<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-07-29 04:43:17"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U599792" ref_strand="+" ref_description="SGN-U599792 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>tattgtaanccctactatatgcttaattgtatgtttgcntgantatgattatgtgattgtgataagataaacatgatgaaaatattgaatcccaaatcttgaaaggaaactttaatatacnttattaatgatgatgccttggtata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="12722" stop="13466"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13022" g_stop="13166" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="146" r_length="146" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-U599792" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>145</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U599792" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13022" e_stop="13166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTGTAAACCCTACTATATGCTTAATTGTATGTTTGCATGAATATGATTATGTGATTGTGATAAGAT-AACATGATGAAAATATTGAATCCCAAATATTGAAAAGAAACTTTAATATACATTATTAATGATGATGCCTTGGTATA</genome_strand>
        <mrna_strand>TATTGTAANCCCTACTATATGCTTAATTGTATGTTTGCNTGANTATGATTATGTGATTGTGATAAGATAAACATGATGAAAATATTGAATCCCAAATCTTGAAAGGAAACTTTAATATACNTTATTAATGATGATGCCTTGGTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U593741" ref_strand="-" ref_description="SGN-U593741 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>agtatgtattaagcaatatcataaaattaactaatatccttagcatgcagcatttgcaattaccataacccttggttgcatcaccaagcacatcaatgaggactcacacctcctcatcatacttatttgggaatttagttcattggattgcatatattaacatatttcaagattcatcatatttattcccctcgtgtccttacgtgacactccactcctcaatatactatcctggcaccggaacgtggcacccgatccatattctatcctggtgtcagaacgtgacacccgatccatattctatcctggtgtcggaacgtgacacccgatccatattctatcctggtaccggaacgtggcacccgatccatattctatcctggtgtcggaacgtgacacccgatccatattctatcctggtaccggaacgtggcacccgatcccctaatctcaccactttcgttcatcaagccttcttttataccaaggcatcattattaacaaagtagattagggctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="20127" stop="12828"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19827" g_stop="19594" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="234" r_length="234" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="19593" i_stop="19480" i_length="114">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19479" g_stop="19322" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="392" r_length="158" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="19321" i_stop="13340" i_length="5982">
            <donor d_prob="0.711" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13339" g_stop="13289" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="443" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13288" i_stop="13204" i_length="85">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13203" g_stop="13141" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="505" r_length="62" r_score="0.825"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-U593741" ref_strand="-">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U593741" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="19827" e_stop="19594"/>
          <exon e_start="19479" e_stop="19322"/>
          <exon e_start="13339" e_stop="13289"/>
          <exon e_start="13203" e_stop="13141"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTATGTATTAAGCAATATCATAAAATCAACTAATATCCTTAGCATGCAGCATTTACAGTTACCATAACCCTTGGTTACAACACCAAGCACATCAATGAGGACTCACACCTCCTCATCATACTCATTTGGGAATTTAGTTCATTAGATTGGATATTTTAACATATTTCAAGATTCATTATCTTTATTCCCCTCGTGTCGGTACGTGACACTCCGCTCCTCAATATACTATCCTGGTGTCGGAACGTGACATTCCGATCCTCATATACTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCAGAACGTGATACTCCGATCCACTAATATCATTCTGTAAATCATCAAGCCTTCTCTATTCCAAGGCATCATCAATCCCATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAATGTATATTAAAGTTTCTTTTCAATATTTGGGATTCAATATTTTCATCATGTTATCTTATCACAATCACATAATCATATTCATGCAAACATACAATTAAGCATACAGTAGGGTTTACAATACTACCAATACATATCATTCTCTATTAAGAGTTTACTATGAAAGCATGAAAACCATAACCTACCTCCACCGAAGAATTGAAATCAAGCAAGTTAATCCTCAAAGCTTGGTGTTTTTCCTCTTCTTCTCGATCGTTTCTCTCTCTCCCTTCTTGTTCTTTCTATTTTCTTATTCAAACCCGCTTTCTTTTACCCTAATTAGTATATAATTAAGAATAAAAGATGGCAATAATACCCCACTAATTAACTTAGGGTTACCTCTTTTAACCCCCAAGAATTTGAGTTATTAATATAAACCCACGAAATCTATAATTAAGGAAAGAATAGTCCCAAAACGTCCCTTAAAACGTGTAAGGAAATCCGATTCTGCCTGGGATTTGCGCAACCTGTGACGGGCCGTCGTGCCTGTGACGGGCCGTCGTGCCTGCGACGGTCCGTCCTGCAGGTCGTCGCAAGGTTCAGAGACCCAATATTTCCACCAAGGGTCTGTGACGGTCCGTCACACCTGTGACGGTCCGTCCTGCCATTCCGTCACAAAGTTCAGAGAGTCGATTTTCAGTACCCAATTTCAGATTTTCTAAGTGTTTTGAAACGAGACCCTGCGACGGTCCGTCGTGCCCATGACGTTCCGTCGTGGGGTCCGTCGCTTCTGCCAGTTTTTCCAGAATTGAAGTCTGTTGCTCAAAACGACTAAACGGGTCGTTACATTAGATACCAATTTACCCATCGTTCGTCCCCGAACGATCAAAGGAAGGAAAACAAGGGCGAAAAGGAGTACCTGAATCTGTAAACAGATGTGGGTATTTTTCTCGCATATCCGCCTCCTTCTCCCAAGTGGCTTCTTCAAACGGTCGATTCTTCCATTGCACATTGATGAATGCAATCTCTCTTGACCTCAACTTGCGAACTTCTCTATCTAAAATAGCAACAGGCTCCTCCTCATAAGACAAGTTCTCATCAAGCAAAACTGAATCCCAACGGATAATGTAGTTTCCATCTCCGTGGTATCTTTTCAACATAGACACATGGAATACCGGATGTACTCCGGACAGCCCTGGAGGCAAGGCTAACTCATAAGCCACCTCTCCTACTCGCTTTAGTACTTCAAAGGGACCAATGTACCTTGGACTTAGCTTACCCCTTTTTCCAAATCGCATCACCCCTTTCATTGGCGAAACTTTCAACAAGACTTGTTCACCTTCCATGAACTCTAAGTCTCTAACCTTTCGATCTGCATATTCTTTTTGTCTACTTTGCGCCGCTAACAGCTTTTCTTGAATAGACTTCACTTTTTCCATCGAATCCCTCAAGAGATCAGTACCCCAAGGTCTAACCTCGAATGCATCAAACCAACCAATGGGAGACCTACATCTCCTCCCATATAATGCTTCAAATGGGGTCATATCAATGCTCGAGTGATAGCTATTATTGTATGAAAATTCCGCTAAGGGTAAGAAGCTATCCCAATGGCCACCAAATTCTATCACACACGCACGGAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCGGTCTGGGGATGGAACGCAGTACTAAGGTCCAACCTAGTACCCAATTCAGCATGCAATGTCTTCCAAAACTTAGAAGTAAACTGCGTACCTCTATCTGATATGATGGATAGTGGAACCCCATGCAATCGCACCACTTCCGAGATGTAAAGTTTGGCTAACTTTTCTGCATTGTAAGTCACCTTGACCGGAATGAAATGAGCAGATTTAGTTAACCTATCAACAATCACCCAAATGGAGTCATACTTACCCATTGTCTTCGGAAGACCAACCACAAAATCCATTGCAATTCTTTCCCACTTCCATTCCGGAATGGGCATTCTCTGAAGTGTTCCTCCGGGCCTTTGGTGTTCATACTTTACTTGTTGACAGTTTGGACATTTGGCAATAAAATCCACAATGTCGCGCTTCATTCTACTCCACCAAAAGTGTTGTTTTAGGTCACGATACATCTTGGTTGCACCCGGATGTATAGAATACCTTGAACTATGAGCTTCTGTCAGAATAGTGTTGATCAAATCATCAACACGGGGCACACATACCCTTCCCTTGATTCTCAAAACACCTTCCTCATCGATTTGTGCTTCCTTAGCCTCTCCTCGCAATACCTTATCTTGGATTCTTCTTAGTTTCTCATCATCAAACTGTTTTCCCTTAATTTTGTCAAGAAAAGAAGATCTTGACTCTACAGAAGCCAACAATCCTCCCTTCTCATTTACCTCTAATCTCATCAAGTCATTAGCTAGAGTCTGAACCTCTCTAGCCAAAGGGCGTCTAGAAGTTTGCAAGTGAGCTAGACTTCCCATGCTTCCCGCCTTTCTACTTAAAGCATCCGCTACAACATTCGCCTTCCCCGGATGATACAAAATGGTGATGTCGTAGTCCTTCAGTAGTTCCATCCATCTTCTCTGTCTCAAGTTCAAATCTTTCTGAGTAAAGACATACTGAAGGCTACGATGATCCGTGTAGACCTCACACTTAACCCCATATAAATAGTGTCTCCATTGCTTTAATGCAAACACTACCGCAGCCAATTCCAAATCATGGTTTGGATAGTTACGTTCATGCACTTTTAATTGCCTCGAAGCATAAGCAATCACACTCTTCTCTTGCTTTAGTACTACACCCAAACCCGAATAGGATGCATCACAATAAACAATGAAGTTCTTACCCTCTACTGGCAAGGTAAGGATAGGTGCGGTAGTCAACAAAGTTTTGAGCTTCTGAAAGCTTTCCTCACATTCGTCCGACCATACAAATGGAACATTCTGCTTAGTCAAGTTCGTCAATTGGGAAGCAATAGAAAAGAATCCCTTGACGAATCGACGGTAGTAGCTAGCTAACCCAACAAAGCTCGTTATTTCTAACACATTAGTAGGTCTCACCCAATTCTTCACTGTCTCAATCTTAGAAGGATCCACCATCACTCCATCCTTAGAAACCACGTGTCCCAAGAAGGACACTGCATCTAGCCAAAACTCACACTTAGAGAACTTGGCATAAAGCTTTTTCTCCCTTAACATTTCCAATACCATTCTCAAATGCTCTTCATGTTCCTTCTTGCTCTTTGAGTATACCAATATATCATCAATAAATACGATCACGAAGAGGTCCAAATATGGCTTAAAAATCCCGTTCATCAAGCTCATGAACGCAGCAGGGGCATTCGTAAGACCAAAAGACATCACTACAAATTCGTAATGCCCATACCTCGTTCGAAAAGCAGTCTTTGGCACATCCGTTGCCCATATTTTCAATTGATGATAACCGGATCTCAAGTCAATCTTAGAGAAGACACAAGCACCTTGTAACTGATCGAACAAGTCATCAATGCGGGGAAGAGGATACTTGTTCTTTATGGTTACCTTGTTTAGTTGTCTGTAGTCTATACACATTCGAAAACTCCCATCCTTCTTCTTCACAAACAAAATCGGAGCACCCCAAGGAGATGCACTTGGTCTAATGAAGCCTTTGCTCAACAACTCTTGAAGTTGGGCTTTTAACTCCCTTTCGAAACCTCTTTGATGTCGATGCCATGGTGAATTCATTTGGCTTCACTCCTTCCACCTCTACCACGAAATCTACCACTTCTTGGAAGGATTTTGCAGTAGCCGCTACCTGTAAGGCTGAAATCCGCAACTCTGACCTCAACCCTTTCACAAAACGACGAATCCGCTCTTGTGGACTGAAACAAAGTTGAGTGGCATACCTGGATAGTGCACGGAACTTAGCCTCATAAGCATTAACCGACATGCTACCTTGCTCTAGGCTCAGGAACTCATCCCTTTTCCTATCCCTCAAAGTCCGGGGGATATACTTCTCCATAAACAAGCTAGAGAACGAGGCCCAAGTCATAGGTGGTGCCTCTATTGGTTGACACTCAATATGTGACCGCCACCACATTTTGGCGTTCCCTTGAAACTGATAAGTCACAAACTCCACACCAAACCGTTCTACTATACCCATCTTGTGTAGTAGCTCGTGACAGTCAACCAGAAAATCATAAGCATCCTCCGATTCAGCACCCTTGAAGACTGGAGATTTCAATTTCAAGAACTTACTGAAAAGTTCATGCTGATCACTTGTCATTATAGGCCCAGTAGTCAGACGTGGAAACGTGCCTATTTCCAATGGAACATCCATGCGGGGAGCCATAGTAGCCGCATGTTGTACCTCCGGAGCCTGAGGTGCTGGTGCAGAAAACACTGGGGGTATCTGGCCCTGATCAGATAACCCGCTAAGATTAGCCAGAACCCGATTGATCATCTCTGGGGTAGGTTGGGGTGGCATTTCCTCATTCTGCACTTGTTCATTCACCCCATCCTCCCCCTCTCTTATCACTTCCTCAGTCGGTGGAGGAGTCACCGCCCTAGTACCAGATGGGATCGGTGCTCGTCCTCTTCCTCTAGAGGACGTCCTCCCACGACCTCTACCACGGCCCCTTGCCGCTGTTCTTCCTCGAGCCACAGCCCCAGTGGCTGGCTCAGACGCTTCTTGTCTTGCCGATGTTGGTGTTGGCGCAGTCGTTGCTCTAGTTCTAACCATCCGCGAAATAGAGTGAAGATGGTCAGATACCAATTCGTATCGCCTAGATACCAATTGGACTCAAGTAGTAGCACGAAAGAAAGAATGAAAGAATGGAATTTTCCTAAAGTCTTATAGCCTCTCAAGGAAAAGTAAAGGCATCCCCCTACCGTTCCTTAAGACCCTACTAGACCTGTTCTTGTGTGATGAGACCAACGAACCTAATGCTCTGATACCAAGTTTTGTCACGACCCAAATCCAGGCCGCGACTGGCACCCACACTTACCCTCCTATGTGAGCGAACCAACCAATCTAAACCTTAACATTTCAATGTAATAACAACAGAAAGTAATGCGAAAGACTTAAACTCATTAATAAAAACCAATTCAATAACTATCAATATTCAACATCTATTATTCCCAAAACCTGGAAGTCATCATCACAAGAACATCTACTTTCAACTACTAATTCTAAGAGTTTCTAAGAAGCTAAAAATACATAAGAAGCTAGTCCATGCCGGAAGTTCAAGGCATCAAGACATGAAGGAGAAGATCCAGTCCAAGCTAAAAGCGTTAGCTCACCCTGAAGATCCGGTGTGACGAAGACTGGCTTGAGTTACTGTTGAGTCGAAGATGACGGCACGTTTGCTGCACTCCACAAATAACAACAAGAAAAACATAAAAGTAGGGGTCAGTACAAAACACGGGTACTGAGTAGATATCATCGGCCAACTCAAAATAGAAAACAGTATGTATTAAGCAATATCATAAAATCAACTAATATCCTTAGCATGCAGCATTTACAGTTACCATAACCCTTGGTTACAACACCAAGCACATCAATGAGGACTCACACCTCCTCATCATACTCATTTGGAAATTTAGTTCATTAGATTGGATATTTTAACATATTTCAAGATTCATTATCTTTATTCCCCTCGTGTCGGTACGTGACACTCCGCTCCTCAATATACTATCCTGGTGTCGGAACGTGACATTCCGATCCTCATATACTATCCTGGTACCGGAACGTGGCACCCGATTCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACTCCGATCCACTAATATCATTCTGTAAATCATCAAGCCTTCTCTATTCCAAGGCATCATCAATCCCATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAAT</genome_strand>
        <mrna_strand>AGTATGTATTAAGCAATATCATAAAATTAACTAATATCCTTAGCATGCAGCATTTGCAATTACCATAACCCTTGGTTGCATCACCAAGCACATCAATGAGGACTCACACCTCCTCATCATACTTATTTGGGAATTTAGTTCATTGGATTGCATATATTAACATATTTCAAGATTCATCATATTTATTCCCCTCGTGTCCTTACGTGACACTCCACTCCTCAATATACTATCCTG..................................................................................................................GCACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCAGAACGTGACACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCC.....................................................................................CCT-AATCTCACCACTTTCGTTCATCAAGCCTTCTTTTATACCAAGGCATCATTATTAACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U580377" ref_strand="+" ref_description="SGN-U580377 Tomato 200607#2 [7 ESTs aligned] ">
      <seq>ctaatgaactaaattcccaaatgagtatgatgaggaggtgtgagtcctcattgatgtgcttggtgttgtaaccaagggttatggtaactataaatgctgcatgttaaggatattagttgattttatgatattgcttaatacatactgttccctattttgagttggccgatgatatctactcagtagccgtgttttgtactgacccctacttttatgtttttcttcttgttatttgtggagtgcagcaaacgtgccgtcatcttcgactcaacagtaactcaagccagtcttcgtcacaccggatcttcagggtgagctaacgcttctagcttggactggatcttctccttcatgtcttgatgccttgaacttccggcatggactagcttcttatgtaattttttagcttcttagaaactcttagaattagtagtttaaagtagatgttcttgtgatgatgacttccaggttttgggaataatagatgtttaataatagtagttattgattttattaatgagtttaagtcttccgcattactttctgttgctattacattgaaatgttaaggtttagattggttggttcgctcacataggagggtaagtgtgggtgccagtggcggcccggatttgggtcgtgacaaaacttggtatcagagcattaggttcgttggtctcatcacacaagaacaagtctagtagagtcttaaggaacggtagggggacgcctttacttttccttgagaggctataagactttaggaaaacttcactctttcattctttctttcgtgctactacttgagtccaattggtatctaggcgatacgaattggtatctgaccatcttcactctctttcgcagatggttagaactagagcaacgaccacgtcaacaccaacaccggccagacaagaaacaactgagccagccactggggctgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="13326" stop="14878"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13626" g_stop="14578" g_length="953"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="949" r_length="949" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-U580377" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>953</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U580377" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13626" e_stop="14578"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAATGAACTAAATTTCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTGTAAATGCTGCATGCTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTGTTGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCTTTTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGT-A-TTTTTAGCTTCTTAGAAACTCTTAGAATTAGTAGTTGAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTGAATATTGATAGTTATTGAATTGGTTTTTATTAATGAGTTTAAGTCTTTCGCATTACTTTCTGTTGTTATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCGGCCTGGATTTGGGTCGTGACAAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGGGTCTTAAGGAACGGTAGGGGGATGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAATTCCATTCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACGAATTGGTATCTGACCATCTTCACTCTATTTCGCGGATGGTTAGAACTAGAGCAACGACTGCGCCAACACCAACATCGGCAAGACAAGAAGCGTCTGAGCCAGCCACTGGGGCTGTGG</genome_strand>
        <mrna_strand>CTAATGAACTAAATTCCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTATAAATGCTGCATGTTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTCCCTATTTTGAGTTGGCCGATGATATCTACTCAGTAGCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTCTTGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCTTCTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGTAATTTTTTAGCTTCTTAGAAACTCTTAGAATTAGTAGTTTAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTTAATA---ATAG-TAGT-TATT-GATTTTATTAATGAGTTTAAGTCTTCCGCATTACTTTCTGTTGCTATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTGGCGGCCCGGATTTGGGTCGTGACAAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAAGTCTAGTAGAGTCTTAAGGAACGGTAGGGGGACGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAACTTCACTCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACGAATTGGTATCTGACCATCTTCACTCTCTTTCGCAGATGGTTAGAACTAGAGCAACGACCACGTCAACACCAACACCGGCCAGACAAGAAACAACTGAGCCAGCCACTGGGGCTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U579265" ref_strand="+" ref_description="SGN-U579265 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|86371679|gb|ABC94893.1| (e_value=8e-76) polyprotein; (*SWP) sp|Q99315|YG31B_YEAST (e_value=3e-38) Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY3B-G; ">
      <seq>ccgtgggaggacgtcctcaagaagaagaggacaaacacctagcccatttgatgctagggcggtgactcctccaccgactgaggaagtagtaagagagggtgaggaaggggagaatgaacaagtgcaaaatgaggaattgccaccccaacctaccccagagatgatcaatcaggttctcgcttatcttagtgggttgtctgattagggtcaggcacctctagtgttttctacaccagcacctcagggtccgaaggtacaacatgcggctattgtggctccccgcatggatgccttatcggacataggcacgtttccacatctgattactgggcctataatgataaatgatcagcgtgaaattttcagtaagttcttaaaatttaaacctccagtcttcaagggtgctgaatctgaggatgcttacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagttcgtgagttatgagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacctatgacttgggcatcattctctagcttgtttatggagaagtatatccccccaactttgagggataggaaaagagatgagttcttgagcctagagcaaggtaggatgtcggttactgcatatgaggctaagtttcgtgcattatcaaggtatgccacccaactttgtttcagtccacaagagcggattcgccgttttgtgaaggggttgagatcagagttgcggatttcagccttacaggtagcggctacagcgaaatcctttcaagaagtggtggacttcgtgatagaggtagagggagtgaaaagcccaacttcaagagttgttgagcaaaggcttcattagaccaagtgcatctccttggggtgctccagttttgtttgtgaagaagaaggatgggagttttcggatgtgcatagactaccggcagttgaacaaggtaatcataaagaacaagtatcctcttcctcgcattgatgacttgttcgatcagttacaaggtgcttgtgtcttcactaagattgacttgagatccggttgtcatcaattgaaaatacgggcaacggatgtgccaaagactgcttttagaaccaggtatgggcattacgaatttgtagtgatgtcttttggtcttacgaatgcccctgctgcgttcatgagtttgatgaacgggattttaagccatatttggatctctttgtgatcgtatttattgatgatatactgatatactctaaaagtaaggaggaacatgaggagcatttgagaatggtattggaaatgttgagggagaaaaagctttatgccaagttctctaagtgttagttttggctagatgcagtgtccttcttggggcacgtggtttcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="14317" stop="16406"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14616" g_stop="15488" g_length="873"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="873" r_length="873" r_score="0.907"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15489" i_stop="15542" i_length="54">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15543" g_stop="16106" g_length="564"/>
          <reference_exon_boundary r_type="cDNA" r_start="874" r_stop="1436" r_length="563" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-U579265" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>1437</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U579265" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14616" e_stop="15488"/>
          <exon e_start="15543" e_stop="16106"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTGGGAGGACGTCCTCTAGAGGAAGAGGACGAGCACCGATCCCATCTGGTACTAGGGCGGTGACTCCTCCACCGACTGAGGAAGTGATAAGAGAGGGGGAGGATGGGGTGAATGAACAAGTGCAGAATGAGGAAATGCCACCCCAACCTACCCCAGAGATGATCAATCGGGTTCTGGCTAATCTTAGCGGGTTATCTGATCAGGGCCAGATACCCCCAGTGTTTTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGGCTACTATGGCTCCCCGCATGGATGTTCCATTGGAAATAGGCACGTTTCCACGTCTGACTACTGGGCCTATAATGACAAGTGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAATCTCCAGTCTTCAAGGGTGCTGAATCGGAGGATGCTTATGATTTTCTGGTTGACTGTCACGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTGGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATATTGAGTGTCAACCAATAGAGGCACCACCTATGACTTGGGCCTCGTTCTCTAGCTTGTTTATGGAGAAGTATATCCCCCGGACTTTGAGGGATAGGAAAAGGGATGAGTTCCTGAGCCTAGAGCAAGGTAGCATGTCGGTTAATGCTTATGAGGCTAAGTTCCGTGCACTATCCAGGTATGCCACTCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAAAGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACTGCAAAATCCTTCCAAGAAGTGGTAGATTTCGTGGTAGAGGTGGAAGGAGTGAAGCCAAATGAATTCACCATGGCATCGACATCAAAGAGGTTTCGAAAGGGAGTTAAAAGCCCAACTTCAAGAGTTGTTGAGCAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGATTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTCGAATGTGTATAGACTACAGACAACTAAACAAGGTAACCATAAAGAACAAGTATCCTCTTCCCCGCATTGATGACTTGTTCGATCAGTTACAAGGTGCTTGTGTCTTCTCTAAGATTGACTTGAGATCCGGTTATCATCAATTGAAAATATGGGCAACGGATGTGCCAAAGACTGCTTTTCGAACGAGGTATGGGCATTACGAATTTGTAGTGATGTCTTTTGGTCTTACGAATGCCCCTGCTGCGTTCATGAGCTTGATGAACGGGATTTTTAAGCCATATTTGGACCTCTTCGTGATCGTATTTATTGATGATATATTGGTATACTCAAAGAGCAAGAAGGAACATGAAGAGCATTTGAGAATGGTATTGGAAATGTTAAGGGAGAAAAAGCTTTATGCCAAGTTCTCTAAGTGTGAGTTTTGGCTAGATGCAGTGTCCTTCTTGGGACACGTGGTTTCTA</genome_strand>
        <mrna_strand>CCGTGGGAGGACGTCCTCAAGAAGAAGAGGACAAACACCTAGCCCATTTGATGCTAGGGCGGTGACTCCTCCACCGACTGAGGAAGTAGTAAGAGAGGGTGAGGAAGGGGAGAATGAACAAGTGCAAAATGAGGAATTGCCACCCCAACCTACCCCAGAGATGATCAATCAGGTTCTCGCTTATCTTAGTGGGTTGTCTGATTAGGGTCAGGCACCTCTAGTGTTTTCTACACCAGCACCTCAGGGTCCGAAGGTACAACATGCGGCTATTGTGGCTCCCCGCATGGATGCCTTATCGGACATAGGCACGTTTCCACATCTGATTACTGGGCCTATAATGATAAATGATCAGCGTGAAATTTTCAGTAAGTTCTTAAAATTTAAACCTCCAGTCTTCAAGGGTGCTGAATCTGAGGATGCTTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTCGTGAGTTATGAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCATCATTCTCTAGCTTGTTTATGGAGAAGTATATCCCCCCAACTTTGAGGGATAGGAAAAGAGATGAGTTCTTGAGCCTAGAGCAAGGTAGGATGTCGGTTACTGCATATGAGGCTAAGTTTCGTGCATTATCAAGGTATGCCACCCAACTTTGTTTCAGTCCACAAGAGCGGATTCGCCGTTTTGTGAAGGGGTTGAGATCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACAGCGAAATCCTTTCAAGAAGTGGTGGACTTCGTGATAGAGGTAGAGGGAGTGAA......................................................AAGCCCAACTTCAAGAGTTGTTGAGCAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCAGTTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTCGGATGTGCATAGACTACCGGCAGTTGAACAAGGTAATCATAAAGAACAAGTATCCTCTTCCTCGCATTGATGACTTGTTCGATCAGTTACAAGGTGCTTGTGTCTTCACTAAGATTGACTTGAGATCCGGTTGTCATCAATTGAAAATACGGGCAACGGATGTGCCAAAGACTGCTTTTAGAACCAGGTATGGGCATTACGAATTTGTAGTGATGTCTTTTGGTCTTACGAATGCCCCTGCTGCGTTCATGAGTTTGATGAACGGGA-TTTTAAGCCATATTTGGATCTCTTTGTGATCGTATTTATTGATGATATACTGATATACTCTAAAAGTAAGGAGGAACATGAGGAGCATTTGAGAATGGTATTGGAAATGTTGAGGGAGAAAAAGCTTTATGCCAAGTTCTCTAAGTGTTAGTTTTGGCTAGATGCAGTGTCCTTCTTGGGGCACGTGGTTTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U590648" ref_strand="+" ref_description="SGN-U590648 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|113205316|gb|ABI34339.1| (e_value=2e-17) Polyprotein,; ">
      <seq>gcacctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="14350" stop="15505"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14650" g_stop="15205" g_length="556"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="556" r_length="556" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-U590648" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U590648" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14650" e_stop="15205"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCACCGATCCCATCTGGTACTAGGGCGGTGACTCCTCCACCGACTGAGGAAGTGATAAGAGAGGGGGAGGATGGGGTGAATGAACAAGTGCAGAATGAGGAAATGCCACCCCAACCTACCCCAGAGATGATCAATCGGGTTCTGGCTAATCTTAGCGGGTTATCTGATCAGGGCCAGATACCCCCAGTGTTTTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGGCTACTATGGCTCCCCGCATGGATGTTCCATTGGAAATAGGCACGTTTCCACGTCTGACTACTGGGCCTATAATGACAAGTGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAATCTCCAGTCTTCAAGGGTGCTGAATCGGAGGATGCTTATGATTTTCTGGTTGACTGTCACGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTGGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATATTGAGTGTCAACCAATAGAGGCACCACCTATGACTTGGGCCTCGTTCT</genome_strand>
        <mrna_strand>GCACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U575264" ref_strand="+" ref_description="SGN-U575264 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|113205363|gb|AAT66771.2| (e_value=2e-67) Putative; (*SWP) sp|Q9UR07|RT23_SCHPO (e_value=5e-21) Retrotransposable element Tf2 155 kDa protein type 3 OS=Schizosaccharomyces pombe GN=Tf2-11; ">
      <seq>acccaattccgcatgcaatgttttccaaaacttagaagtaaactgcatacctctatctgatatgatggagagtggaaccccatgcaaccgaacaatttctgagacatatattttggctaacttctctgcattgtaagtcaccttgaccggaatgaaatgagcagacttagttaacctatcaacaatcacccaaatagagtcatacttactcattgtctttggaaggccaactacaaaatccattgcaattctctcccacttccattcaggaatgagcattctctgaagtgttcctccaggcctctggtgttcatactttacttgttgacagtttggacatttggcaataaagtcaacaatatcacgcttcattctactccaccaaaagtgttgctttaggtcacggtacatcttggttgcacccggatgtatagaataccttgaactatgagcctctgtcagaatagtgttgatcaaatcatcaactcggggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="17800" stop="16709"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17500" g_stop="17010" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="491" r_length="491" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-U575264" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U575264" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17500" e_stop="17010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCCAATTCAGCATGCAATGTCTTCCAAAACTTAGAAGTAAACTGCGTACCTCTATCTGATATGATGGATAGTGGAACCCCATGCAATCGCACCACTTCCGAGATGTAAAGTTTGGCTAACTTTTCTGCATTGTAAGTCACCTTGACCGGAATGAAATGAGCAGATTTAGTTAACCTATCAACAATCACCCAAATGGAGTCATACTTACCCATTGTCTTCGGAAGACCAACCACAAAATCCATTGCAATTCTTTCCCACTTCCATTCCGGAATGGGCATTCTCTGAAGTGTTCCTCCGGGCCTTTGGTGTTCATACTTTACTTGTTGACAGTTTGGACATTTGGCAATAAAATCCACAATGTCGCGCTTCATTCTACTCCACCAAAAGTGTTGTTTTAGGTCACGATACATCTTGGTTGCACCCGGATGTATAGAATACCTTGAACTATGAGCTTCTGTCAGAATAGTGTTGATCAAATCATCAACACGGG</genome_strand>
        <mrna_strand>ACCCAATTCCGCATGCAATGTTTTCCAAAACTTAGAAGTAAACTGCATACCTCTATCTGATATGATGGAGAGTGGAACCCCATGCAACCGAACAATTTCTGAGACATATATTTTGGCTAACTTCTCTGCATTGTAAGTCACCTTGACCGGAATGAAATGAGCAGACTTAGTTAACCTATCAACAATCACCCAAATAGAGTCATACTTACTCATTGTCTTTGGAAGGCCAACTACAAAATCCATTGCAATTCTCTCCCACTTCCATTCAGGAATGAGCATTCTCTGAAGTGTTCCTCCAGGCCTCTGGTGTTCATACTTTACTTGTTGACAGTTTGGACATTTGGCAATAAAGTCAACAATATCACGCTTCATTCTACTCCACCAAAAGTGTTGCTTTAGGTCACGGTACATCTTGGTTGCACCCGGATGTATAGAATACCTTGAACTATGAGCCTCTGTCAGAATAGTGTTGATCAAATCATCAACTCGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U599718" ref_strand="+" ref_description="SGN-U599718 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|113205427|gb|ABI34389.1| (e_value=5e-23) Polyprotein,; ">
      <seq>ctacatctcctaccatacaatgcttcaaatggagccatatcaatgcttgattgatagctattattgtatgaaaactccgctaagggtaggaagctatcccaatgaccaccaaactctatcacacacgcacgaagcatattctccaacacttgaatcgttcgctcagactgaccatcgggagaactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="18015" stop="17238"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17715" g_stop="17539" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-U599718" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>177</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U599718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17715" e_stop="17539"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTACATCTCCTCCCATATAATGCTTCAAATGGGGTCATATCAATGCTCGAGTGATAGCTATTATTGTATGAAAATTCCGCTAAGGGTAAGAAGCTATCCCAATGGCCACCAAATTCTATCACACACGCACGGAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</genome_strand>
        <mrna_strand>CTACATCTCCTACCATACAATGCTTCAAATGGAGCCATATCAATGCTTGATTGATAGCTATTATTGTATGAAAACTCCGCTAAGGGTAGGAAGCTATCCCAATGACCACCAAACTCTATCACACACGCACGAAGCATATTCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U585004" ref_strand="+" ref_description="SGN-U585004 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|147792812|emb|CAN68806.1| (e_value=3e-14) hypothetical; ">
      <seq>gacatgatccatttggcggacaaggttttatgctgcctttcggtcctccgatgcagagggaccttgcagcagactttgggatgggatttaatgctggcccaccaatcatgagtagagaagaatttgaggctagaaaggctgatctgagaaggaaacgtgagagcgagagacgtggagagagggagttccctaaagacagggagcatgcaagggatgttgggagcactgctgatggtccttccctgaaacccaaatctaaagctccgtcgagctcgagccgtccccgccaacctgagaggccttccccagaccttgaccaccgcgttgatgaccaccgccgacctgagagaccatcgccagatcttgaccaccgccgccgagctgagaggccatcgccagaccttgaccaccgccgccgatctgagaggccatcgccagaccatgattacccccgccgacctgagaggctgtctccagatcgccgattgcgtgaccctgaacttcctcgcccttcttccaagaaaaagtatgaagattatgacgatcatcaccatgaggaccgccaccgccatgaggaccgccatcagcgcggtacccatcgcagtagcagtagccatcaccgttcagaatcttcagctaacgccaaaccatcctccgtaggcccatctgaaccgcaatccaaatccgttgataagaggaaggccagtgttttttctcgtatcagtttcccagccgaagattcagcagcagcttcaaagaagcgaaaggtgccatcctcgagtgaagtaccagtgagttcttcagcgagccacaggggtggcacaacgaatgggtatcatggggagtacaaaacgactactggatcaaggaagagtgccactgtgagtgtggattacgagagtagtgatgatgatcggcacttcaaaagaaagccttcaaggttgagatagtatatgatgatggggtgactggatcaaaaagaatcttgcatggatataaatacagattcagaatgcgcgggcatctttttaacattcaaatctggatagagtttcctgagtgataccatctacttcacaaagcttctcggtgcaacggtatgagtttttgggttgatccttgaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="29701" stop="25051"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29402" g_stop="29345" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="29344" i_stop="29070" i_length="275">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="29069" g_stop="28947" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="181" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28946" i_stop="28584" i_length="363">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28583" g_stop="28508" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="257" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28507" i_stop="27366" i_length="1142">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27365" g_stop="26683" g_length="683"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="940" r_length="683" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26682" i_stop="25671" i_length="1012">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25670" g_stop="25606" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="941" r_stop="1005" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25605" i_stop="25473" i_length="133">
            <donor d_prob="0.770" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25472" g_stop="25352" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1006" r_stop="1127" r_length="122" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-U585004" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1126</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U585004" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29402" e_stop="29345"/>
          <exon e_start="29069" e_stop="28947"/>
          <exon e_start="28583" e_stop="28508"/>
          <exon e_start="27365" e_stop="26683"/>
          <exon e_start="25670" e_stop="25606"/>
          <exon e_start="25472" e_stop="25352"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACATGATCCATTTGGCGGACAAGGTTTTATGCTGCCTTTCGGTCCTCCGATGCAGAGGTAATAACCTCCATTGTATTTTATTCTAAACTTCTTATGCTGTCTTTCGGTCCTCCAATGCAGAGGTATAACTTCCATTGTATTTTATTCTAAACTTCTCTCTGTTTAATCTCTGATAAGTATTTTCACATGTTTTCGGGTCTCTCTTGCAGTTTCTGATGATGGTCATATATTGTAGTTTAATTACTTCTATATTAGAGTATCTGTATACAAATATGTTGGCGCATTTGCGATTAGTGGTACCTGACTGGATAAAATTGGCCACCAAATTTTAGGGACCTTGCAGCAGACTTTGGGATGGGATTTAATGCTGGCCCACCAATCATGAGTAGAGAAGAATTTGAGGCTAGAAAGGCTGATCTGAGAAGGAAACGTGAGAGCGAGAGACGTGGAGAGAGGTAATTTGACCATTCTTGTTAATTCGTAGCACATTATGGTGCTCTTTCCGTGGGTGATGTTAAATCACATCCAGTGGTCTGAGCACTATGCATTGAGGTTTTGCAAAGAATTTACATGTAGATGATATTGAAATTATGATCACTTGTTGAGCTTTGAGTAGAGGTTTTTGCGCTCTGTTTACTCCTAGTGCTTCCGTATAACTTAGGTTTTCTATACTTGGTAGTCACGTTGCTATCAATTTGCACAATCTATTTATATCCTCCTTAGTAGGTTATTATTGTCAACAGTCATCGTCTTTTCTGCTTCTACTCTTTTGATCACCTTCAATGACAATTTGATAATATATTTGTTATTTTCAGCAGGGAGTTCCCTAAAGACAGGGAGCATGCAAGGGATGTTGGGAGCACTGCTGATGGTCCTTCCCTGAAACCCAAATCTGTATGTATCTTGATCATCAAATATTATAGGCCATTTTGGCCCTATATTTTAGTTGACATGCTGTGTGTGAGGGGAAAAGTTTGGCTTGGTTTAGCCAAGAAGCAGCTAACAGCTAGTTTCCAGTTTCATCTTTCTATTACATGTAAAAGTAAAAAAATCAACAGTATTGGAGACTGAATTTCTTGGATAATTTTCTAAGATCATAAGTACAGGACACATTTCTTTGGATTACCTTGATATCTTGACGATTGAGTGTATTGGAGATCAGTTGCCCATTATGCAAAAAGGGGATATATGACTTTCTACCGTAGTTGGTGCTCCTTTCGAATGCCTGATGTTGCTTGATGGCAAACGATATTGTGGCAGTTTTTTGTTGCCGGGCAGTTGACTGGAGCTCAATTTTTAGGAGCTATCAGAACAGTACCCATTAAGATGTTGGTTTATATTTTTTGTTAGTTCGTTTTTCTGGTTTCTGTTCATTGGATGTGGTGGATGATGATAAGTGATTTTGTTCCCTTATGTACCTCCCTCTTTTTTTAAAAAAATAAACCATTTCCCAACAGCATCGAGATTTGGCTATTGCAGAAACGTTTTATGATGATGTTTGCCTAATTTGACAAAAATGATGAAGTGGATAGGACTCCAGAAGTGTTCTTAAGTCTAGACTTGGAAACAAAAGAATCATTGAGTGGAGTGGGAGATGGTGATGTAAATCATCTTATAACAAAAATGGAGTGGCATTTTACGGGTCCCCATAAATGTACACGAAGGTGTATTGATTTTAAATATTTGCTACACCTCTTAAAATTAAAAGAAAAACCAAGTGCAGAAAAAAGAACTCAAACTGAGGAAATCCTTTTGAAAACTCAACCTGAGTTGAAGAGCCTATTGTTAAGAGTTTTAAATTTCTTGGTTATCAAATAAATAATTAAGGAGATGTAAATTTATTTCTCAAGAAAAATATTTCTTGTAAAATTTAATGTCATCTCCTTTTGTAGTGTGTATTTCCGTCAATGTTATTTTTTTTTTGAATAGCTGTGAATTTCTCATTTCTTTTTATGGCTTTAGACCTGCATTGCATTTTTGACTCTTCTTTGTTTTTGCAATAGTTGATATTAATATGTACATTGATGATTCCACAGAAAGCTCCGTCGAGCTCGAGCCGTCCCCGCCAACCTGAGAGGCCTTCCCCAGACCTTGACCACCGCGTTGATGACCACCGCCGACCTGAGAGACCATCGCCAGATCTTGACCACCGCCGCCGAGCTGAGAGGCCATCGCCAGACCTTGACCACCGCCGCCGATCTGAGAGGCCATCGCCAGACCATGATTACCCCCGCCGACCTGAGAGGCTGTCTCCAGATCGCCGATTGCGTGACCCTGAACTTCCTCGCCCTTCTTCCAAGAAAAAGTATGAAGATTATGACGATCATCACCATGAGGACCGCCACCGCCATGAGGACCGCCATCAGCGCGGTACCCATCGCAGTAGCAGTAGCCATCACCGTTCAGAATCTTCAGCTAACGCCAAACCATCCTCCGTAGGCCCATCTGAACCGCAATCCAAATCCGTTGATAAGAGGAAGGCCAGTGTTTTTTCTCGTATCAGTTTCCCAGCCGAAGATTCAGCAGCAGCTTCAAAGAAGCGAAAGGTGCCATCCTCGAGTGAAGTACCAGTGAGTTCTTCAGCGAGCCACAGGGGTGGCACAACGAATGGGTATCATGGGGAGTACAAAACGACTACTGGATCAAGGAAGAGTGCCACTGTGAGTGTGGATTACGAGAGTAGTGATGATGATCGGCACTTCAAAAGAAAGCCTTCAAGGTACGAACCATCTCCGCCACCAGCTTTTGTAGGGTGGGAAGAAGAGGAGCAGGAGGGGCCTCCTCCTAGGCATAACAAAGGGGACTAGGGGAAGGGGGTAATCTGCATATAAGTTATGTTTGCATTTTTCACATCTTTACTATGTCAATTATTTGCGTTTCACTTGTAGCACTATACTGGGGTATGTTGTTGTTGTTGACTTTCTAATGTGTCAGTTCACCATTTTCTTGGGTTCTTTCCAGCTATTCTGTTGGTAGATTTTGATGCAATACTGTGCAATATTTAGAGTTGAATGTACGTATATTGCTTTGAATCTCTTTTTTGTTTCTCATTTCCTTGTCGTGTCTTCATTTGTGCATTATGTATTAGTTTTACTGTCTTGGCAAAAAAATATGTTACTGGCTTAACTGTCTTAAATGTAGCTTTACTTACCTAGGTTTGTTTATCTAAGGAACACAACAGTTAGGGGCTTATAGTTAATATGAGTCTCGTTTGTCATGCTAACAAAAAAGCATCTGGTTAGTTATGAACATTGTTGGCTTAACCTCTCTGGCAACCTGTCTTATGATATTTATTATAATATATTTCTTTAGCTGGCAGAATTCTGAATGTCAAAATAATTCATGGGAAGGAAGAGAATAAAGAGAAAAATATAGACGTCTCTACTTTGCTTTGTACATATAACTTATCTAGAGGAGCCTGCACAGGTTCACTTGCATGCCTTTTAGTTCGACAGTTGTATGTTAATTTTGTCACCAAGTATTGTGAGTGAGAATATCACTTTGAAGCTTTGATGGGAACAATCTCATATTGTATGTGGCATTATATTCACTTGTATCTCTTTTAAATTGTTGCTAAGTCATTTTTGTTTGAGATGCCAGTGGAGTTCTTTTGTGTGTTTAGCCTCTTCATTATTGAGTACAGCTATCCTTCTACCATTCCTGTCATAGCTTTCATAATGTCCTTGTGGTCCTTTTTCTACGTATGCTTAACTCGTTGGTTCTCGGTGCAGGTTGAGATAGTATATGATGATGGGGTGACTGGATCAAAAAGAATCTTGCATGGATATAAATACAGGTAGAGAGTAGTTCGCTCTTGTTCAGACATTTTTCACATATTTGCCTCAGACAATGCTATTACTCTCACTTACATGCCTTGCTGTTTCACCTCGTTTCGTTTTGAGTTGACATTTTGTTTGATTGGGGTGCAGATTCAGAATGCGCGGGCATCTTTTTAACATTCAAATCTGGATAGAGTTTCCTGAGTGATACCATCTACTTCACAAAGC-TCTCGGTGCAACGGTATGAGTTTTTGGTTTGATCCTTGAGAGA</genome_strand>
        <mrna_strand>GACATGATCCATTTGGCGGACAAGGTTTTATGCTGCCTTTCGGTCCTCCGATGCAGAG...................................................................................................................................................................................................................................................................................GGACCTTGCAGCAGACTTTGGGATGGGATTTAATGCTGGCCCACCAATCATGAGTAGAGAAGAATTTGAGGCTAGAAAGGCTGATCTGAGAAGGAAACGTGAGAGCGAGAGACGTGGAGAGAG...........................................................................................................................................................................................................................................................................................................................................................................GGAGTTCCCTAAAGACAGGGAGCATGCAAGGGATGTTGGGAGCACTGCTGATGGTCCTTCCCTGAAACCCAAATCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGCTCCGTCGAGCTCGAGCCGTCCCCGCCAACCTGAGAGGCCTTCCCCAGACCTTGACCACCGCGTTGATGACCACCGCCGACCTGAGAGACCATCGCCAGATCTTGACCACCGCCGCCGAGCTGAGAGGCCATCGCCAGACCTTGACCACCGCCGCCGATCTGAGAGGCCATCGCCAGACCATGATTACCCCCGCCGACCTGAGAGGCTGTCTCCAGATCGCCGATTGCGTGACCCTGAACTTCCTCGCCCTTCTTCCAAGAAAAAGTATGAAGATTATGACGATCATCACCATGAGGACCGCCACCGCCATGAGGACCGCCATCAGCGCGGTACCCATCGCAGTAGCAGTAGCCATCACCGTTCAGAATCTTCAGCTAACGCCAAACCATCCTCCGTAGGCCCATCTGAACCGCAATCCAAATCCGTTGATAAGAGGAAGGCCAGTGTTTTTTCTCGTATCAGTTTCCCAGCCGAAGATTCAGCAGCAGCTTCAAAGAAGCGAAAGGTGCCATCCTCGAGTGAAGTACCAGTGAGTTCTTCAGCGAGCCACAGGGGTGGCACAACGAATGGGTATCATGGGGAGTACAAAACGACTACTGGATCAAGGAAGAGTGCCACTGTGAGTGTGGATTACGAGAGTAGTGATGATGATCGGCACTTCAAAAGAAAGCCTTCAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGAGATAGTATATGATGATGGGGTGACTGGATCAAAAAGAATCTTGCATGGATATAAATACAG.....................................................................................................................................ATTCAGAATGCGCGGGCATCTTTTTAACATTCAAATCTGGATAGAGTTTCCTGAGTGATACCATCTACTTCACAAAGCTTCTCGGTGCAACGGTATGAGTTTTTGGGTTGATCCTTGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U569218" ref_strand="+" ref_description="SGN-U569218 Tomato 200607#2 [5 ESTs aligned] (*GB) gi|147792812|emb|CAN68806.1| (e_value=6e-97) hypothetical; (*ATH) AT5G47430.1 (e_value=2e-68) | Symbol: None | expressed protein | chr5:19252858-19258448 REVERSE | Aliases: MQL5.29, MQL5_29; ">
      <seq>gggcaaccccagatggttcatatgctttaccaagtggtgccagtgctgttttaaagcccaatgaggctgcttttgaaagagaagttgaagggatgccttctatacgttccgttggtgatcttccacaagagcttcattgtcccttgtgtaaagaagtaatgaaagatgcagtgttgacaagcaagtgttgttttagcagttactgcgataaatgcataagggatcatatcatctcgaagtcggtgtgtgtctgtggggccacaaatatacttgctgatgacctgttacccaacaagactgtgagggatacaattaatagaatattggaatcaaataatagcagtgcagagcatgggggtagtgctctccaagttcaagatatggagtcagcgcgcattctcccaccaaagattccatctccttcacaatctgcagcttcaaggggtgagccgttgccaccaccaccacctcctccacctgttaaggaggaaaattctaaagcccaggagattgcagaagagggtaagaatggcagtgcttctcagcaaatgttggaaagaggaagaactttgaaggttgcagatgtttctgaagctacacacgagtccgtcagtgttaaagaacctgtatccccggggagtgctccattggctgatgaagaggttcagcaaaagcctgtagttggggaggcaggaaaaaaaaagaagaagaaaaaaccccgattgcctttgaaccctgctgctgctgagatgcagtgaaaagctgcacaagatcttgctgctgagaattatatgatgtccatgggtcctgctgcctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="31298" stop="29230"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30999" g_stop="30936" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="64" r_length="64" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30935" i_stop="30860" i_length="76">
            <donor d_prob="0.862" d_score="1.00"/>
            <acceptor a_prob="0.765" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30859" g_stop="30711" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="213" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30710" i_stop="30526" i_length="185">
            <donor d_prob="0.101" d_score="1.00"/>
            <acceptor a_prob="0.738" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30525" g_stop="30361" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="378" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30360" i_stop="30256" i_length="105">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30255" g_stop="29941" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="693" r_length="315" r_score="0.997"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="29940" i_stop="29795" i_length="146">
            <donor d_prob="0.307" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.95"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="29794" g_stop="29753" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="694" r_stop="735" r_length="42" r_score="0.952"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="29752" i_stop="29612" i_length="141">
            <donor d_prob="0.994" d_score="0.95"/>
            <acceptor a_prob="0.987" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="29611" g_stop="29530" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="736" r_stop="818" r_length="83" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-U569218" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>817</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U569218" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30999" e_stop="30936"/>
          <exon e_start="30859" e_stop="30711"/>
          <exon e_start="30525" e_stop="30361"/>
          <exon e_start="30255" e_stop="29941"/>
          <exon e_start="29794" e_stop="29753"/>
          <exon e_start="29611" e_stop="29530"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCAACCCCAGATGGTTCATATGCTTTACCAAGTGGTGCCAGTGCTGTTTTAAAGCCCAATGAGTAAGATTTCGTGTTATGTTGGTATTGCTGTGTCTGCTTGTAACAAGAATGTATATGACTGGCCCACTCGTTGTAGGGCTGCTTTTGAAAGAGAAGTTGAAGGGATGCCTTCTATACGTTCCGTTGGTGATCTTCCACAAGAGCTTCATTGTCCCTTGTGTAAAGAAGTAATGAAAGATGCAGTGTTGACAAGCAAGTGTTGTTTTAGCAGTTACTGCGATAAATGTAAGGAGCAAGCTGTTTAATTTGAGTGTTGTGTTGATTAAGTGTTTTTTCTATAAACGCAAGGAGTTTGCTGTTCAATGTGGGTGTTGTGTTGTAGCTTCTACAGTGAAATTTGGTTTTTTACTATTCAATTTTAGTGTGCCTGTATTCTGGAATTTCAAACTGATTGCAAGGGTGATCCTCAGGCATAAGGGATCATATCATCTCGAAGTCGGTGTGTGTCTGTGGGGCCACAAATATACTTGCTGATGACCTGTTACCCAACAAGACTGTGAGGGATACAATTAATAGAATATTGGAATCAAATAATAGCAGTGCAGAGCATGGGGGTAGTGCTCTCCAAGTTCAAGGTCAGTACCGGTTCTAACTCTCTGAACTGTTCTCTCGTTCAAGTCCATTATCTGCTTGATGTTTTTATTAGGCTTAGGTCTTGCCTTTGTTGTTATATCTTCCAGATATGGAGTCAGCGCGCATTCTCCCACCAAAGATTCCATCTCCTTCACAATCTGCAGCTTCAAGGGGTGAGCCGTTGCCACCACCACCACCTCCTCCACCTGTTAAGGAGGAAAATTCTAAAGCCCAGGAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCGTCAGTGTTAAAGAACCTGTATCCCCGGGGAGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCAGTAGTTGGGGAGGCAGGTAATGGTGCTCTTTCGTTTACCTCTTTGGATTCGCAAGTTATTGTTTTTTTTCTTACCGAGCAGCTTAGAGGAGATGCTTTAGTTTCTTACTTCCCTTGGATCGGGAAGTGTTCTCATCTAGATATTGTTCTTTTATGTTTTCAGGAAAAAAAAAGAAGAAGAAAAAAACACGATTGCCTTTGAACCGTATGTACTCGCTTCCTTTATCTTGTGCACGTATTGATAGATTTGTTAACTATTTTGGAATAAAACTTTGATTATTATGTCTGCATTCTTGATGGAGCTTTGTACACTTCCTAGTTCCTAAATTACTTGGTGCCCTTGCAGCTGCTGCTGCTGAGATGCAGTGGAGAGCTGCACAAGATCTTGCTGCTGAGAATTATATGATGTCCATGGGT-CTGCTGCCTAT</genome_strand>
        <mrna_strand>GGGCAACCCCAGATGGTTCATATGCTTTACCAAGTGGTGCCAGTGCTGTTTTAAAGCCCAATGA............................................................................GGCTGCTTTTGAAAGAGAAGTTGAAGGGATGCCTTCTATACGTTCCGTTGGTGATCTTCCACAAGAGCTTCATTGTCCCTTGTGTAAAGAAGTAATGAAAGATGCAGTGTTGACAAGCAAGTGTTGTTTTAGCAGTTACTGCGATAAAT.........................................................................................................................................................................................GCATAAGGGATCATATCATCTCGAAGTCGGTGTGTGTCTGTGGGGCCACAAATATACTTGCTGATGACCTGTTACCCAACAAGACTGTGAGGGATACAATTAATAGAATATTGGAATCAAATAATAGCAGTGCAGAGCATGGGGGTAGTGCTCTCCAAGTTCAAG.........................................................................................................ATATGGAGTCAGCGCGCATTCTCCCACCAAAGATTCCATCTCCTTCACAATCTGCAGCTTCAAGGGGTGAGCCGTTGCCACCACCACCACCTCCTCCACCTGTTAAGGAGGAAAATTCTAAAGCCCAGGAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCGTCAGTGTTAAAGAACCTGTATCCCCGGGGAGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCTGTAGTTGGGGAGGCAG..................................................................................................................................................GAAAAAAAAAGAAGAAGAAAAAACCCCGATTGCCTTTGAACC.............................................................................................................................................CTGCTGCTGCTGAGATGCAGTGAAAAGCTGCACAAGATCTTGCTGCTGAGAATTATATGATGTCCATGGGTCCTGCTGCCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U585853" ref_strand="+" ref_description="SGN-U585853 Tomato 200607#2 [16 ESTs aligned] (*GB) gi|147792812|emb|CAN68806.1| (e_value=3e-79) hypothetical; (*ATH) AT4G17410.1 (e_value=1e-54) | Symbol: None | expressed protein | chr4:9717226-9721937 FORWARD | Aliases: DL4740W, FCAALL.426; (*SWP) sp|O94264|YORF_SCHPO (e_value=9e-15) Uncharacterized RING finger protein P8B7.15c OS=Schizosaccharomyces pombe GN=SPBP8B7.15c; ">
      <seq>gggcgattggcggccaatcggccgaattgcccgacaatcaatccgtttaaaatccgtggaaaccctagttccggcaccccccataaagctttactcttttggctttcttttcagttttccgttcgatccgcttcggaattcaacggacttttcggcgagttcaccgtgcgcgaagaggaattgacgatttccggtagagaaacctctcctgttatctgaagaattgtcggtcgacgggcggtcggttggtcgtcgctgattggattcgattcaattcaatcgatctgaagaatccggtgttctataaacccatagaaagcttctgagtttatcggatagaatcatcaacctcttcaagggtatccgctaagagagacgcccggcgtgattagatagatcggatcgagatcgtccccagtcgaaggagtagcggtagcagtggtttgattttggttataataagcttgcctttagatattgctgctgacggaagcttgcggattattttgctcgtggaggatgttcctactgatctattggaggaatttggtttgactgattttcttgagttattgaagagaagttgtgagctagaaaaaagagcttttaatatttttgtactttatatcaattttctttgagttcaatatcaggcctattatgattttttgatcggcctcgttgttgttatattgtttttgtttgaggaaaaaaaggaattttaagaaaaaaggagctatgtcagtttattttaagtttaaaagtgcgaaagattatgattcaattccaattgatggtcactttattactgttggtaatttgaaagaaaaaatatttgaatccaagcatctgggcaggggtacagatttcgacctcgttgtcaccaacgcccagtctaacgaagaatatcttgatgaggacaccttgattcccaaaaatactagtgttttgattcgtcgcgttcctggacgacctcgcatgcccatagtaactgcacctgtaacagaaccagacgagccccaggtagaataccgatctgaggaggctcaagcagttagaagtaattttgtgggaggggagtcatctgccaccaaatatcctgaagatcttgaatgggatgaatttggaaatgatctttactctattcctgaaacaatatcagtacagtcaagcaaccaagtgcaggatgctcctcctccaagtaaagctgatgaggagagtaagatcaaagctttaattgacactccagccttagattggcagagtcaaccctctgatggctttggtgctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="34882" stop="31479"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34604" g_stop="33730" g_length="875"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="904" r_length="875" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33729" i_stop="32900" i_length="830">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.913" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32899" g_stop="32788" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="905" r_stop="1016" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32787" i_stop="32293" i_length="495">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32292" g_stop="32211" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="1017" r_stop="1098" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="32210" i_stop="32110" i_length="101">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="32109" g_stop="31943" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="1099" r_stop="1265" r_length="167" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31942" i_stop="31806" i_length="137">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="31805" g_stop="31779" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1266" r_stop="1292" r_length="27" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-U585853" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1263</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U585853" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34604" e_stop="33730"/>
          <exon e_start="32899" e_stop="32788"/>
          <exon e_start="32292" e_stop="32211"/>
          <exon e_start="32109" e_stop="31943"/>
          <exon e_start="31805" e_stop="31779"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCGACAATCAATCAGTTTCTCATCCGTGGAAACCCTAGTTCCGGCACCCCCCATAAAGCTTTACTCTTTTGGCTTTCTTTTCAGTTTTCCGTTCGATCCGCTTCGGAATTCAACGGACTTTTCGGCGAGTTCACCGTGCGCGAAGAGGAATTGACGATTTCCGGTAGAGAAACCTCTCCTGTTATCTGAAGAATTGTCGGTCGACGGGCGGTCGGTTGGTCGTCGCTGATTGGATTCGATTCAATTCAATCGATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTAAGAAAAAAGGAGCTATGTCAGTTTATTTTAAGTTTAAAAGTGCGAAAGATTATGATTCAATTCCAATTGATGGTCACTTTATTACTGTTGGTAATTTGAAAGAAAAAATATTTGAATCCAAGCATCTGGGCAGGGGTACAGATTTCGACCTCGTTGTCACCAACGCCCAGTCTAACGAAGGTTGGTTAGCTTCAATATAGTTAGTCATTTTCGTGCATTCCTAGTTGCATTTCTAGTAGTATTGCGCAAGTTGTTGTGTGACATTGACCTTGGGGTTTAGTGTAACTAAGGCATTGTTACTGAGGTGTTTCTCAGGGTGTTATTTTGGTTGATTCAATTATGATCTCTCTGCTATCAAATATATTTAGGTACTTTAGTATGTGCATTTTCCAAAAATAGAAGTGGCTTTTAACAGATGAAGATGATCACAGTGATTCGATTTAATTTTGAGTTGCTAAATTTATGCCTTTGAAATGAGAAGGATGATGCATTGACTCTTAAAAGGACCTTTGCATTGTAAAAATGTCTGATTGTAGTTCTCATTCTCTTTGGTATAATTCTGGCATCTCATCTTGATGGGTGGGTTGATAATTATATTGGTTTAAAAGGAGAGTCGTCTATTCGTTAATGTTTAAGTGCTGGGTTTGTAAAACTTGAGCTAGTACCATATCATTCTGCAACTTGGTTATTCCATAGTAGTCTTTGAAGAACTTCACCAATACTACTATGTATTGTACGACCCGGCACACAATATGTACCTTACTAGTGCTAGCCGAGGAAAAAGGTTTCATGTGAAGAGCCTATTTCACTCAAGGTTGATGTCACACAACAAATCTCATGGTCTAGTTGATCCTGTGTAAGGAATATAGTGCTCGGCGAATAGTTTGTTTTGATTAGGGTGCATGAATGCTGGATCATACCAAATTGATTGCATAATTTGTATTTCCATCCATATGTTTGTGAACTCTACAGGGCTTTATGTGTTTTGTCTTCTCTTTTTGCAATTTCAGAATATCTTGATGAGGACACCTTGATTCCCAAAAATACTAGTGTTTTGATTCGTCGCGTTCCTGGACGACCTCGCATGCCCATAGTAACTGCACCTGTAACAGAACCAGACGAGTATTAATCTTGATCCTTTTGACTCTCATCTGTTAGATTTATGAATACAAATACTGCTTTATCGTTGAGAATCCAAAATCTGTGGAAAAAAAGACGGTTTACCTGGATTAGTTACATTGTTTATTCCAAAGAAAAGAGTGACGTGGGTTACTTTTCTTCTTGGAGCTGGTGGTGGGGTGTTATGGGTGTTTACTAAATCTCAAGATCCTTTTTCTTTGATTTTTTCCTTTCCCTTATGAAGATCTTAGAATGGTGGTGGGGTGGGTATAGACCTTTACACTGTGTGGAGGGTGGTTGAAAGGGGGAGGCGTACAGGGGGAGAATAGATGCTAATGCCGTCATTTGCATTTTGTTGAATATGATGTTCAAAGCTTCTTTTTCCTCCCCCCTCTCCCCAGGGTGGGCATTGGTAATCATATGTCCTTGTACTGCTTTTGTCTTTTGGTCTGTGCCATAATAGCTGTGTTGAATATGACCAAGATGTGTTTTCTGCAGGCCCCAGGTAGAATACCGATCTGAGGAGGCTCAAGCAGTTAGAAGTAATTTTGTGGGAGGGGAGTCATCTGCCACCAAATATGTAAGCGCCCGTAACACTCTGCATTAGGAGAGTGTTGGTGATTGTAGTTGTAACAATTGGTGATCTTTAAGCATACTGAAATATCTATATCCATTTTGTAGCCTGAAGATCTTGAATGGGATGAATTTGGAAATGATCTTTACTCTATTCCTGAAACAATATCAGTACAGTCAAGCAACCAAGTGCAGGATGCTCCTCCTCCAAGTAAAGCTGATGAGGAGAGTAAGATCAAAGCTTTAATTGACACTCCAGCCTTAGATTGGCAGAGGTGGGAAAGCTTCTTTTTTCTCCTTTTGAAATGTTCATGCACACTTGACTCTGTTTTTATTGCATTAGCTGTTACTATTTCTAATATGTGATGATATTGGTATGAAAATGATTCTTATGGTCCTTATGTTGATGCAGTCAACCCTCTGATGGCTTTGGTGCTGG</genome_strand>
        <mrna_strand>CCCGACAATCAATCCGTTTAAAATCCGTGGAAACCCTAGTTCCGGCACCCCCCATAAAGCTTTACTCTTTTGGCTTTCTTTTCAGTTTTCCGTTCGATCCGCTTCGGAATTCAACGGACTTTTCGGCGAGTTCACCGTGCGCGAAGAGGAATTGACGATTTCCGGTAGAGAAACCTCTCCTGTTATCTGAAGAATTGTCGGTCGACGGGCGGTCGGTTGGTCGTCGCTGATTGGATTCGATTCAATTCAATCGATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTAAGAAAAAAGGAGCTATGTCAGTTTATTTTAAGTTTAAAAGTGCGAAAGATTATGATTCAATTCCAATTGATGGTCACTTTATTACTGTTGGTAATTTGAAAGAAAAAATATTTGAATCCAAGCATCTGGGCAGGGGTACAGATTTCGACCTCGTTGTCACCAACGCCCAGTCTAACGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCTTGATGAGGACACCTTGATTCCCAAAAATACTAGTGTTTTGATTCGTCGCGTTCCTGGACGACCTCGCATGCCCATAGTAACTGCACCTGTAACAGAACCAGACGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCCAGGTAGAATACCGATCTGAGGAGGCTCAAGCAGTTAGAAGTAATTTTGTGGGAGGGGAGTCATCTGCCACCAAATAT.....................................................................................................CCTGAAGATCTTGAATGGGATGAATTTGGAAATGATCTTTACTCTATTCCTGAAACAATATCAGTACAGTCAAGCAACCAAGTGCAGGATGCTCCTCCTCCAAGTAAAGCTGATGAGGAGAGTAAGATCAAAGCTTTAATTGACACTCCAGCCTTAGATTGGCAGAG.........................................................................................................................................TCAACCCTCTGATGGCTTTGGTGCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U585796" ref_strand="+" ref_description="SGN-U585796 Tomato 200607#2 [19 ESTs aligned] (*GB) gi|157346145|emb|CAO15842.1| (e_value=2e-173) unnamed; (*ATH) AT5G06260.1 (e_value=5e-147) | Symbol: None | nucleolar protein-related, contains weak similarity to nucleolar protein C7C (GI:13540302) (Rattus norvegicus) | chr5:1902600-1905102 REVERSE | Aliases: MHF15.22, MHF15_22; (*SWP) sp|Q6DDZ9|K1609_XENLA (e_value=3e-36) TLD domain-containing protein KIAA1609 homolog OS=Xenopus laevis; ">
      <seq>tgatttatttccagcaaacacacttgtcatccttgagccgatcttgactttggccgctataacttctggtagcgtctgcctcagcaaactgtgacactatatcacgtttacagctcgaagagagaagcagagtactgtgaagaagcgaaaaggggggagaattgggatttcggaagagcagaaaatgggaaactctcagtcgaattcaacgaatccacgttttgatttagccaagagagctttcacagagaggaaattggaagacttgaaatcgttgttcgattcactagctgcacaatcacagagcaatggaaaatacgtttcttcttctgttttcaaggcatatattggagttgaagggccattgggtgatagaatgttcgatttggtcacccagaagcgtaaggatcaaaagcttacatatgaggaccttgtgattgctaaaggaacctatgaaaaagggacaaatgctgatattgaagagtttatctatcagttgttagatgtctttgatgatggcgttgttggaagatcagatctggaagcagtcttgactgcagtactaagaaatatatcttctcatgagagccatcaatctgaacctagtccggacagggaaattctcgacattttcctcaatgctgcaaatttgacaacggatgatacaaaatgcgctgaaagttgtatgtcttttgaggaatttaaaagttggtgtgcccgtcttccatcagtaaggaagtttctcggaactctgttgtctacacgtgattcaggctctgaggttcctatgctagtatacccagagaacattgatcctgctgtaatattgttaagaaaggaatatgcttggcatataggtggggccctcccacaagacgagctgcatgaatggagacttttgtatcacagtacagtacatggcctaagtttcagtactttcctggggaacatttcaaatgacaaaggaccaactttattggtaattaaagacaaagaaggctatatttacggaggttatgcatctcagccatgggagaagcatgctgacttttatggggatatgaagtctttcctcttccagctatacccaaaggcatcggtttaccgtcctactggagcgaactctaatttacagtggtgtgctatacattttagttctgagagcatccccaatggcattggttttggaggacgagcacaccacttcggcttgttcatctcagctaactttgacctggggcatactttcacctgcacgacctttggcagtcctagcttgtcaaagacccaccaaatctatccagaagtgatagaatgctggggagttgcgataaaaagagctcaagataatcaggatagacttcaaggtaccgtgttagaaagatttaaagaggatcgccatatgcttaacatggttggacttgcaaattcaagtgagtgatgtgccctctgtactttcttcttgtgctgaattagcacagtttctagagtttattgtcttgcgtgtagtttaataatgtgttgtgttactacaatataagtgagtgcaaaatcactagatgctcaaccccgtgtatgcgtcgatagcatctagagtgtaatttaaggttttgcaatcattactatccctggagtcttggcaaatttcttcatgccattctcctaatcattgttaatagtaattgtcattttgatgtaagtatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="36743" stop="49114"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37043" g_stop="37279" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37280" i_stop="37373" i_length="94">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37374" g_stop="37476" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="340" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="37477" i_stop="37559" i_length="83">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="37560" g_stop="37664" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="445" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="37665" i_stop="41369" i_length="3705">
            <donor d_prob="0.860" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="41370" g_stop="41455" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="446" r_stop="531" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="41456" i_stop="44406" i_length="2951">
            <donor d_prob="0.914" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44407" g_stop="44648" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="773" r_length="242" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="44649" i_stop="45978" i_length="1330">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="45979" g_stop="46159" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="774" r_stop="954" r_length="181" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="46160" i_stop="47594" i_length="1435">
            <donor d_prob="0.583" d_score="1.00"/>
            <acceptor a_prob="0.680" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="47595" g_stop="47778" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="955" r_stop="1138" r_length="184" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="47779" i_stop="48254" i_length="476">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="48255" g_stop="48821" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="1139" r_stop="1704" r_length="566" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-U585796" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1705</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U585796" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37043" e_stop="37279"/>
          <exon e_start="37374" e_stop="37476"/>
          <exon e_start="37560" e_stop="37664"/>
          <exon e_start="41370" e_stop="41455"/>
          <exon e_start="44407" e_stop="44648"/>
          <exon e_start="45979" e_stop="46159"/>
          <exon e_start="47595" e_stop="47778"/>
          <exon e_start="48255" e_stop="48821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTTATTTCCAGCAAACACACTTGTCATCCTTGAGCCGATCTTGACTTTGGCCGCTATAACTTCTGGTAGCGTCTGCCTCAGCAAACTGTGACACTATATCACGTTTACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAGGCAATTTCTCTCTAACACTAAGCAATGATTACACAGTTGAATATTATCTGATTCAATTTTGAACTCAAACTGCATATGTTAATTCTTATTGTAGAGCTTTCACAGAGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAGGTACTTTTTGTCAATTTTTCTGTATTGTCTTGTTATTTTTTTTTTTACAATGAAATTGGGAATTGGGTGTTTGTGCACTATAGGCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAAGTAAGTGTTTTTGATCTCATTCCACTGGGTGTTGAACTAGTTACCCTAAAGTTTCCTCATTTGTTGACTTGATGGTATACAAAGGCCTTTTTTGATGGAAGAATTCACCCAAATATCCCCCATCTCAACCCCATAAACTTAAAATAGCTGGCAGTTGTATAATATATATATATATAATCCATGTATAATATGTACATAACCATGTGTAATCTATGTATAGCGACGAAGGATATTTGGGTGAAGATCCTTTTTTTTTATCCGTTTTCCTATTAGCTTTTGTAGTTATGTAACTTAAGATGAAATTTATATGTCCATCCATTGTATTGTATGTTGATGGATTATCTAAGTTTCACGCCAAGCTGGCTGAACACCATGTCTATAAAGAAAACCTGGTGCACTAAGCTCCTCTATTAACGGGTTCATGTGAAGGACCAAATGGTAGTAGGTTTGTTGTATCCCGACTTGCATTTATTCAAGAGGCTGTTTTTACGGCTTAAACCTATGGCCAATATCATAAAAGAACATTTTTCTACACCTATTCATGACCTTTTGGTACGAGCTCAAGTGTATCATATGATCCACCTTCATTATTGTTATATCTTACAGTTGTCGTAATAATAGGACAAACGATTTCCATACTCTGCCCTTCACTCTATAAGAATAACAACATCATGAACATTATTGAATAGTTACAACCTCGATATACAAGGAACTAGATAGATGTTATTACATTTTATTTGAAAAAGAAGTACATCTACAATATGAAAACTACATATGAGTTTTCTATATATGCTCGCAGAAAACATCTAGTTCACAGTAAGGTTGAAAAAAGCGGGTTGTGTTAACCCAGATAGGTTCAGGATTAGGGGAAAGAAATAACCGATTGTGATGAAGCCTTATCCTCATGGTTTTCTATACTTAGCATGATATGGCTACTGGGTTTGGCATTAAATAGGCTAGAGCTTCCATTCTATTGCCTCCTGGTATTGAGGAGTATAACAAGGATTCTCACATCATGCGCGGGTGTGGGTAAAGAAATTAGTTCCACCAAAACAATATGTGGATGTGATGGTAGATGAGAAAGGATTCCCCATTGTAGTGGATATATAGAGTAATGGCAAAGGATTCCCCATTGTAGTGGATATATAGAGTAATATGTTTGTCAAAGATAGTCTATTTCGAATAGGTAGTTGGAACATAGGTTGATTTATAGGGAAGTCAAAGAATCTTTTCTGATAGGTATGAAGAATTAAATGAAATCAATGTCTAGCTGAAACAGGACTATAGGAGAACAACTATGTTGTATGTCTACAAAGAGACTTGGTGTAAAGGAGACAAGGTTAAAGAGATGAACAAAACAAGCTATAATTTGTGGTGTTTTGGTTTGTGAGAGATCCAAGTAGGCACGGGTTAGAAATCATGTAGAACCAGGACATAAATATAAAGTTGCAGAAGTTAAAAACATGTTGATAGGATTATCTTAGTGTGGGAAAGAAAACAAAAAGTACCGTTAGTGCATAGGCTTCACAAATAGAATTAGATGAGGAAGCAGAAACTAAATTTTAAAAATATAGATCTCCATTGGTACAAGGGGGTTCTAGGTGACCAACAAACGTTTGTACAAGGAGATTTGAATGGATATGGGGTTAGATATGTGACACTTAAACTGAGTACATAACAAATATTGTGGTACAATCAATGGAGAAGGGAATGTTTTAAAGTTTGCATTAGCTTCTTATCTCTATTTTTAGGCTTTCAACTAAGACCTACTTTGAAGAAAGAGAACAACATTTGATGGTAATTAAGAGAGAAAGCAGCAATAACCAAATAAACTTCATTCTTACTAAAGGAAGTGACAATTCCACATTTAAGGACAGCAATGTTATACCATGAGAAGACCCAGTCCTAACCATCCAAAGTAGACTGATGCTCTTGCATGTAGAGCGAGAGAATGGAGTGAAAATGGAAAAGAGAAATATGCAACCAGATTTTAATATGCCCACTAAAAGGTTTAAACCACAAAACGTTCAAGGACAAACTATTGGAGGATGGAGCCTGTGACTTAGAAGTAGAGATAAGATCTGCAGAAGTAAATGCAAGTTACATCTTTATTCTTTACTGCATTTGAGTGCAAATGCCATTTTCTATTAGATTGTATGCCAATCTAGTGCATATAGGACTTCCAATAGAATGAAGAGTGATAAGCATGGAAGAGATGTAGAGATTGTCATCATGCTTATGGAAAAGACAAGTGTGCATGTGTGTCTTACCCTGATTTAGTCTACAGAAAACTGAGTTGTAGAAGCTACAGAAGACACTTGGTAGTTTTTGCAGTTTAACTAAGATGAAAGTAAAAGGAATTTTTATATTGGTTAGGATCACAATATTTTTCTTAGTCTTATATGGTTTCTCAGCGCGTTCACCACTAACACGGCTAAGTCGGTTTTCACCGGATCACCAAAACCGCATGCCACATCTTGGTGTGAAAACAAGTGTGTGTGGTGGGTGGGTGGGATTTCAAGACAATGCTGGGGGAGCTATATCCTAACGTCATTGGTATATCAAGGGTCATGCCTTTGAAGATTAGAAGCTGACTGTAGTGCTGGAAATTCCACTAAATCTGAAGCAGATCTCAGAAACTATTCCCTTTTGCATAGTTGTACTATTTGGTTGGAGAGGAACAATTCTTGTTTGAAGGAAAAAAGAGACTTCTTTCTAGAATTAATAATTATTGTCCACAGAATTTATATTTTTGGTGTCACTGCAGTATTGACTTTGAGTCTGTTAGGACCAAGGAGGAGTCACTTGATAATCTATTGTAATGGTATGTTGTTGAGTCATTTACTGCTCTGTACCTTCTTGGTACTTTATAAATAGAACTTGACCTTATCATAAAAAGAAAAAGCGACCACATTTTCATCCCTTGCATAGGTTCTATAGGTTGCCTTCTGTGGGAATTTCATTCCTTGATTCTTGGTAGCCGGATATTTAGTTAATTAGTTTCACTCCACTGGATCCTTTTCTTCAGTCAATCATAGATTGGTTTCTTTGGTAAATCTTGATTGATTTGTACCAGATCTTCATTAACGTATAGTTGACCGGATCATCATTAGCGTATTGCTGTGCATTCAAAACTTCACCATATTAGTGGCATACCCCTTTCAAGGAAAAGATCGTTGTCATCATTAAAATCCTCCCGATACTCGGGGTAGTAATGACTGAAACATGATTTACTTACTATGGTAGGACTCACTGGATAAGCTCAATGGCTGAGCTAGGGCCTAGCTTAATGGGATGAAGAGATGCTTTAACAGAAGACGCAAGACTTAGTCAACTTAATCAACTGCTGGGTATGGTGCTTTCATGTGTCTATCTTACCCTTAAAACAGCCATAATAAGCCTTTTTGATGTTATCTTTTTCTCCTGGAATTTGAGGACTCTCTAGAAATTCATGGCTTCTCCTTATGTGCCATTTCAATTAATCAAGTTTCTTACCAGCATATAGATGCCCCCTCTAGACAACCGTAGTGAAGAGCACAGTTGCCGAGAAAGGTGTTATATTTGTTAACTGTAATTCATTCAGATAATCATTACCCTTTACTGCATAAAGGTGGACATGTATCTCTCTACCTGTGAAGTTTCTATTACGAGTAATAATTGAAAAATATGAACTCATGGTGTATGATTCCACTTTTTATATTGCAGGGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAGGTAGAACAATAAGCTTCAATATGTTTAAGGCTATGTACAGTTTGGTCCCTCTAGATTTAGTTTTTCATATGTAACTATGCTCGACTTCCAAAATGTGTCAATTATCACTCTTGATCCATGGGGTAAAGTTAAAAAGTCCAAACTAACTTTTTAGTGGAATCGGCAATATCACCAGCTCAAACTTTTTACCTAGAGAACAACTGGAAGAGGTTCTTACTGTAGGTAGGTTGAAGTCATAGAGGGTTGTCGGTCATTTTGATTCGTGAGGGCATCACGTTTTGGGTAAAAGGGTGGACTAGCTATTTGAAGATTTATGTGCTAAATTTCAGTTAGTTTAGTGAGAAGGCTCTCCTAAAAGTACTAGCCAAGGGGGTACACTTGCCATAAGTTGACTTTAAAAAATCTACTCTTTCACTTTCCCCATTGATTCTGCTCCCCCCTGAAAGATGCTGTAATGTGAAGGACATTAGAAAAAAAAAACTTTAAAGTGAAGGATTATTAGAAAAAAATACTGTAAGGTGAAGGGAAGTTACACATTATGTGAAAATCGAGGGGAGTTTTGTTTTACAAGTCTGCAATTAGAGGAAGTAAATTGTAATTACACTATTTTTAATTCAATTAAATGCTTTATCTTTATCCTCCCAAATTAAATTTTAACCCTTTTTCACAGAAAAGCAACTGCTTGGTACAGCTGAGATAGTTTGTGCTCTGTTTTTGCACAGTTGAGGCAGTTATTTTTCCTTCCACACTAGGAGAACCAGGGATAACTTAAACATTCGTTTTATCTTGACCTTGTTTATATTGAACTGACTTGTGAGATTCTCACTTTGGACTTATCTCTTTGTTTTTATTTATTTTAATATTTTTCATTCAAGATACAATTGAGGTATTCTAGTCTTAACACTGACTTGAAAGCTGCTTAGACATCTCAGATTCTTTAGGTCTAGGATACTTTTTTTCATAACTAAGAATCCCTGATGTCTAGTAGTACACGGTTTAAAACTTGGTGGATGATGGTCCACTATACCCTTCTCCACTTAAATTTCCAGCTTTTATAAATGGCAAATGATAATATTTGAAACCACGATGTGTGCCTAAATAACATATTATTTGTTGCGCTTTTACTACGAGTAGACCAATGCCCAGGGGGGCATCTCTTGGACTACTTTAAAATGATAATGATGAGAAGATGATCATTATCAAGATGCTAATGTTATGGAGAGGACGGATCTTAGTAAAAGAATGATCATAATTCCTAGATACGCTCTCAATGAAGACCAGTCAAATGTTAATATAACTGTCAAGCGAAATGGATATCTCGAAAAAGGTTGTGATGCAAGCTTCTGAAAAAATAGGGATTTAAGGCATGTATATTCATTATTAAAAGCTTATATGAAGTTGGTAGAGATTGTTATTGTCACTATCATATGTATGAGTGTGACATTTTTCACAAAAATCGATGTGTCTTTGCCCCCTCATCTTATGATATTCACAACTTCTTTTTTCGTCCTTTACCCTCTCTAATCGAGTGATGGTATAATGATAAATCCAGTTCCCTCAGGCTGTCTTTCTCCGAGGGGATGTTTGCTTCTCTTGGTTTATGCAAAGTTCTCCATGATCAACAGCTTATTAGACTTTCCAAAATTGTTTCTTCTAGTCATCCTTGGGCATCCTGTTCCTTTTCCTGCAGTCATCTTAGTATTATCACTCTTTTCAATAGGTGCATAGTAGACCTTATTGTCTATAGCCTCATCACTCGCCCTGGGTTATTCCTCTTCCGTTAAGCTTTACAATAATTGATCTTCCCAACCCCTTTCCTTGGCTTTCTTCCTCAGGTGGGCTCTCCCTAAGAAGTACAACTAAGCGGGGCTTGCAAACTTTTAACTATTTTTCCATCCTTGCAAGCACTCGATACAAATTTAACCATCAGATTAGTTGGAGAGTCAAGTGATGTTTGTTGCCTTTGAAAGTGCTACATTTCCTCTCTAATAATAAGGTAAAATACTTACAAGAAGGGAGAAAGCCTGGAGCATTACGCTCCATGAAGAAAATGGTGTATTTAAGTTTAGAATGAGGCAACAATACTGCACCTACTTTTACTGGATAGGCATGTATGTTTGTCCACTGTACTCGAAACATCTGGATTGGGCCTCTTTTGTTAAATAATATCATTACTTTTTGAGGTGGAAGTGATATAGAATTTTATTTCTGAGAATGGATCTCCATTGAGAAAAAACAAGAGGAAGAAGGAGGAGGTTCCAGCTTTATTATTCAAGATAGGTAACATAATCACGTCACACTGATTGATAAACATTAAGTAATATGTACATACACTTTTTGAATAAAATGCGATTGACCATGCCTTTGGGGTGTCTTTTGTGGTCTATTTCAGCAAAATAATATTCTGTAACTGAAGTGAAATGAGTTCTTCCCATGAACTAGAAGCTGTCCTTTTTTTTTTTTTTTTTTTTTTTTGTGAAAAACCTAGAAATCATCCTTGTAAGCTGATATGGATGTACAGAGGATCCAACACTGGTTAGTCCATGATAATTGGAAAGAGCATATCATCTGGCATTAGATGACAGATTGTTTCCTGTATTTCAATTTTCAATAGTTGTTGTCAGATGAAAGGTTCATTTCTTCCAGAATCCCTTTTCTTTCTCTTTCTCTTTTTCCTTTTGCACTATGTGGAACATATATTTGTATAATGAGAAGCTTTATCTTCAGTTTATGAGCTTGACTGCCTAAACTTGGATGTCAAATAGATTCATTGAAGCTCTGGAAAAATAGCCCTAGCCTTGTTCGGTTTTAAACACAGAATTGTTCATAATGATTAAACATAGTTCTGGATCCAATATTAGATATCCATACTATTGATTACCAAAAAGAGAAATCAGTACTATTGTTTTCTCCTTTATGGTGGTAAATACATCAGTGAAATCAACTTGCAGATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTGAACCTAGTCCGGACAGGGAAATTCTCGACATTTTCCTCAATGCTGCAAATTTGACAACGGATGATACAAAATGCGCTGAAAGTTGTATGTCTTTTGAGGAATTTAAAAGTTGGTGTGCCCGTCTTCCATCAGTAAGGAAGTTTCTCGGAACTCTGTTGTCTACACGTGATTCAGGTTTCTGCTTTACAGTTCATCTTGTGTTTTCTATTTCTGTATTTCCACTTTTTTTCCTTGTCATTTGTAGTTTCTCTTAGAGGAATATCTTTTCTACATATTGGACATTGCTTACTGGGTGAATTTCTGTTGGGCTTAAATGTTAGCTTTTCTAACATTACTTCTATATTTGCTGAAACTTCTATGACAACTATGCATAATACTAGCTTTTCCATGTAATAGACATTTTACTTGTGTTCTCTTTGAAACTTAAATGTTATCATACATATGCCGGAGTTGTTAATTATACTGTTGTAGTTGCTGTTATGGGGATTCTCATAACCAGTAGCGTGCAAATGATTTTAAGTAAGCGGTGTCAACAATAAAATACGAGAACAAACGAGAATTCATTGTGATGATATCATATTGAAAAGGCAATCTAGATTTTAGTACTAAACATAATTTAAGCATATTGCCCAGTGGCATATCTAGGTGTGCGCCACGCTCAAAGTGTGATATGGTGCAACGGTTATTGGGTATACCTCTCTAAGTGAGGCCGGGGTTCAAAATCTATGTCTATCTTGTTATTTTTTTACTTCTTTCCCCATGCCTTTTGCATTTTAATTAAATTTTTTTTTTCTATCTGTGTTTAGTTTATTCTTCCAAAATTTCCAAGAATTCCTGTTCTCATTTTGTCGTCATAAAAATATATATTATTAAACCAAATATGTAAATTAAAATTAGTAGCAGTGAAGGATATAGCATATAGCCAGTGAGTTCAACTGATTCAAGACAAAATATCAGTACATATGTAACTATATAAAAATAATTAACTTTGAACATAAAATTCCAAAAGCATAATGGATCCAATGGTAAGAACTTAAAGGTTGAAACTCGTCAAAAATAACCTCATCGTAATAGTGCACCCATATTTTCGAATTCATGGATCTTCCTTCTGCATATTGCTAGAAGTCTTTTCGACGAGTTTTCATTCTTTAATTTGTATAATGATAACCTCATCAGAGATGCTTTAAACTAAGTCCTTTTTCATTTTGAGACACCAAAAGGAGGTGTAGCATAGTAATTTAGTTGATTGTTAGTGTATGACGATTTGGCTTCAATTCTTTGTAACCATGACTTTACTTATAACAACTCTAGAATATTGTCAGTTATGCACATTTAAGTTTGTGCAAAGAAATCTTTTTTTTAAAAAAATAATATTCATTCCACTTCTCCACCTCCAAAAATGAAAAAAAAACCCCAAAAAATGGTGAATTATTTCCCCAATTGCAAAACAGTGGTCAAGCTAGGGTGTAAACAGGGTTTACTAATCTATTAGTATTTTTTGCAGGCTCTGAGGTTCCTATGCTAGTATACCCAGAGAACATTGATCCTGCTGTAATATTGTTAAGAAAGGAATATGCTTGGCATATAGGTGGGGCCCTCCCACAAGACGAGCTGCATGAATGGAGACTTTTGTATCACAGTACAGTACATGGCCTAAGTTTCAGTACTTTCCTGGGGAACATTTCGTGAGTGGCTTCCTGCTTAATTATAAATGAGTTTCGTATTGAGTATTAACTTTCAATATCTTTGATATCATTGAGTTCCTTAAATTAGTTATAATTAGGTCAAAAGATTTTCTTGGTAGTCACCTTTTTTTCATGTTTACTTGGTGCTTGACAGAACATTTTTCAGCTTATTAGATCACTGAATATGCTTATATTATTATCTTTCAGTTTATCCTAACATCCACTTGCACAACTTGCTATTAGATGCCATTTTGATAGTTTTTTATTATAAAGGTTAAATGCCACGAGATCAGCTGCAGAGTTTACATAAGTATCCTTAGTTCAACGGACTTGAAATTTTGAGATAGTATCACACACATTTTACCAATAGGTTCCTAGCAAAACTAATTGCATTTTATAATGATAGATGCTTTCCTTAGGAAGGTTAGAGGTATCTGCCAGTTGCATTGATATATGAGTGGAGTAAGGGGTCATTTGGTAGTGTTTTAGCAAAAATAATGCATGCATTAGCTCTATGTATTAGTAATATCTTGTTTGGTGCACTTTTTCATGCTATGTATGCTAATTATACACTCTATTGTGTATTAGGGAGTGTATTGCAAATACCATGGATTTCTAGGTATAAGTAATGCAAAGGAATTATGCATGTATTATCATTCATGGTTAAAGACCCAATTACCCCCCAAATCCCCCTTTACATCTTTTTCACCATAATTATGGAGGATATTTTTATAAATAACTATTTTAATTCTTTGCATTCTATTTTTAATAAACCAAACCAAACAATGCATAAGAAATAATCTATGTATAATTAATTCAAGCATTGCTTCTGTACACTCTGCCAAACGACCCCTATGTGGCGTATTCCTGATCCACCCTCTAAGAAGCTGTGATATTTATCTATGGTGGTGATAGGGCATTGCATAATTCTCATGGCCCACTGCACTCTCCTTTTGAGATGCGCCACCCTTGTCCACCCCTGCTCTGTTTTGACTTGTATATGTGGTTTTCCCTACTTAGACCTAGCCTGCAGGCATTTCTACACACACTACATGCGCATGCAGCCTCGTTAAGTTTCAAGAATCATTCATTGTTTTCTTCATGAACTTTGCATAACCGAGTCTCAAACCAACCAAGAAACTAATAAGGCATCTATAACACAGTACGAAGAATCCAAGGACGACTCCAGAATTTGTTGTTGAAGGCTTGAAATGGCCATTGACACCCACAAATAAATCTCATTCATTAGCTGCATGAATCCCACCACATGAGCGTACACCATATTGACATGTGCCTTTTTTGTTGTAGTAGCTGAATGATAAAATTTGGCGCAACTAATGCATAAATGCCATCACTTTTTCCTCCCCTTTCTATGTCCGAGTGTGGTTAGTGTCAATTTTGTCAGCCAAGTATTAACCCCCTACTTGAACTGCAGAAATGACAAAGGACCAACTTTATTGGTAATTAAAGACAAAGAAGGCTATATTTACGGAGGTTATGCATCTCAGCCATGGGAGAAGCATGCTGACTTTTATGGGGATATGAAGTCTTTCCTCTTCCAGCTATACCCAAAGGCATCGGTTTACCGTCCTACTGGAGCGAACTCTAATTTACAGTGGGTAAGTTTCTGAACTTTTTGATATCAGTTACTTTATCCATATTAGCTGTCAAAAGAAATAATGGATGCACTTGGTATCGTTCAAGAAGGCCTCTCCATCTTCAGAACTTTAAAGTTCCTCCAACTCTCCAAAATTTTATTTTTCCTATAACCCCGTGGACTCTTCATTTCTCAAGTTGCAACTCGTTGCTATTGGTTACTATATTACCTATTGCCTTGGAATAGTAAGTGATTGTCTCACATTGACCAGCAGTCACCAAGATCCTTGATGGATTTTGGATTTTGAAGCTTGAGGTTAGTCATTCTTCTCTTGCCTTCTGAGGCTCGTTCAAGTCCCCTCAGTACAGCGGTGCTAATCTTCCTGGCTCCTTAAGCCTGGATGTTCAGATGTTGAAACAGTAAATACTTGCGAAGTGGAATTTTATTTATCAACTATCGAAGTAATACTAAGATGTTTAAGCTCTTTTCTTTCGGCAGTGTGCTATACATTTTAGTTCTGAGAGCATCCCCAATGGCATTGGTTTTGGAGGACGAGCACACCACTTCGGCTTGTTCATCTCAGCTAACTTTGACCTGGGGCATACTTTCACCTGCACGACCTTTGGCAGTCCTAGCTTGTCAAAGACCCACCAAATCTATCCAGAAGTGATAGAATGCTGGGGAGTTGCGATAAAAAGAGCTCAAGATAATCAGGATAGACTTCAAGGTACCGTGTTAGAAAGATTTAAAGAGGATCGCCATATGCTTAACATGGTTGGACTTGCAAATTCAAGTGAGTGATGTGCCCTCTGTACTTTCTTCTTGTGCTGAATTAGCACAGTTTCTAGAGTTTATTGTCTTGCGTGTAGTTTAATAATGTGTTGTGTTACTACAATATAAGTGAGTGCAAAATCACTAGATGCTCAACCCCGTGTATGCGTCGATAGCATCTAGAGTGTAATTTAAGGTTTTGCAATCATTACTATCCCTGGAGTCTTGGCAAATTTCTTCATGCCATTCTCCTAATCATTGTTAATAGTAATTGTCATTTTGATGTATTGTTAG</genome_strand>
        <mrna_strand>TGATTTATTTCCAGCAAACACACTTGTCATCCTTGAGCCGATCTTGACTTTGGCCGCTATAACTTCTGGTAGCGTCTGCCTCAGCAAACTGTGACACTATATCACGTTTACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAG..............................................................................................AGCTTTCACAGAGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAG...................................................................................GCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTGAACCTAGTCCGGACAGGGAAATTCTCGACATTTTCCTCAATGCTGCAAATTTGACAACGGATGATACAAAATGCGCTGAAAGTTGTATGTCTTTTGAGGAATTTAAAAGTTGGTGTGCCCGTCTTCCATCAGTAAGGAAGTTTCTCGGAACTCTGTTGTCTACACGTGATTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGAGGTTCCTATGCTAGTATACCCAGAGAACATTGATCCTGCTGTAATATTGTTAAGAAAGGAATATGCTTGGCATATAGGTGGGGCCCTCCCACAAGACGAGCTGCATGAATGGAGACTTTTGTATCACAGTACAGTACATGGCCTAAGTTTCAGTACTTTCCTGGGGAACATTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGACAAAGGACCAACTTTATTGGTAATTAAAGACAAAGAAGGCTATATTTACGGAGGTTATGCATCTCAGCCATGGGAGAAGCATGCTGACTTTTATGGGGATATGAAGTCTTTCCTCTTCCAGCTATACCCAAAGGCATCGGTTTACCGTCCTACTGGAGCGAACTCTAATTTACAGTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCTATACATTTTAGTTCTGAGAGCATCCCCAATGGCATTGGTTTTGGAGGACGAGCACACCACTTCGGCTTGTTCATCTCAGCTAACTTTGACCTGGGGCATACTTTCACCTGCACGACCTTTGGCAGTCCTAGCTTGTCAAAGACCCACCAAATCTATCCAGAAGTGATAGAATGCTGGGGAGTTGCGATAAAAAGAGCTCAAGATAATCAGGATAGACTTCAAGGTACCGTGTTAGAAAGATTTAAAGAGGATCGCCATATGCTTAACATGGTTGGACTTGCAAATTCAAGTGAGTGATGTGCCCTCTGTACTTTCTTCTTGTGCTGAATTAGCACAGTTTCTAGAGTTTATTGTCTTGCGTGTAGTTTAATAATGTGTTGTGTTACTACAATATAAGTGAGTGCAAAATCACTAGATGCTCAACCCCGTGTATGCGTCGATAGCATCTAGAGTGTAATTTAAGGTTTTGCAATCATTACTATCCCTGGAGTCTTGGCAAATTTCTTCATGCCATTCTCCTAATCATTGTTAATAGTAATTGTCATTTTGATGTA-AGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U590425" ref_strand="+" ref_description="SGN-U590425 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|76573345|gb|ABA46777.1| (e_value=9e-31) 40S ribosomal protein S17-like protein [Solanum tuberosum]; (*ATH) AT5G04800.2 (e_value=1e-30) | Symbol: None | 40S ribosomal protein S17 (RPS17D), 40S ribosomal protein S17, Lycopersicon esculentum, EMBL:AF161704 | chr5:1388486-1389849 FORWARD | Aliases: None; (*SWP) sp|P49215|RS17_SOLLC (e_value=2e-31) 40S ribosomal protein S17 OS=Solanum lycopersicum GN=RPS17; ">
      <seq>ggggtctggtccgaacaacctcagtgaaaaactcttcaagtcaaatgattgagcgatgctactcagaaatgactttggatgtgccacgcacacatcaacattctcgaagaagttgctgtcatcccgtccaagcgacacctcatcaacatctctggattctctactctgctgatgaagcgaatccggaaaggtccggttagaggcatttctcttaagctacaagaggaagatacagaacgccgtatggacttcgttcctgatgaatctgctattagtactgagaggattgaagttgataaggaaactattgacttgcttgcttcaatgggtatgagcgaattacctggtgttgtactcagagaacagcacacggtggctattgctggacctgttggtggatttggcggtggtcgtggtgggttcggcggcggacgtggaggtcgtggcgggtactgacatcggtttgttcgttttttttttggttaggggaagctatttttgctgaattgcagacttgattttatctgattattgtttaaatttgggattttgtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="50374" stop="49243"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50095" g_stop="49543" g_length="553"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-U590425" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U590425" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50095" e_stop="49543"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGAT-TTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTG</genome_strand>
        <mrna_strand>GGGGTCTGGTCCGAACAACCTCAGTGAAAAACTCTTCAAGTCAAATGATTGAGCGATGCTACTCAGAAATGACTTTGGATGTGCCACGCACACATCAACATTCTCGAAGAAGTTGCTGTCATCCCGTCCAAGCGACACCTCATCAACATCTCTGGATTCTCTACTCTGCTGATGAAGCGAATCCGGAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGATACAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAGTACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAGAGAACAGCACACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGCGGGTACTGACATCGGTTTGTTCGTTTTTTTTTTGGTTAGGGGAAGCTATTTTTGCTGAATTGCAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U583958" ref_strand="+" ref_description="SGN-U583958 Tomato 200607#2 [3 ESTs aligned] (*GB) gi|157346147|emb|CAO15844.1| (e_value=1e-83) unnamed; (*ATH) AT1G52340.1 (e_value=9e-62) | Symbol: None | short-chain dehydrogenase/reductase (SDR) family protein, similar to stem secoisolariciresinol dehydrogenase GI:13752458 from (Forsythia x intermedia) | chr1:19493468-19495317 REVERSE | Aliases: F19K6.3, F19K6_3; (*SWP) sp|Q9C826|ABA2_ARATH (e_value=8e-61) Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2; ">
      <seq>ccttttaacttcctctcttatttccaagaaaaattgttaaaaatgaatggctattcctctcctatagctcacacaagcagaagattagaagggaaagtagctattgtaacaggaggagctagtggatttggagaaagtacagtaagacttttcttacaaaatggtgcaaaagttgtaatagctgatgttcaagatgaaattggacaatctctttgcaatgatctcctcaattgtcctaaaaataaaaacaatgattttacatacatacattgtgatgtaacaaaggtctccgacgtcgaaaaccttatcgacgcaacaatttccaagtatggaaaactcgatatcatgttcaacaacgcaggaattccggggaatctcgatttcaacataattgacgcagataacgagaatttcaaaaaggtatttgacgttaacgtgtacggatcatttctcggtgcgaaatatgctgcccgggtcatgatcccagaaaagaaaggtgtcattctttttacgtctagtttggcctccggttcctcgggtgaatcaccgcattcatacaccgcctcgaaacacgcggtggtgggactcatgaagaatttatgtgccgaattagggcaacacgggataagagtgaactgcgtctcgccgtgcgcggtggcgacaccgatgttagtgaaggcgatgggtgtcgataagagcgtcgtggacggaataatttgctcgtcggcgaatttaaaaggggtggctccgacggcagaggatgtggcggaggcggcgttgtatttggcaagtgatgagtctaagtttgtaagcggagttaacctagtgattgatggaggttatagtcctactaatatgagttacataaaaacatttcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="55430" stop="52836"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55131" g_stop="55049" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55048" i_stop="54498" i_length="551">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54497" g_stop="54220" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="361" r_length="278" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54219" i_stop="53655" i_length="565">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53654" g_stop="53136" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="880" r_length="519" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-U583958" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>880</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U583958" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55131" e_stop="55049"/>
          <exon e_start="54497" e_stop="54220"/>
          <exon e_start="53654" e_stop="53136"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTAGAACTTCCTCTCTTATTTCCAAGAAAAATTGTTAAAAATGAATGGCTATTCCTCTCCTATAGCTCACACAAGCAGAAGGTAATAACCTTACTTTTATTTATTTTTTGTTTTTCGTGATATCCGATACTCATGTTAGAGTCCGACTAAATTTGTATTAGAAGTCAGGCTAAAGCGCTTCCTAACAAACATAACTCCTTACTCCTTATCAGGGGATTCGAACCCGAAATCTCTGATTAAAAATGAAGTAGTACTTATCACCCATACAATTTTTTTACTTAATTATGTCATTTATATCTTCATAGTTCAATATTTGCAACAATTTCTATGAGGTTTACACATATAAATTTAGGTCTATATGTGTTAAAAGTTATGAATTTAATTGAACTCATCTACGTACAATGTGTTAGATCTACTCTCATTCATTTTGATGTCATATTAATAATTTATGTATTATCTCATTTAAAAATTTAAGTTGTTATAAAATATCAATGGCGAATGCACAAGTATGAAATACGAGTTGGTGAAAATTCAGTATATTTTACTGTAAACTCAATTATTATCATATATTGACTTGAGATTGTTAAATTTTTTTTTTTTATAAATTTCAAATTCTGAATTCGGAAATGCAGATTAGAAGGGAAAGTAGCTATTGTAACAGGAGGAGCTAGTGGATTTGGAGAAAGTACAGTAAGACTTTTCTTACAAAATGGTGCAAAAGTTGTAATAGCTGATGTTCAAGATGAAATTGGACAATCTCTTTGCAATGATCTCCTCAATTGTCCTAAAAATAAAAACAATGATTTTACATACATACATTGTGATGTAACAAAGGTCTCCGACGTCGAAAACCTTATCGACGCAACAATTTCCAAGTATGGAAAACTCGATATCATGTTCAACAACGCAGGTAGGAATGTTAAATGAGCGGTTTAATTGATTTTATATAGGTTAAATTAAGCTATATGTAATTAATACATAGACAATGACCTCTAAAGGTTTCTTGAGTTGAATGAACAGAAAAAATAAGCTAAACAATGAGTCATAATCCAATCCGTCTAATTCATACCAAAATTAATACTCTTAGTCAAAATGGAGAAATTTTCACTAGTTATCCTTTTTTGGATGGTTGTTTTATAAATAACTTCTTCTTTTTTTATAACTTATGAAATTTTAGATTACGATCTAAAGATTTTTCGAATAAATCAGAAATTGTTAAATCTAGAAATTTGTTAGTTATTCAAATGTTAGACCATATATTATTAGCAAGAGAAACATATCAACATACATTTGAACCATTACTTAGAATATTAATTTTCTAAAGTGTTATATTTGCACACTTTTTTAAATAAAGACAACTCAAAATAATGGCCTAAAAAGGAAATATTCACTTGATAAATTGACCATCACAAGTTTAAATTTAGATCGACTTATATTTTTATGAGCTAATTTAATTTTGTCATTCTTAAATATAGGAATTCCGGGGAATCTCGATTTCAACATAATTGACGCAGATAACGAGAATTTCAAAAAGGTATTTGACGTTAACGTGTACGGATCATTTCTCGGTGCGAAATATGCTGCCCGGGTCATGATCCCAGAAAAGAAAGGTGTCATTCTTTTTACGTCTAGTTTGGCCTCCGTTTCCTCGGGTGAATCACCGCATTCATACACCGCCTCGAAACACGCGGTGGTGGGACTCACGAAGAATTTATGTGCCGAATTAGGGCAACACGGGATAAGAGTGAACTGCGTCTCGCCGTGCGCGGTGGCGACACCGATGTTAGTGAAGGCGATGGGTGTCGATAAGAGCGTCGTGGACGGAATAATTTGCTCGTCGGCGAATTTAAAAGGGGTGGCTCCGACGGCAGAGGATGTGGCGGAGGCGGCGTTGTATTTGGCAAGTGATGAGTCTAAGTTTGTAAGCGGAGTTAACCTAGTGATTGATGGAGGTTATAGTACTACTAATATGAGTTACATAAAAACAATTCAAA</genome_strand>
        <mrna_strand>CCTTTTAACTTCCTCTCTTATTTCCAAGAAAAATTGTTAAAAATGAATGGCTATTCCTCTCCTATAGCTCACACAAGCAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGAAGGGAAAGTAGCTATTGTAACAGGAGGAGCTAGTGGATTTGGAGAAAGTACAGTAAGACTTTTCTTACAAAATGGTGCAAAAGTTGTAATAGCTGATGTTCAAGATGAAATTGGACAATCTCTTTGCAATGATCTCCTCAATTGTCCTAAAAATAAAAACAATGATTTTACATACATACATTGTGATGTAACAAAGGTCTCCGACGTCGAAAACCTTATCGACGCAACAATTTCCAAGTATGGAAAACTCGATATCATGTTCAACAACGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTCCGGGGAATCTCGATTTCAACATAATTGACGCAGATAACGAGAATTTCAAAAAGGTATTTGACGTTAACGTGTACGGATCATTTCTCGGTGCGAAATATGCTGCCCGGGTCATGATCCCAGAAAAGAAAGGTGTCATTCTTTTTACGTCTAGTTTGGCCTCCGGTTCCTCGGGTGAATCACCGCATTCATACACCGCCTCGAAACACGCGGTGGTGGGACTCATGAAGAATTTATGTGCCGAATTAGGGCAACACGGGATAAGAGTGAACTGCGTCTCGCCGTGCGCGGTGGCGACACCGATGTTAGTGAAGGCGATGGGTGTCGATAAGAGCGTCGTGGACGGAATAATTTGCTCGTCGGCGAATTTAAAAGGGGTGGCTCCGACGGCAGAGGATGTGGCGGAGGCGGCGTTGTATTTGGCAAGTGATGAGTCTAAGTTTGTAAGCGGAGTTAACCTAGTGATTGATGGAGGTTATAGTCCTACTAATATGAGTTACATAAAAACATTTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U602211" ref_strand="+" ref_description="SGN-U602211 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>gcaacatatctgtcatttgtttgcttcaatctaaaccttcttaaactttttgtgttgtagtaaatgaatacctctgcattgaccgacatatttgaatcaaagcataattccttcaaattactagatcgggacttggtgaagagtagcaaaacaagcataattcatttcttgattgctcatcctccatctctcttctcagaattcttctaataaaggtacgctacatttatacatttgctaatcagagaaaaaagcaagttcgtaaatttttctttctgttttattttttgcagatttttatgttttttgtttcagatttagctcattttcatggatttggggagtcccaaagcctgtaggtcatattatgcacttctgttttgttgcttcgcaactaattttttcaatttatgtcttagacaagttcattataattcacgaatatcttcgtactgtatctgcttcaactaagactcattctgatttatatatatatatatatatatatatatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="+" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="60101" stop="61214"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60400" g_stop="60914" g_length="515"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="515" r_length="515" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="+" ref_id="SGN-U602211" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U602211" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60400" e_stop="60914"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACATATCTGTCATTTGTTTGCTTCAATCTAAACCTTCTTAAACTTTTTGTGTTGTAGTAAATGAATACCTCTGCATTGACCGACATATTTGAATCAAAGCATAATTCCTTCAAATTACTAGATCGGGACTTGGTGAAGAGTAGCAAAACAAGCATAATTCATTTCTTGATTGCTCATCCTCCATCTCTCTTCTCAGAATTCTTCTAATAAAGGTACGCTACATTTATACATTTGCTAATCAGAGAAAAAAGCAAGTTCGTAAATTTTTCTTTCTGTTTTATTTTTTGCAGATTTTTATGTTTTTTGTTTCAGATTTAGCTCATTTTCATGGATTTGGGGAGTCCCAAAGCCTGTAGGTCATATTATGCACTTCTGTTTTGTTGCTTCGCAACTAATTTTTTCAATTTATGTCTTAGACAAGTTCATTATAATTCACGAATATCTTCGTACTGTATCTGCTTCAACTAAGACTCATTCTGATTTATATATATATATATATATATATATATATG</genome_strand>
        <mrna_strand>GCAACATATCTGTCATTTGTTTGCTTCAATCTAAACCTTCTTAAACTTTTTGTGTTGTAGTAAATGAATACCTCTGCATTGACCGACATATTTGAATCAAAGCATAATTCCTTCAAATTACTAGATCGGGACTTGGTGAAGAGTAGCAAAACAAGCATAATTCATTTCTTGATTGCTCATCCTCCATCTCTCTTCTCAGAATTCTTCTAATAAAGGTACGCTACATTTATACATTTGCTAATCAGAGAAAAAAGCAAGTTCGTAAATTTTTCTTTCTGTTTTATTTTTTGCAGATTTTTATGTTTTTTGTTTCAGATTTAGCTCATTTTCATGGATTTGGGGAGTCCCAAAGCCTGTAGGTCATATTATGCACTTCTGTTTTGTTGCTTCGCAACTAATTTTTTCAATTTATGTCTTAGACAAGTTCATTATAATTCACGAATATCTTCGTACTGTATCTGCTTCAACTAAGACTCATTCTGATTTATATATATATATATATATATATATATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U604841" ref_strand="+" ref_description="SGN-U604841 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|77403667|dbj|BAE46412.1| (e_value=3e-30) Pre-mRNA; (*ATH) AT4G31200.3 (e_value=9e-23) |; (*SWP) sp|Q8CGZ0|CHERP_MOUSE (e_value=7e-11) Calcium homeostasis endoplasmic reticulum protein OS=Mus musculus GN=Cherp; ">
      <seq>ctgcgaactccgtctgccggcgacgaaaatcagttttatggatcgacaagctcctgattatgcagctgccatggcgtttgctcaacagcagcaccaagcagctaacacacaacagcaacaacagtttggttttcatccccaacatcaacaatttcctccttcaattcatggtcctccatttccaggcccacattcttctcttcaacagttcccttaccctcgccctatgcagcaaccacaactccatccgcatacaccccctccacatcttcttcatcttcagcagcaacaacaaccacctcctgcttttccaccacacatgcctcctcatcttgttccatcactttttttcaatccgtatgattctcccccacctccttctcctccaccatctgatcctgaactccaaaagcgtattgataaattaattgaatatgctgtcaagaatggtcctgagtttgaagccatgatccgtgaaaagcagcaagacaatcctgcttacagtttcctctttggtggtgaaggtcattattactatcgctataagctttggatgtctactcgcccccctggtggggccttcaatcctcctttccnatcctcttcattgcctatgatgcatccaccaaatcctatgangagtccttcacccttaantccatataangcctccnangnttcngct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="75741" stop="73145"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75441" g_stop="75407" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75406" i_stop="74095" i_length="1312">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.810" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="74094" g_stop="73445" g_length="650"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="685" r_length="650" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-U604841" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>685</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U604841" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75441" e_stop="75407"/>
          <exon e_start="74094" e_stop="73445"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCGAACTCCGTCTGCCGGCGACGAAAATCAGTTGTAAGTTCCTTCTAGTTTTTATTATATGATTCTTCTTACTTGCATATATGATTTATTTTAGCTTATCAATTTGATAAATAGCTCCAAATTTGCTGTGTAATAAAGGGAAAGAGGCATTTTCTTTTGGATTGATTAATGTTGCAATTATAATAAATAAATTGAAACGGAGAAAGGAATAAACAATGCTCCTCCCTGTAAGGAACAATCGTTGAGTGAATTGTATCTTTTTTGTGTTAGTTGAATTAAGCGCCCAAGTGATTTTATTCCAAACGTTCTAAACCTAAGTAATTGAAAAGTAGAATTGGATAGATTTTGTTAAAATTCAAATCAGTGCATTGACACTGACGCTTGGGTTGAGCTTAGCAGCCTATTATGTAAGAAATTCGATTAATGGGAGTGTTGAGTAACAACCAAGTGTGTTTGGTATGACAGGAGTTATTTAAGGGTCAATCCTAGTTGGTACCGCTTTGGATGTTGGAGAAATTGATTGTTAGTAATTGTTGAGGGTATTAGTGTAGTTCGTTAATTTTTTGTGACATATGCAAGCATGCAAGGTCAATAAAGCATTATAATTCGAACAAAAATGAAAGCTCATTGTAAAGGTCAGTGAGATCAGAGATGTTTTTCTTTTTTTAATTTTGAGTGTAGCTTGCTTCTTTCTTTTAACTACAGAAGAATCACGTGTGAAGATGAAAATAAGTACTTAAAATTGTGTGTCTTAAACCTCTGAAACCATATATGCTGGAAATTTTGTAGTTTCTGCAGCTGCGAAGTTTTCCTCATCTTGTCTGCAAATAAGTGAAACATTTGTAATTTCCCATTTTCATAATCTGGTCCTGAACAACAGGAAAAGAAACCTCTTTTTCTGCTTGATAAATGACCAAGTAAGAGTATTTTCCTTCTGGGCGTTTCTCTTATCAGGTTGAACATTGTCAAAACCTTTTTTCTTCCCCCCTGTCTGAAGTTTAGAGTCATATGAGGCAGTATGAAGTGGTTTGAGCTGCTTGTCTTTCTTAGAATGTATTCTTATTTCCGAAAGATAACAAAAATGAAGCATGTAATTTATTATCACTTATGCTAAATCACAAAAAAAAAAAAATTTTTATGCGCTGCTATGAATTCGGAAAGCATTTTTTACTGCTCTCTTTTTGATGCATCTCTTTGTTCACTTTTATGTACCTTTCCCACCCCTTCATTTTCTTCCTGCTAGAGTCAAGTTCTGTTTTATATAATTTTTAGTTTAGCTGATTATGTTTTAATACGGGACTTCACACAGCTCTAATATTCAGGTCCTGCTAATTTTTGTTAGTAGTTATGGATCGACAAGCTCCTGATTATGCAGCTGCCATGGCGTTTGCTCAACAGCAGCACCAAGCAGCTAACACACAACAGCAACAACAGTTTGGTTTTCATCCCCAACATCAACAATTTCCTCCTTCAATTCATGGTCCTCCATTTCCAGGCCCACATTCTTCTCTTCAACAGTTCCCTTACCCTCGCCCTATGCAGCAACCACAACTCCATCCGCATACACCCCCTCCACATCTTCTTCATCTTCAGCAGCAACAACAACCACCTCCTGCTTTTCCACCACACATGCCTCCTCATCTTGTTCCATCACTTTTTTTCAATCCGTATGATTCTCCCCCACCTCCTTCTCCTCCACCATCTGATCCTGAACTCCAAAAGCGTATTGATAAATTAATTGAATATGCTGTCAAGAATGGTCCTGAGTTTGAAGCCATGATCCGTGAAAAGCAGCAAGACAATCCTGCTTACAGTTTCCTCTTTGGTGGTGAAGGTCATTATTACTATCGCTATAAGCTTTGGATGTCTACTCGCCCCCCTGGTGGGGCCTTCAATCCTCCTTTCCCATCCTCTTCATTGCCTATGATGCATCCACCAAATCCTATGATGAGTCCTTCACCCTTAACTCCATATAATGCCTCCAATGCTTCTGCT</genome_strand>
        <mrna_strand>CTGCGAACTCCGTCTGCCGGCGACGAAAATCAGTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGGATCGACAAGCTCCTGATTATGCAGCTGCCATGGCGTTTGCTCAACAGCAGCACCAAGCAGCTAACACACAACAGCAACAACAGTTTGGTTTTCATCCCCAACATCAACAATTTCCTCCTTCAATTCATGGTCCTCCATTTCCAGGCCCACATTCTTCTCTTCAACAGTTCCCTTACCCTCGCCCTATGCAGCAACCACAACTCCATCCGCATACACCCCCTCCACATCTTCTTCATCTTCAGCAGCAACAACAACCACCTCCTGCTTTTCCACCACACATGCCTCCTCATCTTGTTCCATCACTTTTTTTCAATCCGTATGATTCTCCCCCACCTCCTTCTCCTCCACCATCTGATCCTGAACTCCAAAAGCGTATTGATAAATTAATTGAATATGCTGTCAAGAATGGTCCTGAGTTTGAAGCCATGATCCGTGAAAAGCAGCAAGACAATCCTGCTTACAGTTTCCTCTTTGGTGGTGAAGGTCATTATTACTATCGCTATAAGCTTTGGATGTCTACTCGCCCCCCTGGTGGGGCCTTCAATCCTCCTTTCCNATCCTCTTCATTGCCTATGATGCATCCACCAAATCCTATGANGAGTCCTTCACCCTTAANTCCATATAANGCCTCCNANGNTTCNGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U568381" ref_strand="+" ref_description="SGN-U568381 Tomato 200607#2 [3 ESTs aligned] ">
      <seq>ggttccttctagtttttattatatgattcttcttacttgcatatatgatttattttagcttatcaatttgataaatagctccaaatttgctgtgtaataaagggaaagaggcattttcttttggattgattaatgttgcaattataataaataaattgaaacggagaaaggaataaacaatgctcctccctgtaaggaacaatcgttgagtgaattgtatcttttttgtgttagttgaattaagcgcccaagtgattttattccaaacgttctaaacctaagtaattgaaaagtagaattggatagattttgttaaaattcaaatcagtgcattgacactgacgcttgggttgagcttagcagcctattatgtaagaaattcgattaatgggagtgttgagtaacaaccaagtgtgtttggtatgacaggagttatttaagggtcaatcctagttggtaccgctttggatgttggagaaattgattgttagtaattgttgagggtattagtgtagttcgttaattttttgtgacatatgcaagcatgcaaggtcaataaagcattataattcgaacaaaaatgaaagctcattgtaaaggtcagtgagatcagagatgtttttctttttttaattttgagtgtagcttgcttctttcttttaactacagaagaatcacgtgtgaagatgaaaataagtacttaaaattgtgtgtcttaaacctctgaaaccatatatgctggaaattttgtagtttctgcagctgcgaagttttcctcatcttgtctgcaaataagtgaaacatttgtaatttcccattttcataatctggtcctgaacaacaggaaaagaaacctctttttctgcttgataaatgaccaagtaagagtattttccttctgggcgtttctcttatcaggttgaacattgtcaaaaccttttttcttcccccctgtctgaagtttagagtcatatgaggcagtatgaagtggtttgagctgcttgtctttcttagaatgtattcttatttccgaaagataacaaaaatgaagcatgtaatttattatcacttatgctaaatcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="75702" stop="74021"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75403" g_stop="74321" g_length="1083"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1083" r_length="1083" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-U568381" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1083</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U568381" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75403" e_stop="74321"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTCCTTCTAGTTTTTATTATATGATTCTTCTTACTTGCATATATGATTTATTTTAGCTTATCAATTTGATAAATAGCTCCAAATTTGCTGTGTAATAAAGGGAAAGAGGCATTTTCTTTTGGATTGATTAATGTTGCAATTATAATAAATAAATTGAAACGGAGAAAGGAATAAACAATGCTCCTCCCTGTAAGGAACAATCGTTGAGTGAATTGTATCTTTTTTGTGTTAGTTGAATTAAGCGCCCAAGTGATTTTATTCCAAACGTTCTAAACCTAAGTAATTGAAAAGTAGAATTGGATAGATTTTGTTAAAATTCAAATCAGTGCATTGACACTGACGCTTGGGTTGAGCTTAGCAGCCTATTATGTAAGAAATTCGATTAATGGGAGTGTTGAGTAACAACCAAGTGTGTTTGGTATGACAGGAGTTATTTAAGGGTCAATCCTAGTTGGTACCGCTTTGGATGTTGGAGAAATTGATTGTTAGTAATTGTTGAGGGTATTAGTGTAGTTCGTTAATTTTTTGTGACATATGCAAGCATGCAAGGTCAATAAAGCATTATAATTCGAACAAAAATGAAAGCTCATTGTAAAGGTCAGTGAGATCAGAGATGTTTTTCTTTTTTTAATTTTGAGTGTAGCTTGCTTCTTTCTTTTAACTACAGAAGAATCACGTGTGAAGATGAAAATAAGTACTTAAAATTGTGTGTCTTAAACCTCTGAAACCATATATGCTGGAAATTTTGTAGTTTCTGCAGCTGCGAAGTTTTCCTCATCTTGTCTGCAAATAAGTGAAACATTTGTAATTTCCCATTTTCATAATCTGGTCCTGAACAACAGGAAAAGAAACCTCTTTTTCTGCTTGATAAATGACCAAGTAAGAGTATTTTCCTTCTGGGCGTTTCTCTTATCAGGTTGAACATTGTCAAAACCTTTTTTCTTCCCCCCTGTCTGAAGTTTAGAGTCATATGAGGCAGTATGAAGTGGTTTGAGCTGCTTGTCTTTCTTAGAATGTATTCTTATTTCCGAAAGATAACAAAAATGAAGCATGTAATTTATTATCACTTATGCTAAATCAC</genome_strand>
        <mrna_strand>GGTTCCTTCTAGTTTTTATTATATGATTCTTCTTACTTGCATATATGATTTATTTTAGCTTATCAATTTGATAAATAGCTCCAAATTTGCTGTGTAATAAAGGGAAAGAGGCATTTTCTTTTGGATTGATTAATGTTGCAATTATAATAAATAAATTGAAACGGAGAAAGGAATAAACAATGCTCCTCCCTGTAAGGAACAATCGTTGAGTGAATTGTATCTTTTTTGTGTTAGTTGAATTAAGCGCCCAAGTGATTTTATTCCAAACGTTCTAAACCTAAGTAATTGAAAAGTAGAATTGGATAGATTTTGTTAAAATTCAAATCAGTGCATTGACACTGACGCTTGGGTTGAGCTTAGCAGCCTATTATGTAAGAAATTCGATTAATGGGAGTGTTGAGTAACAACCAAGTGTGTTTGGTATGACAGGAGTTATTTAAGGGTCAATCCTAGTTGGTACCGCTTTGGATGTTGGAGAAATTGATTGTTAGTAATTGTTGAGGGTATTAGTGTAGTTCGTTAATTTTTTGTGACATATGCAAGCATGCAAGGTCAATAAAGCATTATAATTCGAACAAAAATGAAAGCTCATTGTAAAGGTCAGTGAGATCAGAGATGTTTTTCTTTTTTTAATTTTGAGTGTAGCTTGCTTCTTTCTTTTAACTACAGAAGAATCACGTGTGAAGATGAAAATAAGTACTTAAAATTGTGTGTCTTAAACCTCTGAAACCATATATGCTGGAAATTTTGTAGTTTCTGCAGCTGCGAAGTTTTCCTCATCTTGTCTGCAAATAAGTGAAACATTTGTAATTTCCCATTTTCATAATCTGGTCCTGAACAACAGGAAAAGAAACCTCTTTTTCTGCTTGATAAATGACCAAGTAAGAGTATTTTCCTTCTGGGCGTTTCTCTTATCAGGTTGAACATTGTCAAAACCTTTTTTCTTCCCCCCTGTCTGAAGTTTAGAGTCATATGAGGCAGTATGAAGTGGTTTGAGCTGCTTGTCTTTCTTAGAATGTATTCTTATTTCCGAAAGATAACAAAAATGAAGCATGTAATTTATTATCACTTATGCTAAATCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U593741" ref_strand="+" ref_description="SGN-U593741 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>cagccctaatctactttgttaataatgatgccttggtataaaagaaggcttgatgaacgaaagtggtgagattaggggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgccacgttccggtaccaggatagaatatggatcgggtgtcacgttccgacaccaggatagaatatggatcgggtgtcacgttctgacaccaggatagaatatggatcgggtgccacgttccggtgccaggatagtatattgaggagtggagtgtcacgtaaggacacgaggggaataaatatgatgaatcttgaaatatgttaatatatgcaatccaatgaactaaattcccaaataagtatgatgaggaggtgtgagtcctcattgatgtgcttggtgatgcaaccaagggttatggtaattgcaaatgctgcatgctaaggatattagttaattttatgatattgcttaatacatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0101H16-NDi7h/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0101H16.1" temp_strand="-" temp_description="C02SLe0101H16.1  AC215444.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0101H16 sequenced_by:kribb upload_account_name:korea">
        <position start="82789" stop="81333"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82490" g_stop="82254" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="231" r_length="231" r_score="0.941"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="82253" i_stop="81983" i_length="271">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81982" g_stop="81916" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="298" r_length="67" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="81915" i_stop="81840" i_length="76">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81839" g_stop="81619" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="519" r_length="221" r_score="0.842"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0101H16.1" gen_strand="-" ref_id="SGN-U593741" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.012" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0101H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U593741" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82490" e_stop="82254"/>
          <exon e_start="81982" e_stop="81916"/>
          <exon e_start="81839" e_stop="81619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACCCTAATCTACTTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTGGATGAACGAAAGTAGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAAGATAGTATATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATTGGAGTGTCACGTTCCGACACCAGGATAGAATATGAATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATCGAAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATCGGAGTGTCACATTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGGATCGGGTGCCACGTTCCAGTACCAGGATAGTATATGAGGATCGGTGTGTCACATTTCGACACCAGGATAGTATATGAGGAGCGAAGTGTCACGTACCGACACGAAAGGAATAAAGATAATGAATCTTGAAAAATGTTAATATACTCAATCTAATGAACCTAATTCCCAAATGAGTATGATGAGGAGGCGTGAGTCCTCATTGATGAGCTTGGTGTTATGACCAAGGGTTATGGTACTTGTAAATGCCGCATGTTGAGTATTGTAGTTGATTTTATGATATTATCTGATATATACT</genome_strand>
        <mrna_strand>CAGCCCTAATCTACTTTGTTAATAATGATGCCTTGGTATAAAAGAAGGCTTGATGAACGAAAGTGGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATAT--GGATCGG-GTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGAATAT--GGATCGG-GTGTCACGTTCCGACACCAGGATAGAATATGGATCGG...............................................................................................................................................................................................................................................................................GTGTCACGTTCTGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTGCCAGGATAGTATAT............................................................................TGAGGAGTGGAGTGTCACGTAAGGACACGAGGGGAATAAATATGATGAATCTTGAAATATGTTAATATATGCAATCCAATGAACTAAATTCCCAAATAAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGATGCAACCAAGGGTTATGGTAATTGCAAATGCTGCATGCTAAGGATATTAGTTAATTTTATGATATTGCTTAATACATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>17</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="13022" PGL_stop="13166"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13022" e_stop="13166"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.945"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.945">
            <gDNA_exon_boundary e_start="13022" e_stop="13166" e_length="145"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13022" stop="13166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599792" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATTGTAAACCCTACTATATGCTTAATTGTATGTTTGCATGAATATGATTATGTGATTGTGATAAGATAACATGATGAAAATATTGAATCCCAAATATTGAAAAGAAACTTTAATATACATTATTAATGATGATGCCTTGGTATA</gDNA_template>
            <first_frame> Y  C  K  P  Y  Y  M  L  N  C  M  F  A  *  I  *  L  C  D  C  D  K  I  T  *  *  K  Y  *  I  P  N  I  E  K  K  L  *  Y  T  L  L  M  M  M  P  W  Y  </first_frame>
            <second_frame>  I  V  N  P  T  I  C  L  I  V  C  L  H  E  Y  D  Y  V  I  V  I  R  *  H  D  E  N  I  E  S  Q  I  L  K  R  N  F  N  I  H  Y  *  *  *  C  L  G  I </second_frame>
            <third_frame>   L  *  T  L  L  Y  A  *  L  Y  V  C  M  N  M  I  M  *  L  *  *  D  N  M  M  K  I  L  N  P  K  Y  *  K  E  T  L  I  Y  I  I  N  D  D  A  L  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0101H16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="19827" PGL_stop="13141"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19827" e_stop="19594"/>
            <exon e_start="19479" e_stop="19322"/>
            <exon e_start="13339" e_stop="13289"/>
            <exon e_start="13203" e_stop="13141"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.940"/>
          <exon-intron don_prob="0.711" acc_prob="0.000" e_score="0.981"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.825"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.940">
            <gDNA_exon_boundary e_start="19827" e_stop="19594" e_length="234"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="19593" i_stop="19480" i_length="114"/>
          </intron>
          <exon e_serial="2" e_score="0.981">
            <gDNA_exon_boundary e_start="19479" e_stop="19322" e_length="158"/>
          </exon>
          <intron i_serial="2" don_prob="0.711" acc_prob="0.000">
            <gDNA_intron_boundary i_start="19321" i_stop="13340" i_length="5982"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="13339" e_stop="13289" e_length="51"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="13288" i_stop="13204" i_length="85"/>
          </intron>
          <exon e_serial="4" e_score="0.825">
            <gDNA_exon_boundary e_start="13203" e_stop="13141" e_length="63"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19827" stop="19594"/>
              <exon start="19479" stop="19322"/>
              <exon start="13339" stop="13289"/>
              <exon start="13203" stop="13141"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U593741" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTATGTATTAAGCAATATCATAAAATCAACTAATATCCTTAGCATGCAGCATTTACAGTTACCATAACCCTTGGTTACAACACCAAGCACATCAATGAGGACTCACACCTCCTCATCATACTCATTTGGGAATTTAGTTCATTAGATTGGATATTTTAACATATTTCAAGATTCATTATCTTTATTCCCCTCGTGTCGGTACGTGACACTCCGCTCCTCAATATACTATCCTG : GTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTGTCGGAACGTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCCATATTCTATCCTGGTGTCAGAAC : GTGACACCCGATCCATATTCTATCCTGGTACCGGAACGTGGCACCCGATCC : CATCAATCCCATTACTTTAATTCATCAAGCCTTCTTCTATACCAAGGCATCATCATTAATAAT</gDNA_template>
            <first_frame> S  M  Y  *  A  I  S  *  N  Q  L  I  S  L  A  C  S  I  Y  S  Y  H  N  P  W  L  Q  H  Q  A  H  Q  *  G  L  T  P  P  H  H  T  H  L  G  I  *  F  I  R  L  D  I  L  T  Y  F  K  I  H  Y  L  Y  S  P  R  V  G  T  *  H  S  A  P  Q  Y  T  I  L  :  V  P  E  R  G  T  R  S  I  F  Y  P  G  V  G  T  *  H  P  I  H  I  L  S  W  C  R  N  V  T  P  D  P  Y  S  I  L  V  P  E  R  G  T  R  S  I  F  Y  P  G  V  R  T :   *  H  P  I  H  I  L  S  W  Y  R  N  V  A  P  D  P :   I  N  P  I  T  L  I  H  Q  A  F  F  Y  T  K  A  S  S  L  I   </first_frame>
            <second_frame>  V  C  I  K  Q  Y  H  K  I  N  *  Y  P  *  H  A  A  F  T  V  T  I  T  L  G  Y  N  T  K  H  I  N  E  D  S  H  L  L  I  I  L  I  W  E  F  S  S  L  D  W  I  F  *  H  I  S  R  F  I  I  F  I  P  L  V  S  V  R  D  T  P  L  L  N  I  L  S  W :   Y  R  N  V  A  P  D  P  Y  S  I  L  V  S  E  R  D  T  R  S  I  F  Y  P  G  V  G  T  *  H  P  I  H  I  L  S  W  Y  R  N  V  A  P  D  P  Y  S  I  L  V  S  E   : R  D  T  R  S  I  F  Y  P  G  T  G  T  W  H  P  I   : P  S  I  P  L  L  *  F  I  K  P  S  S  I  P  R  H  H  H  *  *  </second_frame>
            <third_frame>   Y  V  L  S  N  I  I  K  S  T  N  I  L  S  M  Q  H  L  Q  L  P  *  P  L  V  T  T  P  S  T  S  M  R  T  H  T  S  S  S  Y  S  F  G  N  L  V  H  *  I  G  Y  F  N  I  F  Q  D  S  L  S  L  F  P  S  C  R  Y  V  T  L  R  S  S  I  Y  Y  P   : G  T  G  T  W  H  P  I  H  I  L  S  W  C  R  N  V  T  P  D  P  Y  S  I  L  V  S  E  R  D  T  R  S  I  F  Y  P  G  T  G  T  W  H  P  I  H  I  L  S  W  C  Q  N  :  V  T  P  D  P  Y  S  I  L  V  P  E  R  G  T  R  S  :  H  Q  S  H  Y  F  N  S  S  S  L  L  L  Y  Q  G  I  I  I  N  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19681" stop="19594"/>
                    <exon start="19479" stop="19322"/>
                    <exon start="13339" stop="13289"/>
                    <exon start="13203" stop="13141"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IGYFNIFQDSLSLFPSCRYVTLRSSIYYPGTGTWHPIHILSWCRNVTPDPYSILVSERDTRSIFYPGTGTWHPIHILSWCQNVTPDPYSILVPERGTRSHQSHYFNSSSLLLYQGIIINN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="17500" e_stop="17010"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.933"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.933">
            <gDNA_exon_boundary e_start="17500" e_stop="17010" e_length="491"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17500" stop="17010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U575264" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACCCAATTCAGCATGCAATGTCTTCCAAAACTTAGAAGTAAACTGCGTACCTCTATCTGATATGATGGATAGTGGAACCCCATGCAATCGCACCACTTCCGAGATGTAAAGTTTGGCTAACTTTTCTGCATTGTAAGTCACCTTGACCGGAATGAAATGAGCAGATTTAGTTAACCTATCAACAATCACCCAAATGGAGTCATACTTACCCATTGTCTTCGGAAGACCAACCACAAAATCCATTGCAATTCTTTCCCACTTCCATTCCGGAATGGGCATTCTCTGAAGTGTTCCTCCGGGCCTTTGGTGTTCATACTTTACTTGTTGACAGTTTGGACATTTGGCAATAAAATCCACAATGTCGCGCTTCATTCTACTCCACCAAAAGTGTTGTTTTAGGTCACGATACATCTTGGTTGCACCCGGATGTATAGAATACCTTGAACTATGAGCTTCTGTCAGAATAGTGTTGATCAAATCATCAACACGGG</gDNA_template>
            <first_frame> T  Q  F  S  M  Q  C  L  P  K  L  R  S  K  L  R  T  S  I  *  Y  D  G  *  W  N  P  M  Q  S  H  H  F  R  D  V  K  F  G  *  L  F  C  I  V  S  H  L  D  R  N  E  M  S  R  F  S  *  P  I  N  N  H  P  N  G  V  I  L  T  H  C  L  R  K  T  N  H  K  I  H  C  N  S  F  P  L  P  F  R  N  G  H  S  L  K  C  S  S  G  P  L  V  F  I  L  Y  L  L  T  V  W  T  F  G  N  K  I  H  N  V  A  L  H  S  T  P  P  K  V  L  F  *  V  T  I  H  L  G  C  T  R  M  Y  R  I  P  *  T  M  S  F  C  Q  N  S  V  D  Q  I  I  N  T   </first_frame>
            <second_frame>  P  N  S  A  C  N  V  F  Q  N  L  E  V  N  C  V  P  L  S  D  M  M  D  S  G  T  P  C  N  R  T  T  S  E  M  *  S  L  A  N  F  S  A  L  *  V  T  L  T  G  M  K  *  A  D  L  V  N  L  S  T  I  T  Q  M  E  S  Y  L  P  I  V  F  G  R  P  T  T  K  S  I  A  I  L  S  H  F  H  S  G  M  G  I  L  *  S  V  P  P  G  L  W  C  S  Y  F  T  C  *  Q  F  G  H  L  A  I  K  S  T  M  S  R  F  I  L  L  H  Q  K  C  C  F  R  S  R  Y  I  L  V  A  P  G  C  I  E  Y  L  E  L  *  A  S  V  R  I  V  L  I  K  S  S  T  R  </second_frame>
            <third_frame>   P  I  Q  H  A  M  S  S  K  T  *  K  *  T  A  Y  L  Y  L  I  *  W  I  V  E  P  H  A  I  A  P  L  P  R  C  K  V  W  L  T  F  L  H  C  K  S  P  *  P  E  *  N  E  Q  I  *  L  T  Y  Q  Q  S  P  K  W  S  H  T  Y  P  L  S  S  E  D  Q  P  Q  N  P  L  Q  F  F  P  T  S  I  P  E  W  A  F  S  E  V  F  L  R  A  F  G  V  H  T  L  L  V  D  S  L  D  I  W  Q  *  N  P  Q  C  R  A  S  F  Y  S  T  K  S  V  V  L  G  H  D  T  S  W  L  H  P  D  V  *  N  T  L  N  Y  E  L  L  S  E  *  C  *  S  N  H  Q  H  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17326" stop="17102"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PINNHPNGVILTHCLRKTNHKIHCNSFPLPFRNGHSLKCSSGPLVFILYLLTVWTFGNKIHNVALHSTPPKVLF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="17715" e_stop="17539"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.932"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.932">
            <gDNA_exon_boundary e_start="17715" e_stop="17539" e_length="177"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17715" stop="17539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U599718" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTACATCTCCTCCCATATAATGCTTCAAATGGGGTCATATCAATGCTCGAGTGATAGCTATTATTGTATGAAAATTCCGCTAAGGGTAAGAAGCTATCCCAATGGCCACCAAATTCTATCACACACGCACGGAGCATATCCTCCAACACTTGAATCGTTCGCTCAGACTGACCATCG</gDNA_template>
            <first_frame> L  H  L  L  P  Y  N  A  S  N  G  V  I  S  M  L  E  *  *  L  L  L  Y  E  N  S  A  K  G  K  K  L  S  Q  W  P  P  N  S  I  T  H  A  R  S  I  S  S  N  T  *  I  V  R  S  D  *  P  S </first_frame>
            <second_frame>  Y  I  S  S  H  I  M  L  Q  M  G  S  Y  Q  C  S  S  D  S  Y  Y  C  M  K  I  P  L  R  V  R  S  Y  P  N  G  H  Q  I  L  S  H  T  H  G  A  Y  P  P  T  L  E  S  F  A  Q  T  D  H   </second_frame>
            <third_frame>   T  S  P  P  I  *  C  F  K  W  G  H  I  N  A  R  V  I  A  I  I  V  *  K  F  R  *  G  *  E  A  I  P  M  A  T  K  F  Y  H  T  R  T  E  H  I  L  Q  H  L  N  R  S  L  R  L  T  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0101H16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="13626" PGL_stop="14578"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13626" e_stop="14578"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.955"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.955">
            <gDNA_exon_boundary e_start="13626" e_stop="14578" e_length="953"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13626" stop="14578"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U580377" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTAATGAACTAAATTTCCAAATGAGTATGATGAGGAGGTGTGAGTCCTCATTGATGTGCTTGGTGTTGTAACCAAGGGTTATGGTAACTGTAAATGCTGCATGCTAAGGATATTAGTTGATTTTATGATATTGCTTAATACATACTGTTTTCTATTTTGAGTTGGCCGATGATATCTACTCAGTACCCGTGTTTTGTACTGACCCCTACTTTTATGTTTTTCTTGTTGTTATTTGTGGAGTGCAGCAAACGTGCCGTCATCTTCGACTCAACAGTAACTCAAGCCAGTCTTCGTCACACCGGATCTTCAGGGTGAGCTAACGCTTTTAGCTTGGACTGGATCTTCTCCTTCATGTCTTGATGCCTTGAACTTCCGGCATGGACTAGCTTCTTATGTATTTTTAGCTTCTTAGAAACTCTTAGAATTAGTAGTTGAAAGTAGATGTTCTTGTGATGATGACTTCCAGGTTTTGGGAATAATAGATGTTGAATATTGATAGTTATTGAATTGGTTTTTATTAATGAGTTTAAGTCTTTCGCATTACTTTCTGTTGTTATTACATTGAAATGTTAAGGTTTAGATTGGTTGGTTCGCTCACATAGGAGGGTAAGTGTGGGTGCCAGTCGCGGCCTGGATTTGGGTCGTGACAAAACTTGGTATCAGAGCATTAGGTTCGTTGGTCTCATCACACAAGAACAGGTCTAGTAGGGTCTTAAGGAACGGTAGGGGGATGCCTTTACTTTTCCTTGAGAGGCTATAAGACTTTAGGAAAATTCCATTCTTTCATTCTTTCTTTCGTGCTACTACTTGAGTCCAATTGGTATCTAGGCGATACGAATTGGTATCTGACCATCTTCACTCTATTTCGCGGATGGTTAGAACTAGAGCAACGACTGCGCCAACACCAACATCGGCAAGACAAGAAGCGTCTGAGCCAGCCACTGGGGCTGTGG</gDNA_template>
            <first_frame> L  M  N  *  I  S  K  *  V  *  *  G  G  V  S  P  H  *  C  A  W  C  C  N  Q  G  L  W  *  L  *  M  L  H  A  K  D  I  S  *  F  Y  D  I  A  *  Y  I  L  F  S  I  L  S  W  P  M  I  S  T  Q  Y  P  C  F  V  L  T  P  T  F  M  F  F  L  L  L  F  V  E  C  S  K  R  A  V  I  F  D  S  T  V  T  Q  A  S  L  R  H  T  G  S  S  G  *  A  N  A  F  S  L  D  W  I  F  S  F  M  S  *  C  L  E  L  P  A  W  T  S  F  L  C  I  F  S  F  L  E  T  L  R  I  S  S  *  K  *  M  F  L  *  *  *  L  P  G  F  G  N  N  R  C  *  I  L  I  V  I  E  L  V  F  I  N  E  F  K  S  F  A  L  L  S  V  V  I  T  L  K  C  *  G  L  D  W  L  V  R  S  H  R  R  V  S  V  G  A  S  R  G  L  D  L  G  R  D  K  T  W  Y  Q  S  I  R  F  V  G  L  I  T  Q  E  Q  V  *  *  G  L  K  E  R  *  G  D  A  F  T  F  P  *  E  A  I  R  L  *  E  N  S  I  L  S  F  F  L  S  C  Y  Y  L  S  P  I  G  I  *  A  I  R  I  G  I  *  P  S  S  L  Y  F  A  D  G  *  N  *  S  N  D  C  A  N  T  N  I  G  K  T  R  S  V  *  A  S  H  W  G  C   </first_frame>
            <second_frame>  *  *  T  K  F  P  N  E  Y  D  E  E  V  *  V  L  I  D  V  L  G  V  V  T  K  G  Y  G  N  C  K  C  C  M  L  R  I  L  V  D  F  M  I  L  L  N  T  Y  C  F  L  F  *  V  G  R  *  Y  L  L  S  T  R  V  L  Y  *  P  L  L  L  C  F  S  C  C  Y  L  W  S  A  A  N  V  P  S  S  S  T  Q  Q  *  L  K  P  V  F  V  T  P  D  L  Q  G  E  L  T  L  L  A  W  T  G  S  S  P  S  C  L  D  A  L  N  F  R  H  G  L  A  S  Y  V  F  L  A  S  *  K  L  L  E  L  V  V  E  S  R  C  S  C  D  D  D  F  Q  V  L  G  I  I  D  V  E  Y  *  *  L  L  N  W  F  L  L  M  S  L  S  L  S  H  Y  F  L  L  L  L  H  *  N  V  K  V  *  I  G  W  F  A  H  I  G  G  *  V  W  V  P  V  A  A  W  I  W  V  V  T  K  L  G  I  R  A  L  G  S  L  V  S  S  H  K  N  R  S  S  R  V  L  R  N  G  R  G  M  P  L  L  F  L  E  R  L  *  D  F  R  K  I  P  F  F  H  S  F  F  R  A  T  T  *  V  Q  L  V  S  R  R  Y  E  L  V  S  D  H  L  H  S  I  S  R  M  V  R  T  R  A  T  T  A  P  T  P  T  S  A  R  Q  E  A  S  E  P  A  T  G  A  V  </second_frame>
            <third_frame>   N  E  L  N  F  Q  M  S  M  M  R  R  C  E  S  S  L  M  C  L  V  L  *  P  R  V  M  V  T  V  N  A  A  C  *  G  Y  *  L  I  L  *  Y  C  L  I  H  T  V  F  Y  F  E  L  A  D  D  I  Y  S  V  P  V  F  C  T  D  P  Y  F  Y  V  F  L  V  V  I  C  G  V  Q  Q  T  C  R  H  L  R  L  N  S  N  S  S  Q  S  S  S  H  R  I  F  R  V  S  *  R  F  *  L  G  L  D  L  L  L  H  V  L  M  P  *  T  S  G  M  D  *  L  L  M  Y  F  *  L  L  R  N  S  *  N  *  *  L  K  V  D  V  L  V  M  M  T  S  R  F  W  E  *  *  M  L  N  I  D  S  Y  *  I  G  F  Y  *  *  V  *  V  F  R  I  T  F  C  C  Y  Y  I  E  M  L  R  F  R  L  V  G  S  L  T  *  E  G  K  C  G  C  Q  S  R  P  G  F  G  S  *  Q  N  L  V  S  E  H  *  V  R  W  S  H  H  T  R  T  G  L  V  G  S  *  G  T  V  G  G  C  L  Y  F  S  L  R  G  Y  K  T  L  G  K  F  H  S  F  I  L  S  F  V  L  L  L  E  S  N  W  Y  L  G  D  T  N  W  Y  L  T  I  F  T  L  F  R  G  W  L  E  L  E  Q  R  L  R  Q  H  Q  H  R  Q  D  K  K  R  L  S  Q  P  L  G  L  W </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14342" stop="14578"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTVGGCLYFSLRGYKTLGKFHSFILSFVLLLESNWYLGDTNWYLTIFTLFRGWLELEQRLRQHQHRQDKKRLSQPLGLW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="14616" PGL_stop="16106"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14616" e_stop="15488"/>
            <exon e_start="15543" e_stop="16106"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.907"/>
          <exon-only e_score="0.947"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.907">
            <gDNA_exon_boundary e_start="14616" e_stop="15488" e_length="873"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="15489" i_stop="15542" i_length="54"/>
          </intron>
          <exon e_serial="2" e_score="0.947">
            <gDNA_exon_boundary e_start="15543" e_stop="16106" e_length="564"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14616" stop="15488"/>
              <exon start="15543" stop="16106"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U579265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14650" stop="15205"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590648" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCGTGGGAGGACGTCCTCTAGAGGAAGAGGACGAGCACCGATCCCATCTGGTACTAGGGCGGTGACTCCTCCACCGACTGAGGAAGTGATAAGAGAGGGGGAGGATGGGGTGAATGAACAAGTGCAGAATGAGGAAATGCCACCCCAACCTACCCCAGAGATGATCAATCGGGTTCTGGCTAATCTTAGCGGGTTATCTGATCAGGGCCAGATACCCCCAGTGTTTTCTGCACCAGCACCTCAGGCTCCGGAGGTACAACATGCGGCTACTATGGCTCCCCGCATGGATGTTCCATTGGAAATAGGCACGTTTCCACGTCTGACTACTGGGCCTATAATGACAAGTGATCAGCATGAACTTTTCAGTAAGTTCTTGAAATTGAAATCTCCAGTCTTCAAGGGTGCTGAATCGGAGGATGCTTATGATTTTCTGGTTGACTGTCACGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTGGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATATTGAGTGTCAACCAATAGAGGCACCACCTATGACTTGGGCCTCGTTCTCTAGCTTGTTTATGGAGAAGTATATCCCCCGGACTTTGAGGGATAGGAAAAGGGATGAGTTCCTGAGCCTAGAGCAAGGTAGCATGTCGGTTAATGCTTATGAGGCTAAGTTCCGTGCACTATCCAGGTATGCCACTCAACTTTGTTTCAGTCCACAAGAGCGGATTCGTCGTTTTGTGAAAGGGTTGAGGTCAGAGTTGCGGATTTCAGCCTTACAGGTAGCGGCTACTGCAAAATCCTTCCAAGAAGTGGTAGATTTCGTGGTAGAGGTGGAAGGAGTGAA : AAGCCCAACTTCAAGAGTTGTTGAGCAAAGGCTTCATTAGACCAAGTGCATCTCCTTGGGGTGCTCCGATTTTGTTTGTGAAGAAGAAGGATGGGAGTTTTCGAATGTGTATAGACTACAGACAACTAAACAAGGTAACCATAAAGAACAAGTATCCTCTTCCCCGCATTGATGACTTGTTCGATCAGTTACAAGGTGCTTGTGTCTTCTCTAAGATTGACTTGAGATCCGGTTATCATCAATTGAAAATATGGGCAACGGATGTGCCAAAGACTGCTTTTCGAACGAGGTATGGGCATTACGAATTTGTAGTGATGTCTTTTGGTCTTACGAATGCCCCTGCTGCGTTCATGAGCTTGATGAACGGGATTTTTAAGCCATATTTGGACCTCTTCGTGATCGTATTTATTGATGATATATTGGTATACTCAAAGAGCAAGAAGGAACATGAAGAGCATTTGAGAATGGTATTGGAAATGTTAAGGGAGAAAAAGCTTTATGCCAAGTTCTCTAAGTGTGAGTTTTGGCTAGATGCAGTGTCCTTCTTGGGACACGTGGTTTCTA</gDNA_template>
            <first_frame> S  W  E  D  V  L  *  R  K  R  T  S  T  D  P  I  W  Y  *  G  G  D  S  S  T  D  *  G  S  D  K  R  G  G  G  W  G  E  *  T  S  A  E  *  G  N  A  T  P  T  Y  P  R  D  D  Q  S  G  S  G  *  S  *  R  V  I  *  S  G  P  D  T  P  S  V  F  C  T  S  T  S  G  S  G  G  T  T  C  G  Y  Y  G  S  P  H  G  C  S  I  G  N  R  H  V  S  T  S  D  Y  W  A  Y  N  D  K  *  S  A  *  T  F  Q  *  V  L  E  I  E  I  S  S  L  Q  G  C  *  I  G  G  C  L  *  F  S  G  *  L  S  R  A  T  T  Q  D  G  Y  S  R  T  V  W  C  G  V  C  D  L  S  V  S  R  E  R  Q  N  V  V  A  V  T  Y  *  V  S  T  N  R  G  T  T  Y  D  L  G  L  V  L  *  L  V  Y  G  E  V  Y  P  P  D  F  E  G  *  E  K  G  *  V  P  E  P  R  A  R  *  H  V  G  *  C  L  *  G  *  V  P  C  T  I  Q  V  C  H  S  T  L  F  Q  S  T  R  A  D  S  S  F  C  E  R  V  E  V  R  V  A  D  F  S  L  T  G  S  G  Y  C  K  I  L  P  R  S  G  R  F  R  G  R  G  G  R  S  E  :  K  P  N  F  K  S  C  *  A  K  A  S  L  D  Q  V  H  L  L  G  V  L  R  F  C  L  *  R  R  R  M  G  V  F  E  C  V  *  T  T  D  N  *  T  R  *  P  *  R  T  S  I  L  F  P  A  L  M  T  C  S  I  S  Y  K  V  L  V  S  S  L  R  L  T  *  D  P  V  I  I  N  *  K  Y  G  Q  R  M  C  Q  R  L  L  F  E  R  G  M  G  I  T  N  L  *  *  C  L  L  V  L  R  M  P  L  L  R  S  *  A  *  *  T  G  F  L  S  H  I  W  T  S  S  *  S  Y  L  L  M  I  Y  W  Y  T  Q  R  A  R  R  N  M  K  S  I  *  E  W  Y  W  K  C  *  G  R  K  S  F  M  P  S  S  L  S  V  S  F  G  *  M  Q  C  P  S  W  D  T  W  F  L </first_frame>
            <second_frame>  R  G  R  T  S  S  R  G  R  G  R  A  P  I  P  S  G  T  R  A  V  T  P  P  P  T  E  E  V  I  R  E  G  E  D  G  V  N  E  Q  V  Q  N  E  E  M  P  P  Q  P  T  P  E  M  I  N  R  V  L  A  N  L  S  G  L  S  D  Q  G  Q  I  P  P  V  F  S  A  P  A  P  Q  A  P  E  V  Q  H  A  A  T  M  A  P  R  M  D  V  P  L  E  I  G  T  F  P  R  L  T  T  G  P  I  M  T  S  D  Q  H  E  L  F  S  K  F  L  K  L  K  S  P  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  V  D  C  H  E  L  L  H  K  M  G  I  V  E  R  F  G  V  E  F  V  T  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  I  E  C  Q  P  I  E  A  P  P  M  T  W  A  S  F  S  S  L  F  M  E  K  Y  I  P  R  T  L  R  D  R  K  R  D  E  F  L  S  L  E  Q  G  S  M  S  V  N  A  Y  E  A  K  F  R  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  R  I  R  R  F  V  K  G  L  R  S  E  L  R  I  S  A  L  Q  V  A  A  T  A  K  S  F  Q  E  V  V  D  F  V  V  E  V  E  G  V  K :   S  P  T  S  R  V  V  E  Q  R  L  H  *  T  K  C  I  S  L  G  C  S  D  F  V  C  E  E  E  G  W  E  F  S  N  V  Y  R  L  Q  T  T  K  Q  G  N  H  K  E  Q  V  S  S  S  P  H  *  *  L  V  R  S  V  T  R  C  L  C  L  L  *  D  *  L  E  I  R  L  S  S  I  E  N  M  G  N  G  C  A  K  D  C  F  S  N  E  V  W  A  L  R  I  C  S  D  V  F  W  S  Y  E  C  P  C  C  V  H  E  L  D  E  R  D  F  *  A  I  F  G  P  L  R  D  R  I  Y  *  *  Y  I  G  I  L  K  E  Q  E  G  T  *  R  A  F  E  N  G  I  G  N  V  K  G  E  K  A  L  C  Q  V  L  *  V  *  V  L  A  R  C  S  V  L  L  G  T  R  G  F   </second_frame>
            <third_frame>   V  G  G  R  P  L  E  E  E  D  E  H  R  S  H  L  V  L  G  R  *  L  L  H  R  L  R  K  *  *  E  R  G  R  M  G  *  M  N  K  C  R  M  R  K  C  H  P  N  L  P  Q  R  *  S  I  G  F  W  L  I  L  A  G  Y  L  I  R  A  R  Y  P  Q  C  F  L  H  Q  H  L  R  L  R  R  Y  N  M  R  L  L  W  L  P  A  W  M  F  H  W  K  *  A  R  F  H  V  *  L  L  G  L  *  *  Q  V  I  S  M  N  F  S  V  S  S  *  N  *  N  L  Q  S  S  R  V  L  N  R  R  M  L  M  I  F  W  L  T  V  T  S  Y  Y  T  R  W  V  *  *  N  G  L  V  W  S  L  *  L  I  S  F  K  G  T  P  K  C  G  G  G  H  I  L  S  V  N  Q  *  R  H  H  L  *  L  G  P  R  S  L  A  C  L  W  R  S  I  S  P  G  L  *  G  I  G  K  G  M  S  S  *  A  *  S  K  V  A  C  R  L  M  L  M  R  L  S  S  V  H  Y  P  G  M  P  L  N  F  V  S  V  H  K  S  G  F  V  V  L  *  K  G  *  G  Q  S  C  G  F  Q  P  Y  R  *  R  L  L  Q  N  P  S  K  K  W  *  I  S  W  *  R  W  K  E  *   : K  A  Q  L  Q  E  L  L  S  K  G  F  I  R  P  S  A  S  P  W  G  A  P  I  L  F  V  K  K  K  D  G  S  F  R  M  C  I  D  Y  R  Q  L  N  K  V  T  I  K  N  K  Y  P  L  P  R  I  D  D  L  F  D  Q  L  Q  G  A  C  V  F  S  K  I  D  L  R  S  G  Y  H  Q  L  K  I  W  A  T  D  V  P  K  T  A  F  R  T  R  Y  G  H  Y  E  F  V  V  M  S  F  G  L  T  N  A  P  A  A  F  M  S  L  M  N  G  I  F  K  P  Y  L  D  L  F  V  I  V  F  I  D  D  I  L  V  Y  S  K  S  K  K  E  H  E  E  H  L  R  M  V  L  E  M  L  R  E  K  K  L  Y  A  K  F  S  K  C  E  F  W  L  D  A  V  S  F  L  G  H  V  V  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14617" stop="15488"/>
                    <exon start="15543" stop="15582"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>909</number_coding_nucleotides>
                  <number_encoded_amino_acids>303</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGRTSSRGRGRAPIPSGTRAVTPPPTEEVIREGEDGVNEQVQNEEMPPQPTPEMINRVLANLSGLSDQGQIPPVFSAPAPQAPEVQHAATMAPRMDVPLEIGTFPRLTTGPIMTSDQHELFSKFLKLKSPVFKGAESEDAYDFLVDCHELLHKMGIVERFGVEFVTYQFQGNAKMWWRSHIECQPIEAPPMTWASFSSLFMEKYIPRTLRDRKRDEFLSLEQGSMSVNAYEAKFRALSRYATQLCFSPQERIRRFVKGLRSELRISALQVAATAKSFQEVVDFVVEVEGVKSPTSRVVEQRLH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="29402" PGL_stop="25352"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29402" e_stop="29345"/>
            <exon e_start="29069" e_stop="28947"/>
            <exon e_start="28583" e_stop="28508"/>
            <exon e_start="27365" e_stop="26683"/>
            <exon e_start="25670" e_stop="25606"/>
            <exon e_start="25472" e_stop="25352"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="0.983"/>
          <exon-intron don_prob="0.953" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.927" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.770" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="0.959"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="29402" e_stop="29345" e_length="58"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="29344" i_stop="29070" i_length="275"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="29069" e_stop="28947" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.953" acc_prob="0.997">
            <gDNA_intron_boundary i_start="28946" i_stop="28584" i_length="363"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28583" e_stop="28508" e_length="76"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.927">
            <gDNA_intron_boundary i_start="28507" i_stop="27366" i_length="1142"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="27365" e_stop="26683" e_length="683"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="26682" i_stop="25671" i_length="1012"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="25670" e_stop="25606" e_length="65"/>
          </exon>
          <intron i_serial="5" don_prob="0.770" acc_prob="0.987">
            <gDNA_intron_boundary i_start="25605" i_stop="25473" i_length="133"/>
          </intron>
          <exon e_serial="6" e_score="0.959">
            <gDNA_exon_boundary e_start="25472" e_stop="25352" e_length="121"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29402" stop="29345"/>
              <exon start="29069" stop="28947"/>
              <exon start="28583" stop="28508"/>
              <exon start="27365" stop="26683"/>
              <exon start="25670" stop="25606"/>
              <exon start="25472" stop="25352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585004" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACATGATCCATTTGGCGGACAAGGTTTTATGCTGCCTTTCGGTCCTCCGATGCAGAG : GGACCTTGCAGCAGACTTTGGGATGGGATTTAATGCTGGCCCACCAATCATGAGTAGAGAAGAATTTGAGGCTAGAAAGGCTGATCTGAGAAGGAAACGTGAGAGCGAGAGACGTGGAGAGAG : GGAGTTCCCTAAAGACAGGGAGCATGCAAGGGATGTTGGGAGCACTGCTGATGGTCCTTCCCTGAAACCCAAATCT : AAAGCTCCGTCGAGCTCGAGCCGTCCCCGCCAACCTGAGAGGCCTTCCCCAGACCTTGACCACCGCGTTGATGACCACCGCCGACCTGAGAGACCATCGCCAGATCTTGACCACCGCCGCCGAGCTGAGAGGCCATCGCCAGACCTTGACCACCGCCGCCGATCTGAGAGGCCATCGCCAGACCATGATTACCCCCGCCGACCTGAGAGGCTGTCTCCAGATCGCCGATTGCGTGACCCTGAACTTCCTCGCCCTTCTTCCAAGAAAAAGTATGAAGATTATGACGATCATCACCATGAGGACCGCCACCGCCATGAGGACCGCCATCAGCGCGGTACCCATCGCAGTAGCAGTAGCCATCACCGTTCAGAATCTTCAGCTAACGCCAAACCATCCTCCGTAGGCCCATCTGAACCGCAATCCAAATCCGTTGATAAGAGGAAGGCCAGTGTTTTTTCTCGTATCAGTTTCCCAGCCGAAGATTCAGCAGCAGCTTCAAAGAAGCGAAAGGTGCCATCCTCGAGTGAAGTACCAGTGAGTTCTTCAGCGAGCCACAGGGGTGGCACAACGAATGGGTATCATGGGGAGTACAAAACGACTACTGGATCAAGGAAGAGTGCCACTGTGAGTGTGGATTACGAGAGTAGTGATGATGATCGGCACTTCAAAAGAAAGCCTTCAAG : GTTGAGATAGTATATGATGATGGGGTGACTGGATCAAAAAGAATCTTGCATGGATATAAATACAG : ATTCAGAATGCGCGGGCATCTTTTTAACATTCAAATCTGGATAGAGTTTCCTGAGTGATACCATCTACTTCACAAAGCTCTCGGTGCAACGGTATGAGTTTTTGGTTTGATCCTTGAGAGA</gDNA_template>
            <first_frame> H  M  I  H  L  A  D  K  V  L  C  C  L  S  V  L  R  C  R   : G  T  L  Q  Q  T  L  G  W  D  L  M  L  A  H  Q  S  *  V  E  K  N  L  R  L  E  R  L  I  *  E  G  N  V  R  A  R  D  V  E  R   : G  S  S  L  K  T  G  S  M  Q  G  M  L  G  A  L  L  M  V  L  P  *  N  P  N  L :   K  L  R  R  A  R  A  V  P  A  N  L  R  G  L  P  Q  T  L  T  T  A  L  M  T  T  A  D  L  R  D  H  R  Q  I  L  T  T  A  A  E  L  R  G  H  R  Q  T  L  T  T  A  A  D  L  R  G  H  R  Q  T  M  I  T  P  A  D  L  R  G  C  L  Q  I  A  D  C  V  T  L  N  F  L  A  L  L  P  R  K  S  M  K  I  M  T  I  I  T  M  R  T  A  T  A  M  R  T  A  I  S  A  V  P  I  A  V  A  V  A  I  T  V  Q  N  L  Q  L  T  P  N  H  P  P  *  A  H  L  N  R  N  P  N  P  L  I  R  G  R  P  V  F  F  L  V  S  V  S  Q  P  K  I  Q  Q  Q  L  Q  R  S  E  R  C  H  P  R  V  K  Y  Q  *  V  L  Q  R  A  T  G  V  A  Q  R  M  G  I  M  G  S  T  K  R  L  L  D  Q  G  R  V  P  L  *  V  W  I  T  R  V  V  M  M  I  G  T  S  K  E  S  L  Q   : G  *  D  S  I  *  *  W  G  D  W  I  K  K  N  L  A  W  I  *  I  Q  :  I  Q  N  A  R  A  S  F  *  H  S  N  L  D  R  V  S  *  V  I  P  S  T  S  Q  S  S  R  C  N  G  M  S  F  W  F  D  P  *  E  </first_frame>
            <second_frame>  T  *  S  I  W  R  T  R  F  Y  A  A  F  R  S  S  D  A  E  :  G  P  C  S  R  L  W  D  G  I  *  C  W  P  T  N  H  E  *  R  R  I  *  G  *  K  G  *  S  E  K  E  T  *  E  R  E  T  W  R  E  :  G  V  P  *  R  Q  G  A  C  K  G  C  W  E  H  C  *  W  S  F  P  E  T  Q  I   : *  S  S  V  E  L  E  P  S  P  P  T  *  E  A  F  P  R  P  *  P  P  R  *  *  P  P  P  T  *  E  T  I  A  R  S  *  P  P  P  P  S  *  E  A  I  A  R  P  *  P  P  P  P  I  *  E  A  I  A  R  P  *  L  P  P  P  T  *  E  A  V  S  R  S  P  I  A  *  P  *  T  S  S  P  F  F  Q  E  K  V  *  R  L  *  R  S  S  P  *  G  P  P  P  P  *  G  P  P  S  A  R  Y  P  S  Q  *  Q  *  P  S  P  F  R  I  F  S  *  R  Q  T  I  L  R  R  P  I  *  T  A  I  Q  I  R  *  *  E  E  G  Q  C  F  F  S  Y  Q  F  P  S  R  R  F  S  S  S  F  K  E  A  K  G  A  I  L  E  *  S  T  S  E  F  F  S  E  P  Q  G  W  H  N  E  W  V  S  W  G  V  Q  N  D  Y  W  I  K  E  E  C  H  C  E  C  G  L  R  E  *  *  *  *  S  A  L  Q  K  K  A  F  K  :  V  E  I  V  Y  D  D  G  V  T  G  S  K  R  I  L  H  G  Y  K  Y  R :   F  R  M  R  G  H  L  F  N  I  Q  I  W  I  E  F  P  E  *  Y  H  L  L  H  K  A  L  G  A  T  V  *  V  F  G  L  I  L  E  R </second_frame>
            <third_frame>   H  D  P  F  G  G  Q  G  F  M  L  P  F  G  P  P  M  Q  R :   D  L  A  A  D  F  G  M  G  F  N  A  G  P  P  I  M  S  R  E  E  F  E  A  R  K  A  D  L  R  R  K  R  E  S  E  R  R  G  E  R :   E  F  P  K  D  R  E  H  A  R  D  V  G  S  T  A  D  G  P  S  L  K  P  K  S  :  K  A  P  S  S  S  S  R  P  R  Q  P  E  R  P  S  P  D  L  D  H  R  V  D  D  H  R  R  P  E  R  P  S  P  D  L  D  H  R  R  R  A  E  R  P  S  P  D  L  D  H  R  R  R  S  E  R  P  S  P  D  H  D  Y  P  R  R  P  E  R  L  S  P  D  R  R  L  R  D  P  E  L  P  R  P  S  S  K  K  K  Y  E  D  Y  D  D  H  H  H  E  D  R  H  R  H  E  D  R  H  Q  R  G  T  H  R  S  S  S  S  H  H  R  S  E  S  S  A  N  A  K  P  S  S  V  G  P  S  E  P  Q  S  K  S  V  D  K  R  K  A  S  V  F  S  R  I  S  F  P  A  E  D  S  A  A  A  S  K  K  R  K  V  P  S  S  S  E  V  P  V  S  S  S  A  S  H  R  G  G  T  T  N  G  Y  H  G  E  Y  K  T  T  T  G  S  R  K  S  A  T  V  S  V  D  Y  E  S  S  D  D  D  R  H  F  K  R  K  P  S  R :   L  R  *  Y  M  M  M  G  *  L  D  Q  K  E  S  C  M  D  I  N  T   : D  S  E  C  A  G  I  F  L  T  F  K  S  G  *  S  F  L  S  D  T  I  Y  F  T  K  L  S  V  Q  R  Y  E  F  L  V  *  S  L  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29400" stop="29345"/>
                    <exon start="29069" stop="28947"/>
                    <exon start="28583" stop="28508"/>
                    <exon start="27365" stop="26683"/>
                    <exon start="25670" stop="25661"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>945</number_coding_nucleotides>
                  <number_encoded_amino_acids>315</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HDPFGGQGFMLPFGPPMQRDLAADFGMGFNAGPPIMSREEFEARKADLRRKRESERRGEREFPKDREHARDVGSTADGPSLKPKSKAPSSSSRPRQPERPSPDLDHRVDDHRRPERPSPDLDHRRRAERPSPDLDHRRRSERPSPDHDYPRRPERLSPDRRLRDPELPRPSSKKKYEDYDDHHHEDRHRHEDRHQRGTHRSSSSHHRSESSANAKPSSVGPSEPQSKSVDKRKASVFSRISFPAEDSAAASKKRKVPSSSEVPVSSSASHRGGTTNGYHGEYKTTTGSRKSATVSVDYESSDDDRHFKRKPSRLR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="30999" PGL_stop="29530"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30999" e_stop="30936"/>
            <exon e_start="30859" e_stop="30711"/>
            <exon e_start="30525" e_stop="30361"/>
            <exon e_start="30255" e_stop="29941"/>
            <exon e_start="29794" e_stop="29753"/>
            <exon e_start="29611" e_stop="29530"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.862" acc_prob="0.765" e_score="0.984"/>
          <exon-intron don_prob="0.101" acc_prob="0.738" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.307" acc_prob="0.991" e_score="0.997"/>
          <exon-intron don_prob="0.994" acc_prob="0.987" e_score="0.952"/>
          <exon-only e_score="0.951"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="30999" e_stop="30936" e_length="64"/>
          </exon>
          <intron i_serial="1" don_prob="0.862" acc_prob="0.765">
            <gDNA_intron_boundary i_start="30935" i_stop="30860" i_length="76"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="30859" e_stop="30711" e_length="149"/>
          </exon>
          <intron i_serial="2" don_prob="0.101" acc_prob="0.738">
            <gDNA_intron_boundary i_start="30710" i_stop="30526" i_length="185"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="30525" e_stop="30361" e_length="165"/>
          </exon>
          <intron i_serial="3" don_prob="0.971" acc_prob="0.988">
            <gDNA_intron_boundary i_start="30360" i_stop="30256" i_length="105"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="30255" e_stop="29941" e_length="315"/>
          </exon>
          <intron i_serial="4" don_prob="0.307" acc_prob="0.991">
            <gDNA_intron_boundary i_start="29940" i_stop="29795" i_length="146"/>
          </intron>
          <exon e_serial="5" e_score="0.952">
            <gDNA_exon_boundary e_start="29794" e_stop="29753" e_length="42"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.987">
            <gDNA_intron_boundary i_start="29752" i_stop="29612" i_length="141"/>
          </intron>
          <exon e_serial="6" e_score="0.951">
            <gDNA_exon_boundary e_start="29611" e_stop="29530" e_length="82"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30999" stop="30936"/>
              <exon start="30859" stop="30711"/>
              <exon start="30525" stop="30361"/>
              <exon start="30255" stop="29941"/>
              <exon start="29794" stop="29753"/>
              <exon start="29611" stop="29530"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U569218" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGCAACCCCAGATGGTTCATATGCTTTACCAAGTGGTGCCAGTGCTGTTTTAAAGCCCAATGA : GGCTGCTTTTGAAAGAGAAGTTGAAGGGATGCCTTCTATACGTTCCGTTGGTGATCTTCCACAAGAGCTTCATTGTCCCTTGTGTAAAGAAGTAATGAAAGATGCAGTGTTGACAAGCAAGTGTTGTTTTAGCAGTTACTGCGATAAAT : GCATAAGGGATCATATCATCTCGAAGTCGGTGTGTGTCTGTGGGGCCACAAATATACTTGCTGATGACCTGTTACCCAACAAGACTGTGAGGGATACAATTAATAGAATATTGGAATCAAATAATAGCAGTGCAGAGCATGGGGGTAGTGCTCTCCAAGTTCAAG : ATATGGAGTCAGCGCGCATTCTCCCACCAAAGATTCCATCTCCTTCACAATCTGCAGCTTCAAGGGGTGAGCCGTTGCCACCACCACCACCTCCTCCACCTGTTAAGGAGGAAAATTCTAAAGCCCAGGAGATTGCAGAAGAGGGTAAGAATGGCAGTGCTTCTCAGCAAATGTTGGAAAGAGGAAGAACTTTGAAGGTTGCAGATGTTTCTGAAGCTACACACGAGTCCGTCAGTGTTAAAGAACCTGTATCCCCGGGGAGTGCTCCATTGGCTGATGAAGAGGTTCAGCAAAAGCCAGTAGTTGGGGAGGCAG : GAAAAAAAAAGAAGAAGAAAAAAACACGATTGCCTTTGAACC : CTGCTGCTGCTGAGATGCAGTGGAGAGCTGCACAAGATCTTGCTGCTGAGAATTATATGATGTCCATGGGTCTGCTGCCTAT</gDNA_template>
            <first_frame> W  Q  P  Q  M  V  H  M  L  Y  Q  V  V  P  V  L  F  *  S  P  M   : R  L  L  L  K  E  K  L  K  G  C  L  L  Y  V  P  L  V  I  F  H  K  S  F  I  V  P  C  V  K  K  *  *  K  M  Q  C  *  Q  A  S  V  V  L  A  V  T  A  I  N  :  A  *  G  I  I  S  S  R  S  R  C  V  S  V  G  P  Q  I  Y  L  L  M  T  C  Y  P  T  R  L  *  G  I  Q  L  I  E  Y  W  N  Q  I  I  A  V  Q  S  M  G  V  V  L  S  K  F  K  :  I  W  S  Q  R  A  F  S  H  Q  R  F  H  L  L  H  N  L  Q  L  Q  G  V  S  R  C  H  H  H  H  L  L  H  L  L  R  R  K  I  L  K  P  R  R  L  Q  K  R  V  R  M  A  V  L  L  S  K  C  W  K  E  E  E  L  *  R  L  Q  M  F  L  K  L  H  T  S  P  S  V  L  K  N  L  Y  P  R  G  V  L  H  W  L  M  K  R  F  S  K  S  Q  *  L  G  R  Q  :  E  K  K  R  R  R  K  K  H  D  C  L  *  T  :  L  L  L  L  R  C  S  G  E  L  H  K  I  L  L  L  R  I  I  *  C  P  W  V  C  C  L  </first_frame>
            <second_frame>  G  N  P  R  W  F  I  C  F  T  K  W  C  Q  C  C  F  K  A  Q  *  :  G  C  F  *  K  R  S  *  R  D  A  F  Y  T  F  R  W  *  S  S  T  R  A  S  L  S  L  V  *  R  S  N  E  R  C  S  V  D  K  Q  V  L  F  *  Q  L  L  R  *  M :   H  K  G  S  Y  H  L  E  V  G  V  C  L  W  G  H  K  Y  T  C  *  *  P  V  T  Q  Q  D  C  E  G  Y  N  *  *  N  I  G  I  K  *  *  Q  C  R  A  W  G  *  C  S  P  S  S  R :   Y  G  V  S  A  H  S  P  T  K  D  S  I  S  F  T  I  C  S  F  K  G  *  A  V  A  T  T  T  T  S  S  T  C  *  G  G  K  F  *  S  P  G  D  C  R  R  G  *  E  W  Q  C  F  S  A  N  V  G  K  R  K  N  F  E  G  C  R  C  F  *  S  Y  T  R  V  R  Q  C  *  R  T  C  I  P  G  E  C  S  I  G  *  *  R  G  S  A  K  A  S  S  W  G  G  R :   K  K  K  E  E  E  K  N  T  I  A  F  E  P :   C  C  C  *  D  A  V  E  S  C  T  R  S  C  C  *  E  L  Y  D  V  H  G  S  A  A  Y </second_frame>
            <third_frame>   A  T  P  D  G  S  Y  A  L  P  S  G  A  S  A  V  L  K  P  N  E :   A  A  F  E  R  E  V  E  G  M  P  S  I  R  S  V  G  D  L  P  Q  E  L  H  C  P  L  C  K  E  V  M  K  D  A  V  L  T  S  K  C  C  F  S  S  Y  C  D  K   : C  I  R  D  H  I  I  S  K  S  V  C  V  C  G  A  T  N  I  L  A  D  D  L  L  P  N  K  T  V  R  D  T  I  N  R  I  L  E  S  N  N  S  S  A  E  H  G  G  S  A  L  Q  V  Q   : D  M  E  S  A  R  I  L  P  P  K  I  P  S  P  S  Q  S  A  A  S  R  G  E  P  L  P  P  P  P  P  P  P  P  V  K  E  E  N  S  K  A  Q  E  I  A  E  E  G  K  N  G  S  A  S  Q  Q  M  L  E  R  G  R  T  L  K  V  A  D  V  S  E  A  T  H  E  S  V  S  V  K  E  P  V  S  P  G  S  A  P  L  A  D  E  E  V  Q  Q  K  P  V  V  G  E  A   : G  K  K  K  K  K  K  K  T  R  L  P  L  N   : P  A  A  A  E  M  Q  W  R  A  A  Q  D  L  A  A  E  N  Y  M  M  S  M  G  L  L  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30997" stop="30936"/>
                    <exon start="30859" stop="30711"/>
                    <exon start="30525" stop="30361"/>
                    <exon start="30255" stop="29941"/>
                    <exon start="29794" stop="29753"/>
                    <exon start="29611" stop="29532"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>813</number_coding_nucleotides>
                  <number_encoded_amino_acids>271</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATPDGSYALPSGASAVLKPNEAAFEREVEGMPSIRSVGDLPQELHCPLCKEVMKDAVLTSKCCFSSYCDKCIRDHIISKSVCVCGATNILADDLLPNKTVRDTINRILESNNSSAEHGGSALQVQDMESARILPPKIPSPSQSAASRGEPLPPPPPPPPVKEENSKAQEIAEEGKNGSASQQMLERGRTLKVADVSEATHESVSVKEPVSPGSAPLADEEVQQKPVVGEAGKKKKKKKTRLPLNPAAAEMQWRAAQDLAAENYMMSMGLLP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="34604" PGL_stop="31779"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34604" e_stop="33730"/>
            <exon e_start="32899" e_stop="32788"/>
            <exon e_start="32292" e_stop="32211"/>
            <exon e_start="32109" e_stop="31943"/>
            <exon e_start="31805" e_stop="31779"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.913" e_score="0.995"/>
          <exon-intron don_prob="0.990" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="34604" e_stop="33730" e_length="875"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.913">
            <gDNA_intron_boundary i_start="33729" i_stop="32900" i_length="830"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="32899" e_stop="32788" e_length="112"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.993">
            <gDNA_intron_boundary i_start="32787" i_stop="32293" i_length="495"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="32292" e_stop="32211" e_length="82"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.985">
            <gDNA_intron_boundary i_start="32210" i_stop="32110" i_length="101"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="32109" e_stop="31943" e_length="167"/>
          </exon>
          <intron i_serial="4" don_prob="0.974" acc_prob="0.999">
            <gDNA_intron_boundary i_start="31942" i_stop="31806" i_length="137"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="31805" e_stop="31779" e_length="27"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34604" stop="33730"/>
              <exon start="32899" stop="32788"/>
              <exon start="32292" stop="32211"/>
              <exon start="32109" stop="31943"/>
              <exon start="31805" stop="31779"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585853" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCCGACAATCAATCAGTTTCTCATCCGTGGAAACCCTAGTTCCGGCACCCCCCATAAAGCTTTACTCTTTTGGCTTTCTTTTCAGTTTTCCGTTCGATCCGCTTCGGAATTCAACGGACTTTTCGGCGAGTTCACCGTGCGCGAAGAGGAATTGACGATTTCCGGTAGAGAAACCTCTCCTGTTATCTGAAGAATTGTCGGTCGACGGGCGGTCGGTTGGTCGTCGCTGATTGGATTCGATTCAATTCAATCGATCTGAAGAATCCGGTGTTCTATAAACCCATAGAAAGCTTCTGAGTTTATCGGATAGAATCATCAACCTCTTCAAGGGTATCCGCTAAGAGAGACGCCCGGCGTGATTAGATAGATCGGATCGAGATCGTCCCCAGTCGAAGGAGTAGCGGTAGCAGTGGTTTGATTTTGGTTATAATAAGCTTGCCTTTAGATATTGCTGCTGACGGAAGCTTGCGGATTATTTTGCTCGTGGAGGATGTTCCTACTGATCTATTGGAGGAATTTGGTTTGACTGATTTTCTTGAGTTATTGAAGAGAAGTTGTGAGCTAGAAAAAAGAGCTTTTAATATTTTTGTACTTTATATCAATTTTCTTTGAGTTCAATATCAGGCCTATTATGATTTTTTGATCGGCCTCGTTGTTGTTATATTGTTTTTGTTTGAGGAAAAAAAGGAATTTTAAGAAAAAAGGAGCTATGTCAGTTTATTTTAAGTTTAAAAGTGCGAAAGATTATGATTCAATTCCAATTGATGGTCACTTTATTACTGTTGGTAATTTGAAAGAAAAAATATTTGAATCCAAGCATCTGGGCAGGGGTACAGATTTCGACCTCGTTGTCACCAACGCCCAGTCTAACGAAG : AATATCTTGATGAGGACACCTTGATTCCCAAAAATACTAGTGTTTTGATTCGTCGCGTTCCTGGACGACCTCGCATGCCCATAGTAACTGCACCTGTAACAGAACCAGACGA : GCCCCAGGTAGAATACCGATCTGAGGAGGCTCAAGCAGTTAGAAGTAATTTTGTGGGAGGGGAGTCATCTGCCACCAAATAT : CCTGAAGATCTTGAATGGGATGAATTTGGAAATGATCTTTACTCTATTCCTGAAACAATATCAGTACAGTCAAGCAACCAAGTGCAGGATGCTCCTCCTCCAAGTAAAGCTGATGAGGAGAGTAAGATCAAAGCTTTAATTGACACTCCAGCCTTAGATTGGCAGAG : TCAACCCTCTGATGGCTTTGGTGCTGG</gDNA_template>
            <first_frame> P  D  N  Q  S  V  S  H  P  W  K  P  *  F  R  H  P  P  *  S  F  T  L  L  A  F  F  S  V  F  R  S  I  R  F  G  I  Q  R  T  F  R  R  V  H  R  A  R  R  G  I  D  D  F  R  *  R  N  L  S  C  Y  L  K  N  C  R  S  T  G  G  R  L  V  V  A  D  W  I  R  F  N  S  I  D  L  K  N  P  V  F  Y  K  P  I  E  S  F  *  V  Y  R  I  E  S  S  T  S  S  R  V  S  A  K  R  D  A  R  R  D  *  I  D  R  I  E  I  V  P  S  R  R  S  S  G  S  S  G  L  I  L  V  I  I  S  L  P  L  D  I  A  A  D  G  S  L  R  I  I  L  L  V  E  D  V  P  T  D  L  L  E  E  F  G  L  T  D  F  L  E  L  L  K  R  S  C  E  L  E  K  R  A  F  N  I  F  V  L  Y  I  N  F  L  *  V  Q  Y  Q  A  Y  Y  D  F  L  I  G  L  V  V  V  I  L  F  L  F  E  E  K  K  E  F  *  E  K  R  S  Y  V  S  L  F  *  V  *  K  C  E  R  L  *  F  N  S  N  *  W  S  L  Y  Y  C  W  *  F  E  R  K  N  I  *  I  Q  A  S  G  Q  G  Y  R  F  R  P  R  C  H  Q  R  P  V  *  R  R :   I  S  *  *  G  H  L  D  S  Q  K  Y  *  C  F  D  S  S  R  S  W  T  T  S  H  A  H  S  N  C  T  C  N  R  T  R  R  :  A  P  G  R  I  P  I  *  G  G  S  S  S  *  K  *  F  C  G  R  G  V  I  C  H  Q  I   : S  *  R  S  *  M  G  *  I  W  K  *  S  L  L  Y  S  *  N  N  I  S  T  V  K  Q  P  S  A  G  C  S  S  S  K  *  S  *  *  G  E  *  D  Q  S  F  N  *  H  S  S  L  R  L  A  E  :  S  T  L  *  W  L  W  C  W </first_frame>
            <second_frame>  P  T  I  N  Q  F  L  I  R  G  N  P  S  S  G  T  P  H  K  A  L  L  F  W  L  S  F  Q  F  S  V  R  S  A  S  E  F  N  G  L  F  G  E  F  T  V  R  E  E  E  L  T  I  S  G  R  E  T  S  P  V  I  *  R  I  V  G  R  R  A  V  G  W  S  S  L  I  G  F  D  S  I  Q  S  I  *  R  I  R  C  S  I  N  P  *  K  A  S  E  F  I  G  *  N  H  Q  P  L  Q  G  Y  P  L  R  E  T  P  G  V  I  R  *  I  G  S  R  S  S  P  V  E  G  V  A  V  A  V  V  *  F  W  L  *  *  A  C  L  *  I  L  L  L  T  E  A  C  G  L  F  C  S  W  R  M  F  L  L  I  Y  W  R  N  L  V  *  L  I  F  L  S  Y  *  R  E  V  V  S  *  K  K  E  L  L  I  F  L  Y  F  I  S  I  F  F  E  F  N  I  R  P  I  M  I  F  *  S  A  S  L  L  L  Y  C  F  C  L  R  K  K  R  N  F  K  K  K  G  A  M  S  V  Y  F  K  F  K  S  A  K  D  Y  D  S  I  P  I  D  G  H  F  I  T  V  G  N  L  K  E  K  I  F  E  S  K  H  L  G  R  G  T  D  F  D  L  V  V  T  N  A  Q  S  N  E   : E  Y  L  D  E  D  T  L  I  P  K  N  T  S  V  L  I  R  R  V  P  G  R  P  R  M  P  I  V  T  A  P  V  T  E  P  D  E :   P  Q  V  E  Y  R  S  E  E  A  Q  A  V  R  S  N  F  V  G  G  E  S  S  A  T  K  Y  :  P  E  D  L  E  W  D  E  F  G  N  D  L  Y  S  I  P  E  T  I  S  V  Q  S  S  N  Q  V  Q  D  A  P  P  P  S  K  A  D  E  E  S  K  I  K  A  L  I  D  T  P  A  L  D  W  Q  S :   Q  P  S  D  G  F  G  A   </second_frame>
            <third_frame>   R  Q  S  I  S  F  S  S  V  E  T  L  V  P  A  P  P  I  K  L  Y  S  F  G  F  L  F  S  F  P  F  D  P  L  R  N  S  T  D  F  S  A  S  S  P  C  A  K  R  N  *  R  F  P  V  E  K  P  L  L  L  S  E  E  L  S  V  D  G  R  S  V  G  R  R  *  L  D  S  I  Q  F  N  R  S  E  E  S  G  V  L  *  T  H  R  K  L  L  S  L  S  D  R  I  I  N  L  F  K  G  I  R  *  E  R  R  P  A  *  L  D  R  S  D  R  D  R  P  Q  S  K  E  *  R  *  Q  W  F  D  F  G  Y  N  K  L  A  F  R  Y  C  C  *  R  K  L  A  D  Y  F  A  R  G  G  C  S  Y  *  S  I  G  G  I  W  F  D  *  F  S  *  V  I  E  E  K  L  *  A  R  K  K  S  F  *  Y  F  C  T  L  Y  Q  F  S  L  S  S  I  S  G  L  L  *  F  F  D  R  P  R  C  C  Y  I  V  F  V  *  G  K  K  G  I  L  R  K  K  E  L  C  Q  F  I  L  S  L  K  V  R  K  I  M  I  Q  F  Q  L  M  V  T  L  L  L  L  V  I  *  K  K  K  Y  L  N  P  S  I  W  A  G  V  Q  I  S  T  S  L  S  P  T  P  S  L  T  K  :  N  I  L  M  R  T  P  *  F  P  K  I  L  V  F  *  F  V  A  F  L  D  D  L  A  C  P  *  *  L  H  L  *  Q  N  Q  T   : S  P  R  *  N  T  D  L  R  R  L  K  Q  L  E  V  I  L  W  E  G  S  H  L  P  P  N  I :   L  K  I  L  N  G  M  N  L  E  M  I  F  T  L  F  L  K  Q  Y  Q  Y  S  Q  A  T  K  C  R  M  L  L  L  Q  V  K  L  M  R  R  V  R  S  K  L  *  L  T  L  Q  P  *  I  G  R   : V  N  P  L  M  A  L  V  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33961" stop="33730"/>
                    <exon start="32899" stop="32788"/>
                    <exon start="32292" stop="32211"/>
                    <exon start="32109" stop="31943"/>
                    <exon start="31805" stop="31781"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>618</number_coding_nucleotides>
                  <number_encoded_amino_acids>206</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SASLLLYCFCLRKKRNFKKKGAMSVYFKFKSAKDYDSIPIDGHFITVGNLKEKIFESKHLGRGTDFDLVVTNAQSNEEYLDEDTLIPKNTSVLIRRVPGRPRMPIVTAPVTEPDEPQVEYRSEEAQAVRSNFVGGESSATKYPEDLEWDEFGNDLYSIPETISVQSSNQVQDAPPPSKADEESKIKALIDTPALDWQSQPSDGFGA</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34241" stop="33993"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IDRIEIVPSRRSSGSSGLILVIISLPLDIAADGSLRIILLVEDVPTDLLEEFGLTDFLELLKRSCELEKRAFNIFVLYINFL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="37043" PGL_stop="48821"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="37043" e_stop="37279"/>
            <exon e_start="37374" e_stop="37476"/>
            <exon e_start="37560" e_stop="37664"/>
            <exon e_start="41370" e_stop="41455"/>
            <exon e_start="44407" e_stop="44648"/>
            <exon e_start="45979" e_stop="46159"/>
            <exon e_start="47595" e_stop="47778"/>
            <exon e_start="48255" e_stop="48821"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.860" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.914" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.583" acc_prob="0.680" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.932" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37043" e_stop="37279" e_length="237"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.998">
            <gDNA_intron_boundary i_start="37280" i_stop="37373" i_length="94"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="37374" e_stop="37476" e_length="103"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="37477" i_stop="37559" i_length="83"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="37560" e_stop="37664" e_length="105"/>
          </exon>
          <intron i_serial="3" don_prob="0.860" acc_prob="0.999">
            <gDNA_intron_boundary i_start="37665" i_stop="41369" i_length="3705"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="41370" e_stop="41455" e_length="86"/>
          </exon>
          <intron i_serial="4" don_prob="0.914" acc_prob="0.968">
            <gDNA_intron_boundary i_start="41456" i_stop="44406" i_length="2951"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="44407" e_stop="44648" e_length="242"/>
          </exon>
          <intron i_serial="5" don_prob="0.959" acc_prob="0.983">
            <gDNA_intron_boundary i_start="44649" i_stop="45978" i_length="1330"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="45979" e_stop="46159" e_length="181"/>
          </exon>
          <intron i_serial="6" don_prob="0.583" acc_prob="0.680">
            <gDNA_intron_boundary i_start="46160" i_stop="47594" i_length="1435"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="47595" e_stop="47778" e_length="184"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.932">
            <gDNA_intron_boundary i_start="47779" i_stop="48254" i_length="476"/>
          </intron>
          <exon e_serial="8" e_score="0.993">
            <gDNA_exon_boundary e_start="48255" e_stop="48821" e_length="567"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37043" stop="37279"/>
              <exon start="37374" stop="37476"/>
              <exon start="37560" stop="37664"/>
              <exon start="41370" stop="41455"/>
              <exon start="44407" stop="44648"/>
              <exon start="45979" stop="46159"/>
              <exon start="47595" stop="47778"/>
              <exon start="48255" stop="48821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U585796" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGATTTATTTCCAGCAAACACACTTGTCATCCTTGAGCCGATCTTGACTTTGGCCGCTATAACTTCTGGTAGCGTCTGCCTCAGCAAACTGTGACACTATATCACGTTTACAGCTCGAAGAGAGAAGCAGAGTACTGTGAAGAAGCGAAAAGGGGGGAGAATTGGGATTTCGGAAGAGCAGAAAATGGGAAACTCTCAGTCGAATTCAACGAATCCACGTTTTGATTTAGCCAAGAG : AGCTTTCACAGAGAGGAAATTGGAAGACTTGAAATCGTTGTTCGATTCACTAGCTGCACAATCACAGAGCAATGGAAAATACGTTTCTTCTTCTGTTTTCAAG : GCATATATTGGAGTTGAAGGGCCATTGGGTGATAGAATGTTCGATTTGGTCACCCAGAAGCGTAAGGATCAAAAGCTTACATATGAGGACCTTGTGATTGCTAAA : GGAACCTATGAAAAAGGGACAAATGCTGATATTGAAGAGTTTATCTATCAGTTGTTAGATGTCTTTGATGATGGCGTTGTTGGAAG : ATCAGATCTGGAAGCAGTCTTGACTGCAGTACTAAGAAATATATCTTCTCATGAGAGCCATCAATCTGAACCTAGTCCGGACAGGGAAATTCTCGACATTTTCCTCAATGCTGCAAATTTGACAACGGATGATACAAAATGCGCTGAAAGTTGTATGTCTTTTGAGGAATTTAAAAGTTGGTGTGCCCGTCTTCCATCAGTAAGGAAGTTTCTCGGAACTCTGTTGTCTACACGTGATTCAG : GCTCTGAGGTTCCTATGCTAGTATACCCAGAGAACATTGATCCTGCTGTAATATTGTTAAGAAAGGAATATGCTTGGCATATAGGTGGGGCCCTCCCACAAGACGAGCTGCATGAATGGAGACTTTTGTATCACAGTACAGTACATGGCCTAAGTTTCAGTACTTTCCTGGGGAACATTTC : AAATGACAAAGGACCAACTTTATTGGTAATTAAAGACAAAGAAGGCTATATTTACGGAGGTTATGCATCTCAGCCATGGGAGAAGCATGCTGACTTTTATGGGGATATGAAGTCTTTCCTCTTCCAGCTATACCCAAAGGCATCGGTTTACCGTCCTACTGGAGCGAACTCTAATTTACAGTGG : TGTGCTATACATTTTAGTTCTGAGAGCATCCCCAATGGCATTGGTTTTGGAGGACGAGCACACCACTTCGGCTTGTTCATCTCAGCTAACTTTGACCTGGGGCATACTTTCACCTGCACGACCTTTGGCAGTCCTAGCTTGTCAAAGACCCACCAAATCTATCCAGAAGTGATAGAATGCTGGGGAGTTGCGATAAAAAGAGCTCAAGATAATCAGGATAGACTTCAAGGTACCGTGTTAGAAAGATTTAAAGAGGATCGCCATATGCTTAACATGGTTGGACTTGCAAATTCAAGTGAGTGATGTGCCCTCTGTACTTTCTTCTTGTGCTGAATTAGCACAGTTTCTAGAGTTTATTGTCTTGCGTGTAGTTTAATAATGTGTTGTGTTACTACAATATAAGTGAGTGCAAAATCACTAGATGCTCAACCCCGTGTATGCGTCGATAGCATCTAGAGTGTAATTTAAGGTTTTGCAATCATTACTATCCCTGGAGTCTTGGCAAATTTCTTCATGCCATTCTCCTAATCATTGTTAATAGTAATTGTCATTTTGATGTATTGTTAG</gDNA_template>
            <first_frame> *  F  I  S  S  K  H  T  C  H  P  *  A  D  L  D  F  G  R  Y  N  F  W  *  R  L  P  Q  Q  T  V  T  L  Y  H  V  Y  S  S  K  R  E  A  E  Y  C  E  E  A  K  R  G  E  N  W  D  F  G  R  A  E  N  G  K  L  S  V  E  F  N  E  S  T  F  *  F  S  Q  E  :  S  F  H  R  E  E  I  G  R  L  E  I  V  V  R  F  T  S  C  T  I  T  E  Q  W  K  I  R  F  F  F  C  F  Q   : G  I  Y  W  S  *  R  A  I  G  *  *  N  V  R  F  G  H  P  E  A  *  G  S  K  A  Y  I  *  G  P  C  D  C  *   : R  N  L  *  K  R  D  K  C  *  Y  *  R  V  Y  L  S  V  V  R  C  L  *  *  W  R  C  W  K  :  I  R  S  G  S  S  L  D  C  S  T  K  K  Y  I  F  S  *  E  P  S  I  *  T  *  S  G  Q  G  N  S  R  H  F  P  Q  C  C  K  F  D  N  G  *  Y  K  M  R  *  K  L  Y  V  F  *  G  I  *  K  L  V  C  P  S  S  I  S  K  E  V  S  R  N  S  V  V  Y  T  *  F  R :   L  *  G  S  Y  A  S  I  P  R  E  H  *  S  C  C  N  I  V  K  K  G  I  C  L  A  Y  R  W  G  P  P  T  R  R  A  A  *  M  E  T  F  V  S  Q  Y  S  T  W  P  K  F  Q  Y  F  P  G  E  H  F  :  K  *  Q  R  T  N  F  I  G  N  *  R  Q  R  R  L  Y  L  R  R  L  C  I  S  A  M  G  E  A  C  *  L  L  W  G  Y  E  V  F  P  L  P  A  I  P  K  G  I  G  L  P  S  Y  W  S  E  L  *  F  T  V   : V  C  Y  T  F  *  F  *  E  H  P  Q  W  H  W  F  W  R  T  S  T  P  L  R  L  V  H  L  S  *  L  *  P  G  A  Y  F  H  L  H  D  L  W  Q  S  *  L  V  K  D  P  P  N  L  S  R  S  D  R  M  L  G  S  C  D  K  K  S  S  R  *  S  G  *  T  S  R  Y  R  V  R  K  I  *  R  G  S  P  Y  A  *  H  G  W  T  C  K  F  K  *  V  M  C  P  L  Y  F  L  L  V  L  N  *  H  S  F  *  S  L  L  S  C  V  *  F  N  N  V  L  C  Y  Y  N  I  S  E  C  K  I  T  R  C  S  T  P  C  M  R  R  *  H  L  E  C  N  L  R  F  C  N  H  Y  Y  P  W  S  L  G  K  F  L  H  A  I  L  L  I  I  V  N  S  N  C  H  F  D  V  L  L  </first_frame>
            <second_frame>  D  L  F  P  A  N  T  L  V  I  L  E  P  I  L  T  L  A  A  I  T  S  G  S  V  C  L  S  K  L  *  H  Y  I  T  F  T  A  R  R  E  K  Q  S  T  V  K  K  R  K  G  G  R  I  G  I  S  E  E  Q  K  M  G  N  S  Q  S  N  S  T  N  P  R  F  D  L  A  K  R :   A  F  T  E  R  K  L  E  D  L  K  S  L  F  D  S  L  A  A  Q  S  Q  S  N  G  K  Y  V  S  S  S  V  F  K  :  A  Y  I  G  V  E  G  P  L  G  D  R  M  F  D  L  V  T  Q  K  R  K  D  Q  K  L  T  Y  E  D  L  V  I  A  K  :  G  T  Y  E  K  G  T  N  A  D  I  E  E  F  I  Y  Q  L  L  D  V  F  D  D  G  V  V  G  R :   S  D  L  E  A  V  L  T  A  V  L  R  N  I  S  S  H  E  S  H  Q  S  E  P  S  P  D  R  E  I  L  D  I  F  L  N  A  A  N  L  T  T  D  D  T  K  C  A  E  S  C  M  S  F  E  E  F  K  S  W  C  A  R  L  P  S  V  R  K  F  L  G  T  L  L  S  T  R  D  S   : G  S  E  V  P  M  L  V  Y  P  E  N  I  D  P  A  V  I  L  L  R  K  E  Y  A  W  H  I  G  G  A  L  P  Q  D  E  L  H  E  W  R  L  L  Y  H  S  T  V  H  G  L  S  F  S  T  F  L  G  N  I  S :   N  D  K  G  P  T  L  L  V  I  K  D  K  E  G  Y  I  Y  G  G  Y  A  S  Q  P  W  E  K  H  A  D  F  Y  G  D  M  K  S  F  L  F  Q  L  Y  P  K  A  S  V  Y  R  P  T  G  A  N  S  N  L  Q  W  :  C  A  I  H  F  S  S  E  S  I  P  N  G  I  G  F  G  G  R  A  H  H  F  G  L  F  I  S  A  N  F  D  L  G  H  T  F  T  C  T  T  F  G  S  P  S  L  S  K  T  H  Q  I  Y  P  E  V  I  E  C  W  G  V  A  I  K  R  A  Q  D  N  Q  D  R  L  Q  G  T  V  L  E  R  F  K  E  D  R  H  M  L  N  M  V  G  L  A  N  S  S  E  *  C  A  L  C  T  F  F  L  C  *  I  S  T  V  S  R  V  Y  C  L  A  C  S  L  I  M  C  C  V  T  T  I  *  V  S  A  K  S  L  D  A  Q  P  R  V  C  V  D  S  I  *  S  V  I  *  G  F  A  I  I  T  I  P  G  V  L  A  N  F  F  M  P  F  S  *  S  L  L  I  V  I  V  I  L  M  Y  C  * </second_frame>
            <third_frame>   I  Y  F  Q  Q  T  H  L  S  S  L  S  R  S  *  L  W  P  L  *  L  L  V  A  S  A  S  A  N  C  D  T  I  S  R  L  Q  L  E  E  R  S  R  V  L  *  R  S  E  K  G  G  E  L  G  F  R  K  S  R  K  W  E  T  L  S  R  I  Q  R  I  H  V  L  I  *  P  R   : E  L  S  Q  R  G  N  W  K  T  *  N  R  C  S  I  H  *  L  H  N  H  R  A  M  E  N  T  F  L  L  L  F  S  R :   H  I  L  E  L  K  G  H  W  V  I  E  C  S  I  W  S  P  R  S  V  R  I  K  S  L  H  M  R  T  L  *  L  L  K :   E  P  M  K  K  G  Q  M  L  I  L  K  S  L  S  I  S  C  *  M  S  L  M  M  A  L  L  E   : D  Q  I  W  K  Q  S  *  L  Q  Y  *  E  I  Y  L  L  M  R  A  I  N  L  N  L  V  R  T  G  K  F  S  T  F  S  S  M  L  Q  I  *  Q  R  M  I  Q  N  A  L  K  V  V  C  L  L  R  N  L  K  V  G  V  P  V  F  H  Q  *  G  S  F  S  E  L  C  C  L  H  V  I  Q  :  A  L  R  F  L  C  *  Y  T  Q  R  T  L  I  L  L  *  Y  C  *  E  R  N  M  L  G  I  *  V  G  P  S  H  K  T  S  C  M  N  G  D  F  C  I  T  V  Q  Y  M  A  *  V  S  V  L  S  W  G  T  F   : Q  M  T  K  D  Q  L  Y  W  *  L  K  T  K  K  A  I  F  T  E  V  M  H  L  S  H  G  R  S  M  L  T  F  M  G  I  *  S  L  S  S  S  S  Y  T  Q  R  H  R  F  T  V  L  L  E  R  T  L  I  Y  S  G :   V  L  Y  I  L  V  L  R  A  S  P  M  A  L  V  L  E  D  E  H  T  T  S  A  C  S  S  Q  L  T  L  T  W  G  I  L  S  P  A  R  P  L  A  V  L  A  C  Q  R  P  T  K  S  I  Q  K  *  *  N  A  G  E  L  R  *  K  E  L  K  I  I  R  I  D  F  K  V  P  C  *  K  D  L  K  R  I  A  I  C  L  T  W  L  D  L  Q  I  Q  V  S  D  V  P  S  V  L  S  S  C  A  E  L  A  Q  F  L  E  F  I  V  L  R  V  V  *  *  C  V  V  L  L  Q  Y  K  *  V  Q  N  H  *  M  L  N  P  V  Y  A  S  I  A  S  R  V  *  F  K  V  L  Q  S  L  L  S  L  E  S  W  Q  I  S  S  C  H  S  P  N  H  C  *  *  *  L  S  F  *  C  I  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37137" stop="37279"/>
                    <exon start="37374" stop="37476"/>
                    <exon start="37560" stop="37664"/>
                    <exon start="41370" stop="41455"/>
                    <exon start="44407" stop="44648"/>
                    <exon start="45979" stop="46159"/>
                    <exon start="47595" stop="47778"/>
                    <exon start="48255" stop="48557"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1344</number_coding_nucleotides>
                  <number_encoded_amino_acids>448</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HYITFTARREKQSTVKKRKGGRIGISEEQKMGNSQSNSTNPRFDLAKRAFTERKLEDLKSLFDSLAAQSQSNGKYVSSSVFKAYIGVEGPLGDRMFDLVTQKRKDQKLTYEDLVIAKGTYEKGTNADIEEFIYQLLDVFDDGVVGRSDLEAVLTAVLRNISSHESHQSEPSPDREILDIFLNAANLTTDDTKCAESCMSFEEFKSWCARLPSVRKFLGTLLSTRDSGSEVPMLVYPENIDPAVILLRKEYAWHIGGALPQDELHEWRLLYHSTVHGLSFSTFLGNISNDKGPTLLVIKDKEGYIYGGYASQPWEKHADFYGDMKSFLFQLYPKASVYRPTGANSNLQWCAIHFSSESIPNGIGFGGRAHHFGLFISANFDLGHTFTCTTFGSPSLSKTHQIYPEVIECWGVAIKRAQDNQDRLQGTVLERFKEDRHMLNMVGLANSSE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="50095" PGL_stop="49543"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="50095" e_stop="49543"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.911"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.911">
            <gDNA_exon_boundary e_start="50095" e_stop="49543" e_length="553"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50095" stop="49543"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590425" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGGTCGTGTCCGTACAAAAACAGTGAAGAAATCTTCACGTCAAGTGATTGAGCGTTACTACTCAAAAATGACTTTAGATTTCCACACAAACAAGAAGATTCTCGAAGAAGTTGCTATCATCCCATCGAAGCGTCTCCGCAACAAGATCGCTGGATTCTCTACTCATCTGATGAAGCGAATCCAAAAAGGTCCGGTTAGAGGCATTTCTCTTAAGCTACAAGAGGAAGAGAGAGAACGCCGTATGGACTTCGTTCCTGATGAATCTGCTATTAATACTGAGAGGATTGAAGTTGATAAGGAAACTATTGACTTGCTTGCTTCAATGGGTATGAGCGAATTACCTGGTGTTGTACTCAAAGAAGAGCAGACGGTGGCTATTGCTGGACCTGTTGGTGGATTTGGCGGTGGTCGTGGTGGGTTCGGCGGCGGACGTGGAGGTCGTGGTGGTTACTGAGATCGGTTTGTTCGTTTTTTTTTTGGTTATGAGAAGTTATTTTTGCTGAATTGTAGACTTGATTTTATCTGATTATTGTTTAAATTTGGGATTTTGTG</gDNA_template>
            <first_frame> W  V  V  S  V  Q  K  Q  *  R  N  L  H  V  K  *  L  S  V  T  T  Q  K  *  L  *  I  S  T  Q  T  R  R  F  S  K  K  L  L  S  S  H  R  S  V  S  A  T  R  S  L  D  S  L  L  I  *  *  S  E  S  K  K  V  R  L  E  A  F  L  L  S  Y  K  R  K  R  E  N  A  V  W  T  S  F  L  M  N  L  L  L  I  L  R  G  L  K  L  I  R  K  L  L  T  C  L  L  Q  W  V  *  A  N  Y  L  V  L  Y  S  K  K  S  R  R  W  L  L  L  D  L  L  V  D  L  A  V  V  V  V  G  S  A  A  D  V  E  V  V  V  V  T  E  I  G  L  F  V  F  F  L  V  M  R  S  Y  F  C  *  I  V  D  L  I  L  S  D  Y  C  L  N  L  G  F  C  </first_frame>
            <second_frame>  G  S  C  P  Y  K  N  S  E  E  I  F  T  S  S  D  *  A  L  L  L  K  N  D  F  R  F  P  H  K  Q  E  D  S  R  R  S  C  Y  H  P  I  E  A  S  P  Q  Q  D  R  W  I  L  Y  S  S  D  E  A  N  P  K  R  S  G  *  R  H  F  S  *  A  T  R  G  R  E  R  T  P  Y  G  L  R  S  *  *  I  C  Y  *  Y  *  E  D  *  S  *  *  G  N  Y  *  L  A  C  F  N  G  Y  E  R  I  T  W  C  C  T  Q  R  R  A  D  G  G  Y  C  W  T  C  W  W  I  W  R  W  S  W  W  V  R  R  R  T  W  R  S  W  W  L  L  R  S  V  C  S  F  F  F  W  L  *  E  V  I  F  A  E  L  *  T  *  F  Y  L  I  I  V  *  I  W  D  F  V </second_frame>
            <third_frame>   G  R  V  R  T  K  T  V  K  K  S  S  R  Q  V  I  E  R  Y  Y  S  K  M  T  L  D  F  H  T  N  K  K  I  L  E  E  V  A  I  I  P  S  K  R  L  R  N  K  I  A  G  F  S  T  H  L  M  K  R  I  Q  K  G  P  V  R  G  I  S  L  K  L  Q  E  E  E  R  E  R  R  M  D  F  V  P  D  E  S  A  I  N  T  E  R  I  E  V  D  K  E  T  I  D  L  L  A  S  M  G  M  S  E  L  P  G  V  V  L  K  E  E  Q  T  V  A  I  A  G  P  V  G  G  F  G  G  G  R  G  G  F  G  G  G  R  G  G  R  G  G  Y  *  D  R  F  V  R  F  F  F  G  Y  E  K  L  F  L  L  N  C  R  L  D  F  I  *  L  L  F  K  F  G  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50093" stop="49641"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>450</number_coding_nucleotides>
                  <number_encoded_amino_acids>150</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GRVRTKTVKKSSRQVIERYYSKMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAINTERIEVDKETIDLLASMGMSELPGVVLKEEQTVAIAGPVGGFGGGRGGFGGGRGGRGGY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="55131" PGL_stop="53136"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="55131" e_stop="55049"/>
            <exon e_start="54497" e_stop="54220"/>
            <exon e_start="53654" e_stop="53136"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="0.964"/>
          <exon-intron don_prob="0.982" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.964">
            <gDNA_exon_boundary e_start="55131" e_stop="55049" e_length="83"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="55048" i_stop="54498" i_length="551"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="54497" e_stop="54220" e_length="278"/>
          </exon>
          <intron i_serial="2" don_prob="0.982" acc_prob="0.999">
            <gDNA_intron_boundary i_start="54219" i_stop="53655" i_length="565"/>
          </intron>
          <exon e_serial="3" e_score="0.992">
            <gDNA_exon_boundary e_start="53654" e_stop="53136" e_length="519"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55131" stop="55049"/>
              <exon start="54497" stop="54220"/>
              <exon start="53654" stop="53136"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U583958" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTTAGAACTTCCTCTCTTATTTCCAAGAAAAATTGTTAAAAATGAATGGCTATTCCTCTCCTATAGCTCACACAAGCAGAAG : ATTAGAAGGGAAAGTAGCTATTGTAACAGGAGGAGCTAGTGGATTTGGAGAAAGTACAGTAAGACTTTTCTTACAAAATGGTGCAAAAGTTGTAATAGCTGATGTTCAAGATGAAATTGGACAATCTCTTTGCAATGATCTCCTCAATTGTCCTAAAAATAAAAACAATGATTTTACATACATACATTGTGATGTAACAAAGGTCTCCGACGTCGAAAACCTTATCGACGCAACAATTTCCAAGTATGGAAAACTCGATATCATGTTCAACAACGCAG : GAATTCCGGGGAATCTCGATTTCAACATAATTGACGCAGATAACGAGAATTTCAAAAAGGTATTTGACGTTAACGTGTACGGATCATTTCTCGGTGCGAAATATGCTGCCCGGGTCATGATCCCAGAAAAGAAAGGTGTCATTCTTTTTACGTCTAGTTTGGCCTCCGTTTCCTCGGGTGAATCACCGCATTCATACACCGCCTCGAAACACGCGGTGGTGGGACTCACGAAGAATTTATGTGCCGAATTAGGGCAACACGGGATAAGAGTGAACTGCGTCTCGCCGTGCGCGGTGGCGACACCGATGTTAGTGAAGGCGATGGGTGTCGATAAGAGCGTCGTGGACGGAATAATTTGCTCGTCGGCGAATTTAAAAGGGGTGGCTCCGACGGCAGAGGATGTGGCGGAGGCGGCGTTGTATTTGGCAAGTGATGAGTCTAAGTTTGTAAGCGGAGTTAACCTAGTGATTGATGGAGGTTATAGTACTACTAATATGAGTTACATAAAAACAATTCAAA</gDNA_template>
            <first_frame> A  *  N  F  L  S  Y  F  Q  E  K  L  L  K  M  N  G  Y  S  S  P  I  A  H  T  S  R  R :   L  E  G  K  V  A  I  V  T  G  G  A  S  G  F  G  E  S  T  V  R  L  F  L  Q  N  G  A  K  V  V  I  A  D  V  Q  D  E  I  G  Q  S  L  C  N  D  L  L  N  C  P  K  N  K  N  N  D  F  T  Y  I  H  C  D  V  T  K  V  S  D  V  E  N  L  I  D  A  T  I  S  K  Y  G  K  L  D  I  M  F  N  N  A   : G  I  P  G  N  L  D  F  N  I  I  D  A  D  N  E  N  F  K  K  V  F  D  V  N  V  Y  G  S  F  L  G  A  K  Y  A  A  R  V  M  I  P  E  K  K  G  V  I  L  F  T  S  S  L  A  S  V  S  S  G  E  S  P  H  S  Y  T  A  S  K  H  A  V  V  G  L  T  K  N  L  C  A  E  L  G  Q  H  G  I  R  V  N  C  V  S  P  C  A  V  A  T  P  M  L  V  K  A  M  G  V  D  K  S  V  V  D  G  I  I  C  S  S  A  N  L  K  G  V  A  P  T  A  E  D  V  A  E  A  A  L  Y  L  A  S  D  E  S  K  F  V  S  G  V  N  L  V  I  D  G  G  Y  S  T  T  N  M  S  Y  I  K  T  I  Q  </first_frame>
            <second_frame>  L  R  T  S  S  L  I  S  K  K  N  C  *  K  *  M  A  I  P  L  L  *  L  T  Q  A  E   : D  *  K  G  K  *  L  L  *  Q  E  E  L  V  D  L  E  K  V  Q  *  D  F  S  Y  K  M  V  Q  K  L  *  *  L  M  F  K  M  K  L  D  N  L  F  A  M  I  S  S  I  V  L  K  I  K  T  M  I  L  H  T  Y  I  V  M  *  Q  R  S  P  T  S  K  T  L  S  T  Q  Q  F  P  S  M  E  N  S  I  S  C  S  T  T  Q  :  E  F  R  G  I  S  I  S  T  *  L  T  Q  I  T  R  I  S  K  R  Y  L  T  L  T  C  T  D  H  F  S  V  R  N  M  L  P  G  S  *  S  Q  K  R  K  V  S  F  F  L  R  L  V  W  P  P  F  P  R  V  N  H  R  I  H  T  P  P  R  N  T  R  W  W  D  S  R  R  I  Y  V  P  N  *  G  N  T  G  *  E  *  T  A  S  R  R  A  R  W  R  H  R  C  *  *  R  R  W  V  S  I  R  A  S  W  T  E  *  F  A  R  R  R  I  *  K  G  W  L  R  R  Q  R  M  W  R  R  R  R  C  I  W  Q  V  M  S  L  S  L  *  A  E  L  T  *  *  L  M  E  V  I  V  L  L  I  *  V  T  *  K  Q  F  K </second_frame>
            <third_frame>   L  E  L  P  L  L  F  P  R  K  I  V  K  N  E  W  L  F  L  S  Y  S  S  H  K  Q  K  :  I  R  R  E  S  S  Y  C  N  R  R  S  *  W  I  W  R  K  Y  S  K  T  F  L  T  K  W  C  K  S  C  N  S  *  C  S  R  *  N  W  T  I  S  L  Q  *  S  P  Q  L  S  *  K  *  K  Q  *  F  Y  I  H  T  L  *  C  N  K  G  L  R  R  R  K  P  Y  R  R  N  N  F  Q  V  W  K  T  R  Y  H  V  Q  Q  R  R :   N  S  G  E  S  R  F  Q  H  N  *  R  R  *  R  E  F  Q  K  G  I  *  R  *  R  V  R  I  I  S  R  C  E  I  C  C  P  G  H  D  P  R  K  E  R  C  H  S  F  Y  V  *  F  G  L  R  F  L  G  *  I  T  A  F  I  H  R  L  E  T  R  G  G  G  T  H  E  E  F  M  C  R  I  R  A  T  R  D  K  S  E  L  R  L  A  V  R  G  G  D  T  D  V  S  E  G  D  G  C  R  *  E  R  R  G  R  N  N  L  L  V  G  E  F  K  R  G  G  S  D  G  R  G  C  G  G  G  G  V  V  F  G  K  *  *  V  *  V  C  K  R  S  *  P  S  D  *  W  R  L  *  Y  Y  *  Y  E  L  H  K  N  N  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55125" stop="55049"/>
                    <exon start="54497" stop="54220"/>
                    <exon start="53654" stop="53137"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>873</number_coding_nucleotides>
                  <number_encoded_amino_acids>291</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NFLSYFQEKLLKMNGYSSPIAHTSRRLEGKVAIVTGGASGFGESTVRLFLQNGAKVVIADVQDEIGQSLCNDLLNCPKNKNNDFTYIHCDVTKVSDVENLIDATISKYGKLDIMFNNAGIPGNLDFNIIDADNENFKKVFDVNVYGSFLGAKYAARVMIPEKKGVILFTSSLASVSSGESPHSYTASKHAVVGLTKNLCAELGQHGIRVNCVSPCAVATPMLVKAMGVDKSVVDGIICSSANLKGVAPTAEDVAEAALYLASDESKFVSGVNLVIDGGYSTTNMSYIKTIQ</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="60400" PGL_stop="60914"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="60400" e_stop="60914"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="60400" e_stop="60914" e_length="515"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60400" stop="60914"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602211" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAACATATCTGTCATTTGTTTGCTTCAATCTAAACCTTCTTAAACTTTTTGTGTTGTAGTAAATGAATACCTCTGCATTGACCGACATATTTGAATCAAAGCATAATTCCTTCAAATTACTAGATCGGGACTTGGTGAAGAGTAGCAAAACAAGCATAATTCATTTCTTGATTGCTCATCCTCCATCTCTCTTCTCAGAATTCTTCTAATAAAGGTACGCTACATTTATACATTTGCTAATCAGAGAAAAAAGCAAGTTCGTAAATTTTTCTTTCTGTTTTATTTTTTGCAGATTTTTATGTTTTTTGTTTCAGATTTAGCTCATTTTCATGGATTTGGGGAGTCCCAAAGCCTGTAGGTCATATTATGCACTTCTGTTTTGTTGCTTCGCAACTAATTTTTTCAATTTATGTCTTAGACAAGTTCATTATAATTCACGAATATCTTCGTACTGTATCTGCTTCAACTAAGACTCATTCTGATTTATATATATATATATATATATATATATATG</gDNA_template>
            <first_frame> T  T  Y  L  S  F  V  C  F  N  L  N  L  L  K  L  F  V  L  *  *  M  N  T  S  A  L  T  D  I  F  E  S  K  H  N  S  F  K  L  L  D  R  D  L  V  K  S  S  K  T  S  I  I  H  F  L  I  A  H  P  P  S  L  F  S  E  F  F  *  *  R  Y  A  T  F  I  H  L  L  I  R  E  K  S  K  F  V  N  F  S  F  C  F  I  F  C  R  F  L  C  F  L  F  Q  I  *  L  I  F  M  D  L  G  S  P  K  A  C  R  S  Y  Y  A  L  L  F  C  C  F  A  T  N  F  F  N  L  C  L  R  Q  V  H  Y  N  S  R  I  S  S  Y  C  I  C  F  N  *  D  S  F  *  F  I  Y  I  Y  I  Y  I  Y  I   </first_frame>
            <second_frame>  Q  H  I  C  H  L  F  A  S  I  *  T  F  L  N  F  L  C  C  S  K  *  I  P  L  H  *  P  T  Y  L  N  Q  S  I  I  P  S  N  Y  *  I  G  T  W  *  R  V  A  K  Q  A  *  F  I  S  *  L  L  I  L  H  L  S  S  Q  N  S  S  N  K  G  T  L  H  L  Y  I  C  *  S  E  K  K  A  S  S  *  I  F  L  S  V  L  F  F  A  D  F  Y  V  F  C  F  R  F  S  S  F  S  W  I  W  G  V  P  K  P  V  G  H  I  M  H  F  C  F  V  A  S  Q  L  I  F  S  I  Y  V  L  D  K  F  I  I  I  H  E  Y  L  R  T  V  S  A  S  T  K  T  H  S  D  L  Y  I  Y  I  Y  I  Y  I  Y  </second_frame>
            <third_frame>   N  I  S  V  I  C  L  L  Q  S  K  P  S  *  T  F  C  V  V  V  N  E  Y  L  C  I  D  R  H  I  *  I  K  A  *  F  L  Q  I  T  R  S  G  L  G  E  E  *  Q  N  K  H  N  S  F  L  D  C  S  S  S  I  S  L  L  R  I  L  L  I  K  V  R  Y  I  Y  T  F  A  N  Q  R  K  K  Q  V  R  K  F  F  F  L  F  Y  F  L  Q  I  F  M  F  F  V  S  D  L  A  H  F  H  G  F  G  E  S  Q  S  L  *  V  I  L  C  T  S  V  L  L  L  R  N  *  F  F  Q  F  M  S  *  T  S  S  L  *  F  T  N  I  F  V  L  Y  L  L  Q  L  R  L  I  L  I  Y  I  Y  I  Y  I  Y  I  Y  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60665" stop="60913"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFLSVLFFADFYVFCFRFSSFSWIWGVPKPVGHIMHFCFVASQLIFSIYVLDKFIIIHEYLRTVSASTKTHSDLYIYIYIYIY</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60546" stop="60758"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QNKHNSFLDCSSSISLLRILLIKVRYIYTFANQRKKQVRKFFFLFYFLQIFMFFVSDLAHFHGFGESQSL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="75441" PGL_stop="73445"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75441" e_stop="75407"/>
            <exon e_start="74094" e_stop="73445"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.810" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="75441" e_stop="75407" e_length="35"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.810">
            <gDNA_intron_boundary i_start="75406" i_stop="74095" i_length="1312"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="74094" e_stop="73445" e_length="650"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75441" stop="75407"/>
              <exon start="74094" stop="73445"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U604841" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTGCGAACTCCGTCTGCCGGCGACGAAAATCAGTT : TTATGGATCGACAAGCTCCTGATTATGCAGCTGCCATGGCGTTTGCTCAACAGCAGCACCAAGCAGCTAACACACAACAGCAACAACAGTTTGGTTTTCATCCCCAACATCAACAATTTCCTCCTTCAATTCATGGTCCTCCATTTCCAGGCCCACATTCTTCTCTTCAACAGTTCCCTTACCCTCGCCCTATGCAGCAACCACAACTCCATCCGCATACACCCCCTCCACATCTTCTTCATCTTCAGCAGCAACAACAACCACCTCCTGCTTTTCCACCACACATGCCTCCTCATCTTGTTCCATCACTTTTTTTCAATCCGTATGATTCTCCCCCACCTCCTTCTCCTCCACCATCTGATCCTGAACTCCAAAAGCGTATTGATAAATTAATTGAATATGCTGTCAAGAATGGTCCTGAGTTTGAAGCCATGATCCGTGAAAAGCAGCAAGACAATCCTGCTTACAGTTTCCTCTTTGGTGGTGAAGGTCATTATTACTATCGCTATAAGCTTTGGATGTCTACTCGCCCCCCTGGTGGGGCCTTCAATCCTCCTTTCCCATCCTCTTCATTGCCTATGATGCATCCACCAAATCCTATGATGAGTCCTTCACCCTTAACTCCATATAATGCCTCCAATGCTTCTGCT</gDNA_template>
            <first_frame> L  R  T  P  S  A  G  D  E  N  Q  F :   Y  G  S  T  S  S  *  L  C  S  C  H  G  V  C  S  T  A  A  P  S  S  *  H  T  T  A  T  T  V  W  F  S  S  P  T  S  T  I  S  S  F  N  S  W  S  S  I  S  R  P  T  F  F  S  S  T  V  P  L  P  S  P  Y  A  A  T  T  T  P  S  A  Y  T  P  S  T  S  S  S  S  S  A  A  T  T  T  T  S  C  F  S  T  T  H  A  S  S  S  C  S  I  T  F  F  Q  S  V  *  F  S  P  T  S  F  S  S  T  I  *  S  *  T  P  K  A  Y  *  *  I  N  *  I  C  C  Q  E  W  S  *  V  *  S  H  D  P  *  K  A  A  R  Q  S  C  L  Q  F  P  L  W  W  *  R  S  L  L  L  S  L  *  A  L  D  V  Y  S  P  P  W  W  G  L  Q  S  S  F  P  I  L  F  I  A  Y  D  A  S  T  K  S  Y  D  E  S  F  T  L  N  S  I  *  C  L  Q  C  F  C  </first_frame>
            <second_frame>  C  E  L  R  L  P  A  T  K  I  S   : F  M  D  R  Q  A  P  D  Y  A  A  A  M  A  F  A  Q  Q  Q  H  Q  A  A  N  T  Q  Q  Q  Q  Q  F  G  F  H  P  Q  H  Q  Q  F  P  P  S  I  H  G  P  P  F  P  G  P  H  S  S  L  Q  Q  F  P  Y  P  R  P  M  Q  Q  P  Q  L  H  P  H  T  P  P  P  H  L  L  H  L  Q  Q  Q  Q  Q  P  P  P  A  F  P  P  H  M  P  P  H  L  V  P  S  L  F  F  N  P  Y  D  S  P  P  P  P  S  P  P  P  S  D  P  E  L  Q  K  R  I  D  K  L  I  E  Y  A  V  K  N  G  P  E  F  E  A  M  I  R  E  K  Q  Q  D  N  P  A  Y  S  F  L  F  G  G  E  G  H  Y  Y  Y  R  Y  K  L  W  M  S  T  R  P  P  G  G  A  F  N  P  P  F  P  S  S  S  L  P  M  M  H  P  P  N  P  M  M  S  P  S  P  L  T  P  Y  N  A  S  N  A  S  A </second_frame>
            <third_frame>   A  N  S  V  C  R  R  R  K  S  V  :  L  W  I  D  K  L  L  I  M  Q  L  P  W  R  L  L  N  S  S  T  K  Q  L  T  H  N  S  N  N  S  L  V  F  I  P  N  I  N  N  F  L  L  Q  F  M  V  L  H  F  Q  A  H  I  L  L  F  N  S  S  L  T  L  A  L  C  S  N  H  N  S  I  R  I  H  P  L  H  I  F  F  I  F  S  S  N  N  N  H  L  L  L  F  H  H  T  C  L  L  I  L  F  H  H  F  F  S  I  R  M  I  L  P  H  L  L  L  L  H  H  L  I  L  N  S  K  S  V  L  I  N  *  L  N  M  L  S  R  M  V  L  S  L  K  P  *  S  V  K  S  S  K  T  I  L  L  T  V  S  S  L  V  V  K  V  I  I  T  I  A  I  S  F  G  C  L  L  A  P  L  V  G  P  S  I  L  L  S  H  P  L  H  C  L  *  C  I  H  Q  I  L  *  *  V  L  H  P  *  L  H  I  M  P  P  M  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75440" stop="75407"/>
                    <exon start="74094" stop="73445"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>684</number_coding_nucleotides>
                  <number_encoded_amino_acids>228</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CELRLPATKISFMDRQAPDYAAAMAFAQQQHQAANTQQQQQFGFHPQHQQFPPSIHGPPFPGPHSSLQQFPYPRPMQQPQLHPHTPPPHLLHLQQQQQPPPAFPPHMPPHLVPSLFFNPYDSPPPPSPPPSDPELQKRIDKLIEYAVKNGPEFEAMIREKQQDNPAYSFLFGGEGHYYYRYKLWMSTRPPGGAFNPPFPSSSLPMMHPPNPMMSPSPLTPYNASNASA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="75403" e_stop="74321"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="75403" e_stop="74321" e_length="1083"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75403" stop="74321"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U568381" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTTCCTTCTAGTTTTTATTATATGATTCTTCTTACTTGCATATATGATTTATTTTAGCTTATCAATTTGATAAATAGCTCCAAATTTGCTGTGTAATAAAGGGAAAGAGGCATTTTCTTTTGGATTGATTAATGTTGCAATTATAATAAATAAATTGAAACGGAGAAAGGAATAAACAATGCTCCTCCCTGTAAGGAACAATCGTTGAGTGAATTGTATCTTTTTTGTGTTAGTTGAATTAAGCGCCCAAGTGATTTTATTCCAAACGTTCTAAACCTAAGTAATTGAAAAGTAGAATTGGATAGATTTTGTTAAAATTCAAATCAGTGCATTGACACTGACGCTTGGGTTGAGCTTAGCAGCCTATTATGTAAGAAATTCGATTAATGGGAGTGTTGAGTAACAACCAAGTGTGTTTGGTATGACAGGAGTTATTTAAGGGTCAATCCTAGTTGGTACCGCTTTGGATGTTGGAGAAATTGATTGTTAGTAATTGTTGAGGGTATTAGTGTAGTTCGTTAATTTTTTGTGACATATGCAAGCATGCAAGGTCAATAAAGCATTATAATTCGAACAAAAATGAAAGCTCATTGTAAAGGTCAGTGAGATCAGAGATGTTTTTCTTTTTTTAATTTTGAGTGTAGCTTGCTTCTTTCTTTTAACTACAGAAGAATCACGTGTGAAGATGAAAATAAGTACTTAAAATTGTGTGTCTTAAACCTCTGAAACCATATATGCTGGAAATTTTGTAGTTTCTGCAGCTGCGAAGTTTTCCTCATCTTGTCTGCAAATAAGTGAAACATTTGTAATTTCCCATTTTCATAATCTGGTCCTGAACAACAGGAAAAGAAACCTCTTTTTCTGCTTGATAAATGACCAAGTAAGAGTATTTTCCTTCTGGGCGTTTCTCTTATCAGGTTGAACATTGTCAAAACCTTTTTTCTTCCCCCCTGTCTGAAGTTTAGAGTCATATGAGGCAGTATGAAGTGGTTTGAGCTGCTTGTCTTTCTTAGAATGTATTCTTATTTCCGAAAGATAACAAAAATGAAGCATGTAATTTATTATCACTTATGCTAAATCAC</gDNA_template>
            <first_frame> S  S  F  *  F  L  L  Y  D  S  S  Y  L  H  I  *  F  I  L  A  Y  Q  F  D  K  *  L  Q  I  C  C  V  I  K  G  K  R  H  F  L  L  D  *  L  M  L  Q  L  *  *  I  N  *  N  G  E  R  N  K  Q  C  S  S  L  *  G  T  I  V  E  *  I  V  S  F  L  C  *  L  N  *  A  P  K  *  F  Y  S  K  R  S  K  P  K  *  L  K  S  R  I  G  *  I  L  L  K  F  K  S  V  H  *  H  *  R  L  G  *  A  *  Q  P  I  M  *  E  I  R  L  M  G  V  L  S  N  N  Q  V  C  L  V  *  Q  E  L  F  K  G  Q  S  *  L  V  P  L  W  M  L  E  K  L  I  V  S  N  C  *  G  Y  *  C  S  S  L  I  F  C  D  I  C  K  H  A  R  S  I  K  H  Y  N  S  N  K  N  E  S  S  L  *  R  S  V  R  S  E  M  F  F  F  F  *  F  *  V  *  L  A  S  F  F  *  L  Q  K  N  H  V  *  R  *  K  *  V  L  K  I  V  C  L  K  P  L  K  P  Y  M  L  E  I  L  *  F  L  Q  L  R  S  F  P  H  L  V  C  K  *  V  K  H  L  *  F  P  I  F  I  I  W  S  *  T  T  G  K  E  T  S  F  S  A  *  *  M  T  K  *  E  Y  F  P  S  G  R  F  S  Y  Q  V  E  H  C  Q  N  L  F  S  S  P  L  S  E  V  *  S  H  M  R  Q  Y  E  V  V  *  A  A  C  L  S  *  N  V  F  L  F  P  K  D  N  K  N  E  A  C  N  L  L  S  L  M  L  N  H </first_frame>
            <second_frame>  V  P  S  S  F  Y  Y  M  I  L  L  T  C  I  Y  D  L  F  *  L  I  N  L  I  N  S  S  K  F  A  V  *  *  R  E  R  G  I  F  F  W  I  D  *  C  C  N  Y  N  K  *  I  E  T  E  K  G  I  N  N  A  P  P  C  K  E  Q  S  L  S  E  L  Y  L  F  C  V  S  *  I  K  R  P  S  D  F  I  P  N  V  L  N  L  S  N  *  K  V  E  L  D  R  F  C  *  N  S  N  Q  C  I  D  T  D  A  W  V  E  L  S  S  L  L  C  K  K  F  D  *  W  E  C  *  V  T  T  K  C  V  W  Y  D  R  S  Y  L  R  V  N  P  S  W  Y  R  F  G  C  W  R  N  *  L  L  V  I  V  E  G  I  S  V  V  R  *  F  F  V  T  Y  A  S  M  Q  G  Q  *  S  I  I  I  R  T  K  M  K  A  H  C  K  G  Q  *  D  Q  R  C  F  S  F  F  N  F  E  C  S  L  L  L  S  F  N  Y  R  R  I  T  C  E  D  E  N  K  Y  L  K  L  C  V  L  N  L  *  N  H  I  C  W  K  F  C  S  F  C  S  C  E  V  F  L  I  L  S  A  N  K  *  N  I  C  N  F  P  F  S  *  S  G  P  E  Q  Q  E  K  K  P  L  F  L  L  D  K  *  P  S  K  S  I  F  L  L  G  V  S  L  I  R  L  N  I  V  K  T  F  F  L  P  P  C  L  K  F  R  V  I  *  G  S  M  K  W  F  E  L  L  V  F  L  R  M  Y  S  Y  F  R  K  I  T  K  M  K  H  V  I  Y  Y  H  L  C  *  I   </second_frame>
            <third_frame>   F  L  L  V  F  I  I  *  F  F  L  L  A  Y  M  I  Y  F  S  L  S  I  *  *  I  A  P  N  L  L  C  N  K  G  K  E  A  F  S  F  G  L  I  N  V  A  I  I  I  N  K  L  K  R  R  K  E  *  T  M  L  L  P  V  R  N  N  R  *  V  N  C  I  F  F  V  L  V  E  L  S  A  Q  V  I  L  F  Q  T  F  *  T  *  V  I  E  K  *  N  W  I  D  F  V  K  I  Q  I  S  A  L  T  L  T  L  G  L  S  L  A  A  Y  Y  V  R  N  S  I  N  G  S  V  E  *  Q  P  S  V  F  G  M  T  G  V  I  *  G  S  I  L  V  G  T  A  L  D  V  G  E  I  D  C  *  *  L  L  R  V  L  V  *  F  V  N  F  L  *  H  M  Q  A  C  K  V  N  K  A  L  *  F  E  Q  K  *  K  L  I  V  K  V  S  E  I  R  D  V  F  L  F  L  I  L  S  V  A  C  F  F  L  L  T  T  E  E  S  R  V  K  M  K  I  S  T  *  N  C  V  S  *  T  S  E  T  I  Y  A  G  N  F  V  V  S  A  A  A  K  F  S  S  S  C  L  Q  I  S  E  T  F  V  I  S  H  F  H  N  L  V  L  N  N  R  K  R  N  L  F  F  C  L  I  N  D  Q  V  R  V  F  S  F  W  A  F  L  L  S  G  *  T  L  S  K  P  F  F  F  P  P  V  *  S  L  E  S  Y  E  A  V  *  S  G  L  S  C  L  S  F  L  E  C  I  L  I  S  E  R  *  Q  K  *  S  M  *  F  I  I  T  Y  A  K  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0101H16.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74684" stop="74481"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSETIYAGNFVVSAAAKFSSSCLQISETFVISHFHNLVLNNRKRNLFFCLINDQVRVFSFWAFLLSG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="82490" PGL_stop="81619"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82490" e_stop="82254"/>
            <exon e_start="81982" e_stop="81916"/>
            <exon e_start="81839" e_stop="81619"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.941"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.970"/>
          <exon-only e_score="0.842"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.941">
            <gDNA_exon_boundary e_start="82490" e_stop="82254" e_length="237"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="82253" i_stop="81983" i_length="271"/>
          </intron>
          <exon e_serial="2" e_score="0.970">
            <gDNA_exon_boundary e_start="81982" e_stop="81916" e_length="67"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="81915" i_stop="81840" i_length="76"/>
          </intron>
          <exon e_serial="3" e_score="0.842">
            <gDNA_exon_boundary e_start="81839" e_stop="81619" e_length="221"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82490" stop="82254"/>
              <exon start="81982" stop="81916"/>
              <exon start="81839" stop="81619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U593741" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAACCCTAATCTACTTTGTTAATGATGATGCCTTGGTATAAAAGAAGGCTGGATGAACGAAAGTAGTGAGATTAGGGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAAGATAGTATATGAGGATCGGAGTGTCACGTTCCGACACCAGGATAGAATATGGATCGG : GTGTCACGTTCCGACACCAGGATAGAATATGGATCGGGTGCCACGTTCCGGTACCAGGATAGTATAT : TGAGGAGCGAAGTGTCACGTACCGACACGAAAGGAATAAAGATAATGAATCTTGAAAAATGTTAATATACTCAATCTAATGAACCTAATTCCCAAATGAGTATGATGAGGAGGCGTGAGTCCTCATTGATGAGCTTGGTGTTATGACCAAGGGTTATGGTACTTGTAAATGCCGCATGTTGAGTATTGTAGTTGATTTTATGATATTATCTGATATATACT</gDNA_template>
            <first_frame> K  P  *  S  T  L  L  M  M  M  P  W  Y  K  R  R  L  D  E  R  K  *  *  D  *  G  I  G  C  H  V  P  V  P  G  *  Y  M  R  I  G  V  S  R  S  D  T  R  I  E  Y  G  S  G  A  T  F  R  Y  Q  D  S  I  *  G  S  E  C  H  V  P  T  P  G  *  N  M  D  R  :  V  S  R  S  D  T  R  I  E  Y  G  S  G  A  T  F  R  Y  Q  D  S  I   : L  R  S  E  V  S  R  T  D  T  K  G  I  K  I  M  N  L  E  K  C  *  Y  T  Q  S  N  E  P  N  S  Q  M  S  M  M  R  R  R  E  S  S  L  M  S  L  V  L  *  P  R  V  M  V  L  V  N  A  A  C  *  V  L  *  L  I  L  *  Y  Y  L  I  Y  T </first_frame>
            <second_frame>  N  P  N  L  L  C  *  *  *  C  L  G  I  K  E  G  W  M  N  E  S  S  E  I  R  G  S  G  A  T  F  R  Y  Q  D  S  I  *  G  S  E  C  H  V  P  T  P  G  *  N  M  D  R  V  P  R  S  G  T  K  I  V  Y  E  D  R  S  V  T  F  R  H  Q  D  R  I  W  I  G :   C  H  V  P  T  P  G  *  N  M  D  R  V  P  R  S  G  T  R  I  V  Y  :  *  G  A  K  C  H  V  P  T  R  K  E  *  R  *  *  I  L  K  N  V  N  I  L  N  L  M  N  L  I  P  K  *  V  *  *  G  G  V  S  P  H  *  *  A  W  C  Y  D  Q  G  L  W  Y  L  *  M  P  H  V  E  Y  C  S  *  F  Y  D  I  I  *  Y  I   </second_frame>
            <third_frame>   T  L  I  Y  F  V  N  D  D  A  L  V  *  K  K  A  G  *  T  K  V  V  R  L  G  D  R  V  P  R  S  G  T  R  I  V  Y  E  D  R  S  V  T  F  R  H  Q  D  R  I  W  I  G  C  H  V  P  V  P  R  *  Y  M  R  I  G  V  S  R  S  D  T  R  I  E  Y  G  S   : G  V  T  F  R  H  Q  D  R  I  W  I  G  C  H  V  P  V  P  G  *  Y  I :   E  E  R  S  V  T  Y  R  H  E  R  N  K  D  N  E  S  *  K  M  L  I  Y  S  I  *  *  T  *  F  P  N  E  Y  D  E  E  A  *  V  L  I  D  E  L  G  V  M  T  K  G  Y  G  T  C  K  C  R  M  L  S  I  V  V  D  F  M  I  L  S  D  I  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0101H16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 84 chains have been computed
$ 
$ memory statistics:
$ 36328 bytes spliced alignments in total
$ 17 spliced alignments have been stored
$ 2136 bytes was the average size of a spliced alignment
$ 20864 bytes predicted gene locations in total
$ 13 predicted gene locations have been stored
$ 1604 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 102 backtrace matrices have been allocated
$ 
$ date finished: 2009-07-29 04:44:02
-->
