S  L  *  E  S  V  P  A  F  R  A  M  F  K  E  S  S  *  P  I  S  S  R  P  C  E  H  S  T  E  *  H  H  T  A  H  C  Q  *  C  W  L  *  S  A  M  V  *  I   </second_frame>
            <third_frame>   D  E  S  P  N  D  F  Y  Q  N  H  *  V  K  V  D  T  H  L  V  I  *  S  N  G  F  A  K  N  Q  *  S  D  N  K  M  C  E  L  D  I  L  H  D  S  L  Y  Q  F  C  P  E  L  H  L  K  R  L  N  S  L  T  L  A  C  H  A  L  L  D  C  K  T  L  T  L  T  E  L  G  R  N  L  P  T  K  A  R  T  K  H  N  I  K  R  I  D  R  L  L  G  N  R  H  L  H  K  E  R  L  A  V  Y  R  W  H  A  S  F  I  C  S  G  N  T  M  P  I  V  L  V  D  W  S  D  I  R  E  Q  K  R  L  M  V  L  R  A  S  V  A  L  H  G  R  S  V  T  L  Y  E  K  A  F  P  L  S  E  Q  C  S  K  K  A  H  D  Q  F  L  A  D  L  A  S  I  L  P  S  N  T  T  P  L  I  V  S  D  A  G  F  K  V  P  W  Y  K  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46611" stop="46087"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>525</number_coding_nucleotides>
                  <number_encoded_amino_acids>175</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SDNKMCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPTKARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSDIREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASILPSNTTPLIVSDAGFKVPWYKS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="50805" e_stop="50522"/>
            <exon e_start="50401" e_stop="50220"/>
            <exon e_start="49579" e_stop="49443"/>
            <exon e_start="49077" e_stop="48912"/>
            <exon e_start="48795" e_stop="48679"/>
            <exon e_start="44413" e_stop="44253"/>
            <exon e_start="44111" e_stop="43694"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.252" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.860" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.827" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="50805" e_stop="50522" e_length="284"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.994">
            <gDNA_intron_boundary i_start="50521" i_stop="50402" i_length="120"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="50401" e_stop="50220" e_length="182"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.981">
            <gDNA_intron_boundary i_start="50219" i_stop="49580" i_length="640"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="49579" e_stop="49443" e_length="137"/>
          </exon>
          <intron i_serial="3" don_prob="0.252" acc_prob="1.000">
            <gDNA_intron_boundary i_start="49442" i_stop="49078" i_length="365"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="49077" e_stop="48912" e_length="166"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.860">
            <gDNA_intron_boundary i_start="48911" i_stop="48796" i_length="116"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="48795" e_stop="48679" e_length="117"/>
          </exon>
          <intron i_serial="5" don_prob="0.980" acc_prob="0.959">
            <gDNA_intron_boundary i_start="48678" i_stop="44414" i_length="4265"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="44413" e_stop="44253" e_length="161"/>
          </exon>
          <intron i_serial="6" don_prob="0.827" acc_prob="0.996">
            <gDNA_intron_boundary i_start="44252" i_stop="44112" i_length="141"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="44111" e_stop="43694" e_length="418"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50805" stop="50522"/>
              <exon start="50401" stop="50220"/>
              <exon start="49579" stop="49443"/>
              <exon start="49077" stop="48912"/>
              <exon start="48795" stop="48679"/>
              <exon start="44413" stop="44253"/>
              <exon start="44111" stop="43694"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U582748" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTCCAGAGTAGTGCATAAGAAGTTTATGAACTGATCAACTCTATAAAGGAATCAGTACCTTTGATTTTCTGGCTATTCTAAATTTGACTTGAAAAATCAGACCTCTTTAATCATATCATATTGTTTTGGTTATCCAGATTTCACATATACCAGTTGTTAGCTTTGGACACAAAAGATCGTTAAAAATCTACAGTGCGAAAATGGAGCTCTCAATCACACAACCTGATGATTGGCATCTTCATCTCCGTGATGGTGATGTTCTTAAGGCAGTTGTCTCTCACAG : TGCACATCACTTTGGGAGGGCAATAGTCATGCCAAATTTGAAGCCTCCTATCACTACCACTGCTGCTGCTGTAGCATACCGGGAGGCGATATTGAAATCTTTACCTGCTGATAGTGATTTCAACCCTCTTATGACACTTTATTTGACAGATACAACCAGTCCTATGGAAATCAAACTAGCAA : GAGAGAGCCAGGTCGTATTTGGGGTGAAGTTGTACCCTGCTGGTGCCACGACAAATTCTCAAGATGGAGTGACTGATCTTTTTGGGAAGTGTTTACCAGTTCTACAAGAAATGGTTGAGCATAATATGCCTTTGCTG : GTTCATGGAGAGGTTACTAATCCTGAGGTTGACATGTTTGATAGAGAAAAGGTATTCATTGAAACGGTTCTAAGACCTTTGGTGCAGAAATTTCCACGATTGAAGGTCGTGATGGAGCATGTCACCACCATGGATGCTGTTAAGTTTGTTGAATCTTGCAGTGAAG : GATTTGTTGCAGCGACTGTCACCCCACAACATCTTGTTTTAAACAGGAATTCTCTCTTCCAAGGGGGCTTACAACCGCATAATTACTGCCTTCCAGTCCTCAAAAGAGAGATCCACA : GGGAGGCACTTGTGTCAGCTGTAACAAGTGGAAGTAAAAGATTTTTTCTTGGGACTGATAGTGCTCCTCATGATAGACGAAGAAAAGAATGTTCTTGTGGATGTGCTGGTATTTACAATGCTCCTGTAGCCTTATCAGTATATGCAAAGGTGTTTGAAAAG : GAAAATGCACTTGACAAGCTCGAAGCATTTACCAGCTTCAATGGACCAGACTTTTATGGGCTTCCGAGGAACAACTCAAAGATTAAGTTGAGTAAGACACCATGGAAGGTACCCGAATCCTTTTCATATGCATCAGGAGATATAATTCCCATGTTTGCTGGTGAAATGCTCGACTGGTTGCCGGCTCCTCTCTGAGAAAGGAAAAAAAAAAGAGATTCCCATTCTCATTTGTTGTTCTTGTACTGTAATACTGTGATTTAACTAAAGATATAGAGTGCAGGTGTGTCATCTTTCCTTTCATGTTTTAGATATTATCGCGATGATAATTATTGAAACAGTAAGTTTTCTATATGTGACTGAACTAAAGCTTTAGTTCGACCCATTATGATTGATTTTAAATAAAGATGAGGTTTAGTAC</gDNA_template>
            <first_frame> G  P  E  *  C  I  R  S  L  *  T  D  Q  L  Y  K  G  I  S  T  F  D  F  L  A  I  L  N  L  T  *  K  I  R  P  L  *  S  Y  H  I  V  L  V  I  Q  I  S  H  I  P  V  V  S  F  G  H  K  R  S  L  K  I  Y  S  A  K  M  E  L  S  I  T  Q  P  D  D  W  H  L  H  L  R  D  G  D  V  L  K  A  V  V  S  H  S :   A  H  H  F  G  R  A  I  V  M  P  N  L  K  P  P  I  T  T  T  A  A  A  V  A  Y  R  E  A  I  L  K  S  L  P  A  D  S  D  F  N  P  L  M  T  L  Y  L  T  D  T  T  S  P  M  E  I  K  L  A   : R  E  S  Q  V  V  F  G  V  K  L  Y  P  A  G  A  T  T  N  S  Q  D  G  V  T  D  L  F  G  K  C  L  P  V  L  Q  E  M  V  E  H  N  M  P  L  L  :  V  H  G  E  V  T  N  P  E  V  D  M  F  D  R  E  K  V  F  I  E  T  V  L  R  P  L  V  Q  K  F  P  R  L  K  V  V  M  E  H  V  T  T  M  D  A  V  K  F  V  E  S  C  S  E   : G  F  V  A  A  T  V  T  P  Q  H  L  V  L  N  R  N  S  L  F  Q  G  G  L  Q  P  H  N  Y  C  L  P  V  L  K  R  E  I  H   : R  E  A  L  V  S  A  V  T  S  G  S  K  R  F  F  L  G  T  D  S  A  P  H  D  R  R  R  K  E  C  S  C  G  C  A  G  I  Y  N  A  P  V  A  L  S  V  Y  A  K  V  F  E  K  :  E  N  A  L  D  K  L  E  A  F  T  S  F  N  G  P  D  F  Y  G  L  P  R  N  N  S  K  I  K  L  S  K  T  P  W  K  V  P  E  S  F  S  Y  A  S  G  D  I  I  P  M  F  A  G  E  M  L  D  W  L  P  A  P  L  *  E  R  K  K  K  R  D  S  H  S  H  L  L  F  L  Y  C  N  T  V  I  *  L  K  I  *  S  A  G  V  S  S  F  L  S  C  F  R  Y  Y  R  D  D  N  Y  *  N  S  K  F  S  I  C  D  *  T  K  A  L  V  R  P  I  M  I  D  F  K  *  R  *  G  L  V  </first_frame>
            <second_frame>  V  Q  S  S  A  *  E  V  Y  E  L  I  N  S  I  K  E  S  V  P  L  I  F  W  L  F  *  I  *  L  E  K  S  D  L  F  N  H  I  I  L  F  W  L  S  R  F  H  I  Y  Q  L  L  A  L  D  T  K  D  R  *  K  S  T  V  R  K  W  S  S  Q  S  H  N  L  M  I  G  I  F  I  S  V  M  V  M  F  L  R  Q  L  S  L  T   : V  H  I  T  L  G  G  Q  *  S  C  Q  I  *  S  L  L  S  L  P  L  L  L  L  *  H  T  G  R  R  Y  *  N  L  Y  L  L  I  V  I  S  T  L  L  *  H  F  I  *  Q  I  Q  P  V  L  W  K  S  N  *  Q  :  E  R  A  R  S  Y  L  G  *  S  C  T  L  L  V  P  R  Q  I  L  K  M  E  *  L  I  F  L  G  S  V  Y  Q  F  Y  K  K  W  L  S  I  I  C  L  C  W :   F  M  E  R  L  L  I  L  R  L  T  C  L  I  E  K  R  Y  S  L  K  R  F  *  D  L  W  C  R  N  F  H  D  *  R  S  *  W  S  M  S  P  P  W  M  L  L  S  L  L  N  L  A  V  K  :  D  L  L  Q  R  L  S  P  H  N  I  L  F  *  T  G  I  L  S  S  K  G  A  Y  N  R  I  I  T  A  F  Q  S  S  K  E  R  S  T  :  G  R  H  L  C  Q  L  *  Q  V  E  V  K  D  F  F  L  G  L  I  V  L  L  M  I  D  E  E  K  N  V  L  V  D  V  L  V  F  T  M  L  L  *  P  Y  Q  Y  M  Q  R  C  L  K  R :   K  M  H  L  T  S  S  K  H  L  P  A  S  M  D  Q  T  F  M  G  F  R  G  T  T  Q  R  L  S  *  V  R  H  H  G  R  Y  P  N  P  F  H  M  H  Q  E  I  *  F  P  C  L  L  V  K  C  S  T  G  C  R  L  L  S  E  K  G  K  K  K  E  I  P  I  L  I  C  C  S  C  T  V  I  L  *  F  N  *  R  Y  R  V  Q  V  C  H  L  S  F  H  V  L  D  I  I  A  M  I  I  I  E  T  V  S  F  L  Y  V  T  E  L  K  L  *  F  D  P  L  *  L  I  L  N  K  D  E  V  *  Y </second_frame>
            <third_frame>   S  R  V  V  H  K  K  F  M  N  *  S  T  L  *  R  N  Q  Y  L  *  F  S  G  Y  S  K  F  D  L  K  N  Q  T  S  L  I  I  S  Y  C  F  G  Y  P  D  F  T  Y  T  S  C  *  L  W  T  Q  K  I  V  K  N  L  Q  C  E  N  G  A  L  N  H  T  T  *  *  L  A  S  S  S  P  *  W  *  C  S  *  G  S  C  L  S  Q  :  C  T  S  L  W  E  G  N  S  H  A  K  F  E  A  S  Y  H  Y  H  C  C  C  C  S  I  P  G  G  D  I  E  I  F  T  C  *  *  *  F  Q  P  S  Y  D  T  L  F  D  R  Y  N  Q  S  Y  G  N  Q  T  S  K :   R  E  P  G  R  I  W  G  E  V  V  P  C  W  C  H  D  K  F  S  R  W  S  D  *  S  F  W  E  V  F  T  S  S  T  R  N  G  *  A  *  Y  A  F  A   : G  S  W  R  G  Y  *  S  *  G  *  H  V  *  *  R  K  G  I  H  *  N  G  S  K  T  F  G  A  E  I  S  T  I  E  G  R  D  G  A  C  H  H  H  G  C  C  *  V  C  *  I  L  Q  *  R :   I  C  C  S  D  C  H  P  T  T  S  C  F  K  Q  E  F  S  L  P  R  G  L  T  T  A  *  L  L  P  S  S  P  Q  K  R  D  P  Q :   G  G  T  C  V  S  C  N  K  W  K  *  K  I  F  S  W  D  *  *  C  S  S  *  *  T  K  K  R  M  F  L  W  M  C  W  Y  L  Q  C  S  C  S  L  I  S  I  C  K  G  V  *  K   : G  K  C  T  *  Q  A  R  S  I  Y  Q  L  Q  W  T  R  L  L  W  A  S  E  E  Q  L  K  D  *  V  E  *  D  T  M  E  G  T  R  I  L  F  I  C  I  R  R  Y  N  S  H  V  C  W  *  N  A  R  L  V  A  G  S  S  L  R  K  E  K  K  K  R  F  P  F  S  F  V  V  L  V  L  *  Y  C  D  L  T  K  D  I  E  C  R  C  V  I  F  P  F  M  F  *  I  L  S  R  *  *  L  L  K  Q  *  V  F  Y  M  *  L  N  *  S  F  S  S  T  H  Y  D  *  F  *  I  K  M  R  F  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50694" stop="50522"/>
                    <exon start="50401" stop="50220"/>
                    <exon start="49579" stop="49443"/>
                    <exon start="49077" stop="48912"/>
                    <exon start="48795" stop="48679"/>
                    <exon start="44413" stop="44253"/>
                    <exon start="44111" stop="43917"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1128</number_coding_nucleotides>
                  <number_encoded_amino_acids>376</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SYHIVLVIQISHIPVVSFGHKRSLKIYSAKMELSITQPDDWHLHLRDGDVLKAVVSHSAHHFGRAIVMPNLKPPITTTAAAVAYREAILKSLPADSDFNPLMTLYLTDTTSPMEIKLARESQVVFGVKLYPAGATTNSQDGVTDLFGKCLPVLQEMVEHNMPLLVHGEVTNPEVDMFDREKVFIETVLRPLVQKFPRLKVVMEHVTTMDAVKFVESCSEGFVAATVTPQHLVLNRNSLFQGGLQPHNYCLPVLKREIHREALVSAVTSGSKRFFLGTDSAPHDRRRKECSCGCAGIYNAPVALSVYAKVFEKENALDKLEAFTSFNGPDFYGLPRNNSKIKLSKTPWKVPESFSYASGDIIPMFAGEMLDWLPAPL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="45111" PGL_stop="47015"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="45365" e_stop="46124"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.944">
            <gDNA_exon_boundary e_start="45365" e_stop="46124" e_length="760"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45365" stop="46060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45552" stop="46124"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589393" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCATGCTAAGTGCTGAGAGATCCCCTCATAATTTCCCCAAAACGTAACCATGTGTGAATAGATTTTGAGTAAGCAGGGTTGCAGCCACGAGTGAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTCTGAGCATGAACGCCCGCAAGCCAACATGTTAGTTGAAGCATCAGGGCGATTAGCAGCATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAGGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGA</gDNA_template>
            <first_frame> I  M  L  S  A  E  R  S  P  H  N  F  P  K  T  *  P  C  V  N  R  F  *  V  S  R  V  A  A  T  S  E  S  S  L  V  I  V  *  P  E  C  R  K  T  S  M  P  K  R  T  V  E  S  T  F  R  F  L  T  V  L  A  W  K  C  L  S  Q  P  C  F  *  A  *  T  P  A  S  Q  H  V  S  *  S  I  R  A  I  S  S  M  I  S  K  R  S  E  L  L  V  R  L  W  R  R  P  S  P  *  A  G  L  F  K  S  R  K  V  S  S  I  C  I  R  F  E  *  I  L  T  S  C  L  G  V  R  I  S  T  G  K  L  V  A  R  I  H  G  S  F  A  D  A  E  *  I  L  G  D  G  W  *  Q  *  V  R  V  E  R  *  F  F  R  P  L  E  R  D  L  Y  N  R  I  W  H  E  I  G  L  L  L  V  S  L  L  *  P  K  V  F  E  *  L  D  D  I  S  C  K  L  L  I  G  F  Q  F  S  A  P  R  S  A  Y  C  T  F  P  L  T  R  L  N  Q  Y  Q  P  S  F  S  T  D  L  Y  H  G  T  L  K  P  A  S  L  </first_frame>
            <second_frame>  S  C  *  V  L  R  D  P  L  I  I  S  P  K  R  N  H  V  *  I  D  F  E  *  A  G  L  Q  P  R  V  S  L  P  L  L  L  C  S  Q  N  A  A  K  L  P  C  L  S  E  L  L  R  V  R  F  D  F  *  L  C  *  P  G  S  A  C  P  N  L  V  S  E  H  E  R  P  Q  A  N  M  L  V  E  A  S  G  R  L  A  A  *  Y  Q  N  A  L  S  C  S  F  G  Y  G  V  G  L  V  R  R  Q  D  F  S  S  L  G  R  F  L  Q  S  A  F  A  S  N  R  Y  *  Q  V  V  W  V  F  E  F  Q  Q  V  S  *  L  L  E  S  M  A  P  L  P  T  L  S  R  F  *  V  T  G  G  D  N  E  S  V  S  S  A  D  F  F  G  L  *  S  E  I  Y  T  I  E  F  G  M  R  L  D  C  F  *  S  A  S  Y  S  L  K  S  L  S  D  *  M  T  Y  H  V  S  C  *  *  V  S  S  F  P  L  L  G  L  H  I  V  L  F  L  L  L  D  L  T  S  T  N  P  A  S  Q  R  I  Y  T  M  A  L  *  S  Q  H  H  * </second_frame>
            <third_frame>   H  A  K  C  *  E  I  P  S  *  F  P  Q  N  V  T  M  C  E  *  I  L  S  K  Q  G  C  S  H  E  *  V  F  P  C  Y  C  V  A  R  M  P  Q  N  F  H  A  *  A  N  C  *  E  Y  V  S  I  S  D  C  V  S  L  E  V  L  V  P  T  L  F  L  S  M  N  A  R  K  P  T  C  *  L  K  H  Q  G  D  *  Q  H  D  I  K  T  L  *  A  A  R  S  A  M  A  *  A  *  S  V  G  R  T  F  Q  V  S  E  G  F  F  N  L  H  S  L  R  I  D  I  N  K  L  F  G  C  S  N  F  N  R  *  V  S  C  *  N  P  W  L  L  C  R  R  *  V  D  F  R  *  R  V  V  T  M  S  P  C  R  A  L  I  F  S  A  F  R  A  R  F  I  Q  *  N  L  A  *  D  W  I  A  F  S  Q  P  L  I  A  *  S  L  *  V  T  R  *  H  I  M  *  V  A  D  R  F  P  V  F  R  S  *  V  C  I  L  Y  F  S  S  Y  S  T  *  P  V  P  T  Q  L  L  N  G  F  I  P  W  H  F  K  A  S  I  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0011K05.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="45111" e_stop="45368"/>
            <exon e_start="46707" e_stop="47015"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.731" e_score="0.996"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="45111" e_stop="45368" e_length="258"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.731">
            <gDNA_intron_boundary i_start="45369" i_stop="46706" i_length="1338"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="46707" e_stop="47015" e_length="309"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45111" stop="45368"/>
              <exon start="46707" stop="47015"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U601842" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGTTTAATTCATTTCTTCTTTGTTATGACAGTAATCCATACAACAAAATCAAAATGCCATATTCCGAAAAGATTATAGGCTTTTAGATTTGATTTAACGAAATATAAGCAAAGGCAGATTAGTTTTCACAAATAGTGTTTTGGACTCACTTCCCACTTACACAATCTCTTTATTCCTTATTCCTACATATCTGGCCAAGAAATTGATAAGATTCGTCGAATCTGAAATGAAAACAGGGACAAGAAAGCTTTTAATCA : TGCTAAGTGGGAAGCTGTCCAAAAAGATAAAAATCTGGAGGCCTGGGAGTACGGAATCTGAAAGCACACAATGATAGCCTCTTAAACAAATGGTCATGGAGATTCACAAAAGGTGAGAATGCAAAACGGAGTAAGTCATCGAGACCAAATATGGTATGCAACACCTGTGGATAACAAAGCTTACTAGCTCTTGTATGGTTTCTCTGTCGGGAAAAGCATCTGGACTTTCTTTAGACGAATTCCTAGGAAACAACATCTTTCAAGTTGGGAAATGGCAGAAAATCAGCTTTTTGGAATGGCCGTACCCCT</gDNA_template>
            <first_frame> L  F  N  S  F  L  L  C  Y  D  S  N  P  Y  N  K  I  K  M  P  Y  S  E  K  I  I  G  F  *  I  *  F  N  E  I  *  A  K  A  D  *  F  S  Q  I  V  F  W  T  H  F  P  L  T  Q  S  L  Y  S  L  F  L  H  I  W  P  R  N  *  *  D  S  S  N  L  K  *  K  Q  G  Q  E  S  F  *  S  :  C  *  V  G  S  C  P  K  R  *  K  S  G  G  L  G  V  R  N  L  K  A  H  N  D  S  L  L  N  K  W  S  W  R  F  T  K  G  E  N  A  K  R  S  K  S  S  R  P  N  M  V  C  N  T  C  G  *  Q  S  L  L  A  L  V  W  F  L  C  R  E  K  H  L  D  F  L  *  T  N  S  *  E  T  T  S  F  K  L  G  N  G  R  K  S  A  F  W  N  G  R  T  P </first_frame>
            <second_frame>  C  L  I  H  F  F  F  V  M  T  V  I  H  T  T  K  S  K  C  H  I  P  K  R  L  *  A  F  R  F  D  L  T  K  Y  K  Q  R  Q  I  S  F  H  K  *  C  F  G  L  T  S  H  L  H  N  L  F  I  P  Y  S  Y  I  S  G  Q  E  I  D  K  I  R  R  I  *  N  E  N  R  D  K  K  A  F  N  H :   A  K  W  E  A  V  Q  K  D  K  N  L  E  A  W  E  Y  G  I  *  K  H  T  M  I  A  S  *  T  N  G  H  G  D  S  Q  K  V  R  M  Q  N  G  V  S  H  R  D  Q  I  W  Y  A  T  P  V  D  N  K  A  Y  *  L  L  Y  G  F  S  V  G  K  S  I  W  T  F  F  R  R  I  P  R  K  Q  H  L  S  S  W  E  M  A  E  N  Q  L  F  G  M  A  V  P   </second_frame>
            <third_frame>   V  *  F  I  S  S  L  L  *  Q  *  S  I  Q  Q  N  Q  N  A  I  F  R  K  D  Y  R  L  L  D  L  I  *  R  N  I  S  K  G  R  L  V  F  T  N  S  V  L  D  S  L  P  T  Y  T  I  S  L  F  L  I  P  T  Y  L  A  K  K  L  I  R  F  V  E  S  E  M  K  T  G  T  R  K  L  L  I   : M  L  S  G  K  L  S  K  K  I  K  I  W  R  P  G  S  T  E  S  E  S  T  Q  *  *  P  L  K  Q  M  V  M  E  I  H  K  R  *  E  C  K  T  E  *  V  I  E  T  K  Y  G  M  Q  H  L  W  I  T  K  L  T  S  S  C  M  V  S  L  S  G  K  A  S  G  L  S  L  D  E  F  L  G  N  N  I  F  Q  V  G  K  W  Q  K  I  S  F  L  E  W  P  Y  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="45209" stop="45368"/>
                    <exon start="46707" stop="46780"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RNISKGRLVFTNSVLDSLPTYTISLFLIPTYLAKKLIRFVESEMKTGTRKLLIMLSGKLSKKIKIWRPGSTESESTQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="52975" PGL_stop="58915"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52975" e_stop="53262"/>
            <exon e_start="57252" e_stop="57374"/>
            <exon e_start="58459" e_stop="58578"/>
            <exon e_start="58656" e_stop="58915"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="0.999" e_score="0.997"/>
          <exon-intron don_prob="0.963" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.803" acc_prob="0.989" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="52975" e_stop="53262" e_length="288"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="0.999">
            <gDNA_intron_boundary i_start="53263" i_stop="57251" i_length="3989"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="57252" e_stop="57374" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.963" acc_prob="0.990">
            <gDNA_intron_boundary i_start="57375" i_stop="58458" i_length="1084"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="58459" e_stop="58578" e_length="120"/>
          </exon>
          <intron i_serial="3" don_prob="0.803" acc_prob="0.989">
            <gDNA_intron_boundary i_start="58579" i_stop="58655" i_length="77"/>
          </intron>
          <exon e_serial="4" e_score="0.996">
            <gDNA_exon_boundary e_start="58656" e_stop="58915" e_length="260"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52975" stop="53262"/>
              <exon start="57252" stop="57374"/>
              <exon start="58459" stop="58578"/>
              <exon start="58656" stop="58915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U572351" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAGGAAGTTTCTAATTTTGCCCAAAATCGGTAGAAAAAAAAAAGTAGTAGTATATATATAGCTGTCATTGGGAGAGTTGTGAGCACGCAATAATACTCCCTCTAAAGAAGCACTAAATTTTCCCTTTTTGCATATTAAACGCTCTCCATCTAACATTTTGTTCAGTTGTCAATAATTGACTGGGAAATTGATTCCCGAGATCGGCAACTGGTGTTCTTCAATACTCAATTTTCGTGCAACTCTGTTAAAATGGGTTGCGTTGGATCCTCACGTACCAAAGGAGATG : AATCTGTCAGGAAAATAAGAAAACCAAAGCCATGGAGACACACAGAACCAATAACAAGAGCTCAGCTTCTAAAAATGCGTGAAGAATTCTGGGACACTGCACCACACTATGGGGGAAAAAAAG : AGATCTGGGATGCGCTACGTGCTGCTGCCGAGGCAGAAATAGGCCTTGCACAAACAATCGTGAACAGTGCTGGGATAATTGTTCAAACCACTGATCTAACAGTCTGCTATGATGAGAGAG : GTGCCAAGTATGACTTGCCTCTATACGTTTTGAGCGAACCAACAAATCTGACTGGTGAAAACTGAGAAGGCAATATAATCAAGTGTTCATGCTTCATTGAGACTGTAAATGCTGTAAATTGCTCTCACAAGTCATTTCTCTCAAACATTCATTTCGTTTTATGCATTATGGTCCTGTTTCACGACATCAAGAATCGTCTGTCGCAGCAGCAACATGCACCATGATATTCTTTTGGACATAATATCTCTAGCCTGAAGAGG</gDNA_template>
            <first_frame> K  R  K  F  L  I  L  P  K  I  G  R  K  K  K  V  V  V  Y  I  *  L  S  L  G  E  L  *  A  R  N  N  T  P  S  K  E  A  L  N  F  P  F  L  H  I  K  R  S  P  S  N  I  L  F  S  C  Q  *  L  T  G  K  L  I  P  E  I  G  N  W  C  S  S  I  L  N  F  R  A  T  L  L  K  W  V  A  L  D  P  H  V  P  K  E  M  :  N  L  S  G  K  *  E  N  Q  S  H  G  D  T  Q  N  Q  *  Q  E  L  S  F  *  K  C  V  K  N  S  G  T  L  H  H  T  M  G  E  K  K  :  R  S  G  M  R  Y  V  L  L  P  R  Q  K  *  A  L  H  K  Q  S  *  T  V  L  G  *  L  F  K  P  L  I  *  Q  S  A  M  M  R  E  :  V  P  S  M  T  C  L  Y  T  F  *  A  N  Q  Q  I  *  L  V  K  T  E  K  A  I  *  S  S  V  H  A  S  L  R  L  *  M  L  *  I  A  L  T  S  H  F  S  Q  T  F  I  S  F  Y  A  L  W  S  C  F  T  T  S  R  I  V  C  R  S  S  N  M  H  H  D  I  L  L  D  I  I  S  L  A  *  R   </first_frame>
            <second_frame>  K  G  S  F  *  F  C  P  K  S  V  E  K  K  K  *  *  Y  I  Y  S  C  H  W  E  S  C  E  H  A  I  I  L  P  L  K  K  H  *  I  F  P  F  C  I  L  N  A  L  H  L  T  F  C  S  V  V  N  N  *  L  G  N  *  F  P  R  S  A  T  G  V  L  Q  Y  S  I  F  V  Q  L  C  *  N  G  L  R  W  I  L  T  Y  Q  R  R  * :   I  C  Q  E  N  K  K  T  K  A  M  E  T  H  R  T  N  N  K  S  S  A  S  K  N  A  *  R  I  L  G  H  C  T  T  L  W  G  K  K  R :   D  L  G  C  A  T  C  C  C  R  G  R  N  R  P  C  T  N  N  R  E  Q  C  W  D  N  C  S  N  H  *  S  N  S  L  L  *  *  E  R :   C  Q  V  *  L  A  S  I  R  F  E  R  T  N  K  S  D  W  *  K  L  R  R  Q  Y  N  Q  V  F  M  L  H  *  D  C  K  C  C  K  L  L  S  Q  V  I  S  L  K  H  S  F  R  F  M  H  Y  G  P  V  S  R  H  Q  E  S  S  V  A  A  A  T  C  T  M  I  F  F  W  T  *  Y  L  *  P  E  E  </second_frame>
            <third_frame>   K  E  V  S  N  F  A  Q  N  R  *  K  K  K  S  S  S  I  Y  I  A  V  I  G  R  V  V  S  T  Q  *  Y  S  L  *  R  S  T  K  F  S  L  F  A  Y  *  T  L  S  I  *  H  F  V  Q  L  S  I  I  D  W  E  I  D  S  R  D  R  Q  L  V  F  F  N  T  Q  F  S  C  N  S  V  K  M  G  C  V  G  S  S  R  T  K  G  D   : E  S  V  R  K  I  R  K  P  K  P  W  R  H  T  E  P  I  T  R  A  Q  L  L  K  M  R  E  E  F  W  D  T  A  P  H  Y  G  G  K  K   : E  I  W  D  A  L  R  A  A  A  E  A  E  I  G  L  A  Q  T  I  V  N  S  A  G  I  I  V  Q  T  T  D  L  T  V  C  Y  D  E  R   : G  A  K  Y  D  L  P  L  Y  V  L  S  E  P  T  N  L  T  G  E  N  *  E  G  N  I  I  K  C  S  C  F  I  E  T  V  N  A  V  N  C  S  H  K  S  F  L  S  N  I  H  F  V  L  C  I  M  V  L  F  H  D  I  K  N  R  L  S  Q  Q  Q  H  A  P  *  Y  S  F  G  H  N  I  S  S  L  K  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53130" stop="53262"/>
                    <exon start="57252" stop="57374"/>
                    <exon start="58459" stop="58578"/>
                    <exon start="58656" stop="58720"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>438</number_coding_nucleotides>
                  <number_encoded_amino_acids>146</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HFVQLSIIDWEIDSRDRQLVFFNTQFSCNSVKMGCVGSSRTKGDESVRKIRKPKPWRHTEPITRAQLLKMREEFWDTAPHYGGKKEIWDALRAAAEAEIGLAQTIVNSAGIIVQTTDLTVCYDERGAKYDLPLYVLSEPTNLTGEN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="73900" PGL_stop="76573"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73900" e_stop="73926"/>
            <exon e_start="74251" e_stop="74817"/>
            <exon e_start="76168" e_stop="76573"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.989" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="73900" e_stop="73926" e_length="27"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="73927" i_stop="74250" i_length="324"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="74251" e_stop="74817" e_length="567"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.989">
            <gDNA_intron_boundary i_start="74818" i_stop="76167" i_length="1350"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="76168" e_stop="76573" e_length="406"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73900" stop="73926"/>
              <exon start="74251" stop="74817"/>
              <exon start="76168" stop="76286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U597780" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76260" stop="76573"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598275" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAGGAAGTTCTTTCGACGCCAAGCAA : TATCAAAACAAGATATGGAAAAACTGCGTCAAGCTCTGAAAACACTATCTGAAGCTGAAAAGCAGCTGAGAATGTCAAATGACAGACTTACCTGGCTTACAGCTGCATTGCTGCAACTCGCTCCAGATCAGCAGTATATGTTGCCCAATTCCTCAGCTGACACTAGTTTTATTCAAAGTCCACTAGACTTGAATAATGCAGGGGGAACAGAAAGACCCAGGAAAAGCAATGTCGAGCATGCTGACATGCTACACAAAAACAGAGGGTTCCCATCAAAAAGTAGAGTAGAAAACTTTCAAGCTGGATGTTCTAGTGATATTTACTCCGACGCCAGGATGAAAGGGGTTCACATTGGTGGGAAAGGGCATAATGGAACTGGAGAATTTACTCAAAAAGCTTATGGCGTCTCTAGTGATAAAAATAGAACAAGTAGTGGTCAGGTTACAGGTAAGTTGCACCAGGATATTGAAGAAATGTGGTTAGAAGTGCTTGAAAATATCGAAATAAATGGCTTAAAAGAGTTTATGTATCGTGAAGGGAAGCTTACCTCAGTCAGCTTTGGAGCAG : CTCCAACTGTGCAGTTACTGTTCAGCTCACATATAACAAAATCCAAAGTAGAGAAATTTAGGGGTCATATTTTACAAGCTTTTGAGTCTGTTCTTGGGTCCCCCGTGACAATAGAAATCAGATGTGAATCCGGGAAAGATGGCAGGGCTGGACCAATTGTGTTGTCAGCACCTCATGGTGTATCTCATATAGGTACAAATCCTGGCATTCATGGTAATGGGGTGAGAATGGCAGGTCCTGATGAAATCAGCAGGGCACAAGTGAATGATAGCGAAGGTTTAGCATTTAGAAAGCTCGACTCGAGAGGAATAGGTGGTAGCGAGATAGTTGAAGAGGAAGCTTCTCCAAGAGAATCAAAACACAATGATCAGATCGACAACAATACACAATTTGATAGGCGGAATTT</gDNA_template>
            <first_frame> G  G  S  S  F  D  A  K  Q  :  Y  Q  N  K  I  W  K  N  C  V  K  L  *  K  H  Y  L  K  L  K  S  S  *  E  C  Q  M  T  D  L  P  G  L  Q  L  H  C  C  N  S  L  Q  I  S  S  I  C  C  P  I  P  Q  L  T  L  V  L  F  K  V  H  *  T  *  I  M  Q  G  E  Q  K  D  P  G  K  A  M  S  S  M  L  T  C  Y  T  K  T  E  G  S  H  Q  K  V  E  *  K  T  F  K  L  D  V  L  V  I  F  T  P  T  P  G  *  K  G  F  T  L  V  G  K  G  I  M  E  L  E  N  L  L  K  K  L  M  A  S  L  V  I  K  I  E  Q  V  V  V  R  L  Q  V  S  C  T  R  I  L  K  K  C  G  *  K  C  L  K  I  S  K  *  M  A  *  K  S  L  C  I  V  K  G  S  L  P  Q  S  A  L  E  Q  :  L  Q  L  C  S  Y  C  S  A  H  I  *  Q  N  P  K  *  R  N  L  G  V  I  F  Y  K  L  L  S  L  F  L  G  P  P  *  Q  *  K  S  D  V  N  P  G  K  M  A  G  L  D  Q  L  C  C  Q  H  L  M  V  Y  L  I  *  V  Q  I  L  A  F  M  V  M  G  *  E  W  Q  V  L  M  K  S  A  G  H  K  *  M  I  A  K  V  *  H  L  E  S  S  T  R  E  E  *  V  V  A  R  *  L  K  R  K  L  L  Q  E  N  Q  N  T  M  I  R  S  T  T  I  H  N  L  I  G  G  I  </first_frame>
            <second_frame>  E  E  V  L  S  T  P  S  N :   I  K  T  R  Y  G  K  T  A  S  S  S  E  N  T  I  *  S  *  K  A  A  E  N  V  K  *  Q  T  Y  L  A  Y  S  C  I  A  A  T  R  S  R  S  A  V  Y  V  A  Q  F  L  S  *  H  *  F  Y  S  K  S  T  R  L  E  *  C  R  G  N  R  K  T  Q  E  K  Q  C  R  A  C  *  H  A  T  Q  K  Q  R  V  P  I  K  K  *  S  R  K  L  S  S  W  M  F  *  *  Y  L  L  R  R  Q  D  E  R  G  S  H  W  W  E  R  A  *  W  N  W  R  I  Y  S  K  S  L  W  R  L  *  *  *  K  *  N  K  *  W  S  G  Y  R  *  V  A  P  G  Y  *  R  N  V  V  R  S  A  *  K  Y  R  N  K  W  L  K  R  V  Y  V  S  *  R  E  A  Y  L  S  Q  L  W  S  S :   S  N  C  A  V  T  V  Q  L  T  Y  N  K  I  Q  S  R  E  I  *  G  S  Y  F  T  S  F  *  V  C  S  W  V  P  R  D  N  R  N  Q  M  *  I  R  E  R  W  Q  G  W  T  N  C  V  V  S  T  S  W  C  I  S  Y  R  Y  K  S  W  H  S  W  *  W  G  E  N  G  R  S  *  *  N  Q  Q  G  T  S  E  *  *  R  R  F  S  I  *  K  A  R  L  E  R  N  R  W  *  R  D  S  *  R  G  S  F  S  K  R  I  K  T  Q  *  S  D  R  Q  Q  Y  T  I  *  *  A  E  F </second_frame>
            <third_frame>   R  K  F  F  R  R  Q  A   : I  S  K  Q  D  M  E  K  L  R  Q  A  L  K  T  L  S  E  A  E  K  Q  L  R  M  S  N  D  R  L  T  W  L  T  A  A  L  L  Q  L  A  P  D  Q  Q  Y  M  L  P  N  S  S  A  D  T  S  F  I  Q  S  P  L  D  L  N  N  A  G  G  T  E  R  P  R  K  S  N  V  E  H  A  D  M  L  H  K  N  R  G  F  P  S  K  S  R  V  E  N  F  Q  A  G  C  S  S  D  I  Y  S  D  A  R  M  K  G  V  H  I  G  G  K  G  H  N  G  T  G  E  F  T  Q  K  A  Y  G  V  S  S  D  K  N  R  T  S  S  G  Q  V  T  G  K  L  H  Q  D  I  E  E  M  W  L  E  V  L  E  N  I  E  I  N  G  L  K  E  F  M  Y  R  E  G  K  L  T  S  V  S  F  G  A   : A  P  T  V  Q  L  L  F  S  S  H  I  T  K  S  K  V  E  K  F  R  G  H  I  L  Q  A  F  E  S  V  L  G  S  P  V  T  I  E  I  R  C  E  S  G  K  D  G  R  A  G  P  I  V  L  S  A  P  H  G  V  S  H  I  G  T  N  P  G  I  H  G  N  G  V  R  M  A  G  P  D  E  I  S  R  A  Q  V  N  D  S  E  G  L  A  F  R  K  L  D  S  R  G  I  G  G  S  E  I  V  E  E  E  A  S  P  R  E  S  K  H  N  D  Q  I  D  N  N  T  Q  F  D  R  R  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73902" stop="73926"/>
                    <exon start="74251" stop="74817"/>
                    <exon start="76168" stop="76571"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>996</number_coding_nucleotides>
                  <number_encoded_amino_acids>332</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKFFRRQAISKQDMEKLRQALKTLSEAEKQLRMSNDRLTWLTAALLQLAPDQQYMLPNSSADTSFIQSPLDLNNAGGTERPRKSNVEHADMLHKNRGFPSKSRVENFQAGCSSDIYSDARMKGVHIGGKGHNGTGEFTQKAYGVSSDKNRTSSGQVTGKLHQDIEEMWLEVLENIEINGLKEFMYREGKLTSVSFGAAPTVQLLFSSHITKSKVEKFRGHILQAFESVLGSPVTIEIRCESGKDGRAGPIVLSAPHGVSHIGTNPGIHGNGVRMAGPDEISRAQVNDSEGLAFRKLDSRGIGGSEIVEEEASPRESKHNDQIDNNTQFDRRN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="76731" PGL_stop="78722"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76731" e_stop="76795"/>
            <exon e_start="77349" e_stop="77412"/>
            <exon e_start="78390" e_stop="78722"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="76731" e_stop="76795" e_length="65"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="76796" i_stop="77348" i_length="553"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="77349" e_stop="77412" e_length="64"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="77413" i_stop="78389" i_length="977"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="78390" e_stop="78722" e_length="333"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76731" stop="76795"/>
              <exon start="77349" stop="77412"/>
              <exon start="78390" stop="78722"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603283" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGGCAAAGTAGCTGGTCAAAACGCAAGGCTGTTTCTATCGCTGATAAGCTTGAACAAGAGAATTT : GAGATTAGAAGCAAGGTCAAGGAGCTTGCTTTGTTGGAAGGCTAGAAGAGTCACCCGCCGACAG : CTTTCGCGATTGAAAACAAGAAGTAGGAGGCCAAAGAGCTTACTGAGGTTCGTTTCTTGCGGAAAATGTCTCTCTGGTAGGTCTCCAAGGTAGCAGTGAAATGTATCAGATTAATTTCCAGTTTTAGTTCTACTATTTGTTCAACGTCAGTCAATCTTTGTTTAGAAGGTCAATTTTATTTTTTCCAATAATAAATGGAAGGTGCAACATTATTAATATATCTTTTTCTAGTTTAGCAATTTTCTCTTTTAGATGTCTACAGTAGCTCTCATGTACTACAACACTATTCTACATTCTTATAAATTATTGGGAATTCATTTTTCCTCTTTTACT</gDNA_template>
            <first_frame> R  Q  S  S  W  S  K  R  K  A  V  S  I  A  D  K  L  E  Q  E  N  L :   R  L  E  A  R  S  R  S  L  L  C  W  K  A  R  R  V  T  R  R  Q  :  L  S  R  L  K  T  R  S  R  R  P  K  S  L  L  R  F  V  S  C  G  K  C  L  S  G  R  S  P  R  *  Q  *  N  V  S  D  *  F  P  V  L  V  L  L  F  V  Q  R  Q  S  I  F  V  *  K  V  N  F  I  F  S  N  N  K  W  K  V  Q  H  Y  *  Y  I  F  F  *  F  S  N  F  L  F  *  M  S  T  V  A  L  M  Y  Y  N  T  I  L  H  S  Y  K  L  L  G  I  H  F  S  S  F  T </first_frame>
            <second_frame>  G  K  V  A  G  Q  N  A  R  L  F  L  S  L  I  S  L  N  K  R  I   : *  D  *  K  Q  G  Q  G  A  C  F  V  G  R  L  E  E  S  P  A  D  S :   F  R  D  *  K  Q  E  V  G  G  Q  R  A  Y  *  G  S  F  L  A  E  N  V  S  L  V  G  L  Q  G  S  S  E  M  Y  Q  I  N  F  Q  F  *  F  Y  Y  L  F  N  V  S  Q  S  L  F  R  R  S  I  L  F  F  P  I  I  N  G  R  C  N  I  I  N  I  S  F  S  S  L  A  I  F  S  F  R  C  L  Q  *  L  S  C  T  T  T  L  F  Y  I  L  I  N  Y  W  E  F  I  F  P  L  L   </second_frame>
            <third_frame>   A  K  *  L  V  K  T  Q  G  C  F  Y  R  *  *  A  *  T  R  E  F  :  E  I  R  S  K  V  K  E  L  A  L  L  E  G  *  K  S  H  P  P  T   : A  F  A  I  E  N  K  K  *  E  A  K  E  L  T  E  V  R  F  L  R  K  M  S  L  W  *  V  S  K  V  A  V  K  C  I  R  L  I  S  S  F  S  S  T  I  C  S  T  S  V  N  L  C  L  E  G  Q  F  Y  F  F  Q  *  *  M  E  G  A  T  L  L  I  Y  L  F  L  V  *  Q  F  S  L  L  D  V  Y  S  S  S  H  V  L  Q  H  Y  S  T  F  L  *  I  I  G  N  S  F  F  L  F  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76731" stop="76795"/>
                    <exon start="77349" stop="77412"/>
                    <exon start="78390" stop="78482"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RQSSWSKRKAVSIADKLEQENLRLEARSRSLLCWKARRVTRRQLSRLKTRSRRPKSLLRFVSCGKCLSGRSPR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="88358" PGL_stop="89082"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88358" e_stop="89082"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.968"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.968">
            <gDNA_exon_boundary e_start="88358" e_stop="89082" e_length="725"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88358" stop="89082"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U598464" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATAGAATATACCTATATTTTTCCTTTTTTGGTTCTCTTGTCAATCCATACAAGTTTTTTGTACAAATAATAAATACCCATTTCGTTCTTGGTCTTAAATTCAAACCTTTCTTGATAGTTTTTTATCAGAAAGGTAGAATCTTGGAGTTGTTTTTACAGTTTTTTTTTTGGTATACCCATATAGATATCTCACTGAAATATTGCAAAAATAAGATCAAGAAAGCATTTTTCAGTGGGAAACAAGAAAAGGGCTGGAGTTGATTTTTCAAGATTTTGGTGAAATTGGGTGTGGGAAATTGATGGCATCTGCTGCAATTTTCTCATCGTTGAGAAGACAAAGGTCGCCGACACTGGAAGCGTTCTTGGCGCCGGTGGATCTGACAGATGTTGGGTTGTTGCAAACTTTAACGGCGTTATCTTCTGAGCTGATTTCTGCATATTCAGGTAAAAGGCTGCCGTTTTATCAGCGGAAGAATTGTAAGTCTTTGTTAAGGAAAATTCAAGTATTTTCTGTTCTCTTGGAGTGTCTTCTTGAGAATAAAAAGAACAGAAGTAGTGGTTCTTCAGATTTGCCGTTTACAGCTTTTTTGTGCTTCAAGGAGTTGTATTTATTGCTTTACCGGTCGAAAATCTTGCTTGATTATTGCTCTTATTCAAGTAAGTTGTGGCTGTTGCTACAAAACCATTCGATTTCAGGTCATTTCCATGATTTGAACCAAGAAATC</gDNA_template>
            <first_frame> Y  R  I  Y  L  Y  F  S  F  F  G  S  L  V  N  P  Y  K  F  F  V  Q  I  I  N  T  H  F  V  L  G  L  K  F  K  P  F  L  I  V  F  Y  Q  K  G  R  I  L  E  L  F  L  Q  F  F  F  W  Y  T  H  I  D  I  S  L  K  Y  C  K  N  K  I  K  K  A  F  F  S  G  K  Q  E  K  G  W  S  *  F  F  K  I  L  V  K  L  G  V  G  N  *  W  H  L  L  Q  F  S  H  R  *  E  D  K  G  R  R  H  W  K  R  S  W  R  R  W  I  *  Q  M  L  G  C  C  K  L  *  R  R  Y  L  L  S  *  F  L  H  I  Q  V  K  G  C  R  F  I  S  G  R  I  V  S  L  C  *  G  K  F  K  Y  F  L  F  S  W  S  V  F  L  R  I  K  R  T  E  V  V  V  L  Q  I  C  R  L  Q  L  F  C  A  S  R  S  C  I  Y  C  F  T  G  R  K  S  C  L  I  I  A  L  I  Q  V  S  C  G  C  C  Y  K  T  I  R  F  Q  V  I  S  M  I  *  T  K  K   </first_frame>
            <second_frame>  I  E  Y  T  Y  I  F  P  F  L  V  L  L  S  I  H  T  S  F  L  Y  K  *  *  I  P  I  S  F  L  V  L  N  S  N  L  S  *  *  F  F  I  R  K  V  E  S  W  S  C  F  Y  S  F  F  F  G  I  P  I  *  I  S  H  *  N  I  A  K  I  R  S  R  K  H  F  S  V  G  N  K  K  R  A  G  V  D  F  S  R  F  W  *  N  W  V  W  E  I  D  G  I  C  C  N  F  L  I  V  E  K  T  K  V  A  D  T  G  S  V  L  G  A  G  G  S  D  R  C  W  V  V  A  N  F  N  G  V  I  F  *  A  D  F  C  I  F  R  *  K  A  A  V  L  S  A  E  E  L  *  V  F  V  K  E  N  S  S  I  F  C  S  L  G  V  S  S  *  E  *  K  E  Q  K  *  W  F  F  R  F  A  V  Y  S  F  F  V  L  Q  G  V  V  F  I  A  L  P  V  E  N  L  A  *  L  L  L  L  F  K  *  V  V  A  V  A  T  K  P  F  D  F  R  S  F  P  *  F  E  P  R  N  </second_frame>
            <third_frame>   *  N  I  P  I  F  F  L  F  W  F  S  C  Q  S  I  Q  V  F  C  T  N  N  K  Y  P  F  R  S  W  S  *  I  Q  T  F  L  D  S  F  L  S  E  R  *  N  L  G  V  V  F  T  V  F  F  L  V  Y  P  Y  R  Y  L  T  E  I  L  Q  K  *  D  Q  E  S  I  F  Q  W  E  T  R  K  G  L  E  L  I  F  Q  D  F  G  E  I  G  C  G  K  L  M  A  S  A  A  I  F  S  S  L  R  R  Q  R  S  P  T  L  E  A  F  L  A  P  V  D  L  T  D  V  G  L  L  Q  T  L  T  A  L  S  S  E  L  I  S  A  Y  S  G  K  R  L  P  F  Y  Q  R  K  N  C  K  S  L  L  R  K  I  Q  V  F  S  V  L  L  E  C  L  L  E  N  K  K  N  R  S  S  G  S  S  D  L  P  F  T  A  F  L  C  F  K  E  L  Y  L  L  L  Y  R  S  K  I  L  L  D  Y  C  S  Y  S  S  K  L  W  L  L  L  Q  N  H  S  I  S  G  H  F  H  D  L  N  Q  E  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88570" stop="89082"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>513</number_coding_nucleotides>
                  <number_encoded_amino_acids>171</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DQESIFQWETRKGLELIFQDFGEIGCGKLMASAAIFSSLRRQRSPTLEAFLAPVDLTDVGLLQTLTALSSELISAYSGKRLPFYQRKNCKSLLRKIQVFSVLLECLLENKKNRSSGSSDLPFTAFLCFKELYLLLYRSKILLDYCSYSSKLWLLLQNHSISGHFHDLNQEI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="89216" PGL_stop="90986"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="89216" e_stop="90986"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="89216" e_stop="90986" e_length="1771"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89216" stop="90986"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575342" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGTTGAAATTGTTTTCTTTCTTGAATGAGTTTGAGAATGGTGGTGTTCCTGACTATGCTCAGTTGTACTCTTTTTTTGTGGAAAAATTGGGGATTTGTAATCCTAGGAGTTGCAGAGTTGAGATTGAGTTTTTGGAGGAGCAGATTGTGAACCATGAAGGAGATATTGAGCCCACATCCTCAGTTCTCAACGGGTTTGTGGCGTTGATGCGATACTGCAGGTTTTTGCTATTTGGCTTTGAAGAGGATGATATGGGGTTGAGATTGGGTAAGCATAAGAAGCCGAAGAGAGGGCTGATTAGTCAAGAGATTGCAGAGACATTCATTTCTGTACCAAAGGACTTCTGTTGTCCGATATCGTTGGATTTGATGAGGGATCCAGTTATTGTGGCAACAGGGCAGACATATGATCGAGCTTCTATATCGAGGTGGATGGAGGAGGGTCACTGTACTTGCCCAAAGACAGGGCAGTTGCTTGATCATACCCGGCTTGTGCCAAACAGGGCTCTTAGGAATTTGATTATGCATTGGTGTGCTGCTCGCAAAATTCCCTATGACCCTCTGGAGAGTGGGGATCCATGTGTTGAATGTTTTCCATCAGCTTCACCTAGCAGGGCTGCACTAGAAGCTAATAAAGCCACAGCAGCTCTTCTGATTAAGCAGCTAGAGAGTGGGACGCAGATTGCAAAAACTATTGCTGCTCAGGAGATAAGACTTTTAGCTAAAACTGGTAAGGAGAATCGTGCATACATAGCTGAGGCTGGTGCAATCCCACATTTGAAGAATTTGCTTTCATCTCCAGATGCTGTGGCACAAGAAAATTCCGTCACTGCAATGCTTAACTTATCGATTTTTGATAAGAATAAAGGCCGAATTATTGATGAAGTAGGGTGTCTGGCTTTGATAGTTGGAGTTTTGAGATTTGGGCACACCACAGAGGCACGGGAAAATGCTGCAGCAACATTATTCAGTCTGTCAGCTGTTCATGACTATAAGAGGCAAATAGCAAAAGAAGATGGGGCAGTCGAGGCCTTAGCGGGTCTGTTGCGAGAAGGTTCTCCCAGAGGGAAGAAAGATGCAGTAACTGCTCTATTTAATTTATCCACCCACACAGATAATTGTGCGAGGATGATAGAGTCTGGAGCTGTTACTGCTCTAGTTGGAGCTTTGGGAAGTGAAGGTGTTGCTGAAGAAGCTGCTGGTGCATTGGCGCTGATTGTTAGGCAGCAAGTTGGTGCTACAGCTGTTGGCAATGAGGAAATGGCAGTAGCAGGGCTCATTGCAATGATGCGATGTGGGACACCAAGAGGGAAGGAGAATGCTGTTGCTGCATTACTTGAATTATGCCGCGGTGGTGGAGCAGCTGCTACTGAGAGGGTCTTGAAGGCGCCGTCATTAGCAAGTTTACTTCAGACGTTGCTCTTTACAGGAACAAAGCGCGCAAGGAGGAAAGCAGCATCGCTTGCTAGAGTATTCCAACGGTGTGAGCATGCAGCAGTTCATTATAGTGGGTTTGGTGTAGGATATGCATTTGCTGGAAACTCAGCTGCTGCTAGGGATTCAACTTTTCCTGGTGATGTCTCAGTGTCCATGTCCATTTCAGTTCCAGTATTATAGGGGTACTTACCACCATTCATCTTTTGTTCTTAGTTTTACTTGTAATATTCAAAAATTCTTTCATTGAAATATAAACGCGACAAAGAAAGAGAGAAATCATAGGAATACCACAAAATTCATGTGTTCTTAGCATTTTGCAGAATACAGTGTTTCAA</gDNA_template>
            <first_frame> G  *  N  C  F  L  S  *  M  S  L  R  M  V  V  F  L  T  M  L  S  C  T  L  F  L  W  K  N  W  G  F  V  I  L  G  V  A  E  L  R  L  S  F  W  R  S  R  L  *  T  M  K  E  I  L  S  P  H  P  Q  F  S  T  G  L  W  R  *  C  D  T  A  G  F  C  Y  L  A  L  K  R  M  I  W  G  *  D  W  V  S  I  R  S  R  R  E  G  *  L  V  K  R  L  Q  R  H  S  F  L  Y  Q  R  T  S  V  V  R  Y  R  W  I  *  *  G  I  Q  L  L  W  Q  Q  G  R  H  M  I  E  L  L  Y  R  G  G  W  R  R  V  T  V  L  A  Q  R  Q  G  S  C  L  I  I  P  G  L  C  Q  T  G  L  L  G  I  *  L  C  I  G  V  L  L  A  K  F  P  M  T  L  W  R  V  G  I  H  V  L  N  V  F  H  Q  L  H  L  A  G  L  H  *  K  L  I  K  P  Q  Q  L  F  *  L  S  S  *  R  V  G  R  R  L  Q  K  L  L  L  L  R  R  *  D  F  *  L  K  L  V  R  R  I  V  H  T  *  L  R  L  V  Q  S  H  I  *  R  I  C  F  H  L  Q  M  L  W  H  K  K  I  P  S  L  Q  C  L  T  Y  R  F  L  I  R  I  K  A  E  L  L  M  K  *  G  V  W  L  *  *  L  E  F  *  D  L  G  T  P  Q  R  H  G  K  M  L  Q  Q  H  Y  S  V  C  Q  L  F  M  T  I  R  G  K  *  Q  K  K  M  G  Q  S  R  P  *  R  V  C  C  E  K  V  L  P  E  G  R  K  M  Q  *  L  L  Y  L  I  Y  P  P  T  Q  I  I  V  R  G  *  *  S  L  E  L  L  L  L  *  L  E  L  W  E  V  K  V  L  L  K  K  L  L  V  H  W  R  *  L  L  G  S  K  L  V  L  Q  L  L  A  M  R  K  W  Q  *  Q  G  S  L  Q  *  C  D  V  G  H  Q  E  G  R  R  M  L  L  L  H  Y  L  N  Y  A  A  V  V  E  Q  L  L  L  R  G  S  *  R  R  R  H  *  Q  V  Y  F  R  R  C  S  L  Q  E  Q  S  A  Q  G  G  K  Q  H  R  L  L  E  Y  S  N  G  V  S  M  Q  Q  F  I  I  V  G  L  V  *  D  M  H  L  L  E  T  Q  L  L  L  G  I  Q  L  F  L  V  M  S  Q  C  P  C  P  F  Q  F  Q  Y  Y  R  G  T  Y  H  H  S  S  F  V  L  S  F  T  C  N  I  Q  K  F  F  H  *  N  I  N  A  T  K  K  E  R  N  H  R  N  T  T  K  F  M  C  S  *  H  F  A  E  Y  S  V  S  </first_frame>
            <second_frame>  V  E  I  V  F  F  L  E  *  V  *  E  W  W  C  S  *  L  C  S  V  V  L  F  F  C  G  K  I  G  D  L  *  S  *  E  L  Q  S  *  D  *  V  F  G  G  A  D  C  E  P  *  R  R  Y  *  A  H  I  L  S  S  Q  R  V  C  G  V  D  A  I  L  Q  V  F  A  I  W  L  *  R  G  *  Y  G  V  E  I  G  *  A  *  E  A  E  E  R  A  D  *  S  R  D  C  R  D  I  H  F  C  T  K  G  L  L  L  S  D  I  V  G  F  D  E  G  S  S  Y  C  G  N  R  A  D  I  *  S  S  F  Y  I  E  V  D  G  G  G  S  L  Y  L  P  K  D  R  A  V  A  *  S  Y  P  A  C  A  K  Q  G  S  *  E  F  D  Y  A  L  V  C  C  S  Q  N  S  L  *  P  S  G  E  W  G  S  M  C  *  M  F  S  I  S  F  T  *  Q  G  C  T  R  S  *  *  S  H  S  S  S  S  D  *  A  A  R  E  W  D  A  D  C  K  N  Y  C  C  S  G  D  K  T  F  S  *  N  W  *  G  E  S  C  I  H  S  *  G  W  C  N  P  T  F  E  E  F  A  F  I  S  R  C  C  G  T  R  K  F  R  H  C  N  A  *  L  I  D  F  *  *  E  *  R  P  N  Y  *  *  S  R  V  S  G  F  D  S  W  S  F  E  I  W  A  H  H  R  G  T  G  K  C  C  S  N  I  I  Q  S  V  S  C  S  *  L  *  E  A  N  S  K  R  R  W  G  S  R  G  L  S  G  S  V  A  R  R  F  S  Q  R  E  E  R  C  S  N  C  S  I  *  F  I  H  P  H  R  *  L  C  E  D  D  R  V  W  S  C  Y  C  S  S  W  S  F  G  K  *  R  C  C  *  R  S  C  W  C  I  G  A  D  C  *  A  A  S  W  C  Y  S  C  W  Q  *  G  N  G  S  S  R  A  H  C  N  D  A  M  W  D  T  K  R  E  G  E  C  C  C  C  I  T  *  I  M  P  R  W  W  S  S  C  Y  *  E  G  L  E  G  A  V  I  S  K  F  T  S  D  V  A  L  Y  R  N  K  A  R  K  E  E  S  S  I  A  C  *  S  I  P  T  V  *  A  C  S  S  S  L  *  W  V  W  C  R  I  C  I  C  W  K  L  S  C  C  *  G  F  N  F  S  W  *  C  L  S  V  H  V  H  F  S  S  S  I  I  G  V  L  T  T  I  H  L  L  F  L  V  L  L  V  I  F  K  N  S  F  I  E  I  *  T  R  Q  R  K  R  E  I  I  G  I  P  Q  N  S  C  V  L  S  I  L  Q  N  T  V  F  Q </second_frame>
            <third_frame>   L  K  L  F  S  F  L  N  E  F  E  N  G  G  V  P  D  Y  A  Q  L  Y  S  F  F  V  E  K  L  G  I  C  N  P  R  S  C  R  V  E  I  E  F  L  E  E  Q  I  V  N  H  E  G  D  I  E  P  T  S  S  V  L  N  G  F  V  A  L  M  R  Y  C  R  F  L  L  F  G  F  E  E  D  D  M  G  L  R  L  G  K  H  K  K  P  K  R  G  L  I  S  Q  E  I  A  E  T  F  I  S  V  P  K  D  F  C  C  P  I  S  L  D  L  M  R  D  P  V  I  V  A  T  G  Q  T  Y  D  R  A  S  I  S  R  W  M  E  E  G  H  C  T  C  P  K  T  G  Q  L  L  D  H  T  R  L  V  P  N  R  A  L  R  N  L  I  M  H  W  C  A  A  R  K  I  P  Y  D  P  L  E  S  G  D  P  C  V  E  C  F  P  S  A  S  P  S  R  A  A  L  E  A  N  K  A  T  A  A  L  L  I  K  Q  L  E  S  G  T  Q  I  A  K  T  I  A  A  Q  E  I  R  L  L  A  K  T  G  K  E  N  R  A  Y  I  A  E  A  G  A  I  P  H  L  K  N  L  L  S  S  P  D  A  V  A  Q  E  N  S  V  T  A  M  L  N  L  S  I  F  D  K  N  K  G  R  I  I  D  E  V  G  C  L  A  L  I  V  G  V  L  R  F  G  H  T  T  E  A  R  E  N  A  A  A  T  L  F  S  L  S  A  V  H  D  Y  K  R  Q  I  A  K  E  D  G  A  V  E  A  L  A  G  L  L  R  E  G  S  P  R  G  K  K  D  A  V  T  A  L  F  N  L  S  T  H  T  D  N  C  A  R  M  I  E  S  G  A  V  T  A  L  V  G  A  L  G  S  E  G  V  A  E  E  A  A  G  A  L  A  L  I  V  R  Q  Q  V  G  A  T  A  V  G  N  E  E  M  A  V  A  G  L  I  A  M  M  R  C  G  T  P  R  G  K  E  N  A  V  A  A  L  L  E  L  C  R  G  G  G  A  A  A  T  E  R  V  L  K  A  P  S  L  A  S  L  L  Q  T  L  L  F  T  G  T  K  R  A  R  R  K  A  A  S  L  A  R  V  F  Q  R  C  E  H  A  A  V  H  Y  S  G  F  G  V  G  Y  A  F  A  G  N  S  A  A  A  R  D  S  T  F  P  G  D  V  S  V  S  M  S  I  S  V  P  V  L  *  G  Y  L  P  P  F  I  F  C  S  *  F  Y  L  *  Y  S  K  I  L  S  L  K  Y  K  R  D  K  E  R  E  K  S  *  E  Y  H  K  I  H  V  F  L  A  F  C  R  I  Q  C  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0011K05.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89218" stop="90831"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1611</number_coding_nucleotides>
                  <number_encoded_amino_acids>537</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LKLFSFLNEFENGGVPDYAQLYSFFVEKLGICNPRSCRVEIEFLEEQIVNHEGDIEPTSSVLNGFVALMRYCRFLLFGFEEDDMGLRLGKHKKPKRGLISQEIAETFISVPKDFCCPISLDLMRDPVIVATGQTYDRASISRWMEEGHCTCPKTGQLLDHTRLVPNRALRNLIMHWCAARKIPYDPLESGDPCVECFPSASPSRAALEANKATAALLIKQLESGTQIAKTIAAQEIRLLAKTGKENRAYIAEAGAIPHLKNLLSSPDAVAQENSVTAMLNLSIFDKNKGRIIDEVGCLALIVGVLRFGHTTEARENAAATLFSLSAVHDYKRQIAKEDGAVEALAGLLREGSPRGKKDAVTALFNLSTHTDNCARMIESGAVTALVGALGSEGVAEEAAGALALIVRQQVGATAVGNEEMAVAGLIAMMRCGTPRGKENAVAALLELCRGGGAAATERVLKAPSLASLLQTLLFTGTKRARRKAASLARVFQRCEHAAVHYSGFGVGYAFAGNSAAARDSTFPGDVSVSMSISVPVL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 32 chains have been computed
$ 
$ memory statistics:
$ 51312 bytes spliced alignments in total
$ 24 spliced alignments have been stored
$ 2138 bytes was the average size of a spliced alignment
$ 20112 bytes predicted gene locations in total
$ 12 predicted gene locations have been stored
$ 1676 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 34 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:38:06
-->
