<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 10:52:52"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E201030" ref_strand="+" ref_description="SGN-E201030 [cLEC-5-H2]">
      <seq>ggaaagcgccaaggaatactacaatcgacagccctccccctcgcgccccgttcgcggatcgtgcggggggaagcgcgctgctctgttaacacaaacgactctcggcaacggatatctcggctctcgcatcgatgaagaacgtagcgaaatgcgatacttggtgtgaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="51" stop="819"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="351" g_stop="519" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="169" r_length="169" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E201030" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>169</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E201030" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="351" e_stop="519"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAGCGCCAAGGAATACTACAATCGACAGCCCTCCCCCTCGCGCCCCGTTCGCGGATCGTGCGGGGGGAAGCGCGCTGCTCTGTTAACACAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATT</genome_strand>
        <mrna_strand>GGAAAGCGCCAAGGAATACTACAATCGACAGCCCTCCCCCTCGCGCCCCGTTCGCGGATCGTGCGGGGGGAAGCGCGCTGCTCTGTTAACACAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E545077" ref_strand="+" ref_description="SGN-E545077 [TUS-67-L21](-)">
      <seq>cggcaacggatatctcggctctcgcatcgatgaagaacgtagcgaaatgcgatacttggtgtgaattgcagaatcccgtgaaccatcgagtctttgaacgcaagttgcgcccgaagccatttggccgagggcacgtctgcctgggcgtcacgcatcgcgtcgccccctcgcacgccgcaaggctttagcgcgggggcggaagctggcctcccgtgcgccccgagcgcgcggccggcctaaatgcgagtccacgtcgacggataaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="153" stop="1013"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="453" g_stop="714" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="263" polyA_stop="280"/>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E545077" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>262</cumulative_length_of_scored_exons>
        <coverage percentage="0.936" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545077" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="453" e_stop="714"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCTCGCACGCCGCAAGGCTTTAGCGCGGGGGCGGAAGCTGGCCTCCCGTGCGCCCCGAGCGCGCGGCCGGCCTAAATGCGAGTCCACGTCGACGGAC</genome_strand>
        <mrna_strand>CGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCTCGCACGCCGCAAGGCTTTAGCGCGGGGGCGGAAGCTGGCCTCCCGTGCGCCCCGAGCGCGCGGCCGGCCTAAATGCGAGTCCACGTCGACGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E545078" ref_strand="+" ref_description="SGN-E545078 [TUS-67-L21]">
      <seq>cggcaacggatatctcggctctcgcatcgatgaagaacgtagcgaaatgcgatacttggtgtgaattgcagaatcccgtgaaccatcgagtctttgaacgcaagttgcgcccgaagccatttggccgagggcacgtctgcctgggcgtcacgcatcgcgtcgccccctcgcacgccgcaaggctttagcgcgggggcggaagctggcctcccgtgcgccccgagcgcgcggccggcctaaatgcgagtccacgtcgacggataaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="153" stop="1013"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="453" g_stop="714" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="263" polyA_stop="280"/>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E545078" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>262</cumulative_length_of_scored_exons>
        <coverage percentage="0.936" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545078" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="453" e_stop="714"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCTCGCACGCCGCAAGGCTTTAGCGCGGGGGCGGAAGCTGGCCTCCCGTGCGCCCCGAGCGCGCGGCCGGCCTAAATGCGAGTCCACGTCGACGGAC</genome_strand>
        <mrna_strand>CGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCTCGCACGCCGCAAGGCTTTAGCGCGGGGGCGGAAGCTGGCCTCCCGTGCGCCCCGAGCGCGCGGCCGGCCTAAATGCGAGTCCACGTCGACGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E309675" ref_strand="+" ref_description="SGN-E309675 [cLEY-26-C15]">
      <seq>ggcaacggatatctcggctctcgcatcgatgaagaacgtagcgaaatgcgatacttggtgtgaattgcagaatcccgtgaaccatcgagtctttgaacgcaagttgcgcccgaagccatttggccgagggcacgtctgcctgggcgtcacgcatcgcgtcgccccctcgcacgccgcaaggctttagcgcgggggcggaagctggcctcccgtgcgccccgagcgcgcggccggcctaaatgcgagtccacgtcgacggataaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="154" stop="1013"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="454" g_stop="714" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="261" r_length="261" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="262" polyA_stop="279"/>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E309675" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>261</cumulative_length_of_scored_exons>
        <coverage percentage="0.935" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E309675" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="454" e_stop="714"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCTCGCACGCCGCAAGGCTTTAGCGCGGGGGCGGAAGCTGGCCTCCCGTGCGCCCCGAGCGCGCGGCCGGCCTAAATGCGAGTCCACGTCGACGGAC</genome_strand>
        <mrna_strand>GGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCTCGCACGCCGCAAGGCTTTAGCGCGGGGGCGGAAGCTGGCCTCCCGTGCGCCCCGAGCGCGCGGCCGGCCTAAATGCGAGTCCACGTCGACGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E297777" ref_strand="+" ref_description="SGN-E297777 [cLET-38-K10]">
      <seq>ggcaacggatatctcggctctcgcatcgatgaagaacgtagcgaaatgcgatacttggtgtgaattgcagaatcccgtgaaccatcgagtctttgaacgcaagttgcgcccgaagccatttggccgagggcacgtctgcctgggcgtcacgcatcgcgtcgaaaattaaagaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="154" stop="914"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="454" g_stop="613" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E297777" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>160</cumulative_length_of_scored_exons>
        <coverage percentage="0.909" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E297777" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="454" e_stop="613"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTC</genome_strand>
        <mrna_strand>GGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E337107" ref_strand="+" ref_description="SGN-E337107 [cTOE-7-M8]">
      <seq>ctgagcggggccgaagccagaggaaactctggtggaggcccccagcgatacctgacctgcaaatcgttcgtctgacttgggtataggggcgaaagactaatcgaaccctctagtagctggttccctccgaagtttccctcaggatagctggagctcgcgtgccgagttctatcgggtaaagccaatgattagaggcctcgggggcgccacgccctcgacctattctcaaactttaaataggtaggacggcgcggctgctttgttgagccgcgccacggaatcaagagctccaagtgggccatttttggtaagcagaactggcgatgcgggatgaaccggaagccgggttacggtgccaaactgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="1357" stop="2317"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1657" g_stop="2017" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E337107" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>361</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337107" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1657" e_stop="2017"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAGCGGGG-CGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATA-CTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGCGTG-CGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCCTCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGCGCCACGGAATCAAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTGC</genome_strand>
        <mrna_strand>CTGAGCGGGGCCGAAGCCAGAGGAAACTCTGGTGGAGGCCCCCAGCGATACCTGACCTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCCTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGCGTGCCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCCTCGGGGGCGCCACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGCGCCACGGAATCAAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E337304" ref_strand="+" ref_description="SGN-E337304 [cTOE-7-H4]">
      <seq>ggaggcccgcagcgatactgacgtgcaaatcgttcgtctgacttgggtgtaggggcgaaagactaatcgaaccgtctagtagctggttccctccgaagtttccctcaggatagctggagctcgcgtgcgagttctatcgggtaaagccaatgattagaggcctcgggggcgcaacgccctcgacctattctcaaactttaaataggtaggacggcgcggctgctttgttgagccgcgccacggaatcaagagctgcaagtgggccatttttggtaagcagaactggcgatgcgggatgaaccggaagccgggttacggtgccaaactgcgcgctaacctatatcccacaaagggtgttggtcgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="1389" stop="2353"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1689" g_stop="2053" g_length="365"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="365" r_length="365" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E337304" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>365</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337304" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1689" e_stop="2053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGCGTGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCCTCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGCGCCACGGAATCAAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTGCGCGCTAACCTAGATCCCACAAAGGGTGTTGGTCGAT</genome_strand>
        <mrna_strand>GGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTGTAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGCGTGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCCTCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGCGCCACGGAATCAAGAGCTGCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTGCGCGCTAACCTATATCCCACAAAGGGTGTTGGTCGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E244039" ref_strand="+" ref_description="SGN-E244039 [cLEE-1-D5]">
      <seq>gcccgacgtcgctcgaacgtgtgtgctgcccaaaggcgatgatgacatgccacgcccgacgtcgttcgaccgtgtgtgctgcccaaaggcgtattttgcagtccacgcccgttcggcgcaggcctttgcagatgccgcctggccgcggacgtgctgcgtacgcagacccatttgccccttgacatctaacttggctttaataatcgcacccgacatcccgaaaacctcttacagtgacatgtcattagtcccttaacatgtcattaggcttgataaatgaactcaacttcacgaaaaactcgcaatggggctcagaacgcatagctcaacacttagcggcagactagtgaacttcacttgccgtgttacttttgaaacttatatttcaacacttagttattttttcctcttcgaaggatgcaggcagcacgcgaacctcacatttgaaaagttagaaatgattggatttgattttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="-" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="5012" stop="3937"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4712" g_stop="4237" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="476" r_length="476" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="-" ref_id="SGN-E244039" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244039" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4712" e_stop="4237"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCGACGTCGCTCGAACGTGTGTGCTGCCCAAAGGCGATGATGACATGCCACGCCCGACGTCGTTCGACCGTGTGTGCTGCCCAAAGGCGTATTTTGCAGTCCACGCCCGTTCGGCGCAGGCCTTTGCAGATGCCGCCTGGCCGCGGACGTGCTGCGTACGCAGACCCATTTGCCCCTTGACATCTAACTTGGCTTTAATAATCGCACCCGACATCCCGAAAACCTCTTACAGTGACATGTCATTAGTCCCTTAACATGTCATTAGGCTTGATAAATGAACTCAACTTCACGAAAAACTCGCAATGGGGCTCAGAACGCATAGCTCAACACTTAGCGGCAGACTAGTGAACTTCACTTGCCGTGTTACTTTTGAAACTTATATTTCAACACTTAGTTATTTTTTCCTCTTCGAAGGATGCAGGCAGCACGCGAACCTCACATTTGAAAAGTTAGAAATGATTGGATTTGATTTTG</genome_strand>
        <mrna_strand>GCCCGACGTCGCTCGAACGTGTGTGCTGCCCAAAGGCGATGATGACATGCCACGCCCGACGTCGTTCGACCGTGTGTGCTGCCCAAAGGCGTATTTTGCAGTCCACGCCCGTTCGGCGCAGGCCTTTGCAGATGCCGCCTGGCCGCGGACGTGCTGCGTACGCAGACCCATTTGCCCCTTGACATCTAACTTGGCTTTAATAATCGCACCCGACATCCCGAAAACCTCTTACAGTGACATGTCATTAGTCCCTTAACATGTCATTAGGCTTGATAAATGAACTCAACTTCACGAAAAACTCGCAATGGGGCTCAGAACGCATAGCTCAACACTTAGCGGCAGACTAGTGAACTTCACTTGCCGTGTTACTTTTGAAACTTATATTTCAACACTTAGTTATTTTTTCCTCTTCGAAGGATGCAGGCAGCACGCGAACCTCACATTTGAAAAGTTAGAAATGATTGGATTTGATTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E368589" ref_strand="+" ref_description="SGN-E368589 [TUS-23-H22]">
      <seq>ttgttatgcatggaggttgtttcaaaatcctttgatttatgtacgccatgaacatccgcatgttttgtttggaactcgatgaatgttgcgcaagccacgaccgatgcgggcaggccacggccgaccgttgtgtgcaggcacgtccgacgacggccgaccgtttgtgctgtccaagggctatgatggcatgccacgcccgacgacggccgaccgtctatgctgtcaaagggcgaagatggcatgccacgcccgacgacggccgaccgtctatgctgtcaaagggcgaagatggcatgccacgcccgacgtcgttcgaccgtgtgtgctgcaaaaaggcgaagatggcatgccacgccagacgccgttcgaccgtgtgtgcccaaaggcgatgatggcatgccacgcccgacgtcgctcgaccgtgtgtgctgcccaaaggcgatggtggcatgccacgcccgacgtcgttcgaccgtgtgtactgcccaaaggcgatgatggcatgccacgcccgacgtcgctcgaacgtgtgtgctgcccaaaggcgatgatgacatgccacgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="-" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="5521" stop="4357"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5221" g_stop="4657" g_length="565"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="565" r_length="565" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="-" ref_id="SGN-E368589" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E368589" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5221" e_stop="4657"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTATGCATGGAGGTTGTTTCAAAATCCTTTGATTTATGTACGCCATGAACATCCGCATGTTTTGTTTGGAACTCGATGAATGTTGCGCAAGCCACGACCGATGCGGGCAGGCCACGGCCGACCGTTGTGTGCAGGCACGTCCGACGACGGCCGACCGTTTGTGCTGTCCAAGGGCTATGATGGCATGCCACGCCCGACGACGGCCGACCGTCTATGCTGTCAAAGGGCGAAGATGGCATGCCACGCCCGACGACGGCCGACCGTCTATGCTGTCAAAGGGCGAAGATGGCATGCCACGCCCGACGTCGTTCGACCGTGTGTGCTGCAAAAAGGCGAAGATGGCATGCCACGCCAGACGCCGTTCGACCGTGTGTGCCCAAAGGCGATGATGGCATGCCACGCCCGACGTCGCTCGACCGTGTGTGCTGCCCAAAGGCGATGGTGGCATGCCACGCCCGACGTCGTTCGACCGTTTGTACTGCCCAAAGGCGATGATGGCATGCCACGCCCGACGTCGCTCGAACGTGTGTGCTGCCCAAAGGCGATGATGACATGCCACGCC</genome_strand>
        <mrna_strand>TTGTTATGCATGGAGGTTGTTTCAAAATCCTTTGATTTATGTACGCCATGAACATCCGCATGTTTTGTTTGGAACTCGATGAATGTTGCGCAAGCCACGACCGATGCGGGCAGGCCACGGCCGACCGTTGTGTGCAGGCACGTCCGACGACGGCCGACCGTTTGTGCTGTCCAAGGGCTATGATGGCATGCCACGCCCGACGACGGCCGACCGTCTATGCTGTCAAAGGGCGAAGATGGCATGCCACGCCCGACGACGGCCGACCGTCTATGCTGTCAAAGGGCGAAGATGGCATGCCACGCCCGACGTCGTTCGACCGTGTGTGCTGCAAAAAGGCGAAGATGGCATGCCACGCCAGACGCCGTTCGACCGTGTGTGCCCAAAGGCGATGATGGCATGCCACGCCCGACGTCGCTCGACCGTGTGTGCTGCCCAAAGGCGATGGTGGCATGCCACGCCCGACGTCGTTCGACCGTGTGTACTGCCCAAAGGCGATGATGGCATGCCACGCCCGACGTCGCTCGAACGTGTGTGCTGCCCAAAGGCGATGATGACATGCCACGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E243494" ref_strand="+" ref_description="SGN-E243494 [cLED-34-P13]">
      <seq>ttgatatgcatggaggttgtttcaaaatcctttgatttatgtacgccatgaacatccgcatgttttgtttggaactcgatgaatgttgcgcaagccacgaccgatgcgggcaggccacggccgaccgttgtgtgcaggcacgttcgacgacggccgaccgtttgtgctgtccaagggctatgatggcatgccacgcccgacgacggccgaccgtctatgctgtcaaagggcgaagatggcatgccacgcccgacgacggacgaccgtctatgctgtcaaagggcgaagatggcatgccacgcccgacgtcgttcgaccgtgtgtgctgcaaaaaggcgaagatggcatgccacgccagacgccgttcgaccgtgtgtgcccaaaggcgatgatggcatgccacgcccgacgtcgctcgaccgtgtgtgctgcccaaaggcgatggtggcatgccacgcccgacgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="-" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="5521" stop="4457"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5221" g_stop="4757" g_length="465"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="465" r_length="465" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="-" ref_id="SGN-E243494" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243494" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5221" e_stop="4757"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTATGCATGGAGGTTGTTTCAAAATCCTTTGATTTATGTACGCCATGAACATCCGCATGTTTTGTTTGGAACTCGATGAATGTTGCGCAAGCCACGACCGATGCGGGCAGGCCACGGCCGACCGTTGTGTGCAGGCACGTCCGACGACGGCCGACCGTTTGTGCTGTCCAAGGGCTATGATGGCATGCCACGCCCGACGACGGCCGACCGTCTATGCTGTCAAAGGGCGAAGATGGCATGCCACGCCCGACGACGGCCGACCGTCTATGCTGTCAAAGGGCGAAGATGGCATGCCACGCCCGACGTCGTTCGACCGTGTGTGCTGCAAAAAGGCGAAGATGGCATGCCACGCCAGACGCCGTTCGACCGTGTGTGCCCAAAGGCGATGATGGCATGCCACGCCCGACGTCGCTCGACCGTGTGTGCTGCCCAAAGGCGATGGTGGCATGCCACGCCCGACGT</genome_strand>
        <mrna_strand>TTGATATGCATGGAGGTTGTTTCAAAATCCTTTGATTTATGTACGCCATGAACATCCGCATGTTTTGTTTGGAACTCGATGAATGTTGCGCAAGCCACGACCGATGCGGGCAGGCCACGGCCGACCGTTGTGTGCAGGCACGTTCGACGACGGCCGACCGTTTGTGCTGTCCAAGGGCTATGATGGCATGCCACGCCCGACGACGGCCGACCGTCTATGCTGTCAAAGGGCGAAGATGGCATGCCACGCCCGACGACGGACGACCGTCTATGCTGTCAAAGGGCGAAGATGGCATGCCACGCCCGACGTCGTTCGACCGTGTGTGCTGCAAAAAGGCGAAGATGGCATGCCACGCCAGACGCCGTTCGACCGTGTGTGCCCAAAGGCGATGATGGCATGCCACGCCCGACGTCGCTCGACCGTGTGTGCTGCCCAAAGGCGATGGTGGCATGCCACGCCCGACGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E578247" ref_strand="+" ref_description="SGN-E578247 [LE12BC08]">
      <seq>tttttttttttcgatattttccctattttttattaatttattactaatttttcggaattttcgaaaaaaataaaaattaaaaaaaattgttgaaaaatatttttttatacatattaaagtcaattatgaaggctgatgtgtgtttgtaccttagaccgcgcatatttgggttgtacattttcattatgattctctggaaaatccatgtctactcctgtcacatgggcaaaacttttttaagcatatataaggggggtagaggtgttggaggcagactgaggcgcaggcaggcagacggcataggcgtcccgtgggcttagcaggcgtgctgcgtgggcgcttgatggcatgcatggcttgtccgtgctacgccgttgggcgtttacaaaaacacgttggcgacgtcgacgggtcgagtgggcaacggcaggcggacgccgagggcgtcctgtgggcttagtaggcgtgctgcgtgggcgcttgatggcatgcatggctcgtccgtgctacgtcgttgggcgtctacaaaaacatgctagcgacgtttgcggggcaactgaagcgaaggcaggcggacgtcgagggcgtcctgtgggcttagtaggcgtgctgcgtgggcgcttgacggcatgcatggctcgtccgtgctacgccgttgggcgtttacaaaacacgcctgcgacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="5238" stop="6519"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5535" g_stop="6219" g_length="685"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="684" r_length="684" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E578247" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>685</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E578247" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5535" e_stop="6219"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATATTTTTTCGATATTTTCCCTATTTTTTATTAATTTATTACTAATTTTTTGGAATTTTTGAAAAAAATAAAAATCAAAAAAAATTGTTGAAAAATATTTTTTTATACATATTAAAGTCAATTATGAAGGCTGATGTGTGTTTGTACCTTAGACCGCGCATATTTGGGTTGTACATTTTCATTATGATTCTCTGGAAAATCCATGTCTACTCCTGTCACATGGGCAAAACTTTTTTAAGCATATATAAGGGGGGTAGAGGTGTTGGAGGCAGACTGAGGCGCAGGCAGGCAGACGGCATAGGCGTCCCGTGGGCTTAGCAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTTGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGTCGGCGACGTCGACGGGTCGAGTGGGCAACGGCAGGCGGACGCCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTCGTCCGTGCTACGTCGTTGGGCGTCTACAAAAACATGCTAGCGACGTTTGCGGGGCAACTGAAGCGAAGGCAGGCGGACGTCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGACGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGCCCGCGACG</genome_strand>
        <mrna_strand>TTTTTTTTTTTCGATATTTTCCCTATTTTTTATTAATTTATTACTAATTTTTCGGAATTTTCGAAAAAAATAAAAATTAAAAAAAATTGTTGAAAAATATTTTTTTATACATATTAAAGTCAATTATGAAGGCTGATGTGTGTTTGTACCTTAGACCGCGCATATTTGGGTTGTACATTTTCATTATGATTCTCTGGAAAATCCATGTCTACTCCTGTCACATGGGCAAAACTTTTTTAAGCATATATAAGGGGGGTAGAGGTGTTGGAGGCAGACTGAGGCGCAGGCAGGCAGACGGCATAGGCGTCCCGTGGGCTTAGCAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTTGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGTTGGCGACGTCGACGGGTCGAGTGGGCAACGGCAGGCGGACGCCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTCGTCCGTGCTACGTCGTTGGGCGTCTACAAAAACATGCTAGCGACGTTTGCGGGGCAACTGAAGCGAAGGCAGGCGGACGTCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGACGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGTTTAC-AAAACACGCCTGCGACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E337576" ref_strand="+" ref_description="SGN-E337576 [cTOE-11-B3]">
      <seq>ccagtagtcatatgcttgtctcaaagattaagccatgcatgtgtaagtatgaacaaattcagactgtgaaactgcgaatggctcattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcgggctctgcccgttgctgcgatgattcatgataactcgacggatcgcacggccatcgtgccggcgacgcatcattcaaatttctgccctatcaactttcgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="7189" stop="8100"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7489" g_stop="7800" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="312" r_length="312" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E337576" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>312</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337576" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7489" e_stop="7800"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGAT</genome_strand>
        <mrna_strand>CCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E337619" ref_strand="+" ref_description="SGN-E337619 [cTOE-11-P21]">
      <seq>gtagtcatatgcttgtctcaaagattaagccatgcatgtgtaagtatgaacaaattcagactgtgaaactgcgaatggctcattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcgggctctgcccgttgctgcgatgattcatgataactcgacggatcgcacggccatcgtgccggcgacgcatcattcaaatttctgccctatcaactttcgatggtaggatagtggcctaccatggtggtgacgggtgacggagaattagggttcgattccggagagggagcctgagaaacggctaccaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="7192" stop="8188"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7492" g_stop="7888" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="397" r_length="397" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E337619" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>397</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337619" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7492" e_stop="7888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACA</genome_strand>
        <mrna_strand>GTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E336892" ref_strand="+" ref_description="SGN-E336892 [cTOE-5-J3]">
      <seq>tagtcatatgcttgtctcaaagattaagccatgcatgtgtaagtatgaacaaattcagactgtgaaactgcgaatggctcattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcgggctctgcccgttgctgcgatgattcatgataactcgacggatcgcacggccatcgtgccggcgacgcatcattcaaatttctgccctatcaactttcgatggtaggatagtggcctaccatggtggtgacgggtgacggagaattagggttcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagcaggcgcgcaaattacccaatcctgacacggggaggtagtgacaataaataacaataccgggctctatgagtctggtaattggaatgagtacaatctaaatcccttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="7193" stop="8310"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7493" g_stop="8010" g_length="518"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="518" r_length="518" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E336892" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E336892" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7493" e_stop="8010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAA</genome_strand>
        <mrna_strand>TAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E336916" ref_strand="+" ref_description="SGN-E336916 [cTOE-5-L16]">
      <seq>tagtcatatgcttgtctcaaagattaagccatgcatgtgtaagtatgaacaaattcagactgtgaaactgcgaatggctcattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcgggctctgcccgttgctgcgatgattcatgataactcgacggatcgcacggccatcgtgccggcgacgcatcattcaaatttctgccctatcaactttcgatggtaggatagtggcctaccatggtggtgacgggtgacggagaattagggttcgattccggagagggagcctgagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="7193" stop="8176"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7493" g_stop="7876" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E336916" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E336916" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7493" e_stop="7876"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAA</genome_strand>
        <mrna_strand>TAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E337007" ref_strand="+" ref_description="SGN-E337007 [cTOE-20-J3]">
      <seq>tcatatgcttgtctcaaagattaagccatgcatgtgtaagtatgaacaaattcagactgtgaaactgcgaatggctcattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcgggctctgcccgttgctgcgatgattcatgataactcgacggatcgcacggccatcgtgccggctgacgcatcattcaaatttctgccctatcaactttcgatggtaggatagtggcctaccatggtggtgacgggtgacggagaattagggttcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagcaggcgcgcaaattacccaatcctgacacggtgaggtagtgacaataaataacaataccgggctctatgagtctggtaattggaatgagtacaatctaaatcccttaacgaggatccattggagggcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="7196" stop="8332"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7496" g_stop="8032" g_length="537"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="538" r_length="538" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E337007" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337007" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7496" e_stop="8032"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGC-GACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAG</genome_strand>
        <mrna_strand>TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCTGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGTGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E338003" ref_strand="+" ref_description="SGN-E338003 [cTOE-14-E10]">
      <seq>atatgcttgtctcaaagattaagccatgcatgtgtaagtatgaacaaattcagactgtgaaactgcgaatggctcattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcgggctctgcccgttgctgcgatgattcatgataactcgacggatcgcacggccatcgtgccggcgacgcatcattcaaatttctgccctatcaactttcgatggtaggatagtggcctaccatggtggtgacgggtgacggagaattagggttcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagcaggcgcgcaaattacccaatcctgacacggggaggtagtgacaataaataacaataccgggctctatgagtctggtaattggaatgagtacaatctaaatccctttggatcttggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="7198" stop="8308"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7498" g_stop="8008" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="511" r_length="511" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E338003" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E338003" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7498" e_stop="8008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTT</genome_strand>
        <mrna_strand>ATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E336957" ref_strand="+" ref_description="SGN-E336957 [cTOE-5-K16]">
      <seq>tatgcttgtctcaaagattaagccatgcatgtgtaagtatgaacaaattcagactgtgaaactgcgaatggctcattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcgggctctgcccgttgctgcgatgattcatgataactcgacggatcgcacggccatcgtgccggcgacgcatcattcaaatttctgccctatcaactttcgatggtaggatagtggcctacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="7199" stop="8120"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7499" g_stop="7820" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="322" r_length="322" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E336957" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>322</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E336957" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7499" e_stop="7820"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCA</genome_strand>
        <mrna_strand>TATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E337395" ref_strand="+" ref_description="SGN-E337395 [cTOE-18-E24]">
      <seq>cacggccatcgtgccggcgacgcatcattcaaatttctgccctatcaactttcgatggtaggatagtggcctaccatggtggtgacgggtgacggagaattagggttcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagcaggcgcgcaaattacccaatcctgacacggggaggtagtgacaataaataacaataccgggctctatgagtctggtaattggaatgagtacaatctaaatcccttaacgaggatccattggagggcaagtctggtgccagcagccgcggtaattccagctccaatagcgtatatttaagttgttgcagttaaaaagctcgtagttggactttgggatgggccggccggtccgccctaggtgtgcaccggtcgtctcgtcccttctgtcggcgatgcgctcctggccttaattggccgggtcgtgcctccggcgctgttactttgaagaaattagagtgctcaaagcaagcctacgctctgtatacattagcatgggataacattataggatttcggtcctattacgttggccttcgggatcggagtaatgattaacagggacagtcgggggcattcgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="7445" stop="8662"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7745" g_stop="8362" g_length="618"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="618" r_length="618" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E337395" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>618</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337395" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7745" e_stop="8362"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTA</genome_strand>
        <mrna_strand>CACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E337751" ref_strand="+" ref_description="SGN-E337751 [cTOE-17-B21]">
      <seq>ccacatccaaggaaggcagcaggcgcgcaaattacccaatcctgacacggggaggtagtgacaataaataacaataccgggctctatgagtctggtaattggaatgagtacaatctaaatcccttaacgaggatccattggagggcaagtctggtgccagcagccgcggtaattccagctccaatagcgtatatttaagttgttgcagttaaaaagctcgtagttggactttgggatgggccggccggtccgccctaggtgtgcaccggtcgtctcgtcccttctgtcggcgatgcgctcctggccttaattggccgggtcgtgcctccggcgctgttactttgaagaaattagagtgctcaaagcaagcctacgctctgtatacattagcatgggataacattataggatttcggtcctattacgttggccttcgggatcggagtaatgattaacagggacagtcgggggcattcgtatttcatagtcagaggtgaaattcttggatttatgaaagacgaacaactgcgaaagcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="7584" stop="8721"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7884" g_stop="8421" g_length="538"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="538" r_length="538" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E337751" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337751" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7884" e_stop="8421"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATT</genome_strand>
        <mrna_strand>CCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E338035" ref_strand="+" ref_description="SGN-E338035 [cTOE-14-D2]">
      <seq>atgggccggccggtccgccctaggtgtgcaccggtcgtctcgtcccttctgtcggcgatgcgctcctggccttaattggccgggtcgtgcctccggcgctgttactttgaagaaattagagtgctcaaagcaagcctacgctctgtatacattagcatgggataacattataggatttcggtcctattacgttggccttcgggatcggagtaatgattaacagggacagtcgggggcattcgtatttcatagtcagaggtgaaattcttggatttatgaaagacgaacaactgcgaaagcatttgccaaggatgttttcattaatcaagaacgaaagttgggggctcgaagacgatcagataccgtcctagtctcaaccataaacgatgccgaccagggatcggcggatgttgcttttaggactccgccggcaccttatgagaaatcaaagtttttgggttccggggggagtatggtcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="7819" stop="8898"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8119" g_stop="8598" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="480" r_length="480" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E338035" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E338035" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8119" e_stop="8598"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTTTAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGC</genome_strand>
        <mrna_strand>ATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTTTAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E337856" ref_strand="+" ref_description="SGN-E337856 [cTOE-14-A2]">
      <seq>aggtccagacatagtaaggattgacagactgagagctctttcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaactagctatgcggaggtatcccttcgcggccagcttcttagagggactacggccttttaggccgcggaagtttgaggcaataacaggtctgtgatgcccttagatgttctgggccgcacgcgcgctacactgatgtattcaacgagcttatagccttggccgacaggcccgggtaatctttgaaatttcatcgtgatggggatagatcatgcttctagtcccagtgcgccagtatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="8386" stop="9332"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8686" g_stop="9027" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="342" r_length="342" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E337856" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>342</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337856" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8686" e_stop="9027"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTTCGCGGCCAGCTTCTTAGAGGGACTACGGCCTTTTAGGCCGCGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGCTTATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATC</genome_strand>
        <mrna_strand>AGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTTCGCGGCCAGCTTCTTAGAGGGACTACGGCCTTTTAGGCCGCGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGCTTATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E201030" ref_strand="+" ref_description="SGN-E201030 [cLEC-5-H2]">
      <seq>ggaaagcgccaaggaatactacaatcgacagccctccccctcgcgccccgttcgcggatcgtgcggggggaagcgcgctgctctgttaacacaaacgactctcggcaacggatatctcggctctcgcatcgatgaagaacgtagcgaaatgcgatacttggtgtgaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="9109" stop="9877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9409" g_stop="9577" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="169" r_length="169" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E201030" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>169</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E201030" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9409" e_stop="9577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAGCGCCAAGGAATACTACAATCGACAGCCCTCCCCCTCGCGCCCCGTTCGCGGATCGTGCGGGGGGAAGCGCGCTGCTCTGTTAACACAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATT</genome_strand>
        <mrna_strand>GGAAAGCGCCAAGGAATACTACAATCGACAGCCCTCCCCCTCGCGCCCCGTTCGCGGATCGTGCGGGGGGAAGCGCGCTGCTCTGTTAACACAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E545077" ref_strand="+" ref_description="SGN-E545077 [TUS-67-L21](-)">
      <seq>cggcaacggatatctcggctctcgcatcgatgaagaacgtagcgaaatgcgatacttggtgtgaattgcagaatcccgtgaaccatcgagtctttgaacgcaagttgcgcccgaagccatttggccgagggcacgtctgcctgggcgtcacgcatcgcgtcgccccctcgcacgccgcaaggctttagcgcgggggcggaagctggcctcccgtgcgccccgagcgcgcggccggcctaaatgcgagtccacgtcgacggataaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="9211" stop="10071"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9511" g_stop="9772" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="263" polyA_stop="280"/>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E545077" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>262</cumulative_length_of_scored_exons>
        <coverage percentage="0.936" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545077" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9511" e_stop="9772"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCTCGCACGCCGCAAGGCTTTAGCGCGGGGGCGGAAGCTGGCCTCCCGTGCGCCCCGAGCGCGCGGCCGGCCTAAATGCGAGTCCACGTCGACGGAC</genome_strand>
        <mrna_strand>CGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCTCGCACGCCGCAAGGCTTTAGCGCGGGGGCGGAAGCTGGCCTCCCGTGCGCCCCGAGCGCGCGGCCGGCCTAAATGCGAGTCCACGTCGACGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E545078" ref_strand="+" ref_description="SGN-E545078 [TUS-67-L21]">
      <seq>cggcaacggatatctcggctctcgcatcgatgaagaacgtagcgaaatgcgatacttggtgtgaattgcagaatcccgtgaaccatcgagtctttgaacgcaagttgcgcccgaagccatttggccgagggcacgtctgcctgggcgtcacgcatcgcgtcgccccctcgcacgccgcaaggctttagcgcgggggcggaagctggcctcccgtgcgccccgagcgcgcggccggcctaaatgcgagtccacgtcgacggataaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="9211" stop="10071"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9511" g_stop="9772" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="262" r_length="262" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="263" polyA_stop="280"/>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E545078" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>262</cumulative_length_of_scored_exons>
        <coverage percentage="0.936" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545078" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9511" e_stop="9772"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCTCGCACGCCGCAAGGCTTTAGCGCGGGGGCGGAAGCTGGCCTCCCGTGCGCCCCGAGCGCGCGGCCGGCCTAAATGCGAGTCCACGTCGACGGAC</genome_strand>
        <mrna_strand>CGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCTCGCACGCCGCAAGGCTTTAGCGCGGGGGCGGAAGCTGGCCTCCCGTGCGCCCCGAGCGCGCGGCCGGCCTAAATGCGAGTCCACGTCGACGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E309675" ref_strand="+" ref_description="SGN-E309675 [cLEY-26-C15]">
      <seq>ggcaacggatatctcggctctcgcatcgatgaagaacgtagcgaaatgcgatacttggtgtgaattgcagaatcccgtgaaccatcgagtctttgaacgcaagttgcgcccgaagccatttggccgagggcacgtctgcctgggcgtcacgcatcgcgtcgccccctcgcacgccgcaaggctttagcgcgggggcggaagctggcctcccgtgcgccccgagcgcgcggccggcctaaatgcgagtccacgtcgacggataaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="9212" stop="10071"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9512" g_stop="9772" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="261" r_length="261" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="262" polyA_stop="279"/>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E309675" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>261</cumulative_length_of_scored_exons>
        <coverage percentage="0.935" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E309675" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9512" e_stop="9772"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCTCGCACGCCGCAAGGCTTTAGCGCGGGGGCGGAAGCTGGCCTCCCGTGCGCCCCGAGCGCGCGGCCGGCCTAAATGCGAGTCCACGTCGACGGAC</genome_strand>
        <mrna_strand>GGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCTCGCACGCCGCAAGGCTTTAGCGCGGGGGCGGAAGCTGGCCTCCCGTGCGCCCCGAGCGCGCGGCCGGCCTAAATGCGAGTCCACGTCGACGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E297777" ref_strand="+" ref_description="SGN-E297777 [cLET-38-K10]">
      <seq>ggcaacggatatctcggctctcgcatcgatgaagaacgtagcgaaatgcgatacttggtgtgaattgcagaatcccgtgaaccatcgagtctttgaacgcaagttgcgcccgaagccatttggccgagggcacgtctgcctgggcgtcacgcatcgcgtcgaaaattaaagaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="9212" stop="9972"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9512" g_stop="9671" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E297777" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>160</cumulative_length_of_scored_exons>
        <coverage percentage="0.909" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E297777" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9512" e_stop="9671"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTC</genome_strand>
        <mrna_strand>GGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E244039" ref_strand="+" ref_description="SGN-E244039 [cLEE-1-D5]">
      <seq>gcccgacgtcgctcgaacgtgtgtgctgcccaaaggcgatgatgacatgccacgcccgacgtcgttcgaccgtgtgtgctgcccaaaggcgtattttgcagtccacgcccgttcggcgcaggcctttgcagatgccgcctggccgcggacgtgctgcgtacgcagacccatttgccccttgacatctaacttggctttaataatcgcacccgacatcccgaaaacctcttacagtgacatgtcattagtcccttaacatgtcattaggcttgataaatgaactcaacttcacgaaaaactcgcaatggggctcagaacgcatagctcaacacttagcggcagactagtgaacttcacttgccgtgttacttttgaaacttatatttcaacacttagttattttttcctcttcgaaggatgcaggcagcacgcgaacctcacatttgaaaagttagaaatgattggatttgattttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="-" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="14070" stop="12995"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13770" g_stop="13295" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="476" r_length="476" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="-" ref_id="SGN-E244039" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244039" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13770" e_stop="13295"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCGACGTCGCTCGAACGTGTGTGCTGCCCAAAGGCGATGATGACATGCCACGCCCGACGTCGTTCGACCGTGTGTGCTGCCCAAAGGCGTATTTTGCAGTCCACGCCCGTTCGGCGCAGGCCTTTGCAGATGCCGCCTGGCCGCGGACGTGCTGCGTACGCAGACCCATTTGCCCCTTGACATCTAACTTGGCTTTAATAATCGCACCCGACATCCCGAAAACCTCTTACAGTGACATGTCATTAGTCCCTTAACATGTCATTAGGCTTGATAAATGAACTCAACTTCACGAAAAACTCGCAATGGGGCTCAGAACGCATAGCTCAACACTTAGCGGCAGACTAGTGAACTTCACTTGCCGTGTTACTTTTGAAACTTATATTTCAACACTTAGTTATTTTTTCCTCTTCGAAGGATGCAGGCAGCACGCGAACCTCACATTTGAAAAGTTAGAAATGATTGGATTTGATTTTG</genome_strand>
        <mrna_strand>GCCCGACGTCGCTCGAACGTGTGTGCTGCCCAAAGGCGATGATGACATGCCACGCCCGACGTCGTTCGACCGTGTGTGCTGCCCAAAGGCGTATTTTGCAGTCCACGCCCGTTCGGCGCAGGCCTTTGCAGATGCCGCCTGGCCGCGGACGTGCTGCGTACGCAGACCCATTTGCCCCTTGACATCTAACTTGGCTTTAATAATCGCACCCGACATCCCGAAAACCTCTTACAGTGACATGTCATTAGTCCCTTAACATGTCATTAGGCTTGATAAATGAACTCAACTTCACGAAAAACTCGCAATGGGGCTCAGAACGCATAGCTCAACACTTAGCGGCAGACTAGTGAACTTCACTTGCCGTGTTACTTTTGAAACTTATATTTCAACACTTAGTTATTTTTTCCTCTTCGAAGGATGCAGGCAGCACGCGAACCTCACATTTGAAAAGTTAGAAATGATTGGATTTGATTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E578247" ref_strand="+" ref_description="SGN-E578247 [LE12BC08]">
      <seq>tttttttttttcgatattttccctattttttattaatttattactaatttttcggaattttcgaaaaaaataaaaattaaaaaaaattgttgaaaaatatttttttatacatattaaagtcaattatgaaggctgatgtgtgtttgtaccttagaccgcgcatatttgggttgtacattttcattatgattctctggaaaatccatgtctactcctgtcacatgggcaaaacttttttaagcatatataaggggggtagaggtgttggaggcagactgaggcgcaggcaggcagacggcataggcgtcccgtgggcttagcaggcgtgctgcgtgggcgcttgatggcatgcatggcttgtccgtgctacgccgttgggcgtttacaaaaacacgttggcgacgtcgacgggtcgagtgggcaacggcaggcggacgccgagggcgtcctgtgggcttagtaggcgtgctgcgtgggcgcttgatggcatgcatggctcgtccgtgctacgtcgttgggcgtctacaaaaacatgctagcgacgtttgcggggcaactgaagcgaaggcaggcggacgtcgagggcgtcctgtgggcttagtaggcgtgctgcgtgggcgcttgacggcatgcatggctcgtccgtgctacgccgttgggcgtttacaaaacacgcctgcgacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="13981" stop="15262"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14278" g_stop="14962" g_length="685"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="684" r_length="684" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E578247" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>685</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E578247" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14278" e_stop="14962"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATATTTTTTCGATATTTTCCCTATTTTTTATTAATTTATTACTAATTTTTTGGAATTTTTGAAAAAAATAAAAATCAAAAAAAATTGTTGAAAAATATTTTTTTATACATATTAAAGTCAATTATGAAGGCTGATGTGTGTTTGTACCTTAGACCGCGCATATTTGGGTTGTACATTTTCATTATGATTCTCTGGAAAATCCATGTCTACTCCTGTCACATGGGCAAAACTTTTTTAAGCATATATAAGGGGGGTAGAGGTGTTGGAGGCAGACTGAGGCGCAGGCAGGCAGACGGCATAGGCGTCCCGTGGGCTTAGCAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTTGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGTCGGCGACGTCGACGGGTCGAGTGGGCAACGGCAGGCGGACGCCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTCGTCCGTGCTACGTCGTTGGGCGTCTACAAAAACATGCTAGCGACGTTTGCGGGGCAACTGAAGCGAAGGCAGGCGGACGTCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGACGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGCCCGCGACG</genome_strand>
        <mrna_strand>TTTTTTTTTTTCGATATTTTCCCTATTTTTTATTAATTTATTACTAATTTTTCGGAATTTTCGAAAAAAATAAAAATTAAAAAAAATTGTTGAAAAATATTTTTTTATACATATTAAAGTCAATTATGAAGGCTGATGTGTGTTTGTACCTTAGACCGCGCATATTTGGGTTGTACATTTTCATTATGATTCTCTGGAAAATCCATGTCTACTCCTGTCACATGGGCAAAACTTTTTTAAGCATATATAAGGGGGGTAGAGGTGTTGGAGGCAGACTGAGGCGCAGGCAGGCAGACGGCATAGGCGTCCCGTGGGCTTAGCAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTTGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGTTGGCGACGTCGACGGGTCGAGTGGGCAACGGCAGGCGGACGCCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTCGTCCGTGCTACGTCGTTGGGCGTCTACAAAAACATGCTAGCGACGTTTGCGGGGCAACTGAAGCGAAGGCAGGCGGACGTCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGACGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGTTTAC-AAAACACGCCTGCGACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E337576" ref_strand="+" ref_description="SGN-E337576 [cTOE-11-B3]">
      <seq>ccagtagtcatatgcttgtctcaaagattaagccatgcatgtgtaagtatgaacaaattcagactgtgaaactgcgaatggctcattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcgggctctgcccgttgctgcgatgattcatgataactcgacggatcgcacggccatcgtgccggcgacgcatcattcaaatttctgccctatcaactttcgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="15932" stop="16843"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16232" g_stop="16543" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="312" r_length="312" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E337576" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>312</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337576" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16232" e_stop="16543"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGAT</genome_strand>
        <mrna_strand>CCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E337619" ref_strand="+" ref_description="SGN-E337619 [cTOE-11-P21]">
      <seq>gtagtcatatgcttgtctcaaagattaagccatgcatgtgtaagtatgaacaaattcagactgtgaaactgcgaatggctcattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcgggctctgcccgttgctgcgatgattcatgataactcgacggatcgcacggccatcgtgccggcgacgcatcattcaaatttctgccctatcaactttcgatggtaggatagtggcctaccatggtggtgacgggtgacggagaattagggttcgattccggagagggagcctgagaaacggctaccaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="15935" stop="16931"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16235" g_stop="16631" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="397" r_length="397" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E337619" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>397</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337619" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16235" e_stop="16631"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACA</genome_strand>
        <mrna_strand>GTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E336892" ref_strand="+" ref_description="SGN-E336892 [cTOE-5-J3]">
      <seq>tagtcatatgcttgtctcaaagattaagccatgcatgtgtaagtatgaacaaattcagactgtgaaactgcgaatggctcattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcgggctctgcccgttgctgcgatgattcatgataactcgacggatcgcacggccatcgtgccggcgacgcatcattcaaatttctgccctatcaactttcgatggtaggatagtggcctaccatggtggtgacgggtgacggagaattagggttcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagcaggcgcgcaaattacccaatcctgacacggggaggtagtgacaataaataacaataccgggctctatgagtctggtaattggaatgagtacaatctaaatcccttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="15936" stop="17053"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16236" g_stop="16753" g_length="518"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="518" r_length="518" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E336892" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E336892" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16236" e_stop="16753"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAA</genome_strand>
        <mrna_strand>TAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E336916" ref_strand="+" ref_description="SGN-E336916 [cTOE-5-L16]">
      <seq>tagtcatatgcttgtctcaaagattaagccatgcatgtgtaagtatgaacaaattcagactgtgaaactgcgaatggctcattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcgggctctgcccgttgctgcgatgattcatgataactcgacggatcgcacggccatcgtgccggcgacgcatcattcaaatttctgccctatcaactttcgatggtaggatagtggcctaccatggtggtgacgggtgacggagaattagggttcgattccggagagggagcctgagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="15936" stop="16919"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16236" g_stop="16619" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E336916" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E336916" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16236" e_stop="16619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAA</genome_strand>
        <mrna_strand>TAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E337007" ref_strand="+" ref_description="SGN-E337007 [cTOE-20-J3]">
      <seq>tcatatgcttgtctcaaagattaagccatgcatgtgtaagtatgaacaaattcagactgtgaaactgcgaatggctcattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcgggctctgcccgttgctgcgatgattcatgataactcgacggatcgcacggccatcgtgccggctgacgcatcattcaaatttctgccctatcaactttcgatggtaggatagtggcctaccatggtggtgacgggtgacggagaattagggttcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagcaggcgcgcaaattacccaatcctgacacggtgaggtagtgacaataaataacaataccgggctctatgagtctggtaattggaatgagtacaatctaaatcccttaacgaggatccattggagggcaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="15939" stop="17075"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16239" g_stop="16775" g_length="537"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="538" r_length="538" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E337007" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337007" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16239" e_stop="16775"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGC-GACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAG</genome_strand>
        <mrna_strand>TCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCTGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGTGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E338003" ref_strand="+" ref_description="SGN-E338003 [cTOE-14-E10]">
      <seq>atatgcttgtctcaaagattaagccatgcatgtgtaagtatgaacaaattcagactgtgaaactgcgaatggctcattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcgggctctgcccgttgctgcgatgattcatgataactcgacggatcgcacggccatcgtgccggcgacgcatcattcaaatttctgccctatcaactttcgatggtaggatagtggcctaccatggtggtgacgggtgacggagaattagggttcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagcaggcgcgcaaattacccaatcctgacacggggaggtagtgacaataaataacaataccgggctctatgagtctggtaattggaatgagtacaatctaaatccctttggatcttggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="15941" stop="17051"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16241" g_stop="16751" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="511" r_length="511" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E338003" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E338003" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16241" e_stop="16751"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTT</genome_strand>
        <mrna_strand>ATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E336957" ref_strand="+" ref_description="SGN-E336957 [cTOE-5-K16]">
      <seq>tatgcttgtctcaaagattaagccatgcatgtgtaagtatgaacaaattcagactgtgaaactgcgaatggctcattaaatcagttatagtttgtttgatggtatctactactcggataaccgtagtaattctagagctaatacgtgcaacaaaccccgacttctggaagggatgcatttattagataaaaggtcgacgcgggctctgcccgttgctgcgatgattcatgataactcgacggatcgcacggccatcgtgccggcgacgcatcattcaaatttctgccctatcaactttcgatggtaggatagtggcctacca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="15942" stop="16863"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16242" g_stop="16563" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="322" r_length="322" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E336957" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>322</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E336957" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16242" e_stop="16563"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCA</genome_strand>
        <mrna_strand>TATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E337395" ref_strand="+" ref_description="SGN-E337395 [cTOE-18-E24]">
      <seq>cacggccatcgtgccggcgacgcatcattcaaatttctgccctatcaactttcgatggtaggatagtggcctaccatggtggtgacgggtgacggagaattagggttcgattccggagagggagcctgagaaacggctaccacatccaaggaaggcagcaggcgcgcaaattacccaatcctgacacggggaggtagtgacaataaataacaataccgggctctatgagtctggtaattggaatgagtacaatctaaatcccttaacgaggatccattggagggcaagtctggtgccagcagccgcggtaattccagctccaatagcgtatatttaagttgttgcagttaaaaagctcgtagttggactttgggatgggccggccggtccgccctaggtgtgcaccggtcgtctcgtcccttctgtcggcgatgcgctcctggccttaattggccgggtcgtgcctccggcgctgttactttgaagaaattagagtgctcaaagcaagcctacgctctgtatacattagcatgggataacattataggatttcggtcctattacgttggccttcgggatcggagtaatgattaacagggacagtcgggggcattcgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="16188" stop="17405"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16488" g_stop="17105" g_length="618"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="618" r_length="618" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E337395" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>618</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337395" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16488" e_stop="17105"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTA</genome_strand>
        <mrna_strand>CACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E337751" ref_strand="+" ref_description="SGN-E337751 [cTOE-17-B21]">
      <seq>ccacatccaaggaaggcagcaggcgcgcaaattacccaatcctgacacggggaggtagtgacaataaataacaataccgggctctatgagtctggtaattggaatgagtacaatctaaatcccttaacgaggatccattggagggcaagtctggtgccagcagccgcggtaattccagctccaatagcgtatatttaagttgttgcagttaaaaagctcgtagttggactttgggatgggccggccggtccgccctaggtgtgcaccggtcgtctcgtcccttctgtcggcgatgcgctcctggccttaattggccgggtcgtgcctccggcgctgttactttgaagaaattagagtgctcaaagcaagcctacgctctgtatacattagcatgggataacattataggatttcggtcctattacgttggccttcgggatcggagtaatgattaacagggacagtcgggggcattcgtatttcatagtcagaggtgaaattcttggatttatgaaagacgaacaactgcgaaagcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="16327" stop="17464"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16627" g_stop="17164" g_length="538"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="538" r_length="538" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E337751" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>538</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337751" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16627" e_stop="17164"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATT</genome_strand>
        <mrna_strand>CCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E338035" ref_strand="+" ref_description="SGN-E338035 [cTOE-14-D2]">
      <seq>atgggccggccggtccgccctaggtgtgcaccggtcgtctcgtcccttctgtcggcgatgcgctcctggccttaattggccgggtcgtgcctccggcgctgttactttgaagaaattagagtgctcaaagcaagcctacgctctgtatacattagcatgggataacattataggatttcggtcctattacgttggccttcgggatcggagtaatgattaacagggacagtcgggggcattcgtatttcatagtcagaggtgaaattcttggatttatgaaagacgaacaactgcgaaagcatttgccaaggatgttttcattaatcaagaacgaaagttgggggctcgaagacgatcagataccgtcctagtctcaaccataaacgatgccgaccagggatcggcggatgttgcttttaggactccgccggcaccttatgagaaatcaaagtttttgggttccggggggagtatggtcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="16562" stop="17641"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16862" g_stop="17341" g_length="480"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="480" r_length="480" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E338035" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E338035" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16862" e_stop="17341"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTTTAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGC</genome_strand>
        <mrna_strand>ATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTTTAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato" ref_id="SGN-E337856" ref_strand="+" ref_description="SGN-E337856 [cTOE-14-A2]">
      <seq>aggtccagacatagtaaggattgacagactgagagctctttcttgattctatgggtggtggtgcatggccgttcttagttggtggagcgatttgtctggttaattccgttaacgaacgagacctcagcctgctaactagctatgcggaggtatcccttcgcggccagcttcttagagggactacggccttttaggccgcggaagtttgaggcaataacaggtctgtgatgcccttagatgttctgggccgcacgcgcgctacactgatgtattcaacgagcttatagccttggccgacaggcccgggtaatctttgaaatttcatcgtgatggggatagatcatgcttctagtcccagtgcgccagtatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0089P21-LMDbm/GenomeThreader_SGN_E_tomato/un_xed_seqs" temp_id="C02SLe0089P21.1" temp_strand="+" temp_description="C02SLe0089P21.1  AC215459.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0089P21 sequenced_by:kribb upload_account_name:korea">
        <position start="17129" stop="17795"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17429" g_stop="17795" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="362" r_length="362" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0089P21.1" gen_strand="+" ref_id="SGN-E337856" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>367</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0089P21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E337856" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17429" e_stop="17795"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTTCGCGGCCAGCTTCTTAGAGGGACTACGGCCTTTTAGGCCGCGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGCTTATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAG</genome_strand>
        <mrna_strand>AGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTTCGCGGCCAGCTTCTTAGAGGGACTACGGCCTTTTAGGCCGCGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGCTTATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATCA-TGC--TT-CTAGTC-CCAGTGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>40</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="351" PGL_stop="714"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="351" e_stop="714"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="351" e_stop="714" e_length="364"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="351" stop="519"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201030" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="453" stop="714"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545077" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="453" stop="714"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545078" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="454" stop="714"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309675" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="454" stop="613"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297777" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAAAGCGCCAAGGAATACTACAATCGACAGCCCTCCCCCTCGCGCCCCGTTCGCGGATCGTGCGGGGGGAAGCGCGCTGCTCTGTTAACACAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCTCGCACGCCGCAAGGCTTTAGCGCGGGGGCGGAAGCTGGCCTCCCGTGCGCCCCGAGCGCGCGGCCGGCCTAAATGCGAGTCCACGTCGACGGAC</gDNA_template>
            <first_frame> G  K  R  Q  G  I  L  Q  S  T  A  L  P  L  A  P  R  S  R  I  V  R  G  E  A  R  C  S  V  N  T  N  D  S  R  Q  R  I  S  R  L  S  H  R  *  R  T  *  R  N  A  I  L  G  V  N  C  R  I  P  *  T  I  E  S  L  N  A  S  C  A  R  S  H  L  A  E  G  T  S  A  W  A  S  R  I  A  S  P  P  R  T  P  Q  G  F  S  A  G  A  E  A  G  L  P  C  A  P  S  A  R  P  A  *  M  R  V  H  V  D  G  </first_frame>
            <second_frame>  E  S  A  K  E  Y  Y  N  R  Q  P  S  P  S  R  P  V  R  G  S  C  G  G  K  R  A  A  L  L  T  Q  T  T  L  G  N  G  Y  L  G  S  R  I  D  E  E  R  S  E  M  R  Y  L  V  *  I  A  E  S  R  E  P  S  S  L  *  T  Q  V  A  P  E  A  I  W  P  R  A  R  L  P  G  R  H  A  S  R  R  P  L  A  R  R  K  A  L  A  R  G  R  K  L  A  S  R  A  P  R  A  R  G  R  P  K  C  E  S  T  S  T  D </second_frame>
            <third_frame>   K  A  P  R  N  T  T  I  D  S  P  P  P  R  A  P  F  A  D  R  A  G  G  S  A  L  L  C  *  H  K  R  L  S  A  T  D  I  S  A  L  A  S  M  K  N  V  A  K  C  D  T  W  C  E  L  Q  N  P  V  N  H  R  V  F  E  R  K  L  R  P  K  P  F  G  R  G  H  V  C  L  G  V  T  H  R  V  A  P  S  H  A  A  R  L  *  R  G  G  G  S  W  P  P  V  R  P  E  R  A  A  G  L  N  A  S  P  R  R  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="440" stop="640"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HKRLSATDISALASMKNVAKCDTWCELQNPVNHRVFERKLRPKPFGRGHVCLGVTHRVAPSHAARL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="1657" PGL_stop="2053"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1657" e_stop="2053"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="1657" e_stop="2053" e_length="397"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1657" stop="2017"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337107" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1689" stop="2053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337304" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGCGTGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCCTCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTTGTTGAGCCGCGCCACGGAATCAAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCAAACTGCGCGCTAACCTAGATCCCACAAAGGGTGTTGGTCGAT</gDNA_template>
            <first_frame> L  S  G  A  K  P  E  E  T  L  V  E  A  R  S  D  T  D  V  Q  I  V  R  L  T  W  V  *  G  R  K  T  N  R  T  V  *  *  L  V  P  S  E  V  S  L  R  I  A  G  A  R  V  R  V  L  S  G  K  A  N  D  *  R  P  R  G  R  N  A  L  D  L  F  S  N  F  K  *  V  G  R  R  G  C  F  V  E  P  R  H  G  I  K  S  S  K  W  A  I  F  G  K  Q  N  W  R  C  G  M  N  R  K  P  G  Y  G  A  K  L  R  A  N  L  D  P  T  K  G  V  G  R  </first_frame>
            <second_frame>  *  A  G  R  S  Q  R  K  L  W  W  R  P  A  A  I  L  T  C  K  S  F  V  *  L  G  Y  R  G  E  R  L  I  E  P  S  S  S  W  F  P  P  K  F  P  S  G  *  L  E  L  A  C  E  F  Y  R  V  K  P  M  I  R  G  L  G  G  A  T  P  S  T  Y  S  Q  T  L  N  R  *  D  G  A  A  A  L  L  S  R  A  T  E  S  R  A  P  S  G  P  F  L  V  S  R  T  G  D  A  G  *  T  G  S  R  V  T  V  P  N  C  A  L  T  *  I  P  Q  R  V  L  V  D </second_frame>
            <third_frame>   E  R  G  E  A  R  G  N  S  G  G  G  P  Q  R  Y  *  R  A  N  R  S  S  D  L  G  I  G  A  K  D  *  S  N  R  L  V  A  G  S  L  R  S  F  P  Q  D  S  W  S  S  R  A  S  S  I  G  *  S  Q  *  L  E  A  S  G  A  Q  R  P  R  P  I  L  K  L  *  I  G  R  T  A  R  L  L  C  *  A  A  P  R  N  Q  E  L  Q  V  G  H  F  W  *  A  E  L  A  M  R  D  E  P  E  A  G  L  R  C  Q  T  A  R  *  P  R  S  H  K  G  C  W  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0089P21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="5221" PGL_stop="4237"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5221" e_stop="4237"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="5221" e_stop="4237" e_length="985"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5221" stop="4657"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368589" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5221" stop="4757"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243494" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4712" stop="4237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244039" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGTTATGCATGGAGGTTGTTTCAAAATCCTTTGATTTATGTACGCCATGAACATCCGCATGTTTTGTTTGGAACTCGATGAATGTTGCGCAAGCCACGACCGATGCGGGCAGGCCACGGCCGACCGTTGTGTGCAGGCACGTCCGACGACGGCCGACCGTTTGTGCTGTCCAAGGGCTATGATGGCATGCCACGCCCGACGACGGCCGACCGTCTATGCTGTCAAAGGGCGAAGATGGCATGCCACGCCCGACGACGGCCGACCGTCTATGCTGTCAAAGGGCGAAGATGGCATGCCACGCCCGACGTCGTTCGACCGTGTGTGCTGCAAAAAGGCGAAGATGGCATGCCACGCCAGACGCCGTTCGACCGTGTGTGCCCAAAGGCGATGATGGCATGCCACGCCCGACGTCGCTCGACCGTGTGTGCTGCCCAAAGGCGATGGTGGCATGCCACGCCCGACGTCGTTCGACCGTTTGTACTGCCCAAAGGCGATGATGGCATGCCACGCCCGACGTCGCTCGAACGTGTGTGCTGCCCAAAGGCGATGATGACATGCCACGCCCGACGTCGTTCGACCGTGTGTGCTGCCCAAAGGCGTATTTTGCAGTCCACGCCCGTTCGGCGCAGGCCTTTGCAGATGCCGCCTGGCCGCGGACGTGCTGCGTACGCAGACCCATTTGCCCCTTGACATCTAACTTGGCTTTAATAATCGCACCCGACATCCCGAAAACCTCTTACAGTGACATGTCATTAGTCCCTTAACATGTCATTAGGCTTGATAAATGAACTCAACTTCACGAAAAACTCGCAATGGGGCTCAGAACGCATAGCTCAACACTTAGCGGCAGACTAGTGAACTTCACTTGCCGTGTTACTTTTGAAACTTATATTTCAACACTTAGTTATTTTTTCCTCTTCGAAGGATGCAGGCAGCACGCGAACCTCACATTTGAAAAGTTAGAAATGATTGGATTTGATTTTG</gDNA_template>
            <first_frame> L  L  C  M  E  V  V  S  K  S  F  D  L  C  T  P  *  T  S  A  C  F  V  W  N  S  M  N  V  A  Q  A  T  T  D  A  G  R  P  R  P  T  V  V  C  R  H  V  R  R  R  P  T  V  C  A  V  Q  G  L  *  W  H  A  T  P  D  D  G  R  P  S  M  L  S  K  G  E  D  G  M  P  R  P  T  T  A  D  R  L  C  C  Q  R  A  K  M  A  C  H  A  R  R  R  S  T  V  C  A  A  K  R  R  R  W  H  A  T  P  D  A  V  R  P  C  V  P  K  G  D  D  G  M  P  R  P  T  S  L  D  R  V  C  C  P  K  A  M  V  A  C  H  A  R  R  R  S  T  V  C  T  A  Q  R  R  *  W  H  A  T  P  D  V  A  R  T  C  V  L  P  K  G  D  D  D  M  P  R  P  T  S  F  D  R  V  C  C  P  K  A  Y  F  A  V  H  A  R  S  A  Q  A  F  A  D  A  A  W  P  R  T  C  C  V  R  R  P  I  C  P  L  T  S  N  L  A  L  I  I  A  P  D  I  P  K  T  S  Y  S  D  M  S  L  V  P  *  H  V  I  R  L  D  K  *  T  Q  L  H  E  K  L  A  M  G  L  R  T  H  S  S  T  L  S  G  R  L  V  N  F  T  C  R  V  T  F  E  T  Y  I  S  T  L  S  Y  F  F  L  F  E  G  C  R  Q  H  A  N  L  T  F  E  K  L  E  M  I  G  F  D  F  </first_frame>
            <second_frame>  C  Y  A  W  R  L  F  Q  N  P  L  I  Y  V  R  H  E  H  P  H  V  L  F  G  T  R  *  M  L  R  K  P  R  P  M  R  A  G  H  G  R  P  L  C  A  G  T  S  D  D  G  R  P  F  V  L  S  K  G  Y  D  G  M  P  R  P  T  T  A  D  R  L  C  C  Q  R  A  K  M  A  C  H  A  R  R  R  P  T  V  Y  A  V  K  G  R  R  W  H  A  T  P  D  V  V  R  P  C  V  L  Q  K  G  E  D  G  M  P  R  Q  T  P  F  D  R  V  C  P  K  A  M  M  A  C  H  A  R  R  R  S  T  V  C  A  A  Q  R  R  W  W  H  A  T  P  D  V  V  R  P  F  V  L  P  K  G  D  D  G  M  P  R  P  T  S  L  E  R  V  C  C  P  K  A  M  M  T  C  H  A  R  R  R  S  T  V  C  A  A  Q  R  R  I  L  Q  S  T  P  V  R  R  R  P  L  Q  M  P  P  G  R  G  R  A  A  Y  A  D  P  F  A  P  *  H  L  T  W  L  *  *  S  H  P  T  S  R  K  P  L  T  V  T  C  H  *  S  L  N  M  S  L  G  L  I  N  E  L  N  F  T  K  N  S  Q  W  G  S  E  R  I  A  Q  H  L  A  A  D  *  *  T  S  L  A  V  L  L  L  K  L  I  F  Q  H  L  V  I  F  S  S  S  K  D  A  G  S  T  R  T  S  H  L  K  S  *  K  *  L  D  L  I  L </second_frame>
            <third_frame>   V  M  H  G  G  C  F  K  I  L  *  F  M  Y  A  M  N  I  R  M  F  C  L  E  L  D  E  C  C  A  S  H  D  R  C  G  Q  A  T  A  D  R  C  V  Q  A  R  P  T  T  A  D  R  L  C  C  P  R  A  M  M  A  C  H  A  R  R  R  P  T  V  Y  A  V  K  G  R  R  W  H  A  T  P  D  D  G  R  P  S  M  L  S  K  G  E  D  G  M  P  R  P  T  S  F  D  R  V  C  C  K  K  A  K  M  A  C  H  A  R  R  R  S  T  V  C  A  Q  R  R  *  W  H  A  T  P  D  V  A  R  P  C  V  L  P  K  G  D  G  G  M  P  R  P  T  S  F  D  R  L  Y  C  P  K  A  M  M  A  C  H  A  R  R  R  S  N  V  C  A  A  Q  R  R  *  *  H  A  T  P  D  V  V  R  P  C  V  L  P  K  G  V  F  C  S  P  R  P  F  G  A  G  L  C  R  C  R  L  A  A  D  V  L  R  T  Q  T  H  L  P  L  D  I  *  L  G  F  N  N  R  T  R  H  P  E  N  L  L  Q  *  H  V  I  S  P  L  T  C  H  *  A  *  *  M  N  S  T  S  R  K  T  R  N  G  A  Q  N  A  *  L  N  T  *  R  Q  T  S  E  L  H  L  P  C  Y  F  *  N  L  Y  F  N  T  *  L  F  F  P  L  R  R  M  Q  A  A  R  E  P  H  I  *  K  V  R  N  D  W  I  *  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5139" stop="4531"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>606</number_coding_nucleotides>
                  <number_encoded_amino_acids>202</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MLRKPRPMRAGHGRPLCAGTSDDGRPFVLSKGYDGMPRPTTADRLCCQRAKMACHARRRPTVYAVKGRRWHATPDVVRPCVLQKGEDGMPRQTPFDRVCPKAMMACHARRRSTVCAAQRRWWHATPDVVRPFVLPKGDDGMPRPTSLERVCCPKAMMTCHARRRSTVCAAQRRILQSTPVRRRPLQMPPGRGRAAYADPFAP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4432" stop="4238"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TQLHEKLAMGLRTHSSTLSGRLVNFTCRVTFETYISTLSYFFLFEGCRQHANLTFEKLEMIGFDF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="5535" PGL_stop="6219"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5535" e_stop="6219"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="5535" e_stop="6219" e_length="685"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5535" stop="6219"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578247" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCATATTTTTTCGATATTTTCCCTATTTTTTATTAATTTATTACTAATTTTTTGGAATTTTTGAAAAAAATAAAAATCAAAAAAAATTGTTGAAAAATATTTTTTTATACATATTAAAGTCAATTATGAAGGCTGATGTGTGTTTGTACCTTAGACCGCGCATATTTGGGTTGTACATTTTCATTATGATTCTCTGGAAAATCCATGTCTACTCCTGTCACATGGGCAAAACTTTTTTAAGCATATATAAGGGGGGTAGAGGTGTTGGAGGCAGACTGAGGCGCAGGCAGGCAGACGGCATAGGCGTCCCGTGGGCTTAGCAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTTGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGTCGGCGACGTCGACGGGTCGAGTGGGCAACGGCAGGCGGACGCCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTCGTCCGTGCTACGTCGTTGGGCGTCTACAAAAACATGCTAGCGACGTTTGCGGGGCAACTGAAGCGAAGGCAGGCGGACGTCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGACGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGCCCGCGACG</gDNA_template>
            <first_frame> S  Y  F  F  D  I  F  P  I  F  Y  *  F  I  T  N  F  L  E  F  L  K  K  I  K  I  K  K  N  C  *  K  I  F  F  Y  T  Y  *  S  Q  L  *  R  L  M  C  V  C  T  L  D  R  A  Y  L  G  C  T  F  S  L  *  F  S  G  K  S  M  S  T  P  V  T  W  A  K  L  F  *  A  Y  I  R  G  V  E  V  L  E  A  D  *  G  A  G  R  Q  T  A  *  A  S  R  G  L  S  R  R  A  A  W  A  L  D  G  M  H  G  L  S  V  L  R  R  W  A  F  T  K  T  R  R  R  R  R  R  V  E  W  A  T  A  G  G  R  R  G  R  P  V  G  L  V  G  V  L  R  G  R  L  M  A  C  M  A  R  P  C  Y  V  V  G  R  L  Q  K  H  A  S  D  V  C  G  A  T  E  A  K  A  G  G  R  R  G  R  P  V  G  L  V  G  V  L  R  G  R  L  T  A  C  M  A  R  P  C  Y  A  V  G  R  L  Q  K  H  A  R  D  </first_frame>
            <second_frame>  H  I  F  S  I  F  S  L  F  F  I  N  L  L  L  I  F  W  N  F  *  K  K  *  K  S  K  K  I  V  E  K  Y  F  F  I  H  I  K  V  N  Y  E  G  *  C  V  F  V  P  *  T  A  H  I  W  V  V  H  F  H  Y  D  S  L  E  N  P  C  L  L  L  S  H  G  Q  N  F  F  K  H  I  *  G  G  *  R  C  W  R  Q  T  E  A  Q  A  G  R  R  H  R  R  P  V  G  L  A  G  V  L  R  G  R  L  M  A  C  M  A  C  P  C  Y  A  V  G  R  L  Q  K  H  V  G  D  V  D  G  S  S  G  Q  R  Q  A  D  A  E  G  V  L  W  A  *  *  A  C  C  V  G  A  *  W  H  A  W  L  V  R  A  T  S  L  G  V  Y  K  N  M  L  A  T  F  A  G  Q  L  K  R  R  Q  A  D  V  E  G  V  L  W  A  *  *  A  C  C  V  G  A  *  R  H  A  W  L  V  R  A  T  P  L  G  V  Y  K  N  T  P  A  T </second_frame>
            <third_frame>   I  F  F  R  Y  F  P  Y  F  L  L  I  Y  Y  *  F  F  G  I  F  E  K  N  K  N  Q  K  K  L  L  K  N  I  F  L  Y  I  L  K  S  I  M  K  A  D  V  C  L  Y  L  R  P  R  I  F  G  L  Y  I  F  I  M  I  L  W  K  I  H  V  Y  S  C  H  M  G  K  T  F  L  S  I  Y  K  G  G  R  G  V  G  G  R  L  R  R  R  Q  A  D  G  I  G  V  P  W  A  *  Q  A  C  C  V  G  A  *  W  H  A  W  L  V  R  A  T  P  L  G  V  Y  K  N  T  S  A  T  S  T  G  R  V  G  N  G  R  R  T  P  R  A  S  C  G  L  S  R  R  A  A  W  A  L  D  G  M  H  G  S  S  V  L  R  R  W  A  S  T  K  T  C  *  R  R  L  R  G  N  *  S  E  G  R  R  T  S  R  A  S  C  G  L  S  R  R  A  A  W  A  L  D  G  M  H  G  S  S  V  L  R  R  W  A  F  T  K  T  R  P  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5838" stop="6218"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>381</number_coding_nucleotides>
                  <number_encoded_amino_acids>127</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASRGLSRRAAWALDGMHGLSVLRRWAFTKTRRRRRRVEWATAGGRRGRPVGLVGVLRGRLMACMARPCYVVGRLQKHASDVCGATEAKAGGRRGRPVGLVGVLRGRLTACMARPCYAVGRLQKHARD</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5582" stop="5854"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFGIFEKNKNQKKLLKNIFLYILKSIMKADVCLYLRPRIFGLYIFIMILWKIHVYSCHMGKTFLSIYKGGRGVGGRLRRRQADGIGVPWA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="7489" PGL_stop="8598"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7489" e_stop="8598"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7489" e_stop="8598" e_length="1110"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7489" stop="7800"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7492" stop="7888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337619" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7493" stop="8010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336892" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7493" stop="7876"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336916" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7496" stop="8032"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337007" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7498" stop="8008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7499" stop="7820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336957" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7745" stop="8362"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7884" stop="8421"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337751" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8119" stop="8598"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338035" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTTTAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGC</gDNA_template>
            <first_frame> P  V  V  I  C  L  S  Q  R  L  S  H  A  C  V  S  M  N  K  F  R  L  *  N  C  E  W  L  I  K  S  V  I  V  C  L  M  V  S  T  T  R  I  T  V  V  I  L  E  L  I  R  A  T  N  P  D  F  W  K  G  C  I  Y  *  I  K  G  R  R  G  L  C  P  L  L  R  *  F  M  I  T  R  R  I  A  R  P  S  C  R  R  R  I  I  Q  I  S  A  L  S  T  F  D  G  R  I  V  A  Y  H  G  G  D  G  *  R  R  I  R  V  R  F  R  R  G  S  L  R  N  G  Y  H  I  Q  G  R  Q  Q  A  R  K  L  P  N  P  D  T  G  R  *  *  Q  *  I  T  I  P  G  S  M  S  L  V  I  G  M  S  T  I  *  I  P  *  R  G  S  I  G  G  Q  V  W  C  Q  Q  P  R  *  F  Q  L  Q  *  R  I  F  K  L  L  Q  L  K  S  S  *  L  D  F  G  M  G  R  P  V  R  P  R  C  A  P  V  V  S  S  L  L  S  A  M  R  S  W  P  *  L  A  G  S  C  L  R  R  C  Y  F  E  E  I  R  V  L  K  A  S  L  R  S  V  Y  I  S  M  G  *  H  Y  R  I  S  V  L  L  R  W  P  S  G  S  E  *  *  L  T  G  T  V  G  G  I  R  I  S  *  S  E  V  K  F  L  D  L  *  K  T  N  N  C  E  S  I  C  Q  G  C  F  H  *  S  R  T  K  V  G  G  S  K  T  I  R  Y  R  P  S  L  N  H  K  R  C  R  P  G  I  G  G  C  C  F  *  D  S  A  G  T  L  *  E  I  K  V  F  G  F  R  G  E  Y  G  R </first_frame>
            <second_frame>  Q  *  S  Y  A  C  L  K  D  *  A  M  H  V  *  V  *  T  N  S  D  C  E  T  A  N  G  S  L  N  Q  L  *  F  V  *  W  Y  L  L  L  G  *  P  *  *  F  *  S  *  Y  V  Q  Q  T  P  T  S  G  R  D  A  F  I  R  *  K  V  D  A  G  S  A  R  C  C  D  D  S  *  *  L  D  G  S  H  G  H  R  A  G  D  A  S  F  K  F  L  P  Y  Q  L  S  M  V  G  *  W  P  T  M  V  V  T  G  D  G  E  L  G  F  D  S  G  E  G  A  *  E  T  A  T  T  S  K  E  G  S  R  R  A  N  Y  P  I  L  T  R  G  G  S  D  N  K  *  Q  Y  R  A  L  *  V  W  *  L  E  *  V  Q  S  K  S  L  N  E  D  P  L  E  G  K  S  G  A  S  S  R  G  N  S  S  S  N  S  V  Y  L  S  C  C  S  *  K  A  R  S  W  T  L  G  W  A  G  R  S  A  L  G  V  H  R  S  S  R  P  F  C  R  R  C  A  P  G  L  N  W  P  G  R  A  S  G  A  V  T  L  K  K  L  E  C  S  K  Q  A  Y  A  L  Y  T  L  A  W  D  N  I  I  G  F  R  S  Y  Y  V  G  L  R  D  R  S  N  D  *  Q  G  Q  S  G  A  F  V  F  H  S  Q  R  *  N  S  W  I  Y  E  R  R  T  T  A  K  A  F  A  K  D  V  F  I  N  Q  E  R  K  L  G  A  R  R  R  S  D  T  V  L  V  S  T  I  N  D  A  D  Q  G  S  A  D  V  A  F  R  T  P  P  A  P  Y  E  K  S  K  F  L  G  S  G  G  S  M  V   </second_frame>
            <third_frame>   S  S  H  M  L  V  S  K  I  K  P  C  M  C  K  Y  E  Q  I  Q  T  V  K  L  R  M  A  H  *  I  S  Y  S  L  F  D  G  I  Y  Y  S  D  N  R  S  N  S  R  A  N  T  C  N  K  P  R  L  L  E  G  M  H  L  L  D  K  R  S  T  R  A  L  P  V  A  A  M  I  H  D  N  S  T  D  R  T  A  I  V  P  A  T  H  H  S  N  F  C  P  I  N  F  R  W  *  D  S  G  L  P  W  W  *  R  V  T  E  N  *  G  S  I  P  E  R  E  P  E  K  R  L  P  H  P  R  K  A  A  G  A  Q  I  T  Q  S  *  H  G  E  V  V  T  I  N  N  N  T  G  L  Y  E  S  G  N  W  N  E  Y  N  L  N  P  L  T  R  I  H  W  R  A  S  L  V  P  A  A  A  V  I  P  A  P  I  A  Y  I  *  V  V  A  V  K  K  L  V  V  G  L  W  D  G  P  A  G  P  P  *  V  C  T  G  R  L  V  P  S  V  G  D  A  L  L  A  L  I  G  R  V  V  P  P  A  L  L  L  *  R  N  *  S  A  Q  S  K  P  T  L  C  I  H  *  H  G  I  T  L  *  D  F  G  P  I  T  L  A  F  G  I  G  V  M  I  N  R  D  S  R  G  H  S  Y  F  I  V  R  G  E  I  L  G  F  M  K  D  E  Q  L  R  K  H  L  P  R  M  F  S  L  I  K  N  E  S  W  G  L  E  D  D  Q  I  P  S  *  S  Q  P  *  T  M  P  T  R  D  R  R  M  L  L  L  G  L  R  R  H  L  M  R  N  Q  S  F  W  V  P  G  G  V  W  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8096" stop="8338"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KARSWTLGWAGRSALGVHRSSRPFCRRCAPGLNWPGRASGAVTLKKLECSKQAYALYTLAWDNIIGFRSYYVGLRDRSND*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7578" stop="7805"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISYSLFDGIYYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVAAMIHDNSTDRTAIVPATHHSNFCPINFRW*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8381" stop="8596"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSWIYERRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVAFRTPPAPYEKSKFLGSGGSMV</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8292" stop="8489"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DFGPITLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="8686" PGL_stop="9027"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8686" e_stop="9027"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="8686" e_stop="9027" e_length="342"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8686" stop="9027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337856" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTTCGCGGCCAGCTTCTTAGAGGGACTACGGCCTTTTAGGCCGCGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGCTTATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATC</gDNA_template>
            <first_frame> R  S  R  H  S  K  D  *  Q  T  E  S  S  F  L  I  L  W  V  V  V  H  G  R  S  *  L  V  E  R  F  V  W  L  I  P  L  T  N  E  T  S  A  C  *  L  A  M  R  R  Y  P  F  A  A  S  F  L  E  G  L  R  P  F  R  P  R  K  F  E  A  I  T  G  L  *  C  P  *  M  F  W  A  A  R  A  L  H  *  C  I  Q  R  A  Y  S  L  G  R  Q  A  R  V  I  F  E  I  S  S  *  W  G  *  I </first_frame>
            <second_frame>  G  P  D  I  V  R  I  D  R  L  R  A  L  S  *  F  Y  G  W  W  C  M  A  V  L  S  W  W  S  D  L  S  G  *  F  R  *  R  T  R  P  Q  P  A  N  *  L  C  G  G  I  P  S  R  P  A  S  *  R  D  Y  G  L  L  G  R  G  S  L  R  Q  *  Q  V  C  D  A  L  R  C  S  G  P  H  A  R  Y  T  D  V  F  N  E  L  I  A  L  A  D  R  P  G  *  S  L  K  F  H  R  D  G  D  R   </second_frame>
            <third_frame>   V  Q  T  *  *  G  L  T  D  *  E  L  F  L  D  S  M  G  G  G  A  W  P  F  L  V  G  G  A  I  C  L  V  N  S  V  N  E  R  D  L  S  L  L  T  S  Y  A  E  V  S  L  R  G  Q  L  L  R  G  T  T  A  F  *  A  A  E  V  *  G  N  N  R  S  V  M  P  L  D  V  L  G  R  T  R  A  T  L  M  Y  S  T  S  L  *  P  W  P  T  G  P  G  N  L  *  N  F  I  V  M  G  I  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0089P21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="9409" PGL_stop="9772"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9409" e_stop="9772"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="9409" e_stop="9772" e_length="364"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9409" stop="9577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201030" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9511" stop="9772"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545077" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9511" stop="9772"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545078" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9512" stop="9772"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309675" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9512" stop="9671"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297777" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAAAGCGCCAAGGAATACTACAATCGACAGCCCTCCCCCTCGCGCCCCGTTCGCGGATCGTGCGGGGGGAAGCGCGCTGCTCTGTTAACACAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAGCCATTTGGCCGAGGGCACGTCTGCCTGGGCGTCACGCATCGCGTCGCCCCCTCGCACGCCGCAAGGCTTTAGCGCGGGGGCGGAAGCTGGCCTCCCGTGCGCCCCGAGCGCGCGGCCGGCCTAAATGCGAGTCCACGTCGACGGAC</gDNA_template>
            <first_frame> G  K  R  Q  G  I  L  Q  S  T  A  L  P  L  A  P  R  S  R  I  V  R  G  E  A  R  C  S  V  N  T  N  D  S  R  Q  R  I  S  R  L  S  H  R  *  R  T  *  R  N  A  I  L  G  V  N  C  R  I  P  *  T  I  E  S  L  N  A  S  C  A  R  S  H  L  A  E  G  T  S  A  W  A  S  R  I  A  S  P  P  R  T  P  Q  G  F  S  A  G  A  E  A  G  L  P  C  A  P  S  A  R  P  A  *  M  R  V  H  V  D  G  </first_frame>
            <second_frame>  E  S  A  K  E  Y  Y  N  R  Q  P  S  P  S  R  P  V  R  G  S  C  G  G  K  R  A  A  L  L  T  Q  T  T  L  G  N  G  Y  L  G  S  R  I  D  E  E  R  S  E  M  R  Y  L  V  *  I  A  E  S  R  E  P  S  S  L  *  T  Q  V  A  P  E  A  I  W  P  R  A  R  L  P  G  R  H  A  S  R  R  P  L  A  R  R  K  A  L  A  R  G  R  K  L  A  S  R  A  P  R  A  R  G  R  P  K  C  E  S  T  S  T  D </second_frame>
            <third_frame>   K  A  P  R  N  T  T  I  D  S  P  P  P  R  A  P  F  A  D  R  A  G  G  S  A  L  L  C  *  H  K  R  L  S  A  T  D  I  S  A  L  A  S  M  K  N  V  A  K  C  D  T  W  C  E  L  Q  N  P  V  N  H  R  V  F  E  R  K  L  R  P  K  P  F  G  R  G  H  V  C  L  G  V  T  H  R  V  A  P  S  H  A  A  R  L  *  R  G  G  G  S  W  P  P  V  R  P  E  R  A  A  G  L  N  A  S  P  R  R  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9498" stop="9698"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HKRLSATDISALASMKNVAKCDTWCELQNPVNHRVFERKLRPKPFGRGHVCLGVTHRVAPSHAARL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="13770" PGL_stop="13295"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13770" e_stop="13295"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="13770" e_stop="13295" e_length="476"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13770" stop="13295"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244039" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCCCGACGTCGCTCGAACGTGTGTGCTGCCCAAAGGCGATGATGACATGCCACGCCCGACGTCGTTCGACCGTGTGTGCTGCCCAAAGGCGTATTTTGCAGTCCACGCCCGTTCGGCGCAGGCCTTTGCAGATGCCGCCTGGCCGCGGACGTGCTGCGTACGCAGACCCATTTGCCCCTTGACATCTAACTTGGCTTTAATAATCGCACCCGACATCCCGAAAACCTCTTACAGTGACATGTCATTAGTCCCTTAACATGTCATTAGGCTTGATAAATGAACTCAACTTCACGAAAAACTCGCAATGGGGCTCAGAACGCATAGCTCAACACTTAGCGGCAGACTAGTGAACTTCACTTGCCGTGTTACTTTTGAAACTTATATTTCAACACTTAGTTATTTTTTCCTCTTCGAAGGATGCAGGCAGCACGCGAACCTCACATTTGAAAAGTTAGAAATGATTGGATTTGATTTTG</gDNA_template>
            <first_frame> A  R  R  R  S  N  V  C  A  A  Q  R  R  *  *  H  A  T  P  D  V  V  R  P  C  V  L  P  K  G  V  F  C  S  P  R  P  F  G  A  G  L  C  R  C  R  L  A  A  D  V  L  R  T  Q  T  H  L  P  L  D  I  *  L  G  F  N  N  R  T  R  H  P  E  N  L  L  Q  *  H  V  I  S  P  L  T  C  H  *  A  *  *  M  N  S  T  S  R  K  T  R  N  G  A  Q  N  A  *  L  N  T  *  R  Q  T  S  E  L  H  L  P  C  Y  F  *  N  L  Y  F  N  T  *  L  F  F  P  L  R  R  M  Q  A  A  R  E  P  H  I  *  K  V  R  N  D  W  I  *  F   </first_frame>
            <second_frame>  P  D  V  A  R  T  C  V  L  P  K  G  D  D  D  M  P  R  P  T  S  F  D  R  V  C  C  P  K  A  Y  F  A  V  H  A  R  S  A  Q  A  F  A  D  A  A  W  P  R  T  C  C  V  R  R  P  I  C  P  L  T  S  N  L  A  L  I  I  A  P  D  I  P  K  T  S  Y  S  D  M  S  L  V  P  *  H  V  I  R  L  D  K  *  T  Q  L  H  E  K  L  A  M  G  L  R  T  H  S  S  T  L  S  G  R  L  V  N  F  T  C  R  V  T  F  E  T  Y  I  S  T  L  S  Y  F  F  L  F  E  G  C  R  Q  H  A  N  L  T  F  E  K  L  E  M  I  G  F  D  F  </second_frame>
            <third_frame>   P  T  S  L  E  R  V  C  C  P  K  A  M  M  T  C  H  A  R  R  R  S  T  V  C  A  A  Q  R  R  I  L  Q  S  T  P  V  R  R  R  P  L  Q  M  P  P  G  R  G  R  A  A  Y  A  D  P  F  A  P  *  H  L  T  W  L  *  *  S  H  P  T  S  R  K  P  L  T  V  T  C  H  *  S  L  N  M  S  L  G  L  I  N  E  L  N  F  T  K  N  S  Q  W  G  S  E  R  I  A  Q  H  L  A  A  D  *  *  T  S  L  A  V  L  L  L  K  L  I  F  Q  H  L  V  I  F  S  S  S  K  D  A  G  S  T  R  T  S  H  L  K  S  *  K  *  L  D  L  I  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13769" stop="13515"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PDVARTCVLPKGDDDMPRPTSFDRVCCPKAYFAVHARSAQAFADAAWPRTCCVRRPICPLTSNLALIIAPDIPKTSYSDMSLVP*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13490" stop="13296"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TQLHEKLAMGLRTHSSTLSGRLVNFTCRVTFETYISTLSYFFLFEGCRQHANLTFEKLEMIGFDF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="14278" PGL_stop="14962"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14278" e_stop="14962"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="14278" e_stop="14962" e_length="685"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14278" stop="14962"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578247" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCATATTTTTTCGATATTTTCCCTATTTTTTATTAATTTATTACTAATTTTTTGGAATTTTTGAAAAAAATAAAAATCAAAAAAAATTGTTGAAAAATATTTTTTTATACATATTAAAGTCAATTATGAAGGCTGATGTGTGTTTGTACCTTAGACCGCGCATATTTGGGTTGTACATTTTCATTATGATTCTCTGGAAAATCCATGTCTACTCCTGTCACATGGGCAAAACTTTTTTAAGCATATATAAGGGGGGTAGAGGTGTTGGAGGCAGACTGAGGCGCAGGCAGGCAGACGGCATAGGCGTCCCGTGGGCTTAGCAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTTGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGTCGGCGACGTCGACGGGTCGAGTGGGCAACGGCAGGCGGACGCCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGATGGCATGCATGGCTCGTCCGTGCTACGTCGTTGGGCGTCTACAAAAACATGCTAGCGACGTTTGCGGGGCAACTGAAGCGAAGGCAGGCGGACGTCGAGGGCGTCCTGTGGGCTTAGTAGGCGTGCTGCGTGGGCGCTTGACGGCATGCATGGCTCGTCCGTGCTACGCCGTTGGGCGTTTACAAAAACACGCCCGCGACG</gDNA_template>
            <first_frame> S  Y  F  F  D  I  F  P  I  F  Y  *  F  I  T  N  F  L  E  F  L  K  K  I  K  I  K  K  N  C  *  K  I  F  F  Y  T  Y  *  S  Q  L  *  R  L  M  C  V  C  T  L  D  R  A  Y  L  G  C  T  F  S  L  *  F  S  G  K  S  M  S  T  P  V  T  W  A  K  L  F  *  A  Y  I  R  G  V  E  V  L  E  A  D  *  G  A  G  R  Q  T  A  *  A  S  R  G  L  S  R  R  A  A  W  A  L  D  G  M  H  G  L  S  V  L  R  R  W  A  F  T  K  T  R  R  R  R  R  R  V  E  W  A  T  A  G  G  R  R  G  R  P  V  G  L  V  G  V  L  R  G  R  L  M  A  C  M  A  R  P  C  Y  V  V  G  R  L  Q  K  H  A  S  D  V  C  G  A  T  E  A  K  A  G  G  R  R  G  R  P  V  G  L  V  G  V  L  R  G  R  L  T  A  C  M  A  R  P  C  Y  A  V  G  R  L  Q  K  H  A  R  D  </first_frame>
            <second_frame>  H  I  F  S  I  F  S  L  F  F  I  N  L  L  L  I  F  W  N  F  *  K  K  *  K  S  K  K  I  V  E  K  Y  F  F  I  H  I  K  V  N  Y  E  G  *  C  V  F  V  P  *  T  A  H  I  W  V  V  H  F  H  Y  D  S  L  E  N  P  C  L  L  L  S  H  G  Q  N  F  F  K  H  I  *  G  G  *  R  C  W  R  Q  T  E  A  Q  A  G  R  R  H  R  R  P  V  G  L  A  G  V  L  R  G  R  L  M  A  C  M  A  C  P  C  Y  A  V  G  R  L  Q  K  H  V  G  D  V  D  G  S  S  G  Q  R  Q  A  D  A  E  G  V  L  W  A  *  *  A  C  C  V  G  A  *  W  H  A  W  L  V  R  A  T  S  L  G  V  Y  K  N  M  L  A  T  F  A  G  Q  L  K  R  R  Q  A  D  V  E  G  V  L  W  A  *  *  A  C  C  V  G  A  *  R  H  A  W  L  V  R  A  T  P  L  G  V  Y  K  N  T  P  A  T </second_frame>
            <third_frame>   I  F  F  R  Y  F  P  Y  F  L  L  I  Y  Y  *  F  F  G  I  F  E  K  N  K  N  Q  K  K  L  L  K  N  I  F  L  Y  I  L  K  S  I  M  K  A  D  V  C  L  Y  L  R  P  R  I  F  G  L  Y  I  F  I  M  I  L  W  K  I  H  V  Y  S  C  H  M  G  K  T  F  L  S  I  Y  K  G  G  R  G  V  G  G  R  L  R  R  R  Q  A  D  G  I  G  V  P  W  A  *  Q  A  C  C  V  G  A  *  W  H  A  W  L  V  R  A  T  P  L  G  V  Y  K  N  T  S  A  T  S  T  G  R  V  G  N  G  R  R  T  P  R  A  S  C  G  L  S  R  R  A  A  W  A  L  D  G  M  H  G  S  S  V  L  R  R  W  A  S  T  K  T  C  *  R  R  L  R  G  N  *  S  E  G  R  R  T  S  R  A  S  C  G  L  S  R  R  A  A  W  A  L  D  G  M  H  G  S  S  V  L  R  R  W  A  F  T  K  T  R  P  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14581" stop="14961"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>381</number_coding_nucleotides>
                  <number_encoded_amino_acids>127</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASRGLSRRAAWALDGMHGLSVLRRWAFTKTRRRRRRVEWATAGGRRGRPVGLVGVLRGRLMACMARPCYVVGRLQKHASDVCGATEAKAGGRRGRPVGLVGVLRGRLTACMARPCYAVGRLQKHARD</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14325" stop="14597"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFGIFEKNKNQKKLLKNIFLYILKSIMKADVCLYLRPRIFGLYIFIMILWKIHVYSCHMGKTFLSIYKGGRGVGGRLRRRQADGIGVPWA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="16232" PGL_stop="17341"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16232" e_stop="17341"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="16232" e_stop="17341" e_length="1110"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16232" stop="16543"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337576" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16235" stop="16631"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337619" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16236" stop="16753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336892" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16236" stop="16619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336916" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16239" stop="16775"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337007" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16241" stop="16751"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16242" stop="16563"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336957" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16488" stop="17105"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337395" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16627" stop="17164"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337751" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16862" stop="17341"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E338035" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACAAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGTATCTACTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTCTGCCCGTTGCTGCGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTATGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACTTTGGGATGGGCCGGCCGGTCCGCCCTAGGTGTGCACCGGTCGTCTCGTCCCTTCTGTCGGCGATGCGCTCCTGGCCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATTATAGGATTTCGGTCCTATTACGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTTTAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGC</gDNA_template>
            <first_frame> P  V  V  I  C  L  S  Q  R  L  S  H  A  C  V  S  M  N  K  F  R  L  *  N  C  E  W  L  I  K  S  V  I  V  C  L  M  V  S  T  T  R  I  T  V  V  I  L  E  L  I  R  A  T  N  P  D  F  W  K  G  C  I  Y  *  I  K  G  R  R  G  L  C  P  L  L  R  *  F  M  I  T  R  R  I  A  R  P  S  C  R  R  R  I  I  Q  I  S  A  L  S  T  F  D  G  R  I  V  A  Y  H  G  G  D  G  *  R  R  I  R  V  R  F  R  R  G  S  L  R  N  G  Y  H  I  Q  G  R  Q  Q  A  R  K  L  P  N  P  D  T  G  R  *  *  Q  *  I  T  I  P  G  S  M  S  L  V  I  G  M  S  T  I  *  I  P  *  R  G  S  I  G  G  Q  V  W  C  Q  Q  P  R  *  F  Q  L  Q  *  R  I  F  K  L  L  Q  L  K  S  S  *  L  D  F  G  M  G  R  P  V  R  P  R  C  A  P  V  V  S  S  L  L  S  A  M  R  S  W  P  *  L  A  G  S  C  L  R  R  C  Y  F  E  E  I  R  V  L  K  A  S  L  R  S  V  Y  I  S  M  G  *  H  Y  R  I  S  V  L  L  R  W  P  S  G  S  E  *  *  L  T  G  T  V  G  G  I  R  I  S  *  S  E  V  K  F  L  D  L  *  K  T  N  N  C  E  S  I  C  Q  G  C  F  H  *  S  R  T  K  V  G  G  S  K  T  I  R  Y  R  P  S  L  N  H  K  R  C  R  P  G  I  G  G  C  C  F  *  D  S  A  G  T  L  *  E  I  K  V  F  G  F  R  G  E  Y  G  R </first_frame>
            <second_frame>  Q  *  S  Y  A  C  L  K  D  *  A  M  H  V  *  V  *  T  N  S  D  C  E  T  A  N  G  S  L  N  Q  L  *  F  V  *  W  Y  L  L  L  G  *  P  *  *  F  *  S  *  Y  V  Q  Q  T  P  T  S  G  R  D  A  F  I  R  *  K  V  D  A  G  S  A  R  C  C  D  D  S  *  *  L  D  G  S  H  G  H  R  A  G  D  A  S  F  K  F  L  P  Y  Q  L  S  M  V  G  *  W  P  T  M  V  V  T  G  D  G  E  L  G  F  D  S  G  E  G  A  *  E  T  A  T  T  S  K  E  G  S  R  R  A  N  Y  P  I  L  T  R  G  G  S  D  N  K  *  Q  Y  R  A  L  *  V  W  *  L  E  *  V  Q  S  K  S  L  N  E  D  P  L  E  G  K  S  G  A  S  S  R  G  N  S  S  S  N  S  V  Y  L  S  C  C  S  *  K  A  R  S  W  T  L  G  W  A  G  R  S  A  L  G  V  H  R  S  S  R  P  F  C  R  R  C  A  P  G  L  N  W  P  G  R  A  S  G  A  V  T  L  K  K  L  E  C  S  K  Q  A  Y  A  L  Y  T  L  A  W  D  N  I  I  G  F  R  S  Y  Y  V  G  L  R  D  R  S  N  D  *  Q  G  Q  S  G  A  F  V  F  H  S  Q  R  *  N  S  W  I  Y  E  R  R  T  T  A  K  A  F  A  K  D  V  F  I  N  Q  E  R  K  L  G  A  R  R  R  S  D  T  V  L  V  S  T  I  N  D  A  D  Q  G  S  A  D  V  A  F  R  T  P  P  A  P  Y  E  K  S  K  F  L  G  S  G  G  S  M  V   </second_frame>
            <third_frame>   S  S  H  M  L  V  S  K  I  K  P  C  M  C  K  Y  E  Q  I  Q  T  V  K  L  R  M  A  H  *  I  S  Y  S  L  F  D  G  I  Y  Y  S  D  N  R  S  N  S  R  A  N  T  C  N  K  P  R  L  L  E  G  M  H  L  L  D  K  R  S  T  R  A  L  P  V  A  A  M  I  H  D  N  S  T  D  R  T  A  I  V  P  A  T  H  H  S  N  F  C  P  I  N  F  R  W  *  D  S  G  L  P  W  W  *  R  V  T  E  N  *  G  S  I  P  E  R  E  P  E  K  R  L  P  H  P  R  K  A  A  G  A  Q  I  T  Q  S  *  H  G  E  V  V  T  I  N  N  N  T  G  L  Y  E  S  G  N  W  N  E  Y  N  L  N  P  L  T  R  I  H  W  R  A  S  L  V  P  A  A  A  V  I  P  A  P  I  A  Y  I  *  V  V  A  V  K  K  L  V  V  G  L  W  D  G  P  A  G  P  P  *  V  C  T  G  R  L  V  P  S  V  G  D  A  L  L  A  L  I  G  R  V  V  P  P  A  L  L  L  *  R  N  *  S  A  Q  S  K  P  T  L  C  I  H  *  H  G  I  T  L  *  D  F  G  P  I  T  L  A  F  G  I  G  V  M  I  N  R  D  S  R  G  H  S  Y  F  I  V  R  G  E  I  L  G  F  M  K  D  E  Q  L  R  K  H  L  P  R  M  F  S  L  I  K  N  E  S  W  G  L  E  D  D  Q  I  P  S  *  S  Q  P  *  T  M  P  T  R  D  R  R  M  L  L  L  G  L  R  R  H  L  M  R  N  Q  S  F  W  V  P  G  G  V  W  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16839" stop="17081"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KARSWTLGWAGRSALGVHRSSRPFCRRCAPGLNWPGRASGAVTLKKLECSKQAYALYTLAWDNIIGFRSYYVGLRDRSND*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16321" stop="16548"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISYSLFDGIYYSDNRSNSRANTCNKPRLLEGMHLLDKRSTRALPVAAMIHDNSTDRTAIVPATHHSNFCPINFRW*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17124" stop="17339"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSWIYERRTTAKAFAKDVFINQERKLGARRRSDTVLVSTINDADQGSADVAFRTPPAPYEKSKFLGSGGSMV</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0089P21.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17035" stop="17232"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DFGPITLAFGIGVMINRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="17429" PGL_stop="17795"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17429" e_stop="17795"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="17429" e_stop="17795" e_length="367"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17429" stop="17795"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337856" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGTCCAGACATAGTAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTTCGCGGCCAGCTTCTTAGAGGGACTACGGCCTTTTAGGCCGCGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGCTTATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAG</gDNA_template>
            <first_frame> R  S  R  H  S  K  D  *  Q  T  E  S  S  F  L  I  L  W  V  V  V  H  G  R  S  *  L  V  E  R  F  V  W  L  I  P  L  T  N  E  T  S  A  C  *  L  A  M  R  R  Y  P  F  A  A  S  F  L  E  G  L  R  P  F  R  P  R  K  F  E  A  I  T  G  L  *  C  P  *  M  F  W  A  A  R  A  L  H  *  C  I  Q  R  A  Y  S  L  G  R  Q  A  R  V  I  F  E  I  S  S  *  W  G  *  I  I  A  I  V  G  L  Q  R  </first_frame>
            <second_frame>  G  P  D  I  V  R  I  D  R  L  R  A  L  S  *  F  Y  G  W  W  C  M  A  V  L  S  W  W  S  D  L  S  G  *  F  R  *  R  T  R  P  Q  P  A  N  *  L  C  G  G  I  P  S  R  P  A  S  *  R  D  Y  G  L  L  G  R  G  S  L  R  Q  *  Q  V  C  D  A  L  R  C  S  G  P  H  A  R  Y  T  D  V  F  N  E  L  I  A  L  A  D  R  P  G  *  S  L  K  F  H  R  D  G  D  R  S  L  Q  L  L  V  F  N  E </second_frame>
            <third_frame>   V  Q  T  *  *  G  L  T  D  *  E  L  F  L  D  S  M  G  G  G  A  W  P  F  L  V  G  G  A  I  C  L  V  N  S  V  N  E  R  D  L  S  L  L  T  S  Y  A  E  V  S  L  R  G  Q  L  L  R  G  T  T  A  F  *  A  A  E  V  *  G  N  N  R  S  V  M  P  L  D  V  L  G  R  T  R  A  T  L  M  Y  S  T  S  L  *  P  W  P  T  G  P  G  N  L  *  N  F  I  V  M  G  I  D  H  C  N  C  W  S  S  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0089P21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 52 chains have been computed
$ 
$ memory statistics:
$ 75456 bytes spliced alignments in total
$ 40 spliced alignments have been stored
$ 1886 bytes was the average size of a spliced alignment
$ 17416 bytes predicted gene locations in total
$ 11 predicted gene locations have been stored
$ 1583 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 52 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 10:54:31
-->
