<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-29 02:06:41"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U575589" ref_strand="+" ref_description="SGN-U575589 Tomato 200607#2 [19 ESTs aligned] (*GB) gi|89363535|emb|CAJ84246.1| (e_value=5e-35) putative; (*ATH) AT2G35010.2 (e_value=3e-36) |; (*SWP) sp|P29445|THIO1_DICDI (e_value=5e-14) Thioredoxin-1 OS=Dictyostelium discoideum GN=trxA; ">
      <seq>acggccgggggccacaatccgtggaagagagcaaagatgagagggattctccggcggttgatcggcggcagacagccattcacatcatcacggcgttcttctgaattaggtcaaacattaatggtgtcatcagcagctacagtctcttactccactgtaactttcatggagaaacctaatctactttatggattcccaattgccgcaaacctcctctccgatttccagtctcttcacgttctcaatcaatatcgaaacttctccagtccatcttcctcaggtccatcaaatattgtatcaattgagtctgaagaacaattcaatacttcacttcgcaaagtacaagatgaatccttgcctgcaatattctacttcactgctgtctggtgtgggccctgtaggttgttatctcctgtgattggccaattaagtgagaaatatcctcatgtgacaacatataaagttgacattgacaaggaagggcttggaaatgcattgagcaagttgaacattacctcagtgcctacattgcacttctttcaaaatgggaaaaaaacatctgaagttatcggtgctgatgtccaactcttgaaagaaaccatggaagagctctacaaatgatatttcaaccttccagcaattcatgtttggctggaagttgatatttgcaacagtaaatcttgcgtttcactcttttatagtttcagtgatcattcatagaatttaaagtatgctcagttgtaacgttatccagtgccaagtatcgttctctctttctttatggtaaaaagtaacatgtttcctgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0024K05.1" temp_strand="-" temp_description="C02SLe0024K05.1  AC226514.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0024K05 sequenced_by:kribb upload_account_name:korea">
        <position start="24581" stop="16649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24280" g_stop="24012" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="280" r_length="269" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24011" i_stop="19879" i_length="4133">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19878" g_stop="19813" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="346" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19812" i_stop="19713" i_length="100">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19712" g_stop="19662" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="347" r_stop="397" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19661" i_stop="19384" i_length="278">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19383" g_stop="19304" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="477" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="19303" i_stop="18529" i_length="775">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="18528" g_stop="18484" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="522" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="18483" i_stop="17234" i_length="1250">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="17233" g_stop="16949" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="807" r_length="285" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0024K05.1" gen_strand="-" ref_id="SGN-U575589" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>796</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0024K05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U575589" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24280" e_stop="24012"/>
          <exon e_start="19878" e_stop="19813"/>
          <exon e_start="19712" e_stop="19662"/>
          <exon e_start="19383" e_stop="19304"/>
          <exon e_start="18528" e_stop="18484"/>
          <exon e_start="17233" e_stop="16949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACAATCCGTGGAAGAGAGCAAAGATGAGAGGGATTCTCCGGCGGTTGATCGGCGGCAGACAGCCATTCACATCATCACGGCGTTCTTCTGAATTAGGTCAAACATTAATGGTGTCATCAGCAGCTACAGTCTCTTACTCCACTGTAACTTTCATGGAGAAACCTAATCTACTTTATGGATTCCCAATTGCCGCAAACCTCCTCTCCGATTTCCAGTCTCTTCACGTTCTCAATCAATATCGAAACTTCTCCAGTCCATCTTCCTCAGGTTTGTCAGTTACACACTTCATTTCCGTTCCCATTCATTAATTTGCAGTTTGATGCACTAAGCTTCCGCTATGAGCGGGTCTACTGTACCAGCCTTACCTGCATTTCTACAAGATAATGTTCCTCAGCTCAAATCCATGTGACACAACAACTTCTAGGAGTACATTGAAATTGAAATAATACTAATTAGTACATATTTAAGAAGATTGTAAGCAAAGAAATAACGGCCTGTTCTTTTTCAAATATCAGATTCTCAAGCATAATAGACTTGGTGAAAATGGTTAAGAACAAAGAAAAGGTTTTCAAGACTATGTATATTTGCTTGATAAGTAATAAGATGTTTTATTGATGTAAATAAAAAGCCACCTTTAAGAGAATGCTGGAATAAATACATCAAAAAGGAGAATTTTACCGCGAATTATGAAAAAGATGAAAGTCAATCATAGCAGGCTATAAAACAAATGCTGATTGATTGTGTCAAACACAATGGAATAGAATGTGTATTTTATTATGTAAAATAAATTAGTCGGTGTTTACATCAATCCAATGAATACATTACATATTTTTTTACATTTGTTGTTTTCACTAAATCATAGTAAACTAATATATCCTTACCTCAATTTATCACTTAACCATAATAAATTAATATTATTTGGTGTAAATACTAGGTGCAGGTGCATGCAAGTTCTGAACATTAATTAGCGGTTGATTTATTATGATAATGGTGACTTGTGTTTTATTTTTCTAAGTGGCTATTTGTTGGAGAAAGTTGGAATTTAATGATATGTACTTCCACCTCAGAAATTTTCTGGAGAGGTTTTGGTGAAAATGGGAAATTTTCAGTTTTAATTAGTTCGGTGAATATTGTTGTATTTCTGTGAATGTAAAAAGGTAAAACCTTCAGGGAGAGCGAGATGTGTAGTAAGCGCATGTCACAAGTCTTAATCCTAGCTGTTGGACCAATTTTAGTTTTAAATGGAGAAGGGTAGGGGTATGAGCCCGTTGTCTACCTATATCGGCTTTTTTCGGCAATTTTTTTATATAACGGTGCAATGGTATTTTTTATTTTGATACTGAGAACTCCAGGGCGGCTATTGTTGAAGTAGGAAACAAGCTGATTTCTGTCTTAGCTCCTAATTCAACAAACAGTTAGGCAGTTTGCAGTGAATTTAGTGAGATTTTTCTATATTTGTAGGCTAAATATGAAACGTAGTTCTATTGCATTTATCTTTGACAAATCTAGTGGTTTTCGAGGTTGTCCTGTGGTTAATCAATGGAAATAGGTTAAATCTAGTTAGTCTTATGTCTGATTCTTGAAGTTGGTGATTCCAAGCCCGCCGTACTTTTGGTTGGTGACAATGGTAGTACAAGGGGATTGTGGAGTAGATGCACTTCATGAGTTTGAATCTTGTTGTGGATCAAGTACTTCTCAGTTATCCCAAAGAAAAGTTGACGATCACTGGACAGAGTTGACAATGACAAGTTTTAGAAATATAAGTCCAACAATTTTGGTTTTCTATTATTGAATGTCTGAAAGTCAAATTATTATGTTTAGAAGCTCACCTATTTGCTGTACATTTAGGAAAGGAAGAGGATAAAGAGAAATCAGCTCCAAATATATGGGATTTGTGACCGACTGTTTTGCTGAATTACCTACTGTTGGGAGTCTGAAAAATTGCTCCTTATACTAAAAGCTGAAGAATTGCTGAGATTTTCGTCAGCATTGTGTCATTTTAGGTGATGAAGTTCACATAGCAATAACCCTTGTCATTTGAGGATACTGGTGAAGATGTCCTTAATAAAATTTACTTGCCTGATATATTTTACAACAAGGATACTGCAGAGGGTGTATTTTATGTTAAGGAACTGAGGGATATTATAGGGTAACTAAGGGAGTGACTGGTATGGAGGAAAATAGTTTTTGAAAAATGTTTTCCAATTTCTTATGTTTGGTTGGTCAAATTTTAAAAAAATATTTTTCCTGAGGAAACAAGTTCCTTAAAATGAGGAAAATAATTTCCCTAGTGGAAATTTGAAAAACAAATGTCATTTCATGTTAATTGTCTCCTTTTCACCCTTCAACATATTCCACCCACCCCACCCTCGTAGCAACCATCTCTTTCAAGTTTCACCCCACACTCCTACCTCCAATCCCACCTTTCACAGTCTTTGTGTAGATTGTACACATGTTTTGGGATAAGATTTTTTCCTTATGTGCCAAACACAAGAGAACAAATAAGAAAATCATTTGTTTTTCCAAAAAACATTATCCAAGAAGTTCTTTTCCATGGAAAACATTTTCCTTCATACCAAGCACACCTTAAATAAATACTAGTTGTGTCTAAGGTTATAACACATATAAGTAGAGCTATGTACTTAGCTTCGATGGCTCATACGAGCTCATTTAAAAGTTTCCCTAGTATACTTTCAGAGGGGGATTATGACCAATTATGGTAAGAAAATATAGATGTGATGCCTTATTTGGAGTAAAGATAAGCCTGTTATAATCACCTGAAGTTTGGGTTCACAGGGTGGCGCTAGATTTTTTTTTTGGGAGAAGGTAACAGTTGTGTTTATTGACAATTCAGTAGATGGGTTGCACTGAAACCTTATTTACATCAAAATCAAAAAGACATCTAATTGACTCTAATTCTAACAAGATCCTAGGATGTCTATAATTGAGTCAGTCCTCTAAGTATATTTGTTTACACCAGAAACAAAAAAGTCTAACGCAATTTTGTTTGATCATCTGTAGATAGCGCCACCAATATGGAAGGCAGGGTGGCGCTAGATTTGTCCACATAGTATTGTGTAGTGACAAATATAATTTGTGTTTTAAGAGTGCTAGTTATGTAAGGGTGTCATTTAGTACGCTGGACACACATAGATAGTCTTGGGATAAAAAATTAGTATTGCTTTATCCCTTCTTTGGTTACTAATTCTGAGATAGTTATATCAAGATCAGAAATTAGTACCAGGATAAGTTATTCATGCCATAGGGGGGAACAATAGTACCAGAATTAGTTATTCGCGGAATAAAATAATGAAAATAAGAAAAATACCCATGAGGTCTCTCAAACCCTTTTTCTACTAAATAAGTTGAAGGATATTTTTGTAAATAGACAACTTCTTAGGAATTATGCAATGCATGTTATTTTTAGTGCAACAAATCAAACGGTCAATGAGAAATACAGTAGGATAACTAATCCCAGCTTCTTCAAACCAAACGACCCTTTTAGTGCAACAAATAAACGGTCAATAAGAAATACAGTAGGATAACTAATCCCAGCTTCTTGAAACCAAACGACCCCTTAGAGTAAGACATGTACTATTGGTGGTCCAAAAGAATCTCAGCATCCAACTTAAAATATTAAATCAACGGGTGGAACATCCCAGGATTAATTGAATCACTTTTTGAAACCCTTGCACAATCTATGAGTGACAAGTGGTGATTTTTACACTGTATCGCACAGTAACCTTGTTCTTAGGGTTTCCTTGTGGACTGGTACTTCTTTTGTTGAGAAGATTGAATAGTGGACTTCATGTAGGAGATATATGTGGCTCAACAGGCTGAAAAGTTGGTTTGGAGCTGAGAGAAGAGTAGGCTCAACAAGTTAACACATGAATTGGAGTGAAGTTCATGGCTCGATAGGCATGAAGAGGAAGTGATTATGCAAATGGTCTCTCTAAAGTTTGGCTTTGGTACCATGTGAAAAAATAGAAATTTGGACCTTGCTCAACTACAAAAGCTAGCTCATGAGATGAGAAATTGAGGATCACTCAAAACCATATAAAGAAATCAAATCATCCATCACTGATGATGTAAGGATCTACCATGTGGATTTGAATTCGATCAGTGAAGATCCTAAGTCTCTAACCCCGTTAATGTATTATTTTAAGCCCAACAGGAACTTGATATTTTTGGTATGTTTTGATTTTGTCGTCATACAAAATAAAAAAGAGAGATAGTGGTTTATCTAACCCCCACCCAAAAATGAACCAAGCGAAAGAAAGAACTCCAGTAGGAGTTTGATTTTTTTCTCACATCTTCTCTTTAATTACATATGGAAAAATAATTATGTTACATTAAGGCCCTTGCTGCCTGTTGACCATTTTGAAGCTTGTTTATTTTAGGTCCATCAAATATTGTATCAATTGAGTCTGAAGAACAATTCAATACTTCACTTCGCAAAGTACAAGGTATTTCTATGTGATTAGGCTCAATAATATACATGTTTAATTTTGTTTTGTTATGACTTATGGGTCTTATACTTGCTCAACATCTGTTTGTATGCTGCAGATGAATCCTTGCCTGCAATATTCTACTTCACTGCTGTCTGGTGTGGGCCCTGTAAGTTGGTTTATCATATTTATCTAGTGAATAATCTTTTTAATTTAATCGATGCATAATTTCAAAGTGGTAATGGTCTTCATACATTTTTATTCGCTTCATTTATGTTCCCTTGAAGATCGCTCATTGTACATCATGTCAAAGTAGCAATGAAAACTAAAAAAACAATACTCTACTTTTCTATTAGCTTATTTTAATTAATAATATAACTAACTTGACTAGAAAAGCATCCCTTTGTGCTATTAATTATTTACTTCTTTGCTCCATTCTTATTTCAGGTAGGTTGTTATCTCCTGTGATTGGCCAATTAAGTGAGAAATATCCTCATGTGACAACATATAAAGTTGACATTGACAAGGTAAAAAAACATCAGATTGCTTTCAGGAACCCTTATTAGTGTGTCATGGAACCCACTCTTCTGGGGTGCTGATACATGTCAATTCTTTCTTTCTTTCTTGGATAAGTTGAATATTTGTTTTTCTACGAATAAACCAATTTGGTGGTCATATACAAAAGGAAGCTACATCAGACCAGTAAGATGTATCTATATACTGAATTACAATATCAGGTCATCTACAAAGTAGTGTAATCCATTGTTTGCCAGATAGCAACACACGTCACTGAATGAACATCTGAAGATATTGTTCTTTGTTTGAATAAGTGACGTATCTTGGAGCTTGTAGCTTGCCATACCTTTCTACTGGGTACATTGTATGTTAGAGTTTATTTGCAGGTAACAGTTACAATGCTTTTAATATGTTTTGGTTGGACACGAGTTTATTAACTGCAGATAGCAAATGGTGAATTTATATTCACGATTTGACAAAAAGGAAGAATTGAGAGAAAGATCATCATATGTCTAATTCCTTAAATTTGTGGGTTTGACTTTTGATGATAGATGAAGTTTATGCTATGTGTTTTAGTTTGAACACTTATTCTTATTATCTTAAGATACTTAAATTTGTTACTTTTTAGCATTAGCTTAGAAAACTTTTTAGATAAGATTAATTTTTGTAATACTTTTGGACTCACTTGGAGCATTCTGTTTTTCCAAGCCACCTTGTTTAGTGGTTGATTAACTTGCATTCAATTAATCTTATCCACCTGTATGCTGAGCGTTTTTCCACATGCAGGAAGGGCTTGGAAATGCATTGAGCAAGTTGAACATTACCTCAGTGGTAAACATCTGTTCTTCTTCTTATTTTTTCAGTTAAACTTTATAACTGATTTAGAAAATCCTAGTTCACTATTTTCCATTTCTTGCAAATGTATGATACTGTTAATACCTATTCCAGGATAATATGAATATTGTGCTTATAAGTTATAGCTAACAATATTTAAATGATATGTTCTTTTTGTGCAATTTCAAAAATTATATGTTCATTTTGTGTATCATCGTTAACGTATACTTGACAATTTTTTGTCCTCGCTGGTAAAGATCTATTTAGCAAGAAGTAGTACTTTTTCTTCATGTGATCTGGTTTAGGAATGACATATGCATGCTTTCTACATTTATTTATTTAAATATCATAAGAGAATTTTAAGTTTGTTTTCAATGGGTGGCTAAAGTGATCAAGTAGGAATAACAATTTGGAGATCCTAGGTTCAAATCCCAGATACAACACTGGCTGTGAGTCCATCTAGTCTAAACCTTGTGAGTAGGTTCTCAGCCTACAACTGTGCTTGTGGGTTCTAACAGACTGCTCGGTGGATTAGTGTGTATGCAAGCTTACCCAACCACCATCATCATGTATGAGAAAAAAAAAAGCCAAGTTCAAATATGCCCGGAAAAATCAACTTCTAATAATGGATTTTCCAGTAAACATAATATGATGTTGTAACTTATCACCAAGAAAAGGTACATAGTATAGATTCAAGGCACGTCTTTCCAAATTAAGATATTTTGCTTAAAAAACAAAAAGGGTATCTTAGTGACTATGATCCTCTAGAAGGTGCTGTCAACGGCTTTGCATGTTTTGGTTATTTAGGTTCATACACTATCAGGTGATGCTTGGTTGGACAGGTCTCTCTAGAGGTCCGCTAGTTAAGTAGCTCGCTCACTGGCAAGCATGATTTATCCATTTTCCCATAATTTAAGGTTTTCTTTTAGATTTACTGTTGACAGAGTGGTGTTTTACATCTTAGTATTATCTGTATTTTCACCTGAATCAAAGAAAGATATTGTAAGTGGAGATTACAGATGATGTATATTCATCAAAGGGGAATAATCTGAATTGAAGAATGATAAGGATATCACAAGTGACTGAGAGCTCACTCCTTGTGCCATAAGGTTTATGAAATTAATTAAAATTGATGATTTTGACGATGTATATTAGTTCATGATCAGATTTGTTTGATAGAAACATTGAAAGGTGGTTACTTATACATGGTTCATCCATATAAAAATGAAACAATTCTTTGTATGCAGCCTACATTGCACTTCTTTCAAAATGGGAAAAAAACATCTGAAGTTATCGGTGCTGATGTCCAACTCTTGAAAGAAACCATGGAAGAGCTCTACAAATGATATTTCAACCTTCCAGCAATTCATGTTTGGCTGGAAGTTGATATTTGCAACAGTAAATCTTGCGTTTCACTCTTTTATAGTTTCAGTGATCATTCATAGAATTTAAAGTATGCTCAGTTGTAACGTTATCCAGTGCCAAGTATCGTTCTCTCTTTCTTTATGGTAAAAAGCAACATGTTTCCTGTG</genome_strand>
        <mrna_strand>CCACAATCCGTGGAAGAGAGCAAAGATGAGAGGGATTCTCCGGCGGTTGATCGGCGGCAGACAGCCATTCACATCATCACGGCGTTCTTCTGAATTAGGTCAAACATTAATGGTGTCATCAGCAGCTACAGTCTCTTACTCCACTGTAACTTTCATGGAGAAACCTAATCTACTTTATGGATTCCCAATTGCCGCAAACCTCCTCTCCGATTTCCAGTCTCTTCACGTTCTCAATCAATATCGAAACTTCTCCAGTCCATCTTCCTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCATCAAATATTGTATCAATTGAGTCTGAAGAACAATTCAATACTTCACTTCGCAAAGTACAAG....................................................................................................ATGAATCCTTGCCTGCAATATTCTACTTCACTGCTGTCTGGTGTGGGCCCT......................................................................................................................................................................................................................................................................................GTAGGTTGTTATCTCCTGTGATTGGCCAATTAAGTGAGAAATATCCTCATGTGACAACATATAAAGTTGACATTGACAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGGCTTGGAAATGCATTGAGCAAGTTGAACATTACCTCAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTACATTGCACTTCTTTCAAAATGGGAAAAAAACATCTGAAGTTATCGGTGCTGATGTCCAACTCTTGAAAGAAACCATGGAAGAGCTCTACAAATGATATTTCAACCTTCCAGCAATTCATGTTTGGCTGGAAGTTGATATTTGCAACAGTAAATCTTGCGTTTCACTCTTTTATAGTTTCAGTGATCATTCATAGAATTTAAAGTATGCTCAGTTGTAACGTTATCCAGTGCCAAGTATCGTTCTCTCTTTCTTTATGGTAAAAAGTAACATGTTTCCTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U587609" ref_strand="+" ref_description="SGN-U587609 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|89363535|emb|CAJ84246.1| (e_value=2e-17) putative; (*ATH) AT1G31020.1 (e_value=9e-19)  Symbol: None | thioredoxin o (TRXO2), similar to thioredoxin 2 from Saccharomyces cerevisiae GI:173050, 3'-end of protein contains similarity to thioredoxins; contains Pfam profile: PF00085 Thioredoxin; identical to cDNA thioredoxin o (TRXO2) GI:150... ; ">
      <seq>gcaaagatgagagggattctccggcggttgatcggcggcagacagccattcacatcatcacggcgttcttctgaattaggtcaaacattaatggtgtcatcagcagctacagtctcttactccactgtaactttcatggagaaacctaatctactttatggattcccaattgccgcaaacctcctctccgatttccagtctcttcacgttctcaatcaatatcgaaacttctccagtccatcttcctcaggtccatcaaatattgtatcaattgagtctgaagaacaattcaatacttcacttcgcaaagtacaagatgaatccttgcctgcaatattctacttcactgctgtctggtgtgggccctgtaggttgttatctcctgtgattggccaattaagtgagaaatatcctcatgtgacaacatataaagttgacattgacaaggtaaaaaaacatcagattgctttcaggaacccttattagtgtgtcatggaacccactcttctggggtgctgatacatgtcaattctttctttctttcttggataagttgaatatttgtttttctacgaataaaccaatttggtggtcatatacaaaaggaagctacatcagaccagtaagatgtatctatatactgaattacaatatcaggtcatctacaaagtagtgtaatccattgtttgccagatagcaacacacgtcactgaatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0024K05.1" temp_strand="-" temp_description="C02SLe0024K05.1  AC226514.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0024K05 sequenced_by:kribb upload_account_name:korea">
        <position start="24561" stop="18733"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24261" g_stop="24012" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="250" r_length="250" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24011" i_stop="19879" i_length="4133">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19878" g_stop="19813" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="316" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19812" i_stop="19713" i_length="100">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="19712" g_stop="19662" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="367" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="19661" i_stop="19384" i_length="278">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19383" g_stop="19033" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="718" r_length="351" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0024K05.1" gen_strand="-" ref_id="SGN-U587609" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>718</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0024K05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U587609" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24261" e_stop="24012"/>
          <exon e_start="19878" e_stop="19813"/>
          <exon e_start="19712" e_stop="19662"/>
          <exon e_start="19383" e_stop="19033"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAGATGAGAGGGATTCTCCGGCGGTTGATCGGCGGCAGACAGCCATTCACATCATCACGGCGTTCTTCTGAATTAGGTCAAACATTAATGGTGTCATCAGCAGCTACAGTCTCTTACTCCACTGTAACTTTCATGGAGAAACCTAATCTACTTTATGGATTCCCAATTGCCGCAAACCTCCTCTCCGATTTCCAGTCTCTTCACGTTCTCAATCAATATCGAAACTTCTCCAGTCCATCTTCCTCAGGTTTGTCAGTTACACACTTCATTTCCGTTCCCATTCATTAATTTGCAGTTTGATGCACTAAGCTTCCGCTATGAGCGGGTCTACTGTACCAGCCTTACCTGCATTTCTACAAGATAATGTTCCTCAGCTCAAATCCATGTGACACAACAACTTCTAGGAGTACATTGAAATTGAAATAATACTAATTAGTACATATTTAAGAAGATTGTAAGCAAAGAAATAACGGCCTGTTCTTTTTCAAATATCAGATTCTCAAGCATAATAGACTTGGTGAAAATGGTTAAGAACAAAGAAAAGGTTTTCAAGACTATGTATATTTGCTTGATAAGTAATAAGATGTTTTATTGATGTAAATAAAAAGCCACCTTTAAGAGAATGCTGGAATAAATACATCAAAAAGGAGAATTTTACCGCGAATTATGAAAAAGATGAAAGTCAATCATAGCAGGCTATAAAACAAATGCTGATTGATTGTGTCAAACACAATGGAATAGAATGTGTATTTTATTATGTAAAATAAATTAGTCGGTGTTTACATCAATCCAATGAATACATTACATATTTTTTTACATTTGTTGTTTTCACTAAATCATAGTAAACTAATATATCCTTACCTCAATTTATCACTTAACCATAATAAATTAATATTATTTGGTGTAAATACTAGGTGCAGGTGCATGCAAGTTCTGAACATTAATTAGCGGTTGATTTATTATGATAATGGTGACTTGTGTTTTATTTTTCTAAGTGGCTATTTGTTGGAGAAAGTTGGAATTTAATGATATGTACTTCCACCTCAGAAATTTTCTGGAGAGGTTTTGGTGAAAATGGGAAATTTTCAGTTTTAATTAGTTCGGTGAATATTGTTGTATTTCTGTGAATGTAAAAAGGTAAAACCTTCAGGGAGAGCGAGATGTGTAGTAAGCGCATGTCACAAGTCTTAATCCTAGCTGTTGGACCAATTTTAGTTTTAAATGGAGAAGGGTAGGGGTATGAGCCCGTTGTCTACCTATATCGGCTTTTTTCGGCAATTTTTTTATATAACGGTGCAATGGTATTTTTTATTTTGATACTGAGAACTCCAGGGCGGCTATTGTTGAAGTAGGAAACAAGCTGATTTCTGTCTTAGCTCCTAATTCAACAAACAGTTAGGCAGTTTGCAGTGAATTTAGTGAGATTTTTCTATATTTGTAGGCTAAATATGAAACGTAGTTCTATTGCATTTATCTTTGACAAATCTAGTGGTTTTCGAGGTTGTCCTGTGGTTAATCAATGGAAATAGGTTAAATCTAGTTAGTCTTATGTCTGATTCTTGAAGTTGGTGATTCCAAGCCCGCCGTACTTTTGGTTGGTGACAATGGTAGTACAAGGGGATTGTGGAGTAGATGCACTTCATGAGTTTGAATCTTGTTGTGGATCAAGTACTTCTCAGTTATCCCAAAGAAAAGTTGACGATCACTGGACAGAGTTGACAATGACAAGTTTTAGAAATATAAGTCCAACAATTTTGGTTTTCTATTATTGAATGTCTGAAAGTCAAATTATTATGTTTAGAAGCTCACCTATTTGCTGTACATTTAGGAAAGGAAGAGGATAAAGAGAAATCAGCTCCAAATATATGGGATTTGTGACCGACTGTTTTGCTGAATTACCTACTGTTGGGAGTCTGAAAAATTGCTCCTTATACTAAAAGCTGAAGAATTGCTGAGATTTTCGTCAGCATTGTGTCATTTTAGGTGATGAAGTTCACATAGCAATAACCCTTGTCATTTGAGGATACTGGTGAAGATGTCCTTAATAAAATTTACTTGCCTGATATATTTTACAACAAGGATACTGCAGAGGGTGTATTTTATGTTAAGGAACTGAGGGATATTATAGGGTAACTAAGGGAGTGACTGGTATGGAGGAAAATAGTTTTTGAAAAATGTTTTCCAATTTCTTATGTTTGGTTGGTCAAATTTTAAAAAAATATTTTTCCTGAGGAAACAAGTTCCTTAAAATGAGGAAAATAATTTCCCTAGTGGAAATTTGAAAAACAAATGTCATTTCATGTTAATTGTCTCCTTTTCACCCTTCAACATATTCCACCCACCCCACCCTCGTAGCAACCATCTCTTTCAAGTTTCACCCCACACTCCTACCTCCAATCCCACCTTTCACAGTCTTTGTGTAGATTGTACACATGTTTTGGGATAAGATTTTTTCCTTATGTGCCAAACACAAGAGAACAAATAAGAAAATCATTTGTTTTTCCAAAAAACATTATCCAAGAAGTTCTTTTCCATGGAAAACATTTTCCTTCATACCAAGCACACCTTAAATAAATACTAGTTGTGTCTAAGGTTATAACACATATAAGTAGAGCTATGTACTTAGCTTCGATGGCTCATACGAGCTCATTTAAAAGTTTCCCTAGTATACTTTCAGAGGGGGATTATGACCAATTATGGTAAGAAAATATAGATGTGATGCCTTATTTGGAGTAAAGATAAGCCTGTTATAATCACCTGAAGTTTGGGTTCACAGGGTGGCGCTAGATTTTTTTTTTGGGAGAAGGTAACAGTTGTGTTTATTGACAATTCAGTAGATGGGTTGCACTGAAACCTTATTTACATCAAAATCAAAAAGACATCTAATTGACTCTAATTCTAACAAGATCCTAGGATGTCTATAATTGAGTCAGTCCTCTAAGTATATTTGTTTACACCAGAAACAAAAAAGTCTAACGCAATTTTGTTTGATCATCTGTAGATAGCGCCACCAATATGGAAGGCAGGGTGGCGCTAGATTTGTCCACATAGTATTGTGTAGTGACAAATATAATTTGTGTTTTAAGAGTGCTAGTTATGTAAGGGTGTCATTTAGTACGCTGGACACACATAGATAGTCTTGGGATAAAAAATTAGTATTGCTTTATCCCTTCTTTGGTTACTAATTCTGAGATAGTTATATCAAGATCAGAAATTAGTACCAGGATAAGTTATTCATGCCATAGGGGGGAACAATAGTACCAGAATTAGTTATTCGCGGAATAAAATAATGAAAATAAGAAAAATACCCATGAGGTCTCTCAAACCCTTTTTCTACTAAATAAGTTGAAGGATATTTTTGTAAATAGACAACTTCTTAGGAATTATGCAATGCATGTTATTTTTAGTGCAACAAATCAAACGGTCAATGAGAAATACAGTAGGATAACTAATCCCAGCTTCTTCAAACCAAACGACCCTTTTAGTGCAACAAATAAACGGTCAATAAGAAATACAGTAGGATAACTAATCCCAGCTTCTTGAAACCAAACGACCCCTTAGAGTAAGACATGTACTATTGGTGGTCCAAAAGAATCTCAGCATCCAACTTAAAATATTAAATCAACGGGTGGAACATCCCAGGATTAATTGAATCACTTTTTGAAACCCTTGCACAATCTATGAGTGACAAGTGGTGATTTTTACACTGTATCGCACAGTAACCTTGTTCTTAGGGTTTCCTTGTGGACTGGTACTTCTTTTGTTGAGAAGATTGAATAGTGGACTTCATGTAGGAGATATATGTGGCTCAACAGGCTGAAAAGTTGGTTTGGAGCTGAGAGAAGAGTAGGCTCAACAAGTTAACACATGAATTGGAGTGAAGTTCATGGCTCGATAGGCATGAAGAGGAAGTGATTATGCAAATGGTCTCTCTAAAGTTTGGCTTTGGTACCATGTGAAAAAATAGAAATTTGGACCTTGCTCAACTACAAAAGCTAGCTCATGAGATGAGAAATTGAGGATCACTCAAAACCATATAAAGAAATCAAATCATCCATCACTGATGATGTAAGGATCTACCATGTGGATTTGAATTCGATCAGTGAAGATCCTAAGTCTCTAACCCCGTTAATGTATTATTTTAAGCCCAACAGGAACTTGATATTTTTGGTATGTTTTGATTTTGTCGTCATACAAAATAAAAAAGAGAGATAGTGGTTTATCTAACCCCCACCCAAAAATGAACCAAGCGAAAGAAAGAACTCCAGTAGGAGTTTGATTTTTTTCTCACATCTTCTCTTTAATTACATATGGAAAAATAATTATGTTACATTAAGGCCCTTGCTGCCTGTTGACCATTTTGAAGCTTGTTTATTTTAGGTCCATCAAATATTGTATCAATTGAGTCTGAAGAACAATTCAATACTTCACTTCGCAAAGTACAAGGTATTTCTATGTGATTAGGCTCAATAATATACATGTTTAATTTTGTTTTGTTATGACTTATGGGTCTTATACTTGCTCAACATCTGTTTGTATGCTGCAGATGAATCCTTGCCTGCAATATTCTACTTCACTGCTGTCTGGTGTGGGCCCTGTAAGTTGGTTTATCATATTTATCTAGTGAATAATCTTTTTAATTTAATCGATGCATAATTTCAAAGTGGTAATGGTCTTCATACATTTTTATTCGCTTCATTTATGTTCCCTTGAAGATCGCTCATTGTACATCATGTCAAAGTAGCAATGAAAACTAAAAAAACAATACTCTACTTTTCTATTAGCTTATTTTAATTAATAATATAACTAACTTGACTAGAAAAGCATCCCTTTGTGCTATTAATTATTTACTTCTTTGCTCCATTCTTATTTCAGGTAGGTTGTTATCTCCTGTGATTGGCCAATTAAGTGAGAAATATCCTCATGTGACAACATATAAAGTTGACATTGACAAGGTAAAAAAACATCAGATTGCTTTCAGGAACCCTTATTAGTGTGTCATGGAACCCACTCTTCTGGGGTGCTGATACATGTCAATTCTTTCTTTCTTTCTTGGATAAGTTGAATATTTGTTTTTCTACGAATAAACCAATTTGGTGGTCATATACAAAAGGAAGCTACATCAGACCAGTAAGATGTATCTATATACTGAATTACAATATCAGGTCATCTACAAAGTAGTGTAATCCATTGTTTGCCAGATAGCAACACACGTCACTGAATGAA</genome_strand>
        <mrna_strand>GCAAAGATGAGAGGGATTCTCCGGCGGTTGATCGGCGGCAGACAGCCATTCACATCATCACGGCGTTCTTCTGAATTAGGTCAAACATTAATGGTGTCATCAGCAGCTACAGTCTCTTACTCCACTGTAACTTTCATGGAGAAACCTAATCTACTTTATGGATTCCCAATTGCCGCAAACCTCCTCTCCGATTTCCAGTCTCTTCACGTTCTCAATCAATATCGAAACTTCTCCAGTCCATCTTCCTCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCATCAAATATTGTATCAATTGAGTCTGAAGAACAATTCAATACTTCACTTCGCAAAGTACAAG....................................................................................................ATGAATCCTTGCCTGCAATATTCTACTTCACTGCTGTCTGGTGTGGGCCCT......................................................................................................................................................................................................................................................................................GTAGGTTGTTATCTCCTGTGATTGGCCAATTAAGTGAGAAATATCCTCATGTGACAACATATAAAGTTGACATTGACAAGGTAAAAAAACATCAGATTGCTTTCAGGAACCCTTATTAGTGTGTCATGGAACCCACTCTTCTGGGGTGCTGATACATGTCAATTCTTTCTTTCTTTCTTGGATAAGTTGAATATTTGTTTTTCTACGAATAAACCAATTTGGTGGTCATATACAAAAGGAAGCTACATCAGACCAGTAAGATGTATCTATATACTGAATTACAATATCAGGTCATCTACAAAGTAGTGTAATCCATTGTTTGCCAGATAGCAACACACGTCACTGAATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U601028" ref_strand="+" ref_description="SGN-U601028 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>ccatactaaaaagaaatgctcttcaaaagaggaaaacttacaaacagacagcatttacattgaaagggtggtatattcaccctatgtatgaaatctaaaagaagaaggttaaggaatacacaaatccaagttgatcctaatgctacttttttcttttcaaggttcttcatattttgacctcattcctactctatagttatttccaagatagtggtaagtctgggtttctcgtatctctttagatacagagatgaacatacaacacttacagatgacattgccatgcatgcaccagctacccatggtggcaactccagttttagaaaagggaagaaaaccccagcagccacggggatggaaatcacattgtacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0024K05.1" temp_strand="-" temp_description="C02SLe0024K05.1  AC226514.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0024K05 sequenced_by:kribb upload_account_name:korea">
        <position start="44686" stop="43716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44387" g_stop="44014" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="374" r_length="374" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0024K05.1" gen_strand="-" ref_id="SGN-U601028" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>374</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0024K05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U601028" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44387" e_stop="44014"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATACTAAAAAGAAATGCTCTTCAAAAGAGGAAAACTTACAAACAGACAGCATTTACATTGAAAGGGTGGTATATTCACCCTATGTATGAAATCTAAAAGAAGAAGGTTAAGGAATACACAAATCCAAGTTGATCCTAATGCTACTTTTTTCTTTTCAAGGCTCTTCATATTTTGATCTCATTCCTACTCTATAGTTATTTCCAAGATAGTGGTAAGTCTGGGTTTCTTGTATCTCTTTAGATACAGAGATGAACATACAACACTTACAGATGACATTGCCATGCATGCACCAGCTACCCATGGTGGCAACTCCAGTTTTAGAAAAGGGAAGAAAACCCCAGCAGCCACGGGGATGGAAATCACATTGTACGC</genome_strand>
        <mrna_strand>CCATACTAAAAAGAAATGCTCTTCAAAAGAGGAAAACTTACAAACAGACAGCATTTACATTGAAAGGGTGGTATATTCACCCTATGTATGAAATCTAAAAGAAGAAGGTTAAGGAATACACAAATCCAAGTTGATCCTAATGCTACTTTTTTCTTTTCAAGGTTCTTCATATTTTGACCTCATTCCTACTCTATAGTTATTTCCAAGATAGTGGTAAGTCTGGGTTTCTCGTATCTCTTTAGATACAGAGATGAACATACAACACTTACAGATGACATTGCCATGCATGCACCAGCTACCCATGGTGGCAACTCCAGTTTTAGAAAAGGGAAGAAAACCCCAGCAGCCACGGGGATGGAAATCACATTGTACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U571954" ref_strand="+" ref_description="SGN-U571954 Tomato 200607#2 [27 ESTs aligned] (*GB) gi|147862940|emb|CAN83206.1| (e_value=0) hypothetical; (*ATH) AT4G22285.1 (e_value=0) |; (*SWP) sp|Q3TIX9|SNUT2_MOUSE (e_value=2e-134) U4/U6.U5 tri-snRNP-associated protein 2 OS=Mus musculus GN=Usp39; ">
      <seq>agggcgattggcggccaatcggccgaattgatcggctctttgcttcttcttcttcttcttctcgagctttctgcaaaaattgtatccagaacgttaattttccagtgaatcttaaatagtttggagtgagaagagaatgacaaagaagcgagaagtagaagatggcgtggtgcctgcggagtcgactgcaaaacggcagaaggtaatggatcagtcgtctccctctcttccaccagttgcttttgagaatccacttcttccacttgcatcttatgatgatgatgaagacgacgaggatgatggtacgaaaggacacattcctgagcaagttataaataatggtggagacaaggagcaaaatggctactcatctgacgataaagaagatgaggatgatggtagaagccaagggaagcgaaatcgtgcaattgagattaggagggactgcccctatcttgatactgtgaacagacaggtattggattttgacttcgagaaattttgttcggtctctcttacaaatttaaatgtgtatgcatgtttagtctgtgggaaatattttcaaggaaggggaccaaaatctcatgcgtatacacacagtcttgaagcaggacaccacgtgttcatcaatttacgaacagagaaagtttattgtcttcctgatggatatgaagtcatagatccatcgcttgatgacattattcatgtgctgaatccaagatttgctcaagaacaggttaagcaactcgataagagccgacagtggtctagggcacttgatgggtctgattatcttcctggaacggttgggctgaataacatcaaggagactgattttgtcaatgtcacgattcagtcattgatgcgagtaactcccttgagaaacttctttcttatccctgagaattatcaacacaatagatctcctcttgttcatagatttggagagcttacccgaaagatttggcacgcaaggaactttaaaggacaggtcagtccgcatgagttcttgcaagcggttatgaaagctagtaaaaaacgttttcggataggtgcccagtctgaccctgttgaatttatgtcatggctcctgaatacccttcacacggagcttagaagttccaaaaaaggcagtagcataatccatcggtgctttcagggggaattggaggttgtgaaagagatgcataatagatctattgctgaaaagagggagaatggggaggatggtgaacatgaatctcacaatactggcatggaaactagcagaatgccttttataatgcttggacttgatttgccaccacctcctctttttacagatgtcatggaaaagaatattattccccaggttccattattcaacatactaaagaaatttgatggtgatactgtgactgaagttgtaaggccccgtatagcaaggatgagataccgtgtgacaaaattgccaaagtatctaattctccacatgcgtaggtttacaaagaacaatttctttatggagaaaaatcctacacttgtgaacttcccggtgaagaatctagagctcaaggattatattcccctgccagcaccaaaggagaatgagaaacttcgctcaaaatatgatttgattgctaatattgttcatgatggaaagccaggcgaaggctcatacagagtgtttgtccaacgaaaatcagaagaactttggtatgagatgcaagacctacatgtttctgaaactcttccccagatggttgcgctttctgagacttatatgcagatatatgagcagcatcagcagtaatgaacctcacaagtaacatcagaaacatcaacctctgcctctcctcttctttttgaaatgccaatttcgacttttagatatctaatgaagagtattctactcgttgagggatagtgatctttgcgatttatttttcctttgttgtatgtaaatcctgctgtttttgtgttgcttatgcttaagattactattacatggggaattatgagaactctagctttggatttatccacttgctattttttcttccatttgtaggaatatatatcttcttatgaattccaactgaaattttagtaaattaagattggagttagattttaacttcttcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0024K05.1" temp_strand="+" temp_description="C02SLe0024K05.1  AC226514.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0024K05 sequenced_by:kribb upload_account_name:korea">
        <position start="44961" stop="52925"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45261" g_stop="45341" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="105" r_length="80" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45342" i_stop="47360" i_length="2019">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47361" g_stop="47730" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="475" r_length="370" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47731" i_stop="48202" i_length="472">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="48203" g_stop="48447" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="720" r_length="245" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="48448" i_stop="48596" i_length="149">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="48597" g_stop="48681" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="721" r_stop="805" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="48682" i_stop="48774" i_length="93">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="48775" g_stop="48960" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="806" r_stop="991" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="48961" i_stop="49036" i_length="76">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="49037" g_stop="49204" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="992" r_stop="1159" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="49205" i_stop="49293" i_length="89">
            <donor d_prob="0.950" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="49294" g_stop="49485" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1160" r_stop="1351" r_length="192" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="49486" i_stop="50917" i_length="1432">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="50918" g_stop="51089" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1352" r_stop="1523" r_length="172" r_score="0.994"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="51090" i_stop="51874" i_length="785">
            <donor d_prob="0.945" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="51875" g_stop="52046" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1524" r_stop="1695" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="52047" i_stop="52195" i_length="149">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="52196" g_stop="52625" g_length="430"/>
          <reference_exon_boundary r_type="cDNA" r_start="1696" r_stop="2125" r_length="430" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0024K05.1" gen_strand="+" ref_id="SGN-U571954" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2101</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0024K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571954" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45261" e_stop="45341"/>
          <exon e_start="47361" e_stop="47730"/>
          <exon e_start="48203" e_stop="48447"/>
          <exon e_start="48597" e_stop="48681"/>
          <exon e_start="48775" e_stop="48960"/>
          <exon e_start="49037" e_stop="49204"/>
          <exon e_start="49294" e_stop="49485"/>
          <exon e_start="50918" e_stop="51089"/>
          <exon e_start="51875" e_stop="52046"/>
          <exon e_start="52196" e_stop="52625"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGTATCGGCTCTTTGCTTCTTCTTCTTCTTCTTCTCGAGCTTTCTGCAAAAATTGTATCCAGAACGTTAATTTTCCAGGTTTTATTCTCACTCTAAATTCTAGCTGCAATCTTTGTAATCCTCAAATACTTGAAATTGTGTTTTGTTTTATCCAATCATTTTGAGGAGATAAGTAAAAGTTCTTTTTTTTCTTTGGGTATGTTAGTTCTTGTGTTTTTGGGTATGATTTCGTAGTAATTTGGACATTTAGAGTATTGATACTGCTTCTTGCAACTGAGAACCATATACCAATTTGATCTATTTGCTTGAGGAAATGAACTAGATACGTATTATCGGAGTTGGGGAATGTGGGATTAGTATTACTATTTAGCACCTTGCGTTTTCAATTCTAGGATGATGTTAGCAGCTTTTGGTTTTGAATTTTCTGGCAATAAATTGCTATTTCTGGTTGTAGGGTTAGAGGGTTCCTAATAAGTGTTTTGCAGCCTGGCTCCGCCACTAGTGATAGGACTTGCTAAGTAAATTGTTGAATAAGATGTAACAAGGAGCAAAAGGCAAAAGGATTTAAGTTAAGAGAGTAGAAAATAGCTGGAAAATGATAAAGCTGTGGGAATTTCCAATATATGGTGGATCTGGGTGCATTTCTAGATTCTAGTAGTAAATATGTACACATTGGATGGGATGCTTTTCTTATGAGGAGACAAAAATCTTCAAAATTGTTACTTTGAGTTCCATGCAGTTACCAAATGGTAGCTGCTCCCAAAGTATGATTGGTCAGTCAATGTCTTTGATCCTTCTCAAGTTGGTACATGTGACAAAAGGATAAAGGAAAAATGACATTGAGTTATTGTTTGAACCTTGTGTCATATCAAGAAAAATAATGTTTTTTGTTCTACGGAAGTAGAGATAACGTCTGTGTACATTCTCCCCTCCCAGACCCCACGTGTGAATGTGGGATTACATTAGATATGTTGTAGCTGTTGTTGTTTATTAAACATAAAAATGTAACTTTTTTTTACATTTCATAAAAGCATGACTGCAATAGCATGATTGTTATATACCTCAACCATGTGTCCTCTGTGCTAACTGCTAAGCATGTCAAATATGTGCCTTTCTTGGGACTTCTGATCCTGCAATATCAGCCTTAGTTCTTACATTTGTTCTTTTTTCATGATGTTGATATATTTCCACTGTGTTCACCTTAATCATTGATCATTCTATACCAACACCAGCTTATGGGTCCACTGATTTATGCTACAGTTGCAAACTAAAAGTGCCAGTATATGCACTAGTCTCGGTTTTTGTGTGGTATTAATAAGGGTAACTGATACTTTATTCTGTTCTGTCGGGGCATACCAATTAACCTTTTTGATTCTTGTGATGTCGCCGAGAAGGAAATAATGATAATATTTTAGTGCAAGTAGTCTGTATTGTATCATCAATCACTTAGCCAGAATTAAGAGTGGTAGGACCTAGGAGATGGCAGGTAATGCCTTAGTGTTTGTTTTGGTGCTTACAAGATTGTGAGAATTGTATAAATGTCTTGCCTAAAAATGGGTGTGGCTAGATAGAGAGGCAACTTGCAGGCCATGACTGTTGTTCTTGAGAGGACACAAGAAAAAGGAGATGAGAGTTAATGAGTTCGTTGATGAGTTAAAGAGTTCTTTTTCCTTCATGTTTAGCTTGAGTAATCAGAAAAAACGCAGATGATAACAACACTCAAATGGGTGTCAGTTTGTCTTATGCTTCTTTCCCCAACAAATTACTCCTCAAGTTCTTTTGAATTTGTTATGTTTCTCTAGTTGTTTTAAAGTAGGTTAGCAATTTTGCGGAAGTGCTGCTTTTATTCTATCTTCTTGATTCTTTTGTGCTGTTCTTAGATTTGAAGATGTAAAATAAAATGAATCAAGTCGAAATCATTACGTTGATTTTTATAATTAATGGTTTTTTATCTTTTTACTTCGCTAAATGATATTCGGTATTCCTCTTAATAATATATGCAAGTTTAAACTTTTATCATCTGTTTCAAAACATCTTTTGGATCACTTTGAATCGTTTCTGATTTTTGGTAGCTGATTTGAATTATATCATTTCCAGTGAATCTTAAATAGTTTGGAGTGAGAAGAGAATGACAAAGAAGCGAGAAGTAGAAGATGGCGTGGTGCCTGCGGAGTCGACTGCAAAACGGCAGAAGGTAATGGATCAGTCGTCTCCCTCTCTTCCACCAGTTGCTTTTGAGAATCCACTTCTTCCACTTGCATCTTATGATGATGATGAAGACGACGAGGATGATGGTACGAAAGGACACATTCCTGAGCAAGTTATAAATAATGGTGGAGACAAGGAGCAAAATGGCTACTCATCTGACGATAAAGAAGATGAGGATGATGGTAGAAGCCAAGGGAAGCGAAATCGTGCAATTGAGATTAGGAGGGACTGCCCCTATCTTGATACTGTGAACAGACAGGTAACATTATGATTCAATTTTTCTGAAACAGTTTTATCTATTATAATTCATCCTGCAACCACAGATATCTATACTGGAATCTTATATCTAATTGTGGAATTCTGAAATTTATATTGCATAGCGTAATTGTGACAGCTTTTCATCCTAGTGGTACTGAAGTTCCGAGATGCTTCTCCATTTTTTGTTTTGGTTTTAAAAACTTGCCTTCTGTTTATTAAAGTGTCAGTAGCTTGATACTTTTGTGACTTGTGTTTTAAGTGTTTGATGAAATTCCTAATAAAGAAAGCGCCTTATGGCTTATAGTAATTGAATATCAAACTAAATTTTGTTACACTTCATGCATTTCTACTGATGTCATAAGTAAACTATTTTGTTTTCGCTCACGTACTTAGACTGATGGTTCCCTCTCTCTCTCATTTATTTTTTTCTTGTCTGGTATATCCCCTTTAATACATATTATCTACATTTGCAGGTATTGGATTTTGACTTCGAGAAATTTTGTTCGGTCTCTCTTACAAATTTAAATGTGTATGCATGTTTAGTCTGTGGGAAATATTTTCAAGGAAGGGGACCAAAATCTCATGCGTATACACACAGTCTTGAAGCAGGACACCACGTGTTCATCAATTTACGAACAGAGAAAGTTTATTGTCTTCCTGATGGATATGAAGTCATAGATCCATCGCTTGATGACATTATTCATGTGCTGAATCCAAGGTTTGTCAAGATCACTTTTCAGTTGCTATCACTTAATTTTTGCTTTGTATTTTTATATTTATAGTGCACCTGTATCGATAAGCTGGGATCCTTCTTGTACTATATGACTGCGATTCACTCTTTTTGTTTGTTTTGTCCTTATTTGACAGATTTGCTCAAGAACAGGTTAAGCAACTCGATAAGAGCCGACAGTGGTCTAGGGCACTTGATGGGTCTGATTATCTTCCTGGAACGGTACTGCACTTCTTTATGTCATATTTATTTGTTAAAGCTACTATATTCCCTTTAGTCTAAATACTAATCTTTTAGTGCTGGGGTATATTTTAGGTTGGGCTGAATAACATCAAGGAGACTGATTTTGTCAATGTCACGATTCAGTCATTGATGCGAGTAACTCCCTTGAGAAACTTCTTTCTTATCCCTGAGAATTATCAACACAATAGATCTCCTCTTGTTCATAGATTTGGAGAGCTTACCCGAAAGATTTGGCACGCAAGGAACTTTAAAGGACAGGTGCATGTTAGCAATGCTTAATTCATTGTTTGTCTGTTCTTCATGGTTTTCTTATTTTGACCAAGTGTTGTTGCAGGTCAGTCCGCATGAGTTCTTGCAAGCGGTTATGAAAGCTAGTAAAAAACGTTTTCGGATAGGTGCCCAGTCTGACCCTGTTGAATTTATGTCATGGCTCCTGAATACCCTTCACACGGAGCTTAGAAGTTCCAAAAAAGGCAGTAGCATAATCCATCGGTGCTTTCAGGTTTGCTGCAAAAAGATAACTGTCTTCTACATTTAAAAATATCCTAGTTGAGCATTAATTTGTTAACATATGATGCTTTTTTCTCATAGGGGGAATTGGAGGTTGTGAAAGAGATGCATAATAGATCTATTGCTGAAAAGAGGGAGAATGGGGAGGATGGTGAACATGAATCTCACAATACTGGCATGGAAACTAGCAGAATGCCTTTTATAATGCTTGGACTTGATTTGCCACCACCTCCTCTTTTTACAGATGTCATGGAAAAGAATATTATTCCCCAGGTTCTTTTTTAAATTCAATTTTTTATTTGTGATTATCATTGGAAAGGTTTTGCCTTTTTTTCCCTAGTCGACAGTTTGTGGTGAGCGATGGTCATCGTATTGGAATTTTCCCATGTTGAATGTGTCATTGTACTAACTTTTGTACACATGCTGAAATACAAGTGTCTACATGTCAGCTAAGAAAAGGTGAGAGCGAGTTGTTCCTTGAGGAAAAAGTTGCACCTCTAGTTCTATACAAATGGTTACCTTTCTCAAAAGAAAAAAATTGCACCTAGTCTGAGACATAGTTTGCACTTGACTGTTCTTCACCAAGTTCATTTATCGAGTGTTATAGAGTTCAATTAGATTGTTGAGTTATCTGAGGCGAATGAAATCACTTAGATGTGCCAAAGTTTTGGTTTAATTGCTGGGAGTGTCTTTTCTAGCTGGTTAAAACTCTACTTCCTCTTTAAGTTTTATATAAAGAAAACAACCTCTCTTCTGATCAGATATTTCATTCACTTGATATTAGTTATGAAACAGTTTAGAATAATATCTGCAAGGGAAACTGTTTTACAAGTGTTACGTGGACAACAAATTTATCTTCTTGCAATAAATCTTGGCAATTACTCAAATGAAAGGAAGGCTCTTGAAACTATAGCCGTGTTATCCCGTTCCTATTCAAGAGTAATCACAGGAAATTAATGAACCTATCTCATTTTGATATTCATAGTATTGAAGTCTTTGGTCTACTGACTAGTTATTCATTAGTTAAATATTGTAACTAAATAAACTTATCCGAAGTGACTGAGAACTAAAAGAGCAAAGAGAAATAAAATGTAAGTTTTTGAAGACCATGACCTCATACATCAGGTGTAATGAGGAATATAACTTACTTAGAAATAATAAATAACATGGCAGTCTGGATGTTGGCCTTGTGTGTTGGGGAAGGGAGGACATACCACAGGAAATGTAAGTTTGAGAGCAAAAATTAAAGAGAAAGACAGTTAAGTGTATGGAAAGAAGAAAAATTAAAGGAAGAAGAATCTCTCCTTCTCAACCCCAAATTTAATGCCCTTCAGTTGTCTTTGACATTCTTTGAATTGGAGGTGAGATACTGAGATCTCTTGAATTTTAATTAACTTGATTTGGAGGAATACGTTTGTTAGTGATACAGTTCAATATTGCTGTACAGATGCCTATTTAGACACATTCATGATCTATTTGTGCTCTCTTTTGCCTCATTCTTTTCTTTCATCTTATAACCTCGGGGAAGTAGGGAAGATGCTACTCATCGAGCTTTGTGTTCAATGTGTTGAACTGGTTCTCGAAACTTATTGAGTCACCTGCTTTTGAACTGTCTAATATTTAGTCTCTGTGTTATGACATCCTTATCTGCATCCTTTTTATATATGATGCATCACAAGTTTATACTTGATTTTTGTAAATGCAGGTTCCATTATTCAACATACTAAAGAAATTTGATGGTGATACTGTGACTGAAGTTGTAAGGCCCCGTATAGCAAGGATGGGATACCGTGTGACAAAATTGCCAAAGTATCTAATTCTCCACATGCGTAGGTTTACAAAGAACAATTTCTTTATGGAGAAAAATCCTACACTTGGTGAGTACTTATTATTGATAATATACCTTGAATTGAATGAAATTGCTTAGACATTTAATTCATAATGTATGTAGACGCCTTGTAAGTTCCAACTGTATCACTAATATGCCCTCGCTCAATGGATGTAAAAGCCTCTTCAATACTCCTTCTAGCTCCGCTAATTCCCCCAACCTAGCTCATACCATCAAATTCTCATCCCTCAAATTTTTATCCTTATTTTTGGTTGGACATGATATCTAGCTGTTTTGTACAGTCTGGTTTCTGCTGCTCATTTAGCATATGCTAGAACTTATTGTAAATTAGAATGTCATTTAGCCTCTTCTACACTTGAATATCAGTAAACCTTTTTTGAGGGGTGGGTAGTGGGGAGCACCAAGGGGTTTGAAGTTCTAGTTTTGTTAATTTGAACTTTTTTATTTCTTGTTAGAATTGTTCTTTCTGATTCCAAAACCTCCACATGTGGGCACATTTAAGAATGGAGTGGAGAGCCGGGTGATGAGGGGTTCAGTTTTCCAGGCTTACTTCCCTGATGGGGCTGGATGTGTAATTTTTTCTTCCTGATGAAGATATTTTCTAAATCTATTTGTTAGAGGTGTCCCACTTCCACTTCGTTCTCCACACAAGACAGCTAGGTAGAGCAGGGAAAGGGCTGTGTGGAGGAGGAAAGAAACAAAACTAGCTATAACAGAAAAGGTTTTTAACCTTGAGTATTTGCAGTAGACTTAGGAACTGCATTGTTAGGCTTCTATCCCGTGATTTGTGAAGTTTCATGGGTCTTTTTTCAGTGAACTTCCCGGTGAAGAATCTAGAGCTCAAGGATTATATTCCCCTGCCAGCACCAAAGGAGAATGAGAAACTTCGCTCAAAATATGATTTGATTGCTAATATTGTTCATGATGGAAAGCCAGGCGAAGGCTCATACAGAGTGTTTGTCCAACGAAAATCAGAAGAACTTTGGTTAGTTACACAGCTCATATCACTAAGTTTTATGTGTTTCTAATATGAACTCTTACCACACACCAGACCAACACAAAAAAAAAAAGAAGGAAAAAAGGGTAATAGTTTGTTCTGTTAACTTGGTAACCTAATGCTTTAAACTGATGCAGGTATGAGATGCAAGACCTACATGTTTCTGAAACTCTTCCCCAGATGGTTGCGCTTTCTGAGACTTATATGCAGATATATGAGCAGCATCAGCAGTAATGAACCTCACAAGTAACATCAGAAACATCAACCTCTGCCTCTCCTCTTCTTTTTGAAATGCCAATTTCGACTTTTAGATATCTAATGAAGAGTATTCTACTCGTTGAGGGATAGTGATCTTTGCGATTTATTTTTCCTTTGTTGTATGTAAATCCTGCTGTTTTTGTGTTGCTTATGCTTAAGATTACTATTACATGGGGAATTATGAGAACTCTAGCTTTGGATTTATCCACTTGCTATTTTTTCTTCCATTTGTAGGAATATATATCTTCTTATGAATTCCAACTGAAATTTTAGTAAATTAAGATTGGAGTTAGATTTTAACTTCTTCAG</genome_strand>
        <mrna_strand>AATTG-ATCGGCTCTTTGCTTCTTCTTCTTCTTCTTCTCGAGCTTTCTGCAAAAATTGTATCCAGAACGTTAATTTTCCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAATCTTAAATAGTTTGGAGTGAGAAGAGAATGACAAAGAAGCGAGAAGTAGAAGATGGCGTGGTGCCTGCGGAGTCGACTGCAAAACGGCAGAAGGTAATGGATCAGTCGTCTCCCTCTCTTCCACCAGTTGCTTTTGAGAATCCACTTCTTCCACTTGCATCTTATGATGATGATGAAGACGACGAGGATGATGGTACGAAAGGACACATTCCTGAGCAAGTTATAAATAATGGTGGAGACAAGGAGCAAAATGGCTACTCATCTGACGATAAAGAAGATGAGGATGATGGTAGAAGCCAAGGGAAGCGAAATCGTGCAATTGAGATTAGGAGGGACTGCCCCTATCTTGATACTGTGAACAGACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGGATTTTGACTTCGAGAAATTTTGTTCGGTCTCTCTTACAAATTTAAATGTGTATGCATGTTTAGTCTGTGGGAAATATTTTCAAGGAAGGGGACCAAAATCTCATGCGTATACACACAGTCTTGAAGCAGGACACCACGTGTTCATCAATTTACGAACAGAGAAAGTTTATTGTCTTCCTGATGGATATGAAGTCATAGATCCATCGCTTGATGACATTATTCATGTGCTGAATCCAAG.....................................................................................................................................................ATTTGCTCAAGAACAGGTTAAGCAACTCGATAAGAGCCGACAGTGGTCTAGGGCACTTGATGGGTCTGATTATCTTCCTGGAACG.............................................................................................GTTGGGCTGAATAACATCAAGGAGACTGATTTTGTCAATGTCACGATTCAGTCATTGATGCGAGTAACTCCCTTGAGAAACTTCTTTCTTATCCCTGAGAATTATCAACACAATAGATCTCCTCTTGTTCATAGATTTGGAGAGCTTACCCGAAAGATTTGGCACGCAAGGAACTTTAAAGGACAG............................................................................GTCAGTCCGCATGAGTTCTTGCAAGCGGTTATGAAAGCTAGTAAAAAACGTTTTCGGATAGGTGCCCAGTCTGACCCTGTTGAATTTATGTCATGGCTCCTGAATACCCTTCACACGGAGCTTAGAAGTTCCAAAAAAGGCAGTAGCATAATCCATCGGTGCTTTCAG.........................................................................................GGGGAATTGGAGGTTGTGAAAGAGATGCATAATAGATCTATTGCTGAAAAGAGGGAGAATGGGGAGGATGGTGAACATGAATCTCACAATACTGGCATGGAAACTAGCAGAATGCCTTTTATAATGCTTGGACTTGATTTGCCACCACCTCCTCTTTTTACAGATGTCATGGAAAAGAATATTATTCCCCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCATTATTCAACATACTAAAGAAATTTGATGGTGATACTGTGACTGAAGTTGTAAGGCCCCGTATAGCAAGGATGAGATACCGTGTGACAAAATTGCCAAAGTATCTAATTCTCCACATGCGTAGGTTTACAAAGAACAATTTCTTTATGGAGAAAAATCCTACACTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACTTCCCGGTGAAGAATCTAGAGCTCAAGGATTATATTCCCCTGCCAGCACCAAAGGAGAATGAGAAACTTCGCTCAAAATATGATTTGATTGCTAATATTGTTCATGATGGAAAGCCAGGCGAAGGCTCATACAGAGTGTTTGTCCAACGAAAATCAGAAGAACTTTG.....................................................................................................................................................GTATGAGATGCAAGACCTACATGTTTCTGAAACTCTTCCCCAGATGGTTGCGCTTTCTGAGACTTATATGCAGATATATGAGCAGCATCAGCAGTAATGAACCTCACAAGTAACATCAGAAACATCAACCTCTGCCTCTCCTCTTCTTTTTGAAATGCCAATTTCGACTTTTAGATATCTAATGAAGAGTATTCTACTCGTTGAGGGATAGTGATCTTTGCGATTTATTTTTCCTTTGTTGTATGTAAATCCTGCTGTTTTTGTGTTGCTTATGCTTAAGATTACTATTACATGGGGAATTATGAGAACTCTAGCTTTGGATTTATCCACTTGCTATTTTTTCTTCCATTTGTAGGAATATATATCTTCTTATGAATTCCAACTGAAATTTTAGTAAATTAAGATTGGAGTTAGATTTTAACTTCTTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U587386" ref_strand="+" ref_description="SGN-U587386 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147862940|emb|CAN83206.1| (e_value=7e-17) hypothetical; (*ATH) AT4G22285.1 (e_value=6e-17) |; ">
      <seq>cttgaagcacgacaccacgtgttcatcaatttacgaacagagaaagtgtattgtcttcctgatggatatgaagtcatagatccatcgctggatgacattattcatgtgctgaatccaagatttgatcatgaacagggttagcgactcgataagaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0024K05.1" temp_strand="+" temp_description="C02SLe0024K05.1  AC226514.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0024K05 sequenced_by:kribb upload_account_name:korea">
        <position start="48029" stop="48761"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="48329" g_stop="48447" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48448" i_stop="48596" i_length="149">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48597" g_stop="48634" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="157" r_length="38" r_score="0.842"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0024K05.1" gen_strand="+" ref_id="SGN-U587386" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>157</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0024K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U587386" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="48329" e_stop="48447"/>
          <exon e_start="48597" e_stop="48634"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGAAGCAGGACACCACGTGTTCATCAATTTACGAACAGAGAAAGTTTATTGTCTTCCTGATGGATATGAAGTCATAGATCCATCGCTTGATGACATTATTCATGTGCTGAATCCAAGGTTTGTCAAGATCACTTTTCAGTTGCTATCACTTAATTTTTGCTTTGTATTTTTATATTTATAGTGCACCTGTATCGATAAGCTGGGATCCTTCTTGTACTATATGACTGCGATTCACTCTTTTTGTTTGTTTTGTCCTTATTTGACAGATTTGCTCAAGAACAGGTTAAGCAACTCGATAAGAGCC</genome_strand>
        <mrna_strand>CTTGAAGCACGACACCACGTGTTCATCAATTTACGAACAGAGAAAGTGTATTGTCTTCCTGATGGATATGAAGTCATAGATCCATCGCTGGATGACATTATTCATGTGCTGAATCCAAG.....................................................................................................................................................ATTTGATCATGAACAGGGTTAGCGACTCGATAAGAACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U587387" ref_strand="+" ref_description="SGN-U587387 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147862940|emb|CAN83206.1| (e_value=8e-16) hypothetical; (*ATH) AT4G22350.1 (e_value=1e-11)  Symbol: None | ubiquitin carboxyl-terminal hydrolase family protein, similar to U4/U6.U5 tri-snRNP-associated 65 kDa protein (Homo sapiens) GI:13926071; contains Pfam profile PF00443: Ubiquitin carboxyl-terminal hydrolase | chr4:11803846-11807190 RE... ; ">
      <seq>gggaattggaggttgtgaaagagatgcataatagatctattgctgaaaagagggagaatggggaggatggtgaacatgaatctcacaatactggcatggaaactagcagaatgccttttataatgcttggacttgatttgccaccacctcctctttttacagatgtcatggaaaagaatattattccccaggttcttttttaaattcaattttttatttgtgattatcattggaaaggttttgcctttttttccctagtcgacagtttgtggtgagcgatggtcatcgtattggaattttcccatgttgaatgtgtcattgtactaacttttgtacacatgctgaaatacaagtgtctacatgtcagctaagaaaaggtgagagcgagttgttccttgaggaaaaagttgcacctctagttctatacaaatggttacctttctcaaaagaaaaaaattgcacctagtctgagacatagtttgcacttgactgttcttcaccaagttcatttatcgagtgttatagagttcaattagattgttgagttatctgaggcgaatgaaatcacttagatgtgccaaagttttggtttaattac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0024K05.1" temp_strand="+" temp_description="C02SLe0024K05.1  AC226514.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0024K05 sequenced_by:kribb upload_account_name:korea">
        <position start="48995" stop="50192"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49295" g_stop="49892" g_length="598"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="598" r_length="598" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0024K05.1" gen_strand="+" ref_id="SGN-U587387" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0024K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U587387" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49295" e_stop="49892"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAATTGGAGGTTGTGAAAGAGATGCATAATAGATCTATTGCTGAAAAGAGGGAGAATGGGGAGGATGGTGAACATGAATCTCACAATACTGGCATGGAAACTAGCAGAATGCCTTTTATAATGCTTGGACTTGATTTGCCACCACCTCCTCTTTTTACAGATGTCATGGAAAAGAATATTATTCCCCAGGTTCTTTTTTAAATTCAATTTTTTATTTGTGATTATCATTGGAAAGGTTTTGCCTTTTTTTCCCTAGTCGACAGTTTGTGGTGAGCGATGGTCATCGTATTGGAATTTTCCCATGTTGAATGTGTCATTGTACTAACTTTTGTACACATGCTGAAATACAAGTGTCTACATGTCAGCTAAGAAAAGGTGAGAGCGAGTTGTTCCTTGAGGAAAAAGTTGCACCTCTAGTTCTATACAAATGGTTACCTTTCTCAAAAGAAAAAAATTGCACCTAGTCTGAGACATAGTTTGCACTTGACTGTTCTTCACCAAGTTCATTTATCGAGTGTTATAGAGTTCAATTAGATTGTTGAGTTATCTGAGGCGAATGAAATCACTTAGATGTGCCAAAGTTTTGGTTTAATTGC</genome_strand>
        <mrna_strand>GGGAATTGGAGGTTGTGAAAGAGATGCATAATAGATCTATTGCTGAAAAGAGGGAGAATGGGGAGGATGGTGAACATGAATCTCACAATACTGGCATGGAAACTAGCAGAATGCCTTTTATAATGCTTGGACTTGATTTGCCACCACCTCCTCTTTTTACAGATGTCATGGAAAAGAATATTATTCCCCAGGTTCTTTTTTAAATTCAATTTTTTATTTGTGATTATCATTGGAAAGGTTTTGCCTTTTTTTCCCTAGTCGACAGTTTGTGGTGAGCGATGGTCATCGTATTGGAATTTTCCCATGTTGAATGTGTCATTGTACTAACTTTTGTACACATGCTGAAATACAAGTGTCTACATGTCAGCTAAGAAAAGGTGAGAGCGAGTTGTTCCTTGAGGAAAAAGTTGCACCTCTAGTTCTATACAAATGGTTACCTTTCTCAAAAGAAAAAAATTGCACCTAGTCTGAGACATAGTTTGCACTTGACTGTTCTTCACCAAGTTCATTTATCGAGTGTTATAGAGTTCAATTAGATTGTTGAGTTATCTGAGGCGAATGAAATCACTTAGATGTGCCAAAGTTTTGGTTTAATTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U571892" ref_strand="+" ref_description="SGN-U571892 Tomato 200607#2 [5 ESTs aligned] ">
      <seq>ctgcaggatttttcacgagatttagagaatgaataataacactatcccatattcacctactcatgatatacaatactattatcaacaagattttgcacttgaaaataatccacatgagtatttttctgattccaccatcataaccacaaatactcaaaacatgactatcgatcatcaccaccaccatcatcatcagttttcttcacgaatttctgaaaacgatgatatacacgagttaacaagccctaaaaccaccacgatgaaaccaattcgaaggagatctagatcatccaagaaaacacctacaacgcttgtaaacgctagcatcacgaattttcgagcactagtgcaacaacatactggatgtcacacttgtccaacgttcaaaaataatcaaaagggtccaattaacctaagttttggtccacaaaatgatcaaagtgaattgcttggaagtaattcaataggagagggctctatgaattatggttactattataataataatcatgaagatcaagatgagaaatattcaaaggataatttacaacaagaaaaacaagagagtggttataatagtgttaattatgaaaatagtaagttaagtgtagatgattatggaaggtagttgcctaattagaatcttgaaaaagaatattctttttttttctaagtacaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0024K05.1" temp_strand="+" temp_description="C02SLe0024K05.1  AC226514.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0024K05 sequenced_by:kribb upload_account_name:korea">
        <position start="56033" stop="57296"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56316" g_stop="56996" g_length="681"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="682" r_length="682" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0024K05.1" gen_strand="+" ref_id="SGN-U571892" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0024K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U571892" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56316" e_stop="56996"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCATGCAACCCAAATAAATTTAAACCATGAATAATAACACTATCCCATATTCACCTACTCATGATATACAATACTATTATCAACAAGATTTTGCACTTGAAAATAATCCACATGAGTATTTTTCTGATTCCACCATCATAACCACAAATACTCAAAACATGACTATCGATCATCACCACCACCATCATCATCAGTTTTCTTCACGAATTTCTGAAAACGATGATATACACGAGTTAACAAGCCCTAAAACCACCACGATGAAACCAATTCGAAGGAGATCTAGATCATCCAAGAAAACACCTACAACGCTTGTAAACGCTAGCATCACGAATTTTCGAGCACTAGTGCAACAACATACTGGATGTCACACTTGTCCAACGTTCAAAAATAATCAAAAGGGTCCAATTAACCTAAGTTTTGGTCCACAAAATGATCAAAGTGAATTGCTTGGAAGTAATTCAATAGGAGAGGGCTCTATGAATTATGGTTACTATTATAATAATAATCATGAAGATCAAGATGAGAAATATTCAAAGGATAATTTACAACAAGAAAAACAAGAGAGTGGTTATAATAGTGTTAATTATGAAAATAGTAAGTTAAGTGTAGATGATTATGGATGGTAGTTGCCTAATTAGAATGTTGAAAAGGAATATTC-TTTTTTTTCTAAGTACAAGAA</genome_strand>
        <mrna_strand>CTGCAGGATTTTTCACGAGATTTAGAGAATGAATAATAACACTATCCCATATTCACCTACTCATGATATACAATACTATTATCAACAAGATTTTGCACTTGAAAATAATCCACATGAGTATTTTTCTGATTCCACCATCATAACCACAAATACTCAAAACATGACTATCGATCATCACCACCACCATCATCATCAGTTTTCTTCACGAATTTCTGAAAACGATGATATACACGAGTTAACAAGCCCTAAAACCACCACGATGAAACCAATTCGAAGGAGATCTAGATCATCCAAGAAAACACCTACAACGCTTGTAAACGCTAGCATCACGAATTTTCGAGCACTAGTGCAACAACATACTGGATGTCACACTTGTCCAACGTTCAAAAATAATCAAAAGGGTCCAATTAACCTAAGTTTTGGTCCACAAAATGATCAAAGTGAATTGCTTGGAAGTAATTCAATAGGAGAGGGCTCTATGAATTATGGTTACTATTATAATAATAATCATGAAGATCAAGATGAGAAATATTCAAAGGATAATTTACAACAAGAAAAACAAGAGAGTGGTTATAATAGTGTTAATTATGAAAATAGTAAGTTAAGTGTAGATGATTATGGAAGGTAGTTGCCTAATTAGAATCTTGAAAAAGAATATTCTTTTTTTTTCTAAGTACAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U584714" ref_strand="+" ref_description="SGN-U584714 Tomato 200607#2 [31 ESTs aligned] (*GB) gi|195627436|gb|ACG35548.1| (e_value=3e-60) vacuolar; (*ATH) AT4G02620.1 (e_value=2e-57)  Symbol: None | vacuolar ATPase subunit F family protein, contains weak similarity to vacuolar ATP synthase subunit F (EC 3.6.3.14) (V-ATPase F subunit) (Vacuolar proton pump F subunit) (V-ATPase 14 kDa subunit) (Swiss-Prot:P50408) (Rattus norvegicus... ; (*SWP) sp|Q9ZQX4|VATF_ARATH (e_value=1e-56) Probable vacuolar proton pump subunit F OS=Arabidopsis thaliana GN=VATF; ">
      <seq>acngccggggagcgaacagcaaatagccaaatatcatcagttttttttctttcttgtttcttcgattcgtctctgtcgaccgattggatccctcagagctaaaaacttcgaaaagccttgctttcttagatggctaaccgagctcctgtcagaactaacaactcagccctcattgccatgatcgctgatgaggacacaattactggatttttactggctggagttggcaatgttgatttgaggaggaaaacaaattaccttattgtggattcaaaaacaacagtgaagcagattgaagatgcttttaaggaattcaccacaagagaggacatcgcaatagtgttgatcagccaatatgtggccaacatgataagatttttggttgatagttacaacaaaccaattccagccattttggagattccttcaaaggaccatccatatgatcctgcccatgattctgttctatcacgagtgaagtatctcttctctactgaatcagtagctggcgataggcgttaatgttggagtaatgtttctatgccccaactatttcataattatcttgatattgtatcatgtccccactctatcaagagatgattcattttgtaatctgttttagatatttaagcggtttgtgttgttctcgactgttgattttcaagttgtataagttaaaagtgactgtgaatgaacaacttgttgcaaataagtcagttgctctgttctttgggaggttcaattgatattatgaatgattattcttgaagaggaaacaaataaactatttgaggactgcatcaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0024K05.1" temp_strand="-" temp_description="C02SLe0024K05.1  AC226514.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0024K05 sequenced_by:kribb upload_account_name:korea">
        <position start="74471" stop="36271"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74181" g_stop="74070" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74069" i_stop="73728" i_length="342">
            <donor d_prob="0.867" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="73727" g_stop="73648" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="192" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="73647" i_stop="72773" i_length="875">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72772" g_stop="72691" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="274" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="72690" i_stop="70323" i_length="2368">
            <donor d_prob="0.869" d_score="1.00"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="70322" g_stop="70240" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="357" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="70239" i_stop="69050" i_length="1190">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="69049" g_stop="68601" g_length="449"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="806" r_length="449" r_score="0.998"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="68600" i_stop="67949" i_length="652">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.826" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="67948" g_stop="67944" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="807" r_stop="811" r_length="5" r_score="0.600"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="67943" i_stop="66988" i_length="956">
            <donor d_prob="0.355" d_score="0.00"/>
            <acceptor a_prob="0.275" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="66987" g_stop="66972" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="812" r_stop="827" r_length="16" r_score="0.812"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0024K05.1" gen_strand="-" ref_id="SGN-U584714" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>827</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0024K05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584714" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74181" e_stop="74070"/>
          <exon e_start="73727" e_stop="73648"/>
          <exon e_start="72772" e_stop="72691"/>
          <exon e_start="70322" e_stop="70240"/>
          <exon e_start="69049" e_stop="68601"/>
          <exon e_start="67948" e_stop="67944"/>
          <exon e_start="66987" e_stop="66972"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTACTCATCAGCGAACAGCAAATAGCCAAATATCATCAGTTTTTTTTCTTTCTTGTTTCTTCGATTCGTCTCTGTCGACCGATTGGATCCCTCAGAGCTAAAAACTTCGAAGTAAGCTTGAAAAAATTGTTGCAACTACAACTTCCGAAGCTTTTTTTTTTCATTCAATTCTGTTATTTCAAAGGATTTCGATCTGATTTATTCGATTATTGTTTAAGAACTTAAAATTCAGGAAAATCCTTACTGGGTTTTCATCAAACTTTGGAACTAGATATGGGTTTTGAAAATTTTCAAGGTTTTGAATATTTAAGCTATGTTAAATCTGATTTCTTTTTCTGCTGGTGGTTTGTTAATAGTTTAAGATTTGATTTGATATCTGAATCTGTCAATGTGTTCAAGATTCTTAATTTCTGAATCATGGATATTTTTATTATAGTTTATCTGTTGTTGCAGAAGCCTTGCTTTCTTAGATGGCTAACCGAGCTCCTGTCAGAACTAACAACTCAGCCCTCATTGCCATGATCGCTGATGAGGTGAAATTTTCAGCATTTTTGTTCTTTGGGTGTTGCTATGTATGCTTAGAATTGATAGTCTATGCTCTATTTGTATTGTATCAGACGATTCGTAATGGGATCGAACCAGGTTTTTCTTTGTTTTCACTATTTAGAGAGGACATGTACTTCGGTGCTGGAATCATTCACGTGTATGGATTTTCCAAGGAAACAGGTTCTGGGGTATCTAAGTCACATATAGTCAAGTAAACTATTCTAGCCTGGGAGTTACTCACTGTGCTATATATAAGGTGAGAAGTGAAAAATTGATGGACACACAAAACAGGAGTGTGATGACTGTAAAATGATGAAAGCTAATTAAGACTAAATAAATCATGACATCTCTCTTCCTGAAATAGAAACATTGATAGCTTATCATTGCGGATGAGCTGTTGGTTGTTATTTCTCTAGTGTGTCTCTCTCTAGATGCTTTGGGGTCATCAGTCATCTTTGAGCATAGATATTATACTCTTATCTGTCACATATTTGATAACCTTATTTGTCTTGCACGAACTAATTAGAAGACGTTTGGACGAGTTATTATAATTGATGTGAGTTTACAGTTGATGTGACTGATGGAGCACTGGTTTTAGTTGGGACGTAATCATGTATATGTTTTGCATCATATGTACGATCAGAAATCTGTGGAAACGGGATAGCAATTATATATCTCATCTATTGTTTGATTACGTTTTGGTATGCAACTTTTTAAATTGGTATACTAATTATCCAGTGTTCTTTGAATCTACCCACTTACTTTCATGGGACTTTTATGATGAATATCTTGTTAGTCTACATACACGTGGTAGATGATATATAGACATACTGATGCTGATGAAAATAACTTGTTTGTATAGGACACAATTACTGGATTTTTACTGGCTGGAGTTGGCAATGTTGATTTGAGGAGGAAAACAAATTACCTTATTGTGGATTCAAGTAAGTTCCAATTTTGGAATTACCAGTTCTCCAGTATTTTGAGGATCTTTCATTTACTTTCTGCTGTAGTTTATACTCTCCACCAAAATAGAATGGTTAGTTATTTTCCAAATTAATAAATTCTCTTCCAAATGGCTAGTTTCTTTTACCAATGTGGGCAAAGGAGCTTGAAATTTGGGGGAGGGAGTTTAGATGTTAAGTTTTTTTTTTGGCTACATATTGGAACAACCTCTCTACCTTCAAAAGGTAGGTATAAGACTGCATACATGCCATCCTCCCAGATCTCACTTGTGGAATTACACTAGTATGTTGTTGTTGCAATTTTTGCTGCTACATCTGGTTCACTAGCTTCCTGTTTAGATGTCCCACATTGGGAAAGGGATGGGAAGTTGGTCCCCATATATGGACTTGGACAATCCTCACCTATAAGCTAGTTTTTGGGGTTGAGTTAGGCCCACGATCCATCTTTACATGGTATCATAGTCAAGCCTATCCTGATTCTTTGCTCACTAATGTTCGCCCCCATAATATATTGTCCACGCCCCAGTTAACATGATCTGGGCATTCGGGGGAGTGTTAAGACGTCCCACATCAAAAAAGGGATGGGCAGTTGGTCTTTTTTTATGGACTTGAATAATCCTCACCGTATAAGCTAGCTTTTGCGGTTGAGTTAGGCCCAAAATACATCTTTACACTTCCTATTGATAGGAATAATTAGATACAAGTGATGTGAAACTTAGAGGATTGTGCAAAATATTGGATAAATAGAGAGGGTGATGAAGGCAATCTGTTTAGTTGCATAGTAAAACGAAGTTCTCAAGCTAAAAAGGGAGTTTCTGATATCAGTGTCCAAGATGAGGACTGGAGTAGCGAGTACCTTAATATCCTGTGCCTTCCAAGGTAGAAACAAGAGAATGCTTCAGTGGATAAAGATCCATATGGCATATCCTTATGTATTTTTAAGAAGAAGAAGTAAATTAGTCAACCAATGGCAGTACATTGAGTGTTGGGTATTTTCATGGAGATGTCAGCCACCGACAGTGTTAAATTCAGAAGTTCAGGGATTGCAATTATAGGCTATAGCTGTAGTCTCTGTTCCAAAAGTTATCAGATATCAGAAATTATTGGTCATGCTCAGTTCCTTAAAGTTGTTTCACCATTTCTCTCATCCCTTTTCATGATAAGCCATGCCCCTTTGGTTGTGGAGGATAAAATATTTTCCCTTTTTCTTTTTTTCATTTTGTAGATAGCTTTTATCATCTCTGCATAGTTACATTTTTTAATTTCACTTGGTTAGTGTAGTTTTATTTCATTATATGATATTGCCATATTGGGGAAATAGTTAGTCTTATTATCCCCATTTTACCTTTAATGACATAACTTGTTGGACCTAATTTCATATAAAAGTTCACCTTTTCATTAAACAATTTCAATCAACTCTTCTCACCACAGAAGAGCAATTAATGACTATTTATTCTGGAACAAACGGCTATCTTGATTCATTAGAAGTTGGACAAGGAAATTTCTTGTTGAGCTATGCACTACTGGCATGCTGCATCACTGTGGGGCGCAGACCAAGGTATTATTTAAGGACGCCATAAGAAATGCACTTTGTGAAATACTCGAAGAGAAAGCAATGCATATTAGCACCCAAGGGTGTGGCCTAGTGGTTAATAGAGTGGTTGAGAACCATGAAGTCTAAGGTCAAATCCCAGCAGAGACAAAAACATGAGGTTTTTCTCGCTATTTGTCCTAGCTTTGGTGGACCGAGTACTTGGTACCAGTTGCTGGCGAGAGGTGGCAGGTATCCCATGGAATAAGCCGAGGTGCACACAAGCTGGTCCTGGACACTATGATTATCCAATAAAAGACAGTGCATATGTAGGAATCATTTTTTTAATAAGATAATAGATTTCATGGAACACATCAAAGAAGATGCAAAATATACAGAGCATAGACAAGTAAAAGACATTGTTAGCTCTATTACAAAAGGCTAATCTAAAGTAAAGTAGCTAACAAAGTTTAAAAAACCTCAGGGAATTGACAGCTGAGAAATTACTCCAGCTGCAGAAACTTCCATGGCCAATTAACTAACACTCCACAGGCATATGGTACATGCTTTTATTTTGCTAACTCTCTCATCTAAACTAATATAGGAGACTCTGAATAGAGTCAATCAACATTTATAACCAAACCGGTTGACCTTTTATTGGTAATGAATTCAAAAAGTACTTCTAATTTAGTTGTTGAGTGAAGGATGGTTTATAGGGAGCTGGCATTTCCTGTGAGTGGTAGAGCTTTTCATCTTTATCTCAAAGTTTCAAATTGTGGAAAGAAATTAACATAGATTCCCTATCCTCATGTTCAGAAACAACAGTGAAGCAGATTGAAGATGCTTTTAAGGAATTCACCACAAGAGAGGACATCGCAATAGTGTTGATCAGCCAATATGTAAGTTTTCTAATTTTCTCATTTGTTGTTTGGTTTATCAATTTTTTACATGTATTATGTAGTCAGGAATATTATCTGTAATTACATGTAGCTCTGCTCAAACGCCAAAATAAAATTTGTTTGTGTCAGCTGTTAATTATGTCGTATACAGTGTTTAAATGTTTATTGATCGAAATCTTTCATTGTTTTTTTTGAACTAAGTATTATCTGGCCAAGCTTCAGTTGCTCGCAAGTCATCAGAAACCTGCTAGAGTTAAAAAGAGTAATGTGATCTGTATTTCCTGTTGGAAGTTAATATCATAGTGGCTACGGCATCAATCTGCTTGCATTTCCTCTTCCAGAAAACAAGTTCCATAGGAATTGTAAAAACAAAAATAGATAATAATTGACTATAGCCATATAAAGCCTGCCTGTCGAATCACTATCACCCCCATCAGGTGAAAGTGGTTTGCATAAAGGTGGGGGGGAGGGCACATCTAAGACGTTTTCCTAAGGGTCATTTTGCTTGTTTGGTTATGAAATACAAGTGACGAGGTGTGTTCTCCATGTCAGTTTTTTAGGCAGTCTGAAATTCGTTAAAATGAGGAGATAATTGTTCATGCAATTTTCCAAACAAGATAAAGAAACGATATAAAAGTGATTTGACCAGATTAAGAAAACCTTGCAGTCACTCAAAACAGAGATTTGAAGATATCCAGTTTAGTTTAGTACTCCTTTGGTTGGTTTAGTGTATAAAGGGAAAGGTCACTAGTTTTGCTAAAAATTAGAAAAACAGTCTAATCCCCCACCCCCACCCCCACCCCCCAAATCTCCCGGTCGAATCAAACTTAGCTAAACCCAGTTTAGTAACTACATGAGCGTAGCACTTACTGTTTCTTATCTGTCATTAGAAGTATTATTGTTTTTAGATAAATTAAAAATTGTGGGTTGCAGTCAAAATGCATCTTTTACTTTTGTTGTACTCCAGTTCAATTTCAATCTACTAAGTAAAATCGAACTAACACTGTGTAATATGGTGGAGGAGTTTCGTATCTATCTACAGCAAGAACTTTAAATTATTAGGCTGCAGTTTATGTCTGTGGGGAATTAGTGCCCTCCATTTTCTTTAATTGAAGACTGACGAAAAATAAGGGTCTAAAGAAGAGTTAATTGACATTTAACTCAATTTATTCTTGGTTTATCCTTTTCAGGTGGCCAACATGATAAGATTTTTGGTTGATAGTTACAACAAACCAATTCCAGCCATTTTGGAGATTCCTTCAAAGGACCATCCATATGATCCTGCCCATGATTCTGTTCTATCACGAGTGAAGTATCTCTTCTCTACTGAATCAGTAGCTGGCGATAGGCGTTAATGTTGGAGTAATGTTTCTATGCCCCAACTATTTCATAATTATCTTGATATTGTATCATGTCCCCACTCTATCAAGAGATGATTCATTTTGTAATCTGTTTTAGATATTTAAGCGGTTTGTGTTGTTCTCGACTGTTGATTTTCAAGTTGTATAAGTTAAAAGTGACTGTGAATGAACAACTTGTTGCAAATAAGTCAGTTGCTCTGTTCTTTGGGAGGTTCAATTGATATTATGAATGATTATTCTTGAAGAGGAATCAAATAAACTATTTGAGGACTGCATCAATTTTCTGCTCTTTGATCTCTCACTGTGCTTATGGAAAATTTCTTGTTAGCCAAAGAATGTTCTCAACTCTGTGCTTCTGAAAGTGACCATTTGTTACTTCGTGCTCAAAAGTGACAACGTTTTCTTTTGCGGAGACATGATTTGAACTCGTGACCTTAAGGTTATGAGCCTAGCGAGCTACCAAACTGCTCTACCCGAATTTGTAACCTCTATAAGCAGATCCATTTTCTATGTTTTTCCTGATTAAACTAGAAGTGAAATGGGTGCACAAGGATATTGTGTTTCGCTTATATACAATCATAAAATTGAAAGACTGAGTTCTACGTCTGAAACTTCAACCACAATTATTCCTTAGTATTTCGTTGCTACAACTTCTATTTAGTTCCTTCCGTGTTTACTCACTTCACTCTCTCGTTCAGTATTATTAGTTCTTTAAGATAACAGATTCTCTTATTTTTACAGGAAAATAAGTTATTTTGAACTCATGTTGACTCCTGAATTAGCAATTTGGCCCTTCTATTACTTTACAGTCAAATCTGAGTCTAAACAAAACAGGTTTTTGAGACATAAAATGGTTTTGTGGATATTTTATTTTCTACTAAAATCATGTATACATGTGTAAAAGAACTTTTACTTTTTCAAATAATAAAGATGAAGCAAGGTCAGGAACGATGAATCTCTTTATGATAAACAAATTCATTTTGTAAGTTCGTTATTACATGTAGTTCCTACAAAGGATCGGACTAATGACATACAAAATATGAGTTCTCATTCTTTAGAGATTACAACTGTAATAAAAACATCTATCGACAAGGCACAAGATATGATCACAATTTTATAATAATGACATCAATTAAGATAACATTAAATATATACATGATATCAAATAGAAGAAAAGAAAAGAAAAAATCTATTTTTAAAAAAATAATAATTGAGGTGTTGAACCTCAACCAAATCACTCCATTTCTTTTCTTCTTCCAAAAAGACACTAAATTAAAAGATAACCATCATGATCCCAAATACTTTCAGTAATCAACTGATCATCTCCAGTAAAATCACTTAAACACAAATTCTCCAACTCAAAATCACCTATATCCATCGTTGTACTATTACTAGAATTCGTCGTTGACGATGAACCAAATGTTTTATTTTCATTTACTGATACAAACACACCTCCCTTCTCCTTTTGAGTATCATTGCAATTGTAACAATCATATCCAAATGAAGATACATGAGTTATTGTGTTATCTTCTTCAAAATCATCACTATTCTCATCTAATCCAAAATTTAAGTTTATTGGACCTTTATGAGCTCCCAAAAAAGTATTAGCAGTATGACATCCTGTAAATTGTTGTACTAGAGCTCGAAAATTCGATGCATCTGCATTGAGATGAGTCGTTGGAGTTTTCTTTGATGCTCGAGATCTTCTTCGAATTGGTGACTTTTTTATGCTACCATTTTTAGGACTCAACTCATGACTACACAAAGAGTTTGTAGTAGTAGTAGTAGTAGTGTCACAGTTTAAAGTTGATGATTTTGTTATTTGAGGGATACAAGAGTTTTGCATGGTTTTTGTTTTTGTTTTATAATTATGAATACTTGTGTTGTGAAGAAATGAAAAAAAACAA</genome_strand>
        <mrna_strand>ACNGCCGGGGAGCGAACAGCAAATAGCCAAATATCATCAGTTTTTTTTCTTTCTTGTTTCTTCGATTCGTCTCTGTCGACCGATTGGATCCCTCAGAGCTAAAAACTTCGAA......................................................................................................................................................................................................................................................................................................................................................AAGCCTTGCTTTCTTAGATGGCTAACCGAGCTCCTGTCAGAACTAACAACTCAGCCCTCATTGCCATGATCGCTGATGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACAATTACTGGATTTTTACTGGCTGGAGTTGGCAATGTTGATTTGAGGAGGAAAACAAATTACCTTATTGTGGATTCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACAACAGTGAAGCAGATTGAAGATGCTTTTAAGGAATTCACCACAAGAGAGGACATCGCAATAGTGTTGATCAGCCAATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCCAACATGATAAGATTTTTGGTTGATAGTTACAACAAACCAATTCCAGCCATTTTGGAGATTCCTTCAAAGGACCATCCATATGATCCTGCCCATGATTCTGTTCTATCACGAGTGAAGTATCTCTTCTCTACTGAATCAGTAGCTGGCGATAGGCGTTAATGTTGGAGTAATGTTTCTATGCCCCAACTATTTCATAATTATCTTGATATTGTATCATGTCCCCACTCTATCAAGAGATGATTCATTTTGTAATCTGTTTTAGATATTTAAGCGGTTTGTGTTGTTCTCGACTGTTGATTTTCAAGTTGTATAAGTTAAAAGTGACTGTGAATGAACAACTTGTTGCAAATAAGTCAGTTGCTCTGTTCTTTGGGAGGTTCAATTGATATTATGAATGATTATTCTTGAAGAGGAAACAAATAAACTATTTGAGGACTGCATCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U578693" ref_strand="+" ref_description="SGN-U578693 Tomato 200607#2 [10 ESTs aligned] ">
      <seq>cctctagtgcgataacccgggctgcaggaatttcgcacgagcataattataaaacaaaaacaaaaaccatgcaaaactcttgtatccctcaaataacaaaatcatcaactttaaactgtgacactactactactactactacaaactctttgtgtagtcatgagttgagtcctaaaaatggtagcataaaaaagtcaccaattcgaagaagatctcgagcatcaaagaaaactccaacgactcatctcaatgcagatgcatcgaattttcgagctctagtacaacaatttacaggatgtcatactgctaatacttttttgggagctcataaaggtccaataaacttaaattttggattagatgagaatagtgatgattttgaagaagataacacaataactcatgtatcttcatttggatatgattgttacaattgcaatgatactcaaaaggagaagggaggtgtgtttgtatcagtaaatgaaaataaaacatttggttcatcgtcaacgacgaattctagtaatagtacaacgatggatataggtgattttgagttggagaatttgtgtttaagtgattttactggagatgatcagttgattactgaaagtatttgggatcatgatggttatcttttaatttagtgtctttttggaagaagaaaagaaatggagtgatttggttgaggttcaacacctcaattattatttttttaaaaatagattttttcttttcttttcttctatttgatatcatgtatatatttaatgttatcttaattgatgtcattattataaaattgtgatcatatcttgtgccttgtcgatagatgtttttattacagttgtaatctctaaagaatgagaactcatattttgtatgtcattagtccgatcctttgtaggaactacatgcaataacgaacttacaaaatgaatttgtttatcataaagagattcatcgttcctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0024K05.1" temp_strand="+" temp_description="C02SLe0024K05.1  AC226514.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0024K05 sequenced_by:kribb upload_account_name:korea">
        <position start="66706" stop="68236"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67006" g_stop="67936" g_length="931"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="972" r_length="931" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0024K05.1" gen_strand="+" ref_id="SGN-U578693" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>931</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0024K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U578693" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67006" e_stop="67936"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAATTATAAAACAAAAACAAAAACCATGCAAAACTCTTGTATCCCTCAAATAACAAAATCATCAACTTTAAACTGTGACACTACTACTACTACTACTACAAACTCTTTGTGTAGTCATGAGTTGAGTCCTAAAAATGGTAGCATAAAAAAGTCACCAATTCGAAGAAGATCTCGAGCATCAAAGAAAACTCCAACGACTCATCTCAATGCAGATGCATCGAATTTTCGAGCTCTAGTACAACAATTTACAGGATGTCATACTGCTAATACTTTTTTGGGAGCTCATAAAGGTCCAATAAACTTAAATTTTGGATTAGATGAGAATAGTGATGATTTTGAAGAAGATAACACAATAACTCATGTATCTTCATTTGGATATGATTGTTACAATTGCAATGATACTCAAAAGGAGAAGGGAGGTGTGTTTGTATCAGTAAATGAAAATAAAACATTTGGTTCATCGTCAACGACGAATTCTAGTAATAGTACAACGATGGATATAGGTGATTTTGAGTTGGAGAATTTGTGTTTAAGTGATTTTACTGGAGATGATCAGTTGATTACTGAAAGTATTTGGGATCATGATGGTTATCTTTTAATTTAGTGTCTTTTTGGAAGAAGAAAAGAAATGGAGTGATTTGGTTGAGGTTCAACACCTCAATTATTATTTTTTTAAAAATAGATTTTTTCTTTTCTTTTCTTCTATTTGATATCATGTATATATTTAATGTTATCTTAATTGATGTCATTATTATAAAATTGTGATCATATCTTGTGCCTTGTCGATAGATGTTTTTATTACAGTTGTAATCTCTAAAGAATGAGAACTCATATTTTGTATGTCATTAGTCCGATCCTTTGTAGGAACTACATGTAATAACGAACTTACAAAATGAATTTGTTTATCATAAAGAGATTCATCGTTCCTG</genome_strand>
        <mrna_strand>CATAATTATAAAACAAAAACAAAAACCATGCAAAACTCTTGTATCCCTCAAATAACAAAATCATCAACTTTAAACTGTGACACTACTACTACTACTACTACAAACTCTTTGTGTAGTCATGAGTTGAGTCCTAAAAATGGTAGCATAAAAAAGTCACCAATTCGAAGAAGATCTCGAGCATCAAAGAAAACTCCAACGACTCATCTCAATGCAGATGCATCGAATTTTCGAGCTCTAGTACAACAATTTACAGGATGTCATACTGCTAATACTTTTTTGGGAGCTCATAAAGGTCCAATAAACTTAAATTTTGGATTAGATGAGAATAGTGATGATTTTGAAGAAGATAACACAATAACTCATGTATCTTCATTTGGATATGATTGTTACAATTGCAATGATACTCAAAAGGAGAAGGGAGGTGTGTTTGTATCAGTAAATGAAAATAAAACATTTGGTTCATCGTCAACGACGAATTCTAGTAATAGTACAACGATGGATATAGGTGATTTTGAGTTGGAGAATTTGTGTTTAAGTGATTTTACTGGAGATGATCAGTTGATTACTGAAAGTATTTGGGATCATGATGGTTATCTTTTAATTTAGTGTCTTTTTGGAAGAAGAAAAGAAATGGAGTGATTTGGTTGAGGTTCAACACCTCAATTATTATTTTTTTAAAAATAGATTTTTTCTTTTCTTTTCTTCTATTTGATATCATGTATATATTTAATGTTATCTTAATTGATGTCATTATTATAAAATTGTGATCATATCTTGTGCCTTGTCGATAGATGTTTTTATTACAGTTGTAATCTCTAAAGAATGAGAACTCATATTTTGTATGTCATTAGTCCGATCCTTTGTAGGAACTACATGCAATAACGAACTTACAAAATGAATTTGTTTATCATAAAGAGATTCATCGTTCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U573442" ref_strand="+" ref_description="SGN-U573442 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|157338594|emb|CAO41945.1| (e_value=3e-35) unnamed; (*ATH) AT4G20030.1 (e_value=1e-32)  Symbol: None | RNA recognition motif (RRM)-containing protein, low similarity to heterogeneous nuclear ribonucleoprotein G (Mus musculus) GI:5579009; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) | chr4:10... ; (*SWP) sp|Q54PB2|MRD1_DICDI (e_value=2e-13) Multiple RNA-binding domain-containing protein 1 OS=Dictyostelium discoideum GN=mrd1; ">
      <seq>atcggccgaattggaaaaccaccattcatttgttgattgatgatgttgatgtgcaaaggggtatggccaagcagctcatccgttgttctgttgcagacaccaaatggacacaaatccttcaaaacccaagctagcttttctagctaccctcttgccagcaaagttatggttagaaatctatcatactccactgatgaaagttgtctggagaaaatattttcaaattttggtcatgttgctgaagttaagattgtgaaggatgaagtgactaaaagatcaaagggatatgcttttattcagtacacttctcaagaaaatgccatgcttgctcttgatagcatggatcacaagtacatcaatggcagggttatatttgtggaacttgcaaagcctacaaagaaagactttggcagatacccgagaagttgtggaccacctgtggagagattaccatctgaaaatgaagttccagacctaaaagaaaactgctaaggtaatgtttacgctagtgttagagtggcaatcattgataggtgcatgacagttccacaagtcatcattcttgaaactactgtgatgcagctttggttcgacttgataaaacttctattgcgtaaaatttcactcttaggtcactcctacaggttacaggactagtttacttgttctgtcatcgcattctgtgttttgcatgtaaacttcacacacatatatattgtgtttgttctattaggcatggcgcgttgcatgtcagtccaggtcaattacttcatactagaagaggctaagtgtacttccggtcatctttcaaaatctgtacttagaatcatgtatattaaatcgcaagacttgtgctttctcaacttgatgtaactagtttgatggtcaggttctgctactgtatatgtatttttagcttttacgcggtgaaaatggactatcatgatgtactttangctgctgccaagggtctgaaagttgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0024K05.1" temp_strand="+" temp_description="C02SLe0024K05.1  AC226514.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0024K05 sequenced_by:kribb upload_account_name:korea">
        <position start="74533" stop="78826"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74838" g_stop="74997" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="175" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="74998" i_stop="77534" i_length="2537">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.017" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77535" g_stop="77603" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="244" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77604" i_stop="77705" i_length="102">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.902" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77706" g_stop="77812" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="351" r_length="107" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="77813" i_stop="77894" i_length="82">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.882" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="77895" g_stop="78526" g_length="632"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="983" r_length="632" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0024K05.1" gen_strand="+" ref_id="SGN-U573442" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>968</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0024K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U573442" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74838" e_stop="74997"/>
          <exon e_start="77535" e_stop="77603"/>
          <exon e_start="77706" e_stop="77812"/>
          <exon e_start="77895" e_stop="78526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACCACCATTCATTTGTTGATTGATGATGTTGATGTGCAAAGGGGTATGGCCAAGCAGCTCATCCGTTGTTCTGTTGCAGACACCAAATGGACACAAATCCTTCAAAACCCAAGCTAGCTTTTCTAGCTACCCTCTTGCCAGCAAAGTTATGGTTAGAAGTAAGCAATTTACTCCCTCTTCCTTATATTTAACATTTAATATCAACAACTGTACTTTATCCCAAATGATAGGAGATAATCTACATATTTGTTTTACTAGGTTAAGTTAACTGGATGAATTTTATTCAATATATGAGCTAACTTAACTTCAAAAACTAGTTAATGAAAAGACTTTAACAGGATGGACCTGACTCTCATATATGACACCTGTGTTTTTTTTTTTTTGGGTTTCCATGTTCGGTAGCCACATTGGAGCCCGACTAAATTCACACACATGTCTTTTTTTTTCTTTTTTTGGGTTTCCCATCCGGTGTCCGGCACCCACATTGGAGCCCGAGTAAATTCGGATTTGCGCCGGAAAGTCCCACGTTGGGGTAAAACGCTCCCTAACAAAGGCGACTCCGTACCCAAGGGGCTTGAACCCGAGACCTCTTGGTTAAGGATGAATGAGTACTTACCGCTCCACCACAACACTTGTTGGTGACACCTGTGTCTAACTCAACCCCAAAAGCTAGCTAACGAGAGGACTACTGCGATTGCTCAACTCTATATAACCATACCACCAGTTCATTCTCCGACAAATGTGAGACTCTAACCCACTCTAACATTTTACTCTCTGTTGGCCCAGATTTACTTCCCTGCACAATGTTGTTCCTACTGGAAAAAGAGAAGGTGCTTGTTAAACTAGAGAACACATCTGAAAGATGACATTAGCTTCGTACTGGTAGCTAGCATCAGATTGAAAGTTTACAGCTTGAATCAATAATACGGTGTCTACTATCTATGTGTAGTGTGGATGATAGTTTTTGAACTTGTCTTCGTTATATGTTTCATCCATGTCCTATAAAAGCTAAACTTTTAAGACTTTTTGAAGCTTGGATACAACATCTGTTGGTCATAGCTGAAAAACTCTATTGACTTTGTAGTATCTTTTCCAAGAAACGGTGGGCGGAACTTAAATCAAAGAGAGAATTAAGTTTGTTTAGGATCTCTATTGGTGGAATTTGTTGTCGTCTGGGTACTGCTTGACACTAGTAATGTACAACCCACATTGCTTGCTTGTTATTCTGATCAAATAGTGATGTAGTAACTAGTGATAAGCTATGTTGCTTGAACTCTTCAAAAATGTTGACAGCTGCGTGTCCGATTCTCCAAAAATAGTGTATTTTTGAAGAATCCGACACGGATGTTGCATCAAAAGCAAAGAGTTCCGGAAACTTAGGTGATAAGCCTCATAAAATTGTATGCTCCTTTATACATTATCTTGACTCTGCATTATTGTGATAATACTAACTAATAAACCTCTTAGGAGTTTATATTTATTTATTTTTTTGAAAATAGTAATGTTAGGAGTTTATATTTCTTTATGTCATATCTTGTCTCTGCATCCTGGTACTAGTAAAAACTAGACATTGCAACATTGTATATGTTGATTGGCCAGATGTATTTGGTAAGACCATCGATCTATCGTTGTAATGATTCAGGATTTTGAGGTTTTACTGCCTATGAAGTGGTGGCATTTTTCTGTTTCACATAGATGATAAAAGCTAGTGATGCTCTTCAATTATGGTGGTGGTAGAATGTTAATTTTTATCAGCTGCTTTAAACTTCATGATTTCAAGTCTACAATTATGCTGCTTCCTGTTGAAGAAGTTGCTCGAAGACGCTAGATCTAGACATTTACGTGGTTCAAACCGTGCTTCCGGCTGAATAGAATTCAGATGTTTGGTCCGAGTAGTTATGATATTTGATGAAAAGTAAACACTTCATGTTATTGGGTAATATCCCACTTCTTGAGCTTAAAGGGCATGAAATTAAAAAGGGGCTACAGGCTTGTAGTGATTCAGCTAGTCATTATTTCAAATATACAGCACCTGGCTATACTTCCCGCTATAGTTGGCAAAGAAGTAAAATAGTGATATTAGAAAGCAATTCCTATGTAAAATGCATTCTGACTAACCTTGACATTCCAAGGTAGTAAGAAGAGTACTGTTAACTGACTACTGAAAGCAGTCACTGGAGATTTTTGCTTGTAAAAAATCAGAAAAAAAACGAGGAAAAATAGAAGAACGAATGAGGTTATGTAGAAGGAGATAAGTATCTCCATGTAATGCTGTTACTTTCCCTTTAGGAACTATGTGTTCAGTATCATTTTAGCGAGAAAATGTTGACTTCTTGTATTGTAAACTTGAAGGTTTTCTATTTACTAATATACATATACTGGAAACTTACTTAGTGCTGCTCAATGAAGAGTCCAGAATTTTCCTCTTTGATGCCTCTAAATGATAGATTCCATATTTAACTAAGTTAAAATCCTTCCTTAAAGTATTAAGCTATCATTGCACTAATTATTGTTCTCCATTGACCAAATTGTAGATGTAATGAATGTCATGTTAAGATTTTTTTTCTCTTTAACCCTTATGCTACAAGTTCAGAATTCACTTTCTGTCTTAGATATATCGATCACATGCTTTTCATTCAACGGTTGTGGTTCTCTCCTAAAGTTCCAAAATTTGTGTCTTATTTTTGAACCATAGATCTATCATACTCCACTGATGAAAGTTGTCTGGAGAAAATATTTTCAAATTTTGGTCATGTTGCTGAAGGTATGTACCGTTGCTTGAAGATAATTTTTCTTATCTATTCTACTCTTTCTTGTAGTTGAGATTGTGACCTGTATTTTTTAATGTATCTACATCCCTTACCAGTTAAGATTGTGAAGGATGAAGTGACTAAGAGATCAAAGGGATATGCTTTTATTCAGTACACTTCTCAAGAAAATGCCATGCTTGCTCTTGATAGCATGGATCACAAGGTTATACTCTATAAATTTGTTTTGGATTTTTAATTCCCTTCACAGTATGTCTTCTTCGTCACGTTCTCTCTTCCCTTGTCAGTACATCAATGGCAGGGTTATATTTGTGGAACTTGCAAAGCCTACAAAGAAAGACTTTGGCAGATACCCGAGAAGTTGTGGACCACCTGTGGAGAGATTACCATCTGAAAATGAAGTTCCAGACCTAAAAGAAAACTGCTAAGGTAATGTTTACGCTAGTGTTAGAGTGGCAATCATTGATAGGTGCATGACAGTTCCACAAGTCATCATTCTTGAAACTACTGTGATGCAGCTTTGGTTCGACTTGATAAAACTTCTATTGCGTAAAATTTCACTCTTAGGTCACTCCTACAGGTTACAGGACTAGTTTACTTGTTCTGTCATCGCATTCTGTGTTTTGCATGTAAACTTCACACACATATATATTGTGTTTGTTCTATTAGGCATGGCGCGTTGCATGTCAGTCCAGGTCAATTACTTCATACTAGAAGAGGCTAAGTGTACTTCCGGTCATCTTTCAAAATCTGTACTTAGAATCATGTATATTAAATCGCAAGACTTGTGCTTTCTCAACTTGATGTAACTAGTTTGATGGTCAGGTTCTGCTACTGTATATGTATTTTTAGCTTTTACGCGGTGAAAATGGACTATCATGATGTACTTTAGGCTGCTGCCAAGGGTCTGGAAGTTGCC</genome_strand>
        <mrna_strand>AAACCACCATTCATTTGTTGATTGATGATGTTGATGTGCAAAGGGGTATGGCCAAGCAGCTCATCCGTTGTTCTGTTGCAGACACCAAATGGACACAAATCCTTCAAAACCCAAGCTAGCTTTTCTAGCTACCCTCTTGCCAGCAAAGTTATGGTTAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTATCATACTCCACTGATGAAAGTTGTCTGGAGAAAATATTTTCAAATTTTGGTCATGTTGCTGAAG......................................................................................................TTAAGATTGTGAAGGATGAAGTGACTAAAAGATCAAAGGGATATGCTTTTATTCAGTACACTTCTCAAGAAAATGCCATGCTTGCTCTTGATAGCATGGATCACAAG..................................................................................TACATCAATGGCAGGGTTATATTTGTGGAACTTGCAAAGCCTACAAAGAAAGACTTTGGCAGATACCCGAGAAGTTGTGGACCACCTGTGGAGAGATTACCATCTGAAAATGAAGTTCCAGACCTAAAAGAAAACTGCTAAGGTAATGTTTACGCTAGTGTTAGAGTGGCAATCATTGATAGGTGCATGACAGTTCCACAAGTCATCATTCTTGAAACTACTGTGATGCAGCTTTGGTTCGACTTGATAAAACTTCTATTGCGTAAAATTTCACTCTTAGGTCACTCCTACAGGTTACAGGACTAGTTTACTTGTTCTGTCATCGCATTCTGTGTTTTGCATGTAAACTTCACACACATATATATTGTGTTTGTTCTATTAGGCATGGCGCGTTGCATGTCAGTCCAGGTCAATTACTTCATACTAGAAGAGGCTAAGTGTACTTCCGGTCATCTTTCAAAATCTGTACTTAGAATCATGTATATTAAATCGCAAGACTTGTGCTTTCTCAACTTGATGTAACTAGTTTGATGGTCAGGTTCTGCTACTGTATATGTATTTTTAGCTTTTACGCGGTGAAAATGGACTATCATGATGTACTTTANGCTGCTGCCAAGGGTCTGAAAGTTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U586894" ref_strand="+" ref_description="SGN-U586894 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gagcatcagattgaaagtttacagcttgaatcaataatacggtgtctactatctatgtgtagtgtggatgatagtttttgaacttgtcttcgttatatgtttcatccatgtcctataaaagctaaacttttaagactttttgaagcttggatacaacatctgttggtcatagctgaaaaactctattgactttgtagtatcttttccaagaaacggtgggcggaacttaaatcaaagagagaattaagtttgtttaggatctctattggtggaatttgttgtcgtctgggtactgcttgacactagtaatgtacaacccacattgcttgcttgttattctgatcaaatagtgatgtagtaactagtgataagctatgttgcttgaactcttcaaaaatgttgacagctgcgtgtccgattctccaaaaatagtgtatttttgaagaatccgaccggatgttgcatcaaaagcaaagaattccggaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0024K05.1" temp_strand="+" temp_description="C02SLe0024K05.1  AC226514.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0024K05 sequenced_by:kribb upload_account_name:korea">
        <position start="75428" stop="76516"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75727" g_stop="76216" g_length="490"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="489" r_length="489" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0024K05.1" gen_strand="+" ref_id="SGN-U586894" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0024K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U586894" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75727" e_stop="76216"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCATCAGATTGAAAGTTTACAGCTTGAATCAATAATACGGTGTCTACTATCTATGTGTAGTGTGGATGATAGTTTTTGAACTTGTCTTCGTTATATGTTTCATCCATGTCCTATAAAAGCTAAACTTTTAAGACTTTTTGAAGCTTGGATACAACATCTGTTGGTCATAGCTGAAAAACTCTATTGACTTTGTAGTATCTTTTCCAAGAAACGGTGGGCGGAACTTAAATCAAAGAGAGAATTAAGTTTGTTTAGGATCTCTATTGGTGGAATTTGTTGTCGTCTGGGTACTGCTTGACACTAGTAATGTACAACCCACATTGCTTGCTTGTTATTCTGATCAAATAGTGATGTAGTAACTAGTGATAAGCTATGTTGCTTGAACTCTTCAAAAATGTTGACAGCTGCGTGTCCGATTCTCCAAAAATAGTGTATTTTTGAAGAATCCGACACGGATGTTGCATCAAAAGCAAAGAGTTCCGGAAACT</genome_strand>
        <mrna_strand>GAGCATCAGATTGAAAGTTTACAGCTTGAATCAATAATACGGTGTCTACTATCTATGTGTAGTGTGGATGATAGTTTTTGAACTTGTCTTCGTTATATGTTTCATCCATGTCCTATAAAAGCTAAACTTTTAAGACTTTTTGAAGCTTGGATACAACATCTGTTGGTCATAGCTGAAAAACTCTATTGACTTTGTAGTATCTTTTCCAAGAAACGGTGGGCGGAACTTAAATCAAAGAGAGAATTAAGTTTGTTTAGGATCTCTATTGGTGGAATTTGTTGTCGTCTGGGTACTGCTTGACACTAGTAATGTACAACCCACATTGCTTGCTTGTTATTCTGATCAAATAGTGATGTAGTAACTAGTGATAAGCTATGTTGCTTGAACTCTTCAAAAATGTTGACAGCTGCGTGTCCGATTCTCCAAAAATAGTGTATTTTTGAAGAATCCGAC-CGGATGTTGCATCAAAAGCAAAGAATTCCGGAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U568336" ref_strand="+" ref_description="SGN-U568336 Tomato 200607#2 [20 ESTs aligned] (*GB) gi|147777300|emb|CAN64609.1| (e_value=7e-106) hypothetical; (*ATH) AT2G32260.1 (e_value=2e-99)  Symbol: None | cholinephosphate cytidylyltransferase, putative / phosphorylcholine transferase, putative / CTP:phosphocholine cytidylyltransferase, putative, strong similarity to CTP:phosphocholine cytidylyltransferase (Brassica napus) GI:1418125; c... ; (*SWP) sp|Q9Y5K3|PCY1B_HUMAN (e_value=6e-62) Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B; ">
      <seq>ggggagaggagtgatgggtgtggggtggagaagaaacaaaagaggttaaatataagaagacttttttttttaaaaaaaaaattacaatttaagcgttacaattgtatttggagaagagagagagaagagagaagggcgataatactatagtaatggagaatggaggaggaggaggagaagatccacaattagaaccaccaccacagccgcagcgacggttgaagccgatcccaccgaatccaccgccaacagatcggccggctcgtatttacgccgacggaatctacgatctctttcacttcggacatgctcgcgccctcgaacaagctaagaaactattgcctaacgctcagcttcttgttggatgctgcaatgatgaaatcactcacaaattcaagggaaaaactgttatgaatgaaaaggagcgatatgaatctttgcgccactgcagatgggttgatgaagttattccagatgcgccttgggttgtaaccccagagttcattgagaaacatcggattgactatgtggcacatgacgctcttccttatgcggatgcaagtggagctggaaatgatgtttacgagtatgttaagtccattggtaagttcttggagaccaagcggactgatggaatatctacttcagatttaataatgaggattgtaaaagactacaatgaatatgtgatgcgcaatttggacagaggatattcaagaacggatcttggtctgagctacgtgaaggaaaaaaggctgagagtgaacaggggtttgaaaaagttgcatgagagagtaaagaaacaacaagagaaagtggaagagaagatacaaacagtagcaaagcatcgaaatatttgggtggagaatgctgatagattggttgctggtttccttgagatgtttgaagagggttgccacaaaatgggaactgtcataagagaccgaattcaagaacagatgaggaccaagagtataaaagggcttctatatgacaaagaagaggatgatgatgaatatgactactattacgggagcagtgacgatgatgaagaatactacgatggtgaagatgaagaatagggttgttcactttctcatgttatgtggtgatgtaaaatgtagtttatggatcaagttggatgaagatgtattatgtcctaacgtttggatgcgcgtgtgatatgcgtgttttattttggtagaatgtagtggcaattagttgtgttgtaaaccgtgatcaagcatagtcttgtaccataacgctgtcaatcagagtgatttgtcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0024K05.1" temp_strand="+" temp_description="C02SLe0024K05.1  AC226514.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0024K05 sequenced_by:kribb upload_account_name:korea">
        <position start="81909" stop="89577"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82208" g_stop="82544" g_length="337"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="337" r_length="337" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82545" i_stop="82905" i_length="361">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="82906" g_stop="83019" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="451" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83020" i_stop="84958" i_length="1939">
            <donor d_prob="0.913" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84959" g_stop="85054" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="547" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="85055" i_stop="85319" i_length="265">
            <donor d_prob="0.719" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="85320" g_stop="85362" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="548" r_stop="590" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="85363" i_stop="85656" i_length="294">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="85657" g_stop="85812" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="591" r_stop="746" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="85813" i_stop="86095" i_length="283">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="86096" g_stop="86176" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="747" r_stop="827" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="86177" i_stop="88666" i_length="2490">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.264" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="88667" g_stop="88765" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="828" r_stop="926" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="88766" i_stop="88915" i_length="150">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="88916" g_stop="89277" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="927" r_stop="1288" r_length="362" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0024K05.1" gen_strand="+" ref_id="SGN-U568336" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1288</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0024K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U568336" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82208" e_stop="82544"/>
          <exon e_start="82906" e_stop="83019"/>
          <exon e_start="84959" e_stop="85054"/>
          <exon e_start="85320" e_stop="85362"/>
          <exon e_start="85657" e_stop="85812"/>
          <exon e_start="86096" e_stop="86176"/>
          <exon e_start="88667" e_stop="88765"/>
          <exon e_start="88916" e_stop="89277"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCAGAGGAGTGATGGGTGTGGGGTGGAGAAGAAACAAAAGAGGTTAAATATAAGAAGACTTTTTTTTTTAAAAAAAAAATTACAATTTAAGCGTTACAATTGTATTTGGAGAAGAGAGAGAGAAGAGAGAAGGGCGATAATACTATAGTAATGGAGAATGGAGGAGGAGGAGGAGAAGATCCACAATTAGAACCACCACCACAGCCGCAGCGACGGTTGAAGCCGATCCCACCGAATCCACCGCCAACAGATCGGCCGGCTCGTATTTACGCCGACGGAATCTACGATCTCTTTCACTTCGGACATGCTCGCGCCCTCGAACAAGCTAAGAAACTGTATGTTTTCTCCTATTTTCATCCGTCGTAATACTCTATATATGATTTTTAGAATCATTAATTGACTTTTATTGTGAAAATTTCATGCCTTTTATATTCTCTATTGTGATGCTGGATTTCTGAGTGATTGTGAGAGGGATCCAATGAGATATCTGCTTGATTTCTTCTCACGTAGGTAAGCAAGACTAGGTGAGAAGACTTATGTGTCGGTGAAAGAAGAAAACCAAATAGGTGTTTGTCTAAGTTGTTGTTTTTTATTCTTATTGGAATATTATTAGTTGTATGATTGTAGAGGCATGAAGAATTTGTGAAATTGAACATACTTTTACTTTAGACTGAATTATTCATTGCCTAAATGTAGATTGCCTAACGCTCAGCTTCTTGTTGGATGCTGCAATGATGAAATCACTCACAAATTCAAGGGAAAAACTGTTATGAATGAAAAGGAGCGATATGAATCTTTGCGCCACTGCAGGTTGGTTTTATGGGGTTGTCAATTATGTTTTAAGTTTAATGTTTTTCCAGTCAGAGCATAATAAAATGATCTTTCTTCGTGAAATGATCTGAGTATATCTAATTGCCGGGGTTAGATTCATTCAGTTGTCTGATGTCTTCATAGTACATTTACAAATATATGAAGTTATGTTTTCATGTAGATGTTTCTTATATTGTGTTTATTGAGGGTAACTTTGATTTTTAAAATGATTGTAGTTGTTTGTTCGTTTTCCTTTCAGTTGTGAATGAGATGAATAGTTGAGGTAGTTATTTTGTATAAAAAATGGCTGTTGTTGTGACAAATAAGAGACACAAGGATGAGAGTAATATAGCATGTGTGAAGATCATCTTTTTATAAGATAATGAATTTCATAAGGCATCAAGAAGATGCAAAATTTACGGAAGGTAGAAAGTAAAAGACATTGTTAGCTATATTAAAAAGTAAAAGGGAGGCCATCGTGTTGGGATTACATTGCACACAAAATCATTAAATCTTTGGGGAATCACATCGATTCAAGATTCAACTTGGCTAGTTCAAACTCATATATTGATATATGTGTTGGAACCAGCCAAATTGAATCTCGAATGGATGTGATTCCCCAAAATTTTAATGATTTTGTGTGCAATGTAATCCCAAAACAATGGCCTCGCCTTCTGCTATGTAATATAGATAACAATTTAAATTGGGAAGTGTACCAACATTTAATTCTGGGAAGACAAATGGTTAGGGGGATCTACCCTAAAGAATGAATTTCCAAGCTTGTATCAGATAGCTCAGAACATAACTTTACCATCTCTCAGAATTGGCAAAATAACTGCTGGCAAATACAGTTCAGGAGGAATATTTAAGATTGGGAACTGCCTCACCTTATAGAGGTATGGCCTAAATTAGAACACTCTTGTCAAGTCATGTATTACTGACAACCTAAAATGGAAGGATGGTCCCTATTCAGTATCGGGAGGCTTTGCTCATCTATGCTCTCCTACAATGAGGTAATTGATAGATGGCTCTGGAAATTAAAGCTTCTCTCAAGATCATATGTTCTAGCTGGACAGCTTTACATGAAGCATGCCTTGCATAGGATAAACTCTACAGAAGGAAAATTCAGAGTCAGTAGATGCTTCATATGCCTAATCAAATTAGATCCCAATCGACTTCTCTTGCTTCACTTCACAATCATCACAGATATTTGGGGCATGTTTTTCTCTATTTTCGGTCTTAAAGCATAAAAGAGGCCTATGAACGCTGGTCTAAATCGAAAGTTGATTAGTCCATCGCAGATGATTCCTGCCTTATCTTTTGAGGACAGAAAAGAATTATAGATGTTTTTATGGGATTTCAACACCTACTTATTTTCTGAAGGTCTGTTATGGTTGTATAGTTTGCAGAATCTCTCCCCTGTAAATTGTCCTATTAATTTTTTGAACTTCATCAGCTCTTTAGCATTAGCTTAGGCTTTGTGGCCTATGGCTGATTATCTTTTGTGCTTCTGATCAATGTCAAACGGATTGGTAGAAGAAATGGTGAGAAAGACAGAGACAGAAAGGAACTCAAAATATTTTTGAAGACAAAAGCAGTTATATTTAGAAGATCAAGATGAATCGTCTTTCTTTGTGCTATTTTTGGTGTACGGGATCTTTTTGATCATATATGGGACTGGATAGATTTAATAGGTGGCTTGCAAGTGACTGTCACATCAGGCTTCCCTTTTTTTCTCTTTCTGAGTTGTACATACAGTTCTCAGCCCTTGCCAGGTGCTGACTTTAGTATCAGTACAAGCCTGTTACCTTCCTTTTGGAAAAAAAAATGCCGCTTATGATGGTTCTAATATTGTAGCTTCTAATGGTTGATATCTGCCTTTATCTTTAATTTGTATGGTGCATTTTCAAGTAGGTTAATTGTGTATGCATTGTTGCAGATGGGTTGATGAAGTTATTCCAGATGCGCCTTGGGTTGTAACCCCAGAGTTCATTGAGAAACATCGGATTGACTATGTGGCACATGACGCTCTTCCGTAAGGCAAAACGGCCCACAAAATTTTTACTTCTGTTGATTTGCATAAGCGTCCCTGTTTCCTTGGAACTATATTTGGACCAGCTTTTGATATGCCTTATCTGCTTATTCATTATTTTACTTTAAGATGGATTTAGCTTTACATAACTAATTTAAGGTCTTCCCCCGTTGTGTGATTTTGTTTTATTTGTTCGTATTGTTGTTTCATTCTGGGTTCCGAGATATTTTTTCTTTTAATTTTTCGTCTTCTTGTCTGTACACGTCAGTTATGCGGATGCAAGTGGAGCTGGAAATGATGTTTACGAGTATGTAAGTCCAAAATGAACTTCAGTTTATCATACGCGACTTTTACCTTGTTCATATGATGTTTCTGTTAAACAATTTAGTTTGTGTCTGTACAATGTTTTTGTGTGCATAAACCGGGGTGATTTGCAAATTGTTCATCTTTTTAATATGCTGTATGAAAGTCGGTCTTTATTTACTTATTTTGCTCATTGTTGATCCGTTTTAATCAGTGTAAGATATCTAGTTTGATATTCACTCTTTAATGCCTACTTTAATGCCATTGTGTAATGTGAATATTTTTAAAACCTGTGTTATTAGGTTAAGTCCATTGGTAAGTTCTTGGAGACCAAGCGGACTGATGGAATATCTACTTCAGATTTAATAATGAGGATTGTAAAAGACTACAATGAATATGTGATGCGCAATTTGGACAGAGGATATTCAAGAACGGATCTTGGTCTGAGCTACGTGAAGGTATACTCTTTAGTGTTTTGATTTGGTGATGTAGTAATACCTTACCTTTCTGAGGAAAGAATTGTTCTTGTTTTGCAAATGCAATGAAAAGAAAAAGGGTGCTAATTGAATTATGTAGACTTTCTGCTACGCGACAAAAAAAATAAATTATGTAGACTTTCTGCTAGCATTAGTTTTTTTATTCCTCACTAATAATAGTAGAATCAATGGCGCAGAGTCAAAGATTACATTTTCTTTCATTATTTGCTTTGCCAGGTATTAACTTCATCATTGCCTCTTTTAGGAAAAAAGGCTGAGAGTGAACAGGGGTTTGAAAAAGTTGCATGAGAGAGTAAAGAAACAACAAGAGAAAGTGGAAGAGAAGGTATATTCTTAAGTATTTGTCTGCTTTTCATTTCTCTATTTCGAATACAAACTTGTCAGAAGAGTCTCCAATCTCTATGGAATATGTGGTTTTTGAATAAAGTTTGGCAATTATCTGGAAAAAGCAAGGAAAAAGGATATTGAGATCTATGTCTTCTGTCATTTATGCAAATTATTTTTTTAAAAAGAAGGTAACCATATTTTATATAACCTAAAGAGTACATAGAGAAACATAGTTACAGGAACCCCCAAAAAAACATAAACCAATCACTTAACTAGTTACAATGACCCAATAATGTCAACTACATAATCTCTATATCTTCTGCTAGGCCTTCCTTACACCGAAAATTTGAAACAAAAATATATAAGAATATATTTTTAGTCTTCCGTTGAGTCGGCTACATCTTCAAAACACCACAGTCCACACGTTCCTTTTCTTTCCTATTGTCCACCAGATGCACATAGGAATAATTCTCCACCATCTCTTCTGCCTTACAAAATTGTCTGGACCATTCCAGCATGCTAGCAACTCAGCAGTTATCTTAATTATCCATTTGAGCCTTTCTATACTCAGTAAGAGCTGTACAGATTACAGGTAACTTACATGCTAGCAACTCAGCAGTTTTCTTAATTATCCATTTGAGCCTTTCCATACTCAGTAAGAGCTGTACAGATTACAGGTAACTTTGCAATGGATAAGTAGGTGGCTACTTGTTTCATTCATTATCCATCTGAACCCTTTCATACTCGGTAAGAGCTGCTTCAGAGTAGTGGTAACTTTGCAATGGATAAATAATAGATGGCTCTTTATTTCATTTTCTCTCCACATAGAAGGCATTTAGAACACATAGAAATATTGTGCAAATGACACTTTGAGCAATGAAGGGTAGCACGGGAAGCAATATGATGGTATATAAGGTAAGGTTGAATTCGAGGATACAATTGAATTGCCTCTCTACCTCACAAAGGTAGGCAGTAGGGGTAAGGTTTGCATAGACCCTACCCTATCCAGACCCCACTGGTGGGACTATACTGGTATATTGTTGTTGTTGTGGTGGTGAATATTATAAAGTGGAGGTGACTTGGTTTAACACATCCTACAATGGAATATCAACATTATATGTCAATGTTAGGTGTTCTAATCTTTTATCATCGCTGTGCAACTGACATGTTCTTGTAGGTTCTCGTATTATTAGATCCTTTATATTTAAAGCTGACAACATTTACATAAGGTCAAGTTTGTCCCCAAGGAGATGAATCATTTGTATTATGTCATGCATGCATAGGAACTTTTGGATACAAAACAATAGCTAACCACATTTTCATATCAGCTATATTAGCCTGGATCGATACTTGTGCATTTAGTTGCTATTTCTTATGAGTAGGGTGATGTCCAACCACTTTTAGAAGCATAAGTAGATATCTTTGCCGACCGAATTGTTTGTTTTAGTAGATGGATGGTTCTTTTGTTTAATTCAAATCTGGTGTGGTTTCATTTGTTGAGAAGCCTGGAGCTTTTAATTAGTATAAGTAATTTTCTCAGCCTATAATGAAGTGTTCATGAAATTTTGTGGTTTGCTTCCCCATTATGATGTGGCTCAGTTGATAGTAAACAAATGTATTTTTTTTAATAGGGATAGTTTATATCTTTATTTCTATCATTGAGCTTGCATCCGATTATGGTTAATGTTGTGTTGCAATGTGTACTACCTTCCGGGTAAATTTTCCTCTTACTATTCTACTAATTACTACTCCCTCTATGTGACACTCTTTCCTTTTTAGTTTGTCCAAAAAGAATGACATCTTCCCAAATTTAGTAAAATTTAACTTCAAACTTTCCATTTTATCCCTAGCGAAATGATTTATTGCCACGTAAATTTCTATAGGTTAAAATCTTCCTTTTAAAAAAAAATGAACTTGAAGCTTCCTTTTAGTCAAATGCCTTCACATAAATTGGAAGGAACTGCCAACGCAACCAAACCCCGTTCTTTTATATTATTTGTTGGAATAGATAGTAGATATATGATCGGATGCATAAGTTGGTAAGGGCTGTTTAGAGTTGGACATAAAATTACTAATTCAAATTGAAATGTACAATGATTGGGGAAATTGGAACGGGTGGAGTATTATTTCCGATTCGTTATAGTTTATCACCTTGTAGAATTTGGGTGGTGGAGATGGTGGGAGTCGCAATTATCTGGACTTTTGAAGAGTGAGCTGAAGTGCTAAACTATGTAGACGAAGCTACTTCTCATCTTATATGCTAGGTTTCTGAGTAAAGGAAGCTGTTTCTTCTCCATTGATTATTCTCACTATGTCTTTTGTACTCAGTGTTACCAAAAATAGAGCAGTATGTAGCAGTTCTGATAGCTTTTTCGTAATTTAATGAATTAAACATAAGACGGATGCTTGTCGTCATTGAAGAACCATCACTTTAAGCTATTTCTAGTCTTCTAGCACAAAACACGCTAAAAAAGAGTACCTGTTGCAGATACAAACAGTAGCAAAGCATCGAAATATTTGGGTGGAGAATGCTGATAGATTGGTTGCTGGTTTCCTTGAGATGTTTGAAGAGGGTTGCCACAAAATGGTAAGATCTCTGTGCTGCTTTTCCCATCCCTCTCTTTTCCTCTTCTCTTATCTGGTGTTCAATCCCCTAGGGTTTTCCAGTAGCACCTCCCACACACGAATGAGAGTGGTTTATATTTGCACTTCTGATGACACATTGAAATTTCAACAGGGAACTGTCATAAGAGACCGAATTCAAGAACAGATGAGGACCAAGAGTATAAAAGGGCTTCTATATGACAAAGAAGAGGATGATGATGAATATGACTACTATTACGGGAGCAGTGACGATGATGAAGAATACTACGATGGTGAAGATGAAGAATAGGGTTGTTCACTTTCTCATGTTATGTGGTGATGTAAAATGTAGTTTATGGATCAAGTTGGATGAAGATGTATTATGTCCTAACGTTTGGATGCGCGTGTGATATGCGTGTTTTATTTTGGTAGAATGTAGTGGCAATTAGTTGTGTTGTAAACCGTGATCAAGCATAGTCTTGTACCATAACGCTGTCAATCAGAGTGATTTGTCTA</genome_strand>
        <mrna_strand>GGGGAGAGGAGTGATGGGTGTGGGGTGGAGAAGAAACAAAAGAGGTTAAATATAAGAAGACTTTTTTTTTTAAAAAAAAAATTACAATTTAAGCGTTACAATTGTATTTGGAGAAGAGAGAGAGAAGAGAGAAGGGCGATAATACTATAGTAATGGAGAATGGAGGAGGAGGAGGAGAAGATCCACAATTAGAACCACCACCACAGCCGCAGCGACGGTTGAAGCCGATCCCACCGAATCCACCGCCAACAGATCGGCCGGCTCGTATTTACGCCGACGGAATCTACGATCTCTTTCACTTCGGACATGCTCGCGCCCTCGAACAAGCTAAGAAACT.........................................................................................................................................................................................................................................................................................................................................................................ATTGCCTAACGCTCAGCTTCTTGTTGGATGCTGCAATGATGAAATCACTCACAAATTCAAGGGAAAAACTGTTATGAATGAAAAGGAGCGATATGAATCTTTGCGCCACTGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGTTGATGAAGTTATTCCAGATGCGCCTTGGGTTGTAACCCCAGAGTTCATTGAGAAACATCGGATTGACTATGTGGCACATGACGCTCTTCC.........................................................................................................................................................................................................................................................................TTATGCGGATGCAAGTGGAGCTGGAAATGATGTTTACGAGTAT......................................................................................................................................................................................................................................................................................................GTTAAGTCCATTGGTAAGTTCTTGGAGACCAAGCGGACTGATGGAATATCTACTTCAGATTTAATAATGAGGATTGTAAAAGACTACAATGAATATGTGATGCGCAATTTGGACAGAGGATATTCAAGAACGGATCTTGGTCTGAGCTACGTGAAG...........................................................................................................................................................................................................................................................................................GAAAAAAGGCTGAGAGTGAACAGGGGTTTGAAAAAGTTGCATGAGAGAGTAAAGAAACAACAAGAGAAAGTGGAAGAGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAAACAGTAGCAAAGCATCGAAATATTTGGGTGGAGAATGCTGATAGATTGGTTGCTGGTTTCCTTGAGATGTTTGAAGAGGGTTGCCACAAAATG......................................................................................................................................................GGAACTGTCATAAGAGACCGAATTCAAGAACAGATGAGGACCAAGAGTATAAAAGGGCTTCTATATGACAAAGAAGAGGATGATGATGAATATGACTACTATTACGGGAGCAGTGACGATGATGAAGAATACTACGATGGTGAAGATGAAGAATAGGGTTGTTCACTTTCTCATGTTATGTGGTGATGTAAAATGTAGTTTATGGATCAAGTTGGATGAAGATGTATTATGTCCTAACGTTTGGATGCGCGTGTGATATGCGTGTTTTATTTTGGTAGAATGTAGTGGCAATTAGTTGTGTTGTAAACCGTGATCAAGCATAGTCTTGTACCATAACGCTGTCAATCAGAGTGATTTGTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U603534" ref_strand="+" ref_description="SGN-U603534 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gccttctgctatgtaatatagataacaatttaaattgggaagtgtaccaacatttaattctgggaagacaaatggttagggggatctaccctaaagaatgaatttccaagcttgtatcagatagctcagaacataactttaccatctctcaaaattggcaaaataactgctggcaaatacagttcaggaggaatatttaagattgggaactgcctcaccttatagaggtatggcctaaattanaacactcttgtcaagtcatgtattactgacaacctaaaatggaaggatggtccctattcagtatcgggaggctttgctcatctatgctctcctacaatgaggtaattgatanatggctctggaaattaaagcttctctcaagatcatatgttctagctggacagctttacatgaagcatgccttgcataggataaactctacagaaggaaaattcagagtcagtagatgcttcatatgcctaatcaaattagatcccaatcgacttctcttgcttcacttcacaatcatcacagatatttggggcatgtttttctctattttcggtcttaaagcataaaagaggcctatgaacgctggtctaaatcgaaagttgantantccatcgcagangattcctgncttatcttttgaggacagaaaanaantatagatgtttttatgggntttcnacacctacttattttctgaagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0024K05.1" temp_strand="+" temp_description="C02SLe0024K05.1  AC226514.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0024K05 sequenced_by:kribb upload_account_name:korea">
        <position start="83389" stop="84703"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83689" g_stop="84403" g_length="715"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="715" r_length="715" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0024K05.1" gen_strand="+" ref_id="SGN-U603534" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0024K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U603534" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83689" e_stop="84403"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTTCTGCTATGTAATATAGATAACAATTTAAATTGGGAAGTGTACCAACATTTAATTCTGGGAAGACAAATGGTTAGGGGGATCTACCCTAAAGAATGAATTTCCAAGCTTGTATCAGATAGCTCAGAACATAACTTTACCATCTCTCAGAATTGGCAAAATAACTGCTGGCAAATACAGTTCAGGAGGAATATTTAAGATTGGGAACTGCCTCACCTTATAGAGGTATGGCCTAAATTAGAACACTCTTGTCAAGTCATGTATTACTGACAACCTAAAATGGAAGGATGGTCCCTATTCAGTATCGGGAGGCTTTGCTCATCTATGCTCTCCTACAATGAGGTAATTGATAGATGGCTCTGGAAATTAAAGCTTCTCTCAAGATCATATGTTCTAGCTGGACAGCTTTACATGAAGCATGCCTTGCATAGGATAAACTCTACAGAAGGAAAATTCAGAGTCAGTAGATGCTTCATATGCCTAATCAAATTAGATCCCAATCGACTTCTCTTGCTTCACTTCACAATCATCACAGATATTTGGGGCATGTTTTTCTCTATTTTCGGTCTTAAAGCATAAAAGAGGCCTATGAACGCTGGTCTAAATCGAAAGTTGATTAGTCCATCGCAGATGATTCCTGCCTTATCTTTTGAGGACAGAAAAGAATTATAGATGTTTTTATGGGATTTCAACACCTACTTATTTTCTGAAGG</genome_strand>
        <mrna_strand>GCCTTCTGCTATGTAATATAGATAACAATTTAAATTGGGAAGTGTACCAACATTTAATTCTGGGAAGACAAATGGTTAGGGGGATCTACCCTAAAGAATGAATTTCCAAGCTTGTATCAGATAGCTCAGAACATAACTTTACCATCTCTCAAAATTGGCAAAATAACTGCTGGCAAATACAGTTCAGGAGGAATATTTAAGATTGGGAACTGCCTCACCTTATAGAGGTATGGCCTAAATTANAACACTCTTGTCAAGTCATGTATTACTGACAACCTAAAATGGAAGGATGGTCCCTATTCAGTATCGGGAGGCTTTGCTCATCTATGCTCTCCTACAATGAGGTAATTGATANATGGCTCTGGAAATTAAAGCTTCTCTCAAGATCATATGTTCTAGCTGGACAGCTTTACATGAAGCATGCCTTGCATAGGATAAACTCTACAGAAGGAAAATTCAGAGTCAGTAGATGCTTCATATGCCTAATCAAATTAGATCCCAATCGACTTCTCTTGCTTCACTTCACAATCATCACAGATATTTGGGGCATGTTTTTCTCTATTTTCGGTCTTAAAGCATAAAAGAGGCCTATGAACGCTGGTCTAAATCGAAAGTTGANTANTCCATCGCAGANGATTCCTGNCTTATCTTTTGAGGACAGAAAANAANTATAGATGTTTTTATGGGNTTTCNACACCTACTTATTTTCTGAAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U596906" ref_strand="+" ref_description="SGN-U596906 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>aaaacaaatcactcgtgattgacagcgttatggtacaaaactatgcttgatcacggtttacaacacaactaattgccactacattctaccaaaataaaacacccatatcacacccgcatccaaacgttaggacataaaacatcttcatccaacttgatccataaactacattttacatccccccataacaggaaaaagtgaacaaccctattcttcatcttcaccatcgtaatattcttcatcatcgtccctgcccccgtaaaagtaatcatattcatcatccccctcttctttggcaaaaaaaagcccttttaaacccttggccctcatctggtctggaattcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0024K05.1" temp_strand="-" temp_description="C02SLe0024K05.1  AC226514.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0024K05 sequenced_by:kribb upload_account_name:korea">
        <position start="89576" stop="88634"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89277" g_stop="88934" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="345" r_length="345" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0024K05.1" gen_strand="-" ref_id="SGN-U596906" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>344</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0024K05.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U596906" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89277" e_stop="88934"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGACAAATCACTC-TGATTGACAGCGTTATGGTACAAGACTATGCTTGATCACGGTTTACAACACAACTAATTGCCACTACATTCTACCAAAATAAAACACGCATATCACACGCGCATCCAAACGTTAGGACATAATACATCTTCATCCAACTTGATCCATAAACTACATTTTACATCACCACATAACATGAGAAAGTGAACAACCCTATTCTTCATCTTCACCATCGTAGTATTCTTCATCATCGTCACTGCTCCCGTAATAGTAGTCATATTCATCATCATCCTCTTCTTTGTCATATAGAAGCCCTTTTATACTCTTGGTCCTCATCTGTTCTTGAATTCG</genome_strand>
        <mrna_strand>AAAACAAATCACTCGTGATTGACAGCGTTATGGTACAAAACTATGCTTGATCACGGTTTACAACACAACTAATTGCCACTACATTCTACCAAAATAAAACACCCATATCACACCCGCATCCAAACGTTAGGACATAAAACATCTTCATCCAACTTGATCCATAAACTACATTTTACATCCCCCCATAACAGGAAAAAGTGAACAACCCTATTCTTCATCTTCACCATCGTAATATTCTTCATCATCGTCCCTGCCCCCGTAAAAGTAATCATATTCATCATCCCCCTCTTCTTTGGCAAAAAAAAGCCCTTTTAAACCCTTGGCCCTCATCTGGTCTGGAATTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U589113" ref_strand="+" ref_description="SGN-U589113 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157351276|emb|CAO41463.1| (e_value=3e-30) unnamed; (*ATH) AT2G40430.2 (e_value=1e-28) |; (*SWP) sp|O22892|GSR2_ARATH (e_value=1e-27) Uncharacterized protein At2g40430 OS=Arabidopsis thaliana GN=At2g40430; ">
      <seq>gcctatgtgtatttggagccctaattcctaaatcaaaactcacaggccacagcctccagctctctcttttttgttctctgaactctcagagacactgtgtcggcgaccagcaagcacagcggcgcagcaaaactctcgtctgtcgactctctatctctcagcgtgacggattattggtttggccctccctgtttgtgcagcagctgtcagagatccatatcccattctacgagagttttagcttgccaaatctcgacagatttattcttaacactgtccactaatctctttgacttagctacttgttcacttaggaatcaagagtagagagatggggaagaataagagctcaaggaaagggaagaaggcatggagagccaacataagtacggaggatattgaagatttctttgacaactccactaaagatgctctttcaggcggttctcttgctcaagttcccagtgactctctcttttatgtcgacaaatccagagatctttctgtcaaacggaaaattgaaaaacaccgggagaaagtacttcgatatgatagtatactacaaagcaatgcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0024K05.1" temp_strand="+" temp_description="C02SLe0024K05.1  AC226514.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0024K05 sequenced_by:kribb upload_account_name:korea">
        <position start="90078" stop="94670"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90377" g_stop="90548" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90549" i_stop="93152" i_length="2604">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93153" g_stop="93304" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="324" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93305" i_stop="93392" i_length="88">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.528" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93393" g_stop="93565" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="325" r_stop="497" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93566" i_stop="94292" i_length="727">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.706" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="94293" g_stop="94370" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="575" r_length="78" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0024K05.1" gen_strand="+" ref_id="SGN-U589113" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0024K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U589113" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90377" e_stop="90548"/>
          <exon e_start="93153" e_stop="93304"/>
          <exon e_start="93393" e_stop="93565"/>
          <exon e_start="94293" e_stop="94370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTATGTGTATTTGGAGCCCTAATTCCTAAATCAAAACTCACAGGCCACAGCCTCCAGCTCTCTCTTTTTTGTTCTCTGAACTCTCAGAGACACTGTGTCGGCGACCAGCAAGCACAGCGGCGCAGCAAAACTCTCGTCTGTCGACTCTCTATCTCTCAGCGTGACGGATTGTAAGCTACCTCATCTCCCATTAGTAATATTTAGTATGTATCTCTCGGTCTCTTTTCTCTGCCTACAGCAAAACAGCAAGCTAAATTTTAAGATATTTCTGTTGTTTTAAGTATTGAATTCTTGTGTTGAATGTTTTTGGGCTGGCTGCCTTGTTCCTGGTAATGTTATTTTATATTTGGATTGTGTTTCTGGCTTGCTGTTGCTGAAGTGTTTTGCCAAGTTAGAATTTTTTTTTTTGTGACTGCTAAGCAACTTGCTAATTGGCATGGCTGCTGCGGTGCTGGCAACTGGTTAGACTATTATGTGCAAGTGAGCCGTGCTGTACTGCTCCGAGCCTGCGAGTGGGCTGCCTGCTATGTTAGTTCACCTTGAAATAGACCAAATTTAGTTCATAGTTTAGCCTATTAAGTTAGTTCATTGTTATAAGAGCAGTGCTAACTTATTACTTAAGTATTGAATGTTGATACTTGACAACAGCGAAGAATGCTAGGCTGTTAGGCTGAGAAGAGTGTTATAAAAAAAGAGACATTACGAGACTAAGAGCCTTTATTTATTTGAATTTTCATGTTAACTTTATAAGTTAAATATTTTGATAATTTTGTTCTCATTTGCACCAAAAAACCATTTTAAAAACACTGAACCGAAGTTTGGTTCGGTATTTGGTACACACTATTTCAAATCTGAATACCGAAGAACCGAACCGGATTTGATACAAGAAAGCAAATAAAGAAAAAAAAAGTAAGACAGTTGAATCTTCTAGCCTTAAACTAAAGATTGAAACGGACTGTACTGTTCCTTTTTATTTTTAAGAGTACTTATTAATTATCTTATTATTGCTAAAAAATGGTTGGGGGCCTAAGGCAAGTTCTCTATTTTCCAATGCATACAGCTGCCCCTGATTGTAAATGTGCAATACATGCAGCTGTTACCAGGCTTTACTAGTCTATGTCTACATAGAGATGTCAATGTGAGTTTGGAACCATCAAAATGAAAAGGACTAAATCCTAGAGTTAGAATCTTATCTTCTTTACTGTTTTGATTCATTAGTCTTTATGCTTTGTGTTTTTCTTTATCAGATCTAAATGAGAAAAAGAAATGGTTAGCTTAATTACAATGTGAACTAGCTCTGGAGATCAGTAGCTAATAGCTAAGTGTGATGTATGTTCATTAGATGCCATATAGGATCAGTAGTCTATGAACTATGAAGAGGTCAGTAAGATGAGTGATCAGTCTTGTTAAGCTTAAGTCTATAATTTATTTGAACTCTATTATGTTTCTGTTAGCGGCAGCCCCTTCATGTGGATATATTGTGTTTGTATGTCGTGATTTCCTCTAGTCTAGATAGTAAAGGTTTAATAAATTTCTATCAACAAGTATTTGACTAATCAGGGATTTTTGAATTAAGGTTCTTGTTGTATTCTAGAACTTTTAGTTATCTTGCCACCTTAAAATTAGCACAAAATGGCTAAAGAATCTTGTGTTGGCCTTCTTGTTCTCATTCATAAACTTGAGATGAAGTCTTGTTGTATATGTTTTCAGCTATAAGGTTGCTGTCCAGGAGGAATATCTTTAGCTCACTTGTAAATAAAGGGAAACCCCTTCCAGTATTAGCAACATCATCTTGTGAGGGGTCTAATTGTATTATGTTCAAGACTATTTTTGTTGAGTCTCTTATTCATGAAGGGTCTAAAACTTGTGATTTTTAACTGAAATAAGTACTAAGAAATGATTTAAGGATAATCAAAAACTTGTAGATGGCCTGTTTCAGCTATGTGTTTGCAAGTCTAGTTTCAAACTTGTTTAGCTTTCCTTCATGTTTATGCTTGAGTAGTTGACTAGTTGATCTGTGACATAAGAGGCTTATCATATCCCGTTATGTGGTTGGGTAACATCTGTCTCTTTGTTTATTTAAGATCCCCTTTAACTTGAGAGGAGTTTTATTTTTGTTCAAGAAAAGATCAAGTTTGTTCAAAAATAATGCTCTCTGGTTGTGTTTGTATTTTTAAAAATGAGAAGATTTGGCATTTAAGAGAATTGTCACTGCTTACTTGAGATTAATGGTACCCCTTCCTAGTCTTGAATGGCTTAAGTATGTTGAAAACTCACTACATGAGCCCCTTTTAAAGTTCTGAACATAGCACCCTTCTTTGTTTTTTAAGTTGTGAGTAAGAAGTACTCCCTCTGTCACCAATTACTTGTCCACTTTTGAATTTGCACACCTATTAAGAAAACAATAATTGACATAGTGAGTTTACCATATTACCCCTATTAATTATGAAGTGGATGAATTGAAACTTAAGACATTCAAGAAGTTTTTACCTTTTACAAAGTAATTAATTGAGGGTATAATAGGTAAAAAAAAATTGGCCTTTCTTGATTTGTCAAAATGGACTAGTAATTAGGGATAGAGTGAGTAGCAGTTTCCTATGCAATTATTTTTTTGCGATTATTTTCTTCATTTTACTGTTCATAAACCCATGATTGTTCAGGGACTTTTTTGCTCTGTTCGATGTGCTTACCACTTCCTAAATCCTGAATAATTAACCTTAGGATCATTAGTTAAGACTAAATCCATTAAGACTTTAGTGGTAATAATTTTCCAGATTGGTTTGGCCCTCCCTGTTTGTGCAGCAGCTGTCAGAGATCCATATCCCATTCTACGAGAGTTTTAGCTTGCCAAATCTCGACAGATTTATTCTTAACACTGTCCACTAATCTCTTTGACTTAGCTACTTGTTCACTTAGGAATCAAGAGGTATAAATTCTCAAGTGACTGTTTTACATTTATGCTAAATCTGTTTTGGGACCATGTTTTCAATATGACTTTTACTGCACTTGTTAAGTAGAGAGATGGGGAAGAATAAGAGCTCAAGGAAAGGGAAGAAGGCATGGAGAGCCAACATAAGTACGGAGGATATTGAAGATTTCTTTGACAACTCCACTAAAGATGCTCTTTCAGGCGGTTCTCTTGCTCAAGTTCCCAGTGACTCTCTCTTTTATGTCGACAAATCCAGAGGTATTCTATTTTTCAGCATTTTTTTCCCGGTTGAAAATTTCCAGAAGTATCTTTTGTTCAAGTAAATAGCAAGGTAAAAAAAAGAACAAGCCGATTTTGATATCAGGCTGGTGTTCACGTATATGTTCTAGCAGCTGATATAGTCTTTAGATGGATGGTATGTATGTGATTTACTGTTCCAACAGATGTATTGAACTAACGTTGGTTGGATAACTGGTTTACTCCACATTTGAAAATGGTATTTTCTTTTAACAGTAGTTTTTTGGTACACGGGAAATAACTGAGTGCTCTGATAATCTTCTCCAGAATTTTGTTTTGGTAGAATCAGTCAAGAGTATTGTGTACTAAGACAAGTAGACCAAATAATTCGGTATCTCATAGAGTTGTAATTATGGAAAAAATTCAATCTTGAGAGCAGATTGAACTTTCATGTCTGTTTTAGACTTGCAGTAATTGTTAGGGTGTTGCTTTTCAGTCAATGGTTCGTGTTCCCATCCAATTGTTGGCTGTAATATGAAGCCGGATGAATTTTGGAGATAGTAACTGACATTTTTGGACTAGAAGAGGGCAGTTTAGAATCACCTTAAGTACTATGTCTCTGGACTATGTAGCAGTTGATGTTCATCATGGGTGCATCTTCCTTTTCCCTTTACTGCAGTTCTGTCGTTTTTTGTTGGTGAATCCTTCTTCAGTGATCAAATGACAAGTTTTTATGTCTACAATCCAGATCTTTCTGTCAAACGGAAAATTGAAAAACACCGGGAGAAAGTACTTCGATATGATAGTATACTACAAAGCAATGCCT</genome_strand>
        <mrna_strand>GCCTATGTGTATTTGGAGCCCTAATTCCTAAATCAAAACTCACAGGCCACAGCCTCCAGCTCTCTCTTTTTTGTTCTCTGAACTCTCAGAGACACTGTGTCGGCGACCAGCAAGCACAGCGGCGCAGCAAAACTCTCGTCTGTCGACTCTCTATCTCTCAGCGTGACGGATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTTTGGCCCTCCCTGTTTGTGCAGCAGCTGTCAGAGATCCATATCCCATTCTACGAGAGTTTTAGCTTGCCAAATCTCGACAGATTTATTCTTAACACTGTCCACTAATCTCTTTGACTTAGCTACTTGTTCACTTAGGAATCAAGAG........................................................................................TAGAGAGATGGGGAAGAATAAGAGCTCAAGGAAAGGGAAGAAGGCATGGAGAGCCAACATAAGTACGGAGGATATTGAAGATTTCTTTGACAACTCCACTAAAGATGCTCTTTCAGGCGGTTCTCTTGCTCAAGTTCCCAGTGACTCTCTCTTTTATGTCGACAAATCCAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTTCTGTCAAACGGAAAATTGAAAAACACCGGGAGAAAGTACTTCGATATGATAGTATACTACAAAGCAATGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U584477" ref_strand="+" ref_description="SGN-U584477 Tomato 200607#2 [26 ESTs aligned] (*GB) gi|157351276|emb|CAO41463.1| (e_value=3e-120) unnamed; (*ATH) AT2G40430.2 (e_value=7e-59) |; (*SWP) sp|O22892|GSR2_ARATH (e_value=7e-58) Uncharacterized protein At2g40430 OS=Arabidopsis thaliana GN=At2g40430; ">
      <seq>gctccagctctctcttttttgttctctgaactctcagagacactgtgtcggcgaccagcaagcacagcggcgcagcaaaactctcgtctgtcgactctctatctctcagcgtgacggatttagagagatggggaagaataagagctcaaggaaagggaagaaggcatggagagccaacataagtacggaggatattgaagatttctttgacaactccactaaagatgctctttcaggcggttctcttgctcaagttcccagtgactctctcttttatgtcgacaaatccagagatctttctgtcaaacggaaaattgaaaaacaccgggagaaagtacttcgatatgatagtatactacaaagcaatgcctttgttgaacctgtaccttcttcaactgggaagaaatccaagaagaaaagtaaacttcagatagccaaggatactgctcaacagggtcaaaaggattcgtctggtggagactctggcatggttgacatttggaatgataaagatgaactggtcatcaaaaccaaaaagaagcccaagacttctgttatacctgctgtggaagttgagcctccaggatgctcattcaatcctccatccgaaagtcatcaggatgcattagcttgtgctgttgcagatgaaatgcagaaaatttatagaaatgaattgggtccggagcctattccattggttgttcctggagaggtagtcaatgaagaagatatgtatttccttgaagcggacagtgggagtgacacggagaatgaaaatctagtggaagacggaaaaacagatttggataaaaggccgcaaaagcccaaaatgctgactcaagttgagaagaatcgacgggctagacgcaaagaacagttgaaagcagaagctgaagcaacaaaagcagcacaactctccaaagagattgatagcttaccggatattattcaagaaatagagagagaggaaggagaaaaacagaaacgacatctacgtcgtgtcactgctataaaagaaaaactaaaatcttgtccaccacgcttgggaaagcgcaaattcgtgcctgctcctgctcaggttttactgtctgaagagattactggttccctgcgtaaattaaagggatgttgcacccttgcaagagatcgatttaaaagcctggagaaaaggggactagttgttccttcaaaaaagagtagcaggaaatagagtgaattgcaagtaacacagataaatgttttcatcaccgcactatgagaccatcatcccgatcacctggatgagagacactgtagacagcaaggtgttggtttatgtctgcaaatttggagtggtagagctggctgctcttactgttagcaaaatggagatgtagatctgtttatcttactgatgcatatggttcattacacaatattttatagtcatggtcaagttactttgggagcaaaagtgataattaattactgatgtatctggaggcagaagattggtgtgatttctcttgatgaaccagaaatgattcccagagtcagccttttttaaattttaaaatgggaactctcataatcaatatgtaccccaaagtttttaattactctaattaggtcaactttttatttgatcacattagatcaactatatatcacaaattttgattttcaagacttgaaagacaacattttctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0024K05-1w1Tf/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0024K05.1" temp_strand="+" temp_description="C02SLe0024K05.1  AC226514.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0024K05 sequenced_by:kribb upload_account_name:korea">
        <position start="90130" stop="99955"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90429" g_stop="90548" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="120" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90549" i_stop="93392" i_length="2844">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.528" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93393" g_stop="93565" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="121" r_stop="293" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93566" i_stop="94292" i_length="727">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.706" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="94293" g_stop="94462" g_length="170"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="463" r_length="170" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="94463" i_stop="94630" i_length="168">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="94631" g_stop="94679" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="512" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="94680" i_stop="94766" i_length="87">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="94767" g_stop="94792" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="538" r_length="26" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="94793" i_stop="96135" i_length="1343">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="96136" g_stop="96216" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="619" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="96217" i_stop="96304" i_length="88">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.907" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="96305" g_stop="96415" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="620" r_stop="730" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="96416" i_stop="96532" i_length="117">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="96533" g_stop="96615" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="731" r_stop="813" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="96616" i_stop="97802" i_length="1187">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="97803" g_stop="97922" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="814" r_stop="933" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="97923" i_stop="98014" i_length="92">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="98015" g_stop="98137" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="934" r_stop="1056" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="98138" i_stop="98392" i_length="255">
            <donor d_prob="0.918" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="98393" g_stop="98459" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1057" r_stop="1123" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="98460" i_stop="98549" i_length="90">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="98550" g_stop="98629" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1124" r_stop="1203" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="98630" i_stop="99167" i_length="538">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="99168" g_stop="99655" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1204" r_stop="1691" r_length="488" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0024K05.1" gen_strand="+" ref_id="SGN-U584477" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1691</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0024K05.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U584477" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90429" e_stop="90548"/>
          <exon e_start="93393" e_stop="93565"/>
          <exon e_start="94293" e_stop="94462"/>
          <exon e_start="94631" e_stop="94679"/>
          <exon e_start="94767" e_stop="94792"/>
          <exon e_start="96136" e_stop="96216"/>
          <exon e_start="96305" e_stop="96415"/>
          <exon e_start="96533" e_stop="96615"/>
          <exon e_start="97803" e_stop="97922"/>
          <exon e_start="98015" e_stop="98137"/>
          <exon e_start="98393" e_stop="98459"/>
          <exon e_start="98550" e_stop="98629"/>
          <exon e_start="99168" e_stop="99655"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCCAGCTCTCTCTTTTTTGTTCTCTGAACTCTCAGAGACACTGTGTCGGCGACCAGCAAGCACAGCGGCGCAGCAAAACTCTCGTCTGTCGACTCTCTATCTCTCAGCGTGACGGATTGTAAGCTACCTCATCTCCCATTAGTAATATTTAGTATGTATCTCTCGGTCTCTTTTCTCTGCCTACAGCAAAACAGCAAGCTAAATTTTAAGATATTTCTGTTGTTTTAAGTATTGAATTCTTGTGTTGAATGTTTTTGGGCTGGCTGCCTTGTTCCTGGTAATGTTATTTTATATTTGGATTGTGTTTCTGGCTTGCTGTTGCTGAAGTGTTTTGCCAAGTTAGAATTTTTTTTTTTGTGACTGCTAAGCAACTTGCTAATTGGCATGGCTGCTGCGGTGCTGGCAACTGGTTAGACTATTATGTGCAAGTGAGCCGTGCTGTACTGCTCCGAGCCTGCGAGTGGGCTGCCTGCTATGTTAGTTCACCTTGAAATAGACCAAATTTAGTTCATAGTTTAGCCTATTAAGTTAGTTCATTGTTATAAGAGCAGTGCTAACTTATTACTTAAGTATTGAATGTTGATACTTGACAACAGCGAAGAATGCTAGGCTGTTAGGCTGAGAAGAGTGTTATAAAAAAAGAGACATTACGAGACTAAGAGCCTTTATTTATTTGAATTTTCATGTTAACTTTATAAGTTAAATATTTTGATAATTTTGTTCTCATTTGCACCAAAAAACCATTTTAAAAACACTGAACCGAAGTTTGGTTCGGTATTTGGTACACACTATTTCAAATCTGAATACCGAAGAACCGAACCGGATTTGATACAAGAAAGCAAATAAAGAAAAAAAAAGTAAGACAGTTGAATCTTCTAGCCTTAAACTAAAGATTGAAACGGACTGTACTGTTCCTTTTTATTTTTAAGAGTACTTATTAATTATCTTATTATTGCTAAAAAATGGTTGGGGGCCTAAGGCAAGTTCTCTATTTTCCAATGCATACAGCTGCCCCTGATTGTAAATGTGCAATACATGCAGCTGTTACCAGGCTTTACTAGTCTATGTCTACATAGAGATGTCAATGTGAGTTTGGAACCATCAAAATGAAAAGGACTAAATCCTAGAGTTAGAATCTTATCTTCTTTACTGTTTTGATTCATTAGTCTTTATGCTTTGTGTTTTTCTTTATCAGATCTAAATGAGAAAAAGAAATGGTTAGCTTAATTACAATGTGAACTAGCTCTGGAGATCAGTAGCTAATAGCTAAGTGTGATGTATGTTCATTAGATGCCATATAGGATCAGTAGTCTATGAACTATGAAGAGGTCAGTAAGATGAGTGATCAGTCTTGTTAAGCTTAAGTCTATAATTTATTTGAACTCTATTATGTTTCTGTTAGCGGCAGCCCCTTCATGTGGATATATTGTGTTTGTATGTCGTGATTTCCTCTAGTCTAGATAGTAAAGGTTTAATAAATTTCTATCAACAAGTATTTGACTAATCAGGGATTTTTGAATTAAGGTTCTTGTTGTATTCTAGAACTTTTAGTTATCTTGCCACCTTAAAATTAGCACAAAATGGCTAAAGAATCTTGTGTTGGCCTTCTTGTTCTCATTCATAAACTTGAGATGAAGTCTTGTTGTATATGTTTTCAGCTATAAGGTTGCTGTCCAGGAGGAATATCTTTAGCTCACTTGTAAATAAAGGGAAACCCCTTCCAGTATTAGCAACATCATCTTGTGAGGGGTCTAATTGTATTATGTTCAAGACTATTTTTGTTGAGTCTCTTATTCATGAAGGGTCTAAAACTTGTGATTTTTAACTGAAATAAGTACTAAGAAATGATTTAAGGATAATCAAAAACTTGTAGATGGCCTGTTTCAGCTATGTGTTTGCAAGTCTAGTTTCAAACTTGTTTAGCTTTCCTTCATGTTTATGCTTGAGTAGTTGACTAGTTGATCTGTGACATAAGAGGCTTATCATATCCCGTTATGTGGTTGGGTAACATCTGTCTCTTTGTTTATTTAAGATCCCCTTTAACTTGAGAGGAGTTTTATTTTTGTTCAAGAAAAGATCAAGTTTGTTCAAAAATAATGCTCTCTGGTTGTGTTTGTATTTTTAAAAATGAGAAGATTTGGCATTTAAGAGAATTGTCACTGCTTACTTGAGATTAATGGTACCCCTTCCTAGTCTTGAATGGCTTAAGTATGTTGAAAACTCACTACATGAGCCCCTTTTAAAGTTCTGAACATAGCACCCTTCTTTGTTTTTTAAGTTGTGAGTAAGAAGTACTCCCTCTGTCACCAATTACTTGTCCACTTTTGAATTTGCACACCTATTAAGAAAACAATAATTGACATAGTGAGTTTACCATATTACCCCTATTAATTATGAAGTGGATGAATTGAAACTTAAGACATTCAAGAAGTTTTTACCTTTTACAAAGTAATTAATTGAGGGTATAATAGGTAAAAAAAAATTGGCCTTTCTTGATTTGTCAAAATGGACTAGTAATTAGGGATAGAGTGAGTAGCAGTTTCCTATGCAATTATTTTTTTGCGATTATTTTCTTCATTTTACTGTTCATAAACCCATGATTGTTCAGGGACTTTTTTGCTCTGTTCGATGTGCTTACCACTTCCTAAATCCTGAATAATTAACCTTAGGATCATTAGTTAAGACTAAATCCATTAAGACTTTAGTGGTAATAATTTTCCAGATTGGTTTGGCCCTCCCTGTTTGTGCAGCAGCTGTCAGAGATCCATATCCCATTCTACGAGAGTTTTAGCTTGCCAAATCTCGACAGATTTATTCTTAACACTGTCCACTAATCTCTTTGACTTAGCTACTTGTTCACTTAGGAATCAAGAGGTATAAATTCTCAAGTGACTGTTTTACATTTATGCTAAATCTGTTTTGGGACCATGTTTTCAATATGACTTTTACTGCACTTGTTAAGTAGAGAGATGGGGAAGAATAAGAGCTCAAGGAAAGGGAAGAAGGCATGGAGAGCCAACATAAGTACGGAGGATATTGAAGATTTCTTTGACAACTCCACTAAAGATGCTCTTTCAGGCGGTTCTCTTGCTCAAGTTCCCAGTGACTCTCTCTTTTATGTCGACAAATCCAGAGGTATTCTATTTTTCAGCATTTTTTTCCCGGTTGAAAATTTCCAGAAGTATCTTTTGTTCAAGTAAATAGCAAGGTAAAAAAAAGAACAAGCCGATTTTGATATCAGGCTGGTGTTCACGTATATGTTCTAGCAGCTGATATAGTCTTTAGATGGATGGTATGTATGTGATTTACTGTTCCAACAGATGTATTGAACTAACGTTGGTTGGATAACTGGTTTACTCCACATTTGAAAATGGTATTTTCTTTTAACAGTAGTTTTTTGGTACACGGGAAATAACTGAGTGCTCTGATAATCTTCTCCAGAATTTTGTTTTGGTAGAATCAGTCAAGAGTATTGTGTACTAAGACAAGTAGACCAAATAATTCGGTATCTCATAGAGTTGTAATTATGGAAAAAATTCAATCTTGAGAGCAGATTGAACTTTCATGTCTGTTTTAGACTTGCAGTAATTGTTAGGGTGTTGCTTTTCAGTCAATGGTTCGTGTTCCCATCCAATTGTTGGCTGTAATATGAAGCCGGATGAATTTTGGAGATAGTAACTGACATTTTTGGACTAGAAGAGGGCAGTTTAGAATCACCTTAAGTACTATGTCTCTGGACTATGTAGCAGTTGATGTTCATCATGGGTGCATCTTCCTTTTCCCTTTACTGCAGTTCTGTCGTTTTTTGTTGGTGAATCCTTCTTCAGTGATCAAATGACAAGTTTTTATGTCTACAATCCAGATCTTTCTGTCAAACGGAAAATTGAAAAACACCGGGAGAAAGTACTTCGATATGATAGTATACTACAAAGCAATGCCTTTGTTGAACCTGTACCTTCTTCAACTGGGAAGAAATCCAAGAAGAAAAGTAAACTTCAGATAGCCAAGGATACTGCTCAACAGGGTCAAAAGGTTGTTCACTATTTCATTTTAAATGTTCAACTCTCCAATTGCAAGATGTTATGGCTGATGCTTCCTTGGCATAATGTGCTTCTCTCAATAGGAGAAAAATCTTTTCTTTTGAGTGCAAATGCCTAATGGATCCTCATTGTTTATTTCTTGTTAACTTTGTGTGATTAGGATTCGTCTGGTGGAGACTCTGGCATGGTTGACATTTGGAATGATAAAGGTGTCCTTGTGATTAGAGCCTTTTTGTTCTTCGTCACTTTTGTAGTAAAATGACTTTTCTAATACAGCCTTCGTTGCATTGTTGCAGATGAACTGGTCATCAAAACCAAAAAGGTACACTTTTTTCTCCTACCTGTATTTGAAAATTTTTATTTCTTTTCTCCTCTCCTTATCTTTTTTGTGGCCACTTGTCAGGAACTTTCTTTTCAATTTTGGTGTCCTTTTACATGAAAAACATATTTTAAATCATCTGGATGTAGTCCTTCTAAGTTGTACTGCAATACCTGCTATAGGTTTTCTTAATGCAACCTGCCTTTCTTTATGAGCACTACTATTATTGCCTTATAGTGATTACTTCTTAGTCCACTTAAAAAATAAGTCGTCTTAAGTCAATTGAATCTCTTATTTTTCAAGAAAACATCACATCTAAAAAGCATCTTTGCGATGAACCTTTTCCTTGCACATCCTCTGCATTGCTTATCCTCTCAGAGGATAGATGAGAGTAATAAAGGAAAAAAGACGCACGAGATTGGATATAAAAGATCCTTTATCGTGGAAGGTAATGGACCTAAATAAAGCAAAATGGATGTGGTGAACCATTATAGCTGACCCTAACTATGTCTGTGATTGATACATAGTTGATTGATTGATTCATTTAGTTTTCCATTCACTCGACAAACTTTCACCACTTCATTTGACGAATTAGAATATGCACAGATACAATGATCTGTAACTGATACAAGCTTTCATTGAATAAGATAACATGCATCCAAAAAGAGATTCTTTTCCATTTTGATCATTCCTCAGTTTGGCAGATTGAGATCCTTCCTTTTAGCATTATTGATGCTCTAGGCTGTCTAAAGATCTTGATCAAAATATGTGATGCATGTTTAGATAGTAATTGCATTTCAGGGTTTGGTTTTCTGTACTTTCCTGCTGTTGCGGAGTGAAGTCTTTTCATAATTTTCCCTTTTCAGTAGCTGGGGTAGATTGGATGGTGACACAAGCTTATTTGGTTGCGTTACGATGATGTTATAAAGTCAGTATTAGAACAACTAAAATGATCAAAATAACTGTCATGTATTTTGATCATTTTCTATAATTAAACAGAACACGTATTTAAATGTACAAATATTATTCATGCATTTTTAATACTTGTATTACTCTAATCCCTAAGATACAATCCTTACATTATAGTCCTTTCAGAACTTGTCTCTAAAGACCCCTTGGTGTATATTTTTTGTACCTCCCTGTATTCTTCTTCTTCTTAGTTCCATTTTTTGTTATCTTAACTGTGTATGTTATTTATTTATTATCCTAAAGCTCGAGCATTTGAATTGTGAACGTATGACTTCCCTAGAACAATAACAATTTTGCATCAGTTTACTTTTCGAAAAGGGAAGAGAGAAATCTGCATTAGTATATGTAATCAATTTTATATGCATTGCCTGTGACAGAAGCCCAAGACTTCTGTTATACCTGCTGTGGAAGTTGAGCCTCCAGGATGCTCATTCAATCCTCCATCCGAAAGTCATCAGGTAAAAATTTTTCTGTATGTCACATTTTGCTATTATCGAGCTCCTAGTCCACGCAATTAATAATTCGCTCTGTGTCTTCTCAATTCAGGATGCATTAGCTTGTGCTGTTGCAGATGAAATGCAGAAAATTTATAGAAATGAATTGGGTCCGGAGCCTATTCCATTGGTTGTTCCTGGAGAGGTAGTCAATGAAGAAGATGTAAGTTTAAGCTGCTACTTTCTTGTTAGTACTTTTGACCATGGCTGTTGCAGATGCATCATGGGCTATGTTTTCTTATACTGGGTAAAGTATGCACTGAAGATTCATTTGCCTCAGATGTATTTCCTTGAAGCGGACAGTGGGAGTGACACGGAGAATGAAAATCTAGTGGAAGACGGAAAAACAGATTTGGATAAAAGGTAAGCTTCTATATTGCTCGTCTGTAGTGATAGTGTTAGGGGTTGAAACATGTTCTATTCCTTGCTTGCTTAGTATTAGGGAGTACTTAAAATTATACTTAAAATTTACTCACCTGTGTCTATTCATATTTGTATAGTGAATTGACACTTCTTTGACGATCTTTAGGCTTTAGGCTTCAGAGAAATTAATTATGTGACAGTTCGATGTGTTAAATCTATATGATAAATTTTGCTGCAGTAAACTCAATAACATTTCAATCTCTGGACACTGGTTATACCCAATTAGCTTTAAGTCCTAAATTTTTTTTTGCAACTTTACAAGGCTAACATGAGTTGCCTTGTCCTCGTTTTTGTTCGTGGCTCACAATTCCTTATCATTCATGATCACTAGAAATACAATCTTATTTTATGTGGCTTTGCATGTTTAATAGTTGACATAGTCCTAAGCTGATGGATGTTTATGAGGTCAAAGGCAATATATGTACTGCTACGACTGATGGTCTAAGACATCGTGCTTCCTTCATCCTTATTTATTTGAATCCAGTTTTGCCCTTTTCTGTTTGTTTACTTTTTGCTGCTGGTGGGGGAAGAAGCTTTTATTTCCAGCATTTGTAGTAGTTCTTATTTTTGTCCACCAAGGCTAGGACAGATGGGAAGAATAACCTAGTGTTTTTTGTCTCTACTGAGTTTTGAACCTGACACCTTAGGGTTCTCAACCACTTATTGACTGTAGGCCACACCTTGGGTGCAACGAGTATCCTTTATATTTGGTTAAAGATGCTGAATGAGTACATTGTATATCACTGATATTTGGTTGCTTGGATATGTTCAGACCTCAGTTTAAGTCACCTACATCTGAAATCAGATTTTTAAATGTAAAGGGGTTTGATCCTTAATCTAGCTGAGTTAGATTGTGAGCTAAGTCCCCAGTAAGTGTGATATCCGACGTTATATCTGTTTGCTTTGGTGGTCATGATCCAAATGTCCTAATGATGGTCAGTTGTAGAGTGAACCAGCGTTCAAGATTTTCTTTTTTTGTAAGTCAGTTATGTGTTCTGAATGTTTGCAGTGTGCTAACTTCAGCTACGTTGGCAATCCATGTTACATTGAGTGCATTTTTGCTAGTCGTCAGATCTTTAATTTACTACTATATGAAATTATACATCATCAATTTTAACTTCATTCAGGCCGCAAAAGCCCAAAATGCTGACTCAAGTTGAGAAGAATCGACGGGCTAGACGCAAAGAACAGTTGAAAGCAGAAGCTGAAGCAACAAAAGCAGCACAACTCTCCAAAGAGATTGATAGGTTTGCTGATATTTCGAATATCAGGCTCATCATATTCCAGTTAAATAGAATTTGCCTTTTGTATAGATTATGATATGTTCTTGTGCCTGCAGCTTACCGGATATTATTCAAGAAATAGAGAGAGAGGAAGGAGAAAAACAGAAACGACATCTACGTCGTGTCACTGCTATAAAAGAAAAACTAAAATCTTGTCCACCACGCTTGGGAAAGCGCAAGTATGTACTGTTTCATTTTGAAGTAAAAAATTTCAACAATTGATTTGCTGAGAAAAAGTGTTTTCATAGAACATCAGATTTTAAAGGGATTTTTATGGTTATAACTCTTTTAAAAATGTTTCAACTGGGAGCTTGGGGTTTCAAAGAATGATGATTGCATGAGCTGAGCAATGAGACTCATTTTCTTGTGGTTTTGGTTTTTTCCTGCTATAACTTCAGTGTTGACAAAAAGATAATTGACCTATGTGATTTCAGATTCGTGCCTGCTCCTGCTCAGGTTTTACTGTCTGAAGAGATTACTGGTTCCCTGCGTAAATTAAAGGTTGCATTCCTGATTTCAATTTTCTCCAAATTGGCTGTCTGTATTTTCAAATTTTTTCTCTTATGTTATTTGTCTTCCTGTTTCAAACAGGGATGTTGCACCCTTGCAAGAGATCGATTTAAAAGCCTGGAGAAAAGGGGACTAGTTGTTCCTTCAAAAAAGAGTAGCAGGTTAGTAAAGATTGCTTCTTGTTTGAAATTAAGCCACACTTTCTGGTTTTGGCTTGCTTATTATTTGAAACTAAAAGTATTGCATGCTGTCTTGAAGTGTGTGTGAACCATGTGACACTGAGACAATTGCGGAGTAATCTCTTTTTCTTTAAAGTTTTTGACAGTGAGCTTTGTGCACGTTCCTAATGGCATCATAGTTGATCATAAATTTTGACAATACACCTTGCGGCTAACAAGATGTGAGGAAAATCACCAAAAATTGTTACCAATCGTTTGGGATCAAAAACTAGTATTTTGATAGTGAGCGTCATGTTCCTGATTCGCTATAATTGGAAATTCTGTCATTTCAATGTAACATTAAAGCTTGTGTTTGTGATAACAAATGCTTAAACTTCCCCTGCTTTTGGTTTCAACTTTCAATTAACGGAACTCATCTTTTCTCTGCATGTATCGAGCCATTATATACACTGTTTCAAAAGAAACATTCAGAGTATCAAAACATCTCTTGCTAATTGTTTCTGGTATGGGATGTGTGCAGGAAATAGAGTGAATTGCAAGTAACACAGATAAATGTTTTCATCACCGCACTATGAGACCATCATCCCGATCACCTGGATGAGAGACACTGTAGACAGCAAGGTGTTGGTTTATGTCTGCAAATTTGGAGTGGTAGAGCTGGCTGCTCTTACTGTTAGCAAAATGGAGATGTAGATCTGTTTATCTTACTGATGCATATGGTTCATTACACAATATTTTATAGTCATGGTCAAGTTACTTTGGGAGCAAAAGTGATAATTAATTACTGATGTATCTGGAGGCAGAAGATTGGTGTGATTTCTCTTGATGAACCAGAAATGATTCCCAGAGTCAGCCTTTTTTAAATTTTAAAATGGGAACTCTCATAATCAATATGTACCCCAAAGTTTTTAATTACTCTAATTAGGTCAACTTTTTATTTGATCACATTAGATCAACTATATATCACAAATTTTGATTTTCAAGACTTGAAAGACAACATTTTCTACT</genome_strand>
        <mrna_strand>GCTCCAGCTCTCTCTTTTTTGTTCTCTGAACTCTCAGAGACACTGTGTCGGCGACCAGCAAGCACAGCGGCGCAGCAAAACTCTCGTCTGTCGACTCTCTATCTCTCAGCGTGACGGATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAGAGATGGGGAAGAATAAGAGCTCAAGGAAAGGGAAGAAGGCATGGAGAGCCAACATAAGTACGGAGGATATTGAAGATTTCTTTGACAACTCCACTAAAGATGCTCTTTCAGGCGGTTCTCTTGCTCAAGTTCCCAGTGACTCTCTCTTTTATGTCGACAAATCCAGAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTTCTGTCAAACGGAAAATTGAAAAACACCGGGAGAAAGTACTTCGATATGATAGTATACTACAAAGCAATGCCTTTGTTGAACCTGTACCTTCTTCAACTGGGAAGAAATCCAAGAAGAAAAGTAAACTTCAGATAGCCAAGGATACTGCTCAACAGGGTCAAAAG........................................................................................................................................................................GATTCGTCTGGTGGAGACTCTGGCATGGTTGACATTTGGAATGATAAAG.......................................................................................ATGAACTGGTCATCAAAACCAAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCCCAAGACTTCTGTTATACCTGCTGTGGAAGTTGAGCCTCCAGGATGCTCATTCAATCCTCCATCCGAAAGTCATCAG........................................................................................GATGCATTAGCTTGTGCTGTTGCAGATGAAATGCAGAAAATTTATAGAAATGAATTGGGTCCGGAGCCTATTCCATTGGTTGTTCCTGGAGAGGTAGTCAATGAAGAAGAT.....................................................................................................................ATGTATTTCCTTGAAGCGGACAGTGGGAGTGACACGGAGAATGAAAATCTAGTGGAAGACGGAAAAACAGATTTGGATAAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCAAAAGCCCAAAATGCTGACTCAAGTTGAGAAGAATCGACGGGCTAGACGCAAAGAACAGTTGAAAGCAGAAGCTGAAGCAACAAAAGCAGCACAACTCTCCAAAGAGATTGATAG............................................................................................CTTACCGGATATTATTCAAGAAATAGAGAGAGAGGAAGGAGAAAAACAGAAACGACATCTACGTCGTGTCACTGCTATAAAAGAAAAACTAAAATCTTGTCCACCACGCTTGGGAAAGCGCAA...............................................................................................................................................................................................................................................................ATTCGTGCCTGCTCCTGCTCAGGTTTTACTGTCTGAAGAGATTACTGGTTCCCTGCGTAAATTAAAG..........................................................................................GGATGTTGCACCCTTGCAAGAGATCGATTTAAAAGCCTGGAGAAAAGGGGACTAGTTGTTCCTTCAAAAAAGAGTAGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATAGAGTGAATTGCAAGTAACACAGATAAATGTTTTCATCACCGCACTATGAGACCATCATCCCGATCACCTGGATGAGAGACACTGTAGACAGCAAGGTGTTGGTTTATGTCTGCAAATTTGGAGTGGTAGAGCTGGCTGCTCTTACTGTTAGCAAAATGGAGATGTAGATCTGTTTATCTTACTGATGCATATGGTTCATTACACAATATTTTATAGTCATGGTCAAGTTACTTTGGGAGCAAAAGTGATAATTAATTACTGATGTATCTGGAGGCAGAAGATTGGTGTGATTTCTCTTGATGAACCAGAAATGATTCCCAGAGTCAGCCTTTTTTAAATTTTAAAATGGGAACTCTCATAATCAATATGTACCCCAAAGTTTTTAATTACTCTAATTAGGTCAACTTTTTATTTGATCACATTAGATCAACTATATATCACAAATTTTGATTTTCAAGACTTGAAAGACAACATTTTCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>16</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="24280" PGL_stop="16949"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24280" e_stop="24012"/>
            <exon e_start="19878" e_stop="19813"/>
            <exon e_start="19712" e_stop="19662"/>
            <exon e_start="19383" e_stop="19304"/>
            <exon e_start="18528" e_stop="18484"/>
            <exon e_start="17233" e_stop="16949"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.890" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24280" e_stop="24012" e_length="269"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.890">
            <gDNA_intron_boundary i_start="24011" i_stop="19879" i_length="4133"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="19878" e_stop="19813" e_length="66"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.995">
            <gDNA_intron_boundary i_start="19812" i_stop="19713" i_length="100"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="19712" e_stop="19662" e_length="51"/>
          </exon>
          <intron i_serial="3" don_prob="0.970" acc_prob="0.985">
            <gDNA_intron_boundary i_start="19661" i_stop="19384" i_length="278"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19383" e_stop="19304" e_length="80"/>
          </exon>
          <intron i_serial="4" don_prob="0.988" acc_prob="0.996">
            <gDNA_intron_boundary i_start="19303" i_stop="18529" i_length="775"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="18528" e_stop="18484" e_length="45"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="18483" i_stop="17234" i_length="1250"/>
          </intron>
          <exon e_serial="6" e_score="0.996">
            <gDNA_exon_boundary e_start="17233" e_stop="16949" e_length="285"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24280" stop="24012"/>
              <exon start="19878" stop="19813"/>
              <exon start="19712" stop="19662"/>
              <exon start="19383" stop="19304"/>
              <exon start="18528" stop="18484"/>
              <exon start="17233" stop="16949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575589" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCACAATCCGTGGAAGAGAGCAAAGATGAGAGGGATTCTCCGGCGGTTGATCGGCGGCAGACAGCCATTCACATCATCACGGCGTTCTTCTGAATTAGGTCAAACATTAATGGTGTCATCAGCAGCTACAGTCTCTTACTCCACTGTAACTTTCATGGAGAAACCTAATCTACTTTATGGATTCCCAATTGCCGCAAACCTCCTCTCCGATTTCCAGTCTCTTCACGTTCTCAATCAATATCGAAACTTCTCCAGTCCATCTTCCTCAG : GTCCATCAAATATTGTATCAATTGAGTCTGAAGAACAATTCAATACTTCACTTCGCAAAGTACAAG : ATGAATCCTTGCCTGCAATATTCTACTTCACTGCTGTCTGGTGTGGGCCCT : GTAGGTTGTTATCTCCTGTGATTGGCCAATTAAGTGAGAAATATCCTCATGTGACAACATATAAAGTTGACATTGACAAG : GAAGGGCTTGGAAATGCATTGAGCAAGTTGAACATTACCTCAGTG : CCTACATTGCACTTCTTTCAAAATGGGAAAAAAACATCTGAAGTTATCGGTGCTGATGTCCAACTCTTGAAAGAAACCATGGAAGAGCTCTACAAATGATATTTCAACCTTCCAGCAATTCATGTTTGGCTGGAAGTTGATATTTGCAACAGTAAATCTTGCGTTTCACTCTTTTATAGTTTCAGTGATCATTCATAGAATTTAAAGTATGCTCAGTTGTAACGTTATCCAGTGCCAAGTATCGTTCTCTCTTTCTTTATGGTAAAAAGCAACATGTTTCCTGTG</gDNA_template>
            <first_frame> P  Q  S  V  E  E  S  K  D  E  R  D  S  P  A  V  D  R  R  Q  T  A  I  H  I  I  T  A  F  F  *  I  R  S  N  I  N  G  V  I  S  S  Y  S  L  L  L  H  C  N  F  H  G  E  T  *  S  T  L  W  I  P  N  C  R  K  P  P  L  R  F  P  V  S  S  R  S  Q  S  I  S  K  L  L  Q  S  I  F  L  R :   S  I  K  Y  C  I  N  *  V  *  R  T  I  Q  Y  F  T  S  Q  S  T  R :   *  I  L  A  C  N  I  L  L  H  C  C  L  V  W  A  L :   *  V  V  I  S  C  D  W  P  I  K  *  E  I  S  S  C  D  N  I  *  S  *  H  *  Q   : G  R  A  W  K  C  I  E  Q  V  E  H  Y  L  S   : A  Y  I  A  L  L  S  K  W  E  K  N  I  *  S  Y  R  C  *  C  P  T  L  E  R  N  H  G  R  A  L  Q  M  I  F  Q  P  S  S  N  S  C  L  A  G  S  *  Y  L  Q  Q  *  I  L  R  F  T  L  L  *  F  Q  *  S  F  I  E  F  K  V  C  S  V  V  T  L  S  S  A  K  Y  R  S  L  F  L  Y  G  K  K  Q  H  V  S  C  </first_frame>
            <second_frame>  H  N  P  W  K  R  A  K  M  R  G  I  L  R  R  L  I  G  G  R  Q  P  F  T  S  S  R  R  S  S  E  L  G  Q  T  L  M  V  S  S  A  A  T  V  S  Y  S  T  V  T  F  M  E  K  P  N  L  L  Y  G  F  P  I  A  A  N  L  L  S  D  F  Q  S  L  H  V  L  N  Q  Y  R  N  F  S  S  P  S  S  S   : G  P  S  N  I  V  S  I  E  S  E  E  Q  F  N  T  S  L  R  K  V  Q   : D  E  S  L  P  A  I  F  Y  F  T  A  V  W  C  G  P   : C  R  L  L  S  P  V  I  G  Q  L  S  E  K  Y  P  H  V  T  T  Y  K  V  D  I  D  K  :  E  G  L  G  N  A  L  S  K  L  N  I  T  S  V  :  P  T  L  H  F  F  Q  N  G  K  K  T  S  E  V  I  G  A  D  V  Q  L  L  K  E  T  M  E  E  L  Y  K  *  Y  F  N  L  P  A  I  H  V  W  L  E  V  D  I  C  N  S  K  S  C  V  S  L  F  Y  S  F  S  D  H  S  *  N  L  K  Y  A  Q  L  *  R  Y  P  V  P  S  I  V  L  S  F  F  M  V  K  S  N  M  F  P  V </second_frame>
            <third_frame>   T  I  R  G  R  E  Q  R  *  E  G  F  S  G  G  *  S  A  A  D  S  H  S  H  H  H  G  V  L  L  N  *  V  K  H  *  W  C  H  Q  Q  L  Q  S  L  T  P  L  *  L  S  W  R  N  L  I  Y  F  M  D  S  Q  L  P  Q  T  S  S  P  I  S  S  L  F  T  F  S  I  N  I  E  T  S  P  V  H  L  P  Q  :  V  H  Q  I  L  Y  Q  L  S  L  K  N  N  S  I  L  H  F  A  K  Y  K  :  M  N  P  C  L  Q  Y  S  T  S  L  L  S  G  V  G  P  :  V  G  C  Y  L  L  *  L  A  N  *  V  R  N  I  L  M  *  Q  H  I  K  L  T  L  T  R :   K  G  L  E  M  H  *  A  S  *  T  L  P  Q  C :   L  H  C  T  S  F  K  M  G  K  K  H  L  K  L  S  V  L  M  S  N  S  *  K  K  P  W  K  S  S  T  N  D  I  S  T  F  Q  Q  F  M  F  G  W  K  L  I  F  A  T  V  N  L  A  F  H  S  F  I  V  S  V  I  I  H  R  I  *  S  M  L  S  C  N  V  I  Q  C  Q  V  S  F  S  L  S  L  W  *  K  A  T  C  F  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0024K05.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24279" stop="24012"/>
                    <exon start="19878" stop="19813"/>
                    <exon start="19712" stop="19662"/>
                    <exon start="19383" stop="19304"/>
                    <exon start="18528" stop="18484"/>
                    <exon start="17233" stop="17135"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>606</number_coding_nucleotides>
                  <number_encoded_amino_acids>202</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HNPWKRAKMRGILRRLIGGRQPFTSSRRSSELGQTLMVSSAATVSYSTVTFMEKPNLLYGFPIAANLLSDFQSLHVLNQYRNFSSPSSSGPSNIVSIESEEQFNTSLRKVQDESLPAIFYFTAVWCGPCRLLSPVIGQLSEKYPHVTTYKVDIDKEGLGNALSKLNITSVPTLHFFQNGKKTSEVIGADVQLLKETMEELYK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="24261" e_stop="24012"/>
            <exon e_start="19878" e_stop="19813"/>
            <exon e_start="19712" e_stop="19662"/>
            <exon e_start="19383" e_stop="19033"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.890" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.985" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24261" e_stop="24012" e_length="250"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.890">
            <gDNA_intron_boundary i_start="24011" i_stop="19879" i_length="4133"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="19878" e_stop="19813" e_length="66"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.995">
            <gDNA_intron_boundary i_start="19812" i_stop="19713" i_length="100"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="19712" e_stop="19662" e_length="51"/>
          </exon>
          <intron i_serial="3" don_prob="0.970" acc_prob="0.985">
            <gDNA_intron_boundary i_start="19661" i_stop="19384" i_length="278"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="19383" e_stop="19033" e_length="351"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24261" stop="24012"/>
              <exon start="19878" stop="19813"/>
              <exon start="19712" stop="19662"/>
              <exon start="19383" stop="19033"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587609" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAAAGATGAGAGGGATTCTCCGGCGGTTGATCGGCGGCAGACAGCCATTCACATCATCACGGCGTTCTTCTGAATTAGGTCAAACATTAATGGTGTCATCAGCAGCTACAGTCTCTTACTCCACTGTAACTTTCATGGAGAAACCTAATCTACTTTATGGATTCCCAATTGCCGCAAACCTCCTCTCCGATTTCCAGTCTCTTCACGTTCTCAATCAATATCGAAACTTCTCCAGTCCATCTTCCTCAG : GTCCATCAAATATTGTATCAATTGAGTCTGAAGAACAATTCAATACTTCACTTCGCAAAGTACAAG : ATGAATCCTTGCCTGCAATATTCTACTTCACTGCTGTCTGGTGTGGGCCCT : GTAGGTTGTTATCTCCTGTGATTGGCCAATTAAGTGAGAAATATCCTCATGTGACAACATATAAAGTTGACATTGACAAGGTAAAAAAACATCAGATTGCTTTCAGGAACCCTTATTAGTGTGTCATGGAACCCACTCTTCTGGGGTGCTGATACATGTCAATTCTTTCTTTCTTTCTTGGATAAGTTGAATATTTGTTTTTCTACGAATAAACCAATTTGGTGGTCATATACAAAAGGAAGCTACATCAGACCAGTAAGATGTATCTATATACTGAATTACAATATCAGGTCATCTACAAAGTAGTGTAATCCATTGTTTGCCAGATAGCAACACACGTCACTGAATGAA</gDNA_template>
            <first_frame> A  K  M  R  G  I  L  R  R  L  I  G  G  R  Q  P  F  T  S  S  R  R  S  S  E  L  G  Q  T  L  M  V  S  S  A  A  T  V  S  Y  S  T  V  T  F  M  E  K  P  N  L  L  Y  G  F  P  I  A  A  N  L  L  S  D  F  Q  S  L  H  V  L  N  Q  Y  R  N  F  S  S  P  S  S  S   : G  P  S  N  I  V  S  I  E  S  E  E  Q  F  N  T  S  L  R  K  V  Q   : D  E  S  L  P  A  I  F  Y  F  T  A  V  W  C  G  P   : C  R  L  L  S  P  V  I  G  Q  L  S  E  K  Y  P  H  V  T  T  Y  K  V  D  I  D  K  V  K  K  H  Q  I  A  F  R  N  P  Y  *  C  V  M  E  P  T  L  L  G  C  *  Y  M  S  I  L  S  F  F  L  G  *  V  E  Y  L  F  F  Y  E  *  T  N  L  V  V  I  Y  K  R  K  L  H  Q  T  S  K  M  Y  L  Y  T  E  L  Q  Y  Q  V  I  Y  K  V  V  *  S  I  V  C  Q  I  A  T  H  V  T  E  *  </first_frame>
            <second_frame>  Q  R  *  E  G  F  S  G  G  *  S  A  A  D  S  H  S  H  H  H  G  V  L  L  N  *  V  K  H  *  W  C  H  Q  Q  L  Q  S  L  T  P  L  *  L  S  W  R  N  L  I  Y  F  M  D  S  Q  L  P  Q  T  S  S  P  I  S  S  L  F  T  F  S  I  N  I  E  T  S  P  V  H  L  P  Q  :  V  H  Q  I  L  Y  Q  L  S  L  K  N  N  S  I  L  H  F  A  K  Y  K  :  M  N  P  C  L  Q  Y  S  T  S  L  L  S  G  V  G  P  :  V  G  C  Y  L  L  *  L  A  N  *  V  R  N  I  L  M  *  Q  H  I  K  L  T  L  T  R  *  K  N  I  R  L  L  S  G  T  L  I  S  V  S  W  N  P  L  F  W  G  A  D  T  C  Q  F  F  L  S  F  L  D  K  L  N  I  C  F  S  T  N  K  P  I  W  W  S  Y  T  K  G  S  Y  I  R  P  V  R  C  I  Y  I  L  N  Y  N  I  R  S  S  T  K  *  C  N  P  L  F  A  R  *  Q  H  T  S  L  N  E </second_frame>
            <third_frame>   K  D  E  R  D  S  P  A  V  D  R  R  Q  T  A  I  H  I  I  T  A  F  F  *  I  R  S  N  I  N  G  V  I  S  S  Y  S  L  L  L  H  C  N  F  H  G  E  T  *  S  T  L  W  I  P  N  C  R  K  P  P  L  R  F  P  V  S  S  R  S  Q  S  I  S  K  L  L  Q  S  I  F  L  R :   S  I  K  Y  C  I  N  *  V  *  R  T  I  Q  Y  F  T  S  Q  S  T  R :   *  I  L  A  C  N  I  L  L  H  C  C  L  V  W  A  L :   *  V  V  I  S  C  D  W  P  I  K  *  E  I  S  S  C  D  N  I  *  S  *  H  *  Q  G  K  K  T  S  D  C  F  Q  E  P  L  L  V  C  H  G  T  H  S  S  G  V  L  I  H  V  N  S  F  F  L  S  W  I  S  *  I  F  V  F  L  R  I  N  Q  F  G  G  H  I  Q  K  E  A  T  S  D  Q  *  D  V  S  I  Y  *  I  T  I  S  G  H  L  Q  S  S  V  I  H  C  L  P  D  S  N  T  R  H  *  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0024K05.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24261" stop="24012"/>
                    <exon start="19878" stop="19813"/>
                    <exon start="19712" stop="19662"/>
                    <exon start="19383" stop="19265"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>483</number_coding_nucleotides>
                  <number_encoded_amino_acids>161</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AKMRGILRRLIGGRQPFTSSRRSSELGQTLMVSSAATVSYSTVTFMEKPNLLYGFPIAANLLSDFQSLHVLNQYRNFSSPSSSGPSNIVSIESEEQFNTSLRKVQDESLPAIFYFTAVWCGPCRLLSPVIGQLSEKYPHVTTYKVDIDKVKKHQIAFRNPY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="44387" PGL_stop="44014"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44387" e_stop="44014"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="44387" e_stop="44014" e_length="374"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44387" stop="44014"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U601028" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCATACTAAAAAGAAATGCTCTTCAAAAGAGGAAAACTTACAAACAGACAGCATTTACATTGAAAGGGTGGTATATTCACCCTATGTATGAAATCTAAAAGAAGAAGGTTAAGGAATACACAAATCCAAGTTGATCCTAATGCTACTTTTTTCTTTTCAAGGCTCTTCATATTTTGATCTCATTCCTACTCTATAGTTATTTCCAAGATAGTGGTAAGTCTGGGTTTCTTGTATCTCTTTAGATACAGAGATGAACATACAACACTTACAGATGACATTGCCATGCATGCACCAGCTACCCATGGTGGCAACTCCAGTTTTAGAAAAGGGAAGAAAACCCCAGCAGCCACGGGGATGGAAATCACATTGTACGC</gDNA_template>
            <first_frame> S  Y  *  K  E  M  L  F  K  R  G  K  L  T  N  R  Q  H  L  H  *  K  G  G  I  F  T  L  C  M  K  S  K  R  R  R  L  R  N  T  Q  I  Q  V  D  P  N  A  T  F  F  F  S  R  L  F  I  F  *  S  H  S  Y  S  I  V  I  S  K  I  V  V  S  L  G  F  L  Y  L  F  R  Y  R  D  E  H  T  T  L  T  D  D  I  A  M  H  A  P  A  T  H  G  G  N  S  S  F  R  K  G  K  K  T  P  A  A  T  G  M  E  I  T  L  Y   </first_frame>
            <second_frame>  H  T  K  K  K  C  S  S  K  E  E  N  L  Q  T  D  S  I  Y  I  E  R  V  V  Y  S  P  Y  V  *  N  L  K  E  E  G  *  G  I  H  K  S  K  L  I  L  M  L  L  F  S  F  Q  G  S  S  Y  F  D  L  I  P  T  L  *  L  F  P  R  *  W  *  V  W  V  S  C  I  S  L  D  T  E  M  N  I  Q  H  L  Q  M  T  L  P  C  M  H  Q  L  P  M  V  A  T  P  V  L  E  K  G  R  K  P  Q  Q  P  R  G  W  K  S  H  C  T  </second_frame>
            <third_frame>   I  L  K  R  N  A  L  Q  K  R  K  T  Y  K  Q  T  A  F  T  L  K  G  W  Y  I  H  P  M  Y  E  I  *  K  K  K  V  K  E  Y  T  N  P  S  *  S  *  C  Y  F  F  L  F  K  A  L  H  I  L  I  S  F  L  L  Y  S  Y  F  Q  D  S  G  K  S  G  F  L  V  S  L  *  I  Q  R  *  T  Y  N  T  Y  R  *  H  C  H  A  C  T  S  Y  P  W  W  Q  L  Q  F  *  K  R  E  E  N  P  S  S  H  G  D  G  N  H  I  V  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0024K05.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44210" stop="44016"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SHSYSIVISKIVVSLGFLYLFRYRDEHTTLTDDIAMHAPATHGGNSSFRKGKKTPAATGMEITLY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="45261" PGL_stop="52625"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="45261" e_stop="45341"/>
            <exon e_start="47361" e_stop="47730"/>
            <exon e_start="48203" e_stop="48447"/>
            <exon e_start="48597" e_stop="48681"/>
            <exon e_start="48775" e_stop="48960"/>
            <exon e_start="49037" e_stop="49204"/>
            <exon e_start="49294" e_stop="49485"/>
            <exon e_start="50918" e_stop="51089"/>
            <exon e_start="51875" e_stop="52046"/>
            <exon e_start="52196" e_stop="52625"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.982" e_score="0.988"/>
          <exon-intron don_prob="1.000" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.950" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.945" acc_prob="0.979" e_score="0.994"/>
          <exon-intron don_prob="0.995" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="45261" e_stop="45341" e_length="81"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.982">
            <gDNA_intron_boundary i_start="45342" i_stop="47360" i_length="2019"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="47361" e_stop="47730" e_length="370"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.976">
            <gDNA_intron_boundary i_start="47731" i_stop="48202" i_length="472"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="48203" e_stop="48447" e_length="245"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="48448" i_stop="48596" i_length="149"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="48597" e_stop="48681" e_length="85"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="48682" i_stop="48774" i_length="93"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="48775" e_stop="48960" e_length="186"/>
          </exon>
          <intron i_serial="5" don_prob="0.977" acc_prob="0.999">
            <gDNA_intron_boundary i_start="48961" i_stop="49036" i_length="76"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="49037" e_stop="49204" e_length="168"/>
          </exon>
          <intron i_serial="6" don_prob="0.950" acc_prob="0.998">
            <gDNA_intron_boundary i_start="49205" i_stop="49293" i_length="89"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="49294" e_stop="49485" e_length="192"/>
          </exon>
          <intron i_serial="7" don_prob="0.995" acc_prob="1.000">
            <gDNA_intron_boundary i_start="49486" i_stop="50917" i_length="1432"/>
          </intron>
          <exon e_serial="8" e_score="0.994">
            <gDNA_exon_boundary e_start="50918" e_stop="51089" e_length="172"/>
          </exon>
          <intron i_serial="8" don_prob="0.945" acc_prob="0.979">
            <gDNA_intron_boundary i_start="51090" i_stop="51874" i_length="785"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="51875" e_stop="52046" e_length="172"/>
          </exon>
          <intron i_serial="9" don_prob="0.995" acc_prob="1.000">
            <gDNA_intron_boundary i_start="52047" i_stop="52195" i_length="149"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="52196" e_stop="52625" e_length="430"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45261" stop="45341"/>
              <exon start="47361" stop="47730"/>
              <exon start="48203" stop="48447"/>
              <exon start="48597" stop="48681"/>
              <exon start="48775" stop="48960"/>
              <exon start="49037" stop="49204"/>
              <exon start="49294" stop="49485"/>
              <exon start="50918" stop="51089"/>
              <exon start="51875" stop="52046"/>
              <exon start="52196" stop="52625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571954" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="48329" stop="48447"/>
              <exon start="48597" stop="48634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587386" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTGTATCGGCTCTTTGCTTCTTCTTCTTCTTCTTCTCGAGCTTTCTGCAAAAATTGTATCCAGAACGTTAATTTTCCAG : TGAATCTTAAATAGTTTGGAGTGAGAAGAGAATGACAAAGAAGCGAGAAGTAGAAGATGGCGTGGTGCCTGCGGAGTCGACTGCAAAACGGCAGAAGGTAATGGATCAGTCGTCTCCCTCTCTTCCACCAGTTGCTTTTGAGAATCCACTTCTTCCACTTGCATCTTATGATGATGATGAAGACGACGAGGATGATGGTACGAAAGGACACATTCCTGAGCAAGTTATAAATAATGGTGGAGACAAGGAGCAAAATGGCTACTCATCTGACGATAAAGAAGATGAGGATGATGGTAGAAGCCAAGGGAAGCGAAATCGTGCAATTGAGATTAGGAGGGACTGCCCCTATCTTGATACTGTGAACAGACAG : GTATTGGATTTTGACTTCGAGAAATTTTGTTCGGTCTCTCTTACAAATTTAAATGTGTATGCATGTTTAGTCTGTGGGAAATATTTTCAAGGAAGGGGACCAAAATCTCATGCGTATACACACAGTCTTGAAGCAGGACACCACGTGTTCATCAATTTACGAACAGAGAAAGTTTATTGTCTTCCTGATGGATATGAAGTCATAGATCCATCGCTTGATGACATTATTCATGTGCTGAATCCAAG : ATTTGCTCAAGAACAGGTTAAGCAACTCGATAAGAGCCGACAGTGGTCTAGGGCACTTGATGGGTCTGATTATCTTCCTGGAACG : GTTGGGCTGAATAACATCAAGGAGACTGATTTTGTCAATGTCACGATTCAGTCATTGATGCGAGTAACTCCCTTGAGAAACTTCTTTCTTATCCCTGAGAATTATCAACACAATAGATCTCCTCTTGTTCATAGATTTGGAGAGCTTACCCGAAAGATTTGGCACGCAAGGAACTTTAAAGGACAG : GTCAGTCCGCATGAGTTCTTGCAAGCGGTTATGAAAGCTAGTAAAAAACGTTTTCGGATAGGTGCCCAGTCTGACCCTGTTGAATTTATGTCATGGCTCCTGAATACCCTTCACACGGAGCTTAGAAGTTCCAAAAAAGGCAGTAGCATAATCCATCGGTGCTTTCAG : GGGGAATTGGAGGTTGTGAAAGAGATGCATAATAGATCTATTGCTGAAAAGAGGGAGAATGGGGAGGATGGTGAACATGAATCTCACAATACTGGCATGGAAACTAGCAGAATGCCTTTTATAATGCTTGGACTTGATTTGCCACCACCTCCTCTTTTTACAGATGTCATGGAAAAGAATATTATTCCCCAG : GTTCCATTATTCAACATACTAAAGAAATTTGATGGTGATACTGTGACTGAAGTTGTAAGGCCCCGTATAGCAAGGATGGGATACCGTGTGACAAAATTGCCAAAGTATCTAATTCTCCACATGCGTAGGTTTACAAAGAACAATTTCTTTATGGAGAAAAATCCTACACTTG : TGAACTTCCCGGTGAAGAATCTAGAGCTCAAGGATTATATTCCCCTGCCAGCACCAAAGGAGAATGAGAAACTTCGCTCAAAATATGATTTGATTGCTAATATTGTTCATGATGGAAAGCCAGGCGAAGGCTCATACAGAGTGTTTGTCCAACGAAAATCAGAAGAACTTTG : GTATGAGATGCAAGACCTACATGTTTCTGAAACTCTTCCCCAGATGGTTGCGCTTTCTGAGACTTATATGCAGATATATGAGCAGCATCAGCAGTAATGAACCTCACAAGTAACATCAGAAACATCAACCTCTGCCTCTCCTCTTCTTTTTGAAATGCCAATTTCGACTTTTAGATATCTAATGAAGAGTATTCTACTCGTTGAGGGATAGTGATCTTTGCGATTTATTTTTCCTTTGTTGTATGTAAATCCTGCTGTTTTTGTGTTGCTTATGCTTAAGATTACTATTACATGGGGAATTATGAGAACTCTAGCTTTGGATTTATCCACTTGCTATTTTTTCTTCCATTTGTAGGAATATATATCTTCTTATGAATTCCAACTGAAATTTTAGTAAATTAAGATTGGAGTTAGATTTTAACTTCTTCAG</gDNA_template>
            <first_frame> N  C  I  G  S  L  L  L  L  L  L  L  L  E  L  S  A  K  I  V  S  R  T  L  I  F  Q  :  *  I  L  N  S  L  E  *  E  E  N  D  K  E  A  R  S  R  R  W  R  G  A  C  G  V  D  C  K  T  A  E  G  N  G  S  V  V  S  L  S  S  T  S  C  F  *  E  S  T  S  S  T  C  I  L  *  *  *  *  R  R  R  G  *  W  Y  E  R  T  H  S  *  A  S  Y  K  *  W  W  R  Q  G  A  K  W  L  L  I  *  R  *  R  R  *  G  *  W  *  K  P  R  E  A  K  S  C  N  *  D  *  E  G  L  P  L  S  *  Y  C  E  Q  T   : G  I  G  F  *  L  R  E  I  L  F  G  L  S  Y  K  F  K  C  V  C  M  F  S  L  W  E  I  F  S  R  K  G  T  K  I  S  C  V  Y  T  Q  S  *  S  R  T  P  R  V  H  Q  F  T  N  R  E  S  L  L  S  S  *  W  I  *  S  H  R  S  I  A  *  *  H  Y  S  C  A  E  S  K  :  I  C  S  R  T  G  *  A  T  R  *  E  P  T  V  V  *  G  T  *  W  V  *  L  S  S  W  N   : G  W  A  E  *  H  Q  G  D  *  F  C  Q  C  H  D  S  V  I  D  A  S  N  S  L  E  K  L  L  S  Y  P  *  E  L  S  T  Q  *  I  S  S  C  S  *  I  W  R  A  Y  P  K  D  L  A  R  K  E  L  *  R  T   : G  Q  S  A  *  V  L  A  S  G  Y  E  S  *  *  K  T  F  S  D  R  C  P  V  *  P  C  *  I  Y  V  M  A  P  E  Y  P  S  H  G  A  *  K  F  Q  K  R  Q  *  H  N  P  S  V  L  S   : G  G  I  G  G  C  E  R  D  A  *  *  I  Y  C  *  K  E  G  E  W  G  G  W  *  T  *  I  S  Q  Y  W  H  G  N  *  Q  N  A  F  Y  N  A  W  T  *  F  A  T  T  S  S  F  Y  R  C  H  G  K  E  Y  Y  S  P   : G  S  I  I  Q  H  T  K  E  I  *  W  *  Y  C  D  *  S  C  K  A  P  Y  S  K  D  G  I  P  C  D  K  I  A  K  V  S  N  S  P  H  A  *  V  Y  K  E  Q  F  L  Y  G  E  K  S  Y  T  C :   E  L  P  G  E  E  S  R  A  Q  G  L  Y  S  P  A  S  T  K  G  E  *  E  T  S  L  K  I  *  F  D  C  *  Y  C  S  *  W  K  A  R  R  R  L  I  Q  S  V  C  P  T  K  I  R  R  T  L  :  V  *  D  A  R  P  T  C  F  *  N  S  S  P  D  G  C  A  F  *  D  L  Y  A  D  I  *  A  A  S  A  V  M  N  L  T  S  N  I  R  N  I  N  L  C  L  S  S  S  F  *  N  A  N  F  D  F  *  I  S  N  E  E  Y  S  T  R  *  G  I  V  I  F  A  I  Y  F  S  F  V  V  C  K  S  C  C  F  C  V  A  Y  A  *  D  Y  Y  Y  M  G  N  Y  E  N  S  S  F  G  F  I  H  L  L  F  F  L  P  F  V  G  I  Y  I  F  L  *  I  P  T  E  I  L  V  N  *  D  W  S  *  I  L  T  S  S  </first_frame>
            <second_frame>  I  V  S  A  L  C  F  F  F  F  F  F  S  S  F  L  Q  K  L  Y  P  E  R  *  F  S  S :   E  S  *  I  V  W  S  E  K  R  M  T  K  K  R  E  V  E  D  G  V  V  P  A  E  S  T  A  K  R  Q  K  V  M  D  Q  S  S  P  S  L  P  P  V  A  F  E  N  P  L  L  P  L  A  S  Y  D  D  D  E  D  D  E  D  D  G  T  K  G  H  I  P  E  Q  V  I  N  N  G  G  D  K  E  Q  N  G  Y  S  S  D  D  K  E  D  E  D  D  G  R  S  Q  G  K  R  N  R  A  I  E  I  R  R  D  C  P  Y  L  D  T  V  N  R  Q  :  V  L  D  F  D  F  E  K  F  C  S  V  S  L  T  N  L  N  V  Y  A  C  L  V  C  G  K  Y  F  Q  G  R  G  P  K  S  H  A  Y  T  H  S  L  E  A  G  H  H  V  F  I  N  L  R  T  E  K  V  Y  C  L  P  D  G  Y  E  V  I  D  P  S  L  D  D  I  I  H  V  L  N  P  R :   F  A  Q  E  Q  V  K  Q  L  D  K  S  R  Q  W  S  R  A  L  D  G  S  D  Y  L  P  G  T  :  V  G  L  N  N  I  K  E  T  D  F  V  N  V  T  I  Q  S  L  M  R  V  T  P  L  R  N  F  F  L  I  P  E  N  Y  Q  H  N  R  S  P  L  V  H  R  F  G  E  L  T  R  K  I  W  H  A  R  N  F  K  G  Q  :  V  S  P  H  E  F  L  Q  A  V  M  K  A  S  K  K  R  F  R  I  G  A  Q  S  D  P  V  E  F  M  S  W  L  L  N  T  L  H  T  E  L  R  S  S  K  K  G  S  S  I  I  H  R  C  F  Q  :  G  E  L  E  V  V  K  E  M  H  N  R  S  I  A  E  K  R  E  N  G  E  D  G  E  H  E  S  H  N  T  G  M  E  T  S  R  M  P  F  I  M  L  G  L  D  L  P  P  P  P  L  F  T  D  V  M  E  K  N  I  I  P  Q  :  V  P  L  F  N  I  L  K  K  F  D  G  D  T  V  T  E  V  V  R  P  R  I  A  R  M  G  Y  R  V  T  K  L  P  K  Y  L  I  L  H  M  R  R  F  T  K  N  N  F  F  M  E  K  N  P  T  L   : V  N  F  P  V  K  N  L  E  L  K  D  Y  I  P  L  P  A  P  K  E  N  E  K  L  R  S  K  Y  D  L  I  A  N  I  V  H  D  G  K  P  G  E  G  S  Y  R  V  F  V  Q  R  K  S  E  E  L  W :   Y  E  M  Q  D  L  H  V  S  E  T  L  P  Q  M  V  A  L  S  E  T  Y  M  Q  I  Y  E  Q  H  Q  Q  *  *  T  S  Q  V  T  S  E  T  S  T  S  A  S  P  L  L  F  E  M  P  I  S  T  F  R  Y  L  M  K  S  I  L  L  V  E  G  *  *  S  L  R  F  I  F  P  L  L  Y  V  N  P  A  V  F  V  L  L  M  L  K  I  T  I  T  W  G  I  M  R  T  L  A  L  D  L  S  T  C  Y  F  F  F  H  L  *  E  Y  I  S  S  Y  E  F  Q  L  K  F  *  *  I  K  I  G  V  R  F  *  L  L  Q </second_frame>
            <third_frame>   L  Y  R  L  F  A  S  S  S  S  S  S  R  A  F  C  K  N  C  I  Q  N  V  N  F  P   : V  N  L  K  *  F  G  V  R  R  E  *  Q  R  S  E  K  *  K  M  A  W  C  L  R  S  R  L  Q  N  G  R  R  *  W  I  S  R  L  P  L  F  H  Q  L  L  L  R  I  H  F  F  H  L  H  L  M  M  M  M  K  T  T  R  M  M  V  R  K  D  T  F  L  S  K  L  *  I  M  V  E  T  R  S  K  M  A  T  H  L  T  I  K  K  M  R  M  M  V  E  A  K  G  S  E  I  V  Q  L  R  L  G  G  T  A  P  I  L  I  L  *  T  D  R :   Y  W  I  L  T  S  R  N  F  V  R  S  L  L  Q  I  *  M  C  M  H  V  *  S  V  G  N  I  F  K  E  G  D  Q  N  L  M  R  I  H  T  V  L  K  Q  D  T  T  C  S  S  I  Y  E  Q  R  K  F  I  V  F  L  M  D  M  K  S  *  I  H  R  L  M  T  L  F  M  C  *  I  Q   : D  L  L  K  N  R  L  S  N  S  I  R  A  D  S  G  L  G  H  L  M  G  L  I  I  F  L  E  R :   L  G  *  I  T  S  R  R  L  I  L  S  M  S  R  F  S  H  *  C  E  *  L  P  *  E  T  S  F  L  S  L  R  I  I  N  T  I  D  L  L  L  F  I  D  L  E  S  L  P  E  R  F  G  T  Q  G  T  L  K  D  R :   S  V  R  M  S  S  C  K  R  L  *  K  L  V  K  N  V  F  G  *  V  P  S  L  T  L  L  N  L  C  H  G  S  *  I  P  F  T  R  S  L  E  V  P  K  K  A  V  A  *  S  I  G  A  F  R :   G  N  W  R  L  *  K  R  C  I  I  D  L  L  L  K  R  G  R  M  G  R  M  V  N  M  N  L  T  I  L  A  W  K  L  A  E  C  L  L  *  C  L  D  L  I  C  H  H  L  L  F  L  Q  M  S  W  K  R  I  L  F  P  R :   F  H  Y  S  T  Y  *  R  N  L  M  V  I  L  *  L  K  L  *  G  P  V  *  Q  G  W  D  T  V  *  Q  N  C  Q  S  I  *  F  S  T  C  V  G  L  Q  R  T  I  S  L  W  R  K  I  L  H  L  :  *  T  S  R  *  R  I  *  S  S  R  I  I  F  P  C  Q  H  Q  R  R  M  R  N  F  A  Q  N  M  I  *  L  L  I  L  F  M  M  E  S  Q  A  K  A  H  T  E  C  L  S  N  E  N  Q  K  N  F   : G  M  R  C  K  T  Y  M  F  L  K  L  F  P  R  W  L  R  F  L  R  L  I  C  R  Y  M  S  S  I  S  S  N  E  P  H  K  *  H  Q  K  H  Q  P  L  P  L  L  F  F  L  K  C  Q  F  R  L  L  D  I  *  *  R  V  F  Y  S  L  R  D  S  D  L  C  D  L  F  F  L  C  C  M  *  I  L  L  F  L  C  C  L  C  L  R  L  L  L  H  G  E  L  *  E  L  *  L  W  I  Y  P  L  A  I  F  S  S  I  C  R  N  I  Y  L  L  M  N  S  N  *  N  F  S  K  L  R  L  E  L  D  F  N  F  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0024K05.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47371" stop="47730"/>
                    <exon start="48203" stop="48447"/>
                    <exon start="48597" stop="48681"/>
                    <exon start="48775" stop="48960"/>
                    <exon start="49037" stop="49204"/>
                    <exon start="49294" stop="49485"/>
                    <exon start="50918" stop="51089"/>
                    <exon start="51875" stop="52046"/>
                    <exon start="52196" stop="52292"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1674</number_coding_nucleotides>
                  <number_encoded_amino_acids>558</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IVWSEKRMTKKREVEDGVVPAESTAKRQKVMDQSSPSLPPVAFENPLLPLASYDDDEDDEDDGTKGHIPEQVINNGGDKEQNGYSSDDKEDEDDGRSQGKRNRAIEIRRDCPYLDTVNRQVLDFDFEKFCSVSLTNLNVYACLVCGKYFQGRGPKSHAYTHSLEAGHHVFINLRTEKVYCLPDGYEVIDPSLDDIIHVLNPRFAQEQVKQLDKSRQWSRALDGSDYLPGTVGLNNIKETDFVNVTIQSLMRVTPLRNFFLIPENYQHNRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHTELRSSKKGSSIIHRCFQGELEVVKEMHNRSIAEKRENGEDGEHESHNTGMETSRMPFIMLGLDLPPPPLFTDVMEKNIIPQVPLFNILKKFDGDTVTEVVRPRIARMGYRVTKLPKYLILHMRRFTKNNFFMEKNPTLVNFPVKNLELKDYIPLPAPKENEKLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQDLHVSETLPQMVALSETYMQIYEQHQQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="49295" e_stop="49892"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="49295" e_stop="49892" e_length="598"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49295" stop="49892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587387" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGGAATTGGAGGTTGTGAAAGAGATGCATAATAGATCTATTGCTGAAAAGAGGGAGAATGGGGAGGATGGTGAACATGAATCTCACAATACTGGCATGGAAACTAGCAGAATGCCTTTTATAATGCTTGGACTTGATTTGCCACCACCTCCTCTTTTTACAGATGTCATGGAAAAGAATATTATTCCCCAGGTTCTTTTTTAAATTCAATTTTTTATTTGTGATTATCATTGGAAAGGTTTTGCCTTTTTTTCCCTAGTCGACAGTTTGTGGTGAGCGATGGTCATCGTATTGGAATTTTCCCATGTTGAATGTGTCATTGTACTAACTTTTGTACACATGCTGAAATACAAGTGTCTACATGTCAGCTAAGAAAAGGTGAGAGCGAGTTGTTCCTTGAGGAAAAAGTTGCACCTCTAGTTCTATACAAATGGTTACCTTTCTCAAAAGAAAAAAATTGCACCTAGTCTGAGACATAGTTTGCACTTGACTGTTCTTCACCAAGTTCATTTATCGAGTGTTATAGAGTTCAATTAGATTGTTGAGTTATCTGAGGCGAATGAAATCACTTAGATGTGCCAAAGTTTTGGTTTAATTGC</gDNA_template>
            <first_frame> G  N  W  R  L  *  K  R  C  I  I  D  L  L  L  K  R  G  R  M  G  R  M  V  N  M  N  L  T  I  L  A  W  K  L  A  E  C  L  L  *  C  L  D  L  I  C  H  H  L  L  F  L  Q  M  S  W  K  R  I  L  F  P  R  F  F  F  K  F  N  F  L  F  V  I  I  I  G  K  V  L  P  F  F  P  *  S  T  V  C  G  E  R  W  S  S  Y  W  N  F  P  M  L  N  V  S  L  Y  *  L  L  Y  T  C  *  N  T  S  V  Y  M  S  A  K  K  R  *  E  R  V  V  P  *  G  K  S  C  T  S  S  S  I  Q  M  V  T  F  L  K  R  K  K  L  H  L  V  *  D  I  V  C  T  *  L  F  F  T  K  F  I  Y  R  V  L  *  S  S  I  R  L  L  S  Y  L  R  R  M  K  S  L  R  C  A  K  V  L  V  *  L  </first_frame>
            <second_frame>  G  I  G  G  C  E  R  D  A  *  *  I  Y  C  *  K  E  G  E  W  G  G  W  *  T  *  I  S  Q  Y  W  H  G  N  *  Q  N  A  F  Y  N  A  W  T  *  F  A  T  T  S  S  F  Y  R  C  H  G  K  E  Y  Y  S  P  G  S  F  L  N  S  I  F  Y  L  *  L  S  L  E  R  F  C  L  F  F  P  S  R  Q  F  V  V  S  D  G  H  R  I  G  I  F  P  C  *  M  C  H  C  T  N  F  C  T  H  A  E  I  Q  V  S  T  C  Q  L  R  K  G  E  S  E  L  F  L  E  E  K  V  A  P  L  V  L  Y  K  W  L  P  F  S  K  E  K  N  C  T  *  S  E  T  *  F  A  L  D  C  S  S  P  S  S  F  I  E  C  Y  R  V  Q  L  D  C  *  V  I  *  G  E  *  N  H  L  D  V  P  K  F  W  F  N  C </second_frame>
            <third_frame>   E  L  E  V  V  K  E  M  H  N  R  S  I  A  E  K  R  E  N  G  E  D  G  E  H  E  S  H  N  T  G  M  E  T  S  R  M  P  F  I  M  L  G  L  D  L  P  P  P  P  L  F  T  D  V  M  E  K  N  I  I  P  Q  V  L  F  *  I  Q  F  F  I  C  D  Y  H  W  K  G  F  A  F  F  S  L  V  D  S  L  W  *  A  M  V  I  V  L  E  F  S  H  V  E  C  V  I  V  L  T  F  V  H  M  L  K  Y  K  C  L  H  V  S  *  E  K  V  R  A  S  C  S  L  R  K  K  L  H  L  *  F  Y  T  N  G  Y  L  S  Q  K  K  K  I  A  P  S  L  R  H  S  L  H  L  T  V  L  H  Q  V  H  L  S  S  V  I  E  F  N  *  I  V  E  L  S  E  A  N  E  I  T  *  M  C  Q  S  F  G  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0024K05.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="49297" stop="49497"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ELEVVKEMHNRSIAEKRENGEDGEHESHNTGMETSRMPFIMLGLDLPPPPLFTDVMEKNIIPQVLF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="56316" PGL_stop="56996"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="56316" e_stop="56996"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.971"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.971">
            <gDNA_exon_boundary e_start="56316" e_stop="56996" e_length="681"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56316" stop="56996"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U571892" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATGCATGCAACCCAAATAAATTTAAACCATGAATAATAACACTATCCCATATTCACCTACTCATGATATACAATACTATTATCAACAAGATTTTGCACTTGAAAATAATCCACATGAGTATTTTTCTGATTCCACCATCATAACCACAAATACTCAAAACATGACTATCGATCATCACCACCACCATCATCATCAGTTTTCTTCACGAATTTCTGAAAACGATGATATACACGAGTTAACAAGCCCTAAAACCACCACGATGAAACCAATTCGAAGGAGATCTAGATCATCCAAGAAAACACCTACAACGCTTGTAAACGCTAGCATCACGAATTTTCGAGCACTAGTGCAACAACATACTGGATGTCACACTTGTCCAACGTTCAAAAATAATCAAAAGGGTCCAATTAACCTAAGTTTTGGTCCACAAAATGATCAAAGTGAATTGCTTGGAAGTAATTCAATAGGAGAGGGCTCTATGAATTATGGTTACTATTATAATAATAATCATGAAGATCAAGATGAGAAATATTCAAAGGATAATTTACAACAAGAAAAACAAGAGAGTGGTTATAATAGTGTTAATTATGAAAATAGTAAGTTAAGTGTAGATGATTATGGATGGTAGTTGCCTAATTAGAATGTTGAAAAGGAATATTCTTTTTTTTCTAAGTACAAGAA</gDNA_template>
            <first_frame> M  H  A  T  Q  I  N  L  N  H  E  *  *  H  Y  P  I  F  T  Y  S  *  Y  T  I  L  L  S  T  R  F  C  T  *  K  *  S  T  *  V  F  F  *  F  H  H  H  N  H  K  Y  S  K  H  D  Y  R  S  S  P  P  P  S  S  S  V  F  F  T  N  F  *  K  R  *  Y  T  R  V  N  K  P  *  N  H  H  D  E  T  N  S  K  E  I  *  I  I  Q  E  N  T  Y  N  A  C  K  R  *  H  H  E  F  S  S  T  S  A  T  T  Y  W  M  S  H  L  S  N  V  Q  K  *  S  K  G  S  N  *  P  K  F  W  S  T  K  *  S  K  *  I  A  W  K  *  F  N  R  R  G  L  Y  E  L  W  L  L  L  *  *  *  S  *  R  S  R  *  E  I  F  K  G  *  F  T  T  R  K  T  R  E  W  L  *  *  C  *  L  *  K  *  *  V  K  C  R  *  L  W  M  V  V  A  *  L  E  C  *  K  G  I  F  F  F  F  *  V  Q  E </first_frame>
            <second_frame>  C  M  Q  P  K  *  I  *  T  M  N  N  N  T  I  P  Y  S  P  T  H  D  I  Q  Y  Y  Y  Q  Q  D  F  A  L  E  N  N  P  H  E  Y  F  S  D  S  T  I  I  T  T  N  T  Q  N  M  T  I  D  H  H  H  H  H  H  H  Q  F  S  S  R  I  S  E  N  D  D  I  H  E  L  T  S  P  K  T  T  T  M  K  P  I  R  R  R  S  R  S  S  K  K  T  P  T  T  L  V  N  A  S  I  T  N  F  R  A  L  V  Q  Q  H  T  G  C  H  T  C  P  T  F  K  N  N  Q  K  G  P  I  N  L  S  F  G  P  Q  N  D  Q  S  E  L  L  G  S  N  S  I  G  E  G  S  M  N  Y  G  Y  Y  Y  N  N  N  H  E  D  Q  D  E  K  Y  S  K  D  N  L  Q  Q  E  K  Q  E  S  G  Y  N  S  V  N  Y  E  N  S  K  L  S  V  D  D  Y  G  W  *  L  P  N  *  N  V  E  K  E  Y  S  F  F  S  K  Y  K   </second_frame>
            <third_frame>   A  C  N  P  N  K  F  K  P  *  I  I  T  L  S  H  I  H  L  L  M  I  Y  N  T  I  I  N  K  I  L  H  L  K  I  I  H  M  S  I  F  L  I  P  P  S  *  P  Q  I  L  K  T  *  L  S  I  I  T  T  T  I  I  I  S  F  L  H  E  F  L  K  T  M  I  Y  T  S  *  Q  A  L  K  P  P  R  *  N  Q  F  E  G  D  L  D  H  P  R  K  H  L  Q  R  L  *  T  L  A  S  R  I  F  E  H  *  C  N  N  I  L  D  V  T  L  V  Q  R  S  K  I  I  K  R  V  Q  L  T  *  V  L  V  H  K  M  I  K  V  N  C  L  E  V  I  Q  *  E  R  A  L  *  I  M  V  T  I  I  I  I  I  M  K  I  K  M  R  N  I  Q  R  I  I  Y  N  K  K  N  K  R  V  V  I  I  V  L  I  M  K  I  V  S  *  V  *  M  I  M  D  G  S  C  L  I  R  M  L  K  R  N  I  L  F  F  L  S  T  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0024K05.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="56341" stop="56943"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>600</number_coding_nucleotides>
                  <number_encoded_amino_acids>200</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMNNNTIPYSPTHDIQYYYQQDFALENNPHEYFSDSTIITTNTQNMTIDHHHHHHHQFSSRISENDDIHELTSPKTTTMKPIRRRSRSSKKTPTTLVNASITNFRALVQQHTGCHTCPTFKNNQKGPINLSFGPQNDQSELLGSNSIGEGSMNYGYYYNNNHEDQDEKYSKDNLQQEKQESGYNSVNYENSKLSVDDYGW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="74181" PGL_stop="66972"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74181" e_stop="74070"/>
            <exon e_start="73727" e_stop="73648"/>
            <exon e_start="72772" e_stop="72691"/>
            <exon e_start="70322" e_stop="70240"/>
            <exon e_start="69049" e_stop="68601"/>
            <exon e_start="67948" e_stop="67944"/>
            <exon e_start="66987" e_stop="66972"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.867" acc_prob="0.998" e_score="0.929"/>
          <exon-intron don_prob="1.000" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.869" acc_prob="0.923" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.826" e_score="0.998"/>
          <exon-intron don_prob="0.355" acc_prob="0.275" e_score="0.600"/>
          <exon-only e_score="0.812"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.929">
            <gDNA_exon_boundary e_start="74181" e_stop="74070" e_length="112"/>
          </exon>
          <intron i_serial="1" don_prob="0.867" acc_prob="0.998">
            <gDNA_intron_boundary i_start="74069" i_stop="73728" i_length="342"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="73727" e_stop="73648" e_length="80"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.977">
            <gDNA_intron_boundary i_start="73647" i_stop="72773" i_length="875"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="72772" e_stop="72691" e_length="82"/>
          </exon>
          <intron i_serial="3" don_prob="0.869" acc_prob="0.923">
            <gDNA_intron_boundary i_start="72690" i_stop="70323" i_length="2368"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="70322" e_stop="70240" e_length="83"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.991">
            <gDNA_intron_boundary i_start="70239" i_stop="69050" i_length="1190"/>
          </intron>
          <exon e_serial="5" e_score="0.998">
            <gDNA_exon_boundary e_start="69049" e_stop="68601" e_length="449"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.826">
            <gDNA_intron_boundary i_start="68600" i_stop="67949" i_length="652"/>
          </intron>
          <exon e_serial="6" e_score="0.600">
            <gDNA_exon_boundary e_start="67948" e_stop="67944" e_length="5"/>
          </exon>
          <intron i_serial="6" don_prob="0.355" acc_prob="0.275">
            <gDNA_intron_boundary i_start="67943" i_stop="66988" i_length="956"/>
          </intron>
          <exon e_serial="7" e_score="0.812">
            <gDNA_exon_boundary e_start="66987" e_stop="66972" e_length="16"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74181" stop="74070"/>
              <exon start="73727" stop="73648"/>
              <exon start="72772" stop="72691"/>
              <exon start="70322" stop="70240"/>
              <exon start="69049" stop="68601"/>
              <exon start="67948" stop="67944"/>
              <exon start="66987" stop="66972"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584714" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTACTCATCAGCGAACAGCAAATAGCCAAATATCATCAGTTTTTTTTCTTTCTTGTTTCTTCGATTCGTCTCTGTCGACCGATTGGATCCCTCAGAGCTAAAAACTTCGAA : AAGCCTTGCTTTCTTAGATGGCTAACCGAGCTCCTGTCAGAACTAACAACTCAGCCCTCATTGCCATGATCGCTGATGAG : GACACAATTACTGGATTTTTACTGGCTGGAGTTGGCAATGTTGATTTGAGGAGGAAAACAAATTACCTTATTGTGGATTCAA : AAACAACAGTGAAGCAGATTGAAGATGCTTTTAAGGAATTCACCACAAGAGAGGACATCGCAATAGTGTTGATCAGCCAATAT : GTGGCCAACATGATAAGATTTTTGGTTGATAGTTACAACAAACCAATTCCAGCCATTTTGGAGATTCCTTCAAAGGACCATCCATATGATCCTGCCCATGATTCTGTTCTATCACGAGTGAAGTATCTCTTCTCTACTGAATCAGTAGCTGGCGATAGGCGTTAATGTTGGAGTAATGTTTCTATGCCCCAACTATTTCATAATTATCTTGATATTGTATCATGTCCCCACTCTATCAAGAGATGATTCATTTTGTAATCTGTTTTAGATATTTAAGCGGTTTGTGTTGTTCTCGACTGTTGATTTTCAAGTTGTATAAGTTAAAAGTGACTGTGAATGAACAACTTGTTGCAAATAAGTCAGTTGCTCTGTTCTTTGGGAGGTTCAATTGATATTATGAATGATTATTCTTGAAGAGGAATCAAATAAACTATTTGAGGACTGCATCA : ATGAA : AAATGAAAAAAAACAA</gDNA_template>
            <first_frame> S  T  H  Q  R  T  A  N  S  Q  I  S  S  V  F  F  L  S  C  F  F  D  S  S  L  S  T  D  W  I  P  Q  S  *  K  L  R   : K  A  L  L  S  *  M  A  N  R  A  P  V  R  T  N  N  S  A  L  I  A  M  I  A  D  E  :  D  T  I  T  G  F  L  L  A  G  V  G  N  V  D  L  R  R  K  T  N  Y  L  I  V  D  S   : K  T  T  V  K  Q  I  E  D  A  F  K  E  F  T  T  R  E  D  I  A  I  V  L  I  S  Q  Y  :  V  A  N  M  I  R  F  L  V  D  S  Y  N  K  P  I  P  A  I  L  E  I  P  S  K  D  H  P  Y  D  P  A  H  D  S  V  L  S  R  V  K  Y  L  F  S  T  E  S  V  A  G  D  R  R  *  C  W  S  N  V  S  M  P  Q  L  F  H  N  Y  L  D  I  V  S  C  P  H  S  I  K  R  *  F  I  L  *  S  V  L  D  I  *  A  V  C  V  V  L  D  C  *  F  S  S  C  I  S  *  K  *  L  *  M  N  N  L  L  Q  I  S  Q  L  L  C  S  L  G  G  S  I  D  I  M  N  D  Y  S  *  R  G  I  K  *  T  I  *  G  L  H  Q :   *   : K  M  K  K  N   </first_frame>
            <second_frame>  L  L  I  S  E  Q  Q  I  A  K  Y  H  Q  F  F  F  F  L  V  S  S  I  R  L  C  R  P  I  G  S  L  R  A  K  N  F  E  :  K  P  C  F  L  R  W  L  T  E  L  L  S  E  L  T  T  Q  P  S  L  P  *  S  L  M  R :   T  Q  L  L  D  F  Y  W  L  E  L  A  M  L  I  *  G  G  K  Q  I  T  L  L  W  I  Q  :  K  Q  Q  *  S  R  L  K  M  L  L  R  N  S  P  Q  E  R  T  S  Q  *  C  *  S  A  N  M :   W  P  T  *  *  D  F  W  L  I  V  T  T  N  Q  F  Q  P  F  W  R  F  L  Q  R  T  I  H  M  I  L  P  M  I  L  F  Y  H  E  *  S  I  S  S  L  L  N  Q  *  L  A  I  G  V  N  V  G  V  M  F  L  C  P  N  Y  F  I  I  I  L  I  L  Y  H  V  P  T  L  S  R  D  D  S  F  C  N  L  F  *  I  F  K  R  F  V  L  F  S  T  V  D  F  Q  V  V  *  V  K  S  D  C  E  *  T  T  C  C  K  *  V  S  C  S  V  L  W  E  V  Q  L  I  L  *  M  I  I  L  E  E  E  S  N  K  L  F  E  D  C  I   : N  E  :  K  *  K  K  T  </second_frame>
            <third_frame>   Y  S  S  A  N  S  K  *  P  N  I  I  S  F  F  S  F  L  F  L  R  F  V  S  V  D  R  L  D  P  S  E  L  K  T  S  K :   S  L  A  F  L  D  G  *  P  S  S  C  Q  N  *  Q  L  S  P  H  C  H  D  R  *  *   : G  H  N  Y  W  I  F  T  G  W  S  W  Q  C  *  F  E  E  E  N  K  L  P  Y  C  G  F  K :   N  N  S  E  A  D  *  R  C  F  *  G  I  H  H  K  R  G  H  R  N  S  V  D  Q  P  I   : C  G  Q  H  D  K  I  F  G  *  *  L  Q  Q  T  N  S  S  H  F  G  D  S  F  K  G  P  S  I  *  S  C  P  *  F  C  S  I  T  S  E  V  S  L  L  Y  *  I  S  S  W  R  *  A  L  M  L  E  *  C  F  Y  A  P  T  I  S  *  L  S  *  Y  C  I  M  S  P  L  Y  Q  E  M  I  H  F  V  I  C  F  R  Y  L  S  G  L  C  C  S  R  L  L  I  F  K  L  Y  K  L  K  V  T  V  N  E  Q  L  V  A  N  K  S  V  A  L  F  F  G  R  F  N  *  Y  Y  E  *  L  F  L  K  R  N  Q  I  N  Y  L  R  T  A  S  :  M  K :   N  E  K  K  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0024K05.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73710" stop="73648"/>
                    <exon start="72772" stop="72691"/>
                    <exon start="70322" stop="70240"/>
                    <exon start="69049" stop="68885"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>390</number_coding_nucleotides>
                  <number_encoded_amino_acids>130</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MANRAPVRTNNSALIAMIADEDTITGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVLISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKYLFSTESVAGDRR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="67006" PGL_stop="67936"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67006" e_stop="67936"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="67006" e_stop="67936" e_length="931"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67006" stop="67936"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U578693" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATAATTATAAAACAAAAACAAAAACCATGCAAAACTCTTGTATCCCTCAAATAACAAAATCATCAACTTTAAACTGTGACACTACTACTACTACTACTACAAACTCTTTGTGTAGTCATGAGTTGAGTCCTAAAAATGGTAGCATAAAAAAGTCACCAATTCGAAGAAGATCTCGAGCATCAAAGAAAACTCCAACGACTCATCTCAATGCAGATGCATCGAATTTTCGAGCTCTAGTACAACAATTTACAGGATGTCATACTGCTAATACTTTTTTGGGAGCTCATAAAGGTCCAATAAACTTAAATTTTGGATTAGATGAGAATAGTGATGATTTTGAAGAAGATAACACAATAACTCATGTATCTTCATTTGGATATGATTGTTACAATTGCAATGATACTCAAAAGGAGAAGGGAGGTGTGTTTGTATCAGTAAATGAAAATAAAACATTTGGTTCATCGTCAACGACGAATTCTAGTAATAGTACAACGATGGATATAGGTGATTTTGAGTTGGAGAATTTGTGTTTAAGTGATTTTACTGGAGATGATCAGTTGATTACTGAAAGTATTTGGGATCATGATGGTTATCTTTTAATTTAGTGTCTTTTTGGAAGAAGAAAAGAAATGGAGTGATTTGGTTGAGGTTCAACACCTCAATTATTATTTTTTTAAAAATAGATTTTTTCTTTTCTTTTCTTCTATTTGATATCATGTATATATTTAATGTTATCTTAATTGATGTCATTATTATAAAATTGTGATCATATCTTGTGCCTTGTCGATAGATGTTTTTATTACAGTTGTAATCTCTAAAGAATGAGAACTCATATTTTGTATGTCATTAGTCCGATCCTTTGTAGGAACTACATGTAATAACGAACTTACAAAATGAATTTGTTTATCATAAAGAGATTCATCGTTCCTG</gDNA_template>
            <first_frame> H  N  Y  K  T  K  T  K  T  M  Q  N  S  C  I  P  Q  I  T  K  S  S  T  L  N  C  D  T  T  T  T  T  T  T  N  S  L  C  S  H  E  L  S  P  K  N  G  S  I  K  K  S  P  I  R  R  R  S  R  A  S  K  K  T  P  T  T  H  L  N  A  D  A  S  N  F  R  A  L  V  Q  Q  F  T  G  C  H  T  A  N  T  F  L  G  A  H  K  G  P  I  N  L  N  F  G  L  D  E  N  S  D  D  F  E  E  D  N  T  I  T  H  V  S  S  F  G  Y  D  C  Y  N  C  N  D  T  Q  K  E  K  G  G  V  F  V  S  V  N  E  N  K  T  F  G  S  S  S  T  T  N  S  S  N  S  T  T  M  D  I  G  D  F  E  L  E  N  L  C  L  S  D  F  T  G  D  D  Q  L  I  T  E  S  I  W  D  H  D  G  Y  L  L  I  *  C  L  F  G  R  R  K  E  M  E  *  F  G  *  G  S  T  P  Q  L  L  F  F  *  K  *  I  F  S  F  L  F  F  Y  L  I  S  C  I  Y  L  M  L  S  *  L  M  S  L  L  *  N  C  D  H  I  L  C  L  V  D  R  C  F  Y  Y  S  C  N  L  *  R  M  R  T  H  I  L  Y  V  I  S  P  I  L  C  R  N  Y  M  *  *  R  T  Y  K  M  N  L  F  I  I  K  R  F  I  V  P  </first_frame>
            <second_frame>  I  I  I  K  Q  K  Q  K  P  C  K  T  L  V  S  L  K  *  Q  N  H  Q  L  *  T  V  T  L  L  L  L  L  L  Q  T  L  C  V  V  M  S  *  V  L  K  M  V  A  *  K  S  H  Q  F  E  E  D  L  E  H  Q  R  K  L  Q  R  L  I  S  M  Q  M  H  R  I  F  E  L  *  Y  N  N  L  Q  D  V  I  L  L  I  L  F  W  E  L  I  K  V  Q  *  T  *  I  L  D  *  M  R  I  V  M  I  L  K  K  I  T  Q  *  L  M  Y  L  H  L  D  M  I  V  T  I  A  M  I  L  K  R  R  R  E  V  C  L  Y  Q  *  M  K  I  K  H  L  V  H  R  Q  R  R  I  L  V  I  V  Q  R  W  I  *  V  I  L  S  W  R  I  C  V  *  V  I  L  L  E  M  I  S  *  L  L  K  V  F  G  I  M  M  V  I  F  *  F  S  V  F  L  E  E  E  K  K  W  S  D  L  V  E  V  Q  H  L  N  Y  Y  F  F  K  N  R  F  F  L  F  F  S  S  I  *  Y  H  V  Y  I  *  C  Y  L  N  *  C  H  Y  Y  K  I  V  I  I  S  C  A  L  S  I  D  V  F  I  T  V  V  I  S  K  E  *  E  L  I  F  C  M  S  L  V  R  S  F  V  G  T  T  C  N  N  E  L  T  K  *  I  C  L  S  *  R  D  S  S  F  L </second_frame>
            <third_frame>   *  L  *  N  K  N  K  N  H  A  K  L  L  Y  P  S  N  N  K  I  I  N  F  K  L  *  H  Y  Y  Y  Y  Y  Y  K  L  F  V  *  S  *  V  E  S  *  K  W  *  H  K  K  V  T  N  S  K  K  I  S  S  I  K  E  N  S  N  D  S  S  Q  C  R  C  I  E  F  S  S  S  S  T  T  I  Y  R  M  S  Y  C  *  Y  F  F  G  S  S  *  R  S  N  K  L  K  F  W  I  R  *  E  *  *  *  F  *  R  R  *  H  N  N  S  C  I  F  I  W  I  *  L  L  Q  L  Q  *  Y  S  K  G  E  G  R  C  V  C  I  S  K  *  K  *  N  I  W  F  I  V  N  D  E  F  *  *  *  Y  N  D  G  Y  R  *  F  *  V  G  E  F  V  F  K  *  F  Y  W  R  *  S  V  D  Y  *  K  Y  L  G  S  *  W  L  S  F  N  L  V  S  F  W  K  K  K  R  N  G  V  I  W  L  R  F  N  T  S  I  I  I  F  L  K  I  D  F  F  F  S  F  L  L  F  D  I  M  Y  I  F  N  V  I  L  I  D  V  I  I  I  K  L  *  S  Y  L  V  P  C  R  *  M  F  L  L  Q  L  *  S  L  K  N  E  N  S  Y  F  V  C  H  *  S  D  P  L  *  E  L  H  V  I  T  N  L  Q  N  E  F  V  Y  H  K  E  I  H  R  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0024K05.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67006" stop="67611"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>603</number_coding_nucleotides>
                  <number_encoded_amino_acids>201</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HNYKTKTKTMQNSCIPQITKSSTLNCDTTTTTTTNSLCSHELSPKNGSIKKSPIRRRSRASKKTPTTHLNADASNFRALVQQFTGCHTANTFLGAHKGPINLNFGLDENSDDFEEDNTITHVSSFGYDCYNCNDTQKEKGGVFVSVNENKTFGSSSTTNSSNSTTMDIGDFELENLCLSDFTGDDQLITESIWDHDGYLLI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="74838" PGL_stop="78526"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74838" e_stop="74997"/>
            <exon e_start="77535" e_stop="77603"/>
            <exon e_start="77706" e_stop="77812"/>
            <exon e_start="77895" e_stop="78526"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.017" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.902" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.882" e_score="0.991"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="74838" e_stop="74997" e_length="160"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.017">
            <gDNA_intron_boundary i_start="74998" i_stop="77534" i_length="2537"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="77535" e_stop="77603" e_length="69"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.902">
            <gDNA_intron_boundary i_start="77604" i_stop="77705" i_length="102"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="77706" e_stop="77812" e_length="107"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.882">
            <gDNA_intron_boundary i_start="77813" i_stop="77894" i_length="82"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="77895" e_stop="78526" e_length="632"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74838" stop="74997"/>
              <exon start="77535" stop="77603"/>
              <exon start="77706" stop="77812"/>
              <exon start="77895" stop="78526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573442" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAACCACCATTCATTTGTTGATTGATGATGTTGATGTGCAAAGGGGTATGGCCAAGCAGCTCATCCGTTGTTCTGTTGCAGACACCAAATGGACACAAATCCTTCAAAACCCAAGCTAGCTTTTCTAGCTACCCTCTTGCCAGCAAAGTTATGGTTAGAA : ATCTATCATACTCCACTGATGAAAGTTGTCTGGAGAAAATATTTTCAAATTTTGGTCATGTTGCTGAAG : TTAAGATTGTGAAGGATGAAGTGACTAAGAGATCAAAGGGATATGCTTTTATTCAGTACACTTCTCAAGAAAATGCCATGCTTGCTCTTGATAGCATGGATCACAAG : TACATCAATGGCAGGGTTATATTTGTGGAACTTGCAAAGCCTACAAAGAAAGACTTTGGCAGATACCCGAGAAGTTGTGGACCACCTGTGGAGAGATTACCATCTGAAAATGAAGTTCCAGACCTAAAAGAAAACTGCTAAGGTAATGTTTACGCTAGTGTTAGAGTGGCAATCATTGATAGGTGCATGACAGTTCCACAAGTCATCATTCTTGAAACTACTGTGATGCAGCTTTGGTTCGACTTGATAAAACTTCTATTGCGTAAAATTTCACTCTTAGGTCACTCCTACAGGTTACAGGACTAGTTTACTTGTTCTGTCATCGCATTCTGTGTTTTGCATGTAAACTTCACACACATATATATTGTGTTTGTTCTATTAGGCATGGCGCGTTGCATGTCAGTCCAGGTCAATTACTTCATACTAGAAGAGGCTAAGTGTACTTCCGGTCATCTTTCAAAATCTGTACTTAGAATCATGTATATTAAATCGCAAGACTTGTGCTTTCTCAACTTGATGTAACTAGTTTGATGGTCAGGTTCTGCTACTGTATATGTATTTTTAGCTTTTACGCGGTGAAAATGGACTATCATGATGTACTTTAGGCTGCTGCCAAGGGTCTGGAAGTTGCC</gDNA_template>
            <first_frame> K  P  P  F  I  C  *  L  M  M  L  M  C  K  G  V  W  P  S  S  S  S  V  V  L  L  Q  T  P  N  G  H  K  S  F  K  T  Q  A  S  F  S  S  Y  P  L  A  S  K  V  M  V  R   : N  L  S  Y  S  T  D  E  S  C  L  E  K  I  F  S  N  F  G  H  V  A  E   : V  K  I  V  K  D  E  V  T  K  R  S  K  G  Y  A  F  I  Q  Y  T  S  Q  E  N  A  M  L  A  L  D  S  M  D  H  K  :  Y  I  N  G  R  V  I  F  V  E  L  A  K  P  T  K  K  D  F  G  R  Y  P  R  S  C  G  P  P  V  E  R  L  P  S  E  N  E  V  P  D  L  K  E  N  C  *  G  N  V  Y  A  S  V  R  V  A  I  I  D  R  C  M  T  V  P  Q  V  I  I  L  E  T  T  V  M  Q  L  W  F  D  L  I  K  L  L  L  R  K  I  S  L  L  G  H  S  Y  R  L  Q  D  *  F  T  C  S  V  I  A  F  C  V  L  H  V  N  F  T  H  I  Y  I  V  F  V  L  L  G  M  A  R  C  M  S  V  Q  V  N  Y  F  I  L  E  E  A  K  C  T  S  G  H  L  S  K  S  V  L  R  I  M  Y  I  K  S  Q  D  L  C  F  L  N  L  M  *  L  V  *  W  S  G  S  A  T  V  Y  V  F  L  A  F  T  R  *  K  W  T  I  M  M  Y  F  R  L  L  P  R  V  W  K  L   </first_frame>
            <second_frame>  N  H  H  S  F  V  D  *  *  C  *  C  A  K  G  Y  G  Q  A  A  H  P  L  F  C  C  R  H  Q  M  D  T  N  P  S  K  P  K  L  A  F  L  A  T  L  L  P  A  K  L  W  L  E  :  I  Y  H  T  P  L  M  K  V  V  W  R  K  Y  F  Q  I  L  V  M  L  L  K  :  L  R  L  *  R  M  K  *  L  R  D  Q  R  D  M  L  L  F  S  T  L  L  K  K  M  P  C  L  L  L  I  A  W  I  T  S :   T  S  M  A  G  L  Y  L  W  N  L  Q  S  L  Q  R  K  T  L  A  D  T  R  E  V  V  D  H  L  W  R  D  Y  H  L  K  M  K  F  Q  T  *  K  K  T  A  K  V  M  F  T  L  V  L  E  W  Q  S  L  I  G  A  *  Q  F  H  K  S  S  F  L  K  L  L  *  C  S  F  G  S  T  *  *  N  F  Y  C  V  K  F  H  S  *  V  T  P  T  G  Y  R  T  S  L  L  V  L  S  S  H  S  V  F  C  M  *  T  S  H  T  Y  I  L  C  L  F  Y  *  A  W  R  V  A  C  Q  S  R  S  I  T  S  Y  *  K  R  L  S  V  L  P  V  I  F  Q  N  L  Y  L  E  S  C  I  L  N  R  K  T  C  A  F  S  T  *  C  N  *  F  D  G  Q  V  L  L  L  Y  M  Y  F  *  L  L  R  G  E  N  G  L  S  *  C  T  L  G  C  C  Q  G  S  G  S  C  </second_frame>
            <third_frame>   T  T  I  H  L  L  I  D  D  V  D  V  Q  R  G  M  A  K  Q  L  I  R  C  S  V  A  D  T  K  W  T  Q  I  L  Q  N  P  S  *  L  F  *  L  P  S  C  Q  Q  S  Y  G  *  K :   S  I  I  L  H  *  *  K  L  S  G  E  N  I  F  K  F  W  S  C  C  *  S :   *  D  C  E  G  *  S  D  *  E  I  K  G  I  C  F  Y  S  V  H  F  S  R  K  C  H  A  C  S  *  *  H  G  S  Q   : V  H  Q  W  Q  G  Y  I  C  G  T  C  K  A  Y  K  E  R  L  W  Q  I  P  E  K  L  W  T  T  C  G  E  I  T  I  *  K  *  S  S  R  P  K  R  K  L  L  R  *  C  L  R  *  C  *  S  G  N  H  *  *  V  H  D  S  S  T  S  H  H  S  *  N  Y  C  D  A  A  L  V  R  L  D  K  T  S  I  A  *  N  F  T  L  R  S  L  L  Q  V  T  G  L  V  Y  L  F  C  H  R  I  L  C  F  A  C  K  L  H  T  H  I  Y  C  V  C  S  I  R  H  G  A  L  H  V  S  P  G  Q  L  L  H  T  R  R  G  *  V  Y  F  R  S  S  F  K  I  C  T  *  N  H  V  Y  *  I  A  R  L  V  L  S  Q  L  D  V  T  S  L  M  V  R  F  C  Y  C  I  C  I  F  S  F  Y  A  V  K  M  D  Y  H  D  V  L  *  A  A  A  K  G  L  E  V  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0024K05.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74859" stop="74997"/>
                    <exon start="77535" stop="77603"/>
                    <exon start="77706" stop="77812"/>
                    <exon start="77895" stop="78035"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>453</number_coding_nucleotides>
                  <number_encoded_amino_acids>151</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LMMLMCKGVWPSSSSVVLLQTPNGHKSFKTQASFSSYPLASKVMVRNLSYSTDESCLEKIFSNFGHVAEVKIVKDEVTKRSKGYAFIQYTSQENAMLALDSMDHKYINGRVIFVELAKPTKKDFGRYPRSCGPPVERLPSENEVPDLKENC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0024K05.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78201" stop="78416"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FTCSVIAFCVLHVNFTHIYIVFVLLGMARCMSVQVNYFILEEAKCTSGHLSKSVLRIMYIKSQDLCFLNLM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="75727" e_stop="76216"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="75727" e_stop="76216" e_length="490"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75727" stop="76216"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U586894" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGCATCAGATTGAAAGTTTACAGCTTGAATCAATAATACGGTGTCTACTATCTATGTGTAGTGTGGATGATAGTTTTTGAACTTGTCTTCGTTATATGTTTCATCCATGTCCTATAAAAGCTAAACTTTTAAGACTTTTTGAAGCTTGGATACAACATCTGTTGGTCATAGCTGAAAAACTCTATTGACTTTGTAGTATCTTTTCCAAGAAACGGTGGGCGGAACTTAAATCAAAGAGAGAATTAAGTTTGTTTAGGATCTCTATTGGTGGAATTTGTTGTCGTCTGGGTACTGCTTGACACTAGTAATGTACAACCCACATTGCTTGCTTGTTATTCTGATCAAATAGTGATGTAGTAACTAGTGATAAGCTATGTTGCTTGAACTCTTCAAAAATGTTGACAGCTGCGTGTCCGATTCTCCAAAAATAGTGTATTTTTGAAGAATCCGACACGGATGTTGCATCAAAAGCAAAGAGTTCCGGAAACT</gDNA_template>
            <first_frame> *  H  Q  I  E  S  L  Q  L  E  S  I  I  R  C  L  L  S  M  C  S  V  D  D  S  F  *  T  C  L  R  Y  M  F  H  P  C  P  I  K  A  K  L  L  R  L  F  E  A  W  I  Q  H  L  L  V  I  A  E  K  L  Y  *  L  C  S  I  F  S  K  K  R  W  A  E  L  K  S  K  R  E  L  S  L  F  R  I  S  I  G  G  I  C  C  R  L  G  T  A  *  H  *  *  C  T  T  H  I  A  C  L  L  F  *  S  N  S  D  V  V  T  S  D  K  L  C  C  L  N  S  S  K  M  L  T  A  A  C  P  I  L  Q  K  *  C  I  F  E  E  S  D  T  D  V  A  S  K  A  K  S  S  G  N  </first_frame>
            <second_frame>  S  I  R  L  K  V  Y  S  L  N  Q  *  Y  G  V  Y  Y  L  C  V  V  W  M  I  V  F  E  L  V  F  V  I  C  F  I  H  V  L  *  K  L  N  F  *  D  F  L  K  L  G  Y  N  I  C  W  S  *  L  K  N  S  I  D  F  V  V  S  F  P  R  N  G  G  R  N  L  N  Q  R  E  N  *  V  C  L  G  S  L  L  V  E  F  V  V  V  W  V  L  L  D  T  S  N  V  Q  P  T  L  L  A  C  Y  S  D  Q  I  V  M  *  *  L  V  I  S  Y  V  A  *  T  L  Q  K  C  *  Q  L  R  V  R  F  S  K  N  S  V  F  L  K  N  P  T  R  M  L  H  Q  K  Q  R  V  P  E  T </second_frame>
            <third_frame>   A  S  D  *  K  F  T  A  *  I  N  N  T  V  S  T  I  Y  V  *  C  G  *  *  F  L  N  L  S  S  L  Y  V  S  S  M  S  Y  K  S  *  T  F  K  T  F  *  S  L  D  T  T  S  V  G  H  S  *  K  T  L  L  T  L  *  Y  L  F  Q  E  T  V  G  G  T  *  I  K  E  R  I  K  F  V  *  D  L  Y  W  W  N  L  L  S  S  G  Y  C  L  T  L  V  M  Y  N  P  H  C  L  L  V  I  L  I  K  *  *  C  S  N  *  *  *  A  M  L  L  E  L  F  K  N  V  D  S  C  V  S  D  S  P  K  I  V  Y  F  *  R  I  R  H  G  C  C  I  K  S  K  E  F  R  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0024K05.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="82208" PGL_stop="89277"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82208" e_stop="82544"/>
            <exon e_start="82906" e_stop="83019"/>
            <exon e_start="84959" e_stop="85054"/>
            <exon e_start="85320" e_stop="85362"/>
            <exon e_start="85657" e_stop="85812"/>
            <exon e_start="86096" e_stop="86176"/>
            <exon e_start="88667" e_stop="88765"/>
            <exon e_start="88916" e_stop="89277"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.984" e_score="0.994"/>
          <exon-intron don_prob="0.913" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.719" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.922" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.264" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="82208" e_stop="82544" e_length="337"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.984">
            <gDNA_intron_boundary i_start="82545" i_stop="82905" i_length="361"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="82906" e_stop="83019" e_length="114"/>
          </exon>
          <intron i_serial="2" don_prob="0.913" acc_prob="1.000">
            <gDNA_intron_boundary i_start="83020" i_stop="84958" i_length="1939"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="84959" e_stop="85054" e_length="96"/>
          </exon>
          <intron i_serial="3" don_prob="0.719" acc_prob="0.966">
            <gDNA_intron_boundary i_start="85055" i_stop="85319" i_length="265"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="85320" e_stop="85362" e_length="43"/>
          </exon>
          <intron i_serial="4" don_prob="0.922" acc_prob="0.995">
            <gDNA_intron_boundary i_start="85363" i_stop="85656" i_length="294"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="85657" e_stop="85812" e_length="156"/>
          </exon>
          <intron i_serial="5" don_prob="0.971" acc_prob="0.988">
            <gDNA_intron_boundary i_start="85813" i_stop="86095" i_length="283"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="86096" e_stop="86176" e_length="81"/>
          </exon>
          <intron i_serial="6" don_prob="0.996" acc_prob="0.264">
            <gDNA_intron_boundary i_start="86177" i_stop="88666" i_length="2490"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="88667" e_stop="88765" e_length="99"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.987">
            <gDNA_intron_boundary i_start="88766" i_stop="88915" i_length="150"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="88916" e_stop="89277" e_length="362"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82208" stop="82544"/>
              <exon start="82906" stop="83019"/>
              <exon start="84959" stop="85054"/>
              <exon start="85320" stop="85362"/>
              <exon start="85657" stop="85812"/>
              <exon start="86096" stop="86176"/>
              <exon start="88667" stop="88765"/>
              <exon start="88916" stop="89277"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568336" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGCAGAGGAGTGATGGGTGTGGGGTGGAGAAGAAACAAAAGAGGTTAAATATAAGAAGACTTTTTTTTTTAAAAAAAAAATTACAATTTAAGCGTTACAATTGTATTTGGAGAAGAGAGAGAGAAGAGAGAAGGGCGATAATACTATAGTAATGGAGAATGGAGGAGGAGGAGGAGAAGATCCACAATTAGAACCACCACCACAGCCGCAGCGACGGTTGAAGCCGATCCCACCGAATCCACCGCCAACAGATCGGCCGGCTCGTATTTACGCCGACGGAATCTACGATCTCTTTCACTTCGGACATGCTCGCGCCCTCGAACAAGCTAAGAAACT : ATTGCCTAACGCTCAGCTTCTTGTTGGATGCTGCAATGATGAAATCACTCACAAATTCAAGGGAAAAACTGTTATGAATGAAAAGGAGCGATATGAATCTTTGCGCCACTGCAG : ATGGGTTGATGAAGTTATTCCAGATGCGCCTTGGGTTGTAACCCCAGAGTTCATTGAGAAACATCGGATTGACTATGTGGCACATGACGCTCTTCC : TTATGCGGATGCAAGTGGAGCTGGAAATGATGTTTACGAGTAT : GTTAAGTCCATTGGTAAGTTCTTGGAGACCAAGCGGACTGATGGAATATCTACTTCAGATTTAATAATGAGGATTGTAAAAGACTACAATGAATATGTGATGCGCAATTTGGACAGAGGATATTCAAGAACGGATCTTGGTCTGAGCTACGTGAAG : GAAAAAAGGCTGAGAGTGAACAGGGGTTTGAAAAAGTTGCATGAGAGAGTAAAGAAACAACAAGAGAAAGTGGAAGAGAAG : ATACAAACAGTAGCAAAGCATCGAAATATTTGGGTGGAGAATGCTGATAGATTGGTTGCTGGTTTCCTTGAGATGTTTGAAGAGGGTTGCCACAAAATG : GGAACTGTCATAAGAGACCGAATTCAAGAACAGATGAGGACCAAGAGTATAAAAGGGCTTCTATATGACAAAGAAGAGGATGATGATGAATATGACTACTATTACGGGAGCAGTGACGATGATGAAGAATACTACGATGGTGAAGATGAAGAATAGGGTTGTTCACTTTCTCATGTTATGTGGTGATGTAAAATGTAGTTTATGGATCAAGTTGGATGAAGATGTATTATGTCCTAACGTTTGGATGCGCGTGTGATATGCGTGTTTTATTTTGGTAGAATGTAGTGGCAATTAGTTGTGTTGTAAACCGTGATCAAGCATAGTCTTGTACCATAACGCTGTCAATCAGAGTGATTTGTCTA</gDNA_template>
            <first_frame> W  Q  R  S  D  G  C  G  V  E  K  K  Q  K  R  L  N  I  R  R  L  F  F  L  K  K  K  L  Q  F  K  R  Y  N  C  I  W  R  R  E  R  E  E  R  R  A  I  I  L  *  *  W  R  M  E  E  E  E  E  K  I  H  N  *  N  H  H  H  S  R  S  D  G  *  S  R  S  H  R  I  H  R  Q  Q  I  G  R  L  V  F  T  P  T  E  S  T  I  S  F  T  S  D  M  L  A  P  S  N  K  L  R  N   : Y  C  L  T  L  S  F  L  L  D  A  A  M  M  K  S  L  T  N  S  R  E  K  L  L  *  M  K  R  S  D  M  N  L  C  A  T  A   : D  G  L  M  K  L  F  Q  M  R  L  G  L  *  P  Q  S  S  L  R  N  I  G  L  T  M  W  H  M  T  L  F   : L  M  R  M  Q  V  E  L  E  M  M  F  T  S  M :   L  S  P  L  V  S  S  W  R  P  S  G  L  M  E  Y  L  L  Q  I  *  *  *  G  L  *  K  T  T  M  N  M  *  C  A  I  W  T  E  D  I  Q  E  R  I  L  V  *  A  T  *  R :   K  K  G  *  E  *  T  G  V  *  K  S  C  M  R  E  *  R  N  N  K  R  K  W  K  R  R :   Y  K  Q  *  Q  S  I  E  I  F  G  W  R  M  L  I  D  W  L  L  V  S  L  R  C  L  K  R  V  A  T  K  W :   E  L  S  *  E  T  E  F  K  N  R  *  G  P  R  V  *  K  G  F  Y  M  T  K  K  R  M  M  M  N  M  T  T  I  T  G  A  V  T  M  M  K  N  T  T  M  V  K  M  K  N  R  V  V  H  F  L  M  L  C  G  D  V  K  C  S  L  W  I  K  L  D  E  D  V  L  C  P  N  V  W  M  R  V  *  Y  A  C  F  I  L  V  E  C  S  G  N  *  L  C  C  K  P  *  S  S  I  V  L  Y  H  N  A  V  N  Q  S  D  L  S  </first_frame>
            <second_frame>  G  R  G  V  M  G  V  G  W  R  R  N  K  R  G  *  I  *  E  D  F  F  F  *  K  K  N  Y  N  L  S  V  T  I  V  F  G  E  E  R  E  K  R  E  G  R  *  Y  Y  S  N  G  E  W  R  R  R  R  R  R  S  T  I  R  T  T  T  T  A  A  A  T  V  E  A  D  P  T  E  S  T  A  N  R  S  A  G  S  Y  L  R  R  R  N  L  R  S  L  S  L  R  T  C  S  R  P  R  T  S  *  E  T  :  I  A  *  R  S  A  S  C  W  M  L  Q  *  *  N  H  S  Q  I  Q  G  K  N  C  Y  E  *  K  G  A  I  *  I  F  A  P  L  Q  :  M  G  *  *  S  Y  S  R  C  A  L  G  C  N  P  R  V  H  *  E  T  S  D  *  L  C  G  T  *  R  S  S  :  L  C  G  C  K  W  S  W  K  *  C  L  R  V   : C  *  V  H  W  *  V  L  G  D  Q  A  D  *  W  N  I  Y  F  R  F  N  N  E  D  C  K  R  L  Q  *  I  C  D  A  Q  F  G  Q  R  I  F  K  N  G  S  W  S  E  L  R  E   : G  K  K  A  E  S  E  Q  G  F  E  K  V  A  *  E  S  K  E  T  T  R  E  S  G  R  E   : D  T  N  S  S  K  A  S  K  Y  L  G  G  E  C  *  *  I  G  C  W  F  P  *  D  V  *  R  G  L  P  Q  N   : G  N  C  H  K  R  P  N  S  R  T  D  E  D  Q  E  Y  K  R  A  S  I  *  Q  R  R  G  *  *  *  I  *  L  L  L  R  E  Q  *  R  *  *  R  I  L  R  W  *  R  *  R  I  G  L  F  T  F  S  C  Y  V  V  M  *  N  V  V  Y  G  S  S  W  M  K  M  Y  Y  V  L  T  F  G  C  A  C  D  M  R  V  L  F  W  *  N  V  V  A  I  S  C  V  V  N  R  D  Q  A  *  S  C  T  I  T  L  S  I  R  V  I  C  L </second_frame>
            <third_frame>   A  E  E  *  W  V  W  G  G  E  E  T  K  E  V  K  Y  K  K  T  F  F  F  K  K  K  I  T  I  *  A  L  Q  L  Y  L  E  K  R  E  R  R  E  K  G  D  N  T  I  V  M  E  N  G  G  G  G  G  E  D  P  Q  L  E  P  P  P  Q  P  Q  R  R  L  K  P  I  P  P  N  P  P  P  T  D  R  P  A  R  I  Y  A  D  G  I  Y  D  L  F  H  F  G  H  A  R  A  L  E  Q  A  K  K  L :   L  P  N  A  Q  L  L  V  G  C  C  N  D  E  I  T  H  K  F  K  G  K  T  V  M  N  E  K  E  R  Y  E  S  L  R  H  C  R :   W  V  D  E  V  I  P  D  A  P  W  V  V  T  P  E  F  I  E  K  H  R  I  D  Y  V  A  H  D  A  L  P :   Y  A  D  A  S  G  A  G  N  D  V  Y  E  Y  :  V  K  S  I  G  K  F  L  E  T  K  R  T  D  G  I  S  T  S  D  L  I  M  R  I  V  K  D  Y  N  E  Y  V  M  R  N  L  D  R  G  Y  S  R  T  D  L  G  L  S  Y  V  K  :  E  K  R  L  R  V  N  R  G  L  K  K  L  H  E  R  V  K  K  Q  Q  E  K  V  E  E  K  :  I  Q  T  V  A  K  H  R  N  I  W  V  E  N  A  D  R  L  V  A  G  F  L  E  M  F  E  E  G  C  H  K  M  :  G  T  V  I  R  D  R  I  Q  E  Q  M  R  T  K  S  I  K  G  L  L  Y  D  K  E  E  D  D  D  E  Y  D  Y  Y  Y  G  S  S  D  D  D  E  E  Y  Y  D  G  E  D  E  E  *  G  C  S  L  S  H  V  M  W  *  C  K  M  *  F  M  D  Q  V  G  *  R  C  I  M  S  *  R  L  D  A  R  V  I  C  V  F  Y  F  G  R  M  *  W  Q  L  V  V  L  *  T  V  I  K  H  S  L  V  P  *  R  C  Q  S  E  *  F  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0024K05.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82300" stop="82544"/>
                    <exon start="82906" stop="83019"/>
                    <exon start="84959" stop="85054"/>
                    <exon start="85320" stop="85362"/>
                    <exon start="85657" stop="85812"/>
                    <exon start="86096" stop="86176"/>
                    <exon start="88667" stop="88765"/>
                    <exon start="88916" stop="89071"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>987</number_coding_nucleotides>
                  <number_encoded_amino_acids>329</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ALQLYLEKRERREKGDNTIVMENGGGGGEDPQLEPPPQPQRRLKPIPPNPPPTDRPARIYADGIYDLFHFGHARALEQAKKLLPNAQLLVGCCNDEITHKFKGKTVMNEKERYESLRHCRWVDEVIPDAPWVVTPEFIEKHRIDYVAHDALPYADASGAGNDVYEYVKSIGKFLETKRTDGISTSDLIMRIVKDYNEYVMRNLDRGYSRTDLGLSYVKEKRLRVNRGLKKLHERVKKQQEKVEEKIQTVAKHRNIWVENADRLVAGFLEMFEEGCHKMGTVIRDRIQEQMRTKSIKGLLYDKEEDDDEYDYYYGSSDDDEEYYDGEDEE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="83689" e_stop="84403"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="83689" e_stop="84403" e_length="715"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83689" stop="84403"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603534" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCCTTCTGCTATGTAATATAGATAACAATTTAAATTGGGAAGTGTACCAACATTTAATTCTGGGAAGACAAATGGTTAGGGGGATCTACCCTAAAGAATGAATTTCCAAGCTTGTATCAGATAGCTCAGAACATAACTTTACCATCTCTCAGAATTGGCAAAATAACTGCTGGCAAATACAGTTCAGGAGGAATATTTAAGATTGGGAACTGCCTCACCTTATAGAGGTATGGCCTAAATTAGAACACTCTTGTCAAGTCATGTATTACTGACAACCTAAAATGGAAGGATGGTCCCTATTCAGTATCGGGAGGCTTTGCTCATCTATGCTCTCCTACAATGAGGTAATTGATAGATGGCTCTGGAAATTAAAGCTTCTCTCAAGATCATATGTTCTAGCTGGACAGCTTTACATGAAGCATGCCTTGCATAGGATAAACTCTACAGAAGGAAAATTCAGAGTCAGTAGATGCTTCATATGCCTAATCAAATTAGATCCCAATCGACTTCTCTTGCTTCACTTCACAATCATCACAGATATTTGGGGCATGTTTTTCTCTATTTTCGGTCTTAAAGCATAAAAGAGGCCTATGAACGCTGGTCTAAATCGAAAGTTGATTAGTCCATCGCAGATGATTCCTGCCTTATCTTTTGAGGACAGAAAAGAATTATAGATGTTTTTATGGGATTTCAACACCTACTTATTTTCTGAAGG</gDNA_template>
            <first_frame> A  F  C  Y  V  I  *  I  T  I  *  I  G  K  C  T  N  I  *  F  W  E  D  K  W  L  G  G  S  T  L  K  N  E  F  P  S  L  Y  Q  I  A  Q  N  I  T  L  P  S  L  R  I  G  K  I  T  A  G  K  Y  S  S  G  G  I  F  K  I  G  N  C  L  T  L  *  R  Y  G  L  N  *  N  T  L  V  K  S  C  I  T  D  N  L  K  W  K  D  G  P  Y  S  V  S  G  G  F  A  H  L  C  S  P  T  M  R  *  L  I  D  G  S  G  N  *  S  F  S  Q  D  H  M  F  *  L  D  S  F  T  *  S  M  P  C  I  G  *  T  L  Q  K  E  N  S  E  S  V  D  A  S  Y  A  *  S  N  *  I  P  I  D  F  S  C  F  T  S  Q  S  S  Q  I  F  G  A  C  F  S  L  F  S  V  L  K  H  K  R  G  L  *  T  L  V  *  I  E  S  *  L  V  H  R  R  *  F  L  P  Y  L  L  R  T  E  K  N  Y  R  C  F  Y  G  I  S  T  P  T  Y  F  L  K  </first_frame>
            <second_frame>  P  S  A  M  *  Y  R  *  Q  F  K  L  G  S  V  P  T  F  N  S  G  K  T  N  G  *  G  D  L  P  *  R  M  N  F  Q  A  C  I  R  *  L  R  T  *  L  Y  H  L  S  E  L  A  K  *  L  L  A  N  T  V  Q  E  E  Y  L  R  L  G  T  A  S  P  Y  R  G  M  A  *  I  R  T  L  L  S  S  H  V  L  L  T  T  *  N  G  R  M  V  P  I  Q  Y  R  E  A  L  L  I  Y  A  L  L  Q  *  G  N  *  *  M  A  L  E  I  K  A  S  L  K  I  I  C  S  S  W  T  A  L  H  E  A  C  L  A  *  D  K  L  Y  R  R  K  I  Q  S  Q  *  M  L  H  M  P  N  Q  I  R  S  Q  S  T  S  L  A  S  L  H  N  H  H  R  Y  L  G  H  V  F  L  Y  F  R  S  *  S  I  K  E  A  Y  E  R  W  S  K  S  K  V  D  *  S  I  A  D  D  S  C  L  I  F  *  G  Q  K  R  I  I  D  V  F  M  G  F  Q  H  L  L  I  F  *  R </second_frame>
            <third_frame>   L  L  L  C  N  I  D  N  N  L  N  W  E  V  Y  Q  H  L  I  L  G  R  Q  M  V  R  G  I  Y  P  K  E  *  I  S  K  L  V  S  D  S  S  E  H  N  F  T  I  S  Q  N  W  Q  N  N  C  W  Q  I  Q  F  R  R  N  I  *  D  W  E  L  P  H  L  I  E  V  W  P  K  L  E  H  S  C  Q  V  M  Y  Y  *  Q  P  K  M  E  G  W  S  L  F  S  I  G  R  L  C  S  S  M  L  S  Y  N  E  V  I  D  R  W  L  W  K  L  K  L  L  S  R  S  Y  V  L  A  G  Q  L  Y  M  K  H  A  L  H  R  I  N  S  T  E  G  K  F  R  V  S  R  C  F  I  C  L  I  K  L  D  P  N  R  L  L  L  L  H  F  T  I  I  T  D  I  W  G  M  F  F  S  I  F  G  L  K  A  *  K  R  P  M  N  A  G  L  N  R  K  L  I  S  P  S  Q  M  I  P  A  L  S  F  E  D  R  K  E  L  *  M  F  L  W  D  F  N  T  Y  L  F  S  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0024K05.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83961" stop="84269"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>306</number_coding_nucleotides>
                  <number_encoded_amino_acids>102</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QPKMEGWSLFSIGRLCSSMLSYNEVIDRWLWKLKLLSRSYVLAGQLYMKHALHRINSTEGKFRVSRCFICLIKLDPNRLLLLHFTIITDIWGMFFSIFGLKA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="89277" PGL_stop="88934"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="89277" e_stop="88934"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="89277" e_stop="88934" e_length="344"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89277" stop="88934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596906" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAGACAAATCACTCTGATTGACAGCGTTATGGTACAAGACTATGCTTGATCACGGTTTACAACACAACTAATTGCCACTACATTCTACCAAAATAAAACACGCATATCACACGCGCATCCAAACGTTAGGACATAATACATCTTCATCCAACTTGATCCATAAACTACATTTTACATCACCACATAACATGAGAAAGTGAACAACCCTATTCTTCATCTTCACCATCGTAGTATTCTTCATCATCGTCACTGCTCCCGTAATAGTAGTCATATTCATCATCATCCTCTTCTTTGTCATATAGAAGCCCTTTTATACTCTTGGTCCTCATCTGTTCTTGAATTCG</gDNA_template>
            <first_frame> *  T  N  H  S  D  *  Q  R  Y  G  T  R  L  C  L  I  T  V  Y  N  T  T  N  C  H  Y  I  L  P  K  *  N  T  H  I  T  R  A  S  K  R  *  D  I  I  H  L  H  P  T  *  S  I  N  Y  I  L  H  H  H  I  T  *  E  S  E  Q  P  Y  S  S  S  S  P  S  *  Y  S  S  S  S  S  L  L  P  *  *  *  S  Y  S  S  S  S  S  S  L  S  Y  R  S  P  F  I  L  L  V  L  I  C  S  *  I   </first_frame>
            <second_frame>  R  Q  I  T  L  I  D  S  V  M  V  Q  D  Y  A  *  S  R  F  T  T  Q  L  I  A  T  T  F  Y  Q  N  K  T  R  I  S  H  A  H  P  N  V  R  T  *  Y  I  F  I  Q  L  D  P  *  T  T  F  Y  I  T  T  *  H  E  K  V  N  N  P  I  L  H  L  H  H  R  S  I  L  H  H  R  H  C  S  R  N  S  S  H  I  H  H  H  P  L  L  C  H  I  E  A  L  L  Y  S  W  S  S  S  V  L  E  F  </second_frame>
            <third_frame>   D  K  S  L  *  L  T  A  L  W  Y  K  T  M  L  D  H  G  L  Q  H  N  *  L  P  L  H  S  T  K  I  K  H  A  Y  H  T  R  I  Q  T  L  G  H  N  T  S  S  S  N  L  I  H  K  L  H  F  T  S  P  H  N  M  R  K  *  T  T  L  F  F  I  F  T  I  V  V  F  F  I  I  V  T  A  P  V  I  V  V  I  F  I  I  I  L  F  F  V  I  *  K  P  F  Y  T  L  G  P  H  L  F  L  N  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0024K05.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="90377" PGL_stop="99655"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90377" e_stop="90548"/>
            <exon e_start="93153" e_stop="93304"/>
            <exon e_start="93393" e_stop="93565"/>
            <exon e_start="94293" e_stop="94370"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.984" e_score="0.994"/>
          <exon-intron don_prob="0.985" acc_prob="0.528" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.706" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="90377" e_stop="90548" e_length="172"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.984">
            <gDNA_intron_boundary i_start="90549" i_stop="93152" i_length="2604"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="93153" e_stop="93304" e_length="152"/>
          </exon>
          <intron i_serial="2" don_prob="0.985" acc_prob="0.528">
            <gDNA_intron_boundary i_start="93305" i_stop="93392" i_length="88"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="93393" e_stop="93565" e_length="173"/>
          </exon>
          <intron i_serial="3" don_prob="0.986" acc_prob="0.706">
            <gDNA_intron_boundary i_start="93566" i_stop="94292" i_length="727"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="94293" e_stop="94370" e_length="78"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90377" stop="90548"/>
              <exon start="93153" stop="93304"/>
              <exon start="93393" stop="93565"/>
              <exon start="94293" stop="94370"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U589113" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCTATGTGTATTTGGAGCCCTAATTCCTAAATCAAAACTCACAGGCCACAGCCTCCAGCTCTCTCTTTTTTGTTCTCTGAACTCTCAGAGACACTGTGTCGGCGACCAGCAAGCACAGCGGCGCAGCAAAACTCTCGTCTGTCGACTCTCTATCTCTCAGCGTGACGGATT : ATTGGTTTGGCCCTCCCTGTTTGTGCAGCAGCTGTCAGAGATCCATATCCCATTCTACGAGAGTTTTAGCTTGCCAAATCTCGACAGATTTATTCTTAACACTGTCCACTAATCTCTTTGACTTAGCTACTTGTTCACTTAGGAATCAAGAG : TAGAGAGATGGGGAAGAATAAGAGCTCAAGGAAAGGGAAGAAGGCATGGAGAGCCAACATAAGTACGGAGGATATTGAAGATTTCTTTGACAACTCCACTAAAGATGCTCTTTCAGGCGGTTCTCTTGCTCAAGTTCCCAGTGACTCTCTCTTTTATGTCGACAAATCCAGAG : ATCTTTCTGTCAAACGGAAAATTGAAAAACACCGGGAGAAAGTACTTCGATATGATAGTATACTACAAAGCAATGCCT</gDNA_template>
            <first_frame> T  Y  V  Y  L  E  P  *  F  L  N  Q  N  S  Q  A  T  A  S  S  S  L  F  F  V  L  *  T  L  R  D  T  V  S  A  T  S  K  H  S  G  A  A  K  L  S  S  V  D  S  L  S  L  S  V  T  D   : Y  W  F  G  P  P  C  L  C  S  S  C  Q  R  S  I  S  H  S  T  R  V  L  A  C  Q  I  S  T  D  L  F  L  T  L  S  T  N  L  F  D  L  A  T  C  S  L  R  N  Q  E  :  *  R  D  G  E  E  *  E  L  K  E  R  E  E  G  M  E  S  Q  H  K  Y  G  G  Y  *  R  F  L  *  Q  L  H  *  R  C  S  F  R  R  F  S  C  S  S  S  Q  *  L  S  L  L  C  R  Q  I  Q  R :   S  F  C  Q  T  E  N  *  K  T  P  G  E  S  T  S  I  *  *  Y  T  T  K  Q  C   </first_frame>
            <second_frame>  P  M  C  I  W  S  P  N  S  *  I  K  T  H  R  P  Q  P  P  A  L  S  F  L  F  S  E  L  S  E  T  L  C  R  R  P  A  S  T  A  A  Q  Q  N  S  R  L  S  T  L  Y  L  S  A  *  R  I  :  I  G  L  A  L  P  V  C  A  A  A  V  R  D  P  Y  P  I  L  R  E  F  *  L  A  K  S  R  Q  I  Y  S  *  H  C  P  L  I  S  L  T  *  L  L  V  H  L  G  I  K  S :   R  E  M  G  K  N  K  S  S  R  K  G  K  K  A  W  R  A  N  I  S  T  E  D  I  E  D  F  F  D  N  S  T  K  D  A  L  S  G  G  S  L  A  Q  V  P  S  D  S  L  F  Y  V  D  K  S  R   : D  L  S  V  K  R  K  I  E  K  H  R  E  K  V  L  R  Y  D  S  I  L  Q  S  N  A  </second_frame>
            <third_frame>   L  C  V  F  G  A  L  I  P  K  S  K  L  T  G  H  S  L  Q  L  S  L  F  C  S  L  N  S  Q  R  H  C  V  G  D  Q  Q  A  Q  R  R  S  K  T  L  V  C  R  L  S  I  S  Q  R  D  G  L :   L  V  W  P  S  L  F  V  Q  Q  L  S  E  I  H  I  P  F  Y  E  S  F  S  L  P  N  L  D  R  F  I  L  N  T  V  H  *  S  L  *  L  S  Y  L  F  T  *  E  S  R   : V  E  R  W  G  R  I  R  A  Q  G  K  G  R  R  H  G  E  P  T  *  V  R  R  I  L  K  I  S  L  T  T  P  L  K  M  L  F  Q  A  V  L  L  L  K  F  P  V  T  L  S  F  M  S  T  N  P  E  :  I  F  L  S  N  G  K  L  K  N  T  G  R  K  Y  F  D  M  I  V  Y  Y  K  A  M  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0024K05.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90379" stop="90548"/>
                    <exon start="93153" stop="93264"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LCVFGALIPKSKLTGHSLQLSLFCSLNSQRHCVGDQQAQRRSKTLVCRLSISQRDGLLVWPSLFVQQLSEIHIPFYESFSLPNLDRFILNTVH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0024K05.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93279" stop="93304"/>
                    <exon start="93393" stop="93565"/>
                    <exon start="94293" stop="94369"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLVHLGIKSREMGKNKSSRKGKKAWRANISTEDIEDFFDNSTKDALSGGSLAQVPSDSLFYVDKSRDLSVKRKIEKHREKVLRYDSILQSNA</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0024K05.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90458" stop="90548"/>
                    <exon start="93153" stop="93304"/>
                    <exon start="93393" stop="93395"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TLRDTVSATSKHSGAAKLSSVDSLSLSVTDYWFGPPCLCSSCQRSISHSTRVLACQISTDLFLTLSTNLFDLATCSLRNQE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="90429" e_stop="90548"/>
            <exon e_start="93393" e_stop="93565"/>
            <exon e_start="94293" e_stop="94462"/>
            <exon e_start="94631" e_stop="94679"/>
            <exon e_start="94767" e_stop="94792"/>
            <exon e_start="96136" e_stop="96216"/>
            <exon e_start="96305" e_stop="96415"/>
            <exon e_start="96533" e_stop="96615"/>
            <exon e_start="97803" e_stop="97922"/>
            <exon e_start="98015" e_stop="98137"/>
            <exon e_start="98393" e_stop="98459"/>
            <exon e_start="98550" e_stop="98629"/>
            <exon e_start="99168" e_stop="99655"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.528" e_score="0.992"/>
          <exon-intron don_prob="0.986" acc_prob="0.706" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.907" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.918" acc_prob="0.942" e_score="1.000"/>
          <exon-intron don_prob="0.942" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="90429" e_stop="90548" e_length="120"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.528">
            <gDNA_intron_boundary i_start="90549" i_stop="93392" i_length="2844"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="93393" e_stop="93565" e_length="173"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.706">
            <gDNA_intron_boundary i_start="93566" i_stop="94292" i_length="727"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="94293" e_stop="94462" e_length="170"/>
          </exon>
          <intron i_serial="3" don_prob="0.977" acc_prob="0.998">
            <gDNA_intron_boundary i_start="94463" i_stop="94630" i_length="168"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="94631" e_stop="94679" e_length="49"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.990">
            <gDNA_intron_boundary i_start="94680" i_stop="94766" i_length="87"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="94767" e_stop="94792" e_length="26"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.987">
            <gDNA_intron_boundary i_start="94793" i_stop="96135" i_length="1343"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="96136" e_stop="96216" e_length="81"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.907">
            <gDNA_intron_boundary i_start="96217" i_stop="96304" i_length="88"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="96305" e_stop="96415" e_length="111"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.969">
            <gDNA_intron_boundary i_start="96416" i_stop="96532" i_length="117"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="96533" e_stop="96615" e_length="83"/>
          </exon>
          <intron i_serial="8" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="96616" i_stop="97802" i_length="1187"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="97803" e_stop="97922" e_length="120"/>
          </exon>
          <intron i_serial="9" don_prob="0.960" acc_prob="1.000">
            <gDNA_intron_boundary i_start="97923" i_stop="98014" i_length="92"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="98015" e_stop="98137" e_length="123"/>
          </exon>
          <intron i_serial="10" don_prob="0.918" acc_prob="0.942">
            <gDNA_intron_boundary i_start="98138" i_stop="98392" i_length="255"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="98393" e_stop="98459" e_length="67"/>
          </exon>
          <intron i_serial="11" don_prob="0.942" acc_prob="1.000">
            <gDNA_intron_boundary i_start="98460" i_stop="98549" i_length="90"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="98550" e_stop="98629" e_length="80"/>
          </exon>
          <intron i_serial="12" don_prob="0.989" acc_prob="0.997">
            <gDNA_intron_boundary i_start="98630" i_stop="99167" i_length="538"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="99168" e_stop="99655" e_length="488"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90429" stop="90548"/>
              <exon start="93393" stop="93565"/>
              <exon start="94293" stop="94462"/>
              <exon start="94631" stop="94679"/>
              <exon start="94767" stop="94792"/>
              <exon start="96136" stop="96216"/>
              <exon start="96305" stop="96415"/>
              <exon start="96533" stop="96615"/>
              <exon start="97803" stop="97922"/>
              <exon start="98015" stop="98137"/>
              <exon start="98393" stop="98459"/>
              <exon start="98550" stop="98629"/>
              <exon start="99168" stop="99655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584477" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCTCCAGCTCTCTCTTTTTTGTTCTCTGAACTCTCAGAGACACTGTGTCGGCGACCAGCAAGCACAGCGGCGCAGCAAAACTCTCGTCTGTCGACTCTCTATCTCTCAGCGTGACGGATT : TAGAGAGATGGGGAAGAATAAGAGCTCAAGGAAAGGGAAGAAGGCATGGAGAGCCAACATAAGTACGGAGGATATTGAAGATTTCTTTGACAACTCCACTAAAGATGCTCTTTCAGGCGGTTCTCTTGCTCAAGTTCCCAGTGACTCTCTCTTTTATGTCGACAAATCCAGAG : ATCTTTCTGTCAAACGGAAAATTGAAAAACACCGGGAGAAAGTACTTCGATATGATAGTATACTACAAAGCAATGCCTTTGTTGAACCTGTACCTTCTTCAACTGGGAAGAAATCCAAGAAGAAAAGTAAACTTCAGATAGCCAAGGATACTGCTCAACAGGGTCAAAAG : GATTCGTCTGGTGGAGACTCTGGCATGGTTGACATTTGGAATGATAAAG : ATGAACTGGTCATCAAAACCAAAAAG : AAGCCCAAGACTTCTGTTATACCTGCTGTGGAAGTTGAGCCTCCAGGATGCTCATTCAATCCTCCATCCGAAAGTCATCAG : GATGCATTAGCTTGTGCTGTTGCAGATGAAATGCAGAAAATTTATAGAAATGAATTGGGTCCGGAGCCTATTCCATTGGTTGTTCCTGGAGAGGTAGTCAATGAAGAAGAT : ATGTATTTCCTTGAAGCGGACAGTGGGAGTGACACGGAGAATGAAAATCTAGTGGAAGACGGAAAAACAGATTTGGATAAAAG : GCCGCAAAAGCCCAAAATGCTGACTCAAGTTGAGAAGAATCGACGGGCTAGACGCAAAGAACAGTTGAAAGCAGAAGCTGAAGCAACAAAAGCAGCACAACTCTCCAAAGAGATTGATAG : CTTACCGGATATTATTCAAGAAATAGAGAGAGAGGAAGGAGAAAAACAGAAACGACATCTACGTCGTGTCACTGCTATAAAAGAAAAACTAAAATCTTGTCCACCACGCTTGGGAAAGCGCAA : ATTCGTGCCTGCTCCTGCTCAGGTTTTACTGTCTGAAGAGATTACTGGTTCCCTGCGTAAATTAAAG : GGATGTTGCACCCTTGCAAGAGATCGATTTAAAAGCCTGGAGAAAAGGGGACTAGTTGTTCCTTCAAAAAAGAGTAGCAG : GAAATAGAGTGAATTGCAAGTAACACAGATAAATGTTTTCATCACCGCACTATGAGACCATCATCCCGATCACCTGGATGAGAGACACTGTAGACAGCAAGGTGTTGGTTTATGTCTGCAAATTTGGAGTGGTAGAGCTGGCTGCTCTTACTGTTAGCAAAATGGAGATGTAGATCTGTTTATCTTACTGATGCATATGGTTCATTACACAATATTTTATAGTCATGGTCAAGTTACTTTGGGAGCAAAAGTGATAATTAATTACTGATGTATCTGGAGGCAGAAGATTGGTGTGATTTCTCTTGATGAACCAGAAATGATTCCCAGAGTCAGCCTTTTTTAAATTTTAAAATGGGAACTCTCATAATCAATATGTACCCCAAAGTTTTTAATTACTCTAATTAGGTCAACTTTTTATTTGATCACATTAGATCAACTATATATCACAAATTTTGATTTTCAAGACTTGAAAGACAACATTTTCTACT</gDNA_template>
            <first_frame> P  P  A  L  S  F  L  F  S  E  L  S  E  T  L  C  R  R  P  A  S  T  A  A  Q  Q  N  S  R  L  S  T  L  Y  L  S  A  *  R  I  :  *  R  D  G  E  E  *  E  L  K  E  R  E  E  G  M  E  S  Q  H  K  Y  G  G  Y  *  R  F  L  *  Q  L  H  *  R  C  S  F  R  R  F  S  C  S  S  S  Q  *  L  S  L  L  C  R  Q  I  Q  R :   S  F  C  Q  T  E  N  *  K  T  P  G  E  S  T  S  I  *  *  Y  T  T  K  Q  C  L  C  *  T  C  T  F  F  N  W  E  E  I  Q  E  E  K  *  T  S  D  S  Q  G  Y  C  S  T  G  S  K   : G  F  V  W  W  R  L  W  H  G  *  H  L  E  *  *  R :   *  T  G  H  Q  N  Q  K   : E  A  Q  D  F  C  Y  T  C  C  G  S  *  A  S  R  M  L  I  Q  S  S  I  R  K  S  S   : G  C  I  S  L  C  C  C  R  *  N  A  E  N  L  *  K  *  I  G  S  G  A  Y  S  I  G  C  S  W  R  G  S  Q  *  R  R   : Y  V  F  P  *  S  G  Q  W  E  *  H  G  E  *  K  S  S  G  R  R  K  N  R  F  G  *  K  :  A  A  K  A  Q  N  A  D  S  S  *  E  E  S  T  G  *  T  Q  R  T  V  E  S  R  S  *  S  N  K  S  S  T  T  L  Q  R  D  *  *  :  L  T  G  Y  Y  S  R  N  R  E  R  G  R  R  K  T  E  T  T  S  T  S  C  H  C  Y  K  R  K  T  K  I  L  S  T  T  L  G  K  A  Q  :  I  R  A  C  S  C  S  G  F  T  V  *  R  D  Y  W  F  P  A  *  I  K   : G  M  L  H  P  C  K  R  S  I  *  K  P  G  E  K  G  T  S  C  S  F  K  K  E  *  Q  :  E  I  E  *  I  A  S  N  T  D  K  C  F  H  H  R  T  M  R  P  S  S  R  S  P  G  *  E  T  L  *  T  A  R  C  W  F  M  S  A  N  L  E  W  *  S  W  L  L  L  L  L  A  K  W  R  C  R  S  V  Y  L  T  D  A  Y  G  S  L  H  N  I  L  *  S  W  S  S  Y  F  G  S  K  S  D  N  *  L  L  M  Y  L  E  A  E  D  W  C  D  F  S  *  *  T  R  N  D  S  Q  S  Q  P  F  L  N  F  K  M  G  T  L  I  I  N  M  Y  P  K  V  F  N  Y  S  N  *  V  N  F  L  F  D  H  I  R  S  T  I  Y  H  K  F  *  F  S  R  L  E  R  Q  H  F  L   </first_frame>
            <second_frame>  L  Q  L  S  L  F  C  S  L  N  S  Q  R  H  C  V  G  D  Q  Q  A  Q  R  R  S  K  T  L  V  C  R  L  S  I  S  Q  R  D  G  F :   R  E  M  G  K  N  K  S  S  R  K  G  K  K  A  W  R  A  N  I  S  T  E  D  I  E  D  F  F  D  N  S  T  K  D  A  L  S  G  G  S  L  A  Q  V  P  S  D  S  L  F  Y  V  D  K  S  R   : D  L  S  V  K  R  K  I  E  K  H  R  E  K  V  L  R  Y  D  S  I  L  Q  S  N  A  F  V  E  P  V  P  S  S  T  G  K  K  S  K  K  K  S  K  L  Q  I  A  K  D  T  A  Q  Q  G  Q  K  :  D  S  S  G  G  D  S  G  M  V  D  I  W  N  D  K   : D  E  L  V  I  K  T  K  K  :  K  P  K  T  S  V  I  P  A  V  E  V  E  P  P  G  C  S  F  N  P  P  S  E  S  H  Q  :  D  A  L  A  C  A  V  A  D  E  M  Q  K  I  Y  R  N  E  L  G  P  E  P  I  P  L  V  V  P  G  E  V  V  N  E  E  D  :  M  Y  F  L  E  A  D  S  G  S  D  T  E  N  E  N  L  V  E  D  G  K  T  D  L  D  K  R :   P  Q  K  P  K  M  L  T  Q  V  E  K  N  R  R  A  R  R  K  E  Q  L  K  A  E  A  E  A  T  K  A  A  Q  L  S  K  E  I  D  S :   L  P  D  I  I  Q  E  I  E  R  E  E  G  E  K  Q  K  R  H  L  R  R  V  T  A  I  K  E  K  L  K  S  C  P  P  R  L  G  K  R  K :   F  V  P  A  P  A  Q  V  L  L  S  E  E  I  T  G  S  L  R  K  L  K  :  G  C  C  T  L  A  R  D  R  F  K  S  L  E  K  R  G  L  V  V  P  S  K  K  S  S  R :   K  *  S  E  L  Q  V  T  Q  I  N  V  F  I  T  A  L  *  D  H  H  P  D  H  L  D  E  R  H  C  R  Q  Q  G  V  G  L  C  L  Q  I  W  S  G  R  A  G  C  S  Y  C  *  Q  N  G  D  V  D  L  F  I  L  L  M  H  M  V  H  Y  T  I  F  Y  S  H  G  Q  V  T  L  G  A  K  V  I  I  N  Y  *  C  I  W  R  Q  K  I  G  V  I  S  L  D  E  P  E  M  I  P  R  V  S  L  F  *  I  L  K  W  E  L  S  *  S  I  C  T  P  K  F  L  I  T  L  I  R  S  T  F  Y  L  I  T  L  D  Q  L  Y  I  T  N  F  D  F  Q  D  L  K  D  N  I  F  Y  </second_frame>
            <third_frame>   S  S  S  L  F  F  V  L  *  T  L  R  D  T  V  S  A  T  S  K  H  S  G  A  A  K  L  S  S  V  D  S  L  S  L  S  V  T  D   : L  E  R  W  G  R  I  R  A  Q  G  K  G  R  R  H  G  E  P  T  *  V  R  R  I  L  K  I  S  L  T  T  P  L  K  M  L  F  Q  A  V  L  L  L  K  F  P  V  T  L  S  F  M  S  T  N  P  E  :  I  F  L  S  N  G  K  L  K  N  T  G  R  K  Y  F  D  M  I  V  Y  Y  K  A  M  P  L  L  N  L  Y  L  L  Q  L  G  R  N  P  R  R  K  V  N  F  R  *  P  R  I  L  L  N  R  V  K  R :   I  R  L  V  E  T  L  A  W  L  T  F  G  M  I  K  :  M  N  W  S  S  K  P  K  R :   S  P  R  L  L  L  Y  L  L  W  K  L  S  L  Q  D  A  H  S  I  L  H  P  K  V  I  R :   M  H  *  L  V  L  L  Q  M  K  C  R  K  F  I  E  M  N  W  V  R  S  L  F  H  W  L  F  L  E  R  *  S  M  K  K  I :   C  I  S  L  K  R  T  V  G  V  T  R  R  M  K  I  *  W  K  T  E  K  Q  I  W  I  K   : G  R  K  S  P  K  C  *  L  K  L  R  R  I  D  G  L  D  A  K  N  S  *  K  Q  K  L  K  Q  Q  K  Q  H  N  S  P  K  R  L  I   : A  Y  R  I  L  F  K  K  *  R  E  R  K  E  K  N  R  N  D  I  Y  V  V  S  L  L  *  K  K  N  *  N  L  V  H  H  A  W  E  S  A   : N  S  C  L  L  L  L  R  F  Y  C  L  K  R  L  L  V  P  C  V  N  *  R :   D  V  A  P  L  Q  E  I  D  L  K  A  W  R  K  G  D  *  L  F  L  Q  K  R  V  A   : G  N  R  V  N  C  K  *  H  R  *  M  F  S  S  P  H  Y  E  T  I  I  P  I  T  W  M  R  D  T  V  D  S  K  V  L  V  Y  V  C  K  F  G  V  V  E  L  A  A  L  T  V  S  K  M  E  M  *  I  C  L  S  Y  *  C  I  W  F  I  T  Q  Y  F  I  V  M  V  K  L  L  W  E  Q  K  *  *  L  I  T  D  V  S  G  G  R  R  L  V  *  F  L  L  M  N  Q  K  *  F  P  E  S  A  F  F  K  F  *  N  G  N  S  H  N  Q  Y  V  P  Q  S  F  *  L  L  *  L  G  Q  L  F  I  *  S  H  *  I  N  Y  I  S  Q  I  L  I  F  K  T  *  K  T  T  F  S  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0024K05.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90430" stop="90548"/>
                    <exon start="93393" stop="93565"/>
                    <exon start="94293" stop="94462"/>
                    <exon start="94631" stop="94679"/>
                    <exon start="94767" stop="94792"/>
                    <exon start="96136" stop="96216"/>
                    <exon start="96305" stop="96415"/>
                    <exon start="96533" stop="96615"/>
                    <exon start="97803" stop="97922"/>
                    <exon start="98015" stop="98137"/>
                    <exon start="98393" stop="98459"/>
                    <exon start="98550" stop="98629"/>
                    <exon start="99168" stop="99174"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1206</number_coding_nucleotides>
                  <number_encoded_amino_acids>402</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQLSLFCSLNSQRHCVGDQQAQRRSKTLVCRLSISQRDGFREMGKNKSSRKGKKAWRANISTEDIEDFFDNSTKDALSGGSLAQVPSDSLFYVDKSRDLSVKRKIEKHREKVLRYDSILQSNAFVEPVPSSTGKKSKKKSKLQIAKDTAQQGQKDSSGGDSGMVDIWNDKDELVIKTKKKPKTSVIPAVEVEPPGCSFNPPSESHQDALACAVADEMQKIYRNELGPEPIPLVVPGEVVNEEDMYFLEADSGSDTENENLVEDGKTDLDKRPQKPKMLTQVEKNRRARRKEQLKAEAEATKAAQLSKEIDSLPDIIQEIEREEGEKQKRHLRRVTAIKEKLKSCPPRLGKRKFVPAPAQVLLSEEITGSLRKLKGCCTLARDRFKSLEKRGLVVPSKKSSRK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 30 chains have been computed
$ 
$ memory statistics:
$ 94320 bytes spliced alignments in total
$ 16 spliced alignments have been stored
$ 5895 bytes was the average size of a spliced alignment
$ 18088 bytes predicted gene locations in total
$ 10 predicted gene locations have been stored
$ 1808 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 33 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-29 02:07:18
-->
