<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 11:06:37"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E288195" ref_strand="+" ref_description="SGN-E288195 [cLES-7-F18]">
      <seq>ttctaaatcaatcattttttgaattttttattcgtagagaaaaagtttcattttattcttcaaaaatgaggagagaaggtcgccaacacggtatggtccgtacttacccaattttaccctctccatggaacccaagacccgagcccaggtacatgaacaagtccaattcaccaccaaccgctgggcttttcgcaaaggtcccaactaagcccagtaaccattccaagttcaccggcaagtgcggtagacccaggtgcaccagctgccatgttcatccagctgcaaaatccaaggacaaaactaagggcacacaaaagttaaagggatgcggcgacgtcgtttcgttggttacttggagagttgtggatgctaggcctgggttcaatttttcagggttttcagctactggaattttggatcatttggatagcgattcttcttattacatggatcatgaaatttactatgatgaagattacggttacggagatcaggaattagtagttgactccgatgggtctccagcgatcggcgttgagattgaagataacgatgaagaaaaaatgagtttctgcgaggtgggatttgtgtgggaagatgttgaaaaagatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="+" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="4383" stop="5596"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4683" g_stop="5296" g_length="614"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="614" r_length="614" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="+" ref_id="SGN-E288195" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E288195" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4683" e_stop="5296"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTAAATCAATCATTTTTTGAATTTTTTATTCGTAGAGAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTGAAGAAGATGAA</genome_strand>
        <mrna_strand>TTCTAAATCAATCATTTTTTGAATTTTTTATTCGTAGAGAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTGAAAAAGATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E295411" ref_strand="+" ref_description="SGN-E295411 [cLET-23-L15]">
      <seq>ttgaattttttattcgtagagaaaaagtttcattttattcttcaaaaatgaggagagaaggtcgccaacacggtatggtccgtacttacccaattttaccctctccatggaacccaagacccgagcccaggtacatgaacaagtccaattcaccaccaaccgctgggcttttcgcaaaggtcccaactaagcccagtaaccattccaagttcaccggcaagtgcggtagacccaggtgcaccagctgccatgttcatccagctgcaaaatccaaggacaaaactaagggcacacaaaagttaaagggatgcggcgacgtcgtttcgttggttacttggagagttgtggatgctaggcctgggttcaatttttcagggttttcagctactggaattttggatcatttggatagcgattcttcttattacatggatcatgaaatttactatgatgaagattacggttacggagatcaggaattagtagttgactccgatgggtctccagcgatcggcgttgagattgaagataacgatgaagaaaaaatgagtttctgcgaggtgggatttgtgtgggaagatgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="+" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="4401" stop="5585"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4701" g_stop="5285" g_length="585"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="585" r_length="585" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="+" ref_id="SGN-E295411" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295411" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4701" e_stop="5285"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAATTTTTTATTCGTAGAGAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTG</genome_strand>
        <mrna_strand>TTGAATTTTTTATTCGTAGAGAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E549207" ref_strand="+" ref_description="SGN-E549207 [TUS-68-E15]">
      <seq>gaaaaagtttcattttattcttcaaaaatgaggagagaaggtcgccaacacggtatggtccgtacttacccaattttaccctctccatggaacccaagacccgagcccaggtacatgaacaagtccaattcaccaccaaccgctgggcttttcgcaaaggtcccaactaagcccagtaaccattccaagttcaccggcaagtgcggtagacccaggtgcaccagctgccatgttcatccagctgcaaaatccaaggacaaaactaagggcacacaaaagttaaagggatgcggcgacgtcgtttcgttggttacttggagagttgtggatgctaggcctgggttcaatttttcagggttttcagctactggaattttggatcatttggatagcgattcttcttattacatggatcatgaaatttactatgatgaagattacggttacggagatcaggaattagtagttgactccgatgggtctccagcgatcggcgttgagattgaagataacgatgaagaaaaaatgagtttctgcgaggtgggatttgtgtgggaagatgttgaagaagatgaagattggtgtgttgtggaaggaatctaattcagttccttccaactgtatttgtgttaacctgttgaacaaaattgttacatttctgtaattgtatttactgtcaaataattgggacatttcgatgaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="+" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="4421" stop="5725"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4721" g_stop="5431" g_length="711"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="709" r_length="709" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="+" ref_id="SGN-E549207" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E549207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4721" e_stop="5431"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTGAAGAAGATGAAGATTGGTGTGTTGTGGAAGGAATCTAATTCAGTTCCTTCCAACTGTATTTGTGTTAACCTGTTGAACAAAAATTGTTACATTTCTGTAATTGTATTTACTGTCAAATAAATTGGAACATTTCGATGACATTGCAT</genome_strand>
        <mrna_strand>GAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTGAAGAAGATGAAGATTGGTGTGTTGTGGAAGGAATCTAATTCAGTTCCTTCCAACTGTATTTGTGTTAACCTGTTGAAC-AAAATTGTTACATTTCTGTAATTGTATTTACTGTCAAAT-AATTGGGACATTTCGATGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E545438" ref_strand="+" ref_description="SGN-E545438 [TUS-68-E15](-)">
      <seq>gaaaaagtttctttttattctcaaaaatgaggagagaaggtcgccaacacggtatggtccgtactacccaaattttaccctctccatggaacccaagacccgagcccaggtacatgaacaagtccaattcaccaccaaccgctgggcttttcgcaaaggtcccaactaagcccagtaaccattccaagttcaccggcaagtgcggtagacccaggtgcaccagctgccatgttcatccagctgcaaaatccaaggacaaaactaagggcacacaaaagttaaagggatgcggcgacgtcgtttcgttggttacttggagagttgtggatgctaggcctgggttcaatttttcagggttttcagctactggaattttggatcatttggatagcgattcttcttattacatggatcatgaaatttactatgatgaagattacggttacggagatcaggaattagtagttgactccgatgggtctccagcgatcggcgttgagattgaagataacgatgaagaaaaaatgagtttctgcgaggtgggatttgtgtgggaagatgttgaagaagatgaagattggtgtgttgtggaaggaatctaattcagttccttccnaactgtatttgtgttaacctgttgaacaanaaattgttacatttctgtaattgtatttactgtcaaataaattggaacatttcgatgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="+" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="4421" stop="5725"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4721" g_stop="5424" g_length="704"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="705" r_length="705" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="+" ref_id="SGN-E545438" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>704</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E545438" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4721" e_stop="5424"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTGAAGAAGATGAAGATTGGTGTGTTGTGGAAGGAATCTAATTCAGTTCCTTCC-AACTGTATTTGTGTTAACCTGTTGAACAA-AAATTGTTACATTTCTGTAATTGTATTTACTGTCAAATAAATTGGAACATTTCGATGAC</genome_strand>
        <mrna_strand>GAAAAAGTTTCTTTTTATTC-TCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTACCCAAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTGAAGAAGATGAAGATTGGTGTGTTGTGGAAGGAATCTAATTCAGTTCCTTCCNAACTGTATTTGTGTTAACCTGTTGAACAANAAATTGTTACATTTCTGTAATTGTATTTACTGTCAAATAAATTGGAACATTTCGATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E308829" ref_strand="+" ref_description="SGN-E308829 [cLEZ-14-L7]">
      <seq>aaaaagtttcattttattcttcaaaaatgaggagagaaggtcgcccacacggtatggtccgtacttacccaattttaccctctacatggaacccaagacccgagcccaggtacatgaacatgtccaattcaccaccaaccgctgggcttttcgcaaaggtcccaactaagcccagtaaccattccaagttaaccggcaagtgcggtagacccaggtgcaccagctgccatgttcatccagctgcaaaatccaaggacaaaactaagggcacacaaaagttaaagggatgcggcgacgtcgttgtcgcggttacttgtagagatgtggatgctatgcctgggttcaatttttcagggtttgcagctactggaattttggatcatttggatggcgattcttcttattacatggatcatgaaatttactatgatgaacattacgggtacggagatcaggaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="+" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="4422" stop="5481"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4722" g_stop="5181" g_length="460"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="460" r_length="460" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="+" ref_id="SGN-E308829" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E308829" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4722" e_stop="5181"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTT-TCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATT</genome_strand>
        <mrna_strand>AAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCCACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTACATGGAACCCAAGACCCGAGCCCAGGTACATGAACATGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTAACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTGTCG-CGGTTACTTGTAGAGATGTGGATGCTATGCCTGGGTTCAATTTTTCAGGGTTTGCAGCTACTGGAATTTTGGATCATTTGGATGGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAACATTACGGGTACGGAGATCAGGAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E430842" ref_strand="+" ref_description="SGN-E430842 [STM-54-M8]">
      <seq>cacaacataatggttctctgaatgttcctccttcttgacaggaaatacaattacagaaatgtaacattttttgttcagcaacaggttaatacaaatacaattggaaggaaccgaattagattccttccacaacacaccaatcttcatcttcttcaacattttcccacacaaatcccacttcacataaactcattttttcttcatcagtctcctcaatctcaacgccgatcgccggacaccaatcggagtcaactaccaattcctgatctccgtaaccttcatcggcggcatcatagtaaatttcatgatccatgtaataagaacaatcgctatccaaatgatccaaaatcccagtagctgaaaatccagataaattcaacccaggcctagcatcaacaactctccaagtaaccaacgaaacgacgtcgccgtatccctttatcttttgtgtgcccttagtcttgtctttggattttccagctggatgaatatggcagctggtgcacctgggtctaccgcacttgccggtgaacttggaatggttactgggcttagttgggacctttgcgaaaagcccagcggttggtggtgaattggacttgttcatgtacctgggctcgggtcttgggttccatggagagggtaaaattgggtaagtacggaccatacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="5701" stop="4472"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5401" g_stop="4772" g_length="630"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="670" r_length="636" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E430842" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>630</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E430842" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5401" e_stop="4772"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGACAGTAAATACAATTACAGAAATGTAACAATTTTTGTT---CAACAGGTTAACACAAATACAGTTGGAAGGAACTGAATTAGATTCCTTCCACAACACACCAATCTTCATCTTCTTCAACATCTTCCCACACAAATCCCACCTCGCAGAAACTCATTTTTTCTTCATCGTTATCTTCAATCTCAACGCCGATCGCTGGAGACCCATCGGAGTCAACTACTAATTCCTGATCTCCGTAACCGTAAT---CTTCATCATAGTAAATTTCATGATCCATGTAATAAGAAGAATCGCTATCCAAATGATCCAAAATTCCAGTAGCTGAAAACCCTGAAAAATTGAACCCAGGCCTAGCATCCACAACTCTCCAAGTAACCAACGAAACGACGTCGCCGCATCCCTTTAACTTTTGTGTGCCCTTAGTTTTGTCCTTGGATTTTGCAGCTGGATGAACATGGCAGCTGGTGCACCTGGGTCTACCGCACTTGCCGGTGAACTTGGAATGGTTACTGGGCTTAGTTGGGACCTTTGCGAAAAGCCCAGCGGTTGGTGGTGAATTGGACTTGTTCATGTACCTGGGCTCGGGTCTTGGGTTCCATGGAGAGGGTAAAATTGGGTAAGTACGGACCATACC</genome_strand>
        <mrna_strand>TTGACAGGAAATACAATTACAGAAATGTAACATTTTTTGTTCAGCAACAGGTTAATACAAATACAATTGGAAGGAACCGAATTAGATTCCTTCCACAACACACCAATCTTCATCTTCTTCAACATTTTCCCACACAAATCCCACTTCACATAAACTCATTTTTTCTTCATCAGTCTCCTCAATCTCAACGCCGATCGCCGGACACCAATCGGAGTCAACTACCAATTCCTGATCTCCGTAACCTTCATCGGCGGCATCATAGTAAATTTCATGATCCATGTAATAAGAACAATCGCTATCCAAATGATCCAAAATCCCAGTAGCTGAAAATCCAGATAAATTCAACCCAGGCCTAGCATCAACAACTCTCCAAGTAACCAACGAAACGACGTCGCCGTATCCCTTTATCTTTTGTGTGCCCTTAGTCTTGTCTTTGGATTTTCCAGCTGGATGAATATGGCAGCTGGTGCACCTGGGTCTACCGCACTTGCCGGTGAACTTGGAATGGTTACTGGGCTTAGTTGGGACCTTTGCGAAAAGCCCAGCGGTTGGTGGTGAATTGGACTTGTTCATGTACCTGGGCTCGGGTCTTGGGTTCCATGGAGAGGGTAAAATTGGGTAAGTACGGACCATACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E314407" ref_strand="-" ref_description="SGN-E314407 [cTOA-21-H17]">
      <seq>agcttcaggaagtataacagcagggcctaaatgggacattttgtcttctgtttccaagtctttcacagcctaccgaaacaaattacaatcaccaactttatccactcctttctcactgagaacagaagaaagagctgcacgaaggaaacagaagcttgaagaaaaattcaatgcgaaggaggaaaagaaggttcaacaacaaacaacattaaaggagaaagcaggaacggaacttaggaaacttggacaaagcttttgcttcaaagctcgtcccctgcctgatttctacaaggaaacagaaacagcaaaagatcatgcaaaaaagatcccagtaacacaagctccattgcccaaacgtggaagaatgccatatcccagctcaaagcaaggcttagtctcgatgaaaaatgactcttgcaagaatccaagaaagaagactagctgaaaaaactcacaaatccatcactccttgcaaagagtagtgtcttattagaatgtgtttcaattgggtatttcttccaagagaatgttttggaggtgtgtctttccttaatatgatttaaggagaagcaactccaaaatcttgtataaaaagctatccagacgtaaaattattttaaccacaatcatttaccttttatattaacgttctcaagtcaatattgtcctcatacattcaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="7964" stop="5526"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7664" g_stop="7614" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7613" i_stop="7221" i_length="393">
            <donor d_prob="0.868" d_score="0.98"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7220" g_stop="7121" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="151" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7120" i_stop="7031" i_length="90">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7030" g_stop="6968" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="214" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6967" i_stop="6480" i_length="488">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.455" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="6479" g_stop="6369" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="325" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="6368" i_stop="6182" i_length="187">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="6181" g_stop="5824" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="683" r_length="358" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E314407" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314407" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="7664" e_stop="7614"/>
          <exon e_start="7220" e_stop="7121"/>
          <exon e_start="7030" e_stop="6968"/>
          <exon e_start="6479" e_stop="6369"/>
          <exon e_start="6181" e_stop="5824"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGTGTAAGTGCCTATTACATGATGACCTTAGATTCTAGCATAATCATTTATACATTTGAATGAATAGTAGTAGAGTGTTTTCGCTTTACGTTTAAAAACTGCTGGTTGAAGGTTCAAGCTAAGTGTAACCAGGCTCTGTCATAACTCAAAATAGGTATCTTTTAGTGGATACAGTTTGAGCACTTTTCCAGGACCAGGAAACCTTTTAAAGAGAATCTGAGAGACAGTTGTTTCTACTTGAATTTAGTTATCTTCCACACACATAAGTATGTTGGTGTGTGATGTGTCAAACTATCATGAACCAGGACAGTGATAATCTTCTTTCTGCAAGTATTTGATTATAGAGTATATAATTGCCTCATTGGATATCGCTTACCTTTGTTGTTCCTTGTTCAGTTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAGGCAAGTGTATACATTAAATACTATGGACAATCTTCTTTTCATTATAAAAACTATTTCCACTCATACTTGTACTCCTGCAAATACTTACAGAAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAGGTTCATTTCCTAATGCAAAACTTCCTTTATGGCTTGTCGAATGTTTTCTCTTTACCATGAATTCTGCACCACCTACTTTGAAAAGAAGGAAAACAAAGAAAAGTAGTGTGTGAACTTTGAGGTTTTCCACTCTGAACATTAGAGTAGAAACAGTACATAGCAATAGGTGCTTTTGCTCTTTCCACTAGTAATCAATTCTTCTTTTCGTCCATAAATTTGATTTTCATATGATTTCTTCTAATCACAAGGTAGCAGCTCTTCTTTATCATTTATAACGATCTAAAAGTTTCCAACATTGTAGTATTATGTGATATTTCCCGAAAAATATATGCAAATGATTTGCACTATCATTAGTAATATTTTCCTCATATGGTTTTCACTATCTTTTGTATTCTTGGGCCTCTAGAGTAGTTTTCCTCTACCATAATTTCTAATTTTCGAGTTACGTCTTAAATTGCAAATTCATAACGACAAGCTCTTGCTTGCAGGAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAGGTACACCACTACATCGTATTATATTTTCATGATTCAGATATTCCTAAAAACTACTTTTGTCAAAATGCCATAGTGGCTTGTTCAATGTTGATCACACAGTCCTACTACTATATTTTCTAAATATATGTGTGCCTATCTATCCTCTCCCTTCTCCGGCAGTGGTTCATATGGGTTTAATTTGGTGCAGATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCCAGACGTAAAATTATTTTAACCACAATCATTTACCTTTTATATTAACGTTCTCAAGTCAATATTGTCCTCATACATTCAAATT</genome_strand>
        <mrna_strand>AGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGGACATTTTGTCTTCTGT.........................................................................................................................................................................................................................................................................................................................................................................................................TTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAG..........................................................................................AAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAG...........................................................................................................................................................................................ATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCCAGACGTAAAATTATTTTAACCACAATCATTTACCTTTTATATTAACGTTCTCAAGTCAATATTGTCCTCATACATTCAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E370672" ref_strand="+" ref_description="SGN-E370672 [TUS-27-O12](-)">
      <seq>aacatcaaatggtgcatcaaaccatcccatgacaacgccatcttcagaaagcagaagttccaagtctttcacagcctaccgaaacaaattacaatcaccaactttatccactcctttctcactgagaacagaagaaagagctgcacgaaggaaacagaagcttgaagaaaaattcaatgcgaaggaggaaaagaaggttcaacaacaaacaacattaaaggagaaagcaggaacggaacttaggaaacttggacaaagcttttgcttcaaagctcgtcccctgcctgatttctacaaggaaacagaaacagcaaaagatcatgcaaaaaagatcccagtaacacaagctccattgcccaaacgtggaagaatgccatatcccagctcaaagcaaggcttagtctcgatgaaaaatgactcttgcaagaatccaagaaagaagactagctgaaaaaactcacaaatccatcactccttgcaaagagtagtgtcttattagaatgtgtttcaattgggtatttcttccaagagaatgttttggaggtgtgtctttccttaatatgatttaaggagaagcaactccaaaatcttgtataaaaagctatccagacgtaaaattattttaaccacaatcatttaccttttatattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="8168" stop="5561"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7868" g_stop="7812" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7811" i_stop="7221" i_length="591">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7220" g_stop="7121" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="157" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7120" i_stop="7031" i_length="90">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7030" g_stop="6968" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="220" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6967" i_stop="6480" i_length="488">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.455" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="6479" g_stop="6369" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="331" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="6368" i_stop="6182" i_length="187">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="6181" g_stop="5860" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="653" r_length="322" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E370672" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E370672" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7868" e_stop="7812"/>
          <exon e_start="7220" e_stop="7121"/>
          <exon e_start="7030" e_stop="6968"/>
          <exon e_start="6479" e_stop="6369"/>
          <exon e_start="6181" e_stop="5860"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAGGTATATTTCCCTATATTGTCTAATTAGAATTGTTAGCAAGCATTTCATTGATTCCATTAATACATGGTTCTTTGGTTTTTTCCCACCTTCCCCACTCGAATTCTTGTATCTTCGTATTTACAGGATTAAAACACCGATTCATCCCACAGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGTGTAAGTGCCTATTACATGATGACCTTAGATTCTAGCATAATCATTTATACATTTGAATGAATAGTAGTAGAGTGTTTTCGCTTTACGTTTAAAAACTGCTGGTTGAAGGTTCAAGCTAAGTGTAACCAGGCTCTGTCATAACTCAAAATAGGTATCTTTTAGTGGATACAGTTTGAGCACTTTTCCAGGACCAGGAAACCTTTTAAAGAGAATCTGAGAGACAGTTGTTTCTACTTGAATTTAGTTATCTTCCACACACATAAGTATGTTGGTGTGTGATGTGTCAAACTATCATGAACCAGGACAGTGATAATCTTCTTTCTGCAAGTATTTGATTATAGAGTATATAATTGCCTCATTGGATATCGCTTACCTTTGTTGTTCCTTGTTCAGTTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAGGCAAGTGTATACATTAAATACTATGGACAATCTTCTTTTCATTATAAAAACTATTTCCACTCATACTTGTACTCCTGCAAATACTTACAGAAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAGGTTCATTTCCTAATGCAAAACTTCCTTTATGGCTTGTCGAATGTTTTCTCTTTACCATGAATTCTGCACCACCTACTTTGAAAAGAAGGAAAACAAAGAAAAGTAGTGTGTGAACTTTGAGGTTTTCCACTCTGAACATTAGAGTAGAAACAGTACATAGCAATAGGTGCTTTTGCTCTTTCCACTAGTAATCAATTCTTCTTTTCGTCCATAAATTTGATTTTCATATGATTTCTTCTAATCACAAGGTAGCAGCTCTTCTTTATCATTTATAACGATCTAAAAGTTTCCAACATTGTAGTATTATGTGATATTTCCCGAAAAATATATGCAAATGATTTGCACTATCATTAGTAATATTTTCCTCATATGGTTTTCACTATCTTTTGTATTCTTGGGCCTCTAGAGTAGTTTTCCTCTACCATAATTTCTAATTTTCGAGTTACGTCTTAAATTGCAAATTCATAACGACAAGCTCTTGCTTGCAGGAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAGGTACACCACTACATCGTATTATATTTTCATGATTCAGATATTCCTAAAAACTACTTTTGTCAAAATGCCATAGTGGCTTGTTCAATGTTGATCACACAGTCCTACTACTATATTTTCTAAATATATGTGTGCCTATCTATCCTCTCCCTTCTCCGGCAGTGGTTCATATGGGTTTAATTTGGTGCAGATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCCAGACGTAAAATTATTTTAACCACAATCATTTACCTTTTATATTAAC</genome_strand>
        <mrna_strand>AACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAG..........................................................................................AAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAG...........................................................................................................................................................................................ATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCCAGACGTAAAATTATTTTAACCACAATCATTTACCTTTTATATTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E370673" ref_strand="+" ref_description="SGN-E370673 [TUS-27-O12]">
      <seq>acaagatacctcctccacctcccttcctcaagaaggaaagttcaaaggttgctcccgctactagcaaggcatctaagcattgtgcaactccacttaagactcctatggcaacatcaaatggtgcatcaaaccatcccatgacaacgccatcttcagaaagcagaagttccaagtctttcacagcctaccgaaacaaattacaatcaccaactttatccactcctttctcactgagaacagaagaaagagctgcacgaaggaaacagaagcttgaagaaaaattcaatgcgaaggaggaaaagaaggttcaacaacaaacaacattaaaggagaaagcaggaacggaacttaggaaacttggacaaagcttttgcttcaaagctcgtcccctgcctgatttctacaaggaaacagaaacagcaaaagatcatgcaaaaaagatcccagtaacacaagctccattgcccaaacgtggaagaatgccatatcccagctcaaagcaaggcttagtctcgatgaaaaatgactcttgcaagaatccaagaaagaagactagctgaaaaaactcacaaatccatcactccttgcaaagagtagtgtcttattagaatgtgtttcaattgggtatttcttccaagagaatgttttggaggtgtgtctttccttaatatgatttaaggagaagcaactccaaaatcttgtataaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="8366" stop="5614"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8066" g_stop="7960" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7959" i_stop="7871" i_length="89">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7870" g_stop="7812" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="166" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7811" i_stop="7221" i_length="591">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7220" g_stop="7121" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="266" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="7120" i_stop="7031" i_length="90">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7030" g_stop="6968" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="329" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="6967" i_stop="6480" i_length="488">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.455" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="6479" g_stop="6369" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="440" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="6368" i_stop="6182" i_length="187">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="6181" g_stop="5914" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="708" r_length="268" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E370673" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E370673" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8066" e_stop="7960"/>
          <exon e_start="7870" e_stop="7812"/>
          <exon e_start="7220" e_stop="7121"/>
          <exon e_start="7030" e_stop="6968"/>
          <exon e_start="6479" e_stop="6369"/>
          <exon e_start="6181" e_stop="5914"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCGCTACTAGCAAGGCATCTAAGCATTGTGCAACTCCACTTAAGACTCCTATGGTAATTTCCTCCCCTTGTTTAAACTCCTTTGTCAAAATGATAATAGTCTTTCTTGGTTTGCCTAATGTTTGCTTCACTTTCACCTGCAGGCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAGGTATATTTCCCTATATTGTCTAATTAGAATTGTTAGCAAGCATTTCATTGATTCCATTAATACATGGTTCTTTGGTTTTTTCCCACCTTCCCCACTCGAATTCTTGTATCTTCGTATTTACAGGATTAAAACACCGATTCATCCCACAGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGTGTAAGTGCCTATTACATGATGACCTTAGATTCTAGCATAATCATTTATACATTTGAATGAATAGTAGTAGAGTGTTTTCGCTTTACGTTTAAAAACTGCTGGTTGAAGGTTCAAGCTAAGTGTAACCAGGCTCTGTCATAACTCAAAATAGGTATCTTTTAGTGGATACAGTTTGAGCACTTTTCCAGGACCAGGAAACCTTTTAAAGAGAATCTGAGAGACAGTTGTTTCTACTTGAATTTAGTTATCTTCCACACACATAAGTATGTTGGTGTGTGATGTGTCAAACTATCATGAACCAGGACAGTGATAATCTTCTTTCTGCAAGTATTTGATTATAGAGTATATAATTGCCTCATTGGATATCGCTTACCTTTGTTGTTCCTTGTTCAGTTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAGGCAAGTGTATACATTAAATACTATGGACAATCTTCTTTTCATTATAAAAACTATTTCCACTCATACTTGTACTCCTGCAAATACTTACAGAAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAGGTTCATTTCCTAATGCAAAACTTCCTTTATGGCTTGTCGAATGTTTTCTCTTTACCATGAATTCTGCACCACCTACTTTGAAAAGAAGGAAAACAAAGAAAAGTAGTGTGTGAACTTTGAGGTTTTCCACTCTGAACATTAGAGTAGAAACAGTACATAGCAATAGGTGCTTTTGCTCTTTCCACTAGTAATCAATTCTTCTTTTCGTCCATAAATTTGATTTTCATATGATTTCTTCTAATCACAAGGTAGCAGCTCTTCTTTATCATTTATAACGATCTAAAAGTTTCCAACATTGTAGTATTATGTGATATTTCCCGAAAAATATATGCAAATGATTTGCACTATCATTAGTAATATTTTCCTCATATGGTTTTCACTATCTTTTGTATTCTTGGGCCTCTAGAGTAGTTTTCCTCTACCATAATTTCTAATTTTCGAGTTACGTCTTAAATTGCAAATTCATAACGACAAGCTCTTGCTTGCAGGAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAGGTACACCACTACATCGTATTATATTTTCATGATTCAGATATTCCTAAAAACTACTTTTGTCAAAATGCCATAGTGGCTTGTTCAATGTTGATCACACAGTCCTACTACTATATTTTCTAAATATATGTGTGCCTATCTATCCTCTCCCTTCTCCGGCAGTGGTTCATATGGGTTTAATTTGGTGCAGATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAA</genome_strand>
        <mrna_strand>ACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCGCTACTAGCAAGGCATCTAAGCATTGTGCAACTCCACTTAAGACTCCTATG.........................................................................................GCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAG..........................................................................................AAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAG...........................................................................................................................................................................................ATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E205292" ref_strand="+" ref_description="SGN-E205292 [cLEC-25-F16]">
      <seq>acagaagaaagagctgctcgagggaaacagaagcttgaagaaaaattcaatgcgaaggaggaaaagaaggttcaacaacaaacaacattaaaggagaaagcaggaacggaacttatgaaacttggacaaagcttttgcttcaaagctcgtcccctgcctgatttctacaaggaaacagaaacagcaaaagatcatgcaaaaaagatcccagtaacacaagctccattgcccaaacgtggaagaatgccatattccagctcaaagcaaggcttaatctcgatgaaaaatgactcttgcaagaatccaagaaagaagactagctgaaaaaactcacaaattcatcactccttgcaaagagtagtgtcttattagaatgtgtttcaattgggtatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="7450" stop="5691"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7150" g_stop="7121" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7120" i_stop="7031" i_length="90">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7030" g_stop="6968" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="93" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="6967" i_stop="6480" i_length="488">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.455" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="6479" g_stop="6369" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="204" r_length="111" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6368" i_stop="6182" i_length="187">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="6181" g_stop="5991" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="395" r_length="191" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E205292" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205292" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7150" e_stop="7121"/>
          <exon e_start="7030" e_stop="6968"/>
          <exon e_start="6479" e_stop="6369"/>
          <exon e_start="6181" e_stop="5991"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGAAGAAAGAGCTGCACGAAGGAAACAGGCAAGTGTATACATTAAATACTATGGACAATCTTCTTTTCATTATAAAAACTATTTCCACTCATACTTGTACTCCTGCAAATACTTACAGAAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAGGTTCATTTCCTAATGCAAAACTTCCTTTATGGCTTGTCGAATGTTTTCTCTTTACCATGAATTCTGCACCACCTACTTTGAAAAGAAGGAAAACAAAGAAAAGTAGTGTGTGAACTTTGAGGTTTTCCACTCTGAACATTAGAGTAGAAACAGTACATAGCAATAGGTGCTTTTGCTCTTTCCACTAGTAATCAATTCTTCTTTTCGTCCATAAATTTGATTTTCATATGATTTCTTCTAATCACAAGGTAGCAGCTCTTCTTTATCATTTATAACGATCTAAAAGTTTCCAACATTGTAGTATTATGTGATATTTCCCGAAAAATATATGCAAATGATTTGCACTATCATTAGTAATATTTTCCTCATATGGTTTTCACTATCTTTTGTATTCTTGGGCCTCTAGAGTAGTTTTCCTCTACCATAATTTCTAATTTTCGAGTTACGTCTTAAATTGCAAATTCATAACGACAAGCTCTTGCTTGCAGGAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAGGTACACCACTACATCGTATTATATTTTCATGATTCAGATATTCCTAAAAACTACTTTTGTCAAAATGCCATAGTGGCTTGTTCAATGTTGATCACACAGTCCTACTACTATATTTTCTAAATATATGTGTGCCTATCTATCCTCTCCCTTCTCCGGCAGTGGTTCATATGGGTTTAATTTGGTGCAGATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTC</genome_strand>
        <mrna_strand>ACAGAAGAAAGAGCTGCTCGAGGGAAACAG..........................................................................................AAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAGCAGGAACGGAACTTATGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAG...........................................................................................................................................................................................ATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATTCCAGCTCAAAGCAAGGCTTAATCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATTCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E271249" ref_strand="+" ref_description="SGN-E271249 [cLEM-5-M24]">
      <seq>acaagatacctcctccacctcccttcctcaagaaggaaagttcaaaggttgctcccgctactagcaaggcatctaagcattgtgcaactccacttaagactcctatggcaacatcaaatggtgcatcaaaccatcccatgacaacgccatcttcagaaagcagaagttccaagtctttcacagcctaccgaaacaaattacaatcaccaactttatccactcctttctcactgagaacagaagaaagagctgcacgaaggaaacagaagcttgaagaaaaattcaatgcgaaggaggaaaagaaggttcaacaacaaacaacattaaaggagaaagcaggaacggaacttatgaaacttggacaaagcttttgcttcaaagctcgtcccctgcctgatttcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="8366" stop="6106"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8066" g_stop="7960" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7959" i_stop="7871" i_length="89">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7870" g_stop="7812" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="166" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7811" i_stop="7221" i_length="591">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7220" g_stop="7121" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="266" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="7120" i_stop="7031" i_length="90">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7030" g_stop="6968" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="329" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="6967" i_stop="6480" i_length="488">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.455" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="6479" g_stop="6406" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="403" r_length="74" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E271249" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>403</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E271249" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8066" e_stop="7960"/>
          <exon e_start="7870" e_stop="7812"/>
          <exon e_start="7220" e_stop="7121"/>
          <exon e_start="7030" e_stop="6968"/>
          <exon e_start="6479" e_stop="6406"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCGCTACTAGCAAGGCATCTAAGCATTGTGCAACTCCACTTAAGACTCCTATGGTAATTTCCTCCCCTTGTTTAAACTCCTTTGTCAAAATGATAATAGTCTTTCTTGGTTTGCCTAATGTTTGCTTCACTTTCACCTGCAGGCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAGGTATATTTCCCTATATTGTCTAATTAGAATTGTTAGCAAGCATTTCATTGATTCCATTAATACATGGTTCTTTGGTTTTTTCCCACCTTCCCCACTCGAATTCTTGTATCTTCGTATTTACAGGATTAAAACACCGATTCATCCCACAGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGTGTAAGTGCCTATTACATGATGACCTTAGATTCTAGCATAATCATTTATACATTTGAATGAATAGTAGTAGAGTGTTTTCGCTTTACGTTTAAAAACTGCTGGTTGAAGGTTCAAGCTAAGTGTAACCAGGCTCTGTCATAACTCAAAATAGGTATCTTTTAGTGGATACAGTTTGAGCACTTTTCCAGGACCAGGAAACCTTTTAAAGAGAATCTGAGAGACAGTTGTTTCTACTTGAATTTAGTTATCTTCCACACACATAAGTATGTTGGTGTGTGATGTGTCAAACTATCATGAACCAGGACAGTGATAATCTTCTTTCTGCAAGTATTTGATTATAGAGTATATAATTGCCTCATTGGATATCGCTTACCTTTGTTGTTCCTTGTTCAGTTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAGGCAAGTGTATACATTAAATACTATGGACAATCTTCTTTTCATTATAAAAACTATTTCCACTCATACTTGTACTCCTGCAAATACTTACAGAAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAGGTTCATTTCCTAATGCAAAACTTCCTTTATGGCTTGTCGAATGTTTTCTCTTTACCATGAATTCTGCACCACCTACTTTGAAAAGAAGGAAAACAAAGAAAAGTAGTGTGTGAACTTTGAGGTTTTCCACTCTGAACATTAGAGTAGAAACAGTACATAGCAATAGGTGCTTTTGCTCTTTCCACTAGTAATCAATTCTTCTTTTCGTCCATAAATTTGATTTTCATATGATTTCTTCTAATCACAAGGTAGCAGCTCTTCTTTATCATTTATAACGATCTAAAAGTTTCCAACATTGTAGTATTATGTGATATTTCCCGAAAAATATATGCAAATGATTTGCACTATCATTAGTAATATTTTCCTCATATGGTTTTCACTATCTTTTGTATTCTTGGGCCTCTAGAGTAGTTTTCCTCTACCATAATTTCTAATTTTCGAGTTACGTCTTAAATTGCAAATTCATAACGACAAGCTCTTGCTTGCAGGAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTA</genome_strand>
        <mrna_strand>ACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCGCTACTAGCAAGGCATCTAAGCATTGTGCAACTCCACTTAAGACTCCTATG.........................................................................................GCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAG..........................................................................................AAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAGCAGGAACGGAACTTATGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E419775" ref_strand="+" ref_description="SGN-E419775 [STM-30-O7]">
      <seq>ccaatcacaacaaattctaacttggacttgatgaatgaagtgagatcaaccccaaaatctttgaacaagttgatcaactttactcctgccaaagaggcacacaagatacctcctccacctcccttcctcaagaaggaaagttcaaaggttgctcccactactagcaaggcggcatctaagcagtgtgcaactcctcttaagactcctatggcaacatcaaatggtgcatcaaaccgtcccatgacaacgccatcttcagaaagcagaaggattaaaacaccgattcatccctcagcttcaggaagtagaacagcagggcctaaatggaacattttgtcttctgtttccaagtctttcacagcctaccgaaacaaattacaatcaccaactttatccactcctttctctttgaggacagaagaaagagctacacgaaggaaacagaagcttgaagagaaattcaatgccaatgaggaaaagaaagttcaacaacaaaccacattaaaggagaaagcaggaacggaacttangagacttcgacaaagcttttgcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="8466" stop="6132"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8166" g_stop="7960" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="210" r_length="210" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7959" i_stop="7871" i_length="89">
            <donor d_prob="0.997" d_score="0.83"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7870" g_stop="7812" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="269" r_length="59" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7811" i_stop="7689" i_length="123">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.979" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7688" g_stop="7614" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="344" r_length="75" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="7613" i_stop="7221" i_length="393">
            <donor d_prob="0.868" d_score="0.98"/>
            <acceptor a_prob="0.891" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7220" g_stop="7121" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="444" r_length="100" r_score="0.960"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="7120" i_stop="7031" i_length="90">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="7030" g_stop="6968" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="507" r_length="63" r_score="0.921"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="6967" i_stop="6480" i_length="488">
            <donor d_prob="0.978" d_score="0.92"/>
            <acceptor a_prob="0.455" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="6479" g_stop="6432" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="555" r_length="48" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E419775" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E419775" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8166" e_stop="7960"/>
          <exon e_start="7870" e_stop="7812"/>
          <exon e_start="7688" e_stop="7614"/>
          <exon e_start="7220" e_stop="7121"/>
          <exon e_start="7030" e_stop="6968"/>
          <exon e_start="6479" e_stop="6432"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAATCACAACTAATACTAACTTGGACTTGATGAATGAAATGAGATCAACCCCAAAATCTTTGAGCAAGTTGATCAACTTTACTCCTGCCAAAGAGCCACACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCGCTACTAGCAA---GGCATCTAAGCATTGTGCAACTCCACTTAAGACTCCTATGGTAATTTCCTCCCCTTGTTTAAACTCCTTTGTCAAAATGATAATAGTCTTTCTTGGTTTGCCTAATGTTTGCTTCACTTTCACCTGCAGGCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAGGTATATTTCCCTATATTGTCTAATTAGAATTGTTAGCAAGCATTTCATTGATTCCATTAATACATGGTTCTTTGGTTTTTTCCCACCTTCCCCACTCGAATTCTTGTATCTTCGTATTTACAGGATTAAAACACCGATTCATCCCACAGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGTGTAAGTGCCTATTACATGATGACCTTAGATTCTAGCATAATCATTTATACATTTGAATGAATAGTAGTAGAGTGTTTTCGCTTTACGTTTAAAAACTGCTGGTTGAAGGTTCAAGCTAAGTGTAACCAGGCTCTGTCATAACTCAAAATAGGTATCTTTTAGTGGATACAGTTTGAGCACTTTTCCAGGACCAGGAAACCTTTTAAAGAGAATCTGAGAGACAGTTGTTTCTACTTGAATTTAGTTATCTTCCACACACATAAGTATGTTGGTGTGTGATGTGTCAAACTATCATGAACCAGGACAGTGATAATCTTCTTTCTGCAAGTATTTGATTATAGAGTATATAATTGCCTCATTGGATATCGCTTACCTTTGTTGTTCCTTGTTCAGTTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAGGCAAGTGTATACATTAAATACTATGGACAATCTTCTTTTCATTATAAAAACTATTTCCACTCATACTTGTACTCCTGCAAATACTTACAGAAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAGGTTCATTTCCTAATGCAAAACTTCCTTTATGGCTTGTCGAATGTTTTCTCTTTACCATGAATTCTGCACCACCTACTTTGAAAAGAAGGAAAACAAAGAAAAGTAGTGTGTGAACTTTGAGGTTTTCCACTCTGAACATTAGAGTAGAAACAGTACATAGCAATAGGTGCTTTTGCTCTTTCCACTAGTAATCAATTCTTCTTTTCGTCCATAAATTTGATTTTCATATGATTTCTTCTAATCACAAGGTAGCAGCTCTTCTTTATCATTTATAACGATCTAAAAGTTTCCAACATTGTAGTATTATGTGATATTTCCCGAAAAATATATGCAAATGATTTGCACTATCATTAGTAATATTTTCCTCATATGGTTTTCACTATCTTTTGTATTCTTGGGCCTCTAGAGTAGTTTTCCTCTACCATAATTTCTAATTTTCGAGTTACGTCTTAAATTGCAAATTCATAACGACAAGCTCTTGCTTGCAGGAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTC</genome_strand>
        <mrna_strand>CCAATCACAACAAATTCTAACTTGGACTTGATGAATGAAGTGAGATCAACCCCAAAATCTTTGAACAAGTTGATCAACTTTACTCCTGCCAAAGAGGCACACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCACTACTAGCAAGGCGGCATCTAAGCAGTGTGCAACTCCTCTTAAGACTCCTATG.........................................................................................GCAACATCAAATGGTGCATCAAACCGTCCCATGACAACGCCATCTTCAGAAAGCAGAAG...........................................................................................................................GATTAAAACACCGATTCATCCCTCAGCTTCAGGAAGTAGAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGT.........................................................................................................................................................................................................................................................................................................................................................................................................TTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCTTTGAGGACAGAAGAAAGAGCTACACGAAGGAAACAG..........................................................................................AAGCTTGAAGAGAAATTCAATGCCAATGAGGAAAAGAAAGTTCAACAACAAACCACATTAAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAAGCAGGAACGGAACTTANGAGACTTCGACAAAGCTTTTGCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E560409" ref_strand="+" ref_description="SGN-E560409 [20058]">
      <seq>aggcaacatcaaatggtgcatcaaaccgtcccatgacaacgccatcttcagaaagcagaaggtatatttccctatattgtctaattagaactgttggcaagcatttcattgattccattgacacatggttctttagttttcccacctttcctgctccaattcttgtatcttcctatttacaggattaaaacaccgattcatccctcagcttcaggaagtagaacagcagggcctaaatggaacattttgtcttctgtgtaagtgcctattacatgatgaccctagattcaacaagagtagataatcatttgtacatttgaatgaatagtagcagaacgtttttcgctttatgtgtaaaaactgctggttgaaggttcaagctaagtgtaaccaggctttgccataactcaaaataagtatattttagtggatacagtttgagcacttctccaggaccaggagactttttaaagagaatctgagagaaaattgtttctacttgaatttagttatcttcctacacctataagtatattggtgcgtgatgtatcaaactatcatgaaccaggacagtgataatcttctttctgcaagtatttggttatagagtatataattgtgtcattggatatcgcttacctttggtgttccctgttcagttccaagtctttcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="8172" stop="6906"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7872" g_stop="7206" g_length="667"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="674" r_length="674" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E560409" ref_strand="+">
        <total_alignment_score>0.909</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E560409" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7872" e_stop="7206"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAGGTATATTTCCCTATATTGTCTAATTAGAATTGTTAGCAAGCATTTCATTGATTCCATTAATACATGGTTCTTTGGTTTTTTCCCACCTTCCCCACTCGAATTCTTGTATCTTCGTATTTACAGGATTAAAACACCGATTCATCCCACAGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGTGTAAGTGCCTATTACATGATGACCTTAGATT---C--TAG--CATAATCATTTATACATTTGAATGAATAGTAGTAGAGTG-TTTTCGCTTTACGTTTAAAAACTGCTGGTTGAAGGTTCAAGCTAAGTGTAACCAGGCTCTGTCATAACTCAAAATAGGTATCTTTTAGTGGATACAGTTTGAGCACTTTTCCAGGACCAGGAAACCTTTTAAAGAGAATCTGAGAGACAGTTGTTTCTACTTGAATTTAGTTATCTTCC-ACACACATAAGTATGTTGGTGTGTGATGTGTCAAACTATCATGAACCAGGACAGTGATAATCTTCTTTCTGCAAGTATTTGATTATAGAGTATATAATTGCCTCATTGGATATCGCTTACCTTTGTTGTTCCTTGTTCAGTTCCAAGTCTTTCAC</genome_strand>
        <mrna_strand>AGGCAACATCAAATGGTGCATCAAACCGTCCCATGACAACGCCATCTTCAGAAAGCAGAAGGTATATTTCCCTATATTGTCTAATTAGAACTGTTGGCAAGCATTTCATTGATTCCATTGACACATGGTTCTTTAG--TTTTCCCACCTTTCCTGCTCCAATTCTTGTATCTTCCTATTTACAGGATTAAAACACCGATTCATCCCTCAGCTTCAGGAAGTAGAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGTGTAAGTGCCTATTACATGATGACCCTAGATTCAACAAGAGTAGATAATCATTTGTACATTTGAATGAATAGTAGCAGAACGTTTTTCGCTTTATGTGTAAAAACTGCTGGTTGAAGGTTCAAGCTAAGTGTAACCAGGCTTTGCCATAACTCAAAATAAGTATATTTTAGTGGATACAGTTTGAGCACTTCTCCAGGACCAGGAGACTTTTTAAAGAGAATCTGAGAGAAAATTGTTTCTACTTGAATTTAGTTATCTTCCTACACCTATAAGTATATTGGTGCGTGATGTATCAAACTATCATGAACCAGGACAGTGATAATCTTCTTTCTGCAAGTATTTGGTTATAGAGTATATAATTGTGTCATTGGATATCGCTTACCTTTGGTGTTCCCTGTTCAGTTCCAAGTCTTTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E314322" ref_strand="+" ref_description="SGN-E314322 [cTOA-21-B23]">
      <seq>aacaacgtgtatcgctttttttacatttgaatttcaaatttaaatgctgagatccaaaaacagagagacagataagagccataaaaaatcatttttaagtaacggcacaataattattctgttgattttttcaggttccatagcagactgatgatggaagattcagcttgtcttatacatgctttctcttatgcttctgctatacccaatgaaataaaacagggaaaccctgtgcatgcacttggggagtcaatttcttttgggagatttgtgtctgagtctttagattgggaaaaatggtcaactttttctcataaaagatatgtagaggaggctgagaggtatgctaagccaggttctgttgcccaaaaaaaagctttctttgaagcccattacaagaaaattgctgcccaaaaggctgcagctttgcttgaacaagccaatcaacaaaaccccgattctgaaattaccaagaattcagcccctgattctacttcacttgtgaaacctcatgtagaagctaatcaagaagaggttcatgagaaccctgatgctttaacaacagattccatggttaaggcttctgtttcagttgctgatgtggaggagatagagagcgagtccccagtggagggtccaggtactcctgaagctacagagaaagaccatcaaacacattgagaatggtgaaccccagaacagtttctgagatagtgaacatctcatactgagaagctttgctgaagataaagctcagctctaaactgagatgatgctgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="9873" stop="8415"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9573" g_stop="9352" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9351" i_stop="9256" i_length="96">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9255" g_stop="8719" g_length="537"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="752" r_length="530" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E314322" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314322" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9573" e_stop="9352"/>
          <exon e_start="9255" e_stop="8719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAGGTATAAATAAATAAATAAAAAACTGTTTTATTTTTCAAGATTCTTGTGTTTCTTTTTCTTTCTTGCTGATTTTTTGGGATGGAATTGAGTATTCAGGGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAGAACCATCAAACCACATTGAGAATGGTGAAACCCAAGAAACAGTTTCTGAGATTAGTGAAACATCTCATACTGAGAAGCCTTTGCTGAAGACTAAG</genome_strand>
        <mrna_strand>AACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAG................................................................................................GGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAG-ACCATCAAA-CACATTGAGAATGGTG-AACCCCAG-AACAGTTTCTGAGA-TAGTG-AACATCTCATACTGAGAAG-CTTTGCTGAAGATAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E314435" ref_strand="+" ref_description="SGN-E314435 [cTOA-21-L22]">
      <seq>aacaacgtgtatcgctttttttacatttgaatttcaaatttaaatgctgagatccaaaaacagagagacagataagagccataaaaaatcatttttaagtaacggcacaataattattctgttgattttttcaggttccatagcagactgatgatggaagattcagcttgtcttatacatgctttctcttatgcttctgctatacccaatgaaataaaacagggaaaccctgtgcatgcacttggggagtcaatttcttttgggagatttgtgtctgagtctttagattgggaaaaatggtcaactttttctcataaaagatatgtagaggaggctgagaggtatgctaagccaggttctgttgcccaaaaaaaagctttctttgaagcccattacaagaaaattgctgcccaaaaggctgcagctttgcttgaacaagccaatcaacaaaaccccgattctgaaattaccaagaattcagcccctgattctacttcacttgtgaaacctcatgtagaagctaatcaagaagaggttcatgagaaccctgatgctttaacaacagattccatggttaaggcttctgtttcagttgctgatgtggaggagatagagagcgagtccccagtggagggtccaggtactcctgaagctacagagaaagaacatcgaaccacattgagaatggtgaaaccaagaaacagtttctgagattagtgaacatctcatactgagaagcctttgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="9873" stop="8428"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9573" g_stop="9352" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9351" i_stop="9256" i_length="96">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9255" g_stop="8728" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="747" r_length="525" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E314435" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>750</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314435" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9573" e_stop="9352"/>
          <exon e_start="9255" e_stop="8728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAGGTATAAATAAATAAATAAAAAACTGTTTTATTTTTCAAGATTCTTGTGTTTCTTTTTCTTTCTTGCTGATTTTTTGGGATGGAATTGAGTATTCAGGGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAGAACCATCAAACCACATTGAGAATGGTGAAACCCAAGAAACAGTTTCTGAGATTAGTGAAACATCTCATACTGAGAAGCCTTTGCTG</genome_strand>
        <mrna_strand>AACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAG................................................................................................GGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAGAA-CATCGAACCACATTGAGAATGGTGAAA-CCAAGAAACAGTTTCTGAGATTAGTG-AACATCTCATACTGAGAAGCCTTTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E728970" ref_strand="+" ref_description="SGN-E728970 [LA19CC02]">
      <seq>ttttaagtaacggcacaataattattctgttgattttttcaggttccatagcagactgatgatggaagattcagcttgtcttatacatgctttctcttatgcttctgctatacccaatgaaataaaacagggaaaccctgtgcatgcacttggggagtcaatttcttttgggagatttgtgtctgagtctttagattgggaaaaatggtcaactttttctcataaaagatatgtagaggaggctgagaggtatgctaagccaggttctgttgcccaaaaaaaagctttctttgaagcccattacaagaaaattgctgcccaaaaggctgcagctttgcttgaacaagccaatcaacaaaaccccgattctgaaattaccaagaattcagcccctgattctacttcacttgtgaaacctcatgtagaagctaatcaagaagaggttcatgagaaccctgatgctttaacaacagattccatggttaaggcttctgtttcagttgctgatgtggaggagatatagagcgagtccccagtggaggggccaggtactcctgaagctacagagaaagaaccaccaaaccacattgagaatggtgaaacccaagaaacagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="9781" stop="8470"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9481" g_stop="9352" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="130" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9351" i_stop="9256" i_length="96">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9255" g_stop="8770" g_length="486"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="616" r_length="486" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E728970" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E728970" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9481" e_stop="9352"/>
          <exon e_start="9255" e_stop="8770"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAGGTATAAATAAATAAATAAAAAACTGTTTTATTTTTCAAGATTCTTGTGTTTCTTTTTCTTTCTTGCTGATTTTTTGGGATGGAATTGAGTATTCAGGGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAGAACCATCAAACCACATTGAGAATGGTGAAACCCAAGAAACAGTT</genome_strand>
        <mrna_strand>TTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAG................................................................................................GGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATATAGAGCGAGTCCCCAGTGGAGGGGCCAGGTACTCCTGAAGCTACAGAGAAAGAACCACCAAACCACATTGAGAATGGTGAAACCCAAGAAACAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E312915" ref_strand="+" ref_description="SGN-E312915 [cTOA-8-J16]">
      <seq>gatggaagattcatcttgtcttatacatgctttctcttatgcttgtgctatacccaatgaaataaaacagggaaaccctgtgcatgcacttggggagtcaatttcttttgggagatttgtgtctgagtctttagattgggaaaaatggtcaactttttctcataaaagatatgtagaggaggctgagaggtatgctaagccaggttctgttgcccaaaaaaaagctttctttgaagcccattacaagaaaattgctgcccaaaaggctgcagctttgcttgaacaagccaatcaacaaaaccccgattctgaaattaccaagaattcagcccctgattctacttcacttgtgaaacctcatgtagaagctaatcaagaagaggttcatgagaaccctgatgctttaacaacagattccatggttaaggcttctgtttcagttgctgatgtggaggagatagagagcgagtccccagtggagggtccaggtactcctgaagctacagagaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="9721" stop="8514"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9421" g_stop="9352" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9351" i_stop="9256" i_length="96">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9255" g_stop="8814" g_length="442"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="512" r_length="442" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E312915" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E312915" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9421" e_stop="9352"/>
          <exon e_start="9255" e_stop="8814"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAGGTATAAATAAATAAATAAAAAACTGTTTTATTTTTCAAGATTCTTGTGTTTCTTTTTCTTTCTTGCTGATTTTTTGGGATGGAATTGAGTATTCAGGGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAG</genome_strand>
        <mrna_strand>GATGGAAGATTCATCTTGTCTTATACATGCTTTCTCTTATGCTTGTGCTATACCCAATGAAATAAAACAG................................................................................................GGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E313252" ref_strand="+" ref_description="SGN-E313252 [cTOA-18-B15]">
      <seq>aagcacttggcctaaatttaaaaaaatgacacctttagcttcttcttactctatgagtggcctttcttaaacaacgtgtatcgctttttttacatttgaatttcaaatttaaatgctgagatccaaaaacagagagacagataagagccataaaaaatcatttttaagtaacggcacaataattattctgttgattttttcaggttccatagcagactgatgatggaagattcagcttgtcttatacatgctttctcttatgcttctgctatacccaatgaaataaaacagggaaaccctgtgcatgcacttggggagtcaatttcttttgggagatttgtgtctgagtctttagattgggaaaaatggtcaactttttctcataaaagatatgtagaggaggctgagaggtatgctaagccaggttctgttgcccaaaaaaaagctttctttgaagcccattacaagaaaattgctgcccaaaaggctgcagctttgcttgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="9942" stop="8743"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9642" g_stop="9352" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9351" i_stop="9256" i_length="96">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9255" g_stop="9043" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="504" r_length="213" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E313252" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E313252" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9642" e_stop="9352"/>
          <exon e_start="9255" e_stop="9043"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCACTTGGCCTAAATTTAAAAAAATGACACCTTTAGCTTCTTCTTACTCTATGAGTGGCCTTTCTTAAACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAGGTATAAATAAATAAATAAAAAACTGTTTTATTTTTCAAGATTCTTGTGTTTCTTTTTCTTTCTTGCTGATTTTTTGGGATGGAATTGAGTATTCAGGGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAA</genome_strand>
        <mrna_strand>AAGCACTTGGCCTAAATTTAAAAAAATGACACCTTTAGCTTCTTCTTACTCTATGAGTGGCCTTTCTTAAACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAG................................................................................................GGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E313212" ref_strand="+" ref_description="SGN-E313212 [cTOA-18-C1]">
      <seq>aagcacttggcctaaatttaaaaaaatgacacctttagcttcttcttactctatgagtggcctttcttaaacaacgtgtatcgctttttttacatttgaatttcaaatttaaatgctgagatccaaaaacagagagacagataagagccataaaaaatcatttttaagtaacggcacaataattattctgttgattttttcaggttccatagcagactgatgatggaagattcagcttgtcttatacatgctttctcttatgcttctgctatacccaatgaaataaaacagggaaaccctgtgcatgcacttggggagtcaatttcttttgggagatttgtgtctgagtctctagattgggaaaaatggtcaactttttctcataaaagatatgtagaggaggctgagaggtatgctaagccaggttctgttgcccaaaaaaaagctttctttgaagcccattacaagaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="9942" stop="8775"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9642" g_stop="9352" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="291" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9351" i_stop="9256" i_length="96">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9255" g_stop="9075" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="472" r_length="181" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E313212" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E313212" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9642" e_stop="9352"/>
          <exon e_start="9255" e_stop="9075"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCACTTGGCCTAAATTTAAAAAAATGACACCTTTAGCTTCTTCTTACTCTATGAGTGGCCTTTCTTAAACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAGGTATAAATAAATAAATAAAAAACTGTTTTATTTTTCAAGATTCTTGTGTTTCTTTTTCTTTCTTGCTGATTTTTTGGGATGGAATTGAGTATTCAGGGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAA</genome_strand>
        <mrna_strand>AAGCACTTGGCCTAAATTTAAAAAAATGACACCTTTAGCTTCTTCTTACTCTATGAGTGGCCTTTCTTAAACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAG................................................................................................GGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTCTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E318441" ref_strand="+" ref_description="SGN-E318441 [cTOB-10-O10]">
      <seq>aagagccattaaaaatcatttttaagtaacggcacaataattattctgttgattttttcaggttccataacaaactgatgatggaagagtcagcttggcttatacatgctttctcttatgcttctgctgtacccaatgaaataaaacaggggaaccctgtgcatgcacttggggagtcaatttcttttgggagatttgtgtatgagtctttacattgggaaaaaaggtcaactttttcttataaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="9800" stop="8860"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9500" g_stop="9352" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9351" i_stop="9256" i_length="96">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.972" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="9255" g_stop="9160" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="245" r_length="96" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E318441" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>245</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318441" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9500" e_stop="9352"/>
          <exon e_start="9255" e_stop="9160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAGGTATAAATAAATAAATAAAAAACTGTTTTATTTTTCAAGATTCTTGTGTTTCTTTTTCTTTCTTGCTGATTTTTTGGGATGGAATTGAGTATTCAGGGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAA</genome_strand>
        <mrna_strand>AAGAGCCATTAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAACAAACTGATGATGGAAGAGTCAGCTTGGCTTATACATGCTTTCTCTTATGCTTCTGCTGTACCCAATGAAATAAAACAG................................................................................................GGGAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTATGAGTCTTTACATTGGGAAAAAAGGTCAACTTTTTCTTATAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E390477" ref_strand="+" ref_description="SGN-E390477 [TUS-40-G5](-)">
      <seq>atcagggagaggggtttgaagcatatacaccacagtagattttcacgcctcaccagatttgcttttcaacctcctaaatttgtggaggtggagtttgaaaacggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgcggtgagaaggtcatatctggtaggcgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattatttgatgacttgcataagactggaatctttacatgggactacttctaccatcttggaagtaacaaatttgccctcatgagaaattacatcagaactttgaagaaacatggactaagccgcgatccacctagacgaagatgaccttaagacgtgcccatgagaaggctgatccacactatttaagctggaaacatcctccttatatatgctcagagtgaaattgtgacataaaactgtactgttgcaaatattctaaagactagctcttgatatgttatcatatgttcagggatatttgtggtgtgctattttctagatctagagattgacatgtgatacaaaagaggtcattagtttttaaggaacattaaggaaccttttcgtttgtaatttagatttgggaagcatgttggtgttgcagaacaacatgcttgattgaatgaaaggaacagtaaacgttgaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="13913" stop="10926"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13613" g_stop="13533" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="0.914"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13532" i_stop="12116" i_length="1417">
            <donor d_prob="0.970" d_score="0.94"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12115" g_stop="12008" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="189" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12007" i_stop="11848" i_length="160">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11847" g_stop="11783" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="254" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11782" i_stop="11697" i_length="86">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11696" g_stop="11226" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="725" r_length="471" r_score="0.994"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="11225" i_stop="11163" i_length="63">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="11162" g_stop="11156" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="726" r_stop="732" r_length="7" r_score="0.857"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E390477" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E390477" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13613" e_stop="13533"/>
          <exon e_start="12115" e_stop="12008"/>
          <exon e_start="11847" e_stop="11783"/>
          <exon e_start="11696" e_stop="11226"/>
          <exon e_start="11162" e_stop="11156"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCA-GGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTTGTAAGTCTGTCTAATGGATTGTTTGGCTTGAAAACTTAATTTCTAGGTTTTCGTATTTTTGCCTATAATGTTCTGGATTCCTGAGTTTATGTTTGTTTATCTTGCAATTATTCAGTACACAGGTCACAGATAACAGTGTTTAGAAGGTCTTTATGAAATTGTTATGGGGAACTGCAATTGGTATTAGCTGTTAACAGAACAATCCAATGAATATTTTACTGACCCGTTTCAAAATGTTTATGCAAGTGAATGGTGTTAGATTATTTTTAACTTGCTTTTAGTTTACACTTGTTGCGATAAATTTACATGTGAATAACTGAATTATTGCTTTCAATCATTCTGGTTCATGTTCAGTTGAGCAACTTCCTCTTCAATACTACATGTGTTATTTACTTTGTAGGGTTGATGGAAATTTATTTACTTAAATATTCCATTGTAAACATGTTAGGACCGGAAATAAGCAGGTGTAAATGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAGAAGACAACGAGAAATATACCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTACGTCCACAAAGGAAATGAGCAATCCACTATAAATATGAGAGTATAAAATACAGAGAGAAACAACCTCAACCAATTCACTCAGAATTCATGAGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCCATAAATTCTCCCCCTAACCAAAACTCTCAAAGCCCTTAAGACTACATTGTGAATGCTGATTAAGTTAGAAGGAACATTCCTCTATTTATAGAGTCCTAAACCTTTTCCTACAAGAAAAGGATTAGTCAATCCAAAACTTTTTTCTAAAAGGAAAACCTATTCATGGTAAGAAATTTAGGGCAAATAAAACCCAACAAAACATTCATCTTTTAGGCTTGTCTGGGAAAATACTCCAAGCTAGACACTTTGATTGTTTTCTTTATTTTGAATTTATTGAGTTGCTTTTATTCTATTTGGGGAGGAACTATTGAGTTGGTTTTGCTGCACCATCATTGATACATAAGATTGTGTTTGAGTCACCAAGTGCATGCCCTCCTTGTTCTAGGGAACTATAGAACCTGTGCTCCTTTCAGTGATATGTCAATAATGATGTGCACATAGTAGCATTATAAGCTTCAGTTTGACGATTGGACGGGAAAAAGGTTTTAAATAGCCCACATATAGTTGGAGAAAGGTGATGTTAGAGTGCTGCCTTTCCAAAAAAATTTAAATCATGAATCTAGTTATAGTCACGTCCCTTTGATGGATTTTGGAGACTGGTTTCATGTATCTCTTGTTTCATCAATCTGGATTCTGCAAAGTGCAAACTTGTTTCTTATAGGCTTCCATTACTCTAAGTTGGACCTGTCTTATCACTTGGTGAATCTTTTCAGGTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAAGTTTGTTTTTTCTTTTCTTTTTTAGTTTTGTCATCTTAGAATGTCTTCTTTAATCTGTATCAGAAAAAAG</genome_strand>
        <mrna_strand>ATCAGGGAGAGGGGTTTGAAGCATATACACCACAGTAGATT-TTCACGCCTCACCAGATTTGCTTTTCAACCTCCTAAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTTTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTTTAAGGAACATTAAGGAACCTTTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAA...............................................................AAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E390373" ref_strand="+" ref_description="SGN-E390373 [TUS-41-G5](-)">
      <seq>agtttgaaaacggtagtctgtataagttgtcagctgtgttatttgagaatatacagccccgctgttgatagtaagatcagattgatttgcggtgagaaggtcatatttggtaggcgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattatttgatgacttgcataagactggaatctttacatgggactacttctaccatcttggaagtaacaaatttgccctcatgagaaattacatcagaactttgaagaaacatggactaagccgcgatccacctagacgaagatgaccttaagacgtgcccatgagaaggctgatccacactatttaagctggaaacatcctccttatatatgctcagagtgaaattgtgacataaaactgtactgttgcaaatattctaaagactagctcttgatatgttatcatatgttcagggatatttgtggtgtgctattttttagatctagagattgacatgtgatacaaaagaggtcattagtttttaaggaacattaaggaacctcttcgtttgtaatttagatttgggaagcatgttggtgttgcagaacaacatgcttgattgaatgaaaggaacagtaaacgtagaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="12405" stop="10926"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12105" g_stop="12008" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12007" i_stop="11848" i_length="160">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11847" g_stop="11783" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="164" r_length="65" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11782" i_stop="11697" i_length="86">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11696" g_stop="11226" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="635" r_length="471" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11225" i_stop="11163" i_length="63">
            <donor d_prob="0.951" d_score="0.98"/>
            <acceptor a_prob="0.962" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11162" g_stop="11156" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="636" r_stop="642" r_length="7" r_score="0.857"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E390373" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>641</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E390373" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12105" e_stop="12008"/>
          <exon e_start="11847" e_stop="11783"/>
          <exon e_start="11696" e_stop="11226"/>
          <exon e_start="11162" e_stop="11156"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAG-TATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAAGTTTGTTTTTTCTTTTCTTTTTTAGTTTTGTCATCTTAGAATGTCTTCTTTAATCTGTATCAGAAAAAAG</genome_strand>
        <mrna_strand>AGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGTGTTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATTGATTTGCGGTGAGAAG................................................................................................................................................................GTCATATTTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTTTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTTTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTTTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTAGAAA...............................................................AAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E717689" ref_strand="+" ref_description="SGN-E717689 [FC02BH01]">
      <seq>gagggagattcgacttccggaaaatgaatgtgatcaggagaggtgttcgaagcatatacaccacagtagattctccacgcctcaccagatttgctcttcaacctcctaaatttgtggaggtggagtttgaaaacggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgcggtgagaaggtcatatctggtaggcgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattatttgatgacttgcataagactggaatctttacatgggactacttctaccatcttggaagtaacaaatttgccctcatgagaaattacatcagaactctgaagaaacatggactaagccgcgatccacctagacgaagatgaccttaagacgtgcccatgagaaggctgatccacactatttaagctggaaacatcctccttatatatgctcagagtgaaattgtgacataaaactgtactgttgcaaatattctaaagactagctcttgatatgttatcatatgttcagggatatttgtggtgtgctattttctagatctagagattgacatgtgatacaaaagaggtcattagtttctaaggaacattaaggaacctcttcgtttgtaatttagatttgggaagcatgttggtgttgcagaacaacatgcttgattgaatgaaaggaacagtaaacgttgaaagtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="13944" stop="10923"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13645" g_stop="13533" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="113" r_length="113" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13532" i_stop="12116" i_length="1417">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12115" g_stop="12008" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="221" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12007" i_stop="11848" i_length="160">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11847" g_stop="11783" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="286" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11782" i_stop="11697" i_length="86">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11696" g_stop="11222" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="761" r_length="475" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E717689" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>761</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E717689" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13645" e_stop="13533"/>
          <exon e_start="12115" e_stop="12008"/>
          <exon e_start="11847" e_stop="11783"/>
          <exon e_start="11696" e_stop="11222"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGGAGATTCGACTTACGGAAAATGAATGTGATCAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTTGTAAGTCTGTCTAATGGATTGTTTGGCTTGAAAACTTAATTTCTAGGTTTTCGTATTTTTGCCTATAATGTTCTGGATTCCTGAGTTTATGTTTGTTTATCTTGCAATTATTCAGTACACAGGTCACAGATAACAGTGTTTAGAAGGTCTTTATGAAATTGTTATGGGGAACTGCAATTGGTATTAGCTGTTAACAGAACAATCCAATGAATATTTTACTGACCCGTTTCAAAATGTTTATGCAAGTGAATGGTGTTAGATTATTTTTAACTTGCTTTTAGTTTACACTTGTTGCGATAAATTTACATGTGAATAACTGAATTATTGCTTTCAATCATTCTGGTTCATGTTCAGTTGAGCAACTTCCTCTTCAATACTACATGTGTTATTTACTTTGTAGGGTTGATGGAAATTTATTTACTTAAATATTCCATTGTAAACATGTTAGGACCGGAAATAAGCAGGTGTAAATGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAGAAGACAACGAGAAATATACCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTACGTCCACAAAGGAAATGAGCAATCCACTATAAATATGAGAGTATAAAATACAGAGAGAAACAACCTCAACCAATTCACTCAGAATTCATGAGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCCATAAATTCTCCCCCTAACCAAAACTCTCAAAGCCCTTAAGACTACATTGTGAATGCTGATTAAGTTAGAAGGAACATTCCTCTATTTATAGAGTCCTAAACCTTTTCCTACAAGAAAAGGATTAGTCAATCCAAAACTTTTTTCTAAAAGGAAAACCTATTCATGGTAAGAAATTTAGGGCAAATAAAACCCAACAAAACATTCATCTTTTAGGCTTGTCTGGGAAAATACTCCAAGCTAGACACTTTGATTGTTTTCTTTATTTTGAATTTATTGAGTTGCTTTTATTCTATTTGGGGAGGAACTATTGAGTTGGTTTTGCTGCACCATCATTGATACATAAGATTGTGTTTGAGTCACCAAGTGCATGCCCTCCTTGTTCTAGGGAACTATAGAACCTGTGCTCCTTTCAGTGATATGTCAATAATGATGTGCACATAGTAGCATTATAAGCTTCAGTTTGACGATTGGACGGGAAAAAGGTTTTAAATAGCCCACATATAGTTGGAGAAAGGTGATGTTAGAGTGCTGCCTTTCCAAAAAAATTTAAATCATGAATCTAGTTATAGTCACGTCCCTTTGATGGATTTTGGAGACTGGTTTCATGTATCTCTTGTTTCATCAATCTGGATTCTGCAAAGTGCAAACTTGTTTCTTATAGGCTTCCATTACTCTAAGTTGGACCTGTCTTATCACTTGGTGAATCTTTTCAGGTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAAGTTT</genome_strand>
        <mrna_strand>GAGGGAGATTCGACTTCCGGAAAATGAATGTGATCAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAAGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E687976" ref_strand="+" ref_description="SGN-E687976 [T3_tus_81_O09]">
      <seq>caggagaggtgttcgaagcatatacaccacagtagattctccacgcctcaccagatttgctcttcaacctcctaaatttgtggaggtggagtttgaaaacggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgcggtgagaaggtcatatctggtaggcgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattatttgatgacttgcataagactggaatctttacatgggactacttctaccatcttggaagtaacaaatttgccctcatgagaaattacatcagaactctgaagaaacatggactaagccgcgatccacctagacgaagatgaccttaagacgtgcccatgagaaggctgatccacactatttaagctggaaacatcctccttatatatgctcagagtgaaattgtgacataaaactgtactgttgcaaatattctaaagactagctcttgatatgttatcatatgttcagggatatttgtggtgtgctattttctagatctagagattgacatgtgatacaaaagaggtcattagtttctaaggaacattaaggaacctcttcgtttgtaatttagatttgggaagcatgttggtgttgcagaacaacatgcttgattgaatgaaaggaacagtanacgttgaaagttaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="13911" stop="10923"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13611" g_stop="13533" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13532" i_stop="12116" i_length="1417">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12115" g_stop="12008" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="187" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12007" i_stop="11848" i_length="160">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11847" g_stop="11783" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="252" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11782" i_stop="11697" i_length="86">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11696" g_stop="11226" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="723" r_length="471" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="727" polyA_stop="744"/>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E687976" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>723</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E687976" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13611" e_stop="13533"/>
          <exon e_start="12115" e_stop="12008"/>
          <exon e_start="11847" e_stop="11783"/>
          <exon e_start="11696" e_stop="11226"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTTGTAAGTCTGTCTAATGGATTGTTTGGCTTGAAAACTTAATTTCTAGGTTTTCGTATTTTTGCCTATAATGTTCTGGATTCCTGAGTTTATGTTTGTTTATCTTGCAATTATTCAGTACACAGGTCACAGATAACAGTGTTTAGAAGGTCTTTATGAAATTGTTATGGGGAACTGCAATTGGTATTAGCTGTTAACAGAACAATCCAATGAATATTTTACTGACCCGTTTCAAAATGTTTATGCAAGTGAATGGTGTTAGATTATTTTTAACTTGCTTTTAGTTTACACTTGTTGCGATAAATTTACATGTGAATAACTGAATTATTGCTTTCAATCATTCTGGTTCATGTTCAGTTGAGCAACTTCCTCTTCAATACTACATGTGTTATTTACTTTGTAGGGTTGATGGAAATTTATTTACTTAAATATTCCATTGTAAACATGTTAGGACCGGAAATAAGCAGGTGTAAATGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAGAAGACAACGAGAAATATACCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTACGTCCACAAAGGAAATGAGCAATCCACTATAAATATGAGAGTATAAAATACAGAGAGAAACAACCTCAACCAATTCACTCAGAATTCATGAGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCCATAAATTCTCCCCCTAACCAAAACTCTCAAAGCCCTTAAGACTACATTGTGAATGCTGATTAAGTTAGAAGGAACATTCCTCTATTTATAGAGTCCTAAACCTTTTCCTACAAGAAAAGGATTAGTCAATCCAAAACTTTTTTCTAAAAGGAAAACCTATTCATGGTAAGAAATTTAGGGCAAATAAAACCCAACAAAACATTCATCTTTTAGGCTTGTCTGGGAAAATACTCCAAGCTAGACACTTTGATTGTTTTCTTTATTTTGAATTTATTGAGTTGCTTTTATTCTATTTGGGGAGGAACTATTGAGTTGGTTTTGCTGCACCATCATTGATACATAAGATTGTGTTTGAGTCACCAAGTGCATGCCCTCCTTGTTCTAGGGAACTATAGAACCTGTGCTCCTTTCAGTGATATGTCAATAATGATGTGCACATAGTAGCATTATAAGCTTCAGTTTGACGATTGGACGGGAAAAAGGTTTTAAATAGCCCACATATAGTTGGAGAAAGGTGATGTTAGAGTGCTGCCTTTCCAAAAAAATTTAAATCATGAATCTAGTTATAGTCACGTCCCTTTGATGGATTTTGGAGACTGGTTTCATGTATCTCTTGTTTCATCAATCTGGATTCTGCAAAGTGCAAACTTGTTTCTTATAGGCTTCCATTACTCTAAGTTGGACCTGTCTTATCACTTGGTGAATCTTTTCAGGTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAA</genome_strand>
        <mrna_strand>CAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTANACGTTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E344223" ref_strand="+" ref_description="SGN-E344223 [cTOF-16-H12]">
      <seq>taggcgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattatttgatgacttgcataagactggaatctttacatgggactacttctaccatcttggaagtaacaaatttgccctcatgagaaattacatcagaactctgaagaaacatggactaagccgcgatccacctagacgaagatgaccttaagacgtgcccatgagaaggctgatccacactatttaagctggaaacatcctccttatatatgctcagagtgaaattgtgacataaaactgtactgttgcaaatattctaaagactagctcttgatatgttatcatatgttcagggatatttgtggtgtgctattttctagatctagagattgacatgtgatacaaaagaggtcattagtttctaaggaacattaaggaacctcttcgtttgtaatttagatttgggaagcatgttggtgttgcagaacaacatgcttgattgaatgaaaggaacagtaaacgttgaaagttaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="12136" stop="10923"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11836" g_stop="11783" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11782" i_stop="11697" i_length="86">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11696" g_stop="11226" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="525" r_length="471" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="529" polyA_stop="539"/>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E344223" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344223" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11836" e_stop="11783"/>
          <exon e_start="11696" e_stop="11226"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAA</genome_strand>
        <mrna_strand>TAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E418847" ref_strand="+" ref_description="SGN-E418847 [STM-28-O16]">
      <seq>tacacaccgcagtagactctccacgcctcaccagatttgctcttcaacctcctaaatttgtggaggttgagtttgaaaatggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgtggtgagaaggtcatatctggtaggtgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattgtttgatgacttgcataagactggtatctttacatgggactacttctaccatcttggaagtaacaaattcacccttatgagaaattacatcagaactctgaagaaacatggactaagccgggatccacctagacgaagatgaccttaagacgtggccatgagaaggctgatccacactatttaagctggaaaacatcctccccatatgctcagagtgaaatggtgacataaaattgtactgttgcaaatatttcaaagactagctcttgatatgctatcatatgttcagcggaatttgtggtgtgctatactctagatctagagattgaacatgcgacacaaaagaggtcattagtttctaaggaacattaaggangctctttgtttgtaattttgatttgggatgcatgttggtgttgcagaacatgcttgattgaatgaaaggaacagttcgttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="13891" stop="10937"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13591" g_stop="13533" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13532" i_stop="12116" i_length="1417">
            <donor d_prob="0.970" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12115" g_stop="12008" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="167" r_length="108" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12007" i_stop="11848" i_length="160">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11847" g_stop="11783" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="232" r_length="65" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11782" i_stop="11697" i_length="86">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.667" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11696" g_stop="11239" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="687" r_length="455" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E418847" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>690</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E418847" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13591" e_stop="13533"/>
          <exon e_start="12115" e_stop="12008"/>
          <exon e_start="11847" e_stop="11783"/>
          <exon e_start="11696" e_stop="11239"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTTGTAAGTCTGTCTAATGGATTGTTTGGCTTGAAAACTTAATTTCTAGGTTTTCGTATTTTTGCCTATAATGTTCTGGATTCCTGAGTTTATGTTTGTTTATCTTGCAATTATTCAGTACACAGGTCACAGATAACAGTGTTTAGAAGGTCTTTATGAAATTGTTATGGGGAACTGCAATTGGTATTAGCTGTTAACAGAACAATCCAATGAATATTTTACTGACCCGTTTCAAAATGTTTATGCAAGTGAATGGTGTTAGATTATTTTTAACTTGCTTTTAGTTTACACTTGTTGCGATAAATTTACATGTGAATAACTGAATTATTGCTTTCAATCATTCTGGTTCATGTTCAGTTGAGCAACTTCCTCTTCAATACTACATGTGTTATTTACTTTGTAGGGTTGATGGAAATTTATTTACTTAAATATTCCATTGTAAACATGTTAGGACCGGAAATAAGCAGGTGTAAATGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAGAAGACAACGAGAAATATACCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTACGTCCACAAAGGAAATGAGCAATCCACTATAAATATGAGAGTATAAAATACAGAGAGAAACAACCTCAACCAATTCACTCAGAATTCATGAGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCCATAAATTCTCCCCCTAACCAAAACTCTCAAAGCCCTTAAGACTACATTGTGAATGCTGATTAAGTTAGAAGGAACATTCCTCTATTTATAGAGTCCTAAACCTTTTCCTACAAGAAAAGGATTAGTCAATCCAAAACTTTTTTCTAAAAGGAAAACCTATTCATGGTAAGAAATTTAGGGCAAATAAAACCCAACAAAACATTCATCTTTTAGGCTTGTCTGGGAAAATACTCCAAGCTAGACACTTTGATTGTTTTCTTTATTTTGAATTTATTGAGTTGCTTTTATTCTATTTGGGGAGGAACTATTGAGTTGGTTTTGCTGCACCATCATTGATACATAAGATTGTGTTTGAGTCACCAAGTGCATGCCCTCCTTGTTCTAGGGAACTATAGAACCTGTGCTCCTTTCAGTGATATGTCAATAATGATGTGCACATAGTAGCATTATAAGCTTCAGTTTGACGATTGGACGGGAAAAAGGTTTTAAATAGCCCACATATAGTTGGAGAAAGGTGATGTTAGAGTGCTGCCTTTCCAAAAAAATTTAAATCATGAATCTAGTTATAGTCACGTCCCTTTGATGGATTTTGGAGACTGGTTTCATGTATCTCTTGTTTCATCAATCTGGATTCTGCAAAGTGCAAACTTGTTTCTTATAGGCTTCCATTACTCTAAGTTGGACCTGTCTTATCACTTGGTGAATCTTTTCAGGTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGG-AAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTG-ACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACA</genome_strand>
        <mrna_strand>TACACACCGCAGTAGACTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTTGAGTTTGAAAATGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGTGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGTGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTGTTTGATGACTTGCATAAGACTGGTATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTCACCCTTATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGGGATCCACCTAGACGAAGATGACCTTAAGACGTGGCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAAACATCCTCC--CCATATGCTCAGAGTGAAATGGTGACATAAAATTGTACTGTTGCAAATATTTCAAAGACTAGCTCTTGATATGCTATCATATGTTCAGCGGAATTTGTGGTGTGCTATACTCTAGATCTAGAGATTGAACATGCGACACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGANGCTCTTTGTTTGTAATTTTGATTTGGGATGCATGTTGGTGTTGCAG---AACATGCTTGATTGAATGAAAGGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E418848" ref_strand="-" ref_description="SGN-E418848 [STM-28-O16]">
      <seq>aaaatggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgtggtgagaaggtcatatctggtaggtgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattgtttgatgacttgcataagactggtatctttacatgggactacttctaccatcttggaagtaacaaattcacccttatgagaaattacatcagaactctgaagaaacatggactaagccgggatccacctagacgaagatgaccttaagacgtggccatgagaaggctgatccacactatttaagctggaaaacatcctccccatatgctcagagtgaaatggtgacattaaaattgtactgttgcaaatatttcaaagactagctcttgatatgctatcatatgttcagcggaatttgtggtgtgctatactctagatctagagattgaacatgcgacacaaaagaggtcattagtttctaaggaacattaaggaggctctttgtttgtaattttgatttgggatgcatgttggtgttgcagaacatgcttgattgaatgaagagaacagttcgttttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="12399" stop="10965"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12099" g_stop="12008" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12007" i_stop="11848" i_length="160">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11847" g_stop="11783" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="157" r_length="65" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11782" i_stop="11697" i_length="86">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.667" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11696" g_stop="11239" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="613" r_length="456" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E418848" ref_strand="-">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E418848" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="12099" e_stop="12008"/>
          <exon e_start="11847" e_stop="11783"/>
          <exon e_start="11696" e_stop="11239"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGG-AAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACA-TAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTG-ACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACA</genome_strand>
        <mrna_strand>AAAATGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGTGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGTGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTGTTTGATGACTTGCATAAGACTGGTATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTCACCCTTATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGGGATCCACCTAGACGAAGATGACCTTAAGACGTGGCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAAACATCCTCC--CCATATGCTCAGAGTGAAATGGTGACATTAAAATTGTACTGTTGCAAATATTTCAAAGACTAGCTCTTGATATGCTATCATATGTTCAGCGGAATTTGTGGTGTGCTATACTCTAGATCTAGAGATTGAACATGCGACACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAGGCTCTTTGTTTGTAATTTTGATTTGGGATGCATGTTGGTGTTGCAG---AACATGCTTGATTGAATGAAGAGAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E328488" ref_strand="+" ref_description="SGN-E328488 [cTOC-23-E13]">
      <seq>aggagaggtgttcgaagcatatacaccacagtagattctccacgcctcaccagatttgctcttcaacctcctaaatttgtggaggtggagtttgaaaacggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgcggtgagaaggtcatatctggtaggcgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattatttgatgacttgcataagactggaatctttacatgggactacttctaccatcttggaagtaacaaatttgccctcatgagaaattacatcagaactctgaagaaacatggactaagccgcgatccacctagacgaagatgaccttaagacgtgcccatgagaaggctgatccacactatttaagctggaaacatcctccttatatatgctcagagtgaaattgtgacataaaactgtactgttgcaaatattctaaagactagctcttgatatgttatcatatgttcagggatatttgtggtgtgctattttctagatctagagattgacatgtgatacaaaagaggtcattagtttctaaggaacattaaggaacctcttcgtttgtaatttagatttgggaagcatgttggtgttgcagaacaacatgcttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="13910" stop="10954"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13610" g_stop="13533" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13532" i_stop="12116" i_length="1417">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12115" g_stop="12008" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="186" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12007" i_stop="11848" i_length="160">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11847" g_stop="11783" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="251" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11782" i_stop="11697" i_length="86">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11696" g_stop="11254" g_length="443"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="694" r_length="443" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E328488" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>694</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E328488" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13610" e_stop="13533"/>
          <exon e_start="12115" e_stop="12008"/>
          <exon e_start="11847" e_stop="11783"/>
          <exon e_start="11696" e_stop="11254"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTTGTAAGTCTGTCTAATGGATTGTTTGGCTTGAAAACTTAATTTCTAGGTTTTCGTATTTTTGCCTATAATGTTCTGGATTCCTGAGTTTATGTTTGTTTATCTTGCAATTATTCAGTACACAGGTCACAGATAACAGTGTTTAGAAGGTCTTTATGAAATTGTTATGGGGAACTGCAATTGGTATTAGCTGTTAACAGAACAATCCAATGAATATTTTACTGACCCGTTTCAAAATGTTTATGCAAGTGAATGGTGTTAGATTATTTTTAACTTGCTTTTAGTTTACACTTGTTGCGATAAATTTACATGTGAATAACTGAATTATTGCTTTCAATCATTCTGGTTCATGTTCAGTTGAGCAACTTCCTCTTCAATACTACATGTGTTATTTACTTTGTAGGGTTGATGGAAATTTATTTACTTAAATATTCCATTGTAAACATGTTAGGACCGGAAATAAGCAGGTGTAAATGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAGAAGACAACGAGAAATATACCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTACGTCCACAAAGGAAATGAGCAATCCACTATAAATATGAGAGTATAAAATACAGAGAGAAACAACCTCAACCAATTCACTCAGAATTCATGAGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCCATAAATTCTCCCCCTAACCAAAACTCTCAAAGCCCTTAAGACTACATTGTGAATGCTGATTAAGTTAGAAGGAACATTCCTCTATTTATAGAGTCCTAAACCTTTTCCTACAAGAAAAGGATTAGTCAATCCAAAACTTTTTTCTAAAAGGAAAACCTATTCATGGTAAGAAATTTAGGGCAAATAAAACCCAACAAAACATTCATCTTTTAGGCTTGTCTGGGAAAATACTCCAAGCTAGACACTTTGATTGTTTTCTTTATTTTGAATTTATTGAGTTGCTTTTATTCTATTTGGGGAGGAACTATTGAGTTGGTTTTGCTGCACCATCATTGATACATAAGATTGTGTTTGAGTCACCAAGTGCATGCCCTCCTTGTTCTAGGGAACTATAGAACCTGTGCTCCTTTCAGTGATATGTCAATAATGATGTGCACATAGTAGCATTATAAGCTTCAGTTTGACGATTGGACGGGAAAAAGGTTTTAAATAGCCCACATATAGTTGGAGAAAGGTGATGTTAGAGTGCTGCCTTTCCAAAAAAATTTAAATCATGAATCTAGTTATAGTCACGTCCCTTTGATGGATTTTGGAGACTGGTTTCATGTATCTCTTGTTTCATCAATCTGGATTCTGCAAAGTGCAAACTTGTTTCTTATAGGCTTCCATTACTCTAAGTTGGACCTGTCTTATCACTTGGTGAATCTTTTCAGGTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGAT</genome_strand>
        <mrna_strand>AGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E478742" ref_strand="+" ref_description="SGN-E478742 [cSTD-6-H14]">
      <seq>cgaagcatacacaccgcagtagactctccacgcctcaccagatttgctcttcaacctcctaaatttgtggaggttgagtttgaaaatggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgtggtgagaaggtcatatctggtaggcgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggatattatttgatgacttgcataagactggtatctttacatgggactacttctaccatcttggaagtaacaaattcaccctcatgagaaattacatcagaacgctgaagaaacatggactaagccgggatccacctagacgaagatgaccttaagacgtggccatgagaaggctgatccacactatttaagctggaaaacatcctccccatatgctcagagtgaaatggtgacataaaattgtactgttgcaaatatttcaaagactagctcttgatatgctatcatatgttcagcggaatttgtggtgtgctatactctagatctagagattgaacatgcgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="13898" stop="11054"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13598" g_stop="13533" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13532" i_stop="12116" i_length="1417">
            <donor d_prob="0.970" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12115" g_stop="12008" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="174" r_length="108" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12007" i_stop="11848" i_length="160">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11847" g_stop="11783" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="239" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11782" i_stop="11697" i_length="86">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11696" g_stop="11353" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="583" r_length="344" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E478742" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E478742" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13598" e_stop="13533"/>
          <exon e_start="12115" e_stop="12008"/>
          <exon e_start="11847" e_stop="11783"/>
          <exon e_start="11696" e_stop="11353"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTTGTAAGTCTGTCTAATGGATTGTTTGGCTTGAAAACTTAATTTCTAGGTTTTCGTATTTTTGCCTATAATGTTCTGGATTCCTGAGTTTATGTTTGTTTATCTTGCAATTATTCAGTACACAGGTCACAGATAACAGTGTTTAGAAGGTCTTTATGAAATTGTTATGGGGAACTGCAATTGGTATTAGCTGTTAACAGAACAATCCAATGAATATTTTACTGACCCGTTTCAAAATGTTTATGCAAGTGAATGGTGTTAGATTATTTTTAACTTGCTTTTAGTTTACACTTGTTGCGATAAATTTACATGTGAATAACTGAATTATTGCTTTCAATCATTCTGGTTCATGTTCAGTTGAGCAACTTCCTCTTCAATACTACATGTGTTATTTACTTTGTAGGGTTGATGGAAATTTATTTACTTAAATATTCCATTGTAAACATGTTAGGACCGGAAATAAGCAGGTGTAAATGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAGAAGACAACGAGAAATATACCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTACGTCCACAAAGGAAATGAGCAATCCACTATAAATATGAGAGTATAAAATACAGAGAGAAACAACCTCAACCAATTCACTCAGAATTCATGAGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCCATAAATTCTCCCCCTAACCAAAACTCTCAAAGCCCTTAAGACTACATTGTGAATGCTGATTAAGTTAGAAGGAACATTCCTCTATTTATAGAGTCCTAAACCTTTTCCTACAAGAAAAGGATTAGTCAATCCAAAACTTTTTTCTAAAAGGAAAACCTATTCATGGTAAGAAATTTAGGGCAAATAAAACCCAACAAAACATTCATCTTTTAGGCTTGTCTGGGAAAATACTCCAAGCTAGACACTTTGATTGTTTTCTTTATTTTGAATTTATTGAGTTGCTTTTATTCTATTTGGGGAGGAACTATTGAGTTGGTTTTGCTGCACCATCATTGATACATAAGATTGTGTTTGAGTCACCAAGTGCATGCCCTCCTTGTTCTAGGGAACTATAGAACCTGTGCTCCTTTCAGTGATATGTCAATAATGATGTGCACATAGTAGCATTATAAGCTTCAGTTTGACGATTGGACGGGAAAAAGGTTTTAAATAGCCCACATATAGTTGGAGAAAGGTGATGTTAGAGTGCTGCCTTTCCAAAAAAATTTAAATCATGAATCTAGTTATAGTCACGTCCCTTTGATGGATTTTGGAGACTGGTTTCATGTATCTCTTGTTTCATCAATCTGGATTCTGCAAAGTGCAAACTTGTTTCTTATAGGCTTCCATTACTCTAAGTTGGACCTGTCTTATCACTTGGTGAATCTTTTCAGGTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGG-AAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTG-ACATGTGAT</genome_strand>
        <mrna_strand>CGAAGCATACACACCGCAGTAGACTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTTGAGTTTGAAAATGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGTGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GATATTATTTGATGACTTGCATAAGACTGGTATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTCACCCTCATGAGAAATTACATCAGAACGCTGAAGAAACATGGACTAAGCCGGGATCCACCTAGACGAAGATGACCTTAAGACGTGGCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAAACATCCTCC--CCATATGCTCAGAGTGAAATGGTGACATAAAATTGTACTGTTGCAAATATTTCAAAGACTAGCTCTTGATATGCTATCATATGTTCAGCGGAATTTGTGGTGTGCTATACTCTAGATCTAGAGATTGAACATGCGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E442955" ref_strand="+" ref_description="SGN-E442955 [cSTA-35-L7]">
      <seq>tacacaccgcagtagactctccacgcctcaccagatttgctcttcaacctcctaaatttgtggaggttgagtttgaaaatggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgtggtgagaaggtcatatctggtaggtgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattgtttgatgacttgcataagactggtatctttacatgggactacttctaccatcttggaagtaacaaattcacccttatgagaaattacatcagaactctgaagaaacatggactaagccgggatccacctagacgaagatgaccttaagacgtggccatgagaaggctgatccacactatttaagctggaaaacatnctccccatatgctcagagtgaaatggtgacataaaattgtactgttgcaaatatttcaaagactagctcttgatatgctatcatatgttcagcggaatttgtggtgtgctatactctagatctagagattgaacatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="13891" stop="11057"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13591" g_stop="13533" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13532" i_stop="12116" i_length="1417">
            <donor d_prob="0.970" d_score="0.98"/>
            <acceptor a_prob="0.971" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12115" g_stop="12008" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="167" r_length="108" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12007" i_stop="11848" i_length="160">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.986" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11847" g_stop="11783" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="168" r_stop="232" r_length="65" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11782" i_stop="11697" i_length="86">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.667" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11696" g_stop="11357" g_length="340"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="572" r_length="340" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E442955" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>572</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E442955" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13591" e_stop="13533"/>
          <exon e_start="12115" e_stop="12008"/>
          <exon e_start="11847" e_stop="11783"/>
          <exon e_start="11696" e_stop="11357"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTTGTAAGTCTGTCTAATGGATTGTTTGGCTTGAAAACTTAATTTCTAGGTTTTCGTATTTTTGCCTATAATGTTCTGGATTCCTGAGTTTATGTTTGTTTATCTTGCAATTATTCAGTACACAGGTCACAGATAACAGTGTTTAGAAGGTCTTTATGAAATTGTTATGGGGAACTGCAATTGGTATTAGCTGTTAACAGAACAATCCAATGAATATTTTACTGACCCGTTTCAAAATGTTTATGCAAGTGAATGGTGTTAGATTATTTTTAACTTGCTTTTAGTTTACACTTGTTGCGATAAATTTACATGTGAATAACTGAATTATTGCTTTCAATCATTCTGGTTCATGTTCAGTTGAGCAACTTCCTCTTCAATACTACATGTGTTATTTACTTTGTAGGGTTGATGGAAATTTATTTACTTAAATATTCCATTGTAAACATGTTAGGACCGGAAATAAGCAGGTGTAAATGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAGAAGACAACGAGAAATATACCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTACGTCCACAAAGGAAATGAGCAATCCACTATAAATATGAGAGTATAAAATACAGAGAGAAACAACCTCAACCAATTCACTCAGAATTCATGAGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCCATAAATTCTCCCCCTAACCAAAACTCTCAAAGCCCTTAAGACTACATTGTGAATGCTGATTAAGTTAGAAGGAACATTCCTCTATTTATAGAGTCCTAAACCTTTTCCTACAAGAAAAGGATTAGTCAATCCAAAACTTTTTTCTAAAAGGAAAACCTATTCATGGTAAGAAATTTAGGGCAAATAAAACCCAACAAAACATTCATCTTTTAGGCTTGTCTGGGAAAATACTCCAAGCTAGACACTTTGATTGTTTTCTTTATTTTGAATTTATTGAGTTGCTTTTATTCTATTTGGGGAGGAACTATTGAGTTGGTTTTGCTGCACCATCATTGATACATAAGATTGTGTTTGAGTCACCAAGTGCATGCCCTCCTTGTTCTAGGGAACTATAGAACCTGTGCTCCTTTCAGTGATATGTCAATAATGATGTGCACATAGTAGCATTATAAGCTTCAGTTTGACGATTGGACGGGAAAAAGGTTTTAAATAGCCCACATATAGTTGGAGAAAGGTGATGTTAGAGTGCTGCCTTTCCAAAAAAATTTAAATCATGAATCTAGTTATAGTCACGTCCCTTTGATGGATTTTGGAGACTGGTTTCATGTATCTCTTGTTTCATCAATCTGGATTCTGCAAAGTGCAAACTTGTTTCTTATAGGCTTCCATTACTCTAAGTTGGACCTGTCTTATCACTTGGTGAATCTTTTCAGGTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGG-AAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTG-ACATG</genome_strand>
        <mrna_strand>TACACACCGCAGTAGACTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTTGAGTTTGAAAATGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGTGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGTGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTGTTTGATGACTTGCATAAGACTGGTATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTCACCCTTATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGGGATCCACCTAGACGAAGATGACCTTAAGACGTGGCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAAACATNCTCC--CCATATGCTCAGAGTGAAATGGTGACATAAAATTGTACTGTTGCAAATATTTCAAAGACTAGCTCTTGATATGCTATCATATGTTCAGCGGAATTTGTGGTGTGCTATACTCTAGATCTAGAGATTGAACATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E396164" ref_strand="+" ref_description="SGN-E396164 [TUS-40-G5]">
      <seq>atcaggagaggtgttcgaagcatatacaccacagtagattctccacgcctcaccagatttgctcttcaacctcctaaatttgtggaggtggagtttgaaaacggtagtctgtataagttgtcagctgagtatttgagaatatacagccccgctgttgatagtaagatcagatcgatttgcggtgagaaggtcatatctggtaggcgtcatgtcggaattatgtctgcagaacctattggaaattatggagtgaggttattatttgatgacttgcataagactggaatctttacatgggactacttctaccatcttggaagtaacaaatttgccctcatgagaaattacatcagaactctgaagaaacatggactaagccgcgatccacctagacgaagatgaccttaggaggggggcatgaaaaggctgatccacactatttaagctggaaacatcctccttatatatgctcagagtgaaattgtgacataaaactgtac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="13913" stop="11151"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13613" g_stop="13533" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13532" i_stop="12116" i_length="1417">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12115" g_stop="12008" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="189" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12007" i_stop="11848" i_length="160">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11847" g_stop="11783" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="254" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11782" i_stop="11697" i_length="86">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.667" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11696" g_stop="11451" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="255" r_stop="500" r_length="246" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E396164" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E396164" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13613" e_stop="13533"/>
          <exon e_start="12115" e_stop="12008"/>
          <exon e_start="11847" e_stop="11783"/>
          <exon e_start="11696" e_stop="11451"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTTGTAAGTCTGTCTAATGGATTGTTTGGCTTGAAAACTTAATTTCTAGGTTTTCGTATTTTTGCCTATAATGTTCTGGATTCCTGAGTTTATGTTTGTTTATCTTGCAATTATTCAGTACACAGGTCACAGATAACAGTGTTTAGAAGGTCTTTATGAAATTGTTATGGGGAACTGCAATTGGTATTAGCTGTTAACAGAACAATCCAATGAATATTTTACTGACCCGTTTCAAAATGTTTATGCAAGTGAATGGTGTTAGATTATTTTTAACTTGCTTTTAGTTTACACTTGTTGCGATAAATTTACATGTGAATAACTGAATTATTGCTTTCAATCATTCTGGTTCATGTTCAGTTGAGCAACTTCCTCTTCAATACTACATGTGTTATTTACTTTGTAGGGTTGATGGAAATTTATTTACTTAAATATTCCATTGTAAACATGTTAGGACCGGAAATAAGCAGGTGTAAATGCGGAAGCTAGCAAAGCAAACCTCAAAAGACCACGAGTAAGAAGACAACGAGAAATATACCAAAAGACACAAAGATTTAACGTGATTCGGTCAATCGACCTACGTCCACAAAGGAAATGAGCAATCCACTATAAATATGAGAGTATAAAATACAGAGAGAAACAACCTCAACCAATTCACTCAGAATTCATGAGAGGTTCACACAAGTGATAACGTATCAAGCTTGTGACCCATAAATTCTCCCCCTAACCAAAACTCTCAAAGCCCTTAAGACTACATTGTGAATGCTGATTAAGTTAGAAGGAACATTCCTCTATTTATAGAGTCCTAAACCTTTTCCTACAAGAAAAGGATTAGTCAATCCAAAACTTTTTTCTAAAAGGAAAACCTATTCATGGTAAGAAATTTAGGGCAAATAAAACCCAACAAAACATTCATCTTTTAGGCTTGTCTGGGAAAATACTCCAAGCTAGACACTTTGATTGTTTTCTTTATTTTGAATTTATTGAGTTGCTTTTATTCTATTTGGGGAGGAACTATTGAGTTGGTTTTGCTGCACCATCATTGATACATAAGATTGTGTTTGAGTCACCAAGTGCATGCCCTCCTTGTTCTAGGGAACTATAGAACCTGTGCTCCTTTCAGTGATATGTCAATAATGATGTGCACATAGTAGCATTATAAGCTTCAGTTTGACGATTGGACGGGAAAAAGGTTTTAAATAGCCCACATATAGTTGGAGAAAGGTGATGTTAGAGTGCTGCCTTTCCAAAAAAATTTAAATCATGAATCTAGTTATAGTCACGTCCCTTTGATGGATTTTGGAGACTGGTTTCATGTATCTCTTGTTTCATCAATCTGGATTCTGCAAAGTGCAAACTTGTTTCTTATAGGCTTCCATTACTCTAAGTTGGACCTGTCTTATCACTTGGTGAATCTTTTCAGGTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAGGTAACTAGAGGAACACTTGCAGTTTTCTTTTACTGGGATATTCTCTTTGCAATTTTTGAAAACGAAGACGCATGATTTACTGGCAACATAGTTCCATCATCAAACTGGATTTAATATTGCACGATTTAAATTTTTCTAACTTATGTGCTTGTGTATTAAGGTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAGGTAATAAGAGTAAACAACTATTTGTGTCTTAACAATTTACTTTCACTTTTTGTTATTTCTCATTCTCTTCATATGGTTCAACCTAGGTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTAC</genome_strand>
        <mrna_strand>ATCAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAG................................................................................................................................................................GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG......................................................................................GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAGGAGGGGGGCATGAAAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E710437" ref_strand="+" ref_description="SGN-E710437 [FA55BG02]">
      <seq>ctttcttctggtgtatcctctgctttgctgccttcactttctcttctctactatttcaagggtttcatcaatggcggccggcgacaaccacagccctaaccgctgttaagccaattatacaaaccgtcgaattcccggacgagacagttgttttcctaaaataccctccttcaactcccttattcacaaaacatgacctatactgcctctaccttgatcctaactcttctcaacctcctgaatcagttgaaaacgatgaattattggcccaacagctcgttcgatgtcccctggttaagccacgtggagtcctgacgtcacttttcgtcaagtctaccggttacaccctctccattggaccatcacgtcggtggaattcgttggcctatgaggccatgatcgatcgcgataacacgaccatagtgtttgttaaagggtttaatcttcgtggtggaagacaatcgcacgcttcaaaattcaagtgtgtttatggttgggatgttaagaatcccaaacttgtgttacaatcagatgttgtatccattgctcaagaagttgttcgatgtaataccccagtgagcatactgaataatccagagaggtttattggtactactaacatgcccattaaggtttctgttacaatggttggtaacgaacctttagactctataccgagtcctaaacgccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="+" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="24335" stop="25749"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24635" g_stop="24694" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24695" i_stop="24818" i_length="124">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24819" g_stop="25449" g_length="631"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="691" r_length="631" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="+" ref_id="SGN-E710437" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>691</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E710437" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24635" e_stop="24694"/>
          <exon e_start="24819" e_stop="25449"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCTTCTGGTGTATCCTCTGCTTTGCTGCCTTCACTTTCTCTTCTCTACTATTTCAAGGTAGTTAAATTCAATTCATTTCCAAACAAGCATAAATTTAGTTTGCGGTTAATATGGAGTATGATTGATTAAACCTTAATTACGATCTATTATAATTAAGTACCTTTCATTTTGCTAACTTCAGGGTTTCATCAATGGCGGCCGGCGACAACCACAGCCCTAACCGCTGTTAAGCCAATTATACAAACCGTCGAATTCCCGGACGAGACAGTTGTTTTCCTAAAATACCCTCCTTCAACTCCCTTATTCACAAAACATGACCTATACTGCCTCTACCTTGATCCTAACTCTTCTCAACCTCCTGAATCAGTTGAAAACGATGAATTATTGGCCCAACAGCTCGTTCGATGTCCCCTGGTTAAGCCACGTGGAGTCCTGACGTCACTTTTCGTCAAGTCTACCGGTTACACCCTCTCCATTGGACCATCACGTCGGTGGAATTCGTTGGCCTATGAGGCCATGATCGATCGCGATAACACGACCATAGTGTTTGTTAAAGGGTTTAATCTTCGTGGTGGAAGACAATCGCACGCTTCAAAATTCAAGTGTGTTTATGGTTGGGATGTTAAGAATCCCAAACTTGTGTTACAATCAGATGTTGTATCCATTGCTCAAGAAGTTGTTCGATGTAATACCCCAGTGAGCATACTGAATAATCCAGAGAGGTTTATTGGTACTAGTAACATGCCCATTAAGGTTTCTGTTAGAATGGTTGGTAAGGAACCTTTAGACTCTATAGCGAGTCCTAAACGCCG</genome_strand>
        <mrna_strand>CTTTCTTCTGGTGTATCCTCTGCTTTGCTGCCTTCACTTTCTCTTCTCTACTATTTCAAG............................................................................................................................GGTTTCATCAATGGCGGCCGGCGACAACCACAGCCCTAACCGCTGTTAAGCCAATTATACAAACCGTCGAATTCCCGGACGAGACAGTTGTTTTCCTAAAATACCCTCCTTCAACTCCCTTATTCACAAAACATGACCTATACTGCCTCTACCTTGATCCTAACTCTTCTCAACCTCCTGAATCAGTTGAAAACGATGAATTATTGGCCCAACAGCTCGTTCGATGTCCCCTGGTTAAGCCACGTGGAGTCCTGACGTCACTTTTCGTCAAGTCTACCGGTTACACCCTCTCCATTGGACCATCACGTCGGTGGAATTCGTTGGCCTATGAGGCCATGATCGATCGCGATAACACGACCATAGTGTTTGTTAAAGGGTTTAATCTTCGTGGTGGAAGACAATCGCACGCTTCAAAATTCAAGTGTGTTTATGGTTGGGATGTTAAGAATCCCAAACTTGTGTTACAATCAGATGTTGTATCCATTGCTCAAGAAGTTGTTCGATGTAATACCCCAGTGAGCATACTGAATAATCCAGAGAGGTTTATTGGTACTACTAACATGCCCATTAAGGTTTCTGTTACAATGGTTGGTAACGAACCTTTAGACTCTATACCGAGTCCTAAACGCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E420334" ref_strand="+" ref_description="SGN-E420334 [STM-31-G1]">
      <seq>cacaatgttaagaaaccaggccagcttcttgaaagagtggatcatgtaccatactagaatcggagtacagcgttggtttatttatgataataacagcttggacgatattgatgacgtcattaagctattatctatggatgggaacataaatgtgacacgacatgtttggccttggatcaagactcaagaggcaggttttgctcattgtgcattacgagctagagatgtatgtgaatgggttggttttatggatgtcgatgagttcttccacttgcctactggtatgtcactgcttgacatattaagaaaccaatcaaggagtagtaatagtaaagttgctgagttgcgggtgtcatgtcataattttggaccatctggtctcaaacatgtcccgacacaaggggtcaccgtggggtacaattgcaggatgattgcacctgagaggcacaagagtattgtgaaaccggaagcgttgaattcaacattaatcaatgtggttcaccattttcatttaaagtctgagtttagatatgcaaatatggatagaaatgtgctggtgattaaccattacaagtatcaagtttgggatgtcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="+" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="25198" stop="26380"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25498" g_stop="26080" g_length="583"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="595" r_length="595" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="+" ref_id="SGN-E420334" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E420334" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25498" e_stop="26080"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAATGTTAAGAAACCAGGCCAGCTTCTTGAAAGAGTGGATCATGTACCATACTAGAATCGGAGTACAGCGTTGGTTCATTTATGATAATAACAGCTTGGACGATATTGATGATGTCATTAAGCTATTATC---------GAACATAAATGTGACACGACATGTTTGGCCTTGGATCAAGACTCAAGAGGCAGGTTTTGCTCATTGTGCATTACGAGCTAGAGATGTGTGTGAATGGGTTGGTTTTATGGATGTGGATGAGTTCTTCCACTTGCCTACTGGTATGTCACTGCTTGACATATTAAGAAACCAATCAA-G-G-AGTAATAGTAAAGTTGCTGAGTTGCGGGTGTCATGTCATAATTTTGGACCATCTGGTCTCAAACATGTCCCGACACAAGGGGTCACCATGGGGTACAATTGCAGGATGATTGCACCTGAGAGGCATAAGAGTATTGTGAAACCTGAAGCATTGAATTCAACATTAATCAATGTGGTTCACCATTTTCATTTAAAGTCTGAGTTTAGATATGCCAATATGGATAGAAATGTGCTTGTGATTAACCATTACAAGTATCAAGTTTGGGATGTCTTC</genome_strand>
        <mrna_strand>CACAATGTTAAGAAACCAGGCCAGCTTCTTGAAAGAGTGGATCATGTACCATACTAGAATCGGAGTACAGCGTTGGTTTATTTATGATAATAACAGCTTGGACGATATTGATGACGTCATTAAGCTATTATCTATGGATGGGAACATAAATGTGACACGACATGTTTGGCCTTGGATCAAGACTCAAGAGGCAGGTTTTGCTCATTGTGCATTACGAGCTAGAGATGTATGTGAATGGGTTGGTTTTATGGATGTCGATGAGTTCTTCCACTTGCCTACTGGTATGTCACTGCTTGACATATTAAGAAACCAATCAAGGAGTAGTAATAGTAAAGTTGCTGAGTTGCGGGTGTCATGTCATAATTTTGGACCATCTGGTCTCAAACATGTCCCGACACAAGGGGTCACCGTGGGGTACAATTGCAGGATGATTGCACCTGAGAGGCACAAGAGTATTGTGAAACCGGAAGCGTTGAATTCAACATTAATCAATGTGGTTCACCATTTTCATTTAAAGTCTGAGTTTAGATATGCAAATATGGATAGAAATGTGCTGGTGATTAACCATTACAAGTATCAAGTTTGGGATGTCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E420335" ref_strand="+" ref_description="SGN-E420335 [STM-31-G1]">
      <seq>tacttttttttacattcaactttcattttcataatacctttgtgttgtgacgtaaattcatgtacaaaaagaatatatggactatttcatgtacaaataaaatagcaaaagaaattagatcctcaaagtcaaaaccttatgttgcctctgatacgaaataatttcatgttgtggagtcatgtcagtgacttttgccagggtaacttgccagtgtttgggtcggtgaacatctgtgctactcgatccttaaggccagtgtcagtaacttcacaaaatcgactagaccaatctggtggttcaacagctcgtgtccctaaacctggggcacgatccctggacccaacatttctgtgttgttgccaatcagaaacataagtagccaccctcctgtagaacttctccttgaagacatcccaaacttgatacttgtaatggttaatcaccagcacatttctatccatatttgcatatcntaactcagactttaaatgaaaatggtgaaccacattgattaatgttgaattcaacgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="26765" stop="25654"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26472" g_stop="25954" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="531" r_length="531" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E420335" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E420335" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26472" e_stop="25954"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATACATTGAACATTCAACTTCCATTTTCATATTACCTTTGTGTTGTGACGTAAATTGATGTACAAAAAGAATATATGGACTATTTCATGTACAAATAAAATAGCAAAAGAAATTAGATCCTCAAAGTCAAAA----A--------CTGATATGAAATAATTTCATGTTGCGGCGTCATGTCAGTGATTTTTGCCAGGGTAACTTGCCAGTGTTTGGGTCGGTGAACATCTCTGCTACTCGATCTTTTAGGCCAGTGTCAGTAACTTCACAAAATCGACTAGACCAATCTGGTGGTTCAACGGCTCGTGTCCCTAAACCAGGGGCACGATCCCTGGACCCAACATTTCTCTGTTGTTGCCAATCAGAAACATAAGTAGCCACCCTCCTGTAGAACTTCTCCTTGAAGACATCCCAAACTTGATACTTGTAATGGTTAATCACAAGCACATTTCTATCCATATTGGCATATCTAAACTCAGACTTTAAATGAAAATGGTGAACCACATTGATTAATGTTGAATTCAATGCT</genome_strand>
        <mrna_strand>TACTTTTTTTTACATTCAACTTTCATTTTCATAATACCTTTGTGTTGTGACGTAAATTCATGTACAAAAAGAATATATGGACTATTTCATGTACAAATAAAATAGCAAAAGAAATTAGATCCTCAAAGTCAAAACCTTATGTTGCCTCTGATACGAAATAATTTCATGTTGTGGAGTCATGTCAGTGACTTTTGCCAGGGTAACTTGCCAGTGTTTGGGTCGGTGAACATCTGTGCTACTCGATCCTTAAGGCCAGTGTCAGTAACTTCACAAAATCGACTAGACCAATCTGGTGGTTCAACAGCTCGTGTCCCTAAACCTGGGGCACGATCCCTGGACCCAACATTTCTGTGTTGTTGCCAATCAGAAACATAAGTAGCCACCCTCCTGTAGAACTTCTCCTTGAAGACATCCCAAACTTGATACTTGTAATGGTTAATCACCAGCACATTTCTATCCATATTTGCATATCNTAACTCAGACTTTAAATGAAAATGGTGAACCACATTGATTAATGTTGAATTCAACGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E730854" ref_strand="+" ref_description="SGN-E730854 [LA25BF06]">
      <seq>tggagatgataacctctaagggttgctgagccccaagttccggtcggtggcagctatggctggttgggatgaagaggctcttctcatggccagtcttgttgtcgaagacacacctgatcgcctttctaagcaaaagaaacgttctgatttgctgcatttcaagactcccccaacaaattctagaaggaaaagaagggctcagaaaaggagccctgcgtccataactgcaactgttcttgatctggaagaccaagacactgcaaagcaagaaagcgagaaaaaggaggcagaattgaaattagacgagaaaggagatgaggcattggaagaacagggttgttctgttgctacatcttctactaagaagatagaaccaaaatccattgagaaagcagacacgaaagaagctgaagcatcagaggaacaggggtgttctgtttcttcttcttctgcagcatttccctccattgatctacttcgtgaagagctttcttgtgctatttgtttggagatctgttttgaaccgagtaccactccttgtggtcacagtttttgtaagaagtgtttgcgatctgctgctgataaatgtggaaagaaatgtcccaagtgcaggcagcttatcagcaatggtagatcatgcactgtaaatacagtactttggaatacaattcaactgttgtttcccaaagaagtagaaacaagaaaagcagctgctgatttgagtagtagagaagctaaacngtcaagtccagtaagagctgttgctactcattctaacagcagaacgacaagagtcctgctacctaacagtccagaatctggtcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="29205" stop="27012"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28905" g_stop="28720" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="186" r_length="186" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28719" i_stop="28556" i_length="164">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28555" g_stop="28473" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="187" r_stop="269" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28472" i_stop="28402" i_length="71">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28401" g_stop="28172" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="499" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28171" i_stop="28052" i_length="120">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="28051" g_stop="28002" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="500" r_stop="549" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="28001" i_stop="27898" i_length="104">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27897" g_stop="27823" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="550" r_stop="624" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="27822" i_stop="27514" i_length="309">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="27513" g_stop="27312" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="625" r_stop="826" r_length="202" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E730854" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>826</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E730854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28905" e_stop="28720"/>
          <exon e_start="28555" e_stop="28473"/>
          <exon e_start="28401" e_stop="28172"/>
          <exon e_start="28051" e_stop="28002"/>
          <exon e_start="27897" e_stop="27823"/>
          <exon e_start="27513" e_stop="27312"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGATGATAAAGTCGAAGGGTTGCTGAGCCCCAAGTTCCGGTCGGTGGCAGCTATGGCTGGTTGGGATGAAGAGGCTCTTCTCATGGCCAGTCTTGTTGTCGAAGACACACCTGATCGCCTTTCTAAGCAAAAGAAACGTTCTGATTTGCTGCATTTCAAGACTCCCCCAACAAATTCTAGAAGGTACTTGCACCATTTTTTTTAGATTTTAAATAAGAAGCGAATTCAGGAATTAAAATCAAATCAATTAATCAGATAGATCATCTCTATTTTATCCGATTGGATTATCAGTCGTTCTTCTTTTTGTTTGGATTATTGGGAAATGCATAAATTTGTCATCTTTTCAGGAAAAGAAGGGCTCAGAAAAGGAGCCCTGCGTCCATAACTGCAACTGTTCTTGATCTGGAAGACCAAGACACTGCAAAGCAAGGTAAATCATGATTTTCAAGAAGAGTTTGTGTTATGAATAATGGATTGTGTCCTGATGTTAATGTTCTGCAGAAAGCGAGAAAAAGGAGGCAGAATTGAAATTAGACGAGAAAGGAGATGAGGCATTGGAAGAACAGGGTTGTTCTGTTGCTACATCTTCTACTAAGAAGATAGAACCAAAATCCATTGAGAAAGCAGACACGAAAGAAGCTGAAGCATCAGAGGAACAGGGGTGTTCTGTTTCTTCTTCTTCTGCAGCATTTCCCTCCATTGATCTACTTCGTGAAGAGCTTTCTTGTGCTGTAAGTGTTGTAAATCCGTTCTTGAACCTTGGTGCCCCTACCTGTTTATCAATTGAGGGTGTCTTTTTTTCTATTTTCCTATTTTATTGTAGTATAAACATGATTTCTTTGAATTTGCAGATTTGTTTGGAGATCTGTTTTGAACCGAGTACCACTCCTTGTGGTCACAGGTACGATCTCAATGGCATCCTCATCAACTTATATTCATAAATCAATACATATAGGCATTTTCAGTAACTGACTCTGACAAATTTGGTAAAAATCATATCTGTAGTTTTTGTAAGAAGTGTTTGCGATCTGCTGCTGATAAATGTGGAAAGAAATGTCCCAAGTGCAGGCAGCTTATCAGGTACTGTTAGGATGCTATTTCATTTCAGTTATATCCCTATTTCATTTGATATTTTTCATTTCCTGTGAGCCAAGTTGGCTGATCTTTGAAGCTAATTGGATTATAGATCAACCCAATGTTTTTCAAAAACTACATGAATAGTACTAAGTTGCAAAGTTCACATTATCAAAGTTTACATAGTTTGAGTCCTGAAAAAGAAATGTCACATAAACCAACTCAGATAGAGTATTAAATAAGCTTGAAAAGGATTTATCATGGTTCTATTGTTTCAAGTATGACGTATTCCTATTAAACTTGACTTCTTTGCAGCAATGGTAGATCATGCACTGTAAATACAGTACTTTGGAATACAATTCAACTGTTGTTTCCCAAAGAAGTAGAAACAAGAAAAGCAGCTGCTGATTTGAGTAGTAGAGAAGCTAAAC-GTCAAAGTCCAGTAAGAGCTGTTGCTACTCATTCTAACAGCAGAACGACAAGAGTCCTGCTACTTAACAGTCCAGAATCTGGTCCT</genome_strand>
        <mrna_strand>TGGAGATGATAACCTCTAAGGGTTGCTGAGCCCCAAGTTCCGGTCGGTGGCAGCTATGGCTGGTTGGGATGAAGAGGCTCTTCTCATGGCCAGTCTTGTTGTCGAAGACACACCTGATCGCCTTTCTAAGCAAAAGAAACGTTCTGATTTGCTGCATTTCAAGACTCCCCCAACAAATTCTAGAAG....................................................................................................................................................................GAAAAGAAGGGCTCAGAAAAGGAGCCCTGCGTCCATAACTGCAACTGTTCTTGATCTGGAAGACCAAGACACTGCAAAGCAAG.......................................................................AAAGCGAGAAAAAGGAGGCAGAATTGAAATTAGACGAGAAAGGAGATGAGGCATTGGAAGAACAGGGTTGTTCTGTTGCTACATCTTCTACTAAGAAGATAGAACCAAAATCCATTGAGAAAGCAGACACGAAAGAAGCTGAAGCATCAGAGGAACAGGGGTGTTCTGTTTCTTCTTCTTCTGCAGCATTTCCCTCCATTGATCTACTTCGTGAAGAGCTTTCTTGTGCT........................................................................................................................ATTTGTTTGGAGATCTGTTTTGAACCGAGTACCACTCCTTGTGGTCACAG........................................................................................................TTTTTGTAAGAAGTGTTTGCGATCTGCTGCTGATAAATGTGGAAAGAAATGTCCCAAGTGCAGGCAGCTTATCAG.....................................................................................................................................................................................................................................................................................................................CAATGGTAGATCATGCACTGTAAATACAGTACTTTGGAATACAATTCAACTGTTGTTTCCCAAAGAAGTAGAAACAAGAAAAGCAGCTGCTGATTTGAGTAGTAGAGAAGCTAAACNGTC-AAGTCCAGTAAGAGCTGTTGCTACTCATTCTAACAGCAGAACGACAAGAGTCCTGCTACCTAACAGTCCAGAATCTGGTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E355484" ref_strand="+" ref_description="SGN-E355484 [cTOS-25-K7]">
      <seq>gctatcttcttgctggatacttttcctatatttgtggcttacccttggctccttacataacattttatcccatggccgccattgggtttatatcatgtgcttttaggatcatagagaacagaagtaaggaaaagggggaaatgtaccatcaccgtaggaaacactctcataaacactaaagcgaaaatactcccactatactatactgccacattcagaatggttctgcaatatatgttctagttgacatgcctcaatttgtttgatgtgtaattttcattttcacaggagtagaatatcaacttgtgtatggctttaattctactagtgattcaatcattatatttgtcgcacaaatttggttatggtctttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="30025" stop="29050"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29725" g_stop="29342" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E355484" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355484" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29725" e_stop="29342"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTATCTTCTTGCTGGATACTTTTCCTATATTTGTGGCTTAGCCTTGGCTCCTTACATAACATTTTATCCCATGGCCGCCATTGGGTTTATATCATGTGCTTTTAGGATCATAGAGAAGAGAAGTAGGGAAAAGGGGGAAATGTACCATCACCGTAGGAAACACTCTCATAAACACTAAAGTGAAAATACTCCCACTATACGATAGTGCCACATTCAGAATGGTTCTGCAATAGATGTTCTAGTTGACATGCCTCAATTTGTTTGATGTGTAATTTTCATTTTCAGAGGAGTAGAATATCAGCTTGTGTATGGCTTTAATTCTACAAGTGATTCAATCATTATATTTGTCGCAAAAATTTGTTTATGGTCTTTCAACTTAAACC</genome_strand>
        <mrna_strand>GCTATCTTCTTGCTGGATACTTTTCCTATATTTGTGGCTTACCCTTGGCTCCTTACATAACATTTTATCCCATGGCCGCCATTGGGTTTATATCATGTGCTTTTAGGATCATAGAGAACAGAAGTAAGGAAAAGGGGGAAATGTACCATCACCGTAGGAAACACTCTCATAAACACTAAAGCGAAAATACTCCCACTATACTATACTGCCACATTCAGAATGGTTCTGCAATATATGTTCTAGTTGACATGCCTCAATTTGTTTGATGTGTAATTTTCATTTTCACAGGAGTAGAATATCAACTTGTGTATGGCTTTAATTCTACTAGTGATTCAATCATTATATTTGTCGCACAAATTTGGTTATGGTCTTTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E354617" ref_strand="+" ref_description="SGN-E354617 [cTOS-17-L21]">
      <seq>gctatcttcttgctggatacttttcctatatttgtggcttagccttggctccttacataacattttatcccatggccgccattgggtttatatcatgtgcttttaggatcatagagaagagaagtagggaaaagggggaaatgtaccatcaccgtaggaaacactctcataaacactaaagtgaaaatactcccactatacgatagtgccacattcagaatggttctgcaatagatgttctagttgacatgcctcaatttgtttgatgtgtaattttcattttcagaggagtagaatatcagcttgtgtatggctttaattctacaagtgattcaatcattatatttgtcgcaaaaatttgtttatggtctttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="30025" stop="29050"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29725" g_stop="29342" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E354617" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E354617" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29725" e_stop="29342"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTATCTTCTTGCTGGATACTTTTCCTATATTTGTGGCTTAGCCTTGGCTCCTTACATAACATTTTATCCCATGGCCGCCATTGGGTTTATATCATGTGCTTTTAGGATCATAGAGAAGAGAAGTAGGGAAAAGGGGGAAATGTACCATCACCGTAGGAAACACTCTCATAAACACTAAAGTGAAAATACTCCCACTATACGATAGTGCCACATTCAGAATGGTTCTGCAATAGATGTTCTAGTTGACATGCCTCAATTTGTTTGATGTGTAATTTTCATTTTCAGAGGAGTAGAATATCAGCTTGTGTATGGCTTTAATTCTACAAGTGATTCAATCATTATATTTGTCGCAAAAATTTGTTTATGGTCTTTCAACTTAAACC</genome_strand>
        <mrna_strand>GCTATCTTCTTGCTGGATACTTTTCCTATATTTGTGGCTTAGCCTTGGCTCCTTACATAACATTTTATCCCATGGCCGCCATTGGGTTTATATCATGTGCTTTTAGGATCATAGAGAAGAGAAGTAGGGAAAAGGGGGAAATGTACCATCACCGTAGGAAACACTCTCATAAACACTAAAGTGAAAATACTCCCACTATACGATAGTGCCACATTCAGAATGGTTCTGCAATAGATGTTCTAGTTGACATGCCTCAATTTGTTTGATGTGTAATTTTCATTTTCAGAGGAGTAGAATATCAGCTTGTGTATGGCTTTAATTCTACAAGTGATTCAATCATTATATTTGTCGCAAAAATTTGTTTATGGTCTTTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E356718" ref_strand="+" ref_description="SGN-E356718 [cTOS-21-C14]">
      <seq>gctatcttcttgctggatacttttcctatatttgtggcttagccttggctccttacataacattttatcccatggccgccattgggtttatatcatgtgcttttaggatcatagagaagagaagtagggaaaagggggaaatgtaccatcaccgtaggaaacactctcataaacactaaagtgaaaatactcccactatacgatagtgccacattcagaatggttctgcaatagatgttctagttgacatgcctcaatttgtttgatgtgtaattttcattttcagaggagtagaatatcagcttgtgtatggctttaattctacaagtgattcaatcattatatttgtcgcaaaaatttgtttatggtctttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="30025" stop="29050"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29725" g_stop="29342" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E356718" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E356718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29725" e_stop="29342"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTATCTTCTTGCTGGATACTTTTCCTATATTTGTGGCTTAGCCTTGGCTCCTTACATAACATTTTATCCCATGGCCGCCATTGGGTTTATATCATGTGCTTTTAGGATCATAGAGAAGAGAAGTAGGGAAAAGGGGGAAATGTACCATCACCGTAGGAAACACTCTCATAAACACTAAAGTGAAAATACTCCCACTATACGATAGTGCCACATTCAGAATGGTTCTGCAATAGATGTTCTAGTTGACATGCCTCAATTTGTTTGATGTGTAATTTTCATTTTCAGAGGAGTAGAATATCAGCTTGTGTATGGCTTTAATTCTACAAGTGATTCAATCATTATATTTGTCGCAAAAATTTGTTTATGGTCTTTCAACTTAAACC</genome_strand>
        <mrna_strand>GCTATCTTCTTGCTGGATACTTTTCCTATATTTGTGGCTTAGCCTTGGCTCCTTACATAACATTTTATCCCATGGCCGCCATTGGGTTTATATCATGTGCTTTTAGGATCATAGAGAAGAGAAGTAGGGAAAAGGGGGAAATGTACCATCACCGTAGGAAACACTCTCATAAACACTAAAGTGAAAATACTCCCACTATACGATAGTGCCACATTCAGAATGGTTCTGCAATAGATGTTCTAGTTGACATGCCTCAATTTGTTTGATGTGTAATTTTCATTTTCAGAGGAGTAGAATATCAGCTTGTGTATGGCTTTAATTCTACAAGTGATTCAATCATTATATTTGTCGCAAAAATTTGTTTATGGTCTTTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E746474" ref_strand="+" ref_description="SGN-E746474 [GI|47104980]">
      <seq>gatacactgagacgtctcactacgcctttcctaaaattgggattcattcccttttctggaaaggcacacacttatctttactttcttgattcttgattcttgtcgccttcaaccaaagatttgtcaaaattcctattatcattgcaacaaccatagatctccaatcaggtgggttattgaaccgatcaagatgaagtggatgggcggtagcgtgagccaaaacatgcaaggctgcagagcgaaatttagagtgattgcattggttctacttgctatatctataggtttagctggtctttatagcatgctaaaacccatatctaatggatgtaccatgacatacatgtatcctacttatatccctgtacctacaccgaaaaatctgtcgtccatgaagtatggattacatctataccatgaaggatggagaaagattaatttcagcgatcatcttaagacacttagtggagttcctgttctttttatccctggcaatggtggaagctacaaacaggtgagatctgtggctgcagaatctgatagagcttatcaaggaggtcctcttgagcacagcttttaccaagaagcctctctaactctcggagagggagtagattttgatgtcaccagcactcctttaccctatcaatacacatccatgcttgactggtttgctgtggatcttgaaggtgaacattctgcaatggatggtcgaattcttgaagaacacacagattatgttgtatatgccattcacaggatattggatcattataaagagtcccacgatgcacgagttaaggaaggtgctgctgtgtctaggagtcctccgagaagtgtgatattggttggtcattccatgggtggttttgttgctagagctgcgattgtccacccagatttaaggaaatctgctgttgaaactgttctgacactttcgtctccacaccagtcgcctcctctggctctgcagccatcacttggtcagtattatgcacgagtaaatcacgaatggaggaaaggatacgaggtccaaacttctcgttcagggcatcatctgtctgatccactactctctcatgttgttgttgtctccatttctggtggttatcatgattaccaggtccgatcaaatttacaatcacttgatggtattgtgcctcctacccatggctttatgattagtagcacaagcatgaaaaatgtgtggttgtcaatggagcaccaggttatcttgtggtgtaatcagcttgttgtccaagtatcacatactcttcttagtctggtagaccaggggactggacaacctatatctgatgttcgaaaaaggctggcaatcttcacaaaaatgcttcatagtgggatacctccaaattttaattggttaaagcagtcacagctgcctcatataccaattgaagatggagaagctaaatctggatctcaagcacatagagtgtattcttgccctaataacatccattggagtgatgatgcacttgaaagagatttatacatcgagacaaccacagttacagttttagcgatggacgggagaaggcggtggttggacattgagaagttggggtctaacggcaaaaaccattttgtttttgtcacaaatctttctccatgttccggtgtacgactgcacctttggcctgagaaaggaactgaagtttccactttaccgatcaataaacgggttttagaagttacatcaaagatggtgcaaattccatctggaccagctccgaggcaggttgaaccaggtactcagactgagcaggcacctccctctgctgtattttggttgcacccagaggatatgcgtggtttcagatatctgaccatctcagtggcacctcgcatggctgtttcaggaagacctccaccagccacttccatgggagttgggcaattttttaaaccagcagacggagaaacagccttatcttctgggtcgttgattcggtctatgttttctttacaggagatgacgttgaatgaggatcatcctcttgcactcaatctgtctttctctgttagcttgggtctcatgcctgtgacgttatctgtcaaaacaactggttgtggaataagaaagtcagagttcactgctgatgaaactggagagatggaaattgacaggctgtgtaaacttcgctgtttccctcctgtagcaattgcttgggatttcacgtccggtcttcatatttttcctaatctgttctcagaaacaattcttgtggattcctctccagcactctggacttccagcctagggtcagaaaagaccaacgttatattgctgattgatccacattgttcgtacaaaacaagtattggtgttaatgtaacctctgcagctaagagattttcgcttttatatttcccacagattactggttttgcaattgctgttgtcttttttgctttaatgcggcaagcacgacaatgggagcttgacctgcctataccttcactccttacagcagttgaatcaaatttgcggatgccattgccctttctatgtttggccctgctacctatcttatttgctcttgtactttcctgcctcatttctctacctcttcctccagccataagtttcatctctgtctcaacaatctgttacttatgtgcaaatggagtggtggctgtgctgatatcagcctcccagttgttgttctacgttagtgcatctttacatgtattcatcaagaaacggtcgcaaacacgggaacataacttttctcctcttttcactgccttcctgtcatccaagcattgggtcttcttttgctggtcatttctcatgctgtgtgctcccacaattccctgtccagttttttgatggcttcatttcacagccgtacccagactaaggagttcatagaatctgggaacagacgtcagagtggatcgaagcagtccatacccgagcatgatggtgaaatcaacacgcatgttcctcagaaggagagtaattccagtagtctggactcagtaaaaagctatggtgacacccaattagagatcttcaatcatcggcatggcttgcttgtattacacttgcttgcaatgctgatgtttgtcccttcatttattgcgtggatccagagaatggggatcggtcatagcttgccgtggttcttggattctatactttgcataggtgttttgctgcatggtgtatgtgactcaaagccagagttcaacttcttcttcttctttccttttccggtcatccaaagattggagataaacctgagctttggctatcttcttgctggatacttttcctatatttgtggcttagccttggctccttacataacattttatcccatggccgccattgggtttatatcatgtgcttttaggatcatagagaagagaagtagggaaaagggggaaatgtaccatcaccgtaggaaacactctcataaacactaaagtgaaaatactcccactatacgatagtgccacattcagaatggttctgcaatagatgttctagttgacatgcctcaatttgtttgatgtgtaattttcattttcagaggagtagaatatcagcttgtgtatggctttaattctacaagtgattcaatcattatatttgtcgcaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="42442" stop="29069"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42143" g_stop="41976" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41975" i_stop="41804" i_length="172">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41803" g_stop="41458" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="514" r_length="346" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41457" i_stop="40063" i_length="1395">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="40062" g_stop="39817" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="515" r_stop="760" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39816" i_stop="38999" i_length="818">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38998" g_stop="38808" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="761" r_stop="951" r_length="191" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="38807" i_stop="38726" i_length="82">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="38725" g_stop="38554" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="952" r_stop="1123" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="38553" i_stop="36775" i_length="1779">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="36774" g_stop="36637" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1124" r_stop="1261" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="36636" i_stop="36558" i_length="79">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="36557" g_stop="36380" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1262" r_stop="1439" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="36379" i_stop="36240" i_length="140">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="36239" g_stop="36094" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1440" r_stop="1585" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="36093" i_stop="35885" i_length="209">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="35884" g_stop="35708" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1586" r_stop="1762" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="35707" i_stop="35608" i_length="100">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="35607" g_stop="35497" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1763" r_stop="1873" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="35496" i_stop="35071" i_length="426">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="35070" g_stop="34951" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="1874" r_stop="1993" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="34950" i_stop="34854" i_length="97">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="34853" g_stop="34697" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="1994" r_stop="2150" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="34696" i_stop="34172" i_length="525">
            <donor d_prob="0.831" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="34171" g_stop="34008" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="2151" r_stop="2314" r_length="164" r_score="0.994"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="34007" i_stop="33904" i_length="104">
            <donor d_prob="0.820" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="33903" g_stop="33817" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="2315" r_stop="2401" r_length="87" r_score="0.989"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="33816" i_stop="31680" i_length="2137">
            <donor d_prob="0.886" d_score="0.98"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="31679" g_stop="31351" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="2402" r_stop="2730" r_length="329" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="31350" i_stop="31004" i_length="347">
            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="31003" g_stop="30946" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="2731" r_stop="2788" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="30945" i_stop="30678" i_length="268">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.258" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="30677" g_stop="30617" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="2789" r_stop="2849" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="17">
          <gDNA_intron_boundary i_start="30616" i_stop="30373" i_length="244">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="18">
          <gDNA_exon_boundary g_start="30372" g_stop="30099" g_length="274"/>
          <reference_exon_boundary r_type="cDNA" r_start="2850" r_stop="3123" r_length="274" r_score="1.000"/>
        </exon>
        <intron i_serial="18">
          <gDNA_intron_boundary i_start="30098" i_stop="29883" i_length="216">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="19">
          <gDNA_exon_boundary g_start="29882" g_stop="29370" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="3124" r_stop="3636" r_length="513" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="3637" polyA_stop="3647"/>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E746474" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>3636</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E746474" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42143" e_stop="41976"/>
          <exon e_start="41803" e_stop="41458"/>
          <exon e_start="40062" e_stop="39817"/>
          <exon e_start="38998" e_stop="38808"/>
          <exon e_start="38725" e_stop="38554"/>
          <exon e_start="36774" e_stop="36637"/>
          <exon e_start="36557" e_stop="36380"/>
          <exon e_start="36239" e_stop="36094"/>
          <exon e_start="35884" e_stop="35708"/>
          <exon e_start="35607" e_stop="35497"/>
          <exon e_start="35070" e_stop="34951"/>
          <exon e_start="34853" e_stop="34697"/>
          <exon e_start="34171" e_stop="34008"/>
          <exon e_start="33903" e_stop="33817"/>
          <exon e_start="31679" e_stop="31351"/>
          <exon e_start="31003" e_stop="30946"/>
          <exon e_start="30677" e_stop="30617"/>
          <exon e_start="30372" e_stop="30099"/>
          <exon e_start="29882" e_stop="29370"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATACACTGAGACGTCTCACTACGCCTTTCCTAAAATTGGGATTCATTCCCTTTTCTGGAAAGGCACACACTTATCTTTACTTTCTTGATTCTTGATTCTTGTCGCCTTCAACCAAAGATTTGTCAAAATTCCTATTATCATTGCAACAACCATAGATCTCCAATCAGGTACACCTTTCCAACTAAAGAATGTGTTTTGTTTTCATTGCACTATAGGATGTTTCAGTGCACATATTCTGTTTGTAGATTGTTCCCAAAGAAAACAGAATCCAACTTCCATTTTTCACTTCTTGGGTGAAAGATCTATGTACTGAGCGTTACATCTTGTGTAATTTGGTAGGTGGGTTATTGAACCGATCAAGATGAAGTGGATGGGCGGTAGCGTGAGCCAAAACATGCAAGGCTGCAGAGCGAAATTTAGAGTGATTGCATTGGTTCTACTTGCTATATCTATAGGTTTAGCTGGTCTTTATAGCATGCTAAAACCCATATCTAATGGATGTACCATGACATACATGTATCCTACTTATATCCCTGTACCTACACCGAAAAATCTGTCGTCCATGAAGTATGGATTACATCTATACCATGAAGGATGGAGAAAGATTAATTTCAGCGATCATCTTAAGACACTTAGTGGAGTTCCTGTTCTTTTTATCCCTGGCAATGGTGGAAGCTACAAACAGGCAAGTTTCTTAACTATGTCCTCAAATCTTTCGTAACAGAATTGCCATCATATGTCTCTTCAATTTTCTCAAATCTTCCATCTATGAATGTATTAATGCATGACTAATTCCAATTAGATGGAACGAGGTACCACATGTGTGCGTGCATTTAGTCATGACAGATGAGCAGATACAGAACTTAAGATGTTGCTGACTGCACAGAGAAACAGTCTTATATCCTTGAAACTGTTCTCTATATTCTTTGGTACCCTGAAAGCATAACACAAGTTCCCTCTGGTTAATTTATGCTAAAACTATTTGCTTGCTCTGTGACTGCATTAAATTAAACTGTCAGAGGTAGTAATTAATGAAGAGTAAGTAAATGGTATTTATGTGTGAACCAATTAAATATTCTTGGCTTACGTAGAATGGTACGATTAAAAGATTGAAATGGTGGAAATAACCTTTAAGTTCTGGATCTTCCCTTTCTGTAGGGGGCTTACATCAATCAATTGATTCTAAGATAAGCACCGAAAGTGCTTAATAGCCAAAATCAAGGCCGTGTTTCTACTTCTAAGCACTTCTGGTTTGACCAACTTTTATACTATTTTTTGTTTTTGATTATCAAGTTATTTCTTTTTTTGGTTTGACCTACATTACCTAATAGTGTTTGTTATTCTGGAATTACACTTTTCGAAACAAAGCCCCTAACCAGCTGTTTGTTCATTTCCGCCTTTCATTTTTCTCTCAACTGTGCTTACTTCCTAGCCATTTTTCATCTGTCACTCCAGTTATGATGAAATAATTTATATTTATTCAAATAGTTTAATCTAATCAATTTAAAACTTAATAGTGAATTGAGGCATAAATTAGTTTGTATTTGAATCAGTTTGAAATTAAGAATCTTGCAATAATCAACTTCTTTCAAGCGTGAGGCATTGAAGTTGTTTTAACCGAAAAAGTGTTTGATACCAAACATATCAGCGACTTACCATCAGTTTTCAGCACTTCTACCAAAAACCGTTTCTGCATATTAATACCAACTTCAGCACTTATATGTGCTTTTTTAACACTTGACAAAGGGGTTCCAAACCAAGAGCTTTTCAAGGAGTGTATTTTGGAAATCGGGTTGCTTCAATCAGACAAGTTGCTGTTCTTCTACCCATTTTAGACAAACCTGATTCAGAATCATCTCTTTTACGGATGTTATAAAAAAAGTTTACTTGCTGTGACAACTGTTGATTGATAGACTTATTCTAGAGAAGGTGGCGTGGAGGTTGCACTCTTCCTTTTAGCTAGAGATTATTTATTAACTGCTTGTTATGTGAAGGTATGTGCATCATAATATGAGTGCAAGACATGTTACTGAAATTATTGTTCTTGTTTGTTCCTAATCCTTTTCAAATGCTTTTACAGGTGAGATCTGTGGCTGCAGAATCTGATAGAGCTTATCAAGGAGGTCCTCTTGAGCACAGCTTTTACCAAGAAGCCTCTCTAACTCTCGGAGAGGGAGTAGATTTTGATGTCACCAGCACTCCTTTACCCTATCAATACACATCCATGCTTGACTGGTTTGCTGTGGATCTTGAAGGTGAACATTCTGCAATGGATGGTCGAATTCTTGAAGAACACACAGATTATGTTGTATATGCCATTCACAGGGTATAAAGTTTCTTACTCAAGAAAAAATATCTCTTTTTTGACATTTGACTGATGCAACGTGATGTCAATCTTTATTGCGTAATTCCATAGCTAGTCCAATATACATAGAGATGAATACATGATGTTTTCCGGGAAAAGGGAGAAGGTAAAAAGTAAAAATTTCAAGTTGATATGGTTCACCTTAAAAAATTCGTTGACAATAGACTGGACCATTTGATGTTATGACAGTGAAAAACTTCTAGAACTTCTTAAAGGATATCTGCAAGTGAGAGGGTTCTGGTACTCCAGTCTTACAGCAAGTAGGGGCTTATGTTACACATAGACCGCCAGAGAGTAAGGCAAGACATCAAGAAGAATTTCAAGTGATGGAGTGCTTTATTTGAGTTTATTCTTTATCAATTCGAAGTTTAAAACTCGCTCACTTGATTTAATTTTGCCAACTTTCAGAAAGCATTTAACATTTTCTACTCTTTTTGGATCTAATCCAGACCTGTCATATGCATGGTTAAAAGAAATGGGTAGGCCAGGTGCACAAAGCATCCTACGTTAGCAGGGTCCGTGGTGGGCTGCACCCCAAGGGGTTTGATGTAGACAACCTACCGTATCATATGCATGGTTATTGTCATTAAATAAGTTTGTCTCCGTGGTGGGCTACACCCCAAGGGGTTTGATGTAGACAACCTACCCTATCATATGCATGGTTATACTGCTCTACATTTTATATTCCTCTCTTCTTCCTTCCCCTCCACTCTCTTCGTCTTATTTTATGTGATGTAATTTTCATGTCTGTGTTTCTATTTACATCTTCCTACTCTTAGATATTGGATCATTATAAAGAGTCCCACGATGCACGAGTTAAGGAAGGTGCTGCTGTGTCTAGGAGTCCTCCGAGAAGTGTGATATTGGTTGGTCATTCCATGGGTGGTTTTGTTGCTAGAGCTGCGATTGTCCACCCAGATTTAAGGAAATCTGCTGTTGAAACTGTTCTGACACTTTCGTCTCCACACCAGTAAGTTGCTCTACTCCTGGAAGCTATTATGTGGTTACAGTAATGCTATAAAATAACTATCACTTTTTGGTGCCTTTCCCAGGTCGCCTCCTCTGGCTCTGCAGCCATCACTTGGTCAGTATTATGCACGAGTAAATCACGAATGGAGGAAAGGATACGAGGTCCAAACTTCTCGTTCAGGGCATCATCTGTCTGATCCACTACTCTCTCATGTTGTTGTTGTCTCCATTTCTGGTGGTTATCATGATTACCAGGTACTTATTCTATTTGCTTTTACATGTTCAAAGTTGAAAATCTGAATTATAGTTGACAACCAAAAATGTAAGCCTTATAATTGGTATCATTTCTTTTCATTCTTTCCTTTCCAGTAGGAATCTTCAACTCTCCGATCCAATCAAATTATCTTCTTCAAGTGAATGATTGTTTGTTACTTTTAGAGGAAACTGGATAAACATAATATACTTACGTTTCATGGGTTTTATTATTTTCCTTTTTTATCTCAATTTTTTTTATGTTCATGGTTACTTAGTAACTGTCGTGCTGTTTCTGTTAAATGCACTGCTCTATTAGCTAAAAGAGGGAAGTAGCTCTAAAACTTATTCTTTCTCCATCTTGCGTAGATTCTTAATCTTTTGAAGGATTCTGGGTTTGCCTACTTTATCCTTTGCCTTGGTCTCTATATAACTGTAAAAGTATACTTTATTTCAATGGTCAGGCCCTTATATAATGTTTAGTATACTTTATTTCAATCGTCAGGCTCTTATATTATGATTTGAGTATACTTTGTTTCAATCTTGAGGTTCTTATATAATGATTCAAGTGTACTTTATTAAAAGGCGAAATGGTCTGGTGAACCCTTATACTTGTATCGGTTTATATTCTGGACCCTCCTACTTAATCTTTTGTCAACTGAATCCTTAGACTCAATTAAAACGAGACTTTCAAGCCCCTCCAACCATATGTGTAGCTCACTCTCTTTTACATAAATGACATATCATATCCACGTCAATTATATATTTGCCATGTCATATGCCACATCAAATATTATAAACAAAAATGTTAAATAATAAATTTTTTATTTAAAAAATAAAATAAAATAGTTACATTTCTCAACTTTCATTCACTTCCACAACCACCATTAGAGATCTTTCACCACCATCTTCATTTCTTTAATCCTTTCTTCTTCGAAAATGGCGCCACAAGGACACCGAAATTCGTATTATTTCAGAAGAAAAAGGAGTTCTGAACCTCTGTTTTTTTGCAATGCATCAACAAATTACTACTCCCAAATCAATAACAATTTAGTATCCATTTTCTTAGAAAAATGTCAGTAAAACAAAGTACTAGCATTGATTGTCGATCGCAACAGAGTACTAGTATTGATTCCATCACAAAAGAAAAAAAGTTTAGTAGACATCAACATGTAAAGAAGAGAATCCAGATCTAATCCTCTACAGCTGAACTTCTTAATCATTTTCTTCCTTGGTTGTTGTTTGCAACATCGACCAACTTCAACTTTCGCCATGGATTGGGAACGGACTAGGACTTAAGAGAGTGACAACGGCTAGGGTTTTGAGGACGATGGGTTAGGGACGATGACGGAAGGAGGCTGAAGCTTTAATTTGTTTTTGCTTTTTATGTTTATTATTTAATCAATTTTCCAGAACAAATTTATTACTCTCACTCTCTTTTTAAAGCGTTTGACACCACACTCTATATTGAGTTGGCAAAAATTGCCACATAAGTTCGGCCAATGGTCAGAAGGTTTTAAAAGTTCCATTTTAATCGAGTTTAAGGGCTCAGTTGACAAAAGATTAAATATAAGGGTGTGAAATACAAACGCATACAAGTATAAGGGTCCATCAGACCATTTCGCTTATTAAAATGGGCCACATTTTATCCCCTGCTGCTGTCCGTGTACTTTGTTCTTTGGCTGTTGTTCTTTCTCTTGCCTCACCAGTTCCCTTCATGTGAACAGTTATGCTTTGCTTCACTAAATATGTAGCATTAGCTTCTATAACTTTTCATTTTAGGTCCGATCAAATTTACAATCACTTGATGGTATTGTGCCTCCTACCCATGGCTTTATGATTAGTAGCACAAGCATGAAAAATGTGTGGTTGTCAATGGAGCACCAGGTTATCTTGTGGTGTAATCAGCTTGTTGTCCAAGTAAGTCAATTTTTTCCTGAGAATCTCCAGTTAAATTTGTAGCCAAATAGCTCTGAATTTCATATATCAACTTTTTCAGGTATCACATACTCTTCTTAGTCTGGTAGACCAGGGGACTGGACAACCTATATCTGATGTTCGAAAAAGGCTGGCAATCTTCACAAAAATGCTTCATAGTGGGATACCTCCAAATTTTAATTGGTTAAAGCAGTCACAGCTGCCTCATATACCAATTGAAGATGGAGAAGCTAAATCTGGTATTTTCACTCCTCAACTCTCTGTATTAAAGTGATGATCCTTATATAGTGTTAAAAGTATACGGAAATGCATTTTCATGCTAACTGTGTTCTTGTATATGGCACCAATTTGGTGTGCTGAAAGGTGAATTGTGGTGCAGGATCTCAAGCACATAGAGTGTATTCTTGCCCTAATAACATCCATTGGAGTGATGATGCACTTGAAAGAGATTTATACATCGAGACAACCACAGTTACAGTTTTAGCGATGGACGGGAGAAGGCGGTGGTTGGACATTGAGAAGTTGGTCAGCTTCCTTTATTTTTTATAAAAAGTTACATTGTAGATATCTTTCATAGCGTGCTTGCTTGCTTTGCTTTTGTCCTCCTATTTTCAAGAAACAAATGTTTGCACTCTTCTGCGAATAAGGTCTTTGCTTTAAGTTTGAATACCAGTTACCTAGAATGTGTAAATGCTATTTTTCCAGCTTATAACTTATCTTACTTGCATATGCAGGGGTCTAACGGCAAAAACCATTTTGTTTTTGTCACAAATCTTTCTCCATGTTCCGGTGTACGACTGCACCTTTGGCCTGAGAAAGGAACTGAAGTTTCCACTTTACCGATCAATAAACGGGTTTTAGAAGTTACATCAAAGATGGTGCAAATTCCATCTGGACCAGCTCCGAGGCAGGTACTTAGTCGTGTGCACTGTCTGCCGAATGTTCTAAAATAAGATGTTATATGAGCTAGTTTGATTTAAATTCTTCTTAAAGGTGCTGTTTTTGCAATAGGTTGAACCAGGTACTCAGACTGAGCAGGCACCTCCCTCTGCTGTATTTTGGTTGCACCCAGAGGATATGCGTGGTTTCAGATATCTGACCATCTCAGTGGCACCTCGCATGGTACTTGTTCACAGGGTTCTCAAATTTGCTTTAGCTTCTTTTTAGTCATGATACCTGGTTTCTTGGGAGTTCTTTGTAATAGTTCGTATGTGTTAGTGTAATTACCCATTAAATCTTTTATAATACGAGGTAGGACTTTAGTTTCTATACTTAATCAATAAAAGATAAAAGATCTCTGGGAAGGAACTTTTCTTTCTCAATGTGTTTTAAATAGAAAATCAAATCTTTCTTCTGCCTTTGATGGTAGAGTGGCCGATAGATCCTCATTGCTGTACTTCATATATATTCATGAGCTTTTCTAGTGCCACAAAGCAAATTTGGTCTTGGAATAGAATTTCAGATGGAAACTTCTGCTTCTCTTCGTGTTGAGTATTATATGTGGTTAGATCCTGGCTTTTCATCTCATGATGACTTTATGATTTTCAGGCTGTTTCAGGAAGACCTCCACCAGCCACTTCCATGGGAGTTGGGCAATTTTTTAAACCAGCAGACGGAGAAACAGCCTTATCTTCTGGGTCGTTGATTCGGTCTATGTTTTCTTTACAGGTTTGTGGTGGGTGGAGCTTACTTAACTAGAGAGGATGAAAAAAAGTTTGAGCTATATATACCTTTTAATACATTATTTTTCGGTTCAAATTTGCAGGAGATGACGTTGAATGAGGATCATCCTCTTGCACTCAATCTGTCTTTCTCTGTTAGCTTGGGTCTCATGCCTGTGACGTTATCTGTCAAAACAACTGGTTGTGGAATAAGAAAGTCAGAGTTCACTGCTGATGAAACTGGAGAGATGGAAATTGACAGTAAGGGTTTCTCCTATTTAACAAATAAGGCATCTTGTACTGTTTCTATTAATTAGTAAAGAGTTTCGTACTTTTTTACTTGTTATTGTGTTACTTGCCAACATCTTTCACCAATCCCTCCAAATTTTATAAATCTTGGTGGAATTGATGTTTGAGGAATTTCTTGGAGGGAATTTGAAGTGTTACTTCCATATCCCTTTTGCTAAGTAAATGCAATACAAATTTAAGAAGCTTTATGTTTACTCACCTTCCTTTAACTGCTATTCAATCTGCCCCATCAAAGGGATCTTTAGATAGAAGTAGTTGTATAAAAACAATAACTGGTAAATCACATGTATCATGCACACCTTCAACTTGCCACCTTTGTATGTAACTGCAGAAAATGTAACCAAGTAAAAAGTAACTTCTTTAGTTCATTCAGCTGAGTATTAATCTTACCAGATAAATGTTCCATATATAAGATTGAATGTCGCAGTTTTTGTTATTTATTTGTGGTGCTAATGTAACTTATTCTTTTGGATGTAGGGCTGTGTAAACTTCGCTGTTTCCCTCCTGTAGCAATTGCTTGGGATTTCACGTCTGGTCTTCATATTTTTCCTAATCTGTTCTCAGAAACAATTCTTGTGGATTCCTCTCCAGCACTCTGGACTTCCAGCCTAGGGTCAGAAAAGACCAACGTTATATTGCTGGTATAATAACAGACCCCTTAGTTTCTCGTTCGGTTAGAAAGTTGAAAAACTGCTGCTCTGTTTCTTTAGCTCTTACATGACTTTGTTTTCCCTCTTATGTGCAGATTGATCCACATTGTTCGTACAAAACAAGTATTGGTGTTAATGTAACCTCTGCAGCTAAAAGATTTTCGCTTTTATATTTCCCACAGGTGAATGCAGTTTTAAACCAATCTTATATCTCAAAGTTTTGTATACCATGCAGTCTGAGACTTTGCTTTCATGTGTATATTTCTTACATTTCACTCATAGGTTAGCATCAAACCGTTATAGGATACTGATGGTGGCACAGAATCTCCCATTTGATTTTGATTCCCAACTATTAAAATATTTCATGTTATTGATATTCTTCCATGTTCCATTCAGTTGGGATACATTCTACCATTATACCTCAGAACACCAGTCTTCATCACTTCACAATTCTTGCTGTCTGAGCTATATATAACTCCTTATATTAAGAAGTCCACATCGGTAGAGGGATGGGAATTTGGTCTTCCTTATATGGACTTGGACAAACCTCCCCTCATGAGCTAGCTTTTGGGGTTGGGTTAGGCCCAAGTGTCATATCTTTACACCTTATCAAGCCTACTTTTAGTGAATACCTTCATGCGAGAGTTACTGATGAAATGATTGGTACACCTTTTGCAAGTTTCAAGGTTTCAGATTTAGATTGTCAAGTTGTGACATGACCTTTCCTTATCAATCTAATATTTACCTGTGACATCCAGTGATAAATTTAATACTCACTCCACTGCAAATCATTTTTGTGGTACTCACTCTCAATACAATTAAATGGCTGGAGGTGCAATATACTTGAAAGAACTAATTTGCATACTTATAATGCCAAACTTGGAAAAGGAAACCACAGAATTCCGTACACACTACTAAGAAATGAATTCCCTTGTTTCCTTCATAATAAAGTTTGTTACAGTTATTTTCTTAGTCGAGGCCCAATTCAGTTGATGTCTAAGCAAGCTGCAAGCAAGTTGTTATGAAACATGTAAAGCTTCACAGAGTTTAGGATGCCTTCGATTTCTCATTCAAGAGTGATTTGTTTTCTGATCTCTTAAGGATTTTGTTGCATTCTAATTCCTTTATGAAGAAAGAATGAAGTCTGGTATTGTTGTAGGACCGGTTATTAAAAAAAAACTATTTTAGTAGGATCCTTCATCAAGCCTCACTGCCAAGCATGTAGCAAAAAACTTATTCTGAGTGAGTAAATGGAATAGAGTCATATATTCCTTTTCTTTGTATAATAAAGTTATACAAAAAATATATGAAGTTATATGATCAAAAATTATTCCTTTTCTTTGTATAATAAAGTTATATGATCATCAGAAGTCTGGTCCATGCATGTATCCGGACTAACAACAACTACACCTCAATCCTAAACAACTTGGGGTCGGCTATGTGAATTCTCAACTATTACATTTACGTTCAACTCATGTCATCATCATACAAATAAAAACAAAAACAAATTAATTATATATAAATGATAGTGATAATAGTAATAATATTTGAAACTCTCTAACAAGAATCCTTTAACCCATTAGTAGATATCGCCTAGATATTTTTCTTCCATTGTGCCCTATATTTTGTAGTAAAGTCTGTATTGATCCAAGAATTCTTAGGTCTTTTGAGACAACATCCTTCAATGTGATTTTAGGTCAACCTCATCCCCTTTTTTACACCATCTCTCACCATGGCTTCACACCTATGGATTGGTCCATCTGTAGGTCTATGCAGGACATGACCAAACCACCTCAAGCGACCTTGTTTTATTTTATCCTCAATCCGTGCTACTTGCACCTTCTGACAAATATGGTCAATTATAATCTTATTTAATCTTGTATGATCACACATCCATCTTAGCATCCACATCTCTGCAATAGTCAACTTGTGGATATGTTTGACTTTAGTGACCCAACATTTACTACCATATCCTTCTAGCACATAACACCCAGTAGCAGTTCTCCTGTTCAACCATTCAGTTTCGATTCGAGAAATTACATCTTCATGTATCAGTCCATTCGTTGAAACAACAAGCCTAAATATCTAAGTTGGTTGCATGTTTCCTTACTGATATATCATATATCAAAATATCATCAATGGTTCAATAGTTCTGTGTCCGTACTTTTGTACTGAATCAGGTTTGTTCTTTTGTTCAATGGCTGTAGTTCTTATAATTGGTGCTGATCTTTTTACCATGCTCCTTGGTGTAGGTATTGCTTTTTTCTTCATTTTCTGATTATTGGGTTCATTGTTATTTGCTGTCATGGACCTGTGCAGATTACTGGTTTTGCAATTGCTGTTGTCTTTTTTGCTTTAATGCGGCAAGCACGACAATGGGAGCTTGACCTGCCTATACCTTCACTCCTTACAGCAGTTGAATCAAATTTGCGGATGCCATTGCCCTTTCTATGTTTGGCCCTGCTACCTATCTTATTTGCTCTTGTACTTTCCTGCCTCATTTCTCTACCTCTTCCTCCAGCCATAAGTTTCATCTCTGTCTCAACAATCTGTTACTTATGTGCAAATGGAGTGGTGGCTGTGCTGATATCAGCCTCCCAGTTGTTGTTCTACGTTAGTGCATCTTTACATGTATTCATCAAGAAACGGTTAGTTTACTCTCTCTTGAATATATCTACCACATTTATGTTACGTAAGATTTTCATACAAGTGACTGATATCATTTATTAGTCAATTTACGGACCAAAGTTGCATGTGCTGGTGAAATTCAGTCTTAATCTCAAGAGAAATTTCTAGTCCCCCTACTTCCCAACTGTCCATAAACAATTAAAATACTCTCACTCAAGGAGTGCGCTGCAGACCTAAATAAATTAATAAAAGTGACTACTCTATAACAGTGTTAAGGTTTTTCTTAAGGTACCACATAATTTAACAGAAACCGTTATGGCAAGAAATTCATTACCAACTGAGCTAATGGTAATATAATCTTTTGCAGGTCGCAAACACGGGAACATAACTTTTCTCCTCTTTTCACTGCCTTCCTGTCATCCAAGGTTAGTTTAATTGTGGCATTGTAGCTTGCAAAAGCATAAGTTTGTAAAAGGCTGGATTTGTACATATATTTCGGAACTGAAATTGAATGCATCTTTTGTTCCTGGTCCTCTAATCTTAGTAAATGTCGAAATTGAATGCATCTTGCATTCCTTGTTCTCTTAATAAAAAAATTTTACTTATTGAAACAGGTAGTCAGGATCGTGAGATTCAATCCATTGTTTGATATGACACTTGTCTCTTTGACCCTAATGTGCTTCGCTCATCCAGCATTGGGTCTTCTTTTGCTGGTCATTTCTCATGCTGTGTGCTCCCACAATTCCCTGTCCAGGTACATCCCTAACTAGTACCCTTTCTCCACTCTTCTGTAGTAGTCTTATGCTGTATATTAGAATTGAGGGCCATCACATGACCATTGATTGATAGTGTGTGATTCCTAGCCGAATTCTGACCATTCCGAACTTCTGAATAGATTAAACATTTGACATTTGATATTTAGTTTTTGGCTCTGCTGATATTTGATATTTTGTTATGACAAATGTAGTCTAAAACCAATTTTTCTCGTCTGTAAACAGTTTTTTGATGGCTTCATTTCACAGCCGTACCCAGACTAAGGAGTTCATAGAATCTGGGAACAGACGTCAGAGTGGATCGAAGCAGTCCATACCCGAGCATGATGGTGAAATCAACACGCATGTTCCTCAGAAGGAGAGTAATTCCAGTAGTCTGGACTCAGTAAAAAGCTATGGTGACACCCAATTAGAGATCTTCAATCATCGGCATGGCTTGCTTGTATTACACTTGCTTGCAATGCTGATGTTTGTCCCTTCATTTATTGCGTGGATCCAGGTATTCCTTTTCTTTCTTTAGGACCAAGAGGATTTCACTGCCTTGTGTTCATATTTTGGAATCTCGCTTACTTTGCACTGATAAATTGATAGAGCAAATGCTCTCAATAGTCTTCTTAATGAAATAATATTTGGGTTTTTGTGGACATTGTTGATTGCTCGAAATAATTAAAAGTAGCATTAACATTATTCTTTTTTGGTATATGTTTGCACACAGAGAATGGGGATCGGTCATAGCTTGCCGTGGTTCTTGGATTCTATACTTTGCATAGGTGTTTTGCTGCATGGTGTATGTGACTCAAAGCCAGAGTTCAACTTCTTCTTCTTCTTTCCTTTTCCGGTCATCCAAAGATTGGAGATAAACCTGAGCTTTGGCTATCTTCTTGCTGGATACTTTTCCTATATTTGTGGCTTAGCCTTGGCTCCTTACATAACATTTTATCCCATGGCCGCCATTGGGTTTATATCATGTGCTTTTAGGATCATAGAGAAGAGAAGTAGGGAAAAGGGGGAAATGTACCATCACCGTAGGAAACACTCTCATAAACACTAAAGTGAAAATACTCCCACTATACGATAGTGCCACATTCAGAATGGTTCTGCAATAGATGTTCTAGTTGACATGCCTCAATTTGTTTGATGTGTAATTTTCATTTTCAGAGGAGTAGAATATCAGCTTGTGTATGGCTTTAATTCTACAAGTGATTCAATCATTATATTTGTCGCAAAA</genome_strand>
        <mrna_strand>GATACACTGAGACGTCTCACTACGCCTTTCCTAAAATTGGGATTCATTCCCTTTTCTGGAAAGGCACACACTTATCTTTACTTTCTTGATTCTTGATTCTTGTCGCCTTCAACCAAAGATTTGTCAAAATTCCTATTATCATTGCAACAACCATAGATCTCCAATCAG............................................................................................................................................................................GTGGGTTATTGAACCGATCAAGATGAAGTGGATGGGCGGTAGCGTGAGCCAAAACATGCAAGGCTGCAGAGCGAAATTTAGAGTGATTGCATTGGTTCTACTTGCTATATCTATAGGTTTAGCTGGTCTTTATAGCATGCTAAAACCCATATCTAATGGATGTACCATGACATACATGTATCCTACTTATATCCCTGTACCTACACCGAAAAATCTGTCGTCCATGAAGTATGGATTACATCTATACCATGAAGGATGGAGAAAGATTAATTTCAGCGATCATCTTAAGACACTTAGTGGAGTTCCTGTTCTTTTTATCCCTGGCAATGGTGGAAGCTACAAACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGATCTGTGGCTGCAGAATCTGATAGAGCTTATCAAGGAGGTCCTCTTGAGCACAGCTTTTACCAAGAAGCCTCTCTAACTCTCGGAGAGGGAGTAGATTTTGATGTCACCAGCACTCCTTTACCCTATCAATACACATCCATGCTTGACTGGTTTGCTGTGGATCTTGAAGGTGAACATTCTGCAATGGATGGTCGAATTCTTGAAGAACACACAGATTATGTTGTATATGCCATTCACAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGGATCATTATAAAGAGTCCCACGATGCACGAGTTAAGGAAGGTGCTGCTGTGTCTAGGAGTCCTCCGAGAAGTGTGATATTGGTTGGTCATTCCATGGGTGGTTTTGTTGCTAGAGCTGCGATTGTCCACCCAGATTTAAGGAAATCTGCTGTTGAAACTGTTCTGACACTTTCGTCTCCACACCA..................................................................................GTCGCCTCCTCTGGCTCTGCAGCCATCACTTGGTCAGTATTATGCACGAGTAAATCACGAATGGAGGAAAGGATACGAGGTCCAAACTTCTCGTTCAGGGCATCATCTGTCTGATCCACTACTCTCTCATGTTGTTGTTGTCTCCATTTCTGGTGGTTATCATGATTACCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCGATCAAATTTACAATCACTTGATGGTATTGTGCCTCCTACCCATGGCTTTATGATTAGTAGCACAAGCATGAAAAATGTGTGGTTGTCAATGGAGCACCAGGTTATCTTGTGGTGTAATCAGCTTGTTGTCCAA...............................................................................GTATCACATACTCTTCTTAGTCTGGTAGACCAGGGGACTGGACAACCTATATCTGATGTTCGAAAAAGGCTGGCAATCTTCACAAAAATGCTTCATAGTGGGATACCTCCAAATTTTAATTGGTTAAAGCAGTCACAGCTGCCTCATATACCAATTGAAGATGGAGAAGCTAAATCTG............................................................................................................................................GATCTCAAGCACATAGAGTGTATTCTTGCCCTAATAACATCCATTGGAGTGATGATGCACTTGAAAGAGATTTATACATCGAGACAACCACAGTTACAGTTTTAGCGATGGACGGGAGAAGGCGGTGGTTGGACATTGAGAAGTTG.................................................................................................................................................................................................................GGGTCTAACGGCAAAAACCATTTTGTTTTTGTCACAAATCTTTCTCCATGTTCCGGTGTACGACTGCACCTTTGGCCTGAGAAAGGAACTGAAGTTTCCACTTTACCGATCAATAAACGGGTTTTAGAAGTTACATCAAAGATGGTGCAAATTCCATCTGGACCAGCTCCGAGGCAG....................................................................................................GTTGAACCAGGTACTCAGACTGAGCAGGCACCTCCCTCTGCTGTATTTTGGTTGCACCCAGAGGATATGCGTGGTTTCAGATATCTGACCATCTCAGTGGCACCTCGCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTTCAGGAAGACCTCCACCAGCCACTTCCATGGGAGTTGGGCAATTTTTTAAACCAGCAGACGGAGAAACAGCCTTATCTTCTGGGTCGTTGATTCGGTCTATGTTTTCTTTACAG.................................................................................................GAGATGACGTTGAATGAGGATCATCCTCTTGCACTCAATCTGTCTTTCTCTGTTAGCTTGGGTCTCATGCCTGTGACGTTATCTGTCAAAACAACTGGTTGTGGAATAAGAAAGTCAGAGTTCACTGCTGATGAAACTGGAGAGATGGAAATTGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGTGTAAACTTCGCTGTTTCCCTCCTGTAGCAATTGCTTGGGATTTCACGTCCGGTCTTCATATTTTTCCTAATCTGTTCTCAGAAACAATTCTTGTGGATTCCTCTCCAGCACTCTGGACTTCCAGCCTAGGGTCAGAAAAGACCAACGTTATATTGCTG........................................................................................................ATTGATCCACATTGTTCGTACAAAACAAGTATTGGTGTTAATGTAACCTCTGCAGCTAAGAGATTTTCGCTTTTATATTTCCCACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACTGGTTTTGCAATTGCTGTTGTCTTTTTTGCTTTAATGCGGCAAGCACGACAATGGGAGCTTGACCTGCCTATACCTTCACTCCTTACAGCAGTTGAATCAAATTTGCGGATGCCATTGCCCTTTCTATGTTTGGCCCTGCTACCTATCTTATTTGCTCTTGTACTTTCCTGCCTCATTTCTCTACCTCTTCCTCCAGCCATAAGTTTCATCTCTGTCTCAACAATCTGTTACTTATGTGCAAATGGAGTGGTGGCTGTGCTGATATCAGCCTCCCAGTTGTTGTTCTACGTTAGTGCATCTTTACATGTATTCATCAAGAAACG...........................................................................................................................................................................................................................................................................................................................................................GTCGCAAACACGGGAACATAACTTTTCTCCTCTTTTCACTGCCTTCCTGTCATCCAAG............................................................................................................................................................................................................................................................................CATTGGGTCTTCTTTTGCTGGTCATTTCTCATGCTGTGTGCTCCCACAATTCCCTGTCCAG....................................................................................................................................................................................................................................................TTTTTTGATGGCTTCATTTCACAGCCGTACCCAGACTAAGGAGTTCATAGAATCTGGGAACAGACGTCAGAGTGGATCGAAGCAGTCCATACCCGAGCATGATGGTGAAATCAACACGCATGTTCCTCAGAAGGAGAGTAATTCCAGTAGTCTGGACTCAGTAAAAAGCTATGGTGACACCCAATTAGAGATCTTCAATCATCGGCATGGCTTGCTTGTATTACACTTGCTTGCAATGCTGATGTTTGTCCCTTCATTTATTGCGTGGATCCAG........................................................................................................................................................................................................................AGAATGGGGATCGGTCATAGCTTGCCGTGGTTCTTGGATTCTATACTTTGCATAGGTGTTTTGCTGCATGGTGTATGTGACTCAAAGCCAGAGTTCAACTTCTTCTTCTTCTTTCCTTTTCCGGTCATCCAAAGATTGGAGATAAACCTGAGCTTTGGCTATCTTCTTGCTGGATACTTTTCCTATATTTGTGGCTTAGCCTTGGCTCCTTACATAACATTTTATCCCATGGCCGCCATTGGGTTTATATCATGTGCTTTTAGGATCATAGAGAAGAGAAGTAGGGAAAAGGGGGAAATGTACCATCACCGTAGGAAACACTCTCATAAACACTAAAGTGAAAATACTCCCACTATACGATAGTGCCACATTCAGAATGGTTCTGCAATAGATGTTCTAGTTGACATGCCTCAATTTGTTTGATGTGTAATTTTCATTTTCAGAGGAGTAGAATATCAGCTTGTGTATGGCTTTAATTCTACAAGTGATTCAATCATTATATTTGTCGCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E435793" ref_strand="+" ref_description="SGN-E435793 [STM-62-G21]">
      <seq>gccctttctatgtttggccctgctgcctatcttatttgctctagtagtttcctgcctcatttctctacctcttcctccagccataagtttcttctctgtctcaacaatctgttacttatgtgcaaatggagtggtggctgtgctgatatctgcctcccaattgttattctacgttagtgcatctttacatgtattcatcaagaaacggtcgcaaacacgggaacataacttttcttctcttttcactgccttcctgtcatccaaggtagtcaggatcatgagattcaatccattatttgatatgacgcttgtctctttgaccctagtgtgcttcgctcatccagcattgggtcttcttttgctggtcatttctcatgctgtgtgctgccacaattccctgtccagttttttgatggcttcatttcacagccatacccagactaaggagttaatagaatctgggaacagacgtcagagtggatcggagcagttcataccccagtatgatggtgaaatcaactcgcatgttcctcagaaggagagtaattccagtagtctggactcagtaaaaagctatggtgacacccaattagagatcttcaatcatcggcatggcttgcttgtattacacttgcttgcaatgctgatgtttgtcccttcacttattgcgtggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="31857" stop="29803"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31557" g_stop="31351" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="207" r_length="207" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31350" i_stop="31004" i_length="347">
            <donor d_prob="0.939" d_score="0.96"/>
            <acceptor a_prob="0.914" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31003" g_stop="30946" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="265" r_length="58" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30945" i_stop="30757" i_length="189">
            <donor d_prob="0.976" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30756" g_stop="30617" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="405" r_length="140" r_score="0.964"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30616" i_stop="30373" i_length="244">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.978" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30372" g_stop="30103" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="675" r_length="270" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E435793" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>675</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E435793" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31557" e_stop="31351"/>
          <exon e_start="31003" e_stop="30946"/>
          <exon e_start="30756" e_stop="30617"/>
          <exon e_start="30372" e_stop="30103"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCTTTCTATGTTTGGCCCTGCTACCTATCTTATTTGCTCTTGTACTTTCCTGCCTCATTTCTCTACCTCTTCCTCCAGCCATAAGTTTCATCTCTGTCTCAACAATCTGTTACTTATGTGCAAATGGAGTGGTGGCTGTGCTGATATCAGCCTCCCAGTTGTTGTTCTACGTTAGTGCATCTTTACATGTATTCATCAAGAAACGGTTAGTTTACTCTCTCTTGAATATATCTACCACATTTATGTTACGTAAGATTTTCATACAAGTGACTGATATCATTTATTAGTCAATTTACGGACCAAAGTTGCATGTGCTGGTGAAATTCAGTCTTAATCTCAAGAGAAATTTCTAGTCCCCCTACTTCCCAACTGTCCATAAACAATTAAAATACTCTCACTCAAGGAGTGCGCTGCAGACCTAAATAAATTAATAAAAGTGACTACTCTATAACAGTGTTAAGGTTTTTCTTAAGGTACCACATAATTTAACAGAAACCGTTATGGCAAGAAATTCATTACCAACTGAGCTAATGGTAATATAATCTTTTGCAGGTCGCAAACACGGGAACATAACTTTTCTCCTCTTTTCACTGCCTTCCTGTCATCCAAGGTTAGTTTAATTGTGGCATTGTAGCTTGCAAAAGCATAAGTTTGTAAAAGGCTGGATTTGTACATATATTTCGGAACTGAAATTGAATGCATCTTTTGTTCCTGGTCCTCTAATCTTAGTAAATGTCGAAATTGAATGCATCTTGCATTCCTTGTTCTCTTAATAAAAAAATTTTACTTATTGAAACAGGTAGTCAGGATCGTGAGATTCAATCCATTGTTTGATATGACACTTGTCTCTTTGACCCTAATGTGCTTCGCTCATCCAGCATTGGGTCTTCTTTTGCTGGTCATTTCTCATGCTGTGTGCTCCCACAATTCCCTGTCCAGGTACATCCCTAACTAGTACCCTTTCTCCACTCTTCTGTAGTAGTCTTATGCTGTATATTAGAATTGAGGGCCATCACATGACCATTGATTGATAGTGTGTGATTCCTAGCCGAATTCTGACCATTCCGAACTTCTGAATAGATTAAACATTTGACATTTGATATTTAGTTTTTGGCTCTGCTGATATTTGATATTTTGTTATGACAAATGTAGTCTAAAACCAATTTTTCTCGTCTGTAAACAGTTTTTTGATGGCTTCATTTCACAGCCGTACCCAGACTAAGGAGTTCATAGAATCTGGGAACAGACGTCAGAGTGGATCGAAGCAGTCCATACCCGAGCATGATGGTGAAATCAACACGCATGTTCCTCAGAAGGAGAGTAATTCCAGTAGTCTGGACTCAGTAAAAAGCTATGGTGACACCCAATTAGAGATCTTCAATCATCGGCATGGCTTGCTTGTATTACACTTGCTTGCAATGCTGATGTTTGTCCCTTCATTTATTGCGTGGAT</genome_strand>
        <mrna_strand>GCCCTTTCTATGTTTGGCCCTGCTGCCTATCTTATTTGCTCTAGTAGTTTCCTGCCTCATTTCTCTACCTCTTCCTCCAGCCATAAGTTTCTTCTCTGTCTCAACAATCTGTTACTTATGTGCAAATGGAGTGGTGGCTGTGCTGATATCTGCCTCCCAATTGTTATTCTACGTTAGTGCATCTTTACATGTATTCATCAAGAAACG...........................................................................................................................................................................................................................................................................................................................................................GTCGCAAACACGGGAACATAACTTTTCTTCTCTTTTCACTGCCTTCCTGTCATCCAAG.............................................................................................................................................................................................GTAGTCAGGATCATGAGATTCAATCCATTATTTGATATGACGCTTGTCTCTTTGACCCTAGTGTGCTTCGCTCATCCAGCATTGGGTCTTCTTTTGCTGGTCATTTCTCATGCTGTGTGCTGCCACAATTCCCTGTCCAG....................................................................................................................................................................................................................................................TTTTTTGATGGCTTCATTTCACAGCCATACCCAGACTAAGGAGTTAATAGAATCTGGGAACAGACGTCAGAGTGGATCGGAGCAGTTCATACCCCAGTATGATGGTGAAATCAACTCGCATGTTCCTCAGAAGGAGAGTAATTCCAGTAGTCTGGACTCAGTAAAAAGCTATGGTGACACCCAATTAGAGATCTTCAATCATCGGCATGGCTTGCTTGTATTACACTTGCTTGCAATGCTGATGTTTGTCCCTTCACTTATTGCGTGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E459260" ref_strand="+" ref_description="SGN-E459260 [cPRO-27-G4]">
      <seq>gccctttctatgtttggccctgctgcctatcttatttgctctagtagtttcctgcctcatttctctacctcttcctccagccataagtttcttctctgtctcaacaatctgttacttatgtgcaaatggagtggtggctgtgctgatatctgcctcccaattgttattctacgttagtgcatctttacatgtattcatcaagaaacggtcgcaaacacgggaacataacttttcttctcttttcactgccttcctgtcatccaaggtagtcaggatcatgagattcaatccattatttgatatgacgcttgtctctttgaccctagtgtgcttcgctcatccagcattgggtcttcttttgctggtcatttctcatgctgtgtgctgccacaattccctgtccagttttttgatggcttcatttcacagccatacccagactaaggagttaatagaatctgggaacagacgtcagagtggatcggagcagttcataccccagtatgatggtgaaatcaactcgcatgttcctcagaaggagagtaattccagtagtctggactcagtaaaaaagctatggtgacacccaattagagatcttncatcatcggcatggcttgcttgtattacacttgcttgcaatgctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="31857" stop="29831"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31557" g_stop="31351" g_length="207"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="207" r_length="207" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31350" i_stop="31004" i_length="347">
            <donor d_prob="0.939" d_score="0.96"/>
            <acceptor a_prob="0.914" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31003" g_stop="30946" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="265" r_length="58" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30945" i_stop="30757" i_length="189">
            <donor d_prob="0.976" d_score="0.98"/>
            <acceptor a_prob="0.993" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30756" g_stop="30617" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="405" r_length="140" r_score="0.964"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30616" i_stop="30373" i_length="244">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.978" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30372" g_stop="30131" g_length="242"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="648" r_length="243" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E459260" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E459260" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="31557" e_stop="31351"/>
          <exon e_start="31003" e_stop="30946"/>
          <exon e_start="30756" e_stop="30617"/>
          <exon e_start="30372" e_stop="30131"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCTTTCTATGTTTGGCCCTGCTACCTATCTTATTTGCTCTTGTACTTTCCTGCCTCATTTCTCTACCTCTTCCTCCAGCCATAAGTTTCATCTCTGTCTCAACAATCTGTTACTTATGTGCAAATGGAGTGGTGGCTGTGCTGATATCAGCCTCCCAGTTGTTGTTCTACGTTAGTGCATCTTTACATGTATTCATCAAGAAACGGTTAGTTTACTCTCTCTTGAATATATCTACCACATTTATGTTACGTAAGATTTTCATACAAGTGACTGATATCATTTATTAGTCAATTTACGGACCAAAGTTGCATGTGCTGGTGAAATTCAGTCTTAATCTCAAGAGAAATTTCTAGTCCCCCTACTTCCCAACTGTCCATAAACAATTAAAATACTCTCACTCAAGGAGTGCGCTGCAGACCTAAATAAATTAATAAAAGTGACTACTCTATAACAGTGTTAAGGTTTTTCTTAAGGTACCACATAATTTAACAGAAACCGTTATGGCAAGAAATTCATTACCAACTGAGCTAATGGTAATATAATCTTTTGCAGGTCGCAAACACGGGAACATAACTTTTCTCCTCTTTTCACTGCCTTCCTGTCATCCAAGGTTAGTTTAATTGTGGCATTGTAGCTTGCAAAAGCATAAGTTTGTAAAAGGCTGGATTTGTACATATATTTCGGAACTGAAATTGAATGCATCTTTTGTTCCTGGTCCTCTAATCTTAGTAAATGTCGAAATTGAATGCATCTTGCATTCCTTGTTCTCTTAATAAAAAAATTTTACTTATTGAAACAGGTAGTCAGGATCGTGAGATTCAATCCATTGTTTGATATGACACTTGTCTCTTTGACCCTAATGTGCTTCGCTCATCCAGCATTGGGTCTTCTTTTGCTGGTCATTTCTCATGCTGTGTGCTCCCACAATTCCCTGTCCAGGTACATCCCTAACTAGTACCCTTTCTCCACTCTTCTGTAGTAGTCTTATGCTGTATATTAGAATTGAGGGCCATCACATGACCATTGATTGATAGTGTGTGATTCCTAGCCGAATTCTGACCATTCCGAACTTCTGAATAGATTAAACATTTGACATTTGATATTTAGTTTTTGGCTCTGCTGATATTTGATATTTTGTTATGACAAATGTAGTCTAAAACCAATTTTTCTCGTCTGTAAACAGTTTTTTGATGGCTTCATTTCACAGCCGTACCCAGACTAAGGAGTTCATAGAATCTGGGAACAGACGTCAGAGTGGATCGAAGCAGTCCATACCCGAGCATGATGGTGAAATCAACACGCATGTTCCTCAGAAGGAGAGTAATTCCAGTAGTCTGGACTCAGTA-AAAAGCTATGGTGACACCCAATTAGAGATCTTCAATCATCGGCATGGCTTGCTTGTATTACACTTGCTTGCAATGCTGA</genome_strand>
        <mrna_strand>GCCCTTTCTATGTTTGGCCCTGCTGCCTATCTTATTTGCTCTAGTAGTTTCCTGCCTCATTTCTCTACCTCTTCCTCCAGCCATAAGTTTCTTCTCTGTCTCAACAATCTGTTACTTATGTGCAAATGGAGTGGTGGCTGTGCTGATATCTGCCTCCCAATTGTTATTCTACGTTAGTGCATCTTTACATGTATTCATCAAGAAACG...........................................................................................................................................................................................................................................................................................................................................................GTCGCAAACACGGGAACATAACTTTTCTTCTCTTTTCACTGCCTTCCTGTCATCCAAG.............................................................................................................................................................................................GTAGTCAGGATCATGAGATTCAATCCATTATTTGATATGACGCTTGTCTCTTTGACCCTAGTGTGCTTCGCTCATCCAGCATTGGGTCTTCTTTTGCTGGTCATTTCTCATGCTGTGTGCTGCCACAATTCCCTGTCCAG....................................................................................................................................................................................................................................................TTTTTTGATGGCTTCATTTCACAGCCATACCCAGACTAAGGAGTTAATAGAATCTGGGAACAGACGTCAGAGTGGATCGGAGCAGTTCATACCCCAGTATGATGGTGAAATCAACTCGCATGTTCCTCAGAAGGAGAGTAATTCCAGTAGTCTGGACTCAGTAAAAAAGCTATGGTGACACCCAATTAGAGATCTTNCATCATCGGCATGGCTTGCTTGTATTACACTTGCTTGCAATGCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E735727" ref_strand="+" ref_description="SGN-E735727 [LC02DB09]">
      <seq>caaaaccattttgtttttgtcacaaatctttctccatgttccggtgtacgactgcacctttggcctgagaaaggaactgaagtttccactttaccgatcaataaacgggttttagaagttacatcaaagatggtgcaaattccatctggaccagctccgaggcaggttgaaccaggtactcagactgagcaggcacctccctctgctgtattttggttgcacccagaggatatgcgtggtttcagatatctgaccatctcagtggcacctcgcatggctgtttcaggaagacctccaccagccacttccatgggagttgggcaattttttaaaccagcagacggagaaacagccttatcttctgggtcgttgattcggtctatgttttctttacaggagatgacgttgaatgaggatcatcctcttgcactcaatctgtctttctctgttagcttgggtctcatgcctgtgacgttatctgtcaaaacaactggttgtggaataagaaagtcagagttcactgctgatgaaactggagagatggaaattgacaggctgtgtaaacttcgctgtttccctcctgtagcaattgcttgggatttcacgtctggtcttcatatttttcctaatctgttctcaaaaacaattcttgtggattcctctccagcactctggacttccagcctagggtcaaaaaagaccaacgttatattgctgattgatccacattgttcgtacaaaacaagtattggtgttaatgtaacctctgcagctaaaagattttcgcttttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="36171" stop="33528"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35872" g_stop="35708" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="165" r_length="165" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="35707" i_stop="35608" i_length="100">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35607" g_stop="35497" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="276" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="35496" i_stop="35071" i_length="426">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="35070" g_stop="34951" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="396" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="34950" i_stop="34854" i_length="97">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="34853" g_stop="34697" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="553" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="34696" i_stop="34172" i_length="525">
            <donor d_prob="0.831" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="34171" g_stop="34008" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="554" r_stop="717" r_length="164" r_score="0.988"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="34007" i_stop="33904" i_length="104">
            <donor d_prob="0.820" d_score="0.98"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="33903" g_stop="33828" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="718" r_stop="793" r_length="76" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E735727" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>793</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E735727" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35872" e_stop="35708"/>
          <exon e_start="35607" e_stop="35497"/>
          <exon e_start="35070" e_stop="34951"/>
          <exon e_start="34853" e_stop="34697"/>
          <exon e_start="34171" e_stop="34008"/>
          <exon e_start="33903" e_stop="33828"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACCATTTTGTTTTTGTCACAAATCTTTCTCCATGTTCCGGTGTACGACTGCACCTTTGGCCTGAGAAAGGAACTGAAGTTTCCACTTTACCGATCAATAAACGGGTTTTAGAAGTTACATCAAAGATGGTGCAAATTCCATCTGGACCAGCTCCGAGGCAGGTACTTAGTCGTGTGCACTGTCTGCCGAATGTTCTAAAATAAGATGTTATATGAGCTAGTTTGATTTAAATTCTTCTTAAAGGTGCTGTTTTTGCAATAGGTTGAACCAGGTACTCAGACTGAGCAGGCACCTCCCTCTGCTGTATTTTGGTTGCACCCAGAGGATATGCGTGGTTTCAGATATCTGACCATCTCAGTGGCACCTCGCATGGTACTTGTTCACAGGGTTCTCAAATTTGCTTTAGCTTCTTTTTAGTCATGATACCTGGTTTCTTGGGAGTTCTTTGTAATAGTTCGTATGTGTTAGTGTAATTACCCATTAAATCTTTTATAATACGAGGTAGGACTTTAGTTTCTATACTTAATCAATAAAAGATAAAAGATCTCTGGGAAGGAACTTTTCTTTCTCAATGTGTTTTAAATAGAAAATCAAATCTTTCTTCTGCCTTTGATGGTAGAGTGGCCGATAGATCCTCATTGCTGTACTTCATATATATTCATGAGCTTTTCTAGTGCCACAAAGCAAATTTGGTCTTGGAATAGAATTTCAGATGGAAACTTCTGCTTCTCTTCGTGTTGAGTATTATATGTGGTTAGATCCTGGCTTTTCATCTCATGATGACTTTATGATTTTCAGGCTGTTTCAGGAAGACCTCCACCAGCCACTTCCATGGGAGTTGGGCAATTTTTTAAACCAGCAGACGGAGAAACAGCCTTATCTTCTGGGTCGTTGATTCGGTCTATGTTTTCTTTACAGGTTTGTGGTGGGTGGAGCTTACTTAACTAGAGAGGATGAAAAAAAGTTTGAGCTATATATACCTTTTAATACATTATTTTTCGGTTCAAATTTGCAGGAGATGACGTTGAATGAGGATCATCCTCTTGCACTCAATCTGTCTTTCTCTGTTAGCTTGGGTCTCATGCCTGTGACGTTATCTGTCAAAACAACTGGTTGTGGAATAAGAAAGTCAGAGTTCACTGCTGATGAAACTGGAGAGATGGAAATTGACAGTAAGGGTTTCTCCTATTTAACAAATAAGGCATCTTGTACTGTTTCTATTAATTAGTAAAGAGTTTCGTACTTTTTTACTTGTTATTGTGTTACTTGCCAACATCTTTCACCAATCCCTCCAAATTTTATAAATCTTGGTGGAATTGATGTTTGAGGAATTTCTTGGAGGGAATTTGAAGTGTTACTTCCATATCCCTTTTGCTAAGTAAATGCAATACAAATTTAAGAAGCTTTATGTTTACTCACCTTCCTTTAACTGCTATTCAATCTGCCCCATCAAAGGGATCTTTAGATAGAAGTAGTTGTATAAAAACAATAACTGGTAAATCACATGTATCATGCACACCTTCAACTTGCCACCTTTGTATGTAACTGCAGAAAATGTAACCAAGTAAAAAGTAACTTCTTTAGTTCATTCAGCTGAGTATTAATCTTACCAGATAAATGTTCCATATATAAGATTGAATGTCGCAGTTTTTGTTATTTATTTGTGGTGCTAATGTAACTTATTCTTTTGGATGTAGGGCTGTGTAAACTTCGCTGTTTCCCTCCTGTAGCAATTGCTTGGGATTTCACGTCTGGTCTTCATATTTTTCCTAATCTGTTCTCAGAAACAATTCTTGTGGATTCCTCTCCAGCACTCTGGACTTCCAGCCTAGGGTCAGAAAAGACCAACGTTATATTGCTGGTATAATAACAGACCCCTTAGTTTCTCGTTCGGTTAGAAAGTTGAAAAACTGCTGCTCTGTTTCTTTAGCTCTTACATGACTTTGTTTTCCCTCTTATGTGCAGATTGATCCACATTGTTCGTACAAAACAAGTATTGGTGTTAATGTAACCTCTGCAGCTAAAAGATTTTCGCTTTTAT</genome_strand>
        <mrna_strand>CAAAACCATTTTGTTTTTGTCACAAATCTTTCTCCATGTTCCGGTGTACGACTGCACCTTTGGCCTGAGAAAGGAACTGAAGTTTCCACTTTACCGATCAATAAACGGGTTTTAGAAGTTACATCAAAGATGGTGCAAATTCCATCTGGACCAGCTCCGAGGCAG....................................................................................................GTTGAACCAGGTACTCAGACTGAGCAGGCACCTCCCTCTGCTGTATTTTGGTTGCACCCAGAGGATATGCGTGGTTTCAGATATCTGACCATCTCAGTGGCACCTCGCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTTCAGGAAGACCTCCACCAGCCACTTCCATGGGAGTTGGGCAATTTTTTAAACCAGCAGACGGAGAAACAGCCTTATCTTCTGGGTCGTTGATTCGGTCTATGTTTTCTTTACAG.................................................................................................GAGATGACGTTGAATGAGGATCATCCTCTTGCACTCAATCTGTCTTTCTCTGTTAGCTTGGGTCTCATGCCTGTGACGTTATCTGTCAAAACAACTGGTTGTGGAATAAGAAAGTCAGAGTTCACTGCTGATGAAACTGGAGAGATGGAAATTGACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGTGTAAACTTCGCTGTTTCCCTCCTGTAGCAATTGCTTGGGATTTCACGTCTGGTCTTCATATTTTTCCTAATCTGTTCTCAAAAACAATTCTTGTGGATTCCTCTCCAGCACTCTGGACTTCCAGCCTAGGGTCAAAAAAGACCAACGTTATATTGCTG........................................................................................................ATTGATCCACATTGTTCGTACAAAACAAGTATTGGTGTTAATGTAACCTCTGCAGCTAAAAGATTTTCGCTTTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E737152" ref_strand="+" ref_description="SGN-E737152 [LC08CG02]">
      <seq>cgtctcactacgcctttcctaaaattgggattcattcccttttctggaaaggcacacacttatctttactttcttgattcttgattcttgtcgccttcaaccaaagatttgtcaaaattcctattatcattgcaacaaccatagatctccaatcaggtgggttattgaaccgatcaagatgaagtggatgggcggtagcgtgagccaaaacatgcaaggctgcagagcgaaatttagagtgattgcattggttctacttgctatatctataggtttagctggtctttatagcatgctaaaacccatatctaatggatgtaccatgacatacatgtatcctacttatatccctgtacctacaccgaaaaatctgtcgtccatgaagtatggattacatctataccatgaaggatggagaaagattaatttcagcgatcatcttaagacacttagtggagttcctgttctttttatccctggcaatggtggaagctacaaacaggtgagatctgtggctgcagaatctgatagagcttatcaaggaggtcctcttgagcacagcttttaccaagaagcctctctaactctcggagagggagtagattttgatgtcaccagcactcctttaccctatcaatacacatccatgcttgactggtttgctgtggatcttgaaggtgaacattctgcaatggatggtcgaattcttgaagaacacacagattatgttgtatatgccattcacaggatattggatcattataaagagtcccacgatgcacgagttaaggaaggtgctgctgtgtctaggagtcctccgagaagtgtgatattggttggtcattcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="42431" stop="38600"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42131" g_stop="41976" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41975" i_stop="41804" i_length="172">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41803" g_stop="41458" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="502" r_length="346" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41457" i_stop="40063" i_length="1395">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="40062" g_stop="39817" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="748" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="39816" i_stop="38999" i_length="818">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38998" g_stop="38900" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="749" r_stop="847" r_length="99" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E737152" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>847</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737152" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42131" e_stop="41976"/>
          <exon e_start="41803" e_stop="41458"/>
          <exon e_start="40062" e_stop="39817"/>
          <exon e_start="38998" e_stop="38900"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTCTCACTACGCCTTTCCTAAAATTGGGATTCATTCCCTTTTCTGGAAAGGCACACACTTATCTTTACTTTCTTGATTCTTGATTCTTGTCGCCTTCAACCAAAGATTTGTCAAAATTCCTATTATCATTGCAACAACCATAGATCTCCAATCAGGTACACCTTTCCAACTAAAGAATGTGTTTTGTTTTCATTGCACTATAGGATGTTTCAGTGCACATATTCTGTTTGTAGATTGTTCCCAAAGAAAACAGAATCCAACTTCCATTTTTCACTTCTTGGGTGAAAGATCTATGTACTGAGCGTTACATCTTGTGTAATTTGGTAGGTGGGTTATTGAACCGATCAAGATGAAGTGGATGGGCGGTAGCGTGAGCCAAAACATGCAAGGCTGCAGAGCGAAATTTAGAGTGATTGCATTGGTTCTACTTGCTATATCTATAGGTTTAGCTGGTCTTTATAGCATGCTAAAACCCATATCTAATGGATGTACCATGACATACATGTATCCTACTTATATCCCTGTACCTACACCGAAAAATCTGTCGTCCATGAAGTATGGATTACATCTATACCATGAAGGATGGAGAAAGATTAATTTCAGCGATCATCTTAAGACACTTAGTGGAGTTCCTGTTCTTTTTATCCCTGGCAATGGTGGAAGCTACAAACAGGCAAGTTTCTTAACTATGTCCTCAAATCTTTCGTAACAGAATTGCCATCATATGTCTCTTCAATTTTCTCAAATCTTCCATCTATGAATGTATTAATGCATGACTAATTCCAATTAGATGGAACGAGGTACCACATGTGTGCGTGCATTTAGTCATGACAGATGAGCAGATACAGAACTTAAGATGTTGCTGACTGCACAGAGAAACAGTCTTATATCCTTGAAACTGTTCTCTATATTCTTTGGTACCCTGAAAGCATAACACAAGTTCCCTCTGGTTAATTTATGCTAAAACTATTTGCTTGCTCTGTGACTGCATTAAATTAAACTGTCAGAGGTAGTAATTAATGAAGAGTAAGTAAATGGTATTTATGTGTGAACCAATTAAATATTCTTGGCTTACGTAGAATGGTACGATTAAAAGATTGAAATGGTGGAAATAACCTTTAAGTTCTGGATCTTCCCTTTCTGTAGGGGGCTTACATCAATCAATTGATTCTAAGATAAGCACCGAAAGTGCTTAATAGCCAAAATCAAGGCCGTGTTTCTACTTCTAAGCACTTCTGGTTTGACCAACTTTTATACTATTTTTTGTTTTTGATTATCAAGTTATTTCTTTTTTTGGTTTGACCTACATTACCTAATAGTGTTTGTTATTCTGGAATTACACTTTTCGAAACAAAGCCCCTAACCAGCTGTTTGTTCATTTCCGCCTTTCATTTTTCTCTCAACTGTGCTTACTTCCTAGCCATTTTTCATCTGTCACTCCAGTTATGATGAAATAATTTATATTTATTCAAATAGTTTAATCTAATCAATTTAAAACTTAATAGTGAATTGAGGCATAAATTAGTTTGTATTTGAATCAGTTTGAAATTAAGAATCTTGCAATAATCAACTTCTTTCAAGCGTGAGGCATTGAAGTTGTTTTAACCGAAAAAGTGTTTGATACCAAACATATCAGCGACTTACCATCAGTTTTCAGCACTTCTACCAAAAACCGTTTCTGCATATTAATACCAACTTCAGCACTTATATGTGCTTTTTTAACACTTGACAAAGGGGTTCCAAACCAAGAGCTTTTCAAGGAGTGTATTTTGGAAATCGGGTTGCTTCAATCAGACAAGTTGCTGTTCTTCTACCCATTTTAGACAAACCTGATTCAGAATCATCTCTTTTACGGATGTTATAAAAAAAGTTTACTTGCTGTGACAACTGTTGATTGATAGACTTATTCTAGAGAAGGTGGCGTGGAGGTTGCACTCTTCCTTTTAGCTAGAGATTATTTATTAACTGCTTGTTATGTGAAGGTATGTGCATCATAATATGAGTGCAAGACATGTTACTGAAATTATTGTTCTTGTTTGTTCCTAATCCTTTTCAAATGCTTTTACAGGTGAGATCTGTGGCTGCAGAATCTGATAGAGCTTATCAAGGAGGTCCTCTTGAGCACAGCTTTTACCAAGAAGCCTCTCTAACTCTCGGAGAGGGAGTAGATTTTGATGTCACCAGCACTCCTTTACCCTATCAATACACATCCATGCTTGACTGGTTTGCTGTGGATCTTGAAGGTGAACATTCTGCAATGGATGGTCGAATTCTTGAAGAACACACAGATTATGTTGTATATGCCATTCACAGGGTATAAAGTTTCTTACTCAAGAAAAAATATCTCTTTTTTGACATTTGACTGATGCAACGTGATGTCAATCTTTATTGCGTAATTCCATAGCTAGTCCAATATACATAGAGATGAATACATGATGTTTTCCGGGAAAAGGGAGAAGGTAAAAAGTAAAAATTTCAAGTTGATATGGTTCACCTTAAAAAATTCGTTGACAATAGACTGGACCATTTGATGTTATGACAGTGAAAAACTTCTAGAACTTCTTAAAGGATATCTGCAAGTGAGAGGGTTCTGGTACTCCAGTCTTACAGCAAGTAGGGGCTTATGTTACACATAGACCGCCAGAGAGTAAGGCAAGACATCAAGAAGAATTTCAAGTGATGGAGTGCTTTATTTGAGTTTATTCTTTATCAATTCGAAGTTTAAAACTCGCTCACTTGATTTAATTTTGCCAACTTTCAGAAAGCATTTAACATTTTCTACTCTTTTTGGATCTAATCCAGACCTGTCATATGCATGGTTAAAAGAAATGGGTAGGCCAGGTGCACAAAGCATCCTACGTTAGCAGGGTCCGTGGTGGGCTGCACCCCAAGGGGTTTGATGTAGACAACCTACCGTATCATATGCATGGTTATTGTCATTAAATAAGTTTGTCTCCGTGGTGGGCTACACCCCAAGGGGTTTGATGTAGACAACCTACCCTATCATATGCATGGTTATACTGCTCTACATTTTATATTCCTCTCTTCTTCCTTCCCCTCCACTCTCTTCGTCTTATTTTATGTGATGTAATTTTCATGTCTGTGTTTCTATTTACATCTTCCTACTCTTAGATATTGGATCATTATAAAGAGTCCCACGATGCACGAGTTAAGGAAGGTGCTGCTGTGTCTAGGAGTCCTCCGAGAAGTGTGATATTGGTTGGTCATTCC</genome_strand>
        <mrna_strand>CGTCTCACTACGCCTTTCCTAAAATTGGGATTCATTCCCTTTTCTGGAAAGGCACACACTTATCTTTACTTTCTTGATTCTTGATTCTTGTCGCCTTCAACCAAAGATTTGTCAAAATTCCTATTATCATTGCAACAACCATAGATCTCCAATCAG............................................................................................................................................................................GTGGGTTATTGAACCGATCAAGATGAAGTGGATGGGCGGTAGCGTGAGCCAAAACATGCAAGGCTGCAGAGCGAAATTTAGAGTGATTGCATTGGTTCTACTTGCTATATCTATAGGTTTAGCTGGTCTTTATAGCATGCTAAAACCCATATCTAATGGATGTACCATGACATACATGTATCCTACTTATATCCCTGTACCTACACCGAAAAATCTGTCGTCCATGAAGTATGGATTACATCTATACCATGAAGGATGGAGAAAGATTAATTTCAGCGATCATCTTAAGACACTTAGTGGAGTTCCTGTTCTTTTTATCCCTGGCAATGGTGGAAGCTACAAACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGATCTGTGGCTGCAGAATCTGATAGAGCTTATCAAGGAGGTCCTCTTGAGCACAGCTTTTACCAAGAAGCCTCTCTAACTCTCGGAGAGGGAGTAGATTTTGATGTCACCAGCACTCCTTTACCCTATCAATACACATCCATGCTTGACTGGTTTGCTGTGGATCTTGAAGGTGAACATTCTGCAATGGATGGTCGAATTCTTGAAGAACACACAGATTATGTTGTATATGCCATTCACAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGGATCATTATAAAGAGTCCCACGATGCACGAGTTAAGGAAGGTGCTGCTGTGTCTAGGAGTCCTCCGAGAAGTGTGATATTGGTTGGTCATTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E537926" ref_strand="+" ref_description="SGN-E537926 [TUS-56-M13](-)">
      <seq>tatccatttttcattggcaatgttccaactcattctgagataaagctagctaattcctatttctatgacaaggcaatgtgcgtacttgcctggaaattacttttacctgaaggagagtttaacttggatcaccctgctgccaacccacttgttgctggtagaggaggacctccgttaaaacgaatgcccccaacattgacaattatagcagagcatgactggatgaaagatcgggctattgcttattcagaggaactccggaaagtaaatgttgatgctcctgttcttgaatataaggatgctgttcacgagtttgcaactcttgacatgcttctcaagacccctcaggctcaggcttgtgctgaggatattgccatctgggtaaagaagcacatttcactccgaggtcatgagttttcatattgatttggatagaggttttgtacagcagcatctctgtgacaaatgctactctcgatttaaggtttagcatttatgccttatataagtttcacggcacattcttttttcccttgggatgtttcttttgtaatatagatgtgatttgcagaaaaataggggttagctgagttttgacttttgaaccacacattccttcaatttgagttaaaagcatttacgtggtatccttgtaaacattttccctgtatcaagagatttctttcattagcagaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="50034" stop="48737"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49734" g_stop="49027" g_length="708"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="708" r_length="708" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E537926" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E537926" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49734" e_stop="49027"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATCCATTTTTCATTGGCAATGTTCCAACTCATTCTGAGATAAAGCTAGCTAATTCCTATTTCTATGACAAGGCAATGTGCGTACTTGCCTGGAAATTACTTTTACCTGAAGGAGAGTTTAACTTGGATCACCCTGCTGCCAACCCACTTGTTGCTGGTAGAGGAGGACCTCCGTTAAAACGAATGCCCCCAACATTGACAATTATAGCAGAGCATGACTGGATGAAAGATCGGGCTATTGCTTATTCAGAGGAACTCCGGAAAGTAAATGTTGATGCTCCTGTTCTTGAATATAAGGATGCTGTTCACGAGTTTGCAACTCTTGACATGCTTCTCAAGACCCCTCAGGCTCAGGCTTGTGCTGAGGATATTGCCATCTGGGTAAAGAAGCACATTTCACTCCGAGGTCATGAGTTTTCATATTGATTTGGATAGAGGTCTTGTACAGCAGCATCTCTGTGACAAATGCTACTCTCGATTTAAGGTTTAGCATTTATGCCTTATATAAGTTTCACGGCACATTCTTTTTTCCCTTGGGATGTTTCTTTTGTAATATAGATGTGATTTGCAGAAAAATAGGGGTTAGCTGAGTTTTGACTTTTGAACCACACATTCCTTCAATTTGAGTTAAAAGCATTTACGTGGTATCCTTGTAAACATTTTCCCTGTATCAAGAGATTTCTTTCATTAGCAGATAATGGAAGAGAT</genome_strand>
        <mrna_strand>TATCCATTTTTCATTGGCAATGTTCCAACTCATTCTGAGATAAAGCTAGCTAATTCCTATTTCTATGACAAGGCAATGTGCGTACTTGCCTGGAAATTACTTTTACCTGAAGGAGAGTTTAACTTGGATCACCCTGCTGCCAACCCACTTGTTGCTGGTAGAGGAGGACCTCCGTTAAAACGAATGCCCCCAACATTGACAATTATAGCAGAGCATGACTGGATGAAAGATCGGGCTATTGCTTATTCAGAGGAACTCCGGAAAGTAAATGTTGATGCTCCTGTTCTTGAATATAAGGATGCTGTTCACGAGTTTGCAACTCTTGACATGCTTCTCAAGACCCCTCAGGCTCAGGCTTGTGCTGAGGATATTGCCATCTGGGTAAAGAAGCACATTTCACTCCGAGGTCATGAGTTTTCATATTGATTTGGATAGAGGTTTTGTACAGCAGCATCTCTGTGACAAATGCTACTCTCGATTTAAGGTTTAGCATTTATGCCTTATATAAGTTTCACGGCACATTCTTTTTTCCCTTGGGATGTTTCTTTTGTAATATAGATGTGATTTGCAGAAAAATAGGGGTTAGCTGAGTTTTGACTTTTGAACCACACATTCCTTCAATTTGAGTTAAAAGCATTTACGTGGTATCCTTGTAAACATTTTCCCTGTATCAAGAGATTTCTTTCATTAGCAGAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E740991" ref_strand="+" ref_description="SGN-E740991 [LC23DB06]">
      <seq>ccatggagacatagcggatgcctttggagcatcaatggcagagccttggttggctgcccatggagatccgtcgaggtgtgttctccttggagtgagttgtgggggaaacatagctgattatgtggcccgaaaggcagtagaagcaggcaatcttttggacccagtcaaggtggtggcacaggtcttgatgtatccatttttcattggcaatgttccaactcattctgagataaagctagctaattcctatttctatgacaaggcaatgtgcgtacttgcctggaaattacttttacctgaaggagagtttaacttggatcaccctgctgccaacccacttgttgctggtagaggaggacctccgttaaaacgaatgcccccaacattgacaattatagcagagcatgactggatgaaagatcgggctattgcttattcagaggaactccggaaagtaaatgttgatgctcctgttcttgaatataaggatgctgttcacgagtttgcaactcttgacatgcttctcaagacccctcaggctcaggcttgtgctgaggatattgccatctgggtaaagaagcacatttcactccgaggtcatgagttttcatattgatttggatagaggtcttgtacagcagcatctctgtgacaaatgctactctcgatttaaggtttagcatttatgccttatataagtatcacggcacattcttttttcccttgggatgtttcttttgtaaaaaagatgtgatttgcagaaaaataggggttagctgagttttgacttttgaaccacacatttcttcaatttgagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="51674" stop="48806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51374" g_stop="51300" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51299" i_stop="49850" i_length="1450">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49849" g_stop="49106" g_length="744"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="819" r_length="744" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E740991" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>819</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E740991" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51374" e_stop="51300"/>
          <exon e_start="49849" e_stop="49106"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCACGGACACATAGCGGATGCCTTTGGAGCATCAATGGCAGAGCCTTGGTTGGCTGCCCATGGAGATCCGTCGAGGTTAGTTTGGCCCTATTATCTTATTCCATACTTGTTCCCTTGGTTTTAGTTTTTGACGTGGAAGCATTAGATGTGATCTTTTAGTCTGTTTTCAATGAGTAATTTTGTTTGTGATTTGATCAGAAATGTGGTCACATGTATGCTATGAAGAATGAAAAGGTAATATATCATTCTTTAATTTTGAATTCCATATTATAAGGTTAGACATTGCAAAACTATCCATATAAAGTAGGTACAGTGAGTAGGAAGGGCCAAGCAATATTTGAGACGTAAATGCTTACTTTTGGGACTCATGACTAGTGGAATCTTTACCTGCCAATTTTCTAGCTTTTTTCGTATAGTATCATGTGGTTACGAGTTGAATTCCATATAGAAGTAAGTGCATTTTGTCTTGTAAATGGGTCATGTTCATGTAGTCTTTTGAGCAATATTAGGAGTTATAATGTTAAATAGCTACTATATCCATTTTTGGAAGGGAAAACGTTTCACTAGTGGTTTTCTGTATGCTAATTTTCCTGTAATCCACTGATTTTGTTTGGTATGACTGGCAAATTCAATTTCTGAATAGAAGTGTTCCTTTTCTTCTTTTTCCTTTTTGGGTGAAACTGTAAGTGTTTTTGATGTAGGTCTTGGTTGTCTTTCAGTACTTGTTTTGAATACTTTTTGGATTTTTATCAGTTTGTTTCTCATCCAGAACCCTTGCACAATCCATGTGGGACAATTATACAACTAAGCACCTCCTCTCTCATGTAACTATATTTGTTCGTTTCAATTTGTTTGTCCTACTTTCCTTTTTAGTCTATTTAAAAAAGAATGACTTTTTTAGCAACTCTTCAGTTTCAATCTCCCCCCATGTCATGTTTAAGACCACGTTATTAAAGGACATTGTGGTACATTTGACATATCTTTAATATAAGACCAGAAGATTTCAAAAGCCTTCTTTACTTTTTTAAACTCCGTGTCAAGACAAAATAGGACAAAAAATTTGAAACGAAGGGAGTACTAATCAGAGGAATGTCCTTCACCAAATATTTGGCTCTATTATCATGTAAAAAGAATTTGAGTATCCAATTCAGAACCCCAAGTCAATGGGTGGAGTAGTTCAAGACCTTTATAAGCTGCTTTGAAAGCCCTTTAACAACCCATGCAGGGCAATTGAATAAAACACTTTCAAATTAACTTCTTCACTTACATTTGAAAATAAAGAGCTTCAGTCCAGCTTTCCTGCAAGATGAGTTTCCTCCATGAATCTTACGTGTGAGCTAACCAACCCCATAAAATGAAACGTAAGGATGAATAGACCACAAATTTTTTGTTTCAAAAGTTCTGCAATCCTGTTACGATAATGAGATGATATCCCCAACTTGGCATGCTTCTCTACAAAATTTTCCGTATAGTATGCGTATCATTTTGTTCTTAAACACACAAGCAAATTGGGTTATTTTTATAGGTGTGTTCTCCTTGGAGTGAGTTGTGGGGGAAACATAGCTGATTATGTGGCCCGAAAGGCAGTAGAAGCAGGCAATCTTTTGGACCCAGTCAAGGTGGTGGCACAGGTCTTGATGTATCCATTTTTCATTGGCAATGTTCCAACTCATTCTGAGATAAAGCTAGCTAATTCCTATTTCTATGACAAGGCAATGTGCGTACTTGCCTGGAAATTACTTTTACCTGAAGGAGAGTTTAACTTGGATCACCCTGCTGCCAACCCACTTGTTGCTGGTAGAGGAGGACCTCCGTTAAAACGAATGCCCCCAACATTGACAATTATAGCAGAGCATGACTGGATGAAAGATCGGGCTATTGCTTATTCAGAGGAACTCCGGAAAGTAAATGTTGATGCTCCTGTTCTTGAATATAAGGATGCTGTTCACGAGTTTGCAACTCTTGACATGCTTCTCAAGACCCCTCAGGCTCAGGCTTGTGCTGAGGATATTGCCATCTGGGTAAAGAAGCACATTTCACTCCGAGGTCATGAGTTTTCATATTGATTTGGATAGAGGTCTTGTACAGCAGCATCTCTGTGACAAATGCTACTCTCGATTTAAGGTTTAGCATTTATGCCTTATATAAGTTTCACGGCACATTCTTTTTTCCCTTGGGATGTTTCTTTTGTAATATAGATGTGATTTGCAGAAAAATAGGGGTTAGCTGAGTTTTGACTTTTGAACCACACATTCCTTCAATTTGAGTT</genome_strand>
        <mrna_strand>CCATGGAGACATAGCGGATGCCTTTGGAGCATCAATGGCAGAGCCTTGGTTGGCTGCCCATGGAGATCCGTCGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTTCTCCTTGGAGTGAGTTGTGGGGGAAACATAGCTGATTATGTGGCCCGAAAGGCAGTAGAAGCAGGCAATCTTTTGGACCCAGTCAAGGTGGTGGCACAGGTCTTGATGTATCCATTTTTCATTGGCAATGTTCCAACTCATTCTGAGATAAAGCTAGCTAATTCCTATTTCTATGACAAGGCAATGTGCGTACTTGCCTGGAAATTACTTTTACCTGAAGGAGAGTTTAACTTGGATCACCCTGCTGCCAACCCACTTGTTGCTGGTAGAGGAGGACCTCCGTTAAAACGAATGCCCCCAACATTGACAATTATAGCAGAGCATGACTGGATGAAAGATCGGGCTATTGCTTATTCAGAGGAACTCCGGAAAGTAAATGTTGATGCTCCTGTTCTTGAATATAAGGATGCTGTTCACGAGTTTGCAACTCTTGACATGCTTCTCAAGACCCCTCAGGCTCAGGCTTGTGCTGAGGATATTGCCATCTGGGTAAAGAAGCACATTTCACTCCGAGGTCATGAGTTTTCATATTGATTTGGATAGAGGTCTTGTACAGCAGCATCTCTGTGACAAATGCTACTCTCGATTTAAGGTTTAGCATTTATGCCTTATATAAGTATCACGGCACATTCTTTTTTCCCTTGGGATGTTTCTTTTGTAAAAAAGATGTGATTTGCAGAAAAATAGGGGTTAGCTGAGTTTTGACTTTTGAACCACACATTTCTTCAATTTGAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E448792" ref_strand="+" ref_description="SGN-E448792 [cSTS-4-B1]">
      <seq>gtgatgttacaattccatggtgggggatttgtgagtgggagcaatgattcggtttcaaatgattttttctgtagaagaattgcaaagctttgtgatgtcattgttttggcagttggatacaggttatcacctgagaatagatacccagctgcatttcaggatgggttgaaagctctgcattggctggcgaagcaggccaatttggctgaatgcagcaagtcattgggcaacagacgtggaggagcagatgtgaaaaaatctgattctcacggacacatagcggatgcctttggagcatcaatggcggagccttggttggctgctcatggagatccgtcgaggtgtgttctccttggagtgagttgtgggggaaacatagctgattatgtggcccggaaggcagtagaagcaggcaaccttttggacccagtcaaggtggtggcacaggtcttgatgtatccatttttcattggcaatgttccaactcattctgagataaagttagctaattcctatttctatgacaagacgatgtgcgtacttgcctggaaactatttttacctgaaggagagtttgacttggatcaccctgctgccaacccacttgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="51940" stop="49283"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51640" g_stop="51300" g_length="341"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="341" r_length="341" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51299" i_stop="49850" i_length="1450">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49849" g_stop="49582" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="609" r_length="268" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E448792" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E448792" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51640" e_stop="51300"/>
          <exon e_start="49849" e_stop="49582"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGATGTTACAATTCCATGGTGGGGGGTTTGTGAGTGGGAGCAATGATTCGGTTTCAAATGATTTTTTCTGTAGAAGAATTGCAAAGCTTTGTGATGTCATTGTTTTGGCAGTTGGATACAGGTTATCACCTGAGAATAGATACCCAGCTGCATTTGAGGATGGGTTGAAAGCTCTGCATTGGCTGGCGAAGCAGGCCAATTTGGCTGAATGCAGCAAGTCATTGGGCAACAGACGTGGTGGAGCAGATGTGAAAAAATCTGATTCCCACGGACACATAGCGGATGCCTTTGGAGCATCAATGGCAGAGCCTTGGTTGGCTGCCCATGGAGATCCGTCGAGGTTAGTTTGGCCCTATTATCTTATTCCATACTTGTTCCCTTGGTTTTAGTTTTTGACGTGGAAGCATTAGATGTGATCTTTTAGTCTGTTTTCAATGAGTAATTTTGTTTGTGATTTGATCAGAAATGTGGTCACATGTATGCTATGAAGAATGAAAAGGTAATATATCATTCTTTAATTTTGAATTCCATATTATAAGGTTAGACATTGCAAAACTATCCATATAAAGTAGGTACAGTGAGTAGGAAGGGCCAAGCAATATTTGAGACGTAAATGCTTACTTTTGGGACTCATGACTAGTGGAATCTTTACCTGCCAATTTTCTAGCTTTTTTCGTATAGTATCATGTGGTTACGAGTTGAATTCCATATAGAAGTAAGTGCATTTTGTCTTGTAAATGGGTCATGTTCATGTAGTCTTTTGAGCAATATTAGGAGTTATAATGTTAAATAGCTACTATATCCATTTTTGGAAGGGAAAACGTTTCACTAGTGGTTTTCTGTATGCTAATTTTCCTGTAATCCACTGATTTTGTTTGGTATGACTGGCAAATTCAATTTCTGAATAGAAGTGTTCCTTTTCTTCTTTTTCCTTTTTGGGTGAAACTGTAAGTGTTTTTGATGTAGGTCTTGGTTGTCTTTCAGTACTTGTTTTGAATACTTTTTGGATTTTTATCAGTTTGTTTCTCATCCAGAACCCTTGCACAATCCATGTGGGACAATTATACAACTAAGCACCTCCTCTCTCATGTAACTATATTTGTTCGTTTCAATTTGTTTGTCCTACTTTCCTTTTTAGTCTATTTAAAAAAGAATGACTTTTTTAGCAACTCTTCAGTTTCAATCTCCCCCCATGTCATGTTTAAGACCACGTTATTAAAGGACATTGTGGTACATTTGACATATCTTTAATATAAGACCAGAAGATTTCAAAAGCCTTCTTTACTTTTTTAAACTCCGTGTCAAGACAAAATAGGACAAAAAATTTGAAACGAAGGGAGTACTAATCAGAGGAATGTCCTTCACCAAATATTTGGCTCTATTATCATGTAAAAAGAATTTGAGTATCCAATTCAGAACCCCAAGTCAATGGGTGGAGTAGTTCAAGACCTTTATAAGCTGCTTTGAAAGCCCTTTAACAACCCATGCAGGGCAATTGAATAAAACACTTTCAAATTAACTTCTTCACTTACATTTGAAAATAAAGAGCTTCAGTCCAGCTTTCCTGCAAGATGAGTTTCCTCCATGAATCTTACGTGTGAGCTAACCAACCCCATAAAATGAAACGTAAGGATGAATAGACCACAAATTTTTTGTTTCAAAAGTTCTGCAATCCTGTTACGATAATGAGATGATATCCCCAACTTGGCATGCTTCTCTACAAAATTTTCCGTATAGTATGCGTATCATTTTGTTCTTAAACACACAAGCAAATTGGGTTATTTTTATAGGTGTGTTCTCCTTGGAGTGAGTTGTGGGGGAAACATAGCTGATTATGTGGCCCGAAAGGCAGTAGAAGCAGGCAATCTTTTGGACCCAGTCAAGGTGGTGGCACAGGTCTTGATGTATCCATTTTTCATTGGCAATGTTCCAACTCATTCTGAGATAAAGCTAGCTAATTCCTATTTCTATGACAAGGCAATGTGCGTACTTGCCTGGAAATTACTTTTACCTGAAGGAGAGTTTAACTTGGATCACCCTGCTGCCAACCCACTTGTT</genome_strand>
        <mrna_strand>GTGATGTTACAATTCCATGGTGGGGGATTTGTGAGTGGGAGCAATGATTCGGTTTCAAATGATTTTTTCTGTAGAAGAATTGCAAAGCTTTGTGATGTCATTGTTTTGGCAGTTGGATACAGGTTATCACCTGAGAATAGATACCCAGCTGCATTTCAGGATGGGTTGAAAGCTCTGCATTGGCTGGCGAAGCAGGCCAATTTGGCTGAATGCAGCAAGTCATTGGGCAACAGACGTGGAGGAGCAGATGTGAAAAAATCTGATTCTCACGGACACATAGCGGATGCCTTTGGAGCATCAATGGCGGAGCCTTGGTTGGCTGCTCATGGAGATCCGTCGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTTCTCCTTGGAGTGAGTTGTGGGGGAAACATAGCTGATTATGTGGCCCGGAAGGCAGTAGAAGCAGGCAACCTTTTGGACCCAGTCAAGGTGGTGGCACAGGTCTTGATGTATCCATTTTTCATTGGCAATGTTCCAACTCATTCTGAGATAAAGTTAGCTAATTCCTATTTCTATGACAAGACGATGTGCGTACTTGCCTGGAAACTATTTTTACCTGAAGGAGAGTTTGACTTGGATCACCCTGCTGCCAACCCACTTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E558241" ref_strand="+" ref_description="SGN-E558241 [17550]">
      <seq>ggatccccggctgcaggaatcggcacgaggctcgctttgaaatctgaaaatggggtttatagaggatatgctcccgccggtaaaaattgcaggaagttgccggtgatgttacaattccatggtgggggatttgtgagtgggagcaatgattcggtttcaaatgattttttctgtagaagaattgcaaagctttgtgatgtcattgttttggcagttggatacaggttatcacctgagaatagatacccagctgcatttgaggatgggttgaaagctctgcattggctggcgaagcaggccaatttggctgaatgcagcaagtcattgggcaacagacgtggaggagcagatgtgaaaaaatctgattctcacggacacatagcggatgcctttggagcatcaatggcggagccttggttggctgctcatggagatccgtcgaggtgtgttctccttggagtgagttgtgggggaaacatagctgattatgtggcccggaaggcagtagaagcaggcaaccttttggacccagtcaaggtggtggcacaggtcttgatgtatccatttttcatgtggcaatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="52012" stop="49412"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51712" g_stop="51300" g_length="413"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="443" r_length="413" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51299" i_stop="49850" i_length="1450">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49849" g_stop="49712" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="582" r_length="139" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E558241" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="0.947" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E558241" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51712" e_stop="51300"/>
          <exon e_start="49849" e_stop="49712"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGCTTTGAAATCTGAAAATGGGGTTTATAGAGGATATGCTCCCGCCGGTAAAAATTGCAGGAAGTTGCCGGTGATGTTACAATTCCATGGTGGGGGGTTTGTGAGTGGGAGCAATGATTCGGTTTCAAATGATTTTTTCTGTAGAAGAATTGCAAAGCTTTGTGATGTCATTGTTTTGGCAGTTGGATACAGGTTATCACCTGAGAATAGATACCCAGCTGCATTTGAGGATGGGTTGAAAGCTCTGCATTGGCTGGCGAAGCAGGCCAATTTGGCTGAATGCAGCAAGTCATTGGGCAACAGACGTGGTGGAGCAGATGTGAAAAAATCTGATTCCCACGGACACATAGCGGATGCCTTTGGAGCATCAATGGCAGAGCCTTGGTTGGCTGCCCATGGAGATCCGTCGAGGTTAGTTTGGCCCTATTATCTTATTCCATACTTGTTCCCTTGGTTTTAGTTTTTGACGTGGAAGCATTAGATGTGATCTTTTAGTCTGTTTTCAATGAGTAATTTTGTTTGTGATTTGATCAGAAATGTGGTCACATGTATGCTATGAAGAATGAAAAGGTAATATATCATTCTTTAATTTTGAATTCCATATTATAAGGTTAGACATTGCAAAACTATCCATATAAAGTAGGTACAGTGAGTAGGAAGGGCCAAGCAATATTTGAGACGTAAATGCTTACTTTTGGGACTCATGACTAGTGGAATCTTTACCTGCCAATTTTCTAGCTTTTTTCGTATAGTATCATGTGGTTACGAGTTGAATTCCATATAGAAGTAAGTGCATTTTGTCTTGTAAATGGGTCATGTTCATGTAGTCTTTTGAGCAATATTAGGAGTTATAATGTTAAATAGCTACTATATCCATTTTTGGAAGGGAAAACGTTTCACTAGTGGTTTTCTGTATGCTAATTTTCCTGTAATCCACTGATTTTGTTTGGTATGACTGGCAAATTCAATTTCTGAATAGAAGTGTTCCTTTTCTTCTTTTTCCTTTTTGGGTGAAACTGTAAGTGTTTTTGATGTAGGTCTTGGTTGTCTTTCAGTACTTGTTTTGAATACTTTTTGGATTTTTATCAGTTTGTTTCTCATCCAGAACCCTTGCACAATCCATGTGGGACAATTATACAACTAAGCACCTCCTCTCTCATGTAACTATATTTGTTCGTTTCAATTTGTTTGTCCTACTTTCCTTTTTAGTCTATTTAAAAAAGAATGACTTTTTTAGCAACTCTTCAGTTTCAATCTCCCCCCATGTCATGTTTAAGACCACGTTATTAAAGGACATTGTGGTACATTTGACATATCTTTAATATAAGACCAGAAGATTTCAAAAGCCTTCTTTACTTTTTTAAACTCCGTGTCAAGACAAAATAGGACAAAAAATTTGAAACGAAGGGAGTACTAATCAGAGGAATGTCCTTCACCAAATATTTGGCTCTATTATCATGTAAAAAGAATTTGAGTATCCAATTCAGAACCCCAAGTCAATGGGTGGAGTAGTTCAAGACCTTTATAAGCTGCTTTGAAAGCCCTTTAACAACCCATGCAGGGCAATTGAATAAAACACTTTCAAATTAACTTCTTCACTTACATTTGAAAATAAAGAGCTTCAGTCCAGCTTTCCTGCAAGATGAGTTTCCTCCATGAATCTTACGTGTGAGCTAACCAACCCCATAAAATGAAACGTAAGGATGAATAGACCACAAATTTTTTGTTTCAAAAGTTCTGCAATCCTGTTACGATAATGAGATGATATCCCCAACTTGGCATGCTTCTCTACAAAATTTTCCGTATAGTATGCGTATCATTTTGTTCTTAAACACACAAGCAAATTGGGTTATTTTTATAGGTGTGTTCTCCTTGGAGTGAGTTGTGGGGGAAACATAGCTGATTATGTGGCCCGAAAGGCAGTAGAAGCAGGCAATCTTTTGGACCCAGTCAAGGTGGTGGCACAGGTCTTGATGTATCCATTTTTCAT-TGGCAATGT</genome_strand>
        <mrna_strand>CTCGCTTTGAAATCTGAAAATGGGGTTTATAGAGGATATGCTCCCGCCGGTAAAAATTGCAGGAAGTTGCCGGTGATGTTACAATTCCATGGTGGGGGATTTGTGAGTGGGAGCAATGATTCGGTTTCAAATGATTTTTTCTGTAGAAGAATTGCAAAGCTTTGTGATGTCATTGTTTTGGCAGTTGGATACAGGTTATCACCTGAGAATAGATACCCAGCTGCATTTGAGGATGGGTTGAAAGCTCTGCATTGGCTGGCGAAGCAGGCCAATTTGGCTGAATGCAGCAAGTCATTGGGCAACAGACGTGGAGGAGCAGATGTGAAAAAATCTGATTCTCACGGACACATAGCGGATGCCTTTGGAGCATCAATGGCGGAGCCTTGGTTGGCTGCTCATGGAGATCCGTCGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTTCTCCTTGGAGTGAGTTGTGGGGGAAACATAGCTGATTATGTGGCCCGGAAGGCAGTAGAAGCAGGCAACCTTTTGGACCCAGTCAAGGTGGTGGCACAGGTCTTGATGTATCCATTTTTCATGTGGCAATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E537928" ref_strand="+" ref_description="SGN-E537928 [TUS-56-M13]">
      <seq>gtttggtatgactggcaaattcaatttctgaatagaagtgttccttttcttctttttcctttttgggtgaaactgtaagtgtttttgatgtaggtcttggttgtctttcagtacttgttttgaatactttttggatttttatcagtttgtttctcatccagaacccttgcacaatccatgtgggacaattatacaactaagcacctcctctctcatgtaactatatttgttcgtttcaatttgtttgtcctactttcctttttagtctatttaaaaaagaatgacttttttagcaactcttcagtttcaatctccccccatgtcatgtttaagaccacgttattaaaggacattgtggtacatttgacatatctttaatataagaccagaagatttcaaaagccttctttacttttttaaactccgtgtcaagacaaaataggacaaaaaatttgaaacgaagggagtactaatcagaggaatgtccttcaccaaatatttggctctattatcatgtaaaaagaatttgagtatccaattcagaaccccaagtcaatgggtggagtagttcaagacctttataagctgctttgaaagccctttaacaacccatgcagggcaattgaataaaacactttcaaattaacttcttcacttacatttgaaaataaagagcttcagtccagctttcctgcaagatgagtttcctccatgaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="51066" stop="49749"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50766" g_stop="50049" g_length="718"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="718" r_length="718" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E537928" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>718</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E537928" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50766" e_stop="50049"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTGGTATGACTGGCAAATTCAATTTCTGAATAGAAGTGTTCCTTTTCTTCTTTTTCCTTTTTGGGTGAAACTGTAAGTGTTTTTGATGTAGGTCTTGGTTGTCTTTCAGTACTTGTTTTGAATACTTTTTGGATTTTTATCAGTTTGTTTCTCATCCAGAACCCTTGCACAATCCATGTGGGACAATTATACAACTAAGCACCTCCTCTCTCATGTAACTATATTTGTTCGTTTCAATTTGTTTGTCCTACTTTCCTTTTTAGTCTATTTAAAAAAGAATGACTTTTTTAGCAACTCTTCAGTTTCAATCTCCCCCCATGTCATGTTTAAGACCACGTTATTAAAGGACATTGTGGTACATTTGACATATCTTTAATATAAGACCAGAAGATTTCAAAAGCCTTCTTTACTTTTTTAAACTCCGTGTCAAGACAAAATAGGACAAAAAATTTGAAACGAAGGGAGTACTAATCAGAGGAATGTCCTTCACCAAATATTTGGCTCTATTATCATGTAAAAAGAATTTGAGTATCCAATTCAGAACCCCAAGTCAATGGGTGGAGTAGTTCAAGACCTTTATAAGCTGCTTTGAAAGCCCTTTAACAACCCATGCAGGGCAATTGAATAAAACACTTTCAAATTAACTTCTTCACTTACATTTGAAAATAAAGAGCTTCAGTCCAGCTTTCCTGCAAGATGAGTTTCCTCCATGAATC</genome_strand>
        <mrna_strand>GTTTGGTATGACTGGCAAATTCAATTTCTGAATAGAAGTGTTCCTTTTCTTCTTTTTCCTTTTTGGGTGAAACTGTAAGTGTTTTTGATGTAGGTCTTGGTTGTCTTTCAGTACTTGTTTTGAATACTTTTTGGATTTTTATCAGTTTGTTTCTCATCCAGAACCCTTGCACAATCCATGTGGGACAATTATACAACTAAGCACCTCCTCTCTCATGTAACTATATTTGTTCGTTTCAATTTGTTTGTCCTACTTTCCTTTTTAGTCTATTTAAAAAAGAATGACTTTTTTAGCAACTCTTCAGTTTCAATCTCCCCCCATGTCATGTTTAAGACCACGTTATTAAAGGACATTGTGGTACATTTGACATATCTTTAATATAAGACCAGAAGATTTCAAAAGCCTTCTTTACTTTTTTAAACTCCGTGTCAAGACAAAATAGGACAAAAAATTTGAAACGAAGGGAGTACTAATCAGAGGAATGTCCTTCACCAAATATTTGGCTCTATTATCATGTAAAAAGAATTTGAGTATCCAATTCAGAACCCCAAGTCAATGGGTGGAGTAGTTCAAGACCTTTATAAGCTGCTTTGAAAGCCCTTTAACAACCCATGCAGGGCAATTGAATAAAACACTTTCAAATTAACTTCTTCACTTACATTTGAAAATAAAGAGCTTCAGTCCAGCTTTCCTGCAAGATGAGTTTCCTCCATGAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E265826" ref_strand="+" ref_description="SGN-E265826 [cLEI-11-C20]">
      <seq>tttggtatgactggcaaattcaatttctgaatagaagtgttccttttcttctttttcctttttgggtgaaactgtaagtgtttttgatgtacgtcttggttgtctttcagtacttgtttagaatactttttggatttttatcagtttgcttctcatccagaacccttgcacaatccatgtgggacaattatacaactaagcacctcctctctcatgtaactatatttgatcgtttcaatttgttagacctactttcctttttagtctatttaaaaaagaatgacttttttagccactcttcaggttcaatctccccccatgtcatgtctaagaccacgttattaaaggacattgtggtacatttgacatatctttaatataagaccagaagatttcaaaagccttctttacttttttaaactccgtgtcaagacaaaataggacaaaaaatttgaaacgaatggagtactaatcacaggaatgtccttcaccaaatatttggctctattatcatgtaaaaagaatttgagtatccaattcagaaccccacgtcaatgggtggagtagttcaagacctttataagctgctctgaaagccctttaacaacccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="51065" stop="49854"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50765" g_stop="50154" g_length="612"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="612" r_length="612" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E265826" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265826" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50765" e_stop="50154"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGTATGACTGGCAAATTCAATTTCTGAATAGAAGTGTTCCTTTTCTTCTTTTTCCTTTTTGGGTGAAACTGTAAGTGTTTTTGATGTAGGTCTTGGTTGTCTTTCAGTACTTGTTTTGAATACTTTTTGGATTTTTATCAGTTTGTTTCTCATCCAGAACCCTTGCACAATCCATGTGGGACAATTATACAACTAAGCACCTCCTCTCTCATGTAACTATATTTGTTCGTTTCAATTTGTTTGTCCTACTTTCCTTTTTAGTCTATTTAAAAAAGAATGACTTTTTTAGCAACTCTTCAGTTTCAATCTCCCCCCATGTCATGTTTAAGACCACGTTATTAAAGGACATTGTGGTACATTTGACATATCTTTAATATAAGACCAGAAGATTTCAAAAGCCTTCTTTACTTTTTTAAACTCCGTGTCAAGACAAAATAGGACAAAAAATTTGAAACGAAGGGAGTACTAATCAGAGGAATGTCCTTCACCAAATATTTGGCTCTATTATCATGTAAAAAGAATTTGAGTATCCAATTCAGAACCCCAAGTCAATGGGTGGAGTAGTTCAAGACCTTTATAAGCTGCTTTGAAAGCCCTTTAACAACCCAT</genome_strand>
        <mrna_strand>TTTGGTATGACTGGCAAATTCAATTTCTGAATAGAAGTGTTCCTTTTCTTCTTTTTCCTTTTTGGGTGAAACTGTAAGTGTTTTTGATGTACGTCTTGGTTGTCTTTCAGTACTTGTTTAGAATACTTTTTGGATTTTTATCAGTTTGCTTCTCATCCAGAACCCTTGCACAATCCATGTGGGACAATTATACAACTAAGCACCTCCTCTCTCATGTAACTATATTTGATCGTTTCAATTTGTTAGACCTACTTTCCTTTTTAGTCTATTTAAAAAAGAATGACTTTTTTAGCCACTCTTCAGGTTCAATCTCCCCCCATGTCATGTCTAAGACCACGTTATTAAAGGACATTGTGGTACATTTGACATATCTTTAATATAAGACCAGAAGATTTCAAAAGCCTTCTTTACTTTTTTAAACTCCGTGTCAAGACAAAATAGGACAAAAAATTTGAAACGAATGGAGTACTAATCACAGGAATGTCCTTCACCAAATATTTGGCTCTATTATCATGTAAAAAGAATTTGAGTATCCAATTCAGAACCCCACGTCAATGGGTGGAGTAGTTCAAGACCTTTATAAGCTGCTCTGAAAGCCCTTTAACAACCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E542326" ref_strand="+" ref_description="SGN-E542326 [TUS-63-J7](-)">
      <seq>ggtaaagaggaaacgtgaaatacttggaaacggttagaggagcttgctggagtgaaagctgcaagcaatgagccagtgctagtttctcataagataacacctcatccaccatctggctagagactgtatctttgttactgttgcttttcccttgatcagctgatcagtacgctaattgagaaaggaggtaatatctcatttgttcatacaccaagacatcctgaattttttgttcccaggtctcactttatggtaacacaaatcaagttggataccaagtcagtgctaatatagaggcaaggactgttcctacggaattgcgtaactggagaagctcaagattttatagtctgctgtccatgcgtggctcgagttcatttggtgtttgctttgttggagtttctaacgatgagattataaaagcgtcatacttgaggtatacgtctaaagttccttttagggtgctgcgcttgaatctctgtacaccgtcaatatatatgctttgacattgcagcttggcatgaaagtatccctgtagataatcttgagaatgttcaaatgaagttgacataattaagttgcaatgtttcaagtagagtaattctttggaattcaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="54024" stop="52805"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53724" g_stop="53109" g_length="616"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="615" r_length="615" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="616" polyA_stop="629"/>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E542326" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="0.979" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542326" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53724" e_stop="53109"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTAAAGAGGAAACGTGAAATTACTTGGAAACGGTTAGAGGAGCTTGCTGGAGTGAAAGCTGCAAGCAATGAGCCAGTGCTAGTTTCTCATAAGATAACACCTCATCCACCATCTGGCTAGAGACTGTATCTTTGTTACTGTTGCTTTTCCCTTGATCAGCTGATCAGTACGCTAATTGAGAAAGGAGGTAATATCTCATTTGTTCATACACCAAGACATCCTGAATTTTTTGTTCCCAGGTCTCACTTTATGGTAACACAAATCAAGTTGGATACCAAGTCAGTGCTAATATAGAGGCAAGGACTGTTCCTACGGAATTGCGTAACTGGAGAAGCTCAAGATTTTATAGTCTGCTGTCCATGCGTGGCTCGAGTTCATTTGGTGTTTGCTTTGTTGGAGTTTCTAACGATGAGATTATAAAAGCGTCATACTTGAGGTATACGTCTAAAGTTCCTTTTAGGGTGCTGCGCTTGAATCTCTGTACACCGTCAATATATATGCTTTGACATTGCAGCTTGGCATGAAAGTATCCCTGTAGATAATCTTGAGAATGTTCAAATGAAGTTGACATAATTAAGTTGCAATGTTTCAAGTAGAGTAATTCTTTGGAATTCA</genome_strand>
        <mrna_strand>GGTAAAGAGGAAACGTGAAA-TACTTGGAAACGGTTAGAGGAGCTTGCTGGAGTGAAAGCTGCAAGCAATGAGCCAGTGCTAGTTTCTCATAAGATAACACCTCATCCACCATCTGGCTAGAGACTGTATCTTTGTTACTGTTGCTTTTCCCTTGATCAGCTGATCAGTACGCTAATTGAGAAAGGAGGTAATATCTCATTTGTTCATACACCAAGACATCCTGAATTTTTTGTTCCCAGGTCTCACTTTATGGTAACACAAATCAAGTTGGATACCAAGTCAGTGCTAATATAGAGGCAAGGACTGTTCCTACGGAATTGCGTAACTGGAGAAGCTCAAGATTTTATAGTCTGCTGTCCATGCGTGGCTCGAGTTCATTTGGTGTTTGCTTTGTTGGAGTTTCTAACGATGAGATTATAAAAGCGTCATACTTGAGGTATACGTCTAAAGTTCCTTTTAGGGTGCTGCGCTTGAATCTCTGTACACCGTCAATATATATGCTTTGACATTGCAGCTTGGCATGAAAGTATCCCTGTAGATAATCTTGAGAATGTTCAAATGAAGTTGACATAATTAAGTTGCAATGTTTCAAGTAGAGTAATTCTTTGGAATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E284406" ref_strand="+" ref_description="SGN-E284406 [cLER-16-M10]">
      <seq>tggagaagaatgctagaggccactggaatcaggcggtgcaaaacttgacattaaatgtccgcaagatcttctctgatatcgattctgaactctttgaagagtgtttgcagaaattcgaagaagacgaggcccaagaagaggaggtaaagaggaaacgtgaaattacttggaaacggttagaggagcttgctggagtgaaagctgcaagcaatgagccagtgctagtttctcataagataacacctcatccaccatctggctagagactgtatctttgttactgttgcttttcccttgatcagctgatcagtacgctaattgagaaaggaggtaatatctcatttgttcatacaccaagacatcctgaattttttgttcccaggtctcactttatggtaacacaaatcaaggtggataccaagttagtgctaatatagaggcaaggactgttcctacggaattgcgtaactggagaagctcaagattttatagtctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="54166" stop="53071"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53866" g_stop="53371" g_length="496"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="496" r_length="496" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E284406" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E284406" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53866" e_stop="53371"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGAAGAATGCTAGAGGCCACTGGAATCAGGCGGTGCAAAACTTGACATTAAATGTCCGCAAGATCTTCTCTGATATCGATTCTGAACTCTTTGAAGAGTGTTTGCAGAAATTCGAAGAAGACGAGGCCCAAGAAGAGGAGGTAAAGAGGAAACGTGAAATTACTTGGAAACGGTTAGAGGAGCTTGCTGGAGTGAAAGCTGCAAGCAATGAGCCAGTGCTAGTTTCTCATAAGATAACACCTCATCCACCATCTGGCTAGAGACTGTATCTTTGTTACTGTTGCTTTTCCCTTGATCAGCTGATCAGTACGCTAATTGAGAAAGGAGGTAATATCTCATTTGTTCATACACCAAGACATCCTGAATTTTTTGTTCCCAGGTCTCACTTTATGGTAACACAAATCAAGTTGGATACCAAGTCAGTGCTAATATAGAGGCAAGGACTGTTCCTACGGAATTGCGTAACTGGAGAAGCTCAAGATTTTATAGTCTG</genome_strand>
        <mrna_strand>TGGAGAAGAATGCTAGAGGCCACTGGAATCAGGCGGTGCAAAACTTGACATTAAATGTCCGCAAGATCTTCTCTGATATCGATTCTGAACTCTTTGAAGAGTGTTTGCAGAAATTCGAAGAAGACGAGGCCCAAGAAGAGGAGGTAAAGAGGAAACGTGAAATTACTTGGAAACGGTTAGAGGAGCTTGCTGGAGTGAAAGCTGCAAGCAATGAGCCAGTGCTAGTTTCTCATAAGATAACACCTCATCCACCATCTGGCTAGAGACTGTATCTTTGTTACTGTTGCTTTTCCCTTGATCAGCTGATCAGTACGCTAATTGAGAAAGGAGGTAATATCTCATTTGTTCATACACCAAGACATCCTGAATTTTTTGTTCCCAGGTCTCACTTTATGGTAACACAAATCAAGGTGGATACCAAGTTAGTGCTAATATAGAGGCAAGGACTGTTCCTACGGAATTGCGTAACTGGAGAAGCTCAAGATTTTATAGTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E396999" ref_strand="+" ref_description="SGN-E396999 [TUS-44-N11]">
      <seq>ttggagaagaatgctagttgccactggaatcaggcggtgcaaaacttgacattaaatgtccgcaagatcttctctgatatcgattctgaactctttgaagagtgtttgcagaaattcgaagaagacgaggcccaagaagaggaggtaaagaggaaacgtgaaattacttggaaacggttagaggagcttgctggagtgaaagctgcaagcaatgagccagtgctagtttctcataagataacacctcatccaccatctggctagagactgtatctttgttactgttgcttttcccttgatcagctgatctgttctctaattgagaaaggaggtaatatctcatttgttcatacaccaaaacatcctgaattttttgttcccaggtctcactttatggtaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="54167" stop="53168"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53867" g_stop="53468" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E396999" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E396999" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53867" e_stop="53468"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGAGAAGAATGCTAGAGGCCACTGGAATCAGGCGGTGCAAAACTTGACATTAAATGTCCGCAAGATCTTCTCTGATATCGATTCTGAACTCTTTGAAGAGTGTTTGCAGAAATTCGAAGAAGACGAGGCCCAAGAAGAGGAGGTAAAGAGGAAACGTGAAATTACTTGGAAACGGTTAGAGGAGCTTGCTGGAGTGAAAGCTGCAAGCAATGAGCCAGTGCTAGTTTCTCATAAGATAACACCTCATCCACCATCTGGCTAGAGACTGTATCTTTGTTACTGTTGCTTTTCCCTTGATCAGCTGATCAGTACGCTAATTGAGAAAGGAGGTAATATCTCATTTGTTCATACACCAAGACATCCTGAATTTTTTGTTCCCAGGTCTCACTTTATGGTAA</genome_strand>
        <mrna_strand>TTGGAGAAGAATGCTAGTTGCCACTGGAATCAGGCGGTGCAAAACTTGACATTAAATGTCCGCAAGATCTTCTCTGATATCGATTCTGAACTCTTTGAAGAGTGTTTGCAGAAATTCGAAGAAGACGAGGCCCAAGAAGAGGAGGTAAAGAGGAAACGTGAAATTACTTGGAAACGGTTAGAGGAGCTTGCTGGAGTGAAAGCTGCAAGCAATGAGCCAGTGCTAGTTTCTCATAAGATAACACCTCATCCACCATCTGGCTAGAGACTGTATCTTTGTTACTGTTGCTTTTCCCTTGATCAGCTGATCTGTTCTCTAATTGAGAAAGGAGGTAATATCTCATTTGTTCATACACCAAAACATCCTGAATTTTTTGTTCCCAGGTCTCACTTTATGGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E457999" ref_strand="+" ref_description="SGN-E457999 [cPRO-4-I12]">
      <seq>cttaggtgagctggaggaggttctagaagcaactcagcctccagaattccagcgttgtatggtgcctttgtttcatcagatcagtcgttgtttgagcagctcgcactttcaggtggctgagagggccttgttcctatggaacaataatcatgttgagaacctaatcaaacaaaatcgtaaagttatactgccgataatcttccctgccttggagaagaatgctagaggccactggaatcaggcggtgcaaaacttgacattaaatgtccgcaagatcttctctgatatcgattctgaactctttgaagagtgtttgcagaaattcgaaagaagacaggcccaangaagaggaggtaaagaggaaaacgtgaaattacttgnaaacggttagaggagcttgctggaatgaaagctgcaagcaatgagccagtgctagtttctcataaagacaacgccctcatttcacatctggctagagactgaaatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="56961" stop="53292"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56661" g_stop="56550" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56549" i_stop="53964" i_length="2586">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53963" g_stop="53592" g_length="372"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="489" r_length="377" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E457999" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E457999" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56661" e_stop="56550"/>
          <exon e_start="53963" e_stop="53592"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTAGGTGAGCTGGAGGAGGTTCTAGAAGCAACTCAGCCTCCAGAATTCCAGCGTTGTATGGTGCCTTTGTTTCATCAGATCAGTCGTTGTTTGAGCAGCTCGCACTTTCAGGTGGGTAGTTCTAGTTATTTGGAATTTTATTTTATTTCCTTTGCTCTTTGTGTTGCTAATCATCTATGATCAGGCTTAGGTCGAAACAGGAATATGGTGTAAAGCCAATTTGCTGTTTCTTTCATTTTTGTTCCTTTGAGACAAAGTAATAAGTTAATTGATGTTAGCTGGAAAACTTGGATATATAAAGTGGCATACAAAAGAGTAGGGGCCCCATCAAAAAACGTGGTTCTTTAAGAATGCATCCAATCATCTACACTTACAGGGATGCGATAAGTGCACCCAAAATTCACCAAGAACAAAAGCCAAGTTCTTAACTTCACAAATTCATTTTAAATACCTTCAAATGTTCCATTCTTCTGTCTCCAAAGTATTATTGCAGGGTCCAAAGTAGCTGCATCCCATGCTCCACATCTTCTTCTCTTTCTTCTGAAGTCCATTGTGCAATTCGCCATTAACTATAGTCAGCGTTAATCAAGCTGATGCGCATGGCAGTGCACTAGTGAGTGATCTACATCCTTGCTTGACCATGTGCACAAAGTACCAGTTTACATAACACAACTTCCCTTTTCTCGGTTTTTTCAGCCATTACCTTACTTCGAACCAAGTGAACTGAGTATCCTTTCTGACGCGCTGAGACTCTAAAATGACAGATGTAAACCCCCTGCATCGTCTCTTTTCAAATAACCTGCAATAGTAGGACTTCTTACAGAACACTTCATTCCCTCTTCACTTCCATTTCCACGTGGCATGTTCCTACCCATTTCATGTTTTTGCTTTTGTAGTATGCCATTATGTTTTGGAATATCCTATCTCCACATCTTGTAGAGTTATTCTGAGCCTCTTATGCTAATAAACTCTGCTCTTGTGTCCTGTAGACATGATGAATCGTCATATCCTTCAAACTCAATGTGTTGTACATGATCTGAAAGGCAACGCTCAAAGTATCATTGCATACTACTTGCGCCTCTAAAAGCTGATCCTATTTTCGTTCCCAACAGTAAAAATGATGTTGTCGCTAAACTCTTCTCTCCCTTTATGTTGTTCCATATTCATGGGCCCTTTATGTGTGCCACTCTTGAATGCAATCACTCTCCTACAAAGCCTGTACCTTACTGTCTAACCTCCAAGGCCACCTTATTGGAGATGTGACCACCTCCCAAGTTCATTATATGAAATTTTATTCCATTGTCTGTATAACATTAGCCTTTTCAACCTTTTGGTGACACTAGCCGGCACATGCATGCAAGAATGGATGCTTGACAGAGTGTTGTTGATCAATGTCCCCTTGAATCAAAAGCTATGATATTGTTATCTTCAAATCATTGAACCTCTATGTAATTGGCAGTTTCTTCCTTCCCATTTTAGGGTCAAAGAAAAATCATTATTACCCATTTTTGGATGTTCCTACCATTGGTTATTCCTGGCATCAGTTAGATACACATCGAGATGTGTATTTTCAGCGGACATATTTTTCATTTAGAGTGGCCGAGTATATCATCCTTTGATCTCTAACTGATTTACTCCATTCATTGGTATAGATCAAACTAACAAACAGGTGTGGATATTTTCAAGTTGTGTTGAGAGCAGCTCACTGCCAAAAGATCAATGAGAAATATCAAGTTGAAGATGATTTTCCCTTCATTTAATCTAGTGCAAATTATTTTGCATCAAGTTTGTACTTTGAATGATGCTTGTTGAGGTTTGAGATTGATGTCAAAAATTGCCATAATTCTGGTTTTTGAAGCAACTTGCTTTGTTGTGAGGAGTCTTACTGTTGAAATTTGCTTTCAATTATTGCAGTAAATTTTAGCACAATAAGTTGCCTAGATTTAGAATGAAATTGAAATTTGAATTTCTATTAGGCGGTTTTAGTTGTTGAGATTACTTGACCTTTTTGAATTTTGTTATGCTGATTATGTTTTCAAGTTGGCTAATTAAAGCCCTTCTATGGTTAAGACATTTACAACACTTTTTTGCTGGCCATCTTATAAAAAATCCAACAGTGGTTCCAGTTGAATTTGCTCAAACAAAATCAATGGAGAATGTAAAAGGAGAATTAAGGTTCTTCAAAATCCCTTAAGGTCTTGAGCAGGAGAAATATGCTGCTCCTTATCAGCCTAGTTAGGAATGAATAAGACACTCTTTTTTCTATTGAACTGTATTTTCCTTCATGTGTTTGCAACTCCCTCTTTCCAAACATCCTAAAATGAAAAGGGAAAAATCTGGTTTGCCAGAGAGAGATAGTTGCTTTTCAGAAGTTCACTTCTGTTTGTGTGGGTCAACAAGCAGACTAAATTTACTGCATCTTGATGGCTTTTCCTCCTGCCGGATATAATGTGCTAGTTTGCTGTTTTCAGTTGTACCTCATGAAACAACTTGATATAAGTAACTGTACATCAAGTGATGGCACATATTGGCTAAGTTGTCATGGCTGTGAATCAAATAGAAAAACGATCAATCAACTGAAAAAATGGTGTGCTTGCTTGAAATGAGATGGATTGGATCAATTCGGTGATGTAACATCTGCCAATGCCTTTTTTTATTTTGTCTTTTCTCTAACTTTTTTTAACTTTGCATCTTCAGGTGGCTGAGAGGGCCTTGTTCCTATGGAACAATGATCATGTTGAGAACCTAATCAAACAAAATCATAGAGTTATACTGCCGATAATCTTCCCTTCCTTGGAGAAGAATGCTAGAGGCCACTGGAATCAGGCGGTGCAAAACTTGACATTAAATGTCCGCAAGATCTTCTCTGATATCGATTCTGAACTCTTTGAAGAGTGTTTGCAGAAATTCG-AAGAAGACGAGGCCCAA-GAAGAGGAGGTAAAGAGG-AAACGTGAAATTACTTGGAAACGGTTAGAGGAGCTTGCTGGAGTGAAAGCTGCAAGCAATGAGCCAGTGCTAGTTTCTCAT-AAGATAAC-ACCTCATCCACCATCTGGCTAGAGACTG-TATCTT</genome_strand>
        <mrna_strand>CTTAGGTGAGCTGGAGGAGGTTCTAGAAGCAACTCAGCCTCCAGAATTCCAGCGTTGTATGGTGCCTTTGTTTCATCAGATCAGTCGTTGTTTGAGCAGCTCGCACTTTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCTGAGAGGGCCTTGTTCCTATGGAACAATAATCATGTTGAGAACCTAATCAAACAAAATCGTAAAGTTATACTGCCGATAATCTTCCCTGCCTTGGAGAAGAATGCTAGAGGCCACTGGAATCAGGCGGTGCAAAACTTGACATTAAATGTCCGCAAGATCTTCTCTGATATCGATTCTGAACTCTTTGAAGAGTGTTTGCAGAAATTCGAAAGAAGAC-AGGCCCAANGAAGAGGAGGTAAAGAGGAAAACGTGAAATTACTTGNAAACGGTTAGAGGAGCTTGCTGGAATGAAAGCTGCAAGCAATGAGCCAGTGCTAGTTTCTCATAAAGACAACGCCCTCATTTCACATCTGGCTAGAGACTGAAATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E404520" ref_strand="+" ref_description="SGN-E404520 [PPC-14-E18]">
      <seq>gctctttccaacatactaaaaatgaaaagggaataatctggattgccagagagagatagttgcttttcagaagttcacttctatttgtgtgggtcaacaagcagactaaatttgctgcatcttgatggcttttcctccagctggatataatgtgctagtttgctgtttttcagttgtgcctgatgaaacaacttgatatgaataactgtacaacttgtgatggtacatattggctaagttgtcatggctgtgaatcaaatagaaaacaatgaatcaactgaaaaaatagtgtgcttgtttaatggaatgatatggattggatcaattcggtgatgtaacatccgccaatgccttttttttttttccttttctctaactctttttaactttgcatcttcaggtggctgagaaggccttgttcctatggaacaataatcatgttgagaacctaatcaaacaaaatcgtaaagttatactgccgataatcttccctgccttggagaagaatgctagaagccactggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="54660" stop="53539"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54361" g_stop="53839" g_length="523"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="525" r_length="525" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E404520" ref_strand="+">
        <total_alignment_score>0.914</total_alignment_score>
        <cumulative_length_of_scored_exons>523</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E404520" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54361" e_stop="53839"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCTTTCCAAACATCCT-AAAATGAAAAGGGAAAAATCTGGTTTGCCAGAGAGAGATAGTTGCTTTTCAGAAGTTCACTTCTGTTTGTGTGGGTCAACAAGCAGACTAAATTTACTGCATCTTGATGGCTTTTCCTCCTGCCGGATATAATGTGCTAGTTTGCTG-TTTTCAGTTGTACCTCATGAAACAACTTGATATAAGTAACTGTACATCAAGTGATGGCACATATTGGCTAAGTTGTCATGGCTGTGAATCAAATAGAAAAACGATCAATCAACTGAAAAAATGGTGTGCTTG-CT--TGAAATGAGATGGATTGGATCAATTCGGTGATGTAACATCTGCCAATGCCTTTTTTTATTTTGTCTTTTCTCTAACTTTTTTTAACTTTGCATCTTCAGGTGGCTGAGAGGGCCTTGTTCCTATGGAACAATGATCATGTTGAGAACCTAATCAAACAAAATCATAGAGTTATACTGCCGATAATCTTCCCTTCCTTGGAGAAGAATGCTAGAGGCCACTGGAA</genome_strand>
        <mrna_strand>GCTCTTTCC-AACATACTAAAAATGAAAAGGGAATAATCTGGATTGCCAGAGAGAGATAGTTGCTTTTCAGAAGTTCACTTCTATTTGTGTGGGTCAACAAGCAGACTAAATTTGCTGCATCTTGATGGCTTTTCCTCCAGCTGGATATAATGTGCTAGTTTGCTGTTTTTCAGTTGTGCCTGATGAAACAACTTGATATGAATAACTGTACAACTTGTGATGGTACATATTGGCTAAGTTGTCATGGCTGTGAATCAAATAG-AAAACAATGAATCAACTGAAAAAATAGTGTGCTTGTTTAATGGAATGATATGGATTGGATCAATTCGGTGATGTAACATCCGCCAATGCCTTTTTTT-TTTTTCCTTTTCTCTAACTCTTTTTAACTTTGCATCTTCAGGTGGCTGAGAAGGCCTTGTTCCTATGGAACAATAATCATGTTGAGAACCTAATCAAACAAAATCGTAAAGTTATACTGCCGATAATCTTCCCTGCCTTGGAGAAGAATGCTAGAAGCCACTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E611753" ref_strand="+" ref_description="SGN-E611753 [61508]">
      <seq>gtcataagaggtttgttgaaatattggcctatcacaaacagttccaaggaagtagtgttcttaggtgagctggaggaggttctagaagcaactcagcctccagaattccagcgttgtatggtgcctttgtttcatcagatcagtcgttgtttgagcagctcgcactttcaggtggctgagagggccttgttcctatggaacaataatcatgttgagaacctaatcaaacaaaatcgtaaagttatactgccgataatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="57020" stop="53576"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56720" g_stop="56550" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56549" i_stop="53964" i_length="2586">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53963" g_stop="53876" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="259" r_length="88" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E611753" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>259</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E611753" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56720" e_stop="56550"/>
          <exon e_start="53963" e_stop="53876"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCATAAGAGGTTTGTTGAAATATTGGCCTATCACAAACAGTTCCAAGGAAGTAGTGTTCTTAGGTGAGCTGGAGGAGGTTCTAGAAGCAACTCAGCCTCCAGAATTCCAGCGTTGTATGGTGCCTTTGTTTCATCAGATCAGTCGTTGTTTGAGCAGCTCGCACTTTCAGGTGGGTAGTTCTAGTTATTTGGAATTTTATTTTATTTCCTTTGCTCTTTGTGTTGCTAATCATCTATGATCAGGCTTAGGTCGAAACAGGAATATGGTGTAAAGCCAATTTGCTGTTTCTTTCATTTTTGTTCCTTTGAGACAAAGTAATAAGTTAATTGATGTTAGCTGGAAAACTTGGATATATAAAGTGGCATACAAAAGAGTAGGGGCCCCATCAAAAAACGTGGTTCTTTAAGAATGCATCCAATCATCTACACTTACAGGGATGCGATAAGTGCACCCAAAATTCACCAAGAACAAAAGCCAAGTTCTTAACTTCACAAATTCATTTTAAATACCTTCAAATGTTCCATTCTTCTGTCTCCAAAGTATTATTGCAGGGTCCAAAGTAGCTGCATCCCATGCTCCACATCTTCTTCTCTTTCTTCTGAAGTCCATTGTGCAATTCGCCATTAACTATAGTCAGCGTTAATCAAGCTGATGCGCATGGCAGTGCACTAGTGAGTGATCTACATCCTTGCTTGACCATGTGCACAAAGTACCAGTTTACATAACACAACTTCCCTTTTCTCGGTTTTTTCAGCCATTACCTTACTTCGAACCAAGTGAACTGAGTATCCTTTCTGACGCGCTGAGACTCTAAAATGACAGATGTAAACCCCCTGCATCGTCTCTTTTCAAATAACCTGCAATAGTAGGACTTCTTACAGAACACTTCATTCCCTCTTCACTTCCATTTCCACGTGGCATGTTCCTACCCATTTCATGTTTTTGCTTTTGTAGTATGCCATTATGTTTTGGAATATCCTATCTCCACATCTTGTAGAGTTATTCTGAGCCTCTTATGCTAATAAACTCTGCTCTTGTGTCCTGTAGACATGATGAATCGTCATATCCTTCAAACTCAATGTGTTGTACATGATCTGAAAGGCAACGCTCAAAGTATCATTGCATACTACTTGCGCCTCTAAAAGCTGATCCTATTTTCGTTCCCAACAGTAAAAATGATGTTGTCGCTAAACTCTTCTCTCCCTTTATGTTGTTCCATATTCATGGGCCCTTTATGTGTGCCACTCTTGAATGCAATCACTCTCCTACAAAGCCTGTACCTTACTGTCTAACCTCCAAGGCCACCTTATTGGAGATGTGACCACCTCCCAAGTTCATTATATGAAATTTTATTCCATTGTCTGTATAACATTAGCCTTTTCAACCTTTTGGTGACACTAGCCGGCACATGCATGCAAGAATGGATGCTTGACAGAGTGTTGTTGATCAATGTCCCCTTGAATCAAAAGCTATGATATTGTTATCTTCAAATCATTGAACCTCTATGTAATTGGCAGTTTCTTCCTTCCCATTTTAGGGTCAAAGAAAAATCATTATTACCCATTTTTGGATGTTCCTACCATTGGTTATTCCTGGCATCAGTTAGATACACATCGAGATGTGTATTTTCAGCGGACATATTTTTCATTTAGAGTGGCCGAGTATATCATCCTTTGATCTCTAACTGATTTACTCCATTCATTGGTATAGATCAAACTAACAAACAGGTGTGGATATTTTCAAGTTGTGTTGAGAGCAGCTCACTGCCAAAAGATCAATGAGAAATATCAAGTTGAAGATGATTTTCCCTTCATTTAATCTAGTGCAAATTATTTTGCATCAAGTTTGTACTTTGAATGATGCTTGTTGAGGTTTGAGATTGATGTCAAAAATTGCCATAATTCTGGTTTTTGAAGCAACTTGCTTTGTTGTGAGGAGTCTTACTGTTGAAATTTGCTTTCAATTATTGCAGTAAATTTTAGCACAATAAGTTGCCTAGATTTAGAATGAAATTGAAATTTGAATTTCTATTAGGCGGTTTTAGTTGTTGAGATTACTTGACCTTTTTGAATTTTGTTATGCTGATTATGTTTTCAAGTTGGCTAATTAAAGCCCTTCTATGGTTAAGACATTTACAACACTTTTTTGCTGGCCATCTTATAAAAAATCCAACAGTGGTTCCAGTTGAATTTGCTCAAACAAAATCAATGGAGAATGTAAAAGGAGAATTAAGGTTCTTCAAAATCCCTTAAGGTCTTGAGCAGGAGAAATATGCTGCTCCTTATCAGCCTAGTTAGGAATGAATAAGACACTCTTTTTTCTATTGAACTGTATTTTCCTTCATGTGTTTGCAACTCCCTCTTTCCAAACATCCTAAAATGAAAAGGGAAAAATCTGGTTTGCCAGAGAGAGATAGTTGCTTTTCAGAAGTTCACTTCTGTTTGTGTGGGTCAACAAGCAGACTAAATTTACTGCATCTTGATGGCTTTTCCTCCTGCCGGATATAATGTGCTAGTTTGCTGTTTTCAGTTGTACCTCATGAAACAACTTGATATAAGTAACTGTACATCAAGTGATGGCACATATTGGCTAAGTTGTCATGGCTGTGAATCAAATAGAAAAACGATCAATCAACTGAAAAAATGGTGTGCTTGCTTGAAATGAGATGGATTGGATCAATTCGGTGATGTAACATCTGCCAATGCCTTTTTTTATTTTGTCTTTTCTCTAACTTTTTTTAACTTTGCATCTTCAGGTGGCTGAGAGGGCCTTGTTCCTATGGAACAATGATCATGTTGAGAACCTAATCAAACAAAATCATAGAGTTATACTGCCGATAATCT</genome_strand>
        <mrna_strand>GTCATAAGAGGTTTGTTGAAATATTGGCCTATCACAAACAGTTCCAAGGAAGTAGTGTTCTTAGGTGAGCTGGAGGAGGTTCTAGAAGCAACTCAGCCTCCAGAATTCCAGCGTTGTATGGTGCCTTTGTTTCATCAGATCAGTCGTTGTTTGAGCAGCTCGCACTTTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCTGAGAGGGCCTTGTTCCTATGGAACAATAATCATGTTGAGAACCTAATCAAACAAAATCGTAAAGTTATACTGCCGATAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E726665" ref_strand="+" ref_description="SGN-E726665 [LA12BH10]">
      <seq>aagcggcagacattaatagagcttgttgattatcttagttctgcaaatggaaaattcacagaaactgtcattcaagaaattgttaaaatggtgtcttcaaatctgttcaggtctctaactcctcaacctcgtgaaaacaaagtattggaagcttttgacttggaagatgacgaacccttgatggatcccgcatggccacatttgcaaattgtgtatgagttctttctcagatttgtggcatcaccggagacagatgcaaaattgtctaagcgatatgttgaccattcttttgttctaaggttattagatctctttgattcagaagatccaagagaaagggagttcttgaagacggttctgcaccgaatatatggaaaattcatggtgcaccgcccttttattaggaaatcaatcaacaatatattttaccggtttatctttgaaactgagaagcataatggaatagcagaacttttagaaattttgggcagtataatcaatggatttgcacttccactgaaggaagagcacaagttgttccttgtccgagctcttattccacttcataaaccaaagtgcgtacacatgtatcatcagcagttatcttactgcataacacaatttgtggagaaggattgcaagcttgctgatactgtcataagaggtttgttgaaatattggcctatcacaaacagttccaaggaagtagtgttcttaggtgagctggaggaggttctagaagcaactcagcctccagaattccagcgttgtatggtgcctttgtttcatcagatcagtcgttgtttgagcagctcgcactttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="57674" stop="56252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57374" g_stop="56552" g_length="823"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="823" r_length="823" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E726665" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>823</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E726665" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57374" e_stop="56552"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCGGCAGACATTAATAGAGCTTGTTGATTATCTTAGTTCTGCAAATGGAAAATTCACAGAAACTGTCATTCAAGAAATTGTTAAAATGGTGTCTTCAAATCTGTTCAGGTCTCTAACTCCTCAACCTCGTGAAAACAAAGTATTGGAAGCTTTTGACTTGGAAGATGACGAACCCTTGATGGATCCCGCATGGCCACATTTGCAAATTGTGTATGAGTTCTTTCTCAGATTTGTGGCATCACCGGAGACAGATGCAAAATTGTCTAAGCGATATGTTGACCATTCTTTTGTTCTAAGGTTATTAGATCTCTTTGATTCAGAAGATCCAAGAGAAAGGGAGTTCTTGAAGACGGTTCTGCACCGAATATATGGAAAATTCATGGTGCACCGCCCTTTTATTAGGAAATCAATCAACAATATATTTTACCGGTTTATCTTTGAAACTGAGAAGCATAATGGAATAGCAGAACTTTTAGAAATTTTGGGCAGTATAATCAATGGATTTGCACTTCCACTGAAGGAAGAGCACAAGTTGTTCCTTGTCCGAGCTCTTATTCCACTTCATAAACCAAAGTGCGTACACATGTATCATCAGCAGTTATCTTACTGCATAACACAATTTGTGGAGAAGGATTGCAAGCTTGCTGATACTGTCATAAGAGGTTTGTTGAAATATTGGCCTATCACAAACAGTTCCAAGGAAGTAGTGTTCTTAGGTGAGCTGGAGGAGGTTCTAGAAGCAACTCAGCCTCCAGAATTCCAGCGTTGTATGGTGCCTTTGTTTCATCAGATCAGTCGTTGTTTGAGCAGCTCGCACTTTC</genome_strand>
        <mrna_strand>AAGCGGCAGACATTAATAGAGCTTGTTGATTATCTTAGTTCTGCAAATGGAAAATTCACAGAAACTGTCATTCAAGAAATTGTTAAAATGGTGTCTTCAAATCTGTTCAGGTCTCTAACTCCTCAACCTCGTGAAAACAAAGTATTGGAAGCTTTTGACTTGGAAGATGACGAACCCTTGATGGATCCCGCATGGCCACATTTGCAAATTGTGTATGAGTTCTTTCTCAGATTTGTGGCATCACCGGAGACAGATGCAAAATTGTCTAAGCGATATGTTGACCATTCTTTTGTTCTAAGGTTATTAGATCTCTTTGATTCAGAAGATCCAAGAGAAAGGGAGTTCTTGAAGACGGTTCTGCACCGAATATATGGAAAATTCATGGTGCACCGCCCTTTTATTAGGAAATCAATCAACAATATATTTTACCGGTTTATCTTTGAAACTGAGAAGCATAATGGAATAGCAGAACTTTTAGAAATTTTGGGCAGTATAATCAATGGATTTGCACTTCCACTGAAGGAAGAGCACAAGTTGTTCCTTGTCCGAGCTCTTATTCCACTTCATAAACCAAAGTGCGTACACATGTATCATCAGCAGTTATCTTACTGCATAACACAATTTGTGGAGAAGGATTGCAAGCTTGCTGATACTGTCATAAGAGGTTTGTTGAAATATTGGCCTATCACAAACAGTTCCAAGGAAGTAGTGTTCTTAGGTGAGCTGGAGGAGGTTCTAGAAGCAACTCAGCCTCCAGAATTCCAGCGTTGTATGGTGCCTTTGTTTCATCAGATCAGTCGTTGTTTGAGCAGCTCGCACTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E454262" ref_strand="+" ref_description="SGN-E454262 [cSTS-22-P7]">
      <seq>agtggagcttgttgattatattagttctgtgaatttaaaattcacagaaactgtcattcaagaaatagttaaaatggtatcttcaaatctgttcaggcctcttacttctcaacctcgtgaaaacaaagtattggaagcttttgacttagaagatgacgaacccttgatggatcctgcatggccacatctgcaaattgtgtatgagttctttctcagatttgtggcatcgccggagacagatgcaaaattgtctaagcgatacgttgatcactcttttgttctaaggttattagatctctttgattcagaagatccaagagaaagggaattcttgaagacggttctgcaccgcatatatggaaaattcatggtgcaccgcccttttattaggaaatcaatcaacaatatattttaccggtttatctttgaaactgagaagcataatggaatagcagaacttttagaaattttgggcagtataatcaatggatttgcacttccactgaaggaagagcacaagttgttccttgttcgagctcttattccacttcataaaccaaagtgcgtacacatgtatcatcagcagttatcttactgcataacacaatttgtggagaaagactgcaagctcgctgatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="57660" stop="56421"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57360" g_stop="56721" g_length="640"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="640" r_length="640" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E454262" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E454262" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57360" e_stop="56721"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAGAGCTTGTTGATTATCTTAGTTCTGCAAATGGAAAATTCACAGAAACTGTCATTCAAGAAATTGTTAAAATGGTGTCTTCAAATCTGTTCAGGTCTCTAACTCCTCAACCTCGTGAAAACAAAGTATTGGAAGCTTTTGACTTGGAAGATGACGAACCCTTGATGGATCCCGCATGGCCACATTTGCAAATTGTGTATGAGTTCTTTCTCAGATTTGTGGCATCACCGGAGACAGATGCAAAATTGTCTAAGCGATATGTTGACCATTCTTTTGTTCTAAGGTTATTAGATCTCTTTGATTCAGAAGATCCAAGAGAAAGGGAGTTCTTGAAGACGGTTCTGCACCGAATATATGGAAAATTCATGGTGCACCGCCCTTTTATTAGGAAATCAATCAACAATATATTTTACCGGTTTATCTTTGAAACTGAGAAGCATAATGGAATAGCAGAACTTTTAGAAATTTTGGGCAGTATAATCAATGGATTTGCACTTCCACTGAAGGAAGAGCACAAGTTGTTCCTTGTCCGAGCTCTTATTCCACTTCATAAACCAAAGTGCGTACACATGTATCATCAGCAGTTATCTTACTGCATAACACAATTTGTGGAGAAGGATTGCAAGCTTGCTGATACT</genome_strand>
        <mrna_strand>AGTGGAGCTTGTTGATTATATTAGTTCTGTGAATTTAAAATTCACAGAAACTGTCATTCAAGAAATAGTTAAAATGGTATCTTCAAATCTGTTCAGGCCTCTTACTTCTCAACCTCGTGAAAACAAAGTATTGGAAGCTTTTGACTTAGAAGATGACGAACCCTTGATGGATCCTGCATGGCCACATCTGCAAATTGTGTATGAGTTCTTTCTCAGATTTGTGGCATCGCCGGAGACAGATGCAAAATTGTCTAAGCGATACGTTGATCACTCTTTTGTTCTAAGGTTATTAGATCTCTTTGATTCAGAAGATCCAAGAGAAAGGGAATTCTTGAAGACGGTTCTGCACCGCATATATGGAAAATTCATGGTGCACCGCCCTTTTATTAGGAAATCAATCAACAATATATTTTACCGGTTTATCTTTGAAACTGAGAAGCATAATGGAATAGCAGAACTTTTAGAAATTTTGGGCAGTATAATCAATGGATTTGCACTTCCACTGAAGGAAGAGCACAAGTTGTTCCTTGTTCGAGCTCTTATTCCACTTCATAAACCAAAGTGCGTACACATGTATCATCAGCAGTTATCTTACTGCATAACACAATTTGTGGAGAAAGACTGCAAGCTCGCTGATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E542329" ref_strand="+" ref_description="SGN-E542329 [TUS-63-J7]">
      <seq>cagtttttctgtgtgagaccttgcctagttttaaagatgtaccaactgctgagaaacaaaacttgttcataaaaaaactgaacttgtgctgtgtattatttgactttactgacccaacaaagcacttgaaagaaaaagacatcaagcggcagacattaatagagcttgttgattatcttagttctgcaaatggaaaattcacagaaactgtcattcaagaaattgttaaaatggtgtcttcaaatctgttcaggtctctaactcctcaacctcgtgaaaacaaagtattggaagcttttgacttggaagatgacgaacccttgatggatcccgcatggccacatttgcaaattgtgtatgagttctttctcagatttgtggcatcaccggagacagatgcaaaattgtctaagcgatatgttgaccattcttttgttctaaggttattagatctctttgattcagaagatccaagagaaagggagttcttgaagacggttctgcaccgaatatatggaaaattcatggtgcaccgcccttttattaggaaatcaatcaacaatatattttaccggtttatctttgaaactgagaagcataatggaatagcagaacttttagaaattttgggcagtataatcaatggatttgcacttccactgaaggaagagcacaagttgttccttgtccgagctcttattccacttcataaaccaaagtgcgtacacatgtatcatcagcagttatcttactgcataacacaatttgtggagaaggattgcaagcttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="57817" stop="56428"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57517" g_stop="56728" g_length="790"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="790" r_length="790" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E542329" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>790</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542329" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57517" e_stop="56728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGTTTTTCTGTGTGAGACCTTGCCTAGTTTTAAAGATGTACCAACTGCTGAGAAACAAAACTTGTTCATAAAAAAACTGAACTTGTGCTGTGTATTATTTGACTTTACTGACCCAACAAAGCACTTGAAAGAAAAAGACATCAAGCGGCAGACATTAATAGAGCTTGTTGATTATCTTAGTTCTGCAAATGGAAAATTCACAGAAACTGTCATTCAAGAAATTGTTAAAATGGTGTCTTCAAATCTGTTCAGGTCTCTAACTCCTCAACCTCGTGAAAACAAAGTATTGGAAGCTTTTGACTTGGAAGATGACGAACCCTTGATGGATCCCGCATGGCCACATTTGCAAATTGTGTATGAGTTCTTTCTCAGATTTGTGGCATCACCGGAGACAGATGCAAAATTGTCTAAGCGATATGTTGACCATTCTTTTGTTCTAAGGTTATTAGATCTCTTTGATTCAGAAGATCCAAGAGAAAGGGAGTTCTTGAAGACGGTTCTGCACCGAATATATGGAAAATTCATGGTGCACCGCCCTTTTATTAGGAAATCAATCAACAATATATTTTACCGGTTTATCTTTGAAACTGAGAAGCATAATGGAATAGCAGAACTTTTAGAAATTTTGGGCAGTATAATCAATGGATTTGCACTTCCACTGAAGGAAGAGCACAAGTTGTTCCTTGTCCGAGCTCTTATTCCACTTCATAAACCAAAGTGCGTACACATGTATCATCAGCAGTTATCTTACTGCATAACACAATTTGTGGAGAAGGATTGCAAGCTTGC</genome_strand>
        <mrna_strand>CAGTTTTTCTGTGTGAGACCTTGCCTAGTTTTAAAGATGTACCAACTGCTGAGAAACAAAACTTGTTCATAAAAAAACTGAACTTGTGCTGTGTATTATTTGACTTTACTGACCCAACAAAGCACTTGAAAGAAAAAGACATCAAGCGGCAGACATTAATAGAGCTTGTTGATTATCTTAGTTCTGCAAATGGAAAATTCACAGAAACTGTCATTCAAGAAATTGTTAAAATGGTGTCTTCAAATCTGTTCAGGTCTCTAACTCCTCAACCTCGTGAAAACAAAGTATTGGAAGCTTTTGACTTGGAAGATGACGAACCCTTGATGGATCCCGCATGGCCACATTTGCAAATTGTGTATGAGTTCTTTCTCAGATTTGTGGCATCACCGGAGACAGATGCAAAATTGTCTAAGCGATATGTTGACCATTCTTTTGTTCTAAGGTTATTAGATCTCTTTGATTCAGAAGATCCAAGAGAAAGGGAGTTCTTGAAGACGGTTCTGCACCGAATATATGGAAAATTCATGGTGCACCGCCCTTTTATTAGGAAATCAATCAACAATATATTTTACCGGTTTATCTTTGAAACTGAGAAGCATAATGGAATAGCAGAACTTTTAGAAATTTTGGGCAGTATAATCAATGGATTTGCACTTCCACTGAAGGAAGAGCACAAGTTGTTCCTTGTCCGAGCTCTTATTCCACTTCATAAACCAAAGTGCGTACACATGTATCATCAGCAGTTATCTTACTGCATAACACAATTTGTGGAGAAGGATTGCAAGCTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E736983" ref_strand="+" ref_description="SGN-E736983 [LC08AB10]">
      <seq>gtttttagatttcgatctctgaaccccaactatctaaagtttcaatctttttcatcactcaaaattatggatgttatctgggttcttccgtacatcatttgcccagatcttaatattctttgacctagcttaacaggccagagtctctgtggacctcagcaaaaaaacaagaacaaaggtttactgcacctccccggttcttttttctggttgacagctagcatggatagatgaaaaagagttttactggtctagacaggtagtctgtggtctcatttgtttattggtttagggggtggcagataaggattcggggtggatgagatctgcactggcttgctaacaattcattttgctgcttagacctttcagattgatgaaagttctgttttgagggtgtttaaatcagtaaaacattacgaccagaagatcatattttcaagtgatgatcaaacagatacttaataggctccctagaaagccttccaagtcagcagaaaatcgcgatggaggaagctctgcatcaccgtccaatgcttcaactggttctagaagcagtgatttgtctactgcgcagtcaggaaattcaagtgccactactgtttcaggagtcacttcttcaactctgggaccaaatcatggaaataggctaccgcagggggcaaatgctaaggtgaatggaagtgcagcagtttttctgtgtgagaccttgcctagttttaaagatgtaccaactgctgagaaacaaaacttgttcataaaaaaactgaacttgtgctgtgtattatttgactttactgacccaacaaagcacttgaaagaaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="58910" stop="57080"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58610" g_stop="58543" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58542" i_stop="58460" i_length="83">
            <donor d_prob="0.821" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58459" g_stop="58298" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="230" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58297" i_stop="57977" i_length="321">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57976" g_stop="57380" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="827" r_length="597" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E736983" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>827</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E736983" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58610" e_stop="58543"/>
          <exon e_start="58459" e_stop="58298"/>
          <exon e_start="57976" e_stop="57380"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTATGTAAGCATTAACAACTCATTTTATGTCTGAGTGCTGTTTCTTTTTAATCTTTATTGACTCACTTCTTTTGTGATTCTTTGAAGGGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAGGTAAGATTTTTCAGTTTCTGATTCAGATTATTTGATGCTTGTTTGATTATTAAAATAACTTTCTGCATCAGGGTTTCGCCTTTTGCACTGTTTAATTCACCAAGAATGCACCTTTTTTTAATTGCTAAGTGGAAGTGCACAGAGAACTCTCTTAGTGTGGAGTTGTTTATAATACAAATTACTTACTTTACCAAGTGAAAGAAAGAAAAGGGATTAGGTCACAAATGTTGATCTTTTTAGCTCTTTTCTCCATGATGAAAAAGAAGTTTGAACTTTTCTAGATTTCTTCATTTTACTTGCCTTTTTGTTATTGTTTTTCAGATGAAAAAGAGTTTTACTGGTCTAGACAGGTAGTCTGTGGTCTCATTTGTTTATTGGTTTAGGGGGTGGCAGATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGCGATGGAGGAAGCTCTGCATCACCGTCCAATGCTTCAACTGGTTCTAGAAGCAGTGATTTGTCTACTGCGCAGTCAGGAAATTCAAGTGCCACTACTGTTTCAGGAGTCACTTCTTCAACTCTGGGACCAAATCATGGAAATAGGCTACCGCAGGGGGCAAATGCTAAGGTGAATGGAAGTGCAGCAGTTTTTCTGTGTGAGACCTTGCCTAGTTTTAAAGATGTACCAACTGCTGAGAAACAAAACTTGTTCATAAAAAAACTGAACTTGTGCTGTGTATTATTTGACTTTACTGACCCAACAAAGCACTTGAAAGAAAAAG</genome_strand>
        <mrna_strand>GTTTTTAGATTTCGATCTCTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTAT...................................................................................GGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAG.................................................................................................................................................................................................................................................................................................................................ATGAAAAAGAGTTTTACTGGTCTAGACAGGTAGTCTGTGGTCTCATTTGTTTATTGGTTTAGGGGGTGGCAGATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGCGATGGAGGAAGCTCTGCATCACCGTCCAATGCTTCAACTGGTTCTAGAAGCAGTGATTTGTCTACTGCGCAGTCAGGAAATTCAAGTGCCACTACTGTTTCAGGAGTCACTTCTTCAACTCTGGGACCAAATCATGGAAATAGGCTACCGCAGGGGGCAAATGCTAAGGTGAATGGAAGTGCAGCAGTTTTTCTGTGTGAGACCTTGCCTAGTTTTAAAGATGTACCAACTGCTGAGAAACAAAACTTGTTCATAAAAAAACTGAACTTGTGCTGTGTATTATTTGACTTTACTGACCCAACAAAGCACTTGAAAGAAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E737035" ref_strand="+" ref_description="SGN-E737035 [LC08BA06]">
      <seq>gtttttagatttccatctctgaaccccaactatctaaagtttcaatctttttcatcactcaaaattatggatgttatctgggttcttccgtacatcatttgcccagatcttaatattctttgacctagcttaacaggccagagtctctgtggacctcagcaaaaaaacaagaacaaaggtttactgcacctccccggttcttttttctggttgacagctagcatggatagatgaaaaagagttttactggtctagacaggtagtctgtggtctcatttgtttattggtttagggggtggcagataaggattcggggtggatgagatctgcactggcttgctaacaattcattttgctgcttagacctttcagattgatgaaagttctgttttgagggtgtttaaatcagtaaaacattacgaccagaagatcatattttcaagtgatgatcaaacagatacttaataggctccctagaaagccttccaagtcagcagaaaatcgcgatggaggaagctctgcatcaccgtccaatgcttcaactggttctagaagcagtgatttgtctactgcgcagtcaggaaattcaagtgccactactgtttcaggagtcacttcttcaactctgggaccaaatcatggaaataggctaccgcagggggcaaatgctaaggtgaatggaagtgcagcagtttttctgtgtgagaccttgccctagtttaaagatgtaccaactgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="58910" stop="57167"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58610" g_stop="58543" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58542" i_stop="58460" i_length="83">
            <donor d_prob="0.821" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58459" g_stop="58298" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="230" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58297" i_stop="57977" i_length="321">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57976" g_stop="57467" g_length="510"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="740" r_length="510" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E737035" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737035" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58610" e_stop="58543"/>
          <exon e_start="58459" e_stop="58298"/>
          <exon e_start="57976" e_stop="57467"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTATGTAAGCATTAACAACTCATTTTATGTCTGAGTGCTGTTTCTTTTTAATCTTTATTGACTCACTTCTTTTGTGATTCTTTGAAGGGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAGGTAAGATTTTTCAGTTTCTGATTCAGATTATTTGATGCTTGTTTGATTATTAAAATAACTTTCTGCATCAGGGTTTCGCCTTTTGCACTGTTTAATTCACCAAGAATGCACCTTTTTTTAATTGCTAAGTGGAAGTGCACAGAGAACTCTCTTAGTGTGGAGTTGTTTATAATACAAATTACTTACTTTACCAAGTGAAAGAAAGAAAAGGGATTAGGTCACAAATGTTGATCTTTTTAGCTCTTTTCTCCATGATGAAAAAGAAGTTTGAACTTTTCTAGATTTCTTCATTTTACTTGCCTTTTTGTTATTGTTTTTCAGATGAAAAAGAGTTTTACTGGTCTAGACAGGTAGTCTGTGGTCTCATTTGTTTATTGGTTTAGGGGGTGGCAGATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGCGATGGAGGAAGCTCTGCATCACCGTCCAATGCTTCAACTGGTTCTAGAAGCAGTGATTTGTCTACTGCGCAGTCAGGAAATTCAAGTGCCACTACTGTTTCAGGAGTCACTTCTTCAACTCTGGGACCAAATCATGGAAATAGGCTACCGCAGGGGGCAAATGCTAAGGTGAATGGAAGTGCAGCAGTTTTTCTGTGTGAGACCTTGCCTAGTTTTAAAGATGTACCAACTGCTG</genome_strand>
        <mrna_strand>GTTTTTAGATTTCCATCTCTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTAT...................................................................................GGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAG.................................................................................................................................................................................................................................................................................................................................ATGAAAAAGAGTTTTACTGGTCTAGACAGGTAGTCTGTGGTCTCATTTGTTTATTGGTTTAGGGGGTGGCAGATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGCGATGGAGGAAGCTCTGCATCACCGTCCAATGCTTCAACTGGTTCTAGAAGCAGTGATTTGTCTACTGCGCAGTCAGGAAATTCAAGTGCCACTACTGTTTCAGGAGTCACTTCTTCAACTCTGGGACCAAATCATGGAAATAGGCTACCGCAGGGGGCAAATGCTAAGGTGAATGGAAGTGCAGCAGTTTTTCTGTGTGAGACCTTGCCCTAGTTTAAAGATGTACCAACTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E213524" ref_strand="+" ref_description="SGN-E213524 [cLEC-71-K21]">
      <seq>ttttcctatctttcctcagttgggaatgtttttagatttcgatcactgaaccccaactatctaaagtttcaatctttttcatcactcaaaattatggatgttatctgggttcttccgtacatcatttgcccagatcttaatattctttgacctagcttaacaggccagagtctctgtggacctcagcaaaaaaacaagaacaaaggtttactgcacctccccggttcttttttctggttgacagctagcatggatagatgaaaaagagttttactggtctagacaggtagtctgtggtctcatttgtttattggtttagggggtggcagataaggattcggggtggatgagatctgcactggcttgctaacaattcattttgctgcttagacctttcagattgatgaaagttctgttttgagggtgtttaaatcagtaaaacattacgaccagaagatcatattttcaagtgatgatcaaacagatacttaataggctccctagaaagccttccaagtcagcagaaaatcgcgatggaggaagctctgcatcaccgtccaatgcttcaactggttctagaagcagtgatttgtctactgcgcagtcaggaaattcaagtgccactactgtttcangagtcacttcttcaactctgggaccaaatcatggaaatangctaccgcagggggcaaatgctaaggtgaatggaagtgcagcagtttttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="58937" stop="57208"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58637" g_stop="58543" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58542" i_stop="58460" i_length="83">
            <donor d_prob="0.821" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58459" g_stop="58298" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="257" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58297" i_stop="57977" i_length="321">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57976" g_stop="57508" g_length="469"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="726" r_length="469" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E213524" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>726</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E213524" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58637" e_stop="58543"/>
          <exon e_start="58459" e_stop="58298"/>
          <exon e_start="57976" e_stop="57508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTATGTAAGCATTAACAACTCATTTTATGTCTGAGTGCTGTTTCTTTTTAATCTTTATTGACTCACTTCTTTTGTGATTCTTTGAAGGGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAGGTAAGATTTTTCAGTTTCTGATTCAGATTATTTGATGCTTGTTTGATTATTAAAATAACTTTCTGCATCAGGGTTTCGCCTTTTGCACTGTTTAATTCACCAAGAATGCACCTTTTTTTAATTGCTAAGTGGAAGTGCACAGAGAACTCTCTTAGTGTGGAGTTGTTTATAATACAAATTACTTACTTTACCAAGTGAAAGAAAGAAAAGGGATTAGGTCACAAATGTTGATCTTTTTAGCTCTTTTCTCCATGATGAAAAAGAAGTTTGAACTTTTCTAGATTTCTTCATTTTACTTGCCTTTTTGTTATTGTTTTTCAGATGAAAAAGAGTTTTACTGGTCTAGACAGGTAGTCTGTGGTCTCATTTGTTTATTGGTTTAGGGGGTGGCAGATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGCGATGGAGGAAGCTCTGCATCACCGTCCAATGCTTCAACTGGTTCTAGAAGCAGTGATTTGTCTACTGCGCAGTCAGGAAATTCAAGTGCCACTACTGTTTCAGGAGTCACTTCTTCAACTCTGGGACCAAATCATGGAAATAGGCTACCGCAGGGGGCAAATGCTAAGGTGAATGGAAGTGCAGCAGTTTTTCT</genome_strand>
        <mrna_strand>TTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTAT...................................................................................GGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAG.................................................................................................................................................................................................................................................................................................................................ATGAAAAAGAGTTTTACTGGTCTAGACAGGTAGTCTGTGGTCTCATTTGTTTATTGGTTTAGGGGGTGGCAGATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGCGATGGAGGAAGCTCTGCATCACCGTCCAATGCTTCAACTGGTTCTAGAAGCAGTGATTTGTCTACTGCGCAGTCAGGAAATTCAAGTGCCACTACTGTTTCANGAGTCACTTCTTCAACTCTGGGACCAAATCATGGAAATANGCTACCGCAGGGGGCAAATGCTAAGGTGAATGGAAGTGCAGCAGTTTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E267089" ref_strand="+" ref_description="SGN-E267089 [cLEI-4-B11]">
      <seq>tttttagatttcgatcactgaaccccaactatctaaagtttcaatctttttcatcactcaaaattatggatgttatctgggttcttccgtacatcatttgcccagatcttaatattctttgacctagcttaacaggccagagtctctgtggacctcagcaaaaaaacaagaacaaaggtttactgcacctccccggttcttttttctggttgacagctagcatggatagataaggattcggggtggatgagatctgcactggcttgctaacaattcattttgctgcttagacctttcagattgatgaaagttctgttttgagggtgtttaaatcagtaaaacattacgaccagaagatcatattttcaagtgatgatcaaacagatacttaataggctccctagaaagccttccaagtcagcagaaaatcgcgatggaggaagctctgcatcaccgtccaatgcttcaactggttctagaagcagtgatttgtctactgcgcagtcaggaaattcaagtgccactactgtttcaggagtcacttcttcaactctgggaccaaatcatggaaataggctaccgcagggggcaaatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="58909" stop="57238"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58609" g_stop="58543" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58542" i_stop="58460" i_length="83">
            <donor d_prob="0.821" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58459" g_stop="58298" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="229" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58297" i_stop="57905" i_length="393">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.795" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57904" g_stop="57538" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="596" r_length="367" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E267089" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267089" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58609" e_stop="58543"/>
          <exon e_start="58459" e_stop="58298"/>
          <exon e_start="57904" e_stop="57538"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTATGTAAGCATTAACAACTCATTTTATGTCTGAGTGCTGTTTCTTTTTAATCTTTATTGACTCACTTCTTTTGTGATTCTTTGAAGGGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAGGTAAGATTTTTCAGTTTCTGATTCAGATTATTTGATGCTTGTTTGATTATTAAAATAACTTTCTGCATCAGGGTTTCGCCTTTTGCACTGTTTAATTCACCAAGAATGCACCTTTTTTTAATTGCTAAGTGGAAGTGCACAGAGAACTCTCTTAGTGTGGAGTTGTTTATAATACAAATTACTTACTTTACCAAGTGAAAGAAAGAAAAGGGATTAGGTCACAAATGTTGATCTTTTTAGCTCTTTTCTCCATGATGAAAAAGAAGTTTGAACTTTTCTAGATTTCTTCATTTTACTTGCCTTTTTGTTATTGTTTTTCAGATGAAAAAGAGTTTTACTGGTCTAGACAGGTAGTCTGTGGTCTCATTTGTTTATTGGTTTAGGGGGTGGCAGATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGCGATGGAGGAAGCTCTGCATCACCGTCCAATGCTTCAACTGGTTCTAGAAGCAGTGATTTGTCTACTGCGCAGTCAGGAAATTCAAGTGCCACTACTGTTTCAGGAGTCACTTCTTCAACTCTGGGACCAAATCATGGAAATAGGCTACCGCAGGGGGCAAATGC</genome_strand>
        <mrna_strand>TTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTAT...................................................................................GGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAG.........................................................................................................................................................................................................................................................................................................................................................................................................ATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGCGATGGAGGAAGCTCTGCATCACCGTCCAATGCTTCAACTGGTTCTAGAAGCAGTGATTTGTCTACTGCGCAGTCAGGAAATTCAAGTGCCACTACTGTTTCAGGAGTCACTTCTTCAACTCTGGGACCAAATCATGGAAATAGGCTACCGCAGGGGGCAAATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E318044" ref_strand="+" ref_description="SGN-E318044 [cTOA-30-P6]">
      <seq>cccattttcctatctttcctcagttgggaatgtttttagatttcgatcactgaaccccaactatctaaagtttcaatctttttcatcactcaaaattatggatgttatctgggttcttccgtacatcatttgcccagatcttaatattctttgacctagcttaacaggccagagtctctgtggacctcagcaaaaaaacaagaacaaaggtttactgcacctccccggttcttttttctggttgacagctagcatggatagacctttcagattgatgaaagttctgttttgagggtgtttaaatcagtaaaacattacgaccagaagatcatattttcaagtgatgatcaaacagatacttaataggctccctagaaagccttccaagtcagcagaaaatcgcgatggaggaagctctgcatcaccgtccaatgcttcaactggttctagaagcagtgatttgtctactgcgcagtcaggaaattcaagtgccactactgtttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="58941" stop="57301"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58641" g_stop="58543" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58542" i_stop="58460" i_length="83">
            <donor d_prob="0.821" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58459" g_stop="58298" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="261" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58297" i_stop="57844" i_length="454">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57843" g_stop="57601" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="262" r_stop="504" r_length="243" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E318044" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E318044" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58641" e_stop="58543"/>
          <exon e_start="58459" e_stop="58298"/>
          <exon e_start="57843" e_stop="57601"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTATGTAAGCATTAACAACTCATTTTATGTCTGAGTGCTGTTTCTTTTTAATCTTTATTGACTCACTTCTTTTGTGATTCTTTGAAGGGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAGGTAAGATTTTTCAGTTTCTGATTCAGATTATTTGATGCTTGTTTGATTATTAAAATAACTTTCTGCATCAGGGTTTCGCCTTTTGCACTGTTTAATTCACCAAGAATGCACCTTTTTTTAATTGCTAAGTGGAAGTGCACAGAGAACTCTCTTAGTGTGGAGTTGTTTATAATACAAATTACTTACTTTACCAAGTGAAAGAAAGAAAAGGGATTAGGTCACAAATGTTGATCTTTTTAGCTCTTTTCTCCATGATGAAAAAGAAGTTTGAACTTTTCTAGATTTCTTCATTTTACTTGCCTTTTTGTTATTGTTTTTCAGATGAAAAAGAGTTTTACTGGTCTAGACAGGTAGTCTGTGGTCTCATTTGTTTATTGGTTTAGGGGGTGGCAGATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGCGATGGAGGAAGCTCTGCATCACCGTCCAATGCTTCAACTGGTTCTAGAAGCAGTGATTTGTCTACTGCGCAGTCAGGAAATTCAAGTGCCACTACTGTTTC</genome_strand>
        <mrna_strand>CCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTAT...................................................................................GGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGCGATGGAGGAAGCTCTGCATCACCGTCCAATGCTTCAACTGGTTCTAGAAGCAGTGATTTGTCTACTGCGCAGTCAGGAAATTCAAGTGCCACTACTGTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E481255" ref_strand="+" ref_description="SGN-E481255 [cSTD-17-F21]">
      <seq>ccatcacaccccttttcctatctttcctcagttggggatgttttcagatttagatcactgaaccccaactctctaaagtttcaatcttttcatcactcaaaattatactattaatggatgttatctgggttccgtacattatttgcccagatcttaatattctttgacctagcttaacagccccgagtctttgtggacctcaacaaaagaacaagaacaaaggtttactgcacctcccccattctttttctggttgacagcacgcatggatagatgaaaaggagttttactcatctagacgggtagtctgtggtttcatttgtgtattggtttagggggtggcacataaggatttggggtggatgagatccacactggttcgctaacaattgattatgctgcttagacctttcagattgatgaaagttctgttttgagagtgtctcaatcagtaaaacattacgaccagaagatcatattttcaagtgatgatcaaactaatactcaatatgctccctcgaaagccttccaagtcaacagaatatcgtgatggaggaagctctgcatcaccgacaaatgcttcaactagttctagaagcagtgatttgtctactgcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="58949" stop="57333"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58649" g_stop="58543" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="106" r_length="106" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58542" i_stop="58469" i_length="74">
            <donor d_prob="0.821" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58468" g_stop="58298" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="273" r_length="167" r_score="0.895"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58297" i_stop="57977" i_length="321">
            <donor d_prob="0.995" d_score="0.90"/>
            <acceptor a_prob="0.992" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57976" g_stop="57633" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="617" r_length="344" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E481255" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>622</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E481255" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58649" e_stop="58543"/>
          <exon e_start="58468" e_stop="58298"/>
          <exon e_start="57976" e_stop="57633"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATCACACCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTATGTAAGCATTAACAACTCATTTTATGTCTGAGTGCTGTTTCTTTTTAATCTTTATTGACTCACTTCTTTTGTGATTCTTTGAAGGGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAGGTAAGATTTTTCAGTTTCTGATTCAGATTATTTGATGCTTGTTTGATTATTAAAATAACTTTCTGCATCAGGGTTTCGCCTTTTGCACTGTTTAATTCACCAAGAATGCACCTTTTTTTAATTGCTAAGTGGAAGTGCACAGAGAACTCTCTTAGTGTGGAGTTGTTTATAATACAAATTACTTACTTTACCAAGTGAAAGAAAGAAAAGGGATTAGGTCACAAATGTTGATCTTTTTAGCTCTTTTCTCCATGATGAAAAAGAAGTTTGAACTTTTCTAGATTTCTTCATTTTACTTGCCTTTTTGTTATTGTTTTTCAGATGAAAAAGAGTTTTACTGGTCTAGACAGGTAGTCTGTGGTCTCATTTGTTTATTGGTTTAGGGGGTGGCAGATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGCGATGGAGGAAGCTCTGCATCACCGTCCAATGCTTCAACTGGTTCTAGAAGCAGTGATTTGTCTACTGCG</genome_strand>
        <mrna_strand>CCATCACACCCCTTTTCCTATCTTTCCTCAGTTGGGGATGTTTTCAGATTTAGATCACTGAACCCCAACTCTCTAAAGTTTCAATC-TTTTCATCACTCAAAATTAT..........................................................................ACTATTAATGGATGTTATCTGGG---TTCCGTACATTATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGCCCCGAGTCTTTGTGGACCTCAACAAAAGAACAAGAACAAAGGTTTACTGCACCTCCCCCATTC-TTTTTCTGGTTGACAGCACGCATGGATAG.................................................................................................................................................................................................................................................................................................................................ATGAAAAGGAGTTTTACTCATCTAGACGGGTAGTCTGTGGTTTCATTTGTGTATTGGTTTAGGGGGTGGCACATAAGGATTTGGGGTGGATGAGATCCACACTGGTTCGCTAACAATTGATTATGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGAGTGTCTCAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACTAATACTCAATATGCTCCCTCGAAAGCCTTCCAAGTCAACAGAATATCGTGATGGAGGAAGCTCTGCATCACCGACAAATGCTTCAACTAGTTCTAGAAGCAGTGATTTGTCTACTGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E438611" ref_strand="+" ref_description="SGN-E438611 [cSTA-8-L6]">
      <seq>cagatttcgatcactgaaccccaactctctaaagtttctatcttctcatcactcaaaattatactactattggatgttatctgggttccgtacattatttacccagatcttaatattctttgacctagcttaactgccccgagtctttgtggacctcagcaaaaaaacaagaacaaaggtttactgcacctcccccattctttttctggttgacagaaagcatggatagatgaaaaggagttttactcgtctagacaggtagtctgtggtttcatttgtgtattggtttaggggttggtagataaggatttggggtggatgagatccgcactggtttgctaacaattgattatgctgcttagacctttcagattgatgaaagttctgttttgagagtgtttcaatcagtaaaacattacgaccagaagatcatattttcaagtgatgatcaaacaaatactcaataggctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="58904" stop="57434"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58605" g_stop="58543" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.921"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58542" i_stop="58469" i_length="74">
            <donor d_prob="0.821" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.78"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58468" g_stop="58298" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="229" r_length="167" r_score="0.883"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58297" i_stop="57977" i_length="321">
            <donor d_prob="0.995" d_score="0.90"/>
            <acceptor a_prob="0.992" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57976" g_stop="57734" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="472" r_length="243" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E438611" ref_strand="+">
        <total_alignment_score>0.916</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E438611" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58605" e_stop="58543"/>
          <exon e_start="58468" e_stop="58298"/>
          <exon e_start="57976" e_stop="57734"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTATGTAAGCATTAACAACTCATTTTATGTCTGAGTGCTGTTTCTTTTTAATCTTTATTGACTCACTTCTTTTGTGATTCTTTGAAGGGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAGGTAAGATTTTTCAGTTTCTGATTCAGATTATTTGATGCTTGTTTGATTATTAAAATAACTTTCTGCATCAGGGTTTCGCCTTTTGCACTGTTTAATTCACCAAGAATGCACCTTTTTTTAATTGCTAAGTGGAAGTGCACAGAGAACTCTCTTAGTGTGGAGTTGTTTATAATACAAATTACTTACTTTACCAAGTGAAAGAAAGAAAAGGGATTAGGTCACAAATGTTGATCTTTTTAGCTCTTTTCTCCATGATGAAAAAGAAGTTTGAACTTTTCTAGATTTCTTCATTTTACTTGCCTTTTTGTTATTGTTTTTCAGATGAAAAAGAGTTTTACTGGTCTAGACAGGTAGTCTGTGGTCTCATTTGTTTATTGGTTTAGGGGGTGGCAGATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATAGGCTCC</genome_strand>
        <mrna_strand>CAGATTTCGATCACTGAACCCCAACTCTCTAAAGTTTCTATC-TTCTCATCACTCAAAATTAT..........................................................................ACTACTATTGGATGTTATCTGGG---TTCCGTACATTATTTACCCAGATCTTAATATTCTTTGACCTAGCTTAACTGCCCCGAGTCTTTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCCATTC-TTTTTCTGGTTGACAGAAAGCATGGATAG.................................................................................................................................................................................................................................................................................................................................ATGAAAAGGAGTTTTACTCGTCTAGACAGGTAGTCTGTGGTTTCATTTGTGTATTGGTTTAGGGGTTGGTAGATAAGGATTTGGGGTGGATGAGATCCGCACTGGTTTGCTAACAATTGATTATGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGAGTGTTTCAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAAATACTCAATAGGCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E367159" ref_strand="+" ref_description="SGN-E367159 [cLPT-5-F12]">
      <seq>aaaaatcaaaacaaaaaaaagaagaataattgtagctaaccaaacacatcaaaaacaacaaccagagattggttttgtctaatccatcacaccccttttcctatcttttctcagttgggaatgtttttagatttcgatcactgaaccccaactatctaaagtttcaatctttttcatcactcaaaattatggatgttatctgggttcttccgtacatcatttgcccagatcttaatattctttgacctagcttaacagcccagagtctctgtggacctcagcaaaaaaaacaagaacaaaggtttactgcacctcccccgttcttttttctggttgacagctagcatggatagatgaaaaagagttttactcgtctagacaggtagtctctggtctcatttgtttattggtttaaggggtggcagataaggatttggggtggatgagatccgcactggcttgctaacaattcaatttgctgcttagacctttcagattgatgaaagttctgttttgagggtgtttaaatcagtaaaacattacgaccagaagatcatattttcaagtgatgatcaaacagatacttaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="59040" stop="57440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58747" g_stop="58543" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="190" r_length="190" r_score="0.917"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58542" i_stop="58460" i_length="83">
            <donor d_prob="0.821" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58459" g_stop="58298" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="353" r_length="163" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58297" i_stop="57977" i_length="321">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57976" g_stop="57740" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="590" r_length="237" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E367159" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.024" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E367159" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58747" e_stop="58543"/>
          <exon e_start="58459" e_stop="58298"/>
          <exon e_start="57976" e_stop="57740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATCAAAACAAAAAAAAAAAAGAAGAATAATTGTAGCTAACCAAACACATCAAAAACAACAACCAGAGATTGGTTTTTGTCTATTTTTGTCTAATCCATCACACCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTATGTAAGCATTAACAACTCATTTTATGTCTGAGTGCTGTTTCTTTTTAATCTTTATTGACTCACTTCTTTTGTGATTCTTTGAAGGGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGC-AAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAGGTAAGATTTTTCAGTTTCTGATTCAGATTATTTGATGCTTGTTTGATTATTAAAATAACTTTCTGCATCAGGGTTTCGCCTTTTGCACTGTTTAATTCACCAAGAATGCACCTTTTTTTAATTGCTAAGTGGAAGTGCACAGAGAACTCTCTTAGTGTGGAGTTGTTTATAATACAAATTACTTACTTTACCAAGTGAAAGAAAGAAAAGGGATTAGGTCACAAATGTTGATCTTTTTAGCTCTTTTCTCCATGATGAAAAAGAAGTTTGAACTTTTCTAGATTTCTTCATTTTACTTGCCTTTTTGTTATTGTTTTTCAGATGAAAAAGAGTTTTACTGGTCTAGACAGGTAGTCTGTGGTCTCATTTGTTTATTGGTTTAGGGGGTGGCAGATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATA</genome_strand>
        <mrna_strand>AAAAATCAAAAC--A-AAAA-AAAGAAGAATAATTGTAGCTAACCAAACACATCAAAAACAACAACCAGAGATT-G-----G-----TTTTGTCTAATCCATCACACCCCTTTTCCTATCTTTTCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTAT...................................................................................GGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGCCCAGAGTCTCTGTGGACCTCAGCAAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCCGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAG.................................................................................................................................................................................................................................................................................................................................ATGAAAAAGAGTTTTACTCGTCTAGACAGGTAGTCTCTGGTCTCATTTGTTTATTGGTTTAAGGGGTGGCAGATAAGGATTTGGGGTGGATGAGATCCGCACTGGCTTGCTAACAATTCAATTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E296941" ref_strand="+" ref_description="SGN-E296941 [cLET-26-F15]">
      <seq>aaaagaagaataattgtagctaaccaaacacatcaaaaacaacaaccagagattggtttttgtctatttttgtctaatccatcacacccattttcctatctttcctcagttgggaatgtttttagatttcgatcactgaaccccaactatctaaagtttcaatctttttcatcactcaaaattatggatgttatctgggttcttccgtacatcatttgcccagatcttaatattctttgacctagcttaacaggccagagtctctgtggacctcagcaaaaaaacaagaacaaaggtttactgcacctccccggttcttttttctggttgacagctagcatggatagggggtggcagataaggattcggggtggatgagatctgcactggcttgctaacaattcattttgctgcttagacctttcagattgatgaaagttctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="59027" stop="57519"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58727" g_stop="58543" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58542" i_stop="58460" i_length="83">
            <donor d_prob="0.821" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58459" g_stop="58298" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="347" r_length="162" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="58297" i_stop="57915" i_length="383">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="57914" g_stop="57819" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="443" r_length="96" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E296941" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>443</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E296941" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58727" e_stop="58543"/>
          <exon e_start="58459" e_stop="58298"/>
          <exon e_start="57914" e_stop="57819"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAAGAATAATTGTAGCTAACCAAACACATCAAAAACAACAACCAGAGATTGGTTTTTGTCTATTTTTGTCTAATCCATCACACCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTATGTAAGCATTAACAACTCATTTTATGTCTGAGTGCTGTTTCTTTTTAATCTTTATTGACTCACTTCTTTTGTGATTCTTTGAAGGGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAGGTAAGATTTTTCAGTTTCTGATTCAGATTATTTGATGCTTGTTTGATTATTAAAATAACTTTCTGCATCAGGGTTTCGCCTTTTGCACTGTTTAATTCACCAAGAATGCACCTTTTTTTAATTGCTAAGTGGAAGTGCACAGAGAACTCTCTTAGTGTGGAGTTGTTTATAATACAAATTACTTACTTTACCAAGTGAAAGAAAGAAAAGGGATTAGGTCACAAATGTTGATCTTTTTAGCTCTTTTCTCCATGATGAAAAAGAAGTTTGAACTTTTCTAGATTTCTTCATTTTACTTGCCTTTTTGTTATTGTTTTTCAGATGAAAAAGAGTTTTACTGGTCTAGACAGGTAGTCTGTGGTCTCATTTGTTTATTGGTTTAGGGGGTGGCAGATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTG</genome_strand>
        <mrna_strand>AAAAGAAGAATAATTGTAGCTAACCAAACACATCAAAAACAACAACCAGAGATTGGTTTTTGTCTATTTTTGTCTAATCCATCACACCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTAT...................................................................................GGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAG...............................................................................................................................................................................................................................................................................................................................................................................................GGGGTGGCAGATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E259209" ref_strand="+" ref_description="SGN-E259209 [cLEG-43-B9]">
      <seq>aataattgtagctaaccaaacacatcaaaaacaacaaccagagattggtttttgtctatttttgtctaatccatcacacccattttcctatctttcctcagttgggaatgtttttagatttcgatcactgaaccccaactatctaaagtttcaatctttttcatcactcaaaattatggatgttatctgggttcttccgtacatcatttgcccagatcttaatattctttgacctagcttaacaggccagagtctctgtggacctcagcaaaaaaacaagaacaaaggtttactgcacctccccggttcttttttctggttgacagctagcatggataggtaagatttttcagtttctgattcagattatttgatgcttgtttgattattaaaataactttctgcatcagggtttcgccttttgcactgtttaattcaccaagaatgcacctttttttaattgctaagtggaagtgcacagagaactctcttagtgtggagttgtttataatacaaattacttactttaccaagtgaaagaaagaaaagggattacgtcacaaatgttgatctttttagctcttttctccatgatgaaaaagaagtttgaacttttctagatttcttcattttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="59019" stop="57702"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58719" g_stop="58543" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58542" i_stop="58460" i_length="83">
            <donor d_prob="0.821" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58459" g_stop="58002" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="635" r_length="458" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E259209" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E259209" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58719" e_stop="58543"/>
          <exon e_start="58459" e_stop="58002"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAATTGTAGCTAACCAAACACATCAAAAACAACAACCAGAGATTGGTTTTTGTCTATTTTTGTCTAATCCATCACACCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTATGTAAGCATTAACAACTCATTTTATGTCTGAGTGCTGTTTCTTTTTAATCTTTATTGACTCACTTCTTTTGTGATTCTTTGAAGGGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAGGTAAGATTTTTCAGTTTCTGATTCAGATTATTTGATGCTTGTTTGATTATTAAAATAACTTTCTGCATCAGGGTTTCGCCTTTTGCACTGTTTAATTCACCAAGAATGCACCTTTTTTTAATTGCTAAGTGGAAGTGCACAGAGAACTCTCTTAGTGTGGAGTTGTTTATAATACAAATTACTTACTTTACCAAGTGAAAGAAAGAAAAGGGATTAGGTCACAAATGTTGATCTTTTTAGCTCTTTTCTCCATGATGAAAAAGAAGTTTGAACTTTTCTAGATTTCTTCATTTTAC</genome_strand>
        <mrna_strand>AATAATTGTAGCTAACCAAACACATCAAAAACAACAACCAGAGATTGGTTTTTGTCTATTTTTGTCTAATCCATCACACCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTAT...................................................................................GGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAGGTAAGATTTTTCAGTTTCTGATTCAGATTATTTGATGCTTGTTTGATTATTAAAATAACTTTCTGCATCAGGGTTTCGCCTTTTGCACTGTTTAATTCACCAAGAATGCACCTTTTTTTAATTGCTAAGTGGAAGTGCACAGAGAACTCTCTTAGTGTGGAGTTGTTTATAATACAAATTACTTACTTTACCAAGTGAAAGAAAGAAAAGGGATTACGTCACAAATGTTGATCTTTTTAGCTCTTTTCTCCATGATGAAAAAGAAGTTTGAACTTTTCTAGATTTCTTCATTTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E259192" ref_strand="+" ref_description="SGN-E259192 [cLEG-43-M15]">
      <seq>aataattgtagctaaccaaacacatcaaaaacaacaaccagagattggtttttgtctatttttgtctaatccatcacacccattttcctatctttcctcagttgggaatgtttttagatttcgatcactgaaccccaactatctaaagtttcaatctttttcatcactcaaaattatggatgttatctgggttcttccgtacatcatttgcccagatcttaatattctttgacctagcttaacaggccagagtctctgtggacctcagcaaaaaaacaagaacaaaggtttactgcacctccccggttcttttttctggttgacagctagcatggataggtaagatttttcagtttctgattcagattatttgatgcttgtttgattattaaaataactttctgcatcagggtttcgccttttgcactgtttaattcaccaagaatgcacctttttttaattgctaagtggaagtgcacagagaactctcttagtgtggagttgtttataatacaaattacttactttaccaagtgaaagaaagaaaagggattaggtcacaaatgttgatctttttagctcttttctccatgatgaaaaagaagtttgaacttttctagatttcttcattttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="59019" stop="57702"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58719" g_stop="58543" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58542" i_stop="58460" i_length="83">
            <donor d_prob="0.821" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58459" g_stop="58002" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="635" r_length="458" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E259192" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E259192" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58719" e_stop="58543"/>
          <exon e_start="58459" e_stop="58002"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAATTGTAGCTAACCAAACACATCAAAAACAACAACCAGAGATTGGTTTTTGTCTATTTTTGTCTAATCCATCACACCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTATGTAAGCATTAACAACTCATTTTATGTCTGAGTGCTGTTTCTTTTTAATCTTTATTGACTCACTTCTTTTGTGATTCTTTGAAGGGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAGGTAAGATTTTTCAGTTTCTGATTCAGATTATTTGATGCTTGTTTGATTATTAAAATAACTTTCTGCATCAGGGTTTCGCCTTTTGCACTGTTTAATTCACCAAGAATGCACCTTTTTTTAATTGCTAAGTGGAAGTGCACAGAGAACTCTCTTAGTGTGGAGTTGTTTATAATACAAATTACTTACTTTACCAAGTGAAAGAAAGAAAAGGGATTAGGTCACAAATGTTGATCTTTTTAGCTCTTTTCTCCATGATGAAAAAGAAGTTTGAACTTTTCTAGATTTCTTCATTTTAC</genome_strand>
        <mrna_strand>AATAATTGTAGCTAACCAAACACATCAAAAACAACAACCAGAGATTGGTTTTTGTCTATTTTTGTCTAATCCATCACACCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTAT...................................................................................GGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAGGTAAGATTTTTCAGTTTCTGATTCAGATTATTTGATGCTTGTTTGATTATTAAAATAACTTTCTGCATCAGGGTTTCGCCTTTTGCACTGTTTAATTCACCAAGAATGCACCTTTTTTTAATTGCTAAGTGGAAGTGCACAGAGAACTCTCTTAGTGTGGAGTTGTTTATAATACAAATTACTTACTTTACCAAGTGAAAGAAAGAAAAGGGATTAGGTCACAAATGTTGATCTTTTTAGCTCTTTTCTCCATGATGAAAAAGAAGTTTGAACTTTTCTAGATTTCTTCATTTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E252118" ref_strand="+" ref_description="SGN-E252118 [cLEG-8-M19]">
      <seq>catcacacccattttcctatctttcctagttgggaatgtttttagatttcgatcactgaaccccaactatctaaagtttcaatctttttcatcactcaaaattatggatgttatctgggttcttccgtacatcatttgcccagatcttaatattctttgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="58948" stop="58104"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58648" g_stop="58543" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58542" i_stop="58460" i_length="83">
            <donor d_prob="0.821" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="58459" g_stop="58404" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="161" r_length="56" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E252118" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>162</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E252118" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58648" e_stop="58543"/>
          <exon e_start="58459" e_stop="58404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCACACCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTATGTAAGCATTAACAACTCATTTTATGTCTGAGTGCTGTTTCTTTTTAATCTTTATTGACTCACTTCTTTTGTGATTCTTTGAAGGGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGAC</genome_strand>
        <mrna_strand>CATCACACCCATTTTCCTATCTTTCCT-AGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTAT...................................................................................GGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E745535" ref_strand="+" ref_description="SGN-E745535 [GI|47105919]">
      <seq>ggagacggagagttgaagcaaaattgagtgaggaaatagccaaagaaagagtggaatgacgatggaccgagagaaggagagagaggttgagttggaaagtgcaatgtacaccaactgtttgttactagggttggatccatccatcatcggaatcggagccggaaacggcacacctcgcgtcggactttttcgtcattcgaaccctaaattgggcgaacagcttctctactttatattatcttctctcagaggtcctactcaatccgctaaggatttcgataaggtctggccaatttttgattccgcacaatctcgcgattttcgtaaggttgtacaagggattataagtgagctggaatctcaaggggcactgcctagaagtaattcgagggtctcatctcttgccacatgctgtggaccaagatttgttgaacttctatggcaactttcattgcatgctttgagggaggttcataggcgaatgtttgctgctgatgttgtttctaaccccttgcctgcatcattaacagatgtagctttctcacatgcagccacactacttcctgtaaccaaggctaggattgctcttgaaagaaggaggtttttgagtaatgcagaaacagcagttcgtagacaggccatgtggtctaatttggctcatgaattgacagctgaatttcgaggcctttgtgctgaggaggcttatttgcagcaagaactggaaaagctgcaggatgtgagaaataaagtaaagctggaaggtgaactgtgggatgaacttgtatcaagctcaagtcagaactcacacatggttcaaagagctactcgtttgtgggactctttgctgtctcgcaagaatcaacatgaaattctcgcctctggcccgatagaagatcttattgctcatcgtgagcataggtatcgcatctctggttcagctttgctcactgctatggatcaaagccctgtagctccaccaccccatttggcgtcttcacatcaagctgtaagatcacaagcagacgtggatagagaaaagcgtgcaaggagttcagattcttctcatattcaagtagacgataacacattttctcgagttgatgagagagttgctagaggccatcctactgttgatatagcagaagttttgaggcgttggacacatgccctacaacgtgttcataagcaatcccttcaactggcaaaagcaaatgatggagagggtccagagcttttgaggagttcacatgatggtggtactggtggtcatgcagagtccttggctgcaacccttgccgaacataagcagcacctagcaagtatacaggtgctcataaatcaactgaaggaagtcgctccatccatacagaattcaattttagaacttacagaagaagttagtagtatttcgtccaattcttctagaacagccaattttcagggcagatcacatacccaagcacagagcagtgggagaacattggaacacagggatgatgaggtagctgagatgagctcaagattgtcatccatgcaatttgaaaagacatcagctagtcccactactttgaagctcccacctttgtttagtgtgacgccgaattctttaggaagaggtggtgcacagaagcaacagatctcttcccaaaccagccaaattgaaattatgcctgagaggaagtctctggatcagcaatttctaaataattccttcgataattcgccacaagataatgacacaagctttgttcaaaatctgaagagatctgtcagagaagctgcacttcgctccgaatcttactatcagggatcatctcaagatagtcgttctgatgatagttctgagcactactttgagcctgtctcagggttagggttttctcagcatggagatagggcaaacttgctgagaagaaaaaaattgtttgtgtcagaaccagattcttcatttttagggactggtgcaccggatagtcatatgaacatcaagtctgatggaatacctgacttattacatgatctgcagtctgtggatgactatgatggttttctttcaactatgggttcaaactcttcattttcggatgcacataggtcattttatgatttggaggaagctaaggatcaagtattttctcctcctctgcttatggatgcatcattgttggcagattcatatgaggatttacttgcaccattgtcagaaactgaaactgctttgatggagcattgagataaaacattgggttatgttgctgctcggctttgaagagattgcatggaagcttgtactgccagcctttctgttgttggaataccctcctcatattaacttccgtttgattgtgtgatttcttgtatttttcatgcttccaagtgtctcagcctttatcttttgcatttcatttgactgggaagagcagagagagctgatcgcacattgctcggtaagtgtgaccatggccgagccaagattttgatgtgcttaccctggtcctgtcaatgtgagcttgttcttctgcaggagaccggcaggactgcttcagacagttgtgcgctgtatactgctgggtaaagaaattttatcttgctccccattgatttttttttgtttactctgtaacaattcaatctaaggggagcctcagagtaacggtatagttggttccatgctggttcgagcccattgatggttgcatcaggataggtcgcacacattatattcccttggatccccaagtcccgtgtgatcaccgaatgtgttatatactgtgctgtcctttcttctgtaacaattcaatggatacggtcgaagaagtaatttatctgttcgtttgttctataatatggtatatatctatcaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="66607" stop="60036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66308" g_stop="66038" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="271" r_length="271" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66037" i_stop="65917" i_length="121">
            <donor d_prob="0.700" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65916" g_stop="65860" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="328" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65859" i_stop="65669" i_length="191">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65668" g_stop="65574" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="423" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65573" i_stop="64970" i_length="604">
            <donor d_prob="0.915" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64969" g_stop="64819" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="574" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="64818" i_stop="64507" i_length="312">
            <donor d_prob="0.950" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="64506" g_stop="64381" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="575" r_stop="700" r_length="126" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="64380" i_stop="64266" i_length="115">
            <donor d_prob="0.834" d_score="0.98"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="64265" g_stop="64109" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="701" r_stop="857" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="64108" i_stop="63950" i_length="159">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="63949" g_stop="63889" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="858" r_stop="918" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="63888" i_stop="63808" i_length="81">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.932" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="63807" g_stop="63525" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="919" r_stop="1201" r_length="283" r_score="0.996"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="63524" i_stop="63125" i_length="400">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="63124" g_stop="62999" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1202" r_stop="1327" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="62998" i_stop="62705" i_length="294">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="62704" g_stop="62549" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1328" r_stop="1483" r_length="156" r_score="0.994"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="62548" i_stop="62465" i_length="84">
            <donor d_prob="0.943" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="62464" g_stop="62218" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="1484" r_stop="1730" r_length="247" r_score="0.996"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="62217" i_stop="62141" i_length="77">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="62140" g_stop="61679" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="1731" r_stop="2192" r_length="462" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="61678" i_stop="61009" i_length="670">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="61008" g_stop="60352" g_length="657"/>
          <reference_exon_boundary r_type="cDNA" r_start="2193" r_stop="2849" r_length="657" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2863" polyA_stop="2878"/>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E745535" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>2849</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745535" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66308" e_stop="66038"/>
          <exon e_start="65916" e_stop="65860"/>
          <exon e_start="65668" e_stop="65574"/>
          <exon e_start="64969" e_stop="64819"/>
          <exon e_start="64506" e_stop="64381"/>
          <exon e_start="64265" e_stop="64109"/>
          <exon e_start="63949" e_stop="63889"/>
          <exon e_start="63807" e_stop="63525"/>
          <exon e_start="63124" e_stop="62999"/>
          <exon e_start="62704" e_stop="62549"/>
          <exon e_start="62464" e_stop="62218"/>
          <exon e_start="62140" e_stop="61679"/>
          <exon e_start="61008" e_stop="60352"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGACGGAGAGTTGAAGCAAAATTGAGTGAGGAAATAGCCAAAGAAAGAGTGGAATGACGATGGACCGAGAGAAGGAGAGAGAGGTTGAGTTGGAAAGTGCAATGTACACCAACTGTTTGTTACTAGGGTTGGATCCATCCATCATCGGAATCGGAGCCGGAAACGGCACACCTCGCGTCGGACTTTTTCGTCATTCGAACCCTAAATTGGGCGAACAGCTTCTCTACTTTATATTATCTTCTCTCAGAGGTCCTACTCAATCCGCTAAGGTGATTGCTACTTTTCGACCTGTCAATGTGAACTTCTTAGCTCACCTGTGATTCAGTCTTATACTTCCTCTGTTACCATTGGATGTTTTTGTTTTGTTTGCTCACTGCAATATCTTTTCAGGATTTCGATAAGGTCTGGCCAATTTTTGATTCCGCACAATCTCGCGATTTTCGTAAGGTAATTATATACATGATTGTTCCTAAGTCGATAGGTCTTTTCACGCTGAATAATTGAACTGGACGCACACAATCTGTATAGATTTGTCTAGAATTGGACAGTACTAATTCTAAAAAAAAAAAATAGATTTGTCTAGAGTTGGTCTTCTTCTAGTGAAAGGTTGCTTGCTTATTTATTTATGGAAATCTTAGGTTGTACAAGGGATTATAAGTGAGCTGGAATCTCAAGGGGCACTGCCTAGAAGTAATTCGAGGGTCTCATCTCTTGCCACATGCTGTGGACCAAGGTTGGCTCATTGATAGCTGTTTAATTCATATACCGCTTTGGTTGTGGTTCATTTTAATTATTTGGAGCTTTCATTTGATTTTTCCGTATCTTGGTATTATGTCTTTTCTCTCTGTTTTATGTGTTGCAAATGGTAGTCCAGTGCAAGTTGATTCAACTCAGCAAGTAATTTGATCAGTGGTTAGTAATTGCATTATTGAAAATAGTTGTCCTACAGATACCATAGCTTCTGTAAGGGAGTAGATAAAAATTTTGAAGTTCGAATTGCACTAGGGTCATGAGCAAGTTCTTGCACCTGTGTCGCACTGAAATGCCCTCATTCCAGCCCATCCTAATTAAATGTCTTAATGAATGAGTGTTAATGAATTTTCTGGTGCCTTTGTCTAATTATTGAATTTCTGAAAACTTTTGGAGAAGGAAATGATTCCTCTTGTGAGTGGTAAAGCTAAATAGTAGATAGTACCTGCTTCGTTTTCCGTTGACACACTCATGTAAGTTTGATTCATACCCTATTAGGTGAAGTTTGCATGCTCATGTGTCAAGAGTAAACATTATAGCCACTATATTACTTAGTATTGATTATTTATTTAACATGTTTGCTGCAGATTTGTTGAACTTCTATGGCAACTTTCATTGCATGCTTTGAGGGAGGTTCATAGGCGAATGTTTGCTGCTGATGTTGTTTCTAACCCCTTGCCTGCATCATTAACAGATGTAGCTTTCTCACATGCAGCCACACTACTTCCTGTAACCAAGGTGTCTCTTCTGATTCCTTCCATCTGCTAGGCTTTTAAACAGGCACATTTTTGATATCAGGGGGTTCTTGTGACCTTGAATCTAACAGCTTTATCACCCGTAGCTAAGGTTTTGACTCGATTTTCTTTCCTAATGTGGAAGCTATTACTTGTATCACATTGGCAAAGTAGCTTACCAGTAGTCTATGCTTAGGCATTGTCTGTTTTCTTTGCTAGTCCCGAAGCTTTAATTCGTATGTATTGTAGTCAATATCACGATTCACATGAGAATTATTTCTAGTGGATGGATCTAATTGCTCTTCTATGTGAATAGGCTAGGATTGCTCTTGAAAGAAGGAGGTTTTTGAGTAATGCAGAAACAGCAGTTCGTAGACAGGCCATGTGGTCTAATTTGGCTCATGAATTGACAGCTGAATTTCGAGGCCTTTGTGCTGAAGAGGTGAAAGAAAATCTTGTCACCTTTCTTTGAGGACTTGGAGTTGGATTCTTAGCCCCTTATCCACAGCGGTAAATAATTGTTTCTGAGGATCCATCTTTGATCTTCTTTGTCTCAGGCTTATTTGCAGCAAGAACTGGAAAAGCTGCAGGATGTGAGAAATAAAGTAAAGCTGGAAGGTGAACTGTGGGATGAACTTGTATCAAGCTCAAGTCAGAACTCACACATGGTTCAAAGAGCTACTCGTTTGTGGGACTCTTTGCTGTCTCGCAAGAGTGCGTTCAATCACTATCTCACTTGTCAATTATATCCTAATAATACAATGCTATAAGCACGCTTTTGCAGAGTGCTTCTCTCACTGATCTTGCAATAAGTGTACTAGAGTTTTGTATACCTGGCACTTACTTGTATTATGTATATATATATGTATACAGATCAACATGAAATTCTCGCCTCTGGCCCGATAGAAGATCTTATTGCTCATCGTGAGCATAGGTATGATCACTTTCCATTTTCTCTTCGGTTTTAAAACCAGGCCGTGCCTTCATATTTTATTTTTTTAAAAAAATCATTTAGGTATCGCATCTCTGGTTCAGCTTTGCTCACTGCTATGGATCAAAGCCCTGTAGCTCCACCACCCCATTTGGCGTCTTCACATCAAGCTGTAAGATCACAAGCAGACGTGGATAGAGAAAAGCATGCAAGGAGTTCAGATTCTTCTCATATTCAAGTAGACGATAACACATTTTCTCGAGTTGATGAGAGAGTTGCTAGAGGCCATCCTACTGTTGATATAGCAGAAGTTTTGAGGCGTTGGACACATGCCCTACAACGTGTTCATAAGCAATCCCTTCAACTGGTATGATGATTCCTTTGACTCAAGATTCTATACGTCTTGTCAGAACTCTTTTTTTCTCTCCATGAATTTCAAGCTTAAAGTATCGCCTGGCAGTTTACATAAATGTTTGGAACAGTTCTCTTGCTATGTGGATTCAAGTGGTTCAGGTGAAGCAAAACCTTTTTAGGGTGGGCCTAAATATGGTGCAAGGACTTTCTACATCTATGGTTTTGCGATGTCACCGAGCACCATGTCTTCTCCTATGTTGGACTTTAGAAGTAGTTAATAGGAGAATGTCAATGTGTTACACAATTGAATACAAGGGTTTACATCTGTTTTTACACTTTAGAATTTATTTAACAATTTGAATGTCTTTGATTTTAATTTCATGCTTTCTTTCTGGTACTACTAATTCTTGCAGGCAAAAGCAAATGATGGAGAGGGTCCAGAGCTTTTGAGGAGTTCACATGATGGTGGTACTGGTGGTCATGCAGAGTCCTTGGCTGCAACCCTTGCCGAACATAAGCAGCACCTAGCAAGTATACAGGTCTGATATTCAGTCTAATTTGGTTGCACTTATGAACTATTATACATGGACTCTGGTGAGAGTATTATTATCAATGCATATAATTAAAAGAAAGCAAGGTAGTTGTTAAGCATCCAATGTGTGGCCTAGTGTTCAATGAAATGGATTGAGAACCACGAGGTCTCATGTTCAAATCCCAACAAGACAAAAAAACACTATGTGATTTCTTCCTGGCATACTCATATATAACTAAATTATTGAAAATATTACAATTATACTGTTGAAAGTTTGTGATGTGAATTCATTGATCTCTAGGTGCTCATAAATCAACTGAAGGAAGTCGCTCCATCCATACAGAATTCAATTTTAGAACTTACAGAAGAAGTTAGTAGTATTTCGTCCAATTCTTCTAGAACAGCCAATTTTCAGGGCAGATCACATTCCCAAGCACAGAGCAGTGGGAGAACATTGGTACTGTTTTGTGAAGCATTTTGTAAGACTTCCTTTTACCTTTTTGAAACAATAGAAAAACCTAAACTACAATATTTACTACAGGAACACAGGGATGATGAGGTAGCTGAGATGAGCTCAAGATTGTCATCCATGCAATTTGAAAAGACATCAGCTAGTCCCACTACTTTGAAGCTCCCACCTTTGTTTAGTGTGACGCCGAATTCTTTAGGAAAAGGTGGTGCACAGAAGCAACAGATCTCTTCCCAAACCAGCCAAATTGAAATTATGCCTGAGAGGAAGTCTCTGGATCAGCAATTTCTAAATAATTCCTTCGATAATTCGCCACAAGGTTTTTATCCTGCCTTCTGAATGCATACATTGATTTCTTAACTGCTATATGCATAAACTTATTATGAATTTTTGCAGATAATGACACAAGCTTTGTTCAAAATCTGAAGAGATCTGTCAGAGAAGCTGCACTTCGCTCCGAATCTTACTATCAGGGATCATCTCAAGATAGTCGTTCTGATGATAGTTCTGAGCACTACTTTGAGCCTGTCTCAGGGTTAGGGTTTTCTCAGCATGGAGATAGGGCAAACTTGCTGAGAAGAAAAAAATTGTTTGTGTCAGAACCAGATTCTTCATTTTTAGGGACTGGTGCACCGGATAGTCATATGAACATCAAGTCTGATGGAATACCTGACTTATTACATGATCTGCAGTCTGTGGATGACTATGATGGTTTTCTTTCAACTATGGGTTCAAACTCTTCATTTTCGGATGCACATAGGTCATTTTATGATTTGGAGGAAGCTAAGGATCAAGTATTTTCTCCTCCTCTGCTTATGGATGCATCATTGTTGGCAGATTCATATGAGGATTTACTTGGTATGTTTGTTCCAACCTTTTACCTGGTAGATCTATTTGACAATTTTCTTTTAGTTTTGAATCCATTTTTCTACAGTTCCCAATGCTATTCTCTGATGCTTAAACCTTCAGGCTATATCCCTAATCCCCGAGTCCTTTAATGGTGGTTCCATGCCATAACTGATAACATGGAGTGATGATGTTTTGAAATAATTTCCTAATCTGGACATTGCGTGGTGTCTAAACATGTTCCTTGTTAAATTCTTTCTTGATAAATAACCCTCTTTGGTCTCTTTCCTTTGAGAGAGAGCTTTGTCGAGAATGAGTCGCATTTTATTGCTCTCTTCGCAGGGCATATTTATTTAGGCTGTTCTTCTTATTTGTGTGGAAGTTTTAAACCTTGGTTTTCTTGGAAAGCCATGCTCTGTTCTTTGCTCTTGATCCACAAAGGCAACTTGTTTGTCTAAGTAGAAAAAAATCATTAGCAATACCACATGCATTTTTGACAAGCTTCCGGTTCCTCATTGATACTTACTATTGAAACGGAACGGTTTGTTTTTGTACCTGTCAGTAAAAGCCCTTTGTAGGACCCATCAGCATTTGCTTATGATATCTTTTGCAATGCCTTATTTATTGCTCTACCAGGCTATCGATAATTTAATGTGTTCTAATAGAAGTCATACTGTTGCAGCACCATTGTCAGAAACTGAAACTGCTTTGATGGAGCATTGAGATAAAACATTGGGTTATGTTGCTGCTCGGCTTTGAAGAGATTGCATGGAAGCTTGTACTGCCAGCCTTTCTGTTGTTGGAATACCCTCCTCATATTAACTTCCGTTTGATTGTGTGATTTCTTGTATTTTTCATGCTTCCAAGTGTCTCAGCCTTTATCTTTTGCATTTCATTTGACTGGGAAGAGCAGAGAGAGCTGATCGCACATTGCTCGGTAAGTGTGACCATGGCCGAGCCAAGATTTTGATGTGCTTACCCTGGTCCTGTCAATGTGAGCTTGTTCTTCTGCAGGAGACCGGCAGGACTGCTTCAGACAGTTGTGCGCTGTATACTGCTGGGTAAAGAAATTTTATCTTGCTCCCCATTGATTTTTTTTTGTTTACTCTGTAACAATTCAATCTAAGGGGAGCCTCAGAGTAACGGTATAGTTGGTTCCATGCTGGTTCGAGCCCATTGATGGTTGCATCAGGATAGGTCGCACACATTATATTCCCTTGGATCCCCAAGTCCCGTGTGATCACCGAATGTGTTATATACTGTGCTGTCCTTTCTTCTGTAACAATTCAATGGATACGGTCGAAGAAGTAATTTATCTGTTCGTTTGTTCTATAATATG</genome_strand>
        <mrna_strand>GGAGACGGAGAGTTGAAGCAAAATTGAGTGAGGAAATAGCCAAAGAAAGAGTGGAATGACGATGGACCGAGAGAAGGAGAGAGAGGTTGAGTTGGAAAGTGCAATGTACACCAACTGTTTGTTACTAGGGTTGGATCCATCCATCATCGGAATCGGAGCCGGAAACGGCACACCTCGCGTCGGACTTTTTCGTCATTCGAACCCTAAATTGGGCGAACAGCTTCTCTACTTTATATTATCTTCTCTCAGAGGTCCTACTCAATCCGCTAAG.........................................................................................................................GATTTCGATAAGGTCTGGCCAATTTTTGATTCCGCACAATCTCGCGATTTTCGTAAG...............................................................................................................................................................................................GTTGTACAAGGGATTATAAGTGAGCTGGAATCTCAAGGGGCACTGCCTAGAAGTAATTCGAGGGTCTCATCTCTTGCCACATGCTGTGGACCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTTGAACTTCTATGGCAACTTTCATTGCATGCTTTGAGGGAGGTTCATAGGCGAATGTTTGCTGCTGATGTTGTTTCTAACCCCTTGCCTGCATCATTAACAGATGTAGCTTTCTCACATGCAGCCACACTACTTCCTGTAACCAAG........................................................................................................................................................................................................................................................................................................................GCTAGGATTGCTCTTGAAAGAAGGAGGTTTTTGAGTAATGCAGAAACAGCAGTTCGTAGACAGGCCATGTGGTCTAATTTGGCTCATGAATTGACAGCTGAATTTCGAGGCCTTTGTGCTGAGGAG...................................................................................................................GCTTATTTGCAGCAAGAACTGGAAAAGCTGCAGGATGTGAGAAATAAAGTAAAGCTGGAAGGTGAACTGTGGGATGAACTTGTATCAAGCTCAAGTCAGAACTCACACATGGTTCAAAGAGCTACTCGTTTGTGGGACTCTTTGCTGTCTCGCAAGA...............................................................................................................................................................ATCAACATGAAATTCTCGCCTCTGGCCCGATAGAAGATCTTATTGCTCATCGTGAGCATAG.................................................................................GTATCGCATCTCTGGTTCAGCTTTGCTCACTGCTATGGATCAAAGCCCTGTAGCTCCACCACCCCATTTGGCGTCTTCACATCAAGCTGTAAGATCACAAGCAGACGTGGATAGAGAAAAGCGTGCAAGGAGTTCAGATTCTTCTCATATTCAAGTAGACGATAACACATTTTCTCGAGTTGATGAGAGAGTTGCTAGAGGCCATCCTACTGTTGATATAGCAGAAGTTTTGAGGCGTTGGACACATGCCCTACAACGTGTTCATAAGCAATCCCTTCAACTG................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAAGCAAATGATGGAGAGGGTCCAGAGCTTTTGAGGAGTTCACATGATGGTGGTACTGGTGGTCATGCAGAGTCCTTGGCTGCAACCCTTGCCGAACATAAGCAGCACCTAGCAAGTATACAG......................................................................................................................................................................................................................................................................................................GTGCTCATAAATCAACTGAAGGAAGTCGCTCCATCCATACAGAATTCAATTTTAGAACTTACAGAAGAAGTTAGTAGTATTTCGTCCAATTCTTCTAGAACAGCCAATTTTCAGGGCAGATCACATACCCAAGCACAGAGCAGTGGGAGAACATTG....................................................................................GAACACAGGGATGATGAGGTAGCTGAGATGAGCTCAAGATTGTCATCCATGCAATTTGAAAAGACATCAGCTAGTCCCACTACTTTGAAGCTCCCACCTTTGTTTAGTGTGACGCCGAATTCTTTAGGAAGAGGTGGTGCACAGAAGCAACAGATCTCTTCCCAAACCAGCCAAATTGAAATTATGCCTGAGAGGAAGTCTCTGGATCAGCAATTTCTAAATAATTCCTTCGATAATTCGCCACAAG.............................................................................ATAATGACACAAGCTTTGTTCAAAATCTGAAGAGATCTGTCAGAGAAGCTGCACTTCGCTCCGAATCTTACTATCAGGGATCATCTCAAGATAGTCGTTCTGATGATAGTTCTGAGCACTACTTTGAGCCTGTCTCAGGGTTAGGGTTTTCTCAGCATGGAGATAGGGCAAACTTGCTGAGAAGAAAAAAATTGTTTGTGTCAGAACCAGATTCTTCATTTTTAGGGACTGGTGCACCGGATAGTCATATGAACATCAAGTCTGATGGAATACCTGACTTATTACATGATCTGCAGTCTGTGGATGACTATGATGGTTTTCTTTCAACTATGGGTTCAAACTCTTCATTTTCGGATGCACATAGGTCATTTTATGATTTGGAGGAAGCTAAGGATCAAGTATTTTCTCCTCCTCTGCTTATGGATGCATCATTGTTGGCAGATTCATATGAGGATTTACTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCATTGTCAGAAACTGAAACTGCTTTGATGGAGCATTGAGATAAAACATTGGGTTATGTTGCTGCTCGGCTTTGAAGAGATTGCATGGAAGCTTGTACTGCCAGCCTTTCTGTTGTTGGAATACCCTCCTCATATTAACTTCCGTTTGATTGTGTGATTTCTTGTATTTTTCATGCTTCCAAGTGTCTCAGCCTTTATCTTTTGCATTTCATTTGACTGGGAAGAGCAGAGAGAGCTGATCGCACATTGCTCGGTAAGTGTGACCATGGCCGAGCCAAGATTTTGATGTGCTTACCCTGGTCCTGTCAATGTGAGCTTGTTCTTCTGCAGGAGACCGGCAGGACTGCTTCAGACAGTTGTGCGCTGTATACTGCTGGGTAAAGAAATTTTATCTTGCTCCCCATTGATTTTTTTTTGTTTACTCTGTAACAATTCAATCTAAGGGGAGCCTCAGAGTAACGGTATAGTTGGTTCCATGCTGGTTCGAGCCCATTGATGGTTGCATCAGGATAGGTCGCACACATTATATTCCCTTGGATCCCCAAGTCCCGTGTGATCACCGAATGTGTTATATACTGTGCTGTCCTTTCTTCTGTAACAATTCAATGGATACGGTCGAAGAAGTAATTTATCTGTTCGTTTGTTCTATAATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E604031" ref_strand="+" ref_description="SGN-E604031 [67221]">
      <seq>atgaacatcaagtctgatggaatacctgacttattaaatgatctgcagtctgtggatgactatgatggttttctttcaactatgggttcaaactcttcattttcagatgcacataggtcattttatgatttggaggaagctcaggatcaagtattttcacctcctctgcttatggatgcatcattgttagcagattcatatgaggatttacttgcaccattgtcagaaactgaaactgctttgatggagcattgagataaaacattgggtaatgttgctgctcggctttgaaaagattgcttggaagcttgtactgccagcctttttgttgttggaataccgtcctcgtactaacttccgtttgattgtgtgatttcttgtatttttcatgcttcaagtgtctcagcctttatcttttgcatttcatttgactgggaagagcagagggaactgatcatcagaacattgctcagtaagcgtgaccatggccgagccaagattttgatgtggttaccctggtcctgtcaacatgagcttgttcttctgcaggagatcggcaggactgcttcagacagttgtgggctgtatactgattgggtaaagaaattttatcttgctcctgattgattctttttgtttactgtgtaacaatttcgatctaagtgtgggggggaagccttgggagtaacatttataagttggttccatgctggctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="62192" stop="60221"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61892" g_stop="61679" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="214" r_length="214" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61678" i_stop="61009" i_length="670">
            <donor d_prob="0.979" d_score="0.98"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61008" g_stop="60564" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="663" r_length="449" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E604031" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E604031" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61892" e_stop="61679"/>
          <exon e_start="61008" e_stop="60564"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAACATCAAGTCTGATGGAATACCTGACTTATTACATGATCTGCAGTCTGTGGATGACTATGATGGTTTTCTTTCAACTATGGGTTCAAACTCTTCATTTTCGGATGCACATAGGTCATTTTATGATTTGGAGGAAGCTAAGGATCAAGTATTTTCTCCTCCTCTGCTTATGGATGCATCATTGTTGGCAGATTCATATGAGGATTTACTTGGTATGTTTGTTCCAACCTTTTACCTGGTAGATCTATTTGACAATTTTCTTTTAGTTTTGAATCCATTTTTCTACAGTTCCCAATGCTATTCTCTGATGCTTAAACCTTCAGGCTATATCCCTAATCCCCGAGTCCTTTAATGGTGGTTCCATGCCATAACTGATAACATGGAGTGATGATGTTTTGAAATAATTTCCTAATCTGGACATTGCGTGGTGTCTAAACATGTTCCTTGTTAAATTCTTTCTTGATAAATAACCCTCTTTGGTCTCTTTCCTTTGAGAGAGAGCTTTGTCGAGAATGAGTCGCATTTTATTGCTCTCTTCGCAGGGCATATTTATTTAGGCTGTTCTTCTTATTTGTGTGGAAGTTTTAAACCTTGGTTTTCTTGGAAAGCCATGCTCTGTTCTTTGCTCTTGATCCACAAAGGCAACTTGTTTGTCTAAGTAGAAAAAAATCATTAGCAATACCACATGCATTTTTGACAAGCTTCCGGTTCCTCATTGATACTTACTATTGAAACGGAACGGTTTGTTTTTGTACCTGTCAGTAAAAGCCCTTTGTAGGACCCATCAGCATTTGCTTATGATATCTTTTGCAATGCCTTATTTATTGCTCTACCAGGCTATCGATAATTTAATGTGTTCTAATAGAAGTCATACTGTTGCAGCACCATTGTCAGAAACTGAAACTGCTTTGATGGAGCATTGAGATAAAACATTGGGTTATGTTGCTGCTCGGCTTTGAAGAGATTGCATGGAAGCTTGTACTGCCAGCCTTTCTGTTGTTGGAATACCCTCCTCATATTAACTTCCGTTTGATTGTGTGATTTCTTGTATTTTTCATGCTTCCAAGTGTCTCAGCCTTTATCTTTTGCATTTCATTTGACTGGGAAGAGCAGAGAGAGCTG---ATC-GCACATTGCTCGGTAAGTGTGACCATGGCCGAGCCAAGATTTTGATGTGCTTACCCTGGTCCTGTCAATGTGAGCTTGTTCTTCTGCAGGAGACCGGCAGGACTGCTTCAGACAGTTGTGCGCTGTATACTG-CTGGGTAAAGAAATTTTATCTTGCTCCCCATTGATTTTTTTTTGTTTACTCTGTAACAA-TTCAATCTAAG</genome_strand>
        <mrna_strand>ATGAACATCAAGTCTGATGGAATACCTGACTTATTAAATGATCTGCAGTCTGTGGATGACTATGATGGTTTTCTTTCAACTATGGGTTCAAACTCTTCATTTTCAGATGCACATAGGTCATTTTATGATTTGGAGGAAGCTCAGGATCAAGTATTTTCACCTCCTCTGCTTATGGATGCATCATTGTTAGCAGATTCATATGAGGATTTACTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCATTGTCAGAAACTGAAACTGCTTTGATGGAGCATTGAGATAAAACATTGGGTAATGTTGCTGCTCGGCTTTGAAAAGATTGCTTGGAAGCTTGTACTGCCAGCCTTTTTGTTGTTGGAATACCGTCCTCGTACTAACTTCCGTTTGATTGTGTGATTTCTTGTATTTTTCATGCTT-CAAGTGTCTCAGCCTTTATCTTTTGCATTTCATTTGACTGGGAAGAGCAGAGGGAACTGATCATCAGAACATTGCTCAGTAAGCGTGACCATGGCCGAGCCAAGATTTTGATGTGGTTACCCTGGTCCTGTCAACATGAGCTTGTTCTTCTGCAGGAGATCGGCAGGACTGCTTCAGACAGTTGTGGGCTGTATACTGATTGGGTAAAGAAATTTTATCTTGCTCCTGATTGA-TTCTTTTTGTTTACTGTGTAACAATTTCGATCTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E474084" ref_strand="+" ref_description="SGN-E474084 [cSTB-34-N3]">
      <seq>ctgcacttcgctcccaatcttaccatccgggatcatctcaagacagtcgttctgatgatagttctgagcactactttgagcctgtctcagggttagggttttctcagcatggagatagggcaagcttgctgagaagaaaaaaattgtttgtgtcagaaccagattcttcatttttagggactggtgcaccagatagtcatatgaacatcaagtctgatggaatacctgacttattaaatgatctgcagtctgtggatgactatgatggttttctttcaactatgggttcaaactcttcattttcagatgcacataggtcattttatgatttggaggaagctcaggatcaagtattttcacctcctctgcttatggatgcatcattgttagcagattcatatgaggatttacttgcaccattgtcagaaactgaaactgctttgatggagcattgagataaaacattgggtaatgttgctgctcggctttgaaaagattgcttggaagcttgtactgccagcctttttgttgttggaataccgtcctcgtactaacttccgtttgattgtgtgatttcttgtatttttcatgcttcaagtgtctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="62392" stop="60518"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62092" g_stop="61679" g_length="414"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="414" r_length="414" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61678" i_stop="61009" i_length="670">
            <donor d_prob="0.979" d_score="0.98"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="61008" g_stop="60818" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="604" r_length="190" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E474084" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>605</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E474084" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62092" e_stop="61679"/>
          <exon e_start="61008" e_stop="60818"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCACTTCGCTCCGAATCTTACTATCAGGGATCATCTCAAGATAGTCGTTCTGATGATAGTTCTGAGCACTACTTTGAGCCTGTCTCAGGGTTAGGGTTTTCTCAGCATGGAGATAGGGCAAACTTGCTGAGAAGAAAAAAATTGTTTGTGTCAGAACCAGATTCTTCATTTTTAGGGACTGGTGCACCGGATAGTCATATGAACATCAAGTCTGATGGAATACCTGACTTATTACATGATCTGCAGTCTGTGGATGACTATGATGGTTTTCTTTCAACTATGGGTTCAAACTCTTCATTTTCGGATGCACATAGGTCATTTTATGATTTGGAGGAAGCTAAGGATCAAGTATTTTCTCCTCCTCTGCTTATGGATGCATCATTGTTGGCAGATTCATATGAGGATTTACTTGGTATGTTTGTTCCAACCTTTTACCTGGTAGATCTATTTGACAATTTTCTTTTAGTTTTGAATCCATTTTTCTACAGTTCCCAATGCTATTCTCTGATGCTTAAACCTTCAGGCTATATCCCTAATCCCCGAGTCCTTTAATGGTGGTTCCATGCCATAACTGATAACATGGAGTGATGATGTTTTGAAATAATTTCCTAATCTGGACATTGCGTGGTGTCTAAACATGTTCCTTGTTAAATTCTTTCTTGATAAATAACCCTCTTTGGTCTCTTTCCTTTGAGAGAGAGCTTTGTCGAGAATGAGTCGCATTTTATTGCTCTCTTCGCAGGGCATATTTATTTAGGCTGTTCTTCTTATTTGTGTGGAAGTTTTAAACCTTGGTTTTCTTGGAAAGCCATGCTCTGTTCTTTGCTCTTGATCCACAAAGGCAACTTGTTTGTCTAAGTAGAAAAAAATCATTAGCAATACCACATGCATTTTTGACAAGCTTCCGGTTCCTCATTGATACTTACTATTGAAACGGAACGGTTTGTTTTTGTACCTGTCAGTAAAAGCCCTTTGTAGGACCCATCAGCATTTGCTTATGATATCTTTTGCAATGCCTTATTTATTGCTCTACCAGGCTATCGATAATTTAATGTGTTCTAATAGAAGTCATACTGTTGCAGCACCATTGTCAGAAACTGAAACTGCTTTGATGGAGCATTGAGATAAAACATTGGGTTATGTTGCTGCTCGGCTTTGAAGAGATTGCATGGAAGCTTGTACTGCCAGCCTTTCTGTTGTTGGAATACCCTCCTCATATTAACTTCCGTTTGATTGTGTGATTTCTTGTATTTTTCATGCTTCCAAGTGTCTC</genome_strand>
        <mrna_strand>CTGCACTTCGCTCCCAATCTTACCATCCGGGATCATCTCAAGACAGTCGTTCTGATGATAGTTCTGAGCACTACTTTGAGCCTGTCTCAGGGTTAGGGTTTTCTCAGCATGGAGATAGGGCAAGCTTGCTGAGAAGAAAAAAATTGTTTGTGTCAGAACCAGATTCTTCATTTTTAGGGACTGGTGCACCAGATAGTCATATGAACATCAAGTCTGATGGAATACCTGACTTATTAAATGATCTGCAGTCTGTGGATGACTATGATGGTTTTCTTTCAACTATGGGTTCAAACTCTTCATTTTCAGATGCACATAGGTCATTTTATGATTTGGAGGAAGCTCAGGATCAAGTATTTTCACCTCCTCTGCTTATGGATGCATCATTGTTAGCAGATTCATATGAGGATTTACTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCATTGTCAGAAACTGAAACTGCTTTGATGGAGCATTGAGATAAAACATTGGGTAATGTTGCTGCTCGGCTTTGAAAAGATTGCTTGGAAGCTTGTACTGCCAGCCTTTTTGTTGTTGGAATACCGTCCTCGTACTAACTTCCGTTTGATTGTGTGATTTCTTGTATTTTTCATGCTT-CAAGTGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E202312" ref_strand="+" ref_description="SGN-E202312 [cLEC-6-M10]">
      <seq>caaattgaaattatgcctgagaggaagtctctggatcagcaatttctaaataattccttcgataattcgccacaagataatgacacaagctttgttcaaaatctgaagagatctgtcagagaagctgcacttcgctccgaatcttactatcagggatcatctcaagatagtcgttctgatgatagttctgagcactactttgagcctgtctcagggttagggttttctcagcatggagatagggcaaacttgctgagaagaaaaaaattgtttgtgtcagaaccagattcttcatttttagggactggtgcaccggatagtcatatgaacatcaagtctgatggaatacctgacttattacatgatctgcagtctgtggatgactatgatggttttctttcaactatgggttcaaactcttcattttcggatgcacataggtcattttatgatttggaggaagctaaggatcaagtattttctcctcctctgcttatggatgcatcattgttggcagattcatatgaggatttacttgcaccattgtcagaaactgaaactgctttgatggagcattgagataaaacattgggttatgttgctgctcggctttgaagagattgcatggaagcttgtactgccagcctttctgttgttggaataccctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="62593" stop="60579"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62293" g_stop="62218" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62217" i_stop="62141" i_length="77">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62140" g_stop="61679" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="538" r_length="462" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="61678" i_stop="61009" i_length="670">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.699" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="61008" g_stop="60879" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="668" r_length="130" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E202312" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202312" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62293" e_stop="62218"/>
          <exon e_start="62140" e_stop="61679"/>
          <exon e_start="61008" e_stop="60879"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATTGAAATTATGCCTGAGAGGAAGTCTCTGGATCAGCAATTTCTAAATAATTCCTTCGATAATTCGCCACAAGGTTTTTATCCTGCCTTCTGAATGCATACATTGATTTCTTAACTGCTATATGCATAAACTTATTATGAATTTTTGCAGATAATGACACAAGCTTTGTTCAAAATCTGAAGAGATCTGTCAGAGAAGCTGCACTTCGCTCCGAATCTTACTATCAGGGATCATCTCAAGATAGTCGTTCTGATGATAGTTCTGAGCACTACTTTGAGCCTGTCTCAGGGTTAGGGTTTTCTCAGCATGGAGATAGGGCAAACTTGCTGAGAAGAAAAAAATTGTTTGTGTCAGAACCAGATTCTTCATTTTTAGGGACTGGTGCACCGGATAGTCATATGAACATCAAGTCTGATGGAATACCTGACTTATTACATGATCTGCAGTCTGTGGATGACTATGATGGTTTTCTTTCAACTATGGGTTCAAACTCTTCATTTTCGGATGCACATAGGTCATTTTATGATTTGGAGGAAGCTAAGGATCAAGTATTTTCTCCTCCTCTGCTTATGGATGCATCATTGTTGGCAGATTCATATGAGGATTTACTTGGTATGTTTGTTCCAACCTTTTACCTGGTAGATCTATTTGACAATTTTCTTTTAGTTTTGAATCCATTTTTCTACAGTTCCCAATGCTATTCTCTGATGCTTAAACCTTCAGGCTATATCCCTAATCCCCGAGTCCTTTAATGGTGGTTCCATGCCATAACTGATAACATGGAGTGATGATGTTTTGAAATAATTTCCTAATCTGGACATTGCGTGGTGTCTAAACATGTTCCTTGTTAAATTCTTTCTTGATAAATAACCCTCTTTGGTCTCTTTCCTTTGAGAGAGAGCTTTGTCGAGAATGAGTCGCATTTTATTGCTCTCTTCGCAGGGCATATTTATTTAGGCTGTTCTTCTTATTTGTGTGGAAGTTTTAAACCTTGGTTTTCTTGGAAAGCCATGCTCTGTTCTTTGCTCTTGATCCACAAAGGCAACTTGTTTGTCTAAGTAGAAAAAAATCATTAGCAATACCACATGCATTTTTGACAAGCTTCCGGTTCCTCATTGATACTTACTATTGAAACGGAACGGTTTGTTTTTGTACCTGTCAGTAAAAGCCCTTTGTAGGACCCATCAGCATTTGCTTATGATATCTTTTGCAATGCCTTATTTATTGCTCTACCAGGCTATCGATAATTTAATGTGTTCTAATAGAAGTCATACTGTTGCAGCACCATTGTCAGAAACTGAAACTGCTTTGATGGAGCATTGAGATAAAACATTGGGTTATGTTGCTGCTCGGCTTTGAAGAGATTGCATGGAAGCTTGTACTGCCAGCCTTTCTGTTGTTGGAATACCCTC</genome_strand>
        <mrna_strand>CAAATTGAAATTATGCCTGAGAGGAAGTCTCTGGATCAGCAATTTCTAAATAATTCCTTCGATAATTCGCCACAAG.............................................................................ATAATGACACAAGCTTTGTTCAAAATCTGAAGAGATCTGTCAGAGAAGCTGCACTTCGCTCCGAATCTTACTATCAGGGATCATCTCAAGATAGTCGTTCTGATGATAGTTCTGAGCACTACTTTGAGCCTGTCTCAGGGTTAGGGTTTTCTCAGCATGGAGATAGGGCAAACTTGCTGAGAAGAAAAAAATTGTTTGTGTCAGAACCAGATTCTTCATTTTTAGGGACTGGTGCACCGGATAGTCATATGAACATCAAGTCTGATGGAATACCTGACTTATTACATGATCTGCAGTCTGTGGATGACTATGATGGTTTTCTTTCAACTATGGGTTCAAACTCTTCATTTTCGGATGCACATAGGTCATTTTATGATTTGGAGGAAGCTAAGGATCAAGTATTTTCTCCTCCTCTGCTTATGGATGCATCATTGTTGGCAGATTCATATGAGGATTTACTTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCATTGTCAGAAACTGAAACTGCTTTGATGGAGCATTGAGATAAAACATTGGGTTATGTTGCTGCTCGGCTTTGAAGAGATTGCATGGAAGCTTGTACTGCCAGCCTTTCTGTTGTTGGAATACCCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E470347" ref_strand="+" ref_description="SGN-E470347 [cSTB-17-L2]">
      <seq>ctgcaacccttgccgaacataagcagcacctagcaagtatacaggtgctcataaatcaactgaaggaagttgctccatccatacagaattcaattttagaacttacagaagaagttagtagtatttcgtccaattcttctagaacagccaattttcagggtagatcacattcaccggtccaagcacagagcagtgggagaacattggaacatatcgatgatgaggtagctgagatgagctcaaggttgtcatccatgcaatttgaaaagacatcagctagtcccactactttgaagctcccacctttgtttagtgtaacaccaaattcttcaggaaaaggtggtgcacagaaacgacagatctcggcccaaaccagccaaattgaaaatatgcctgagaggaagtctctggatcagcaatttttaaataattccttcgataatctgccacaagataatgacacaagctttgttcaaaatctgaagagatctgtcagagaagctgcacttcgctcccaatcttaccatcagggatcatctcaagacagtcgttctgatgatagttctgaacactactttgagcctgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="63342" stop="61707"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63042" g_stop="62999" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62998" i_stop="62705" i_length="294">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62704" g_stop="62549" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="206" r_length="162" r_score="0.910"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62548" i_stop="62465" i_length="84">
            <donor d_prob="0.943" d_score="0.70"/>
            <acceptor a_prob="0.999" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62464" g_stop="62218" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="453" r_length="247" r_score="0.935"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="62217" i_stop="62141" i_length="77">
            <donor d_prob="0.988" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="62140" g_stop="62007" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="587" r_length="134" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E470347" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E470347" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63042" e_stop="62999"/>
          <exon e_start="62704" e_stop="62549"/>
          <exon e_start="62464" e_stop="62218"/>
          <exon e_start="62140" e_stop="62007"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCAACCCTTGCCGAACATAAGCAGCACCTAGCAAGTATACAGGTCTGATATTCAGTCTAATTTGGTTGCACTTATGAACTATTATACATGGACTCTGGTGAGAGTATTATTATCAATGCATATAATTAAAAGAAAGCAAGGTAGTTGTTAAGCATCCAATGTGTGGCCTAGTGTTCAATGAAATGGATTGAGAACCACGAGGTCTCATGTTCAAATCCCAACAAGACAAAAAAACACTATGTGATTTCTTCCTGGCATACTCATATATAACTAAATTATTGAAAATATTACAATTATACTGTTGAAAGTTTGTGATGTGAATTCATTGATCTCTAGGTGCTCATAAATCAACTGAAGGAAGTCGCTCCATCCATACAGAATTCAATTTTAGAACTTACAGAAGAAGTTAGTAGTATTTCGTCCAATTCTTCTAGAACAGCCAATTTTCAGGGCAGATCACATT---C---CCAAGCACAGAGCAGTGGGAGAACATTGGTACTGTTTTGTGAAGCATTTTGTAAGACTTCCTTTTACCTTTTTGAAACAATAGAAAAACCTAAACTACAATATTTACTACAGGAACACAGGGATGATGAGGTAGCTGAGATGAGCTCAAGATTGTCATCCATGCAATTTGAAAAGACATCAGCTAGTCCCACTACTTTGAAGCTCCCACCTTTGTTTAGTGTGACGCCGAATTCTTTAGGAAAAGGTGGTGCACAGAAGCAACAGATCTCTTCCCAAACCAGCCAAATTGAAATTATGCCTGAGAGGAAGTCTCTGGATCAGCAATTTCTAAATAATTCCTTCGATAATTCGCCACAAGGTTTTTATCCTGCCTTCTGAATGCATACATTGATTTCTTAACTGCTATATGCATAAACTTATTATGAATTTTTGCAGATAATGACACAAGCTTTGTTCAAAATCTGAAGAGATCTGTCAGAGAAGCTGCACTTCGCTCCGAATCTTACTATCAGGGATCATCTCAAGATAGTCGTTCTGATGATAGTTCTGAGCACTACTTTGAGCCTGTC</genome_strand>
        <mrna_strand>CTGCAACCCTTGCCGAACATAAGCAGCACCTAGCAAGTATACAG......................................................................................................................................................................................................................................................................................................GTGCTCATAAATCAACTGAAGGAAGTTGCTCCATCCATACAGAATTCAATTTTAGAACTTACAGAAGAAGTTAGTAGTATTTCGTCCAATTCTTCTAGAACAGCCAATTTTCAGGGTAGATCACATTCACCGGTCCAAGCACAGAGCAGTGGGAGAACATTG....................................................................................GAACATATCGATGATGAGGTAGCTGAGATGAGCTCAAGGTTGTCATCCATGCAATTTGAAAAGACATCAGCTAGTCCCACTACTTTGAAGCTCCCACCTTTGTTTAGTGTAACACCAAATTCTTCAGGAAAAGGTGGTGCACAGAAACGACAGATCTCGGCCCAAACCAGCCAAATTGAAAATATGCCTGAGAGGAAGTCTCTGGATCAGCAATTTTTAAATAATTCCTTCGATAATCTGCCACAAG.............................................................................ATAATGACACAAGCTTTGTTCAAAATCTGAAGAGATCTGTCAGAGAAGCTGCACTTCGCTCCCAATCTTACCATCAGGGATCATCTCAAGACAGTCGTTCTGATGATAGTTCTGAACACTACTTTGAGCCTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E246359" ref_strand="+" ref_description="SGN-E246359 [cLEF-52-E12]">
      <seq>aaaagcaaatgatggagagggtccagagcttttgaggaggtcacatgatggtggtactggtggtcatgcacagtccttggctgcaacccttgccgaacataagcagcacctagcaagtatacaggtgctcataaatcaactgaaggaagtcgctccatccatacagaattcaattttagaacttacagaagaagttagtagtatttcgtccaattcttctagaacagccaattttcagggcagatcacattcccaagcacagagcagtgggagaacattggtactgttttgtgaagcattttgtgagacttccttttacctttttgaaacaatagaaaaacctaaactacaatatttactacaggaacacagggatgatgaggtagctgagatgagctcaagattgtcatccatgcaatttgaaaagacatcagctagtcccactactttgaagctcccacctttgttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="63422" stop="62059"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63122" g_stop="62999" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="124" r_length="124" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62998" i_stop="62705" i_length="294">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62704" g_stop="62359" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="470" r_length="346" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E246359" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>470</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246359" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63122" e_stop="62999"/>
          <exon e_start="62704" e_stop="62359"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGCAAATGATGGAGAGGGTCCAGAGCTTTTGAGGAGTTCACATGATGGTGGTACTGGTGGTCATGCAGAGTCCTTGGCTGCAACCCTTGCCGAACATAAGCAGCACCTAGCAAGTATACAGGTCTGATATTCAGTCTAATTTGGTTGCACTTATGAACTATTATACATGGACTCTGGTGAGAGTATTATTATCAATGCATATAATTAAAAGAAAGCAAGGTAGTTGTTAAGCATCCAATGTGTGGCCTAGTGTTCAATGAAATGGATTGAGAACCACGAGGTCTCATGTTCAAATCCCAACAAGACAAAAAAACACTATGTGATTTCTTCCTGGCATACTCATATATAACTAAATTATTGAAAATATTACAATTATACTGTTGAAAGTTTGTGATGTGAATTCATTGATCTCTAGGTGCTCATAAATCAACTGAAGGAAGTCGCTCCATCCATACAGAATTCAATTTTAGAACTTACAGAAGAAGTTAGTAGTATTTCGTCCAATTCTTCTAGAACAGCCAATTTTCAGGGCAGATCACATTCCCAAGCACAGAGCAGTGGGAGAACATTGGTACTGTTTTGTGAAGCATTTTGTAAGACTTCCTTTTACCTTTTTGAAACAATAGAAAAACCTAAACTACAATATTTACTACAGGAACACAGGGATGATGAGGTAGCTGAGATGAGCTCAAGATTGTCATCCATGCAATTTGAAAAGACATCAGCTAGTCCCACTACTTTGAAGCTCCCACCTTTGTTTA</genome_strand>
        <mrna_strand>AAAAGCAAATGATGGAGAGGGTCCAGAGCTTTTGAGGAGGTCACATGATGGTGGTACTGGTGGTCATGCACAGTCCTTGGCTGCAACCCTTGCCGAACATAAGCAGCACCTAGCAAGTATACAG......................................................................................................................................................................................................................................................................................................GTGCTCATAAATCAACTGAAGGAAGTCGCTCCATCCATACAGAATTCAATTTTAGAACTTACAGAAGAAGTTAGTAGTATTTCGTCCAATTCTTCTAGAACAGCCAATTTTCAGGGCAGATCACATTCCCAAGCACAGAGCAGTGGGAGAACATTGGTACTGTTTTGTGAAGCATTTTGTGAGACTTCCTTTTACCTTTTTGAAACAATAGAAAAACCTAAACTACAATATTTACTACAGGAACACAGGGATGATGAGGTAGCTGAGATGAGCTCAAGATTGTCATCCATGCAATTTGAAAAGACATCAGCTAGTCCCACTACTTTGAAGCTCCCACCTTTGTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E722301" ref_strand="+" ref_description="SGN-E722301 [FC16DD12]">
      <seq>aggttgatttggaaagtgctatgtacaccaactgtttgttactagggttggatccatccatcatcggaatcggagccggaaacggcacacctcgcgtcggactttttcgtcattctaaccctaaattgggcgaacagcttctctactttatattatcttctctcaaaggtcctactcaatccgctaaggatttcgataaggtctggccaatttttgattccgcacaatctcgcgattttcgtagggttgtacagagggattataagtgagctggaatctcaaggggcactgcctaaaagtaattcgagggtctcatctcttgccacatgctgtggaccaagatttgttgaacttctatggcaactttcattgcatgctttgagggaggttcataggcgaatgtttgctgctgatgttgtttctaaccccttgcctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="-" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="66525" stop="64575"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66225" g_stop="66038" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66037" i_stop="65917" i_length="121">
            <donor d_prob="0.700" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65916" g_stop="65860" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="245" r_length="57" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65859" i_stop="65669" i_length="191">
            <donor d_prob="0.952" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65668" g_stop="65574" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="341" r_length="96" r_score="0.968"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65573" i_stop="64970" i_length="604">
            <donor d_prob="0.915" d_score="0.98"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64969" g_stop="64875" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="436" r_length="95" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="-" ref_id="SGN-E722301" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>435</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E722301" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66225" e_stop="66038"/>
          <exon e_start="65916" e_stop="65860"/>
          <exon e_start="65668" e_stop="65574"/>
          <exon e_start="64969" e_stop="64875"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTTGAGTTGGAAAGTGCAATGTACACCAACTGTTTGTTACTAGGGTTGGATCCATCCATCATCGGAATCGGAGCCGGAAACGGCACACCTCGCGTCGGACTTTTTCGTCATTCGAACCCTAAATTGGGCGAACAGCTTCTCTACTTTATATTATCTTCTCTCAGAGGTCCTACTCAATCCGCTAAGGTGATTGCTACTTTTCGACCTGTCAATGTGAACTTCTTAGCTCACCTGTGATTCAGTCTTATACTTCCTCTGTTACCATTGGATGTTTTTGTTTTGTTTGCTCACTGCAATATCTTTTCAGGATTTCGATAAGGTCTGGCCAATTTTTGATTCCGCACAATCTCGCGATTTTCGTAAGGTAATTATATACATGATTGTTCCTAAGTCGATAGGTCTTTTCACGCTGAATAATTGAACTGGACGCACACAATCTGTATAGATTTGTCTAGAATTGGACAGTACTAATTCTAAAAAAAAAAAATAGATTTGTCTAGAGTTGGTCTTCTTCTAGTGAAAGGTTGCTTGCTTATTTATTTATGGAAATCTTAGGTTGTACA-AGGGATTATAAGTGAGCTGGAATCTCAAGGGGCACTGCCTAGAAGTAATTCGAGGGTCTCATCTCTTGCCACATGCTGTGGACCAAGGTTGGCTCATTGATAGCTGTTTAATTCATATACCGCTTTGGTTGTGGTTCATTTTAATTATTTGGAGCTTTCATTTGATTTTTCCGTATCTTGGTATTATGTCTTTTCTCTCTGTTTTATGTGTTGCAAATGGTAGTCCAGTGCAAGTTGATTCAACTCAGCAAGTAATTTGATCAGTGGTTAGTAATTGCATTATTGAAAATAGTTGTCCTACAGATACCATAGCTTCTGTAAGGGAGTAGATAAAAATTTTGAAGTTCGAATTGCACTAGGGTCATGAGCAAGTTCTTGCACCTGTGTCGCACTGAAATGCCCTCATTCCAGCCCATCCTAATTAAATGTCTTAATGAATGAGTGTTAATGAATTTTCTGGTGCCTTTGTCTAATTATTGAATTTCTGAAAACTTTTGGAGAAGGAAATGATTCCTCTTGTGAGTGGTAAAGCTAAATAGTAGATAGTACCTGCTTCGTTTTCCGTTGACACACTCATGTAAGTTTGATTCATACCCTATTAGGTGAAGTTTGCATGCTCATGTGTCAAGAGTAAACATTATAGCCACTATATTACTTAGTATTGATTATTTATTTAACATGTTTGCTGCAGATTTGTTGAACTTCTATGGCAACTTTCATTGCATGCTTTGAGGGAGGTTCATAGGCGAATGTTTGCTGCTGATGTTGTTTCTAACCCCTTGCCTG</genome_strand>
        <mrna_strand>AGGTTGATTTGGAAAGTGCTATGTACACCAACTGTTTGTTACTAGGGTTGGATCCATCCATCATCGGAATCGGAGCCGGAAACGGCACACCTCGCGTCGGACTTTTTCGTCATTCTAACCCTAAATTGGGCGAACAGCTTCTCTACTTTATATTATCTTCTCTCAAAGGTCCTACTCAATCCGCTAAG.........................................................................................................................GATTTCGATAAGGTCTGGCCAATTTTTGATTCCGCACAATCTCGCGATTTTCGTAGG...............................................................................................................................................................................................GTTGTACAGAGGGATTATAAGTGAGCTGGAATCTCAAGGGGCACTGCCTAAAAGTAATTCGAGGGTCTCATCTCTTGCCACATGCTGTGGACCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTTGAACTTCTATGGCAACTTTCATTGCATGCTTTGAGGGAGGTTCATAGGCGAATGTTTGCTGCTGATGTTGTTTCTAACCCCTTGCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E480176" ref_strand="+" ref_description="SGN-E480176 [cSTD-13-C9]">
      <seq>tgaggaaagagtgtagaggcgaattcttgtttgcttgtgtgggtaatgatagttgattctgcatcagctataaagcgccagagattcaccgtcgttgatccaatggagttggaatcagctaaggcgaagcttgctgctgcaaaagaaaagtttggacgtgaaatccgtgtatttgaaacagcaacagcttcttcagtgcctcctgatgtttccagcaatgtgtcagaaggagcccgaagaacttctatgagttcactccggaggattattatcgacttttgggaactaaaaaagaagcgaagcacttgaagacgaagaaaattcgtgaggcagaagaagctgcgcgcagagcaaggataactaaggctgtaatcagagtacgcttcccggataattatatattggaggccacatttcatccgtcagagacaatcaagagcttacttgaccttcttgtgaaagtgattgctcgccctgaactgcctttctatatctataccactcctnctaagaaagcaataaaagatttttctcaggatttctattctgctggatttattcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="+" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="70447" stop="74421"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70755" g_stop="70856" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="123" r_length="102" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70857" i_stop="72686" i_length="1830">
            <donor d_prob="0.981" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72687" g_stop="72783" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="220" r_length="97" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72784" i_stop="72902" i_length="119">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72903" g_stop="72977" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="297" r_length="77" r_score="0.920"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="72978" i_stop="73301" i_length="324">
            <donor d_prob="0.986" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73302" g_stop="73369" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="365" r_length="68" r_score="0.971"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="73370" i_stop="74051" i_length="682">
            <donor d_prob="0.960" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74052" g_stop="74181" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="495" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="74182" i_stop="74292" i_length="111">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.920" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="74293" g_stop="74360" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="563" r_length="68" r_score="0.897"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="+" ref_id="SGN-E480176" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E480176" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70755" e_stop="70856"/>
          <exon e_start="72687" e_stop="72783"/>
          <exon e_start="72903" e_stop="72977"/>
          <exon e_start="73302" e_stop="73369"/>
          <exon e_start="74052" e_stop="74181"/>
          <exon e_start="74293" e_stop="74360"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTCTTCTTTGCTTGTGTGGGTAATGATAGTTGATTCTGCACCAGCTACAAAGCGCCAGAGATTCACCGCCGTTGATCCGATGGAGTTGGAATCAGCTAAGGTATTCATTTCAATCTCATCTTTCTTTTCTCCTTTCAAGATACCGGTTCGATTTAACTTCTTGTTTTACCCCTTTTTGTGTGACTATTCAGACCAGTTCGCATGTGTTTCTGTGGTTGATTCATGGTGGGAAAAGCCATCTTGTTTGCTATTTTCTTGGTTTTCTTTATTTAGAATCTTGTAGAAAGAAGTTTGTATAAAGACTACTTCCAGGAAAAATCTCAACACAAGAAAGGCGCTAGTTGTATGTGCCTTTTGTTTACCTACATTCCGTTGTTTTAAAGTTGCTGTTTGTTGTTAATCTTTATACCCATTCCATTTGCTTTGAGTTGCTGTTTCTTGTTGATCTTTAAACCCATTCCATTGTTTTAAGAGTTGCTGTTTCTGGTTAATCTTTAAACCCATTCATTGTTTTAGAGTTGCTGCTTCTTGTTAATCTTCAAGCCCGTTCCATTGTTTTAGGTTTGCTGTGTCTTGTTAATCTTTAAACCCATTGACACACGTTCTTAATTATCTGCTTCTTGTTAATACTTAAACCCATTTATACACAATCCATTGTTTAAGAGTTGCTGCATACCTGCTTCTTGTTAGTATTTAAACCTATTTACATACATTTCGTTGTTTTATGTTTCTGTACATGGGAAATGTTGTTAGAACATCACCTTTCTTCCCATTTTATATGATCACTGATTTATCTCTTTGTGCCCATATAACAAATAAAGTGTATGCCCAACTCTTCAGTTTCTCTAGTATTGTATTGAGCAAATCAAGCATACAAGTGTGAAATTCAGGCATGCAAGTATTGCACTTTTTTTTTGTTATATATTTGTAATACACCCCTTATTTTTTTCAAAAATTGAAGCACTTGTAGAGATGTGCATAGGCCATAAAACTTCCGAATTGAACTGTGTTAAAGAATGACGGTTAATGAGTTGGGTGGACTCCTTATAAGGCTGGACAATCCTCCTCCCTTTGAGTTAGCTTTTGGGGTGTGAGTTAGGCCTAAAACCTAATTTCACAAATTGTTAAGGTTTAGCTTGACACATTTGTAATAGCCTGATTTGTATCTAGTAAGGAAAAAAAACAGTTGGGTGAACCTAACATCCAAGTTTATGCAGGGTTCGGGGGCTAGGTCCGCTCTCCAAGTGGTACATACCATGGTTGAAACCCATGACATATAGATCAAATGGAGATAACTTTACTGCTGCTCCAGGTCTCCCCTTCACCTAACAGCAAACAAATTAAAATTTAAAATAAAATAAGAAACTGCTCCGGTGTCACTGGTTATGATGTTGTTGATGATTATGATGATGATGATGTTGTTGTTGCAAACTGCTCTGACAGAGGCGGAGCTAGAATTTTCAATAAAGGGGTTCATAATGTGTAGAAATAGATACCCGAAGGAGGTTCAACATATATATACATATAAATTTATTTTAACCATGTATAAATAATATAATTTCCACTGAACTTAATGCAATGTAGCTCCGCCCCTGGCCCTGAAGGGGAAGACCAAAGATCAGCACTTCCTTAAAATTATTGAACTTGCAGCAGCACTGTGGACGATGAGTTATAGTAAAATTTAACTTGCAGCTGTAAAAGTAAAGAATGATAAAAAAAATCCCATACAAAATCTGCCAAATTCGGTTCTACTATCTGTCAAGTAAAGTTACCTGTTCCCCTTTGTGTAAATACATCCAGCTTTACTTCAGCTAAACTCTCAAAAAGCTAAAATCATGGAAAGCTCCGTCTGTTACTCAATCATGGAATATATATATATACACACATACATACTGGACTGTAACTTTTCTGTTTTATTGGGTTAATTCAGGCGAAGCTTGCTGCTGCAAAAGAAACGTTTGGACGTGAAATCCGTGTATTTGAAACAGCAACAGCTTCTTCAGTGCCTCCTGATGTTTCCAGCAATGGTACTTCCTACTTGACATAGAAATTATCACTAATACAACTTCCCAAACACGATTCTATGGTCTGTTTTCATATATGCTCATTTTATTTTGCTGTGGCCTTTCTCAATCATCTTCTGCAGTGTCAG-AGGAGCCCGAAG-ACTTCTATGAGTTCACACCAGAGGATTATTATCGACTTTTGGGAACTAAAAAAGAAGGTAAGATACACTTGTATAGACTTTCAGATGAAAAATGGCTTCAAGTATTTGCTAAAGTGAAATTTCTAGCTGACCTCTAACAGAAGAACAAAAAAACATGTCAATTAGTTGTCTGTCGATTTATTTGACAAATTACACTAGAACTCCAGACTCTATTATTTTTCTTTTATGCTTGCGCCTTGGGTATATTCACCGTGTCTTCCACATTTTTACCTTCTTCAATGGATCTTGTTTATTATTATAGATCTGTAGAAATGTATACAGGAATTTGGTTATTTTAATGATTCTGCTTATTCTAACTGGTGTTGGGAAAATTTTCAACAGAGAAGCACTTGAAGACGAAGAAAATTCGTGAGGCAGAAGAAGCTGCACGCAGAGCAAGGATAACTAAGGTTTTCAGTTGATCTTTCTCTCCAGATGATTCTTTCACTTGTATCAAGTTTGAATAATTTGGTGTTAGATTTGGTAAATTAAGTTTTCATCAGTATTGTCAAAGCCACACTTGACATCTGAAGGTTGTTGTTGCTGAACATCTGAGGCTGAAAGTGTCATCTTGGACAGTTTTAGTGCCTAAATAAGGCTCTAAGCGTGCTCCTCATTGTGGATCTATCTTGGAGAGGGCGATAAGAAATAAATGCAGCTGGCGAAATGCTACTTTAATGGTTTAGAAAATATTGTGAATAAATGGTCAGTGATTATGAAGAGGAAATTTTAAGCTTTGCTGAAGAAAACTAGCCAGAAAGATTAATTGGAACTTAAAAAAACAAGTTATGTCCGAATTATTTGTTGAAAAAATAAATTCTGAACTTAATTGACATGACTTTTTATCCATATATGTTAACTGAATTGCAGATTTTTCAAATTTCTTGGCCCATACAACTTCTTGTCTGTGTACTGAGTTTTCTTCATCATACATATATTATCTTATTTGTTTCTTCATCTGCACCTTACTTTGGGGTGTTGGCTTTTATCGCAGCTTTGCACTTAAAGTCCCAGGGGGACCTTGACACTTTTCGACGTCTTTTCATTTGACATTATTGGTTTTTATATCACGTGTTGGTCTGTGTTGTTCAGGCTGTAATCAGAGTACGCTTCCCGGATAATTATATATTGGAGGCCACATTTCATCCGTCAGAGACAATCAAGAGCTTACTTGACCTTCTTGTGAAAGTGATTGCTCACCCTGAACTGCCTTTCTATATCTGTAAGATTATTCTAAACATTTGCTACATTTTACTTTTTCCTATATTTTACTCTCAAGAGCAGTTTATAATAATGGTGTGGCTGAAGATTTAATGCTTGTCCGTTATTTCAGATACCACTCCTCCTAAGAAGCAAATAAAAGATTTTTCCAAGGATTTCTATTCCGCTGGATTTATTCCT</genome_strand>
        <mrna_strand>AATTCTTGTTTGCTTGTGTGGGTAATGATAGTTGATTCTGCATCAGCTATAAAGCGCCAGAGATTCACCGTCGTTGATCCAATGGAGTTGGAATCAGCTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAAGCTTGCTGCTGCAAAAGAAAAGTTTGGACGTGAAATCCGTGTATTTGAAACAGCAACAGCTTCTTCAGTGCCTCCTGATGTTTCCAGCAATG.......................................................................................................................TGTCAGAAGGAGCCCGAAGAACTTCTATGAGTTCACTCCGGAGGATTATTATCGACTTTTGGGAACTAAAAAAGAAG....................................................................................................................................................................................................................................................................................................................................CGAAGCACTTGAAGACGAAGAAAATTCGTGAGGCAGAAGAAGCTGCGCGCAGAGCAAGGATAACTAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTAATCAGAGTACGCTTCCCGGATAATTATATATTGGAGGCCACATTTCATCCGTCAGAGACAATCAAGAGCTTACTTGACCTTCTTGTGAAAGTGATTGCTCGCCCTGAACTGCCTTTCTATATCT...............................................................................................................ATACCACTCCTNCTAAGAAAGCAATAAAAGATTTTTCTCAGGATTTCTATTCTGCTGGATTTATTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E419722" ref_strand="+" ref_description="SGN-E419722 [STM-30-I3]">
      <seq>cttgtttgcttgtgtgggtaatgatagttgattctgcatcagctataaagcgccagagattcaccgtcgttgatccaatggagttggaatcagctaaggcgaagcttgctgctgcaaaagaaaagtttggacgtgaaatccgtgtatttgaaacagcaacagcttcttcagtgcctcctgatgtttccagcaatgtgtcagaggagcccgaagacttctatgagttcactccggaggattattatcgacttttgggaactaaaaaagaagcgaagcacttgaagacgaagaaaattcgtgaggcagaagaagctgcgcgcagagcaaggataactaaggctgtaatcagagtacgcttcccggataattatatattggaggccacatttcatccgtcagagacaatcaagagcttacttgaccttcttgtgaaagtgattgctcgccctgaactgcctttctatatctataccactcctcctaagaagcaaataaaagatttttctcaggatttctattctgctggatttattcctggtgctgttgtttatttctctaacgatctacccaaaggtgatgatggtgctgcagcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="+" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="70459" stop="74421"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70759" g_stop="70856" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70857" i_stop="72686" i_length="1830">
            <donor d_prob="0.981" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72687" g_stop="72783" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="195" r_length="97" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72784" i_stop="72902" i_length="119">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72903" g_stop="72977" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="270" r_length="75" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="72978" i_stop="73301" i_length="324">
            <donor d_prob="0.986" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73302" g_stop="73369" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="338" r_length="68" r_score="0.971"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="73370" i_stop="74051" i_length="682">
            <donor d_prob="0.960" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74052" g_stop="74181" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="468" r_length="130" r_score="0.992"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="74182" i_stop="74292" i_length="111">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.920" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="74293" g_stop="74421" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="594" r_length="126" r_score="0.884"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="+" ref_id="SGN-E419722" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E419722" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70759" e_stop="70856"/>
          <exon e_start="72687" e_stop="72783"/>
          <exon e_start="72903" e_stop="72977"/>
          <exon e_start="73302" e_stop="73369"/>
          <exon e_start="74052" e_stop="74181"/>
          <exon e_start="74293" e_stop="74421"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTTTGCTTGTGTGGGTAATGATAGTTGATTCTGCACCAGCTACAAAGCGCCAGAGATTCACCGCCGTTGATCCGATGGAGTTGGAATCAGCTAAGGTATTCATTTCAATCTCATCTTTCTTTTCTCCTTTCAAGATACCGGTTCGATTTAACTTCTTGTTTTACCCCTTTTTGTGTGACTATTCAGACCAGTTCGCATGTGTTTCTGTGGTTGATTCATGGTGGGAAAAGCCATCTTGTTTGCTATTTTCTTGGTTTTCTTTATTTAGAATCTTGTAGAAAGAAGTTTGTATAAAGACTACTTCCAGGAAAAATCTCAACACAAGAAAGGCGCTAGTTGTATGTGCCTTTTGTTTACCTACATTCCGTTGTTTTAAAGTTGCTGTTTGTTGTTAATCTTTATACCCATTCCATTTGCTTTGAGTTGCTGTTTCTTGTTGATCTTTAAACCCATTCCATTGTTTTAAGAGTTGCTGTTTCTGGTTAATCTTTAAACCCATTCATTGTTTTAGAGTTGCTGCTTCTTGTTAATCTTCAAGCCCGTTCCATTGTTTTAGGTTTGCTGTGTCTTGTTAATCTTTAAACCCATTGACACACGTTCTTAATTATCTGCTTCTTGTTAATACTTAAACCCATTTATACACAATCCATTGTTTAAGAGTTGCTGCATACCTGCTTCTTGTTAGTATTTAAACCTATTTACATACATTTCGTTGTTTTATGTTTCTGTACATGGGAAATGTTGTTAGAACATCACCTTTCTTCCCATTTTATATGATCACTGATTTATCTCTTTGTGCCCATATAACAAATAAAGTGTATGCCCAACTCTTCAGTTTCTCTAGTATTGTATTGAGCAAATCAAGCATACAAGTGTGAAATTCAGGCATGCAAGTATTGCACTTTTTTTTTGTTATATATTTGTAATACACCCCTTATTTTTTTCAAAAATTGAAGCACTTGTAGAGATGTGCATAGGCCATAAAACTTCCGAATTGAACTGTGTTAAAGAATGACGGTTAATGAGTTGGGTGGACTCCTTATAAGGCTGGACAATCCTCCTCCCTTTGAGTTAGCTTTTGGGGTGTGAGTTAGGCCTAAAACCTAATTTCACAAATTGTTAAGGTTTAGCTTGACACATTTGTAATAGCCTGATTTGTATCTAGTAAGGAAAAAAAACAGTTGGGTGAACCTAACATCCAAGTTTATGCAGGGTTCGGGGGCTAGGTCCGCTCTCCAAGTGGTACATACCATGGTTGAAACCCATGACATATAGATCAAATGGAGATAACTTTACTGCTGCTCCAGGTCTCCCCTTCACCTAACAGCAAACAAATTAAAATTTAAAATAAAATAAGAAACTGCTCCGGTGTCACTGGTTATGATGTTGTTGATGATTATGATGATGATGATGTTGTTGTTGCAAACTGCTCTGACAGAGGCGGAGCTAGAATTTTCAATAAAGGGGTTCATAATGTGTAGAAATAGATACCCGAAGGAGGTTCAACATATATATACATATAAATTTATTTTAACCATGTATAAATAATATAATTTCCACTGAACTTAATGCAATGTAGCTCCGCCCCTGGCCCTGAAGGGGAAGACCAAAGATCAGCACTTCCTTAAAATTATTGAACTTGCAGCAGCACTGTGGACGATGAGTTATAGTAAAATTTAACTTGCAGCTGTAAAAGTAAAGAATGATAAAAAAAATCCCATACAAAATCTGCCAAATTCGGTTCTACTATCTGTCAAGTAAAGTTACCTGTTCCCCTTTGTGTAAATACATCCAGCTTTACTTCAGCTAAACTCTCAAAAAGCTAAAATCATGGAAAGCTCCGTCTGTTACTCAATCATGGAATATATATATATACACACATACATACTGGACTGTAACTTTTCTGTTTTATTGGGTTAATTCAGGCGAAGCTTGCTGCTGCAAAAGAAACGTTTGGACGTGAAATCCGTGTATTTGAAACAGCAACAGCTTCTTCAGTGCCTCCTGATGTTTCCAGCAATGGTACTTCCTACTTGACATAGAAATTATCACTAATACAACTTCCCAAACACGATTCTATGGTCTGTTTTCATATATGCTCATTTTATTTTGCTGTGGCCTTTCTCAATCATCTTCTGCAGTGTCAGAGGAGCCCGAAGACTTCTATGAGTTCACACCAGAGGATTATTATCGACTTTTGGGAACTAAAAAAGAAGGTAAGATACACTTGTATAGACTTTCAGATGAAAAATGGCTTCAAGTATTTGCTAAAGTGAAATTTCTAGCTGACCTCTAACAGAAGAACAAAAAAACATGTCAATTAGTTGTCTGTCGATTTATTTGACAAATTACACTAGAACTCCAGACTCTATTATTTTTCTTTTATGCTTGCGCCTTGGGTATATTCACCGTGTCTTCCACATTTTTACCTTCTTCAATGGATCTTGTTTATTATTATAGATCTGTAGAAATGTATACAGGAATTTGGTTATTTTAATGATTCTGCTTATTCTAACTGGTGTTGGGAAAATTTTCAACAGAGAAGCACTTGAAGACGAAGAAAATTCGTGAGGCAGAAGAAGCTGCACGCAGAGCAAGGATAACTAAGGTTTTCAGTTGATCTTTCTCTCCAGATGATTCTTTCACTTGTATCAAGTTTGAATAATTTGGTGTTAGATTTGGTAAATTAAGTTTTCATCAGTATTGTCAAAGCCACACTTGACATCTGAAGGTTGTTGTTGCTGAACATCTGAGGCTGAAAGTGTCATCTTGGACAGTTTTAGTGCCTAAATAAGGCTCTAAGCGTGCTCCTCATTGTGGATCTATCTTGGAGAGGGCGATAAGAAATAAATGCAGCTGGCGAAATGCTACTTTAATGGTTTAGAAAATATTGTGAATAAATGGTCAGTGATTATGAAGAGGAAATTTTAAGCTTTGCTGAAGAAAACTAGCCAGAAAGATTAATTGGAACTTAAAAAAACAAGTTATGTCCGAATTATTTGTTGAAAAAATAAATTCTGAACTTAATTGACATGACTTTTTATCCATATATGTTAACTGAATTGCAGATTTTTCAAATTTCTTGGCCCATACAACTTCTTGTCTGTGTACTGAGTTTTCTTCATCATACATATATTATCTTATTTGTTTCTTCATCTGCACCTTACTTTGGGGTGTTGGCTTTTATCGCAGCTTTGCACTTAAAGTCCCAGGGGGACCTTGACACTTTTCGACGTCTTTTCATTTGACATTATTGGTTTTTATATCACGTGTTGGTCTGTGTTGTTCAGGCTGTAATCAGAGTACGCTTCCCGGATAATTATATATTGGAGGCCACATTTCATCCGTCAGAGACAATCAAGAGCTTACTTGACCTTCTTGTGAAAGTGATTGCTCACCCTGAACTGCCTTTCTATATCTGTAAGATTATTCTAAACATTTGCTACATTTTACTTTTTCCTATATTTTACTCTCAAGAGCAGTTTATAATAATGGTGTGGCTGAAGATTTAATGCTTGTCCGTTATTTCAGATACCACTCCTCCTAAGAAGCAAATAAAAGATTTTTCCAAGGATTTCTATTCCGCTGGATTTATTCCTGGTGCTGTTGTTTATTTCTCTTACGATCTACCCAAAGGTTAGTGCAAACTGTTAACAGTCT</genome_strand>
        <mrna_strand>CTTGTTTGCTTGTGTGGGTAATGATAGTTGATTCTGCATCAGCTATAAAGCGCCAGAGATTCACCGTCGTTGATCCAATGGAGTTGGAATCAGCTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAAGCTTGCTGCTGCAAAAGAAAAGTTTGGACGTGAAATCCGTGTATTTGAAACAGCAACAGCTTCTTCAGTGCCTCCTGATGTTTCCAGCAATG.......................................................................................................................TGTCAGAGGAGCCCGAAGACTTCTATGAGTTCACTCCGGAGGATTATTATCGACTTTTGGGAACTAAAAAAGAAG....................................................................................................................................................................................................................................................................................................................................CGAAGCACTTGAAGACGAAGAAAATTCGTGAGGCAGAAGAAGCTGCGCGCAGAGCAAGGATAACTAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTAATCAGAGTACGCTTCCCGGATAATTATATATTGGAGGCCACATTTCATCCGTCAGAGACAATCAAGAGCTTACTTGACCTTCTTGTGAAAGTGATTGCTCGCCCTGAACTGCCTTTCTATATCT...............................................................................................................ATACCACTCCTCCTAAGAAGCAAATAAAAGATTTTTCTCAGGATTTCTATTCTGCTGGATTTATTCCTGGTGCTGTTGTTTATTTCTCTAACGATCTACCCAAAGGTGA-TG-ATGGTGCT-GCAGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E444661" ref_strand="+" ref_description="SGN-E444661 [cSTA-43-B24]">
      <seq>cttgtttgcttgtgtgggtaatgatagttgattctgcatcagctataaagcgccagagattcaccgtcgttgatccaatggagttggaatcagctaaggcgaagcttgctgctgcaaaagaaaagtttggacgtgaaatccgtgtatttgaaacagcaacagcttcttcagtgcctcctgatgtttccagcaatgtgtcagaggagcccgaagacttctatgagttcactccggaggattattatcgacttttgggaactaaaaaagaagcgaagcacttgaagacgaagaaaattcgtgaggcagaagaagctgcgcgcagagcaaggataactaaggctgtaatcagagtacgcttcccggataattatatattggaggccacatttcatccgtcagagacaatcaagagcttact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="+" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="70459" stop="74421"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70759" g_stop="70856" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70857" i_stop="72686" i_length="1830">
            <donor d_prob="0.981" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72687" g_stop="72783" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="195" r_length="97" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72784" i_stop="72902" i_length="119">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72903" g_stop="72977" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="270" r_length="75" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="72978" i_stop="73301" i_length="324">
            <donor d_prob="0.986" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73302" g_stop="73369" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="338" r_length="68" r_score="0.971"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="73370" i_stop="74051" i_length="682">
            <donor d_prob="0.960" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74052" g_stop="74131" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="418" r_length="80" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="+" ref_id="SGN-E444661" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>418</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E444661" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70759" e_stop="70856"/>
          <exon e_start="72687" e_stop="72783"/>
          <exon e_start="72903" e_stop="72977"/>
          <exon e_start="73302" e_stop="73369"/>
          <exon e_start="74052" e_stop="74131"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCTTTGCTTGTGTGGGTAATGATAGTTGATTCTGCACCAGCTACAAAGCGCCAGAGATTCACCGCCGTTGATCCGATGGAGTTGGAATCAGCTAAGGTATTCATTTCAATCTCATCTTTCTTTTCTCCTTTCAAGATACCGGTTCGATTTAACTTCTTGTTTTACCCCTTTTTGTGTGACTATTCAGACCAGTTCGCATGTGTTTCTGTGGTTGATTCATGGTGGGAAAAGCCATCTTGTTTGCTATTTTCTTGGTTTTCTTTATTTAGAATCTTGTAGAAAGAAGTTTGTATAAAGACTACTTCCAGGAAAAATCTCAACACAAGAAAGGCGCTAGTTGTATGTGCCTTTTGTTTACCTACATTCCGTTGTTTTAAAGTTGCTGTTTGTTGTTAATCTTTATACCCATTCCATTTGCTTTGAGTTGCTGTTTCTTGTTGATCTTTAAACCCATTCCATTGTTTTAAGAGTTGCTGTTTCTGGTTAATCTTTAAACCCATTCATTGTTTTAGAGTTGCTGCTTCTTGTTAATCTTCAAGCCCGTTCCATTGTTTTAGGTTTGCTGTGTCTTGTTAATCTTTAAACCCATTGACACACGTTCTTAATTATCTGCTTCTTGTTAATACTTAAACCCATTTATACACAATCCATTGTTTAAGAGTTGCTGCATACCTGCTTCTTGTTAGTATTTAAACCTATTTACATACATTTCGTTGTTTTATGTTTCTGTACATGGGAAATGTTGTTAGAACATCACCTTTCTTCCCATTTTATATGATCACTGATTTATCTCTTTGTGCCCATATAACAAATAAAGTGTATGCCCAACTCTTCAGTTTCTCTAGTATTGTATTGAGCAAATCAAGCATACAAGTGTGAAATTCAGGCATGCAAGTATTGCACTTTTTTTTTGTTATATATTTGTAATACACCCCTTATTTTTTTCAAAAATTGAAGCACTTGTAGAGATGTGCATAGGCCATAAAACTTCCGAATTGAACTGTGTTAAAGAATGACGGTTAATGAGTTGGGTGGACTCCTTATAAGGCTGGACAATCCTCCTCCCTTTGAGTTAGCTTTTGGGGTGTGAGTTAGGCCTAAAACCTAATTTCACAAATTGTTAAGGTTTAGCTTGACACATTTGTAATAGCCTGATTTGTATCTAGTAAGGAAAAAAAACAGTTGGGTGAACCTAACATCCAAGTTTATGCAGGGTTCGGGGGCTAGGTCCGCTCTCCAAGTGGTACATACCATGGTTGAAACCCATGACATATAGATCAAATGGAGATAACTTTACTGCTGCTCCAGGTCTCCCCTTCACCTAACAGCAAACAAATTAAAATTTAAAATAAAATAAGAAACTGCTCCGGTGTCACTGGTTATGATGTTGTTGATGATTATGATGATGATGATGTTGTTGTTGCAAACTGCTCTGACAGAGGCGGAGCTAGAATTTTCAATAAAGGGGTTCATAATGTGTAGAAATAGATACCCGAAGGAGGTTCAACATATATATACATATAAATTTATTTTAACCATGTATAAATAATATAATTTCCACTGAACTTAATGCAATGTAGCTCCGCCCCTGGCCCTGAAGGGGAAGACCAAAGATCAGCACTTCCTTAAAATTATTGAACTTGCAGCAGCACTGTGGACGATGAGTTATAGTAAAATTTAACTTGCAGCTGTAAAAGTAAAGAATGATAAAAAAAATCCCATACAAAATCTGCCAAATTCGGTTCTACTATCTGTCAAGTAAAGTTACCTGTTCCCCTTTGTGTAAATACATCCAGCTTTACTTCAGCTAAACTCTCAAAAAGCTAAAATCATGGAAAGCTCCGTCTGTTACTCAATCATGGAATATATATATATACACACATACATACTGGACTGTAACTTTTCTGTTTTATTGGGTTAATTCAGGCGAAGCTTGCTGCTGCAAAAGAAACGTTTGGACGTGAAATCCGTGTATTTGAAACAGCAACAGCTTCTTCAGTGCCTCCTGATGTTTCCAGCAATGGTACTTCCTACTTGACATAGAAATTATCACTAATACAACTTCCCAAACACGATTCTATGGTCTGTTTTCATATATGCTCATTTTATTTTGCTGTGGCCTTTCTCAATCATCTTCTGCAGTGTCAGAGGAGCCCGAAGACTTCTATGAGTTCACACCAGAGGATTATTATCGACTTTTGGGAACTAAAAAAGAAGGTAAGATACACTTGTATAGACTTTCAGATGAAAAATGGCTTCAAGTATTTGCTAAAGTGAAATTTCTAGCTGACCTCTAACAGAAGAACAAAAAAACATGTCAATTAGTTGTCTGTCGATTTATTTGACAAATTACACTAGAACTCCAGACTCTATTATTTTTCTTTTATGCTTGCGCCTTGGGTATATTCACCGTGTCTTCCACATTTTTACCTTCTTCAATGGATCTTGTTTATTATTATAGATCTGTAGAAATGTATACAGGAATTTGGTTATTTTAATGATTCTGCTTATTCTAACTGGTGTTGGGAAAATTTTCAACAGAGAAGCACTTGAAGACGAAGAAAATTCGTGAGGCAGAAGAAGCTGCACGCAGAGCAAGGATAACTAAGGTTTTCAGTTGATCTTTCTCTCCAGATGATTCTTTCACTTGTATCAAGTTTGAATAATTTGGTGTTAGATTTGGTAAATTAAGTTTTCATCAGTATTGTCAAAGCCACACTTGACATCTGAAGGTTGTTGTTGCTGAACATCTGAGGCTGAAAGTGTCATCTTGGACAGTTTTAGTGCCTAAATAAGGCTCTAAGCGTGCTCCTCATTGTGGATCTATCTTGGAGAGGGCGATAAGAAATAAATGCAGCTGGCGAAATGCTACTTTAATGGTTTAGAAAATATTGTGAATAAATGGTCAGTGATTATGAAGAGGAAATTTTAAGCTTTGCTGAAGAAAACTAGCCAGAAAGATTAATTGGAACTTAAAAAAACAAGTTATGTCCGAATTATTTGTTGAAAAAATAAATTCTGAACTTAATTGACATGACTTTTTATCCATATATGTTAACTGAATTGCAGATTTTTCAAATTTCTTGGCCCATACAACTTCTTGTCTGTGTACTGAGTTTTCTTCATCATACATATATTATCTTATTTGTTTCTTCATCTGCACCTTACTTTGGGGTGTTGGCTTTTATCGCAGCTTTGCACTTAAAGTCCCAGGGGGACCTTGACACTTTTCGACGTCTTTTCATTTGACATTATTGGTTTTTATATCACGTGTTGGTCTGTGTTGTTCAGGCTGTAATCAGAGTACGCTTCCCGGATAATTATATATTGGAGGCCACATTTCATCCGTCAGAGACAATCAAGAGCTTACT</genome_strand>
        <mrna_strand>CTTGTTTGCTTGTGTGGGTAATGATAGTTGATTCTGCATCAGCTATAAAGCGCCAGAGATTCACCGTCGTTGATCCAATGGAGTTGGAATCAGCTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAAGCTTGCTGCTGCAAAAGAAAAGTTTGGACGTGAAATCCGTGTATTTGAAACAGCAACAGCTTCTTCAGTGCCTCCTGATGTTTCCAGCAATG.......................................................................................................................TGTCAGAGGAGCCCGAAGACTTCTATGAGTTCACTCCGGAGGATTATTATCGACTTTTGGGAACTAAAAAAGAAG....................................................................................................................................................................................................................................................................................................................................CGAAGCACTTGAAGACGAAGAAAATTCGTGAGGCAGAAGAAGCTGCGCGCAGAGCAAGGATAACTAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTAATCAGAGTACGCTTCCCGGATAATTATATATTGGAGGCCACATTTCATCCGTCAGAGACAATCAAGAGCTTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E270723" ref_strand="+" ref_description="SGN-E270723 [cLEM-6-L13]">
      <seq>ttctttgcttgtgtgggtaatgatagttgattctgcaccagctacaaagcgccagagattcaccgccgttgatccgatggagttggaatcagctaaagcgaagcttgctgctgcaaaagaaacgtttggacgtgaaatccgtgtatttgaaacagcaacagcttcttcagtgcctcctgatgtttccagcaatgtgtcagaggagcccgaagacttctatgagttcacaccagaggattattatcgacttttgggaactaaaaaagaagagaagcacttgaagacgaagaaaattcgtgaggcagaagaagctgcacgcagagcaaggataactaaggctgtaatcagagtacgcttcccggataattatatattggaggccacatttcatccgtcagagacaatcaagagcttacttgaccttcttgtgaaagtgattgctcaccctgaactgcctttctatatctataccactcctcctaagaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="+" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="70460" stop="74421"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70760" g_stop="70856" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70857" i_stop="72686" i_length="1830">
            <donor d_prob="0.981" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72687" g_stop="72783" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="194" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72784" i_stop="72902" i_length="119">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72903" g_stop="72977" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="269" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="72978" i_stop="73301" i_length="324">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73302" g_stop="73369" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="270" r_stop="337" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="73370" i_stop="74051" i_length="682">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74052" g_stop="74181" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="467" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="74182" i_stop="74292" i_length="111">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="74293" g_stop="74313" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="488" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="+" ref_id="SGN-E270723" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E270723" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70760" e_stop="70856"/>
          <exon e_start="72687" e_stop="72783"/>
          <exon e_start="72903" e_stop="72977"/>
          <exon e_start="73302" e_stop="73369"/>
          <exon e_start="74052" e_stop="74181"/>
          <exon e_start="74293" e_stop="74313"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTTGCTTGTGTGGGTAATGATAGTTGATTCTGCACCAGCTACAAAGCGCCAGAGATTCACCGCCGTTGATCCGATGGAGTTGGAATCAGCTAAGGTATTCATTTCAATCTCATCTTTCTTTTCTCCTTTCAAGATACCGGTTCGATTTAACTTCTTGTTTTACCCCTTTTTGTGTGACTATTCAGACCAGTTCGCATGTGTTTCTGTGGTTGATTCATGGTGGGAAAAGCCATCTTGTTTGCTATTTTCTTGGTTTTCTTTATTTAGAATCTTGTAGAAAGAAGTTTGTATAAAGACTACTTCCAGGAAAAATCTCAACACAAGAAAGGCGCTAGTTGTATGTGCCTTTTGTTTACCTACATTCCGTTGTTTTAAAGTTGCTGTTTGTTGTTAATCTTTATACCCATTCCATTTGCTTTGAGTTGCTGTTTCTTGTTGATCTTTAAACCCATTCCATTGTTTTAAGAGTTGCTGTTTCTGGTTAATCTTTAAACCCATTCATTGTTTTAGAGTTGCTGCTTCTTGTTAATCTTCAAGCCCGTTCCATTGTTTTAGGTTTGCTGTGTCTTGTTAATCTTTAAACCCATTGACACACGTTCTTAATTATCTGCTTCTTGTTAATACTTAAACCCATTTATACACAATCCATTGTTTAAGAGTTGCTGCATACCTGCTTCTTGTTAGTATTTAAACCTATTTACATACATTTCGTTGTTTTATGTTTCTGTACATGGGAAATGTTGTTAGAACATCACCTTTCTTCCCATTTTATATGATCACTGATTTATCTCTTTGTGCCCATATAACAAATAAAGTGTATGCCCAACTCTTCAGTTTCTCTAGTATTGTATTGAGCAAATCAAGCATACAAGTGTGAAATTCAGGCATGCAAGTATTGCACTTTTTTTTTGTTATATATTTGTAATACACCCCTTATTTTTTTCAAAAATTGAAGCACTTGTAGAGATGTGCATAGGCCATAAAACTTCCGAATTGAACTGTGTTAAAGAATGACGGTTAATGAGTTGGGTGGACTCCTTATAAGGCTGGACAATCCTCCTCCCTTTGAGTTAGCTTTTGGGGTGTGAGTTAGGCCTAAAACCTAATTTCACAAATTGTTAAGGTTTAGCTTGACACATTTGTAATAGCCTGATTTGTATCTAGTAAGGAAAAAAAACAGTTGGGTGAACCTAACATCCAAGTTTATGCAGGGTTCGGGGGCTAGGTCCGCTCTCCAAGTGGTACATACCATGGTTGAAACCCATGACATATAGATCAAATGGAGATAACTTTACTGCTGCTCCAGGTCTCCCCTTCACCTAACAGCAAACAAATTAAAATTTAAAATAAAATAAGAAACTGCTCCGGTGTCACTGGTTATGATGTTGTTGATGATTATGATGATGATGATGTTGTTGTTGCAAACTGCTCTGACAGAGGCGGAGCTAGAATTTTCAATAAAGGGGTTCATAATGTGTAGAAATAGATACCCGAAGGAGGTTCAACATATATATACATATAAATTTATTTTAACCATGTATAAATAATATAATTTCCACTGAACTTAATGCAATGTAGCTCCGCCCCTGGCCCTGAAGGGGAAGACCAAAGATCAGCACTTCCTTAAAATTATTGAACTTGCAGCAGCACTGTGGACGATGAGTTATAGTAAAATTTAACTTGCAGCTGTAAAAGTAAAGAATGATAAAAAAAATCCCATACAAAATCTGCCAAATTCGGTTCTACTATCTGTCAAGTAAAGTTACCTGTTCCCCTTTGTGTAAATACATCCAGCTTTACTTCAGCTAAACTCTCAAAAAGCTAAAATCATGGAAAGCTCCGTCTGTTACTCAATCATGGAATATATATATATACACACATACATACTGGACTGTAACTTTTCTGTTTTATTGGGTTAATTCAGGCGAAGCTTGCTGCTGCAAAAGAAACGTTTGGACGTGAAATCCGTGTATTTGAAACAGCAACAGCTTCTTCAGTGCCTCCTGATGTTTCCAGCAATGGTACTTCCTACTTGACATAGAAATTATCACTAATACAACTTCCCAAACACGATTCTATGGTCTGTTTTCATATATGCTCATTTTATTTTGCTGTGGCCTTTCTCAATCATCTTCTGCAGTGTCAGAGGAGCCCGAAGACTTCTATGAGTTCACACCAGAGGATTATTATCGACTTTTGGGAACTAAAAAAGAAGGTAAGATACACTTGTATAGACTTTCAGATGAAAAATGGCTTCAAGTATTTGCTAAAGTGAAATTTCTAGCTGACCTCTAACAGAAGAACAAAAAAACATGTCAATTAGTTGTCTGTCGATTTATTTGACAAATTACACTAGAACTCCAGACTCTATTATTTTTCTTTTATGCTTGCGCCTTGGGTATATTCACCGTGTCTTCCACATTTTTACCTTCTTCAATGGATCTTGTTTATTATTATAGATCTGTAGAAATGTATACAGGAATTTGGTTATTTTAATGATTCTGCTTATTCTAACTGGTGTTGGGAAAATTTTCAACAGAGAAGCACTTGAAGACGAAGAAAATTCGTGAGGCAGAAGAAGCTGCACGCAGAGCAAGGATAACTAAGGTTTTCAGTTGATCTTTCTCTCCAGATGATTCTTTCACTTGTATCAAGTTTGAATAATTTGGTGTTAGATTTGGTAAATTAAGTTTTCATCAGTATTGTCAAAGCCACACTTGACATCTGAAGGTTGTTGTTGCTGAACATCTGAGGCTGAAAGTGTCATCTTGGACAGTTTTAGTGCCTAAATAAGGCTCTAAGCGTGCTCCTCATTGTGGATCTATCTTGGAGAGGGCGATAAGAAATAAATGCAGCTGGCGAAATGCTACTTTAATGGTTTAGAAAATATTGTGAATAAATGGTCAGTGATTATGAAGAGGAAATTTTAAGCTTTGCTGAAGAAAACTAGCCAGAAAGATTAATTGGAACTTAAAAAAACAAGTTATGTCCGAATTATTTGTTGAAAAAATAAATTCTGAACTTAATTGACATGACTTTTTATCCATATATGTTAACTGAATTGCAGATTTTTCAAATTTCTTGGCCCATACAACTTCTTGTCTGTGTACTGAGTTTTCTTCATCATACATATATTATCTTATTTGTTTCTTCATCTGCACCTTACTTTGGGGTGTTGGCTTTTATCGCAGCTTTGCACTTAAAGTCCCAGGGGGACCTTGACACTTTTCGACGTCTTTTCATTTGACATTATTGGTTTTTATATCACGTGTTGGTCTGTGTTGTTCAGGCTGTAATCAGAGTACGCTTCCCGGATAATTATATATTGGAGGCCACATTTCATCCGTCAGAGACAATCAAGAGCTTACTTGACCTTCTTGTGAAAGTGATTGCTCACCCTGAACTGCCTTTCTATATCTGTAAGATTATTCTAAACATTTGCTACATTTTACTTTTTCCTATATTTTACTCTCAAGAGCAGTTTATAATAATGGTGTGGCTGAAGATTTAATGCTTGTCCGTTATTTCAGATACCACTCCTCCTAAGAAGC</genome_strand>
        <mrna_strand>TTCTTTGCTTGTGTGGGTAATGATAGTTGATTCTGCACCAGCTACAAAGCGCCAGAGATTCACCGCCGTTGATCCGATGGAGTTGGAATCAGCTAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAAGCTTGCTGCTGCAAAAGAAACGTTTGGACGTGAAATCCGTGTATTTGAAACAGCAACAGCTTCTTCAGTGCCTCCTGATGTTTCCAGCAATG.......................................................................................................................TGTCAGAGGAGCCCGAAGACTTCTATGAGTTCACACCAGAGGATTATTATCGACTTTTGGGAACTAAAAAAGAAG....................................................................................................................................................................................................................................................................................................................................AGAAGCACTTGAAGACGAAGAAAATTCGTGAGGCAGAAGAAGCTGCACGCAGAGCAAGGATAACTAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTAATCAGAGTACGCTTCCCGGATAATTATATATTGGAGGCCACATTTCATCCGTCAGAGACAATCAAGAGCTTACTTGACCTTCTTGTGAAAGTGATTGCTCACCCTGAACTGCCTTTCTATATCT...............................................................................................................ATACCACTCCTCCTAAGAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E278349" ref_strand="-" ref_description="SGN-E278349 [cLEL-2-D1](-)">
      <seq>gatagttgattctgcaccagctacaaagcgccttagattcaccgccgttgatccgatggagttggaatcagctaaggcgaagctcgctgctgcaaaagaaacgtttggacgtgaaatccgtgtatttgaaacagcaacagcttcttcagtgcctcctgatgtttccagcaatgtgtcagaggagcccgaagacttctatgagttcacaccagaggattattatcgacttttgggaactaaaaaagaagagaagcacttgaagacgaagaaaattcgtgaggcagaagaagctgcacgcagagcaagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="+" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="70481" stop="73661"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70781" g_stop="70856" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70857" i_stop="72686" i_length="1830">
            <donor d_prob="0.981" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72687" g_stop="72783" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="173" r_length="97" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72784" i_stop="72902" i_length="119">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72903" g_stop="72977" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="248" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="72978" i_stop="73301" i_length="324">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="73302" g_stop="73361" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="308" r_length="60" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="+" ref_id="SGN-E278349" ref_strand="-">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>308</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E278349" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="70781" e_stop="70856"/>
          <exon e_start="72687" e_stop="72783"/>
          <exon e_start="72903" e_stop="72977"/>
          <exon e_start="73302" e_stop="73361"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATAGTTGATTCTGCACCAGCTACAAAGCGCCAGAGATTCACCGCCGTTGATCCGATGGAGTTGGAATCAGCTAAGGTATTCATTTCAATCTCATCTTTCTTTTCTCCTTTCAAGATACCGGTTCGATTTAACTTCTTGTTTTACCCCTTTTTGTGTGACTATTCAGACCAGTTCGCATGTGTTTCTGTGGTTGATTCATGGTGGGAAAAGCCATCTTGTTTGCTATTTTCTTGGTTTTCTTTATTTAGAATCTTGTAGAAAGAAGTTTGTATAAAGACTACTTCCAGGAAAAATCTCAACACAAGAAAGGCGCTAGTTGTATGTGCCTTTTGTTTACCTACATTCCGTTGTTTTAAAGTTGCTGTTTGTTGTTAATCTTTATACCCATTCCATTTGCTTTGAGTTGCTGTTTCTTGTTGATCTTTAAACCCATTCCATTGTTTTAAGAGTTGCTGTTTCTGGTTAATCTTTAAACCCATTCATTGTTTTAGAGTTGCTGCTTCTTGTTAATCTTCAAGCCCGTTCCATTGTTTTAGGTTTGCTGTGTCTTGTTAATCTTTAAACCCATTGACACACGTTCTTAATTATCTGCTTCTTGTTAATACTTAAACCCATTTATACACAATCCATTGTTTAAGAGTTGCTGCATACCTGCTTCTTGTTAGTATTTAAACCTATTTACATACATTTCGTTGTTTTATGTTTCTGTACATGGGAAATGTTGTTAGAACATCACCTTTCTTCCCATTTTATATGATCACTGATTTATCTCTTTGTGCCCATATAACAAATAAAGTGTATGCCCAACTCTTCAGTTTCTCTAGTATTGTATTGAGCAAATCAAGCATACAAGTGTGAAATTCAGGCATGCAAGTATTGCACTTTTTTTTTGTTATATATTTGTAATACACCCCTTATTTTTTTCAAAAATTGAAGCACTTGTAGAGATGTGCATAGGCCATAAAACTTCCGAATTGAACTGTGTTAAAGAATGACGGTTAATGAGTTGGGTGGACTCCTTATAAGGCTGGACAATCCTCCTCCCTTTGAGTTAGCTTTTGGGGTGTGAGTTAGGCCTAAAACCTAATTTCACAAATTGTTAAGGTTTAGCTTGACACATTTGTAATAGCCTGATTTGTATCTAGTAAGGAAAAAAAACAGTTGGGTGAACCTAACATCCAAGTTTATGCAGGGTTCGGGGGCTAGGTCCGCTCTCCAAGTGGTACATACCATGGTTGAAACCCATGACATATAGATCAAATGGAGATAACTTTACTGCTGCTCCAGGTCTCCCCTTCACCTAACAGCAAACAAATTAAAATTTAAAATAAAATAAGAAACTGCTCCGGTGTCACTGGTTATGATGTTGTTGATGATTATGATGATGATGATGTTGTTGTTGCAAACTGCTCTGACAGAGGCGGAGCTAGAATTTTCAATAAAGGGGTTCATAATGTGTAGAAATAGATACCCGAAGGAGGTTCAACATATATATACATATAAATTTATTTTAACCATGTATAAATAATATAATTTCCACTGAACTTAATGCAATGTAGCTCCGCCCCTGGCCCTGAAGGGGAAGACCAAAGATCAGCACTTCCTTAAAATTATTGAACTTGCAGCAGCACTGTGGACGATGAGTTATAGTAAAATTTAACTTGCAGCTGTAAAAGTAAAGAATGATAAAAAAAATCCCATACAAAATCTGCCAAATTCGGTTCTACTATCTGTCAAGTAAAGTTACCTGTTCCCCTTTGTGTAAATACATCCAGCTTTACTTCAGCTAAACTCTCAAAAAGCTAAAATCATGGAAAGCTCCGTCTGTTACTCAATCATGGAATATATATATATACACACATACATACTGGACTGTAACTTTTCTGTTTTATTGGGTTAATTCAGGCGAAGCTTGCTGCTGCAAAAGAAACGTTTGGACGTGAAATCCGTGTATTTGAAACAGCAACAGCTTCTTCAGTGCCTCCTGATGTTTCCAGCAATGGTACTTCCTACTTGACATAGAAATTATCACTAATACAACTTCCCAAACACGATTCTATGGTCTGTTTTCATATATGCTCATTTTATTTTGCTGTGGCCTTTCTCAATCATCTTCTGCAGTGTCAGAGGAGCCCGAAGACTTCTATGAGTTCACACCAGAGGATTATTATCGACTTTTGGGAACTAAAAAAGAAGGTAAGATACACTTGTATAGACTTTCAGATGAAAAATGGCTTCAAGTATTTGCTAAAGTGAAATTTCTAGCTGACCTCTAACAGAAGAACAAAAAAACATGTCAATTAGTTGTCTGTCGATTTATTTGACAAATTACACTAGAACTCCAGACTCTATTATTTTTCTTTTATGCTTGCGCCTTGGGTATATTCACCGTGTCTTCCACATTTTTACCTTCTTCAATGGATCTTGTTTATTATTATAGATCTGTAGAAATGTATACAGGAATTTGGTTATTTTAATGATTCTGCTTATTCTAACTGGTGTTGGGAAAATTTTCAACAGAGAAGCACTTGAAGACGAAGAAAATTCGTGAGGCAGAAGAAGCTGCACGCAGAGCAAGGA</genome_strand>
        <mrna_strand>GATAGTTGATTCTGCACCAGCTACAAAGCGCCTTAGATTCACCGCCGTTGATCCGATGGAGTTGGAATCAGCTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAAGCTCGCTGCTGCAAAAGAAACGTTTGGACGTGAAATCCGTGTATTTGAAACAGCAACAGCTTCTTCAGTGCCTCCTGATGTTTCCAGCAATG.......................................................................................................................TGTCAGAGGAGCCCGAAGACTTCTATGAGTTCACACCAGAGGATTATTATCGACTTTTGGGAACTAAAAAAGAAG....................................................................................................................................................................................................................................................................................................................................AGAAGCACTTGAAGACGAAGAAAATTCGTGAGGCAGAAGAAGCTGCACGCAGAGCAAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E282927" ref_strand="+" ref_description="SGN-E282927 [cLER-17-C19]">
      <seq>gaaacagcaacagcttcttcagtgcctcctgatgtttccagcaatgtgtcagaggagcccgaagacttctatgagttcacaccagaggattattatcgacttttgggaactaaaaaagaagagaagcacttgaagacgaagaaaattcgtgaggcacaagaagctgcacgcagagcaaggataactaaggctgtaatcagagtacgcttcccggataattatatattggaggccacatttcatccgtcagagacaatcaagagcttacttgaccttcttgtgaaagtgattgctcaccctgaactgcctttctatatctataccactcctcctaagaagcaaataaaagatttttccaaggatttctattccgctggatttattcctggtgctgctgtttatttctcttacgatctacccaaaggtgatgatggtgctgcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0121H01-vI5OU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLe0121H01.1" temp_strand="+" temp_description="C02SLe0121H01.1  AC215464.2 htgs_phase:3 submitted_to_sgn_as:C02SLe0121H01 sequenced_by:kribb upload_account_name:korea">
        <position start="72438" stop="74421"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72738" g_stop="72783" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72784" i_stop="72902" i_length="119">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72903" g_stop="72977" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="121" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72978" i_stop="73301" i_length="324">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="73302" g_stop="73369" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="189" r_length="68" r_score="0.985"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="73370" i_stop="74051" i_length="682">
            <donor d_prob="0.960" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74052" g_stop="74181" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="319" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="74182" i_stop="74292" i_length="111">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74293" g_stop="74419" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="443" r_length="124" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0121H01.1" gen_strand="+" ref_id="SGN-E282927" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>446</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0121H01.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E282927" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72738" e_stop="72783"/>
          <exon e_start="72903" e_stop="72977"/>
          <exon e_start="73302" e_stop="73369"/>
          <exon e_start="74052" e_stop="74181"/>
          <exon e_start="74293" e_stop="74419"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACAGCAACAGCTTCTTCAGTGCCTCCTGATGTTTCCAGCAATGGTACTTCCTACTTGACATAGAAATTATCACTAATACAACTTCCCAAACACGATTCTATGGTCTGTTTTCATATATGCTCATTTTATTTTGCTGTGGCCTTTCTCAATCATCTTCTGCAGTGTCAGAGGAGCCCGAAGACTTCTATGAGTTCACACCAGAGGATTATTATCGACTTTTGGGAACTAAAAAAGAAGGTAAGATACACTTGTATAGACTTTCAGATGAAAAATGGCTTCAAGTATTTGCTAAAGTGAAATTTCTAGCTGACCTCTAACAGAAGAACAAAAAAACATGTCAATTAGTTGTCTGTCGATTTATTTGACAAATTACACTAGAACTCCAGACTCTATTATTTTTCTTTTATGCTTGCGCCTTGGGTATATTCACCGTGTCTTCCACATTTTTACCTTCTTCAATGGATCTTGTTTATTATTATAGATCTGTAGAAATGTATACAGGAATTTGGTTATTTTAATGATTCTGCTTATTCTAACTGGTGTTGGGAAAATTTTCAACAGAGAAGCACTTGAAGACGAAGAAAATTCGTGAGGCAGAAGAAGCTGCACGCAGAGCAAGGATAACTAAGGTTTTCAGTTGATCTTTCTCTCCAGATGATTCTTTCACTTGTATCAAGTTTGAATAATTTGGTGTTAGATTTGGTAAATTAAGTTTTCATCAGTATTGTCAAAGCCACACTTGACATCTGAAGGTTGTTGTTGCTGAACATCTGAGGCTGAAAGTGTCATCTTGGACAGTTTTAGTGCCTAAATAAGGCTCTAAGCGTGCTCCTCATTGTGGATCTATCTTGGAGAGGGCGATAAGAAATAAATGCAGCTGGCGAAATGCTACTTTAATGGTTTAGAAAATATTGTGAATAAATGGTCAGTGATTATGAAGAGGAAATTTTAAGCTTTGCTGAAGAAAACTAGCCAGAAAGATTAATTGGAACTTAAAAAAACAAGTTATGTCCGAATTATTTGTTGAAAAAATAAATTCTGAACTTAATTGACATGACTTTTTATCCATATATGTTAACTGAATTGCAGATTTTTCAAATTTCTTGGCCCATACAACTTCTTGTCTGTGTACTGAGTTTTCTTCATCATACATATATTATCTTATTTGTTTCTTCATCTGCACCTTACTTTGGGGTGTTGGCTTTTATCGCAGCTTTGCACTTAAAGTCCCAGGGGGACCTTGACACTTTTCGACGTCTTTTCATTTGACATTATTGGTTTTTATATCACGTGTTGGTCTGTGTTGTTCAGGCTGTAATCAGAGTACGCTTCCCGGATAATTATATATTGGAGGCCACATTTCATCCGTCAGAGACAATCAAGAGCTTACTTGACCTTCTTGTGAAAGTGATTGCTCACCCTGAACTGCCTTTCTATATCTGTAAGATTATTCTAAACATTTGCTACATTTTACTTTTTCCTATATTTTACTCTCAAGAGCAGTTTATAATAATGGTGTGGCTGAAGATTTAATGCTTGTCCGTTATTTCAGATACCACTCCTCCTAAGAAGCAAATAAAAGATTTTTCCAAGGATTTCTATTCCGCTGGATTTATTCCTGGTGCTGTTGTTTATTTCTCTTACGATCTACCCAAAGGTTAGTGCAAACTGTTAACAGT</genome_strand>
        <mrna_strand>GAAACAGCAACAGCTTCTTCAGTGCCTCCTGATGTTTCCAGCAATG.......................................................................................................................TGTCAGAGGAGCCCGAAGACTTCTATGAGTTCACACCAGAGGATTATTATCGACTTTTGGGAACTAAAAAAGAAG....................................................................................................................................................................................................................................................................................................................................AGAAGCACTTGAAGACGAAGAAAATTCGTGAGGCACAAGAAGCTGCACGCAGAGCAAGGATAACTAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTAATCAGAGTACGCTTCCCGGATAATTATATATTGGAGGCCACATTTCATCCGTCAGAGACAATCAAGAGCTTACTTGACCTTCTTGTGAAAGTGATTGCTCACCCTGAACTGCCTTTCTATATCT...............................................................................................................ATACCACTCCTCCTAAGAAGCAAATAAAAGATTTTTCCAAGGATTTCTATTCCGCTGGATTTATTCCTGGTGCTGCTGTTTATTTCTCTTACGATCTACCCAAAGGTGA-TG-ATGGTGCT-GCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>83</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="4683" PGL_stop="5431"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4683" e_stop="5431"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.987">
            <gDNA_exon_boundary e_start="4683" e_stop="5431" e_length="749"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4683" stop="5296"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288195" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4701" stop="5285"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295411" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4721" stop="5431"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4721" stop="5424"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E545438" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4722" stop="5181"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308829" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCTAAATCAATCATTTTTTGAATTTTTTATTCGTAGAGAAAAAGTTTCATTTTATTCTTCAAAAATGAGGAGAGAAGGTCGCCAACACGGTATGGTCCGTACTTACCCAATTTTACCCTCTCCATGGAACCCAAGACCCGAGCCCAGGTACATGAACAAGTCCAATTCACCACCAACCGCTGGGCTTTTCGCAAAGGTCCCAACTAAGCCCAGTAACCATTCCAAGTTCACCGGCAAGTGCGGTAGACCCAGGTGCACCAGCTGCCATGTTCATCCAGCTGCAAAATCCAAGGACAAAACTAAGGGCACACAAAAGTTAAAGGGATGCGGCGACGTCGTTTCGTTGGTTACTTGGAGAGTTGTGGATGCTAGGCCTGGGTTCAATTTTTCAGGGTTTTCAGCTACTGGAATTTTGGATCATTTGGATAGCGATTCTTCTTATTACATGGATCATGAAATTTACTATGATGAAGATTACGGTTACGGAGATCAGGAATTAGTAGTTGACTCCGATGGGTCTCCAGCGATCGGCGTTGAGATTGAAGATAACGATGAAGAAAAAATGAGTTTCTGCGAGGTGGGATTTGTGTGGGAAGATGTTGAAGAAGATGAAGATTGGTGTGTTGTGGAAGGAATCTAATTCAGTTCCTTCCAACTGTATTTGTGTTAACCTGTTGAACAAAAATTGTTACATTTCTGTAATTGTATTTACTGTCAAATAAATTGGAACATTTCGATGACATTGCAT</gDNA_template>
            <first_frame> F  *  I  N  H  F  L  N  F  L  F  V  E  K  K  F  H  F  I  L  Q  K  *  G  E  K  V  A  N  T  V  W  S  V  L  T  Q  F  Y  P  L  H  G  T  Q  D  P  S  P  G  T  *  T  S  P  I  H  H  Q  P  L  G  F  S  Q  R  S  Q  L  S  P  V  T  I  P  S  S  P  A  S  A  V  D  P  G  A  P  A  A  M  F  I  Q  L  Q  N  P  R  T  K  L  R  A  H  K  S  *  R  D  A  A  T  S  F  R  W  L  L  G  E  L  W  M  L  G  L  G  S  I  F  Q  G  F  Q  L  L  E  F  W  I  I  W  I  A  I  L  L  I  T  W  I  M  K  F  T  M  M  K  I  T  V  T  E  I  R  N  *  *  L  T  P  M  G  L  Q  R  S  A  L  R  L  K  I  T  M  K  K  K  *  V  S  A  R  W  D  L  C  G  K  M  L  K  K  M  K  I  G  V  L  W  K  E  S  N  S  V  P  S  N  C  I  C  V  N  L  L  N  K  N  C  Y  I  S  V  I  V  F  T  V  K  *  I  G  T  F  R  *  H  C   </first_frame>
            <second_frame>  S  K  S  I  I  F  *  I  F  Y  S  *  R  K  S  F  I  L  F  F  K  N  E  E  R  R  S  P  T  R  Y  G  P  Y  L  P  N  F  T  L  S  M  E  P  K  T  R  A  Q  V  H  E  Q  V  Q  F  T  T  N  R  W  A  F  R  K  G  P  N  *  A  Q  *  P  F  Q  V  H  R  Q  V  R  *  T  Q  V  H  Q  L  P  C  S  S  S  C  K  I  Q  G  Q  N  *  G  H  T  K  V  K  G  M  R  R  R  R  F  V  G  Y  L  E  S  C  G  C  *  A  W  V  Q  F  F  R  V  F  S  Y  W  N  F  G  S  F  G  *  R  F  F  L  L  H  G  S  *  N  L  L  *  *  R  L  R  L  R  R  S  G  I  S  S  *  L  R  W  V  S  S  D  R  R  *  D  *  R  *  R  *  R  K  N  E  F  L  R  G  G  I  C  V  G  R  C  *  R  R  *  R  L  V  C  C  G  R  N  L  I  Q  F  L  P  T  V  F  V  L  T  C  *  T  K  I  V  T  F  L  *  L  Y  L  L  S  N  K  L  E  H  F  D  D  I  A  </second_frame>
            <third_frame>   L  N  Q  S  F  F  E  F  F  I  R  R  E  K  V  S  F  Y  S  S  K  M  R  R  E  G  R  Q  H  G  M  V  R  T  Y  P  I  L  P  S  P  W  N  P  R  P  E  P  R  Y  M  N  K  S  N  S  P  P  T  A  G  L  F  A  K  V  P  T  K  P  S  N  H  S  K  F  T  G  K  C  G  R  P  R  C  T  S  C  H  V  H  P  A  A  K  S  K  D  K  T  K  G  T  Q  K  L  K  G  C  G  D  V  V  S  L  V  T  W  R  V  V  D  A  R  P  G  F  N  F  S  G  F  S  A  T  G  I  L  D  H  L  D  S  D  S  S  Y  Y  M  D  H  E  I  Y  Y  D  E  D  Y  G  Y  G  D  Q  E  L  V  V  D  S  D  G  S  P  A  I  G  V  E  I  E  D  N  D  E  E  K  M  S  F  C  E  V  G  F  V  W  E  D  V  E  E  D  E  D  W  C  V  V  E  G  I  *  F  S  S  F  Q  L  Y  L  C  *  P  V  E  Q  K  L  L  H  F  C  N  C  I  Y  C  Q  I  N  W  N  I  S  M  T  L  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4685" stop="5323"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>636</number_coding_nucleotides>
                  <number_encoded_amino_acids>212</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LNQSFFEFFIRREKVSFYSSKMRREGRQHGMVRTYPILPSPWNPRPEPRYMNKSNSPPTAGLFAKVPTKPSNHSKFTGKCGRPRCTSCHVHPAAKSKDKTKGTQKLKGCGDVVSLVTWRVVDARPGFNFSGFSATGILDHLDSDSSYYMDHEIYYDEDYGYGDQELVVDSDGSPAIGVEIEDNDEEKMSFCEVGFVWEDVEEDEDWCVVEGI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="5401" PGL_stop="4772"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5401" e_stop="4772"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.927"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.927">
            <gDNA_exon_boundary e_start="5401" e_stop="4772" e_length="630"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5401" stop="4772"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E430842" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGACAGTAAATACAATTACAGAAATGTAACAATTTTTGTTCAACAGGTTAACACAAATACAGTTGGAAGGAACTGAATTAGATTCCTTCCACAACACACCAATCTTCATCTTCTTCAACATCTTCCCACACAAATCCCACCTCGCAGAAACTCATTTTTTCTTCATCGTTATCTTCAATCTCAACGCCGATCGCTGGAGACCCATCGGAGTCAACTACTAATTCCTGATCTCCGTAACCGTAATCTTCATCATAGTAAATTTCATGATCCATGTAATAAGAAGAATCGCTATCCAAATGATCCAAAATTCCAGTAGCTGAAAACCCTGAAAAATTGAACCCAGGCCTAGCATCCACAACTCTCCAAGTAACCAACGAAACGACGTCGCCGCATCCCTTTAACTTTTGTGTGCCCTTAGTTTTGTCCTTGGATTTTGCAGCTGGATGAACATGGCAGCTGGTGCACCTGGGTCTACCGCACTTGCCGGTGAACTTGGAATGGTTACTGGGCTTAGTTGGGACCTTTGCGAAAAGCCCAGCGGTTGGTGGTGAATTGGACTTGTTCATGTACCTGGGCTCGGGTCTTGGGTTCCATGGAGAGGGTAAAATTGGGTAAGTACGGACCATACC</gDNA_template>
            <first_frame> L  T  V  N  T  I  T  E  M  *  Q  F  L  F  N  R  L  T  Q  I  Q  L  E  G  T  E  L  D  S  F  H  N  T  P  I  F  I  F  F  N  I  F  P  H  K  S  H  L  A  E  T  H  F  F  F  I  V  I  F  N  L  N  A  D  R  W  R  P  I  G  V  N  Y  *  F  L  I  S  V  T  V  I  F  I  I  V  N  F  M  I  H  V  I  R  R  I  A  I  Q  M  I  Q  N  S  S  S  *  K  P  *  K  I  E  P  R  P  S  I  H  N  S  P  S  N  Q  R  N  D  V  A  A  S  L  *  L  L  C  A  L  S  F  V  L  G  F  C  S  W  M  N  M  A  A  G  A  P  G  S  T  A  L  A  G  E  L  G  M  V  T  G  L  S  W  D  L  C  E  K  P  S  G  W  W  *  I  G  L  V  H  V  P  G  L  G  S  W  V  P  W  R  G  *  N  W  V  S  T  D  H  T </first_frame>
            <second_frame>  *  Q  *  I  Q  L  Q  K  C  N  N  F  C  S  T  G  *  H  K  Y  S  W  K  E  L  N  *  I  P  S  T  T  H  Q  S  S  S  S  S  T  S  S  H  T  N  P  T  S  Q  K  L  I  F  S  S  S  L  S  S  I  S  T  P  I  A  G  D  P  S  E  S  T  T  N  S  *  S  P  *  P  *  S  S  S  *  *  I  S  *  S  M  *  *  E  E  S  L  S  K  *  S  K  I  P  V  A  E  N  P  E  K  L  N  P  G  L  A  S  T  T  L  Q  V  T  N  E  T  T  S  P  H  P  F  N  F  C  V  P  L  V  L  S  L  D  F  A  A  G  *  T  W  Q  L  V  H  L  G  L  P  H  L  P  V  N  L  E  W  L  L  G  L  V  G  T  F  A  K  S  P  A  V  G  G  E  L  D  L  F  M  Y  L  G  S  G  L  G  F  H  G  E  G  K  I  G  *  V  R  T  I   </second_frame>
            <third_frame>   D  S  K  Y  N  Y  R  N  V  T  I  F  V  Q  Q  V  N  T  N  T  V  G  R  N  *  I  R  F  L  P  Q  H  T  N  L  H  L  L  Q  H  L  P  T  Q  I  P  P  R  R  N  S  F  F  L  H  R  Y  L  Q  S  Q  R  R  S  L  E  T  H  R  S  Q  L  L  I  P  D  L  R  N  R  N  L  H  H  S  K  F  H  D  P  C  N  K  K  N  R  Y  P  N  D  P  K  F  Q  *  L  K  T  L  K  N  *  T  Q  A  *  H  P  Q  L  S  K  *  P  T  K  R  R  R  R  I  P  L  T  F  V  C  P  *  F  C  P  W  I  L  Q  L  D  E  H  G  S  W  C  T  W  V  Y  R  T  C  R  *  T  W  N  G  Y  W  A  *  L  G  P  L  R  K  A  Q  R  L  V  V  N  W  T  C  S  C  T  W  A  R  V  L  G  S  M  E  R  V  K  L  G  K  Y  G  P  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5324" stop="5085"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IRFLPQHTNLHLLQHLPTQIPPRRNSFFLHRYLQSQRRSLETHRSQLLIPDLRNRNLHHSKFHDPCNKKNRYPNDPKFQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="8166" PGL_stop="5824"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="8066" e_stop="7960"/>
            <exon e_start="7870" e_stop="7812"/>
            <exon e_start="7220" e_stop="7121"/>
            <exon e_start="7030" e_stop="6968"/>
            <exon e_start="6479" e_stop="6369"/>
            <exon e_start="6181" e_stop="5860"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.891" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.455" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.920" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="8066" e_stop="7960" e_length="107"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="7959" i_stop="7871" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7870" e_stop="7812" e_length="59"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.891">
            <gDNA_intron_boundary i_start="7811" i_stop="7221" i_length="591"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="7220" e_stop="7121" e_length="100"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="7120" i_stop="7031" i_length="90"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="7030" e_stop="6968" e_length="63"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.455">
            <gDNA_intron_boundary i_start="6967" i_stop="6480" i_length="488"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="6479" e_stop="6369" e_length="111"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.920">
            <gDNA_intron_boundary i_start="6368" i_stop="6182" i_length="187"/>
          </intron>
          <exon e_serial="6" e_score="0.997">
            <gDNA_exon_boundary e_start="6181" e_stop="5860" e_length="322"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8066" stop="7960"/>
              <exon start="7870" stop="7812"/>
              <exon start="7220" stop="7121"/>
              <exon start="7030" stop="6968"/>
              <exon start="6479" stop="6369"/>
              <exon start="6181" stop="5914"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370673" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8066" stop="7960"/>
              <exon start="7870" stop="7812"/>
              <exon start="7220" stop="7121"/>
              <exon start="7030" stop="6968"/>
              <exon start="6479" stop="6406"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271249" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7868" stop="7812"/>
              <exon start="7220" stop="7121"/>
              <exon start="7030" stop="6968"/>
              <exon start="6479" stop="6369"/>
              <exon start="6181" stop="5860"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370672" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7150" stop="7121"/>
              <exon start="7030" stop="6968"/>
              <exon start="6479" stop="6369"/>
              <exon start="6181" stop="5991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205292" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCGCTACTAGCAAGGCATCTAAGCATTGTGCAACTCCACTTAAGACTCCTATG : GCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAG : TTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAG : AAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAG : GAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAG : ATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCCAGACGTAAAATTATTTTAACCACAATCATTTACCTTTTATATTAAC</gDNA_template>
            <first_frame> T  R  Y  L  L  H  L  P  S  S  R  R  K  V  Q  R  L  L  P  L  L  A  R  H  L  S  I  V  Q  L  H  L  R  L  L  W :   Q  H  Q  M  V  H  Q  T  I  P  *  Q  R  H  L  Q  K  A  E   : V  P  S  L  S  Q  P  T  E  T  N  Y  N  H  Q  L  Y  P  L  L  S  H  *  E  Q  K  K  E  L  H  E  G  N  R :   S  L  K  K  N  S  M  R  R  R  K  R  R  F  N  N  K  Q  H  *  R :   R  K  Q  E  R  N  L  G  N  L  D  K  A  F  A  S  K  L  V  P  C  L  I  S  T  R  K  Q  K  Q  Q  K  I  M  Q  K  R :   S  Q  *  H  K  L  H  C  P  N  V  E  E  C  H  I  P  A  Q  S  K  A  *  S  R  *  K  M  T  L  A  R  I  Q  E  R  R  L  A  E  K  T  H  K  S  I  T  P  C  K  E  *  C  L  I  R  M  C  F  N  W  V  F  L  P  R  E  C  F  G  G  V  S  F  L  N  M  I  *  G  E  A  T  P  K  S  C  I  K  S  Y  P  D  V  K  L  F  *  P  Q  S  F  T  F  Y  I  N </first_frame>
            <second_frame>  Q  D  T  S  S  T  S  L  P  Q  E  G  K  F  K  G  C  S  R  Y  *  Q  G  I  *  A  L  C  N  S  T  *  D  S  Y   : G  N  I  K  W  C  I  K  P  S  H  D  N  A  I  F  R  K  Q  K  :  F  Q  V  F  H  S  L  P  K  Q  I  T  I  T  N  F  I  H  S  F  L  T  E  N  R  R  K  S  C  T  K  E  T   : E  A  *  R  K  I  Q  C  E  G  G  K  E  G  S  T  T  N  N  I  K   : G  E  S  R  N  G  T  *  E  T  W  T  K  L  L  L  Q  S  S  S  P  A  *  F  L  Q  G  N  R  N  S  K  R  S  C  K  K   : D  P  S  N  T  S  S  I  A  Q  T  W  K  N  A  I  S  Q  L  K  A  R  L  S  L  D  E  K  *  L  L  Q  E  S  K  K  E  D  *  L  K  K  L  T  N  P  S  L  L  A  K  S  S  V  L  L  E  C  V  S  I  G  Y  F  F  Q  E  N  V  L  E  V  C  L  S  L  I  *  F  K  E  K  Q  L  Q  N  L  V  *  K  A  I  Q  T  *  N  Y  F  N  H  N  H  L  P  F  I  L   </second_frame>
            <third_frame>   K  I  P  P  P  P  P  F  L  K  K  E  S  S  K  V  A  P  A  T  S  K  A  S  K  H  C  A  T  P  L  K  T  P  M  :  A  T  S  N  G  A  S  N  H  P  M  T  T  P  S  S  E  S  R  S :   S  K  S  F  T  A  Y  R  N  K  L  Q  S  P  T  L  S  T  P  F  S  L  R  T  E  E  R  A  A  R  R  K  Q  :  K  L  E  E  K  F  N  A  K  E  E  K  K  V  Q  Q  Q  T  T  L  K  :  E  K  A  G  T  E  L  R  K  L  G  Q  S  F  C  F  K  A  R  P  L  P  D  F  Y  K  E  T  E  T  A  K  D  H  A  K  K  :  I  P  V  T  Q  A  P  L  P  K  R  G  R  M  P  Y  P  S  S  K  Q  G  L  V  S  M  K  N  D  S  C  K  N  P  R  K  K  T  S  *  K  N  S  Q  I  H  H  S  L  Q  R  V  V  S  Y  *  N  V  F  Q  L  G  I  S  S  K  R  M  F  W  R  C  V  F  P  *  Y  D  L  R  R  S  N  S  K  I  L  Y  K  K  L  S  R  R  K  I  I  L  T  T  I  I  Y  L  L  Y  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8064" stop="7960"/>
                    <exon start="7870" stop="7812"/>
                    <exon start="7220" stop="7121"/>
                    <exon start="7030" stop="6968"/>
                    <exon start="6479" stop="6369"/>
                    <exon start="6181" stop="6062"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>555</number_coding_nucleotides>
                  <number_encoded_amino_acids>185</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KIPPPPPFLKKESSKVAPATSKASKHCATPLKTPMATSNGASNHPMTTPSSESRSSKSFTAYRNKLQSPTLSTPFSLRTEERAARRKQKLEEKFNAKEEKKVQQQTTLKEKAGTELRKLGQSFCFKARPLPDFYKETETAKDHAKKIPVTQAPLPKRGRMPYPSSKQGLVSMKNDSCKNPRKKTS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="8166" e_stop="7960"/>
            <exon e_start="7870" e_stop="7812"/>
            <exon e_start="7688" e_stop="7614"/>
            <exon e_start="7220" e_stop="7121"/>
            <exon e_start="7030" e_stop="6968"/>
            <exon e_start="6479" e_stop="6369"/>
            <exon e_start="6181" e_stop="5824"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="0.932"/>
          <exon-intron don_prob="0.999" acc_prob="0.979" e_score="0.983"/>
          <exon-intron don_prob="0.868" acc_prob="0.891" e_score="0.980"/>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.455" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.920" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.932">
            <gDNA_exon_boundary e_start="8166" e_stop="7960" e_length="207"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="7959" i_stop="7871" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="7870" e_stop="7812" e_length="59"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.979">
            <gDNA_intron_boundary i_start="7811" i_stop="7689" i_length="123"/>
          </intron>
          <exon e_serial="3" e_score="0.980">
            <gDNA_exon_boundary e_start="7688" e_stop="7614" e_length="75"/>
          </exon>
          <intron i_serial="3" don_prob="0.868" acc_prob="0.891">
            <gDNA_intron_boundary i_start="7613" i_stop="7221" i_length="393"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="7220" e_stop="7121" e_length="100"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="7120" i_stop="7031" i_length="90"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="7030" e_stop="6968" e_length="63"/>
          </exon>
          <intron i_serial="5" don_prob="0.978" acc_prob="0.455">
            <gDNA_intron_boundary i_start="6967" i_stop="6480" i_length="488"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="6479" e_stop="6369" e_length="111"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.920">
            <gDNA_intron_boundary i_start="6368" i_stop="6182" i_length="187"/>
          </intron>
          <exon e_serial="7" e_score="0.994">
            <gDNA_exon_boundary e_start="6181" e_stop="5824" e_length="358"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8166" stop="7960"/>
              <exon start="7870" stop="7812"/>
              <exon start="7688" stop="7614"/>
              <exon start="7220" stop="7121"/>
              <exon start="7030" stop="6968"/>
              <exon start="6479" stop="6432"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419775" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7664" stop="7614"/>
              <exon start="7220" stop="7121"/>
              <exon start="7030" stop="6968"/>
              <exon start="6479" stop="6369"/>
              <exon start="6181" stop="5824"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314407" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7150" stop="7121"/>
              <exon start="7030" stop="6968"/>
              <exon start="6479" stop="6369"/>
              <exon start="6181" stop="5991"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205292" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCAATCACAACTAATACTAACTTGGACTTGATGAATGAAATGAGATCAACCCCAAAATCTTTGAGCAAGTTGATCAACTTTACTCCTGCCAAAGAGCCACACAAGATACCTCCTCCACCTCCCTTCCTCAAGAAGGAAAGTTCAAAGGTTGCTCCCGCTACTAGCAAGGCATCTAAGCATTGTGCAACTCCACTTAAGACTCCTATG : GCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAG : GATTAAAACACCGATTCATCCCACAGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGT : TTCCAAGTCTTTCACAGCCTACCGAAACAAATTACAATCACCAACTTTATCCACTCCTTTCTCACTGAGAACAGAAGAAAGAGCTGCACGAAGGAAACAG : AAGCTTGAAGAAAAATTCAATGCGAAGGAGGAAAAGAAGGTTCAACAACAAACAACATTAAAG : GAGAAAGCAGGAACGGAACTTAGGAAACTTGGACAAAGCTTTTGCTTCAAAGCTCGTCCCCTGCCTGATTTCTACAAGGAAACAGAAACAGCAAAAGATCATGCAAAAAAG : ATCCCAGTAACACAAGCTCCATTGCCCAAACGTGGAAGAATGCCATATCCCAGCTCAAAGCAAGGCTTAGTCTCGATGAAAAATGACTCTTGCAAGAATCCAAGAAAGAAGACTAGCTGAAAAAACTCACAAATCCATCACTCCTTGCAAAGAGTAGTGTCTTATTAGAATGTGTTTCAATTGGGTATTTCTTCCAAGAGAATGTTTTGGAGGTGTGTCTTTCCTTAATATGATTTAAGGAGAAGCAACTCCAAAATCTTGTATAAAAAGCTATCCAGACGTAAAATTATTTTAACCACAATCATTTACCTTTTATATTAACGTTCTCAAGTCAATATTGTCCTCATACATTCAAATT</gDNA_template>
            <first_frame> P  I  T  T  N  T  N  L  D  L  M  N  E  M  R  S  T  P  K  S  L  S  K  L  I  N  F  T  P  A  K  E  P  H  K  I  P  P  P  P  P  F  L  K  K  E  S  S  K  V  A  P  A  T  S  K  A  S  K  H  C  A  T  P  L  K  T  P  M  :  A  T  S  N  G  A  S  N  H  P  M  T  T  P  S  S  E  S  R  R :   I  K  T  P  I  H  P  T  A  S  G  S  I  T  A  G  P  K  W  N  I  L  S  S  V :   S  K  S  F  T  A  Y  R  N  K  L  Q  S  P  T  L  S  T  P  F  S  L  R  T  E  E  R  A  A  R  R  K  Q  :  K  L  E  E  K  F  N  A  K  E  E  K  K  V  Q  Q  Q  T  T  L  K  :  E  K  A  G  T  E  L  R  K  L  G  Q  S  F  C  F  K  A  R  P  L  P  D  F  Y  K  E  T  E  T  A  K  D  H  A  K  K  :  I  P  V  T  Q  A  P  L  P  K  R  G  R  M  P  Y  P  S  S  K  Q  G  L  V  S  M  K  N  D  S  C  K  N  P  R  K  K  T  S  *  K  N  S  Q  I  H  H  S  L  Q  R  V  V  S  Y  *  N  V  F  Q  L  G  I  S  S  K  R  M  F  W  R  C  V  F  P  *  Y  D  L  R  R  S  N  S  K  I  L  Y  K  K  L  S  R  R  K  I  I  L  T  T  I  I  Y  L  L  Y  *  R  S  Q  V  N  I  V  L  I  H  S  N  </first_frame>
            <second_frame>  Q  S  Q  L  I  L  T  W  T  *  *  M  K  *  D  Q  P  Q  N  L  *  A  S  *  S  T  L  L  L  P  K  S  H  T  R  Y  L  L  H  L  P  S  S  R  R  K  V  Q  R  L  L  P  L  L  A  R  H  L  S  I  V  Q  L  H  L  R  L  L  W :   Q  H  Q  M  V  H  Q  T  I  P  *  Q  R  H  L  Q  K  A  E   : G  L  K  H  R  F  I  P  Q  L  Q  E  V  *  Q  Q  G  L  N  G  T  F  C  L  L   : F  P  S  L  S  Q  P  T  E  T  N  Y  N  H  Q  L  Y  P  L  L  S  H  *  E  Q  K  K  E  L  H  E  G  N  R :   S  L  K  K  N  S  M  R  R  R  K  R  R  F  N  N  K  Q  H  *  R :   R  K  Q  E  R  N  L  G  N  L  D  K  A  F  A  S  K  L  V  P  C  L  I  S  T  R  K  Q  K  Q  Q  K  I  M  Q  K  R :   S  Q  *  H  K  L  H  C  P  N  V  E  E  C  H  I  P  A  Q  S  K  A  *  S  R  *  K  M  T  L  A  R  I  Q  E  R  R  L  A  E  K  T  H  K  S  I  T  P  C  K  E  *  C  L  I  R  M  C  F  N  W  V  F  L  P  R  E  C  F  G  G  V  S  F  L  N  M  I  *  G  E  A  T  P  K  S  C  I  K  S  Y  P  D  V  K  L  F  *  P  Q  S  F  T  F  Y  I  N  V  L  K  S  I  L  S  S  Y  I  Q  I </second_frame>
            <third_frame>   N  H  N  *  Y  *  L  G  L  D  E  *  N  E  I  N  P  K  I  F  E  Q  V  D  Q  L  Y  S  C  Q  R  A  T  Q  D  T  S  S  T  S  L  P  Q  E  G  K  F  K  G  C  S  R  Y  *  Q  G  I  *  A  L  C  N  S  T  *  D  S  Y   : G  N  I  K  W  C  I  K  P  S  H  D  N  A  I  F  R  K  Q  K  :  D  *  N  T  D  S  S  H  S  F  R  K  Y  N  S  R  A  *  M  E  H  F  V  F  C  :  F  Q  V  F  H  S  L  P  K  Q  I  T  I  T  N  F  I  H  S  F  L  T  E  N  R  R  K  S  C  T  K  E  T   : E  A  *  R  K  I  Q  C  E  G  G  K  E  G  S  T  T  N  N  I  K   : G  E  S  R  N  G  T  *  E  T  W  T  K  L  L  L  Q  S  S  S  P  A  *  F  L  Q  G  N  R  N  S  K  R  S  C  K  K   : D  P  S  N  T  S  S  I  A  Q  T  W  K  N  A  I  S  Q  L  K  A  R  L  S  L  D  E  K  *  L  L  Q  E  S  K  K  E  D  *  L  K  K  L  T  N  P  S  L  L  A  K  S  S  V  L  L  E  C  V  S  I  G  Y  F  F  Q  E  N  V  L  E  V  C  L  S  L  I  *  F  K  E  K  Q  L  Q  N  L  V  *  K  A  I  Q  T  *  N  Y  F  N  H  N  H  L  P  F  I  L  T  F  S  S  Q  Y  C  P  H  T  F  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8166" stop="7960"/>
                    <exon start="7870" stop="7812"/>
                    <exon start="7688" stop="7614"/>
                    <exon start="7220" stop="7121"/>
                    <exon start="7030" stop="6968"/>
                    <exon start="6479" stop="6369"/>
                    <exon start="6181" stop="6062"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>732</number_coding_nucleotides>
                  <number_encoded_amino_acids>244</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PITTNTNLDLMNEMRSTPKSLSKLINFTPAKEPHKIPPPPPFLKKESSKVAPATSKASKHCATPLKTPMATSNGASNHPMTTPSSESRRIKTPIHPTASGSITAGPKWNILSSVSKSFTAYRNKLQSPTLSTPFSLRTEERAARRKQKLEEKFNAKEEKKVQQQTTLKEKAGTELRKLGQSFCFKARPLPDFYKETETAKDHAKKIPVTQAPLPKRGRMPYPSSKQGLVSMKNDSCKNPRKKTS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="7872" e_stop="7206"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.909"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.909">
            <gDNA_exon_boundary e_start="7872" e_stop="7206" e_length="667"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7872" stop="7206"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560409" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGCAACATCAAATGGTGCATCAAACCATCCCATGACAACGCCATCTTCAGAAAGCAGAAGGTATATTTCCCTATATTGTCTAATTAGAATTGTTAGCAAGCATTTCATTGATTCCATTAATACATGGTTCTTTGGTTTTTTCCCACCTTCCCCACTCGAATTCTTGTATCTTCGTATTTACAGGATTAAAACACCGATTCATCCCACAGCTTCAGGAAGTATAACAGCAGGGCCTAAATGGAACATTTTGTCTTCTGTGTAAGTGCCTATTACATGATGACCTTAGATTCTAGCATAATCATTTATACATTTGAATGAATAGTAGTAGAGTGTTTTCGCTTTACGTTTAAAAACTGCTGGTTGAAGGTTCAAGCTAAGTGTAACCAGGCTCTGTCATAACTCAAAATAGGTATCTTTTAGTGGATACAGTTTGAGCACTTTTCCAGGACCAGGAAACCTTTTAAAGAGAATCTGAGAGACAGTTGTTTCTACTTGAATTTAGTTATCTTCCACACACATAAGTATGTTGGTGTGTGATGTGTCAAACTATCATGAACCAGGACAGTGATAATCTTCTTTCTGCAAGTATTTGATTATAGAGTATATAATTGCCTCATTGGATATCGCTTACCTTTGTTGTTCCTTGTTCAGTTCCAAGTCTTTCAC</gDNA_template>
            <first_frame> R  Q  H  Q  M  V  H  Q  T  I  P  *  Q  R  H  L  Q  K  A  E  G  I  F  P  Y  I  V  *  L  E  L  L  A  S  I  S  L  I  P  L  I  H  G  S  L  V  F  S  H  L  P  H  S  N  S  C  I  F  V  F  T  G  L  K  H  R  F  I  P  Q  L  Q  E  V  *  Q  Q  G  L  N  G  T  F  C  L  L  C  K  C  L  L  H  D  D  L  R  F  *  H  N  H  L  Y  I  *  M  N  S  S  R  V  F  S  L  Y  V  *  K  L  L  V  E  G  S  S  *  V  *  P  G  S  V  I  T  Q  N  R  Y  L  L  V  D  T  V  *  A  L  F  Q  D  Q  E  T  F  *  R  E  S  E  R  Q  L  F  L  L  E  F  S  Y  L  P  H  T  *  V  C  W  C  V  M  C  Q  T  I  M  N  Q  D  S  D  N  L  L  S  A  S  I  *  L  *  S  I  *  L  P  H  W  I  S  L  T  F  V  V  P  C  S  V  P  S  L  S  </first_frame>
            <second_frame>  G  N  I  K  W  C  I  K  P  S  H  D  N  A  I  F  R  K  Q  K  V  Y  F  P  I  L  S  N  *  N  C  *  Q  A  F  H  *  F  H  *  Y  M  V  L  W  F  F  P  T  F  P  T  R  I  L  V  S  S  Y  L  Q  D  *  N  T  D  S  S  H  S  F  R  K  Y  N  S  R  A  *  M  E  H  F  V  F  C  V  S  A  Y  Y  M  M  T  L  D  S  S  I  I  I  Y  T  F  E  *  I  V  V  E  C  F  R  F  T  F  K  N  C  W  L  K  V  Q  A  K  C  N  Q  A  L  S  *  L  K  I  G  I  F  *  W  I  Q  F  E  H  F  S  R  T  R  K  P  F  K  E  N  L  R  D  S  C  F  Y  L  N  L  V  I  F  H  T  H  K  Y  V  G  V  *  C  V  K  L  S  *  T  R  T  V  I  I  F  F  L  Q  V  F  D  Y  R  V  Y  N  C  L  I  G  Y  R  L  P  L  L  F  L  V  Q  F  Q  V  F  H </second_frame>
            <third_frame>   A  T  S  N  G  A  S  N  H  P  M  T  T  P  S  S  E  S  R  R  Y  I  S  L  Y  C  L  I  R  I  V  S  K  H  F  I  D  S  I  N  T  W  F  F  G  F  F  P  P  S  P  L  E  F  L  Y  L  R  I  Y  R  I  K  T  P  I  H  P  T  A  S  G  S  I  T  A  G  P  K  W  N  I  L  S  S  V  *  V  P  I  T  *  *  P  *  I  L  A  *  S  F  I  H  L  N  E  *  *  *  S  V  F  A  L  R  L  K  T  A  G  *  R  F  K  L  S  V  T  R  L  C  H  N  S  K  *  V  S  F  S  G  Y  S  L  S  T  F  P  G  P  G  N  L  L  K  R  I  *  E  T  V  V  S  T  *  I  *  L  S  S  T  H  I  S  M  L  V  C  D  V  S  N  Y  H  E  P  G  Q  *  *  S  S  F  C  K  Y  L  I  I  E  Y  I  I  A  S  L  D  I  A  Y  L  C  C  S  L  F  S  S  K  S  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7870" stop="7610"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ATSNGASNHPMTTPSSESRRYISLYCLIRIVSKHFIDSINTWFFGFFPPSPLEFLYLRIYRIKTPIHPTASGSITAGPKWNILSSV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="9642" PGL_stop="8719"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9642" e_stop="9352"/>
            <exon e_start="9255" e_stop="8719"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.972" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="9642" e_stop="9352" e_length="291"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.972">
            <gDNA_intron_boundary i_start="9351" i_stop="9256" i_length="96"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="9255" e_stop="8719" e_length="537"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9642" stop="9352"/>
              <exon start="9255" stop="9043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313252" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9642" stop="9352"/>
              <exon start="9255" stop="9075"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313212" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9573" stop="9352"/>
              <exon start="9255" stop="8719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314322" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9573" stop="9352"/>
              <exon start="9255" stop="8728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314435" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9500" stop="9352"/>
              <exon start="9255" stop="9160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318441" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9481" stop="9352"/>
              <exon start="9255" stop="8770"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728970" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9421" stop="9352"/>
              <exon start="9255" stop="8814"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312915" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGCACTTGGCCTAAATTTAAAAAAATGACACCTTTAGCTTCTTCTTACTCTATGAGTGGCCTTTCTTAAACAACGTGTATCGCTTTTTTTACATTTGAATTTCAAATTTAAATGCTGAGATCCAAAAACAGAGAGACAGATAAGAGCCATAAAAAATCATTTTTAAGTAACGGCACAATAATTATTCTGTTGATTTTTTCAGGTTCCATAGCAGACTGATGATGGAAGATTCAGCTTGTCTTATACATGCTTTCTCTTATGCTTCTGCTATACCCAATGAAATAAAACAG : GGAAACCCTGTGCATGCACTTGGGGAGTCAATTTCTTTTGGGAGATTTGTGTCTGAGTCTTTAGATTGGGAAAAATGGTCAACTTTTTCTCATAAAAGATATGTAGAGGAGGCTGAGAGGTATGCTAAGCCAGGTTCTGTTGCCCAAAAAAAAGCTTTCTTTGAAGCCCATTACAAGAAAATTGCTGCCCAAAAGGCTGCAGCTTTGCTTGAACAAGCCAATCAACAAAACCCCGATTCTGAAATTACCAAGAATTCAGCCCCTGATTCTACTTCACTTGTGAAACCTCATGTAGAAGCTAATCAAGAAGAGGTTCATGAGAACCCTGATGCTTTAACAACAGATTCCATGGTTAAGGCTTCTGTTTCAGTTGCTGATGTGGAGGAGATAGAGAGCGAGTCCCCAGTGGAGGGTCCAGGTACTCCTGAAGCTACAGAGAAAGAACCATCAAACCACATTGAGAATGGTGAAACCCAAGAAACAGTTTCTGAGATTAGTGAAACATCTCATACTGAGAAGCCTTTGCTGAAGACTAAG</gDNA_template>
            <first_frame> K  H  L  A  *  I  *  K  N  D  T  F  S  F  F  L  L  Y  E  W  P  F  L  N  N  V  Y  R  F  F  Y  I  *  I  S  N  L  N  A  E  I  Q  K  Q  R  D  R  *  E  P  *  K  I  I  F  K  *  R  H  N  N  Y  S  V  D  F  F  R  F  H  S  R  L  M  M  E  D  S  A  C  L  I  H  A  F  S  Y  A  S  A  I  P  N  E  I  K  Q  :  G  N  P  V  H  A  L  G  E  S  I  S  F  G  R  F  V  S  E  S  L  D  W  E  K  W  S  T  F  S  H  K  R  Y  V  E  E  A  E  R  Y  A  K  P  G  S  V  A  Q  K  K  A  F  F  E  A  H  Y  K  K  I  A  A  Q  K  A  A  A  L  L  E  Q  A  N  Q  Q  N  P  D  S  E  I  T  K  N  S  A  P  D  S  T  S  L  V  K  P  H  V  E  A  N  Q  E  E  V  H  E  N  P  D  A  L  T  T  D  S  M  V  K  A  S  V  S  V  A  D  V  E  E  I  E  S  E  S  P  V  E  G  P  G  T  P  E  A  T  E  K  E  P  S  N  H  I  E  N  G  E  T  Q  E  T  V  S  E  I  S  E  T  S  H  T  E  K  P  L  L  K  T  K </first_frame>
            <second_frame>  S  T  W  P  K  F  K  K  M  T  P  L  A  S  S  Y  S  M  S  G  L  S  *  T  T  C  I  A  F  F  T  F  E  F  Q  I  *  M  L  R  S  K  N  R  E  T  D  K  S  H  K  K  S  F  L  S  N  G  T  I  I  I  L  L  I  F  S  G  S  I  A  D  *  *  W  K  I  Q  L  V  L  Y  M  L  S  L  M  L  L  L  Y  P  M  K  *  N  R :   E  T  L  C  M  H  L  G  S  Q  F  L  L  G  D  L  C  L  S  L  *  I  G  K  N  G  Q  L  F  L  I  K  D  M  *  R  R  L  R  G  M  L  S  Q  V  L  L  P  K  K  K  L  S  L  K  P  I  T  R  K  L  L  P  K  R  L  Q  L  C  L  N  K  P  I  N  K  T  P  I  L  K  L  P  R  I  Q  P  L  I  L  L  H  L  *  N  L  M  *  K  L  I  K  K  R  F  M  R  T  L  M  L  *  Q  Q  I  P  W  L  R  L  L  F  Q  L  L  M  W  R  R  *  R  A  S  P  Q  W  R  V  Q  V  L  L  K  L  Q  R  K  N  H  Q  T  T  L  R  M  V  K  P  K  K  Q  F  L  R  L  V  K  H  L  I  L  R  S  L  C  *  R  L   </second_frame>
            <third_frame>   A  L  G  L  N  L  K  K  *  H  L  *  L  L  L  T  L  *  V  A  F  L  K  Q  R  V  S  L  F  L  H  L  N  F  K  F  K  C  *  D  P  K  T  E  R  Q  I  R  A  I  K  N  H  F  *  V  T  A  Q  *  L  F  C  *  F  F  Q  V  P  *  Q  T  D  D  G  R  F  S  L  S  Y  T  C  F  L  L  C  F  C  Y  T  Q  *  N  K  T   : G  K  P  C  A  C  T  W  G  V  N  F  F  W  E  I  C  V  *  V  F  R  L  G  K  M  V  N  F  F  S  *  K  I  C  R  G  G  *  E  V  C  *  A  R  F  C  C  P  K  K  S  F  L  *  S  P  L  Q  E  N  C  C  P  K  G  C  S  F  A  *  T  S  Q  S  T  K  P  R  F  *  N  Y  Q  E  F  S  P  *  F  Y  F  T  C  E  T  S  C  R  S  *  S  R  R  G  S  *  E  P  *  C  F  N  N  R  F  H  G  *  G  F  C  F  S  C  *  C  G  G  D  R  E  R  V  P  S  G  G  S  R  Y  S  *  S  Y  R  E  R  T  I  K  P  H  *  E  W  *  N  P  R  N  S  F  *  D  *  *  N  I  S  Y  *  E  A  F  A  E  D  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9471" stop="9352"/>
                    <exon start="9255" stop="8719"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>657</number_coding_nucleotides>
                  <number_encoded_amino_acids>219</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RHNNYSVDFFRFHSRLMMEDSACLIHAFSYASAIPNEIKQGNPVHALGESISFGRFVSESLDWEKWSTFSHKRYVEEAERYAKPGSVAQKKAFFEAHYKKIAAQKAAALLEQANQQNPDSEITKNSAPDSTSLVKPHVEANQEEVHENPDALTTDSMVKASVSVADVEEIESESPVEGPGTPEATEKEPSNHIENGETQETVSEISETSHTEKPLLKTK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="13645" PGL_stop="11156"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13613" e_stop="13533"/>
            <exon e_start="12115" e_stop="12008"/>
            <exon e_start="11847" e_stop="11783"/>
            <exon e_start="11696" e_stop="11226"/>
            <exon e_start="11162" e_stop="11156"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.970" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.667" e_score="1.000"/>
          <exon-intron don_prob="0.951" acc_prob="0.962" e_score="1.000"/>
          <exon-only e_score="0.857"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="13613" e_stop="13533" e_length="81"/>
          </exon>
          <intron i_serial="1" don_prob="0.970" acc_prob="0.971">
            <gDNA_intron_boundary i_start="13532" i_stop="12116" i_length="1417"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="12115" e_stop="12008" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.957" acc_prob="0.986">
            <gDNA_intron_boundary i_start="12007" i_stop="11848" i_length="160"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="11847" e_stop="11783" e_length="65"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.667">
            <gDNA_intron_boundary i_start="11782" i_stop="11697" i_length="86"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="11696" e_stop="11226" e_length="471"/>
          </exon>
          <intron i_serial="4" don_prob="0.951" acc_prob="0.962">
            <gDNA_intron_boundary i_start="11225" i_stop="11163" i_length="63"/>
          </intron>
          <exon e_serial="5" e_score="0.857">
            <gDNA_exon_boundary e_start="11162" e_stop="11156" e_length="7"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13613" stop="13533"/>
              <exon start="12115" stop="12008"/>
              <exon start="11847" stop="11783"/>
              <exon start="11696" stop="11226"/>
              <exon start="11162" stop="11156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390477" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13613" stop="13533"/>
              <exon start="12115" stop="12008"/>
              <exon start="11847" stop="11783"/>
              <exon start="11696" stop="11451"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396164" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13611" stop="13533"/>
              <exon start="12115" stop="12008"/>
              <exon start="11847" stop="11783"/>
              <exon start="11696" stop="11226"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E687976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13610" stop="13533"/>
              <exon start="12115" stop="12008"/>
              <exon start="11847" stop="11783"/>
              <exon start="11696" stop="11254"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328488" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13598" stop="13533"/>
              <exon start="12115" stop="12008"/>
              <exon start="11847" stop="11783"/>
              <exon start="11696" stop="11353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478742" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13591" stop="13533"/>
              <exon start="12115" stop="12008"/>
              <exon start="11847" stop="11783"/>
              <exon start="11696" stop="11239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13591" stop="13533"/>
              <exon start="12115" stop="12008"/>
              <exon start="11847" stop="11783"/>
              <exon start="11696" stop="11357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442955" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12105" stop="12008"/>
              <exon start="11847" stop="11783"/>
              <exon start="11696" stop="11226"/>
              <exon start="11162" stop="11156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390373" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12099" stop="12008"/>
              <exon start="11847" stop="11783"/>
              <exon start="11696" stop="11239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418848" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11836" stop="11783"/>
              <exon start="11696" stop="11226"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344223" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT : GTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAG : GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG : GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAA : AAAAAAG</gDNA_template>
            <first_frame> I  R  R  G  V  R  S  I  Y  T  T  V  D  S  P  R  L  T  R  F  A  L  Q  P  P  K  F  :  V  E  V  E  F  E  N  G  S  L  Y  K  L  S  A  E  Y  L  R  I  Y  S  P  A  V  D  S  K  I  R  S  I  C  G  E  K  :  V  I  S  G  R  R  H  V  G  I  M  S  A  E  P  I  G  N  Y  G  V  R :   L  L  F  D  D  L  H  K  T  G  I  F  T  W  D  Y  F  Y  H  L  G  S  N  K  F  A  L  M  R  N  Y  I  R  T  L  K  K  H  G  L  S  R  D  P  P  R  R  R  *  P  *  D  V  P  M  R  R  L  I  H  T  I  *  A  G  N  I  L  L  I  Y  A  Q  S  E  I  V  T  *  N  C  T  V  A  N  I  L  K  T  S  S  *  Y  V  I  I  C  S  G  I  F  V  V  C  Y  F  L  D  L  E  I  D  M  *  Y  K  R  G  H  *  F  L  R  N  I  K  E  P  L  R  L  *  F  R  F  G  K  H  V  G  V  A  E  Q  H  A  *  L  N  E  R  N  S  K  R  *  K :   K  K </first_frame>
            <second_frame>  S  G  E  V  F  E  A  Y  T  P  Q  *  I  L  H  A  S  P  D  L  L  F  N  L  L  N  L :   W  R  W  S  L  K  T  V  V  C  I  S  C  Q  L  S  I  *  E  Y  T  A  P  L  L  I  V  R  S  D  R  F  A  V  R  R :   S  Y  L  V  G  V  M  S  E  L  C  L  Q  N  L  L  E  I  M  E  *   : G  Y  Y  L  M  T  C  I  R  L  E  S  L  H  G  T  T  S  T  I  L  E  V  T  N  L  P  S  *  E  I  T  S  E  L  *  R  N  M  D  *  A  A  I  H  L  D  E  D  D  L  K  T  C  P  *  E  G  *  S  T  L  F  K  L  E  T  S  S  L  Y  M  L  R  V  K  L  *  H  K  T  V  L  L  Q  I  F  *  R  L  A  L  D  M  L  S  Y  V  Q  G  Y  L  W  C  A  I  F  *  I  *  R  L  T  C  D  T  K  E  V  I  S  F  *  G  T  L  R  N  L  F  V  C  N  L  D  L  G  S  M  L  V  L  Q  N  N  M  L  D  *  M  K  G  T  V  N  V  E   : K  K   </second_frame>
            <third_frame>   Q  E  R  C  S  K  H  I  H  H  S  R  F  S  T  P  H  Q  I  C  S  S  T  S  *  I   : C  G  G  G  V  *  K  R  *  S  V  *  V  V  S  *  V  F  E  N  I  Q  P  R  C  *  *  *  D  Q  I  D  L  R  *  E   : G  H  I  W  *  A  S  C  R  N  Y  V  C  R  T  Y  W  K  L  W  S  E  :  V  I  I  *  *  L  A  *  D  W  N  L  Y  M  G  L  L  L  P  S  W  K  *  Q  I  C  P  H  E  K  L  H  Q  N  S  E  E  T  W  T  K  P  R  S  T  *  T  K  M  T  L  R  R  A  H  E  K  A  D  P  H  Y  L  S  W  K  H  P  P  Y  I  C  S  E  *  N  C  D  I  K  L  Y  C  C  K  Y  S  K  D  *  L  L  I  C  Y  H  M  F  R  D  I  C  G  V  L  F  S  R  S  R  D  *  H  V  I  Q  K  R  S  L  V  S  K  E  H  *  G  T  S  S  F  V  I  *  I  W  E  A  C  W  C  C  R  T  T  C  L  I  E  *  K  E  Q  *  T  L  K  :  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13613" stop="13533"/>
                    <exon start="12115" stop="12008"/>
                    <exon start="11847" stop="11783"/>
                    <exon start="11696" stop="11549"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>399</number_coding_nucleotides>
                  <number_encoded_amino_acids>133</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IRRGVRSIYTTVDSPRLTRFALQPPKFVEVEFENGSLYKLSAEYLRIYSPAVDSKIRSICGEKVISGRRHVGIMSAEPIGNYGVRLLFDDLHKTGIFTWDYFYHLGSNKFALMRNYIRTLKKHGLSRDPPRRR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="13645" e_stop="13533"/>
            <exon e_start="12115" e_stop="12008"/>
            <exon e_start="11847" e_stop="11783"/>
            <exon e_start="11696" e_stop="11222"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.970" acc_prob="0.971" e_score="0.982"/>
          <exon-intron don_prob="0.957" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.667" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="13645" e_stop="13533" e_length="113"/>
          </exon>
          <intron i_serial="1" don_prob="0.970" acc_prob="0.971">
            <gDNA_intron_boundary i_start="13532" i_stop="12116" i_length="1417"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="12115" e_stop="12008" e_length="108"/>
          </exon>
          <intron i_serial="2" don_prob="0.957" acc_prob="0.986">
            <gDNA_intron_boundary i_start="12007" i_stop="11848" i_length="160"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="11847" e_stop="11783" e_length="65"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.667">
            <gDNA_intron_boundary i_start="11782" i_stop="11697" i_length="86"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="11696" e_stop="11222" e_length="475"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13645" stop="13533"/>
              <exon start="12115" stop="12008"/>
              <exon start="11847" stop="11783"/>
              <exon start="11696" stop="11222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13613" stop="13533"/>
              <exon start="12115" stop="12008"/>
              <exon start="11847" stop="11783"/>
              <exon start="11696" stop="11451"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396164" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13611" stop="13533"/>
              <exon start="12115" stop="12008"/>
              <exon start="11847" stop="11783"/>
              <exon start="11696" stop="11226"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E687976" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13610" stop="13533"/>
              <exon start="12115" stop="12008"/>
              <exon start="11847" stop="11783"/>
              <exon start="11696" stop="11254"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328488" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13598" stop="13533"/>
              <exon start="12115" stop="12008"/>
              <exon start="11847" stop="11783"/>
              <exon start="11696" stop="11353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E478742" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13591" stop="13533"/>
              <exon start="12115" stop="12008"/>
              <exon start="11847" stop="11783"/>
              <exon start="11696" stop="11239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13591" stop="13533"/>
              <exon start="12115" stop="12008"/>
              <exon start="11847" stop="11783"/>
              <exon start="11696" stop="11357"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442955" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12099" stop="12008"/>
              <exon start="11847" stop="11783"/>
              <exon start="11696" stop="11239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E418848" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11836" stop="11783"/>
              <exon start="11696" stop="11226"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344223" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAGGGAGATTCGACTTACGGAAAATGAATGTGATCAGGAGAGGTGTTCGAAGCATATACACCACAGTAGATTCTCCACGCCTCACCAGATTTGCTCTTCAACCTCCTAAATTT : GTGGAGGTGGAGTTTGAAAACGGTAGTCTGTATAAGTTGTCAGCTGAGTATTTGAGAATATACAGCCCCGCTGTTGATAGTAAGATCAGATCGATTTGCGGTGAGAAG : GTCATATCTGGTAGGCGTCATGTCGGAATTATGTCTGCAGAACCTATTGGAAATTATGGAGTGAG : GTTATTATTTGATGACTTGCATAAGACTGGAATCTTTACATGGGACTACTTCTACCATCTTGGAAGTAACAAATTTGCCCTCATGAGAAATTACATCAGAACTCTGAAGAAACATGGACTAAGCCGCGATCCACCTAGACGAAGATGACCTTAAGACGTGCCCATGAGAAGGCTGATCCACACTATTTAAGCTGGAAACATCCTCCTTATATATGCTCAGAGTGAAATTGTGACATAAAACTGTACTGTTGCAAATATTCTAAAGACTAGCTCTTGATATGTTATCATATGTTCAGGGATATTTGTGGTGTGCTATTTTCTAGATCTAGAGATTGACATGTGATACAAAAGAGGTCATTAGTTTCTAAGGAACATTAAGGAACCTCTTCGTTTGTAATTTAGATTTGGGAAGCATGTTGGTGTTGCAGAACAACATGCTTGATTGAATGAAAGGAACAGTAAACGTTGAAAGTTT</gDNA_template>
            <first_frame> *  G  D  S  T  Y  G  K  *  M  *  S  G  E  V  F  E  A  Y  T  P  Q  *  I  L  H  A  S  P  D  L  L  F  N  L  L  N  L :   W  R  W  S  L  K  T  V  V  C  I  S  C  Q  L  S  I  *  E  Y  T  A  P  L  L  I  V  R  S  D  R  F  A  V  R  R :   S  Y  L  V  G  V  M  S  E  L  C  L  Q  N  L  L  E  I  M  E  *   : G  Y  Y  L  M  T  C  I  R  L  E  S  L  H  G  T  T  S  T  I  L  E  V  T  N  L  P  S  *  E  I  T  S  E  L  *  R  N  M  D  *  A  A  I  H  L  D  E  D  D  L  K  T  C  P  *  E  G  *  S  T  L  F  K  L  E  T  S  S  L  Y  M  L  R  V  K  L  *  H  K  T  V  L  L  Q  I  F  *  R  L  A  L  D  M  L  S  Y  V  Q  G  Y  L  W  C  A  I  F  *  I  *  R  L  T  C  D  T  K  E  V  I  S  F  *  G  T  L  R  N  L  F  V  C  N  L  D  L  G  S  M  L  V  L  Q  N  N  M  L  D  *  M  K  G  T  V  N  V  E  S   </first_frame>
            <second_frame>  R  E  I  R  L  T  E  N  E  C  D  Q  E  R  C  S  K  H  I  H  H  S  R  F  S  T  P  H  Q  I  C  S  S  T  S  *  I   : C  G  G  G  V  *  K  R  *  S  V  *  V  V  S  *  V  F  E  N  I  Q  P  R  C  *  *  *  D  Q  I  D  L  R  *  E   : G  H  I  W  *  A  S  C  R  N  Y  V  C  R  T  Y  W  K  L  W  S  E  :  V  I  I  *  *  L  A  *  D  W  N  L  Y  M  G  L  L  L  P  S  W  K  *  Q  I  C  P  H  E  K  L  H  Q  N  S  E  E  T  W  T  K  P  R  S  T  *  T  K  M  T  L  R  R  A  H  E  K  A  D  P  H  Y  L  S  W  K  H  P  P  Y  I  C  S  E  *  N  C  D  I  K  L  Y  C  C  K  Y  S  K  D  *  L  L  I  C  Y  H  M  F  R  D  I  C  G  V  L  F  S  R  S  R  D  *  H  V  I  Q  K  R  S  L  V  S  K  E  H  *  G  T  S  S  F  V  I  *  I  W  E  A  C  W  C  C  R  T  T  C  L  I  E  *  K  E  Q  *  T  L  K  V  </second_frame>
            <third_frame>   G  R  F  D  L  R  K  M  N  V  I  R  R  G  V  R  S  I  Y  T  T  V  D  S  P  R  L  T  R  F  A  L  Q  P  P  K  F  :  V  E  V  E  F  E  N  G  S  L  Y  K  L  S  A  E  Y  L  R  I  Y  S  P  A  V  D  S  K  I  R  S  I  C  G  E  K  :  V  I  S  G  R  R  H  V  G  I  M  S  A  E  P  I  G  N  Y  G  V  R :   L  L  F  D  D  L  H  K  T  G  I  F  T  W  D  Y  F  Y  H  L  G  S  N  K  F  A  L  M  R  N  Y  I  R  T  L  K  K  H  G  L  S  R  D  P  P  R  R  R  *  P  *  D  V  P  M  R  R  L  I  H  T  I  *  A  G  N  I  L  L  I  Y  A  Q  S  E  I  V  T  *  N  C  T  V  A  N  I  L  K  T  S  S  *  Y  V  I  I  C  S  G  I  F  V  V  C  Y  F  L  D  L  E  I  D  M  *  Y  K  R  G  H  *  F  L  R  N  I  K  E  P  L  R  L  *  F  R  F  G  K  H  V  G  V  A  E  Q  H  A  *  L  N  E  R  N  S  K  R  *  K  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13643" stop="13533"/>
                    <exon start="12115" stop="12008"/>
                    <exon start="11847" stop="11783"/>
                    <exon start="11696" stop="11549"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>429</number_coding_nucleotides>
                  <number_encoded_amino_acids>143</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GRFDLRKMNVIRRGVRSIYTTVDSPRLTRFALQPPKFVEVEFENGSLYKLSAEYLRIYSPAVDSKIRSICGEKVISGRRHVGIMSAEPIGNYGVRLLFDDLHKTGIFTWDYFYHLGSNKFALMRNYIRTLKKHGLSRDPPRRR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="24635" PGL_stop="25449"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24635" e_stop="24694"/>
            <exon e_start="24819" e_stop="25449"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.976" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24635" e_stop="24694" e_length="60"/>
          </exon>
          <intron i_serial="1" don_prob="0.976" acc_prob="0.998">
            <gDNA_intron_boundary i_start="24695" i_stop="24818" i_length="124"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="24819" e_stop="25449" e_length="631"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24635" stop="24694"/>
              <exon start="24819" stop="25449"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710437" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTTCTTCTGGTGTATCCTCTGCTTTGCTGCCTTCACTTTCTCTTCTCTACTATTTCAAG : GGTTTCATCAATGGCGGCCGGCGACAACCACAGCCCTAACCGCTGTTAAGCCAATTATACAAACCGTCGAATTCCCGGACGAGACAGTTGTTTTCCTAAAATACCCTCCTTCAACTCCCTTATTCACAAAACATGACCTATACTGCCTCTACCTTGATCCTAACTCTTCTCAACCTCCTGAATCAGTTGAAAACGATGAATTATTGGCCCAACAGCTCGTTCGATGTCCCCTGGTTAAGCCACGTGGAGTCCTGACGTCACTTTTCGTCAAGTCTACCGGTTACACCCTCTCCATTGGACCATCACGTCGGTGGAATTCGTTGGCCTATGAGGCCATGATCGATCGCGATAACACGACCATAGTGTTTGTTAAAGGGTTTAATCTTCGTGGTGGAAGACAATCGCACGCTTCAAAATTCAAGTGTGTTTATGGTTGGGATGTTAAGAATCCCAAACTTGTGTTACAATCAGATGTTGTATCCATTGCTCAAGAAGTTGTTCGATGTAATACCCCAGTGAGCATACTGAATAATCCAGAGAGGTTTATTGGTACTAGTAACATGCCCATTAAGGTTTCTGTTAGAATGGTTGGTAAGGAACCTTTAGACTCTATAGCGAGTCCTAAACGCCG</gDNA_template>
            <first_frame> L  S  S  G  V  S  S  A  L  L  P  S  L  S  L  L  Y  Y  F  K  :  G  F  I  N  G  G  R  R  Q  P  Q  P  *  P  L  L  S  Q  L  Y  K  P  S  N  S  R  T  R  Q  L  F  S  *  N  T  L  L  Q  L  P  Y  S  Q  N  M  T  Y  T  A  S  T  L  I  L  T  L  L  N  L  L  N  Q  L  K  T  M  N  Y  W  P  N  S  S  F  D  V  P  W  L  S  H  V  E  S  *  R  H  F  S  S  S  L  P  V  T  P  S  P  L  D  H  H  V  G  G  I  R  W  P  M  R  P  *  S  I  A  I  T  R  P  *  C  L  L  K  G  L  I  F  V  V  E  D  N  R  T  L  Q  N  S  S  V  F  M  V  G  M  L  R  I  P  N  L  C  Y  N  Q  M  L  Y  P  L  L  K  K  L  F  D  V  I  P  Q  *  A  Y  *  I  I  Q  R  G  L  L  V  L  V  T  C  P  L  R  F  L  L  E  W  L  V  R  N  L  *  T  L  *  R  V  L  N  A  </first_frame>
            <second_frame>  F  L  L  V  Y  P  L  L  C  C  L  H  F  L  F  S  T  I  S  R :   V  S  S  M  A  A  G  D  N  H  S  P  N  R  C  *  A  N  Y  T  N  R  R  I  P  G  R  D  S  C  F  P  K  I  P  S  F  N  S  L  I  H  K  T  *  P  I  L  P  L  P  *  S  *  L  F  S  T  S  *  I  S  *  K  R  *  I  I  G  P  T  A  R  S  M  S  P  G  *  A  T  W  S  P  D  V  T  F  R  Q  V  Y  R  L  H  P  L  H  W  T  I  T  S  V  E  F  V  G  L  *  G  H  D  R  S  R  *  H  D  H  S  V  C  *  R  V  *  S  S  W  W  K  T  I  A  R  F  K  I  Q  V  C  L  W  L  G  C  *  E  S  Q  T  C  V  T  I  R  C  C  I  H  C  S  R  S  C  S  M  *  Y  P  S  E  H  T  E  *  S  R  E  V  Y  W  Y  *  *  H  A  H  *  G  F  C  *  N  G  W  *  G  T  F  R  L  Y  S  E  S  *  T  P </second_frame>
            <third_frame>   F  F  W  C  I  L  C  F  A  A  F  T  F  S  S  L  L  F  Q   : G  F  H  Q  W  R  P  A  T  T  T  A  L  T  A  V  K  P  I  I  Q  T  V  E  F  P  D  E  T  V  V  F  L  K  Y  P  P  S  T  P  L  F  T  K  H  D  L  Y  C  L  Y  L  D  P  N  S  S  Q  P  P  E  S  V  E  N  D  E  L  L  A  Q  Q  L  V  R  C  P  L  V  K  P  R  G  V  L  T  S  L  F  V  K  S  T  G  Y  T  L  S  I  G  P  S  R  R  W  N  S  L  A  Y  E  A  M  I  D  R  D  N  T  T  I  V  F  V  K  G  F  N  L  R  G  G  R  Q  S  H  A  S  K  F  K  C  V  Y  G  W  D  V  K  N  P  K  L  V  L  Q  S  D  V  V  S  I  A  Q  E  V  V  R  C  N  T  P  V  S  I  L  N  N  P  E  R  F  I  G  T  S  N  M  P  I  K  V  S  V  R  M  V  G  K  E  P  L  D  S  I  A  S  P  K  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24637" stop="24694"/>
                    <exon start="24819" stop="25447"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>687</number_coding_nucleotides>
                  <number_encoded_amino_acids>229</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFWCILCFAAFTFSSLLFQGFHQWRPATTTALTAVKPIIQTVEFPDETVVFLKYPPSTPLFTKHDLYCLYLDPNSSQPPESVENDELLAQQLVRCPLVKPRGVLTSLFVKSTGYTLSIGPSRRWNSLAYEAMIDRDNTTIVFVKGFNLRGGRQSHASKFKCVYGWDVKNPKLVLQSDVVSIAQEVVRCNTPVSILNNPERFIGTSNMPIKVSVRMVGKEPLDSIASPKR</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="25498" PGL_stop="26080"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25498" e_stop="26080"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.942"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.942">
            <gDNA_exon_boundary e_start="25498" e_stop="26080" e_length="583"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25498" stop="26080"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420334" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACAATGTTAAGAAACCAGGCCAGCTTCTTGAAAGAGTGGATCATGTACCATACTAGAATCGGAGTACAGCGTTGGTTCATTTATGATAATAACAGCTTGGACGATATTGATGATGTCATTAAGCTATTATCGAACATAAATGTGACACGACATGTTTGGCCTTGGATCAAGACTCAAGAGGCAGGTTTTGCTCATTGTGCATTACGAGCTAGAGATGTGTGTGAATGGGTTGGTTTTATGGATGTGGATGAGTTCTTCCACTTGCCTACTGGTATGTCACTGCTTGACATATTAAGAAACCAATCAAGGAGTAATAGTAAAGTTGCTGAGTTGCGGGTGTCATGTCATAATTTTGGACCATCTGGTCTCAAACATGTCCCGACACAAGGGGTCACCATGGGGTACAATTGCAGGATGATTGCACCTGAGAGGCATAAGAGTATTGTGAAACCTGAAGCATTGAATTCAACATTAATCAATGTGGTTCACCATTTTCATTTAAAGTCTGAGTTTAGATATGCCAATATGGATAGAAATGTGCTTGTGATTAACCATTACAAGTATCAAGTTTGGGATGTCTTC</gDNA_template>
            <first_frame> H  N  V  K  K  P  G  Q  L  L  E  R  V  D  H  V  P  Y  *  N  R  S  T  A  L  V  H  L  *  *  *  Q  L  G  R  Y  *  *  C  H  *  A  I  I  E  H  K  C  D  T  T  C  L  A  L  D  Q  D  S  R  G  R  F  C  S  L  C  I  T  S  *  R  C  V  *  M  G  W  F  Y  G  C  G  *  V  L  P  L  A  Y  W  Y  V  T  A  *  H  I  K  K  P  I  K  E  *  *  *  S  C  *  V  A  G  V  M  S  *  F  W  T  I  W  S  Q  T  C  P  D  T  R  G  H  H  G  V  Q  L  Q  D  D  C  T  *  E  A  *  E  Y  C  E  T  *  S  I  E  F  N  I  N  Q  C  G  S  P  F  S  F  K  V  *  V  *  I  C  Q  Y  G  *  K  C  A  C  D  *  P  L  Q  V  S  S  L  G  C  L  </first_frame>
            <second_frame>  T  M  L  R  N  Q  A  S  F  L  K  E  W  I  M  Y  H  T  R  I  G  V  Q  R  W  F  I  Y  D  N  N  S  L  D  D  I  D  D  V  I  K  L  L  S  N  I  N  V  T  R  H  V  W  P  W  I  K  T  Q  E  A  G  F  A  H  C  A  L  R  A  R  D  V  C  E  W  V  G  F  M  D  V  D  E  F  F  H  L  P  T  G  M  S  L  L  D  I  L  R  N  Q  S  R  S  N  S  K  V  A  E  L  R  V  S  C  H  N  F  G  P  S  G  L  K  H  V  P  T  Q  G  V  T  M  G  Y  N  C  R  M  I  A  P  E  R  H  K  S  I  V  K  P  E  A  L  N  S  T  L  I  N  V  V  H  H  F  H  L  K  S  E  F  R  Y  A  N  M  D  R  N  V  L  V  I  N  H  Y  K  Y  Q  V  W  D  V  F </second_frame>
            <third_frame>   Q  C  *  E  T  R  P  A  S  *  K  S  G  S  C  T  I  L  E  S  E  Y  S  V  G  S  F  M  I  I  T  A  W  T  I  L  M  M  S  L  S  Y  Y  R  T  *  M  *  H  D  M  F  G  L  G  S  R  L  K  R  Q  V  L  L  I  V  H  Y  E  L  E  M  C  V  N  G  L  V  L  W  M  W  M  S  S  S  T  C  L  L  V  C  H  C  L  T  Y  *  E  T  N  Q  G  V  I  V  K  L  L  S  C  G  C  H  V  I  I  L  D  H  L  V  S  N  M  S  R  H  K  G  S  P  W  G  T  I  A  G  *  L  H  L  R  G  I  R  V  L  *  N  L  K  H  *  I  Q  H  *  S  M  W  F  T  I  F  I  *  S  L  S  L  D  M  P  I  W  I  E  M  C  L  *  L  T  I  T  S  I  K  F  G  M  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25499" stop="26080"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>582</number_coding_nucleotides>
                  <number_encoded_amino_acids>194</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMLRNQASFLKEWIMYHTRIGVQRWFIYDNNSLDDIDDVIKLLSNINVTRHVWPWIKTQEAGFAHCALRARDVCEWVGFMDVDEFFHLPTGMSLLDILRNQSRSNSKVAELRVSCHNFGPSGLKHVPTQGVTMGYNCRMIAPERHKSIVKPEALNSTLINVVHHFHLKSEFRYANMDRNVLVINHYKYQVWDVF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="26472" PGL_stop="25954"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26472" e_stop="25954"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.904"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.904">
            <gDNA_exon_boundary e_start="26472" e_stop="25954" e_length="519"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26472" stop="25954"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420335" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGATACATTGAACATTCAACTTCCATTTTCATATTACCTTTGTGTTGTGACGTAAATTGATGTACAAAAAGAATATATGGACTATTTCATGTACAAATAAAATAGCAAAAGAAATTAGATCCTCAAAGTCAAAAACTGATATGAAATAATTTCATGTTGCGGCGTCATGTCAGTGATTTTTGCCAGGGTAACTTGCCAGTGTTTGGGTCGGTGAACATCTCTGCTACTCGATCTTTTAGGCCAGTGTCAGTAACTTCACAAAATCGACTAGACCAATCTGGTGGTTCAACGGCTCGTGTCCCTAAACCAGGGGCACGATCCCTGGACCCAACATTTCTCTGTTGTTGCCAATCAGAAACATAAGTAGCCACCCTCCTGTAGAACTTCTCCTTGAAGACATCCCAAACTTGATACTTGTAATGGTTAATCACAAGCACATTTCTATCCATATTGGCATATCTAAACTCAGACTTTAAATGAAAATGGTGAACCACATTGATTAATGTTGAATTCAATGCT</gDNA_template>
            <first_frame> R  Y  I  E  H  S  T  S  I  F  I  L  P  L  C  C  D  V  N  *  C  T  K  R  I  Y  G  L  F  H  V  Q  I  K  *  Q  K  K  L  D  P  Q  S  Q  K  L  I  *  N  N  F  M  L  R  R  H  V  S  D  F  C  Q  G  N  L  P  V  F  G  S  V  N  I  S  A  T  R  S  F  R  P  V  S  V  T  S  Q  N  R  L  D  Q  S  G  G  S  T  A  R  V  P  K  P  G  A  R  S  L  D  P  T  F  L  C  C  C  Q  S  E  T  *  V  A  T  L  L  *  N  F  S  L  K  T  S  Q  T  *  Y  L  *  W  L  I  T  S  T  F  L  S  I  L  A  Y  L  N  S  D  F  K  *  K  W  *  T  T  L  I  N  V  E  F  N  A </first_frame>
            <second_frame>  D  T  L  N  I  Q  L  P  F  S  Y  Y  L  C  V  V  T  *  I  D  V  Q  K  E  Y  M  D  Y  F  M  Y  K  *  N  S  K  R  N  *  I  L  K  V  K  N  *  Y  E  I  I  S  C  C  G  V  M  S  V  I  F  A  R  V  T  C  Q  C  L  G  R  *  T  S  L  L  L  D  L  L  G  Q  C  Q  *  L  H  K  I  D  *  T  N  L  V  V  Q  R  L  V  S  L  N  Q  G  H  D  P  W  T  Q  H  F  S  V  V  A  N  Q  K  H  K  *  P  P  S  C  R  T  S  P  *  R  H  P  K  L  D  T  C  N  G  *  S  Q  A  H  F  Y  P  Y  W  H  I  *  T  Q  T  L  N  E  N  G  E  P  H  *  L  M  L  N  S  M   </second_frame>
            <third_frame>   I  H  *  T  F  N  F  H  F  H  I  T  F  V  L  *  R  K  L  M  Y  K  K  N  I  W  T  I  S  C  T  N  K  I  A  K  E  I  R  S  S  K  S  K  T  D  M  K  *  F  H  V  A  A  S  C  Q  *  F  L  P  G  *  L  A  S  V  W  V  G  E  H  L  C  Y  S  I  F  *  A  S  V  S  N  F  T  K  S  T  R  P  I  W  W  F  N  G  S  C  P  *  T  R  G  T  I  P  G  P  N  I  S  L  L  L  P  I  R  N  I  S  S  H  P  P  V  E  L  L  L  E  D  I  P  N  L  I  L  V  M  V  N  H  K  H  I  S  I  H  I  G  I  S  K  L  R  L  *  M  K  M  V  N  H  I  D  *  C  *  I  Q  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26328" stop="26110"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NNFMLRRHVSDFCQGNLPVFGSVNISATRSFRPVSVTSQNRLDQSGGSTARVPKPGARSLDPTFLCCCQSET*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="28905" PGL_stop="27312"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28905" e_stop="28720"/>
            <exon e_start="28555" e_stop="28473"/>
            <exon e_start="28401" e_stop="28172"/>
            <exon e_start="28051" e_stop="28002"/>
            <exon e_start="27897" e_stop="27823"/>
            <exon e_start="27513" e_stop="27312"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.986" acc_prob="0.997" e_score="0.984"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.961" e_score="1.000"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="28905" e_stop="28720" e_length="186"/>
          </exon>
          <intron i_serial="1" don_prob="0.986" acc_prob="0.997">
            <gDNA_intron_boundary i_start="28719" i_stop="28556" i_length="164"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28555" e_stop="28473" e_length="83"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="28472" i_stop="28402" i_length="71"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28401" e_stop="28172" e_length="230"/>
          </exon>
          <intron i_serial="3" don_prob="0.956" acc_prob="0.999">
            <gDNA_intron_boundary i_start="28171" i_stop="28052" i_length="120"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="28051" e_stop="28002" e_length="50"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="28001" i_stop="27898" i_length="104"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="27897" e_stop="27823" e_length="75"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="0.961">
            <gDNA_intron_boundary i_start="27822" i_stop="27514" i_length="309"/>
          </intron>
          <exon e_serial="6" e_score="0.980">
            <gDNA_exon_boundary e_start="27513" e_stop="27312" e_length="202"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28905" stop="28720"/>
              <exon start="28555" stop="28473"/>
              <exon start="28401" stop="28172"/>
              <exon start="28051" stop="28002"/>
              <exon start="27897" stop="27823"/>
              <exon start="27513" stop="27312"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E730854" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGAGATGATAAAGTCGAAGGGTTGCTGAGCCCCAAGTTCCGGTCGGTGGCAGCTATGGCTGGTTGGGATGAAGAGGCTCTTCTCATGGCCAGTCTTGTTGTCGAAGACACACCTGATCGCCTTTCTAAGCAAAAGAAACGTTCTGATTTGCTGCATTTCAAGACTCCCCCAACAAATTCTAGAAG : GAAAAGAAGGGCTCAGAAAAGGAGCCCTGCGTCCATAACTGCAACTGTTCTTGATCTGGAAGACCAAGACACTGCAAAGCAAG : AAAGCGAGAAAAAGGAGGCAGAATTGAAATTAGACGAGAAAGGAGATGAGGCATTGGAAGAACAGGGTTGTTCTGTTGCTACATCTTCTACTAAGAAGATAGAACCAAAATCCATTGAGAAAGCAGACACGAAAGAAGCTGAAGCATCAGAGGAACAGGGGTGTTCTGTTTCTTCTTCTTCTGCAGCATTTCCCTCCATTGATCTACTTCGTGAAGAGCTTTCTTGTGCT : ATTTGTTTGGAGATCTGTTTTGAACCGAGTACCACTCCTTGTGGTCACAG : TTTTTGTAAGAAGTGTTTGCGATCTGCTGCTGATAAATGTGGAAAGAAATGTCCCAAGTGCAGGCAGCTTATCAG : CAATGGTAGATCATGCACTGTAAATACAGTACTTTGGAATACAATTCAACTGTTGTTTCCCAAAGAAGTAGAAACAAGAAAAGCAGCTGCTGATTTGAGTAGTAGAGAAGCTAAACGTCAAAGTCCAGTAAGAGCTGTTGCTACTCATTCTAACAGCAGAACGACAAGAGTCCTGCTACTTAACAGTCCAGAATCTGGTCCT</gDNA_template>
            <first_frame> W  R  *  *  S  R  R  V  A  E  P  Q  V  P  V  G  G  S  Y  G  W  L  G  *  R  G  S  S  H  G  Q  S  C  C  R  R  H  T  *  S  P  F  *  A  K  E  T  F  *  F  A  A  F  Q  D  S  P  N  K  F  *  K  :  E  K  K  G  S  E  K  E  P  C  V  H  N  C  N  C  S  *  S  G  R  P  R  H  C  K  A  R :   K  R  E  K  G  G  R  I  E  I  R  R  E  R  R  *  G  I  G  R  T  G  L  F  C  C  Y  I  F  Y  *  E  D  R  T  K  I  H  *  E  S  R  H  E  R  S  *  S  I  R  G  T  G  V  F  C  F  F  F  F  C  S  I  S  L  H  *  S  T  S  *  R  A  F  L  C   : Y  L  F  G  D  L  F  *  T  E  Y  H  S  L  W  S  Q  :  F  L  *  E  V  F  A  I  C  C  *  *  M  W  K  E  M  S  Q  V  Q  A  A  Y  Q  :  Q  W  *  I  M  H  C  K  Y  S  T  L  E  Y  N  S  T  V  V  S  Q  R  S  R  N  K  K  S  S  C  *  F  E  *  *  R  S  *  T  S  K  S  S  K  S  C  C  Y  S  F  *  Q  Q  N  D  K  S  P  A  T  *  Q  S  R  I  W  S  </first_frame>
            <second_frame>  G  D  D  K  V  E  G  L  L  S  P  K  F  R  S  V  A  A  M  A  G  W  D  E  E  A  L  L  M  A  S  L  V  V  E  D  T  P  D  R  L  S  K  Q  K  K  R  S  D  L  L  H  F  K  T  P  P  T  N  S  R  R :   K  R  R  A  Q  K  R  S  P  A  S  I  T  A  T  V  L  D  L  E  D  Q  D  T  A  K  Q   : E  S  E  K  K  E  A  E  L  K  L  D  E  K  G  D  E  A  L  E  E  Q  G  C  S  V  A  T  S  S  T  K  K  I  E  P  K  S  I  E  K  A  D  T  K  E  A  E  A  S  E  E  Q  G  C  S  V  S  S  S  S  A  A  F  P  S  I  D  L  L  R  E  E  L  S  C  A  :  I  C  L  E  I  C  F  E  P  S  T  T  P  C  G  H  S :   F  C  K  K  C  L  R  S  A  A  D  K  C  G  K  K  C  P  K  C  R  Q  L  I  S :   N  G  R  S  C  T  V  N  T  V  L  W  N  T  I  Q  L  L  F  P  K  E  V  E  T  R  K  A  A  A  D  L  S  S  R  E  A  K  R  Q  S  P  V  R  A  V  A  T  H  S  N  S  R  T  T  R  V  L  L  L  N  S  P  E  S  G  P </second_frame>
            <third_frame>   E  M  I  K  S  K  G  C  *  A  P  S  S  G  R  W  Q  L  W  L  V  G  M  K  R  L  F  S  W  P  V  L  L  S  K  T  H  L  I  A  F  L  S  K  R  N  V  L  I  C  C  I  S  R  L  P  Q  Q  I  L  E   : G  K  E  G  L  R  K  G  A  L  R  P  *  L  Q  L  F  L  I  W  K  T  K  T  L  Q  S  K  :  K  A  R  K  R  R  Q  N  *  N  *  T  R  K  E  M  R  H  W  K  N  R  V  V  L  L  L  H  L  L  L  R  R  *  N  Q  N  P  L  R  K  Q  T  R  K  K  L  K  H  Q  R  N  R  G  V  L  F  L  L  L  L  Q  H  F  P  P  L  I  Y  F  V  K  S  F  L  V  L :   F  V  W  R  S  V  L  N  R  V  P  L  L  V  V  T   : V  F  V  R  S  V  C  D  L  L  L  I  N  V  E  R  N  V  P  S  A  G  S  L  S   : A  M  V  D  H  A  L  *  I  Q  Y  F  G  I  Q  F  N  C  C  F  P  K  K  *  K  Q  E  K  Q  L  L  I  *  V  V  E  K  L  N  V  K  V  Q  *  E  L  L  L  L  I  L  T  A  E  R  Q  E  S  C  Y  L  T  V  Q  N  L  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28904" stop="28720"/>
                    <exon start="28555" stop="28473"/>
                    <exon start="28401" stop="28172"/>
                    <exon start="28051" stop="28002"/>
                    <exon start="27897" stop="27823"/>
                    <exon start="27513" stop="27312"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>825</number_coding_nucleotides>
                  <number_encoded_amino_acids>275</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GDDKVEGLLSPKFRSVAAMAGWDEEALLMASLVVEDTPDRLSKQKKRSDLLHFKTPPTNSRRKRRAQKRSPASITATVLDLEDQDTAKQESEKKEAELKLDEKGDEALEEQGCSVATSSTKKIEPKSIEKADTKEAEASEEQGCSVSSSSAAFPSIDLLREELSCAICLEICFEPSTTPCGHSFCKKCLRSAADKCGKKCPKCRQLISNGRSCTVNTVLWNTIQLLFPKEVETRKAAADLSSREAKRQSPVRAVATHSNSRTTRVLLLNSPESGP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="42143" PGL_stop="29342"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="42143" e_stop="41976"/>
            <exon e_start="41803" e_stop="41458"/>
            <exon e_start="40062" e_stop="39817"/>
            <exon e_start="38998" e_stop="38808"/>
            <exon e_start="38725" e_stop="38554"/>
            <exon e_start="36774" e_stop="36637"/>
            <exon e_start="36557" e_stop="36380"/>
            <exon e_start="36239" e_stop="36094"/>
            <exon e_start="35884" e_stop="35708"/>
            <exon e_start="35607" e_stop="35497"/>
            <exon e_start="35070" e_stop="34951"/>
            <exon e_start="34853" e_stop="34697"/>
            <exon e_start="34171" e_stop="34008"/>
            <exon e_start="33903" e_stop="33817"/>
            <exon e_start="31679" e_stop="31351"/>
            <exon e_start="31003" e_stop="30946"/>
            <exon e_start="30677" e_stop="30617"/>
            <exon e_start="30372" e_stop="30099"/>
            <exon e_start="29882" e_stop="29342"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.980" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.937" e_score="1.000"/>
          <exon-intron don_prob="0.886" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.899" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.942" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.831" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.820" acc_prob="0.988" e_score="0.994"/>
          <exon-intron don_prob="0.886" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.939" acc_prob="0.914" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.258" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.978" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="42143" e_stop="41976" e_length="168"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.998">
            <gDNA_intron_boundary i_start="41975" i_stop="41804" i_length="172"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="41803" e_stop="41458" e_length="346"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="41457" i_stop="40063" i_length="1395"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="40062" e_stop="39817" e_length="246"/>
          </exon>
          <intron i_serial="3" don_prob="0.980" acc_prob="0.993">
            <gDNA_intron_boundary i_start="39816" i_stop="38999" i_length="818"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="38998" e_stop="38808" e_length="191"/>
          </exon>
          <intron i_serial="4" don_prob="0.988" acc_prob="0.989">
            <gDNA_intron_boundary i_start="38807" i_stop="38726" i_length="82"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="38725" e_stop="38554" e_length="172"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.937">
            <gDNA_intron_boundary i_start="38553" i_stop="36775" i_length="1779"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="36774" e_stop="36637" e_length="138"/>
          </exon>
          <intron i_serial="6" don_prob="0.886" acc_prob="0.988">
            <gDNA_intron_boundary i_start="36636" i_stop="36558" i_length="79"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="36557" e_stop="36380" e_length="178"/>
          </exon>
          <intron i_serial="7" don_prob="0.995" acc_prob="0.974">
            <gDNA_intron_boundary i_start="36379" i_stop="36240" i_length="140"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="36239" e_stop="36094" e_length="146"/>
          </exon>
          <intron i_serial="8" don_prob="0.899" acc_prob="0.979">
            <gDNA_intron_boundary i_start="36093" i_stop="35885" i_length="209"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="35884" e_stop="35708" e_length="177"/>
          </exon>
          <intron i_serial="9" don_prob="0.942" acc_prob="0.999">
            <gDNA_intron_boundary i_start="35707" i_stop="35608" i_length="100"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="35607" e_stop="35497" e_length="111"/>
          </exon>
          <intron i_serial="10" don_prob="0.962" acc_prob="0.995">
            <gDNA_intron_boundary i_start="35496" i_stop="35071" i_length="426"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="35070" e_stop="34951" e_length="120"/>
          </exon>
          <intron i_serial="11" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="34950" i_stop="34854" i_length="97"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="34853" e_stop="34697" e_length="157"/>
          </exon>
          <intron i_serial="12" don_prob="0.831" acc_prob="0.983">
            <gDNA_intron_boundary i_start="34696" i_stop="34172" i_length="525"/>
          </intron>
          <exon e_serial="13" e_score="0.994">
            <gDNA_exon_boundary e_start="34171" e_stop="34008" e_length="164"/>
          </exon>
          <intron i_serial="13" don_prob="0.820" acc_prob="0.988">
            <gDNA_intron_boundary i_start="34007" i_stop="33904" i_length="104"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="33903" e_stop="33817" e_length="87"/>
          </exon>
          <intron i_serial="14" don_prob="0.886" acc_prob="0.978">
            <gDNA_intron_boundary i_start="33816" i_stop="31680" i_length="2137"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="31679" e_stop="31351" e_length="329"/>
          </exon>
          <intron i_serial="15" don_prob="0.939" acc_prob="0.914">
            <gDNA_intron_boundary i_start="31350" i_stop="31004" i_length="347"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="31003" e_stop="30946" e_length="58"/>
          </exon>
          <intron i_serial="16" don_prob="0.976" acc_prob="0.258">
            <gDNA_intron_boundary i_start="30945" i_stop="30678" i_length="268"/>
          </intron>
          <exon e_serial="17" e_score="1.000">
            <gDNA_exon_boundary e_start="30677" e_stop="30617" e_length="61"/>
          </exon>
          <intron i_serial="17" don_prob="0.999" acc_prob="0.978">
            <gDNA_intron_boundary i_start="30616" i_stop="30373" i_length="244"/>
          </intron>
          <exon e_serial="18" e_score="1.000">
            <gDNA_exon_boundary e_start="30372" e_stop="30099" e_length="274"/>
          </exon>
          <intron i_serial="18" don_prob="0.957" acc_prob="0.978">
            <gDNA_intron_boundary i_start="30098" i_stop="29883" i_length="216"/>
          </intron>
          <exon e_serial="19" e_score="1.000">
            <gDNA_exon_boundary e_start="29882" e_stop="29342" e_length="541"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42143" stop="41976"/>
              <exon start="41803" stop="41458"/>
              <exon start="40062" stop="39817"/>
              <exon start="38998" stop="38808"/>
              <exon start="38725" stop="38554"/>
              <exon start="36774" stop="36637"/>
              <exon start="36557" stop="36380"/>
              <exon start="36239" stop="36094"/>
              <exon start="35884" stop="35708"/>
              <exon start="35607" stop="35497"/>
              <exon start="35070" stop="34951"/>
              <exon start="34853" stop="34697"/>
              <exon start="34171" stop="34008"/>
              <exon start="33903" stop="33817"/>
              <exon start="31679" stop="31351"/>
              <exon start="31003" stop="30946"/>
              <exon start="30677" stop="30617"/>
              <exon start="30372" stop="30099"/>
              <exon start="29882" stop="29370"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746474" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42131" stop="41976"/>
              <exon start="41803" stop="41458"/>
              <exon start="40062" stop="39817"/>
              <exon start="38998" stop="38900"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737152" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35872" stop="35708"/>
              <exon start="35607" stop="35497"/>
              <exon start="35070" stop="34951"/>
              <exon start="34853" stop="34697"/>
              <exon start="34171" stop="34008"/>
              <exon start="33903" stop="33828"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E735727" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29725" stop="29342"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355484" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29725" stop="29342"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29725" stop="29342"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E356718" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATACACTGAGACGTCTCACTACGCCTTTCCTAAAATTGGGATTCATTCCCTTTTCTGGAAAGGCACACACTTATCTTTACTTTCTTGATTCTTGATTCTTGTCGCCTTCAACCAAAGATTTGTCAAAATTCCTATTATCATTGCAACAACCATAGATCTCCAATCAG : GTGGGTTATTGAACCGATCAAGATGAAGTGGATGGGCGGTAGCGTGAGCCAAAACATGCAAGGCTGCAGAGCGAAATTTAGAGTGATTGCATTGGTTCTACTTGCTATATCTATAGGTTTAGCTGGTCTTTATAGCATGCTAAAACCCATATCTAATGGATGTACCATGACATACATGTATCCTACTTATATCCCTGTACCTACACCGAAAAATCTGTCGTCCATGAAGTATGGATTACATCTATACCATGAAGGATGGAGAAAGATTAATTTCAGCGATCATCTTAAGACACTTAGTGGAGTTCCTGTTCTTTTTATCCCTGGCAATGGTGGAAGCTACAAACAG : GTGAGATCTGTGGCTGCAGAATCTGATAGAGCTTATCAAGGAGGTCCTCTTGAGCACAGCTTTTACCAAGAAGCCTCTCTAACTCTCGGAGAGGGAGTAGATTTTGATGTCACCAGCACTCCTTTACCCTATCAATACACATCCATGCTTGACTGGTTTGCTGTGGATCTTGAAGGTGAACATTCTGCAATGGATGGTCGAATTCTTGAAGAACACACAGATTATGTTGTATATGCCATTCACAGG : ATATTGGATCATTATAAAGAGTCCCACGATGCACGAGTTAAGGAAGGTGCTGCTGTGTCTAGGAGTCCTCCGAGAAGTGTGATATTGGTTGGTCATTCCATGGGTGGTTTTGTTGCTAGAGCTGCGATTGTCCACCCAGATTTAAGGAAATCTGCTGTTGAAACTGTTCTGACACTTTCGTCTCCACACCA : GTCGCCTCCTCTGGCTCTGCAGCCATCACTTGGTCAGTATTATGCACGAGTAAATCACGAATGGAGGAAAGGATACGAGGTCCAAACTTCTCGTTCAGGGCATCATCTGTCTGATCCACTACTCTCTCATGTTGTTGTTGTCTCCATTTCTGGTGGTTATCATGATTACCAG : GTCCGATCAAATTTACAATCACTTGATGGTATTGTGCCTCCTACCCATGGCTTTATGATTAGTAGCACAAGCATGAAAAATGTGTGGTTGTCAATGGAGCACCAGGTTATCTTGTGGTGTAATCAGCTTGTTGTCCAA : GTATCACATACTCTTCTTAGTCTGGTAGACCAGGGGACTGGACAACCTATATCTGATGTTCGAAAAAGGCTGGCAATCTTCACAAAAATGCTTCATAGTGGGATACCTCCAAATTTTAATTGGTTAAAGCAGTCACAGCTGCCTCATATACCAATTGAAGATGGAGAAGCTAAATCTG : GATCTCAAGCACATAGAGTGTATTCTTGCCCTAATAACATCCATTGGAGTGATGATGCACTTGAAAGAGATTTATACATCGAGACAACCACAGTTACAGTTTTAGCGATGGACGGGAGAAGGCGGTGGTTGGACATTGAGAAGTTG : GGGTCTAACGGCAAAAACCATTTTGTTTTTGTCACAAATCTTTCTCCATGTTCCGGTGTACGACTGCACCTTTGGCCTGAGAAAGGAACTGAAGTTTCCACTTTACCGATCAATAAACGGGTTTTAGAAGTTACATCAAAGATGGTGCAAATTCCATCTGGACCAGCTCCGAGGCAG : GTTGAACCAGGTACTCAGACTGAGCAGGCACCTCCCTCTGCTGTATTTTGGTTGCACCCAGAGGATATGCGTGGTTTCAGATATCTGACCATCTCAGTGGCACCTCGCATG : GCTGTTTCAGGAAGACCTCCACCAGCCACTTCCATGGGAGTTGGGCAATTTTTTAAACCAGCAGACGGAGAAACAGCCTTATCTTCTGGGTCGTTGATTCGGTCTATGTTTTCTTTACAG : GAGATGACGTTGAATGAGGATCATCCTCTTGCACTCAATCTGTCTTTCTCTGTTAGCTTGGGTCTCATGCCTGTGACGTTATCTGTCAAAACAACTGGTTGTGGAATAAGAAAGTCAGAGTTCACTGCTGATGAAACTGGAGAGATGGAAATTGACA : GGCTGTGTAAACTTCGCTGTTTCCCTCCTGTAGCAATTGCTTGGGATTTCACGTCTGGTCTTCATATTTTTCCTAATCTGTTCTCAGAAACAATTCTTGTGGATTCCTCTCCAGCACTCTGGACTTCCAGCCTAGGGTCAGAAAAGACCAACGTTATATTGCTG : ATTGATCCACATTGTTCGTACAAAACAAGTATTGGTGTTAATGTAACCTCTGCAGCTAAAAGATTTTCGCTTTTATATTTCCCACAG : ATTACTGGTTTTGCAATTGCTGTTGTCTTTTTTGCTTTAATGCGGCAAGCACGACAATGGGAGCTTGACCTGCCTATACCTTCACTCCTTACAGCAGTTGAATCAAATTTGCGGATGCCATTGCCCTTTCTATGTTTGGCCCTGCTACCTATCTTATTTGCTCTTGTACTTTCCTGCCTCATTTCTCTACCTCTTCCTCCAGCCATAAGTTTCATCTCTGTCTCAACAATCTGTTACTTATGTGCAAATGGAGTGGTGGCTGTGCTGATATCAGCCTCCCAGTTGTTGTTCTACGTTAGTGCATCTTTACATGTATTCATCAAGAAACG : GTCGCAAACACGGGAACATAACTTTTCTCCTCTTTTCACTGCCTTCCTGTCATCCAAG : CATTGGGTCTTCTTTTGCTGGTCATTTCTCATGCTGTGTGCTCCCACAATTCCCTGTCCAG : TTTTTTGATGGCTTCATTTCACAGCCGTACCCAGACTAAGGAGTTCATAGAATCTGGGAACAGACGTCAGAGTGGATCGAAGCAGTCCATACCCGAGCATGATGGTGAAATCAACACGCATGTTCCTCAGAAGGAGAGTAATTCCAGTAGTCTGGACTCAGTAAAAAGCTATGGTGACACCCAATTAGAGATCTTCAATCATCGGCATGGCTTGCTTGTATTACACTTGCTTGCAATGCTGATGTTTGTCCCTTCATTTATTGCGTGGATCCAG : AGAATGGGGATCGGTCATAGCTTGCCGTGGTTCTTGGATTCTATACTTTGCATAGGTGTTTTGCTGCATGGTGTATGTGACTCAAAGCCAGAGTTCAACTTCTTCTTCTTCTTTCCTTTTCCGGTCATCCAAAGATTGGAGATAAACCTGAGCTTTGGCTATCTTCTTGCTGGATACTTTTCCTATATTTGTGGCTTAGCCTTGGCTCCTTACATAACATTTTATCCCATGGCCGCCATTGGGTTTATATCATGTGCTTTTAGGATCATAGAGAAGAGAAGTAGGGAAAAGGGGGAAATGTACCATCACCGTAGGAAACACTCTCATAAACACTAAAGTGAAAATACTCCCACTATACGATAGTGCCACATTCAGAATGGTTCTGCAATAGATGTTCTAGTTGACATGCCTCAATTTGTTTGATGTGTAATTTTCATTTTCAGAGGAGTAGAATATCAGCTTGTGTATGGCTTTAATTCTACAAGTGATTCAATCATTATATTTGTCGCAAAAATTTGTTTATGGTCTTTCAACTTAAACC</gDNA_template>
            <first_frame> Y  T  L  R  R  L  T  T  P  F  L  K  L  G  F  I  P  F  S  G  K  A  H  T  Y  L  Y  F  L  D  S  *  F  L  S  P  S  T  K  D  L  S  K  F  L  L  S  L  Q  Q  P  *  I  S  N  Q  :  V  G  Y  *  T  D  Q  D  E  V  D  G  R  *  R  E  P  K  H  A  R  L  Q  S  E  I  *  S  D  C  I  G  S  T  C  Y  I  Y  R  F  S  W  S  L  *  H  A  K  T  H  I  *  W  M  Y  H  D  I  H  V  S  Y  L  Y  P  C  T  Y  T  E  K  S  V  V  H  E  V  W  I  T  S  I  P  *  R  M  E  K  D  *  F  Q  R  S  S  *  D  T  *  W  S  S  C  S  F  Y  P  W  Q  W  W  K  L  Q  T   : G  E  I  C  G  C  R  I  *  *  S  L  S  R  R  S  S  *  A  Q  L  L  P  R  S  L  S  N  S  R  R  G  S  R  F  *  C  H  Q  H  S  F  T  L  S  I  H  I  H  A  *  L  V  C  C  G  S  *  R  *  T  F  C  N  G  W  S  N  S  *  R  T  H  R  L  C  C  I  C  H  S  Q   : D  I  G  S  L  *  R  V  P  R  C  T  S  *  G  R  C  C  C  V  *  E  S  S  E  K  C  D  I  G  W  S  F  H  G  W  F  C  C  *  S  C  D  C  P  P  R  F  K  E  I  C  C  *  N  C  S  D  T  F  V  S  T  P  :  V  A  S  S  G  S  A  A  I  T  W  S  V  L  C  T  S  K  S  R  M  E  E  R  I  R  G  P  N  F  S  F  R  A  S  S  V  *  S  T  T  L  S  C  C  C  C  L  H  F  W  W  L  S  *  L  P   : G  P  I  K  F  T  I  T  *  W  Y  C  A  S  Y  P  W  L  Y  D  *  *  H  K  H  E  K  C  V  V  V  N  G  A  P  G  Y  L  V  V  *  S  A  C  C  P   : S  I  T  Y  S  S  *  S  G  R  P  G  D  W  T  T  Y  I  *  C  S  K  K  A  G  N  L  H  K  N  A  S  *  W  D  T  S  K  F  *  L  V  K  A  V  T  A  A  S  Y  T  N  *  R  W  R  S  *  I  W :   I  S  S  T  *  S  V  F  L  P  *  *  H  P  L  E  *  *  C  T  *  K  R  F  I  H  R  D  N  H  S  Y  S  F  S  D  G  R  E  K  A  V  V  G  H  *  E  V   : G  V  *  R  Q  K  P  F  C  F  C  H  K  S  F  S  M  F  R  C  T  T  A  P  L  A  *  E  R  N  *  S  F  H  F  T  D  Q  *  T  G  F  R  S  Y  I  K  D  G  A  N  S  I  W  T  S  S  E  A   : G  *  T  R  Y  S  D  *  A  G  T  S  L  C  C  I  L  V  A  P  R  G  Y  A  W  F  Q  I  S  D  H  L  S  G  T  S  H   : G  C  F  R  K  T  S  T  S  H  F  H  G  S  W  A  I  F  *  T  S  R  R  R  N  S  L  I  F  W  V  V  D  S  V  Y  V  F  F  T   : G  D  D  V  E  *  G  S  S  S  C  T  Q  S  V  F  L  C  *  L  G  S  H  A  C  D  V  I  C  Q  N  N  W  L  W  N  K  K  V  R  V  H  C  *  *  N  W  R  D  G  N  *  Q :   A  V  *  T  S  L  F  P  S  C  S  N  C  L  G  F  H  V  W  S  S  Y  F  S  *  S  V  L  R  N  N  S  C  G  F  L  S  S  T  L  D  F  Q  P  R  V  R  K  D  Q  R  Y  I  A   : D  *  S  T  L  F  V  Q  N  K  Y  W  C  *  C  N  L  C  S  *  K  I  F  A  F  I  F  P  T   : D  Y  W  F  C  N  C  C  C  L  F  C  F  N  A  A  S  T  T  M  G  A  *  P  A  Y  T  F  T  P  Y  S  S  *  I  K  F  A  D  A  I  A  L  S  M  F  G  P  A  T  Y  L  I  C  S  C  T  F  L  P  H  F  S  T  S  S  S  S  H  K  F  H  L  C  L  N  N  L  L  L  M  C  K  W  S  G  G  C  A  D  I  S  L  P  V  V  V  L  R  *  C  I  F  T  C  I  H  Q  E  T  :  V  A  N  T  G  T  *  L  F  S  S  F  H  C  L  P  V  I  Q   : A  L  G  L  L  L  L  V  I  S  H  A  V  C  S  H  N  S  L  S  S :   F  L  M  A  S  F  H  S  R  T  Q  T  K  E  F  I  E  S  G  N  R  R  Q  S  G  S  K  Q  S  I  P  E  H  D  G  E  I  N  T  H  V  P  Q  K  E  S  N  S  S  S  L  D  S  V  K  S  Y  G  D  T  Q  L  E  I  F  N  H  R  H  G  L  L  V  L  H  L  L  A  M  L  M  F  V  P  S  F  I  A  W  I  Q  :  R  M  G  I  G  H  S  L  P  W  F  L  D  S  I  L  C  I  G  V  L  L  H  G  V  C  D  S  K  P  E  F  N  F  F  F  F  F  P  F  P  V  I  Q  R  L  E  I  N  L  S  F  G  Y  L  L  A  G  Y  F  S  Y  I  C  G  L  A  L  A  P  Y  I  T  F  Y  P  M  A  A  I  G  F  I  S  C  A  F  R  I  I  E  K  R  S  R  E  K  G  E  M  Y  H  H  R  R  K  H  S  H  K  H  *  S  E  N  T  P  T  I  R  *  C  H  I  Q  N  G  S  A  I  D  V  L  V  D  M  P  Q  F  V  *  C  V  I  F  I  F  R  G  V  E  Y  Q  L  V  Y  G  F  N  S  T  S  D  S  I  I  I  F  V  A  K  I  C  L  W  S  F  N  L  N  </first_frame>
            <second_frame>  I  H  *  D  V  S  L  R  L  S  *  N  W  D  S  F  P  F  L  E  R  H  T  L  I  F  T  F  L  I  L  D  S  C  R  L  Q  P  K  I  C  Q  N  S  Y  Y  H  C  N  N  H  R  S  P  I  R :   W  V  I  E  P  I  K  M  K  W  M  G  G  S  V  S  Q  N  M  Q  G  C  R  A  K  F  R  V  I  A  L  V  L  L  A  I  S  I  G  L  A  G  L  Y  S  M  L  K  P  I  S  N  G  C  T  M  T  Y  M  Y  P  T  Y  I  P  V  P  T  P  K  N  L  S  S  M  K  Y  G  L  H  L  Y  H  E  G  W  R  K  I  N  F  S  D  H  L  K  T  L  S  G  V  P  V  L  F  I  P  G  N  G  G  S  Y  K  Q  :  V  R  S  V  A  A  E  S  D  R  A  Y  Q  G  G  P  L  E  H  S  F  Y  Q  E  A  S  L  T  L  G  E  G  V  D  F  D  V  T  S  T  P  L  P  Y  Q  Y  T  S  M  L  D  W  F  A  V  D  L  E  G  E  H  S  A  M  D  G  R  I  L  E  E  H  T  D  Y  V  V  Y  A  I  H  R  :  I  L  D  H  Y  K  E  S  H  D  A  R  V  K  E  G  A  A  V  S  R  S  P  P  R  S  V  I  L  V  G  H  S  M  G  G  F  V  A  R  A  A  I  V  H  P  D  L  R  K  S  A  V  E  T  V  L  T  L  S  S  P  H  Q :   S  P  P  L  A  L  Q  P  S  L  G  Q  Y  Y  A  R  V  N  H  E  W  R  K  G  Y  E  V  Q  T  S  R  S  G  H  H  L  S  D  P  L  L  S  H  V  V  V  V  S  I  S  G  G  Y  H  D  Y  Q  :  V  R  S  N  L  Q  S  L  D  G  I  V  P  P  T  H  G  F  M  I  S  S  T  S  M  K  N  V  W  L  S  M  E  H  Q  V  I  L  W  C  N  Q  L  V  V  Q  :  V  S  H  T  L  L  S  L  V  D  Q  G  T  G  Q  P  I  S  D  V  R  K  R  L  A  I  F  T  K  M  L  H  S  G  I  P  P  N  F  N  W  L  K  Q  S  Q  L  P  H  I  P  I  E  D  G  E  A  K  S   : G  S  Q  A  H  R  V  Y  S  C  P  N  N  I  H  W  S  D  D  A  L  E  R  D  L  Y  I  E  T  T  T  V  T  V  L  A  M  D  G  R  R  R  W  L  D  I  E  K  L  :  G  S  N  G  K  N  H  F  V  F  V  T  N  L  S  P  C  S  G  V  R  L  H  L  W  P  E  K  G  T  E  V  S  T  L  P  I  N  K  R  V  L  E  V  T  S  K  M  V  Q  I  P  S  G  P  A  P  R  Q  :  V  E  P  G  T  Q  T  E  Q  A  P  P  S  A  V  F  W  L  H  P  E  D  M  R  G  F  R  Y  L  T  I  S  V  A  P  R  M  :  A  V  S  G  R  P  P  P  A  T  S  M  G  V  G  Q  F  F  K  P  A  D  G  E  T  A  L  S  S  G  S  L  I  R  S  M  F  S  L  Q  :  E  M  T  L  N  E  D  H  P  L  A  L  N  L  S  F  S  V  S  L  G  L  M  P  V  T  L  S  V  K  T  T  G  C  G  I  R  K  S  E  F  T  A  D  E  T  G  E  M  E  I  D   : R  L  C  K  L  R  C  F  P  P  V  A  I  A  W  D  F  T  S  G  L  H  I  F  P  N  L  F  S  E  T  I  L  V  D  S  S  P  A  L  W  T  S  S  L  G  S  E  K  T  N  V  I  L  L  :  I  D  P  H  C  S  Y  K  T  S  I  G  V  N  V  T  S  A  A  K  R  F  S  L  L  Y  F  P  Q  :  I  T  G  F  A  I  A  V  V  F  F  A  L  M  R  Q  A  R  Q  W  E  L  D  L  P  I  P  S  L  L  T  A  V  E  S  N  L  R  M  P  L  P  F  L  C  L  A  L  L  P  I  L  F  A  L  V  L  S  C  L  I  S  L  P  L  P  P  A  I  S  F  I  S  V  S  T  I  C  Y  L  C  A  N  G  V  V  A  V  L  I  S  A  S  Q  L  L  F  Y  V  S  A  S  L  H  V  F  I  K  K  R :   S  Q  T  R  E  H  N  F  S  P  L  F  T  A  F  L  S  S  K  :  H  W  V  F  F  C  W  S  F  L  M  L  C  A  P  T  I  P  C  P   : V  F  *  W  L  H  F  T  A  V  P  R  L  R  S  S  *  N  L  G  T  D  V  R  V  D  R  S  S  P  Y  P  S  M  M  V  K  S  T  R  M  F  L  R  R  R  V  I  P  V  V  W  T  Q  *  K  A  M  V  T  P  N  *  R  S  S  I  I  G  M  A  C  L  Y  Y  T  C  L  Q  C  *  C  L  S  L  H  L  L  R  G  S  R :   E  W  G  S  V  I  A  C  R  G  S  W  I  L  Y  F  A  *  V  F  C  C  M  V  Y  V  T  Q  S  Q  S  S  T  S  S  S  S  F  L  F  R  S  S  K  D  W  R  *  T  *  A  L  A  I  F  L  L  D  T  F  P  I  F  V  A  *  P  W  L  L  T  *  H  F  I  P  W  P  P  L  G  L  Y  H  V  L  L  G  S  *  R  R  E  V  G  K  R  G  K  C  T  I  T  V  G  N  T  L  I  N  T  K  V  K  I  L  P  L  Y  D  S  A  T  F  R  M  V  L  Q  *  M  F  *  L  T  C  L  N  L  F  D  V  *  F  S  F  S  E  E  *  N  I  S  L  C  M  A  L  I  L  Q  V  I  Q  S  L  Y  L  S  Q  K  F  V  Y  G  L  S  T  *  T </second_frame>
            <third_frame>   Y  T  E  T  S  H  Y  A  F  P  K  I  G  I  H  S  L  F  W  K  G  T  H  L  S  L  L  S  *  F  L  I  L  V  A  F  N  Q  R  F  V  K  I  P  I  I  I  A  T  T  I  D  L  Q  S   : G  G  L  L  N  R  S  R  *  S  G  W  A  V  A  *  A  K  T  C  K  A  A  E  R  N  L  E  *  L  H  W  F  Y  L  L  Y  L  *  V  *  L  V  F  I  A  C  *  N  P  Y  L  M  D  V  P  *  H  T  C  I  L  L  I  S  L  Y  L  H  R  K  I  C  R  P  *  S  M  D  Y  I  Y  T  M  K  D  G  E  R  L  I  S  A  I  I  L  R  H  L  V  E  F  L  F  F  L  S  L  A  M  V  E  A  T  N  R :   *  D  L  W  L  Q  N  L  I  E  L  I  K  E  V  L  L  S  T  A  F  T  K  K  P  L  *  L  S  E  R  E  *  I  L  M  S  P  A  L  L  Y  P  I  N  T  H  P  C  L  T  G  L  L  W  I  L  K  V  N  I  L  Q  W  M  V  E  F  L  K  N  T  Q  I  M  L  Y  M  P  F  T  G :   Y  W  I  I  I  K  S  P  T  M  H  E  L  R  K  V  L  L  C  L  G  V  L  R  E  V  *  Y  W  L  V  I  P  W  V  V  L  L  L  E  L  R  L  S  T  Q  I  *  G  N  L  L  L  K  L  F  *  H  F  R  L  H  T   : S  R  L  L  W  L  C  S  H  H  L  V  S  I  M  H  E  *  I  T  N  G  G  K  D  T  R  S  K  L  L  V  Q  G  I  I  C  L  I  H  Y  S  L  M  L  L  L  S  P  F  L  V  V  I  M  I  T  R :   S  D  Q  I  Y  N  H  L  M  V  L  C  L  L  P  M  A  L  *  L  V  A  Q  A  *  K  M  C  G  C  Q  W  S  T  R  L  S  C  G  V  I  S  L  L  S  K :   Y  H  I  L  F  L  V  W  *  T  R  G  L  D  N  L  Y  L  M  F  E  K  G  W  Q  S  S  Q  K  C  F  I  V  G  Y  L  Q  I  L  I  G  *  S  S  H  S  C  L  I  Y  Q  L  K  M  E  K  L  N  L  :  D  L  K  H  I  E  C  I  L  A  L  I  T  S  I  G  V  M  M  H  L  K  E  I  Y  T  S  R  Q  P  Q  L  Q  F  *  R  W  T  G  E  G  G  G  W  T  L  R  S  W :   G  L  T  A  K  T  I  L  F  L  S  Q  I  F  L  H  V  P  V  Y  D  C  T  F  G  L  R  K  E  L  K  F  P  L  Y  R  S  I  N  G  F  *  K  L  H  Q  R  W  C  K  F  H  L  D  Q  L  R  G  R :   L  N  Q  V  L  R  L  S  R  H  L  P  L  L  Y  F  G  C  T  Q  R  I  C  V  V  S  D  I  *  P  S  Q  W  H  L  A  W :   L  F  Q  E  D  L  H  Q  P  L  P  W  E  L  G  N  F  L  N  Q  Q  T  E  K  Q  P  Y  L  L  G  R  *  F  G  L  C  F  L  Y  R :   R  *  R  *  M  R  I  I  L  L  H  S  I  C  L  S  L  L  A  W  V  S  C  L  *  R  Y  L  S  K  Q  L  V  V  E  *  E  S  Q  S  S  L  L  M  K  L  E  R  W  K  L  T  :  G  C  V  N  F  A  V  S  L  L  *  Q  L  L  G  I  S  R  L  V  F  I  F  F  L  I  C  S  Q  K  Q  F  L  W  I  P  L  Q  H  S  G  L  P  A  *  G  Q  K  R  P  T  L  Y  C  * :   L  I  H  I  V  R  T  K  Q  V  L  V  L  M  *  P  L  Q  L  K  D  F  R  F  Y  I  S  H  R :   L  L  V  L  Q  L  L  L  S  F  L  L  *  C  G  K  H  D  N  G  S  L  T  C  L  Y  L  H  S  L  Q  Q  L  N  Q  I  C  G  C  H  C  P  F  Y  V  W  P  C  Y  L  S  Y  L  L  L  Y  F  P  A  S  F  L  Y  L  F  L  Q  P  *  V  S  S  L  S  Q  Q  S  V  T  Y  V  Q  M  E  W  W  L  C  *  Y  Q  P  P  S  C  C  S  T  L  V  H  L  Y  M  Y  S  S  R  N   : G  R  K  H  G  N  I  T  F  L  L  F  S  L  P  S  C  H  P  S :   I  G  S  S  F  A  G  H  F  S  C  C  V  L  P  Q  F  P  V  Q  :  F  F  D  G  F  I  S  Q  P  Y  P  D  *  G  V  H  R  I  W  E  Q  T  S  E  W  I  E  A  V  H  T  R  A  *  W  *  N  Q  H  A  C  S  S  E  G  E  *  F  Q  *  S  G  L  S  K  K  L  W  *  H  P  I  R  D  L  Q  S  S  A  W  L  A  C  I  T  L  A  C  N  A  D  V  C  P  F  I  Y  C  V  D  P   : E  N  G  D  R  S  *  L  A  V  V  L  G  F  Y  T  L  H  R  C  F  A  A  W  C  M  *  L  K  A  R  V  Q  L  L  L  L  L  S  F  S  G  H  P  K  I  G  D  K  P  E  L  W  L  S  S  C  W  I  L  F  L  Y  L  W  L  S  L  G  S  L  H  N  I  L  S  H  G  R  H  W  V  Y  I  M  C  F  *  D  H  R  E  E  K  *  G  K  G  G  N  V  P  S  P  *  E  T  L  S  *  T  L  K  *  K  Y  S  H  Y  T  I  V  P  H  S  E  W  F  C  N  R  C  S  S  *  H  A  S  I  C  L  M  C  N  F  H  F  Q  R  S  R  I  S  A  C  V  W  L  *  F  Y  K  *  F  N  H  Y  I  C  R  K  N  L  F  M  V  F  Q  L  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42109" stop="41976"/>
                    <exon start="41803" stop="41458"/>
                    <exon start="40062" stop="39817"/>
                    <exon start="38998" stop="38808"/>
                    <exon start="38725" stop="38554"/>
                    <exon start="36774" stop="36637"/>
                    <exon start="36557" stop="36380"/>
                    <exon start="36239" stop="36094"/>
                    <exon start="35884" stop="35708"/>
                    <exon start="35607" stop="35497"/>
                    <exon start="35070" stop="34951"/>
                    <exon start="34853" stop="34697"/>
                    <exon start="34171" stop="34008"/>
                    <exon start="33903" stop="33817"/>
                    <exon start="31679" stop="31351"/>
                    <exon start="31003" stop="30946"/>
                    <exon start="30677" stop="30617"/>
                    <exon start="30372" stop="30365"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>2820</number_coding_nucleotides>
                  <number_encoded_amino_acids>940</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NWDSFPFLERHTLIFTFLILDSCRLQPKICQNSYYHCNNHRSPIRWVIEPIKMKWMGGSVSQNMQGCRAKFRVIALVLLAISIGLAGLYSMLKPISNGCTMTYMYPTYIPVPTPKNLSSMKYGLHLYHEGWRKINFSDHLKTLSGVPVLFIPGNGGSYKQVRSVAAESDRAYQGGPLEHSFYQEASLTLGEGVDFDVTSTPLPYQYTSMLDWFAVDLEGEHSAMDGRILEEHTDYVVYAIHRILDHYKESHDARVKEGAAVSRSPPRSVILVGHSMGGFVARAAIVHPDLRKSAVETVLTLSSPHQSPPLALQPSLGQYYARVNHEWRKGYEVQTSRSGHHLSDPLLSHVVVVSISGGYHDYQVRSNLQSLDGIVPPTHGFMISSTSMKNVWLSMEHQVILWCNQLVVQVSHTLLSLVDQGTGQPISDVRKRLAIFTKMLHSGIPPNFNWLKQSQLPHIPIEDGEAKSGSQAHRVYSCPNNIHWSDDALERDLYIETTTVTVLAMDGRRRWLDIEKLGSNGKNHFVFVTNLSPCSGVRLHLWPEKGTEVSTLPINKRVLEVTSKMVQIPSGPAPRQVEPGTQTEQAPPSAVFWLHPEDMRGFRYLTISVAPRMAVSGRPPPATSMGVGQFFKPADGETALSSGSLIRSMFSLQEMTLNEDHPLALNLSFSVSLGLMPVTLSVKTTGCGIRKSEFTADETGEMEIDRLCKLRCFPPVAIAWDFTSGLHIFPNLFSETILVDSSPALWTSSLGSEKTNVILLIDPHCSYKTSIGVNVTSAAKRFSLLYFPQITGFAIAVVFFALMRQARQWELDLPIPSLLTAVESNLRMPLPFLCLALLPILFALVLSCLISLPLPPAISFISVSTICYLCANGVVAVLISASQLLFYVSASLHVFIKKRSQTREHNFSPLFTAFLSSKHWVFFCWSFLMLCAPTIPCPVF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="31557" e_stop="31351"/>
            <exon e_start="31003" e_stop="30946"/>
            <exon e_start="30756" e_stop="30617"/>
            <exon e_start="30372" e_stop="30103"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.939" acc_prob="0.914" e_score="0.966"/>
          <exon-intron don_prob="0.976" acc_prob="0.993" e_score="0.983"/>
          <exon-intron don_prob="0.999" acc_prob="0.978" e_score="0.964"/>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="31557" e_stop="31351" e_length="207"/>
          </exon>
          <intron i_serial="1" don_prob="0.939" acc_prob="0.914">
            <gDNA_intron_boundary i_start="31350" i_stop="31004" i_length="347"/>
          </intron>
          <exon e_serial="2" e_score="0.983">
            <gDNA_exon_boundary e_start="31003" e_stop="30946" e_length="58"/>
          </exon>
          <intron i_serial="2" don_prob="0.976" acc_prob="0.993">
            <gDNA_intron_boundary i_start="30945" i_stop="30757" i_length="189"/>
          </intron>
          <exon e_serial="3" e_score="0.964">
            <gDNA_exon_boundary e_start="30756" e_stop="30617" e_length="140"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.978">
            <gDNA_intron_boundary i_start="30616" i_stop="30373" i_length="244"/>
          </intron>
          <exon e_serial="4" e_score="0.970">
            <gDNA_exon_boundary e_start="30372" e_stop="30103" e_length="270"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31557" stop="31351"/>
              <exon start="31003" stop="30946"/>
              <exon start="30756" stop="30617"/>
              <exon start="30372" stop="30103"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E435793" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31557" stop="31351"/>
              <exon start="31003" stop="30946"/>
              <exon start="30756" stop="30617"/>
              <exon start="30372" stop="30131"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459260" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCCCTTTCTATGTTTGGCCCTGCTACCTATCTTATTTGCTCTTGTACTTTCCTGCCTCATTTCTCTACCTCTTCCTCCAGCCATAAGTTTCATCTCTGTCTCAACAATCTGTTACTTATGTGCAAATGGAGTGGTGGCTGTGCTGATATCAGCCTCCCAGTTGTTGTTCTACGTTAGTGCATCTTTACATGTATTCATCAAGAAACG : GTCGCAAACACGGGAACATAACTTTTCTCCTCTTTTCACTGCCTTCCTGTCATCCAAG : GTAGTCAGGATCGTGAGATTCAATCCATTGTTTGATATGACACTTGTCTCTTTGACCCTAATGTGCTTCGCTCATCCAGCATTGGGTCTTCTTTTGCTGGTCATTTCTCATGCTGTGTGCTCCCACAATTCCCTGTCCAG : TTTTTTGATGGCTTCATTTCACAGCCGTACCCAGACTAAGGAGTTCATAGAATCTGGGAACAGACGTCAGAGTGGATCGAAGCAGTCCATACCCGAGCATGATGGTGAAATCAACACGCATGTTCCTCAGAAGGAGAGTAATTCCAGTAGTCTGGACTCAGTAAAAAGCTATGGTGACACCCAATTAGAGATCTTCAATCATCGGCATGGCTTGCTTGTATTACACTTGCTTGCAATGCTGATGTTTGTCCCTTCATTTATTGCGTGGAT</gDNA_template>
            <first_frame> A  L  S  M  F  G  P  A  T  Y  L  I  C  S  C  T  F  L  P  H  F  S  T  S  S  S  S  H  K  F  H  L  C  L  N  N  L  L  L  M  C  K  W  S  G  G  C  A  D  I  S  L  P  V  V  V  L  R  *  C  I  F  T  C  I  H  Q  E  T  :  V  A  N  T  G  T  *  L  F  S  S  F  H  C  L  P  V  I  Q   : G  S  Q  D  R  E  I  Q  S  I  V  *  Y  D  T  C  L  F  D  P  N  V  L  R  S  S  S  I  G  S  S  F  A  G  H  F  S  C  C  V  L  P  Q  F  P  V  Q  :  F  F  D  G  F  I  S  Q  P  Y  P  D  *  G  V  H  R  I  W  E  Q  T  S  E  W  I  E  A  V  H  T  R  A  *  W  *  N  Q  H  A  C  S  S  E  G  E  *  F  Q  *  S  G  L  S  K  K  L  W  *  H  P  I  R  D  L  Q  S  S  A  W  L  A  C  I  T  L  A  C  N  A  D  V  C  P  F  I  Y  C  V  D </first_frame>
            <second_frame>  P  F  L  C  L  A  L  L  P  I  L  F  A  L  V  L  S  C  L  I  S  L  P  L  P  P  A  I  S  F  I  S  V  S  T  I  C  Y  L  C  A  N  G  V  V  A  V  L  I  S  A  S  Q  L  L  F  Y  V  S  A  S  L  H  V  F  I  K  K  R :   S  Q  T  R  E  H  N  F  S  P  L  F  T  A  F  L  S  S  K  :  V  V  R  I  V  R  F  N  P  L  F  D  M  T  L  V  S  L  T  L  M  C  F  A  H  P  A  L  G  L  L  L  L  V  I  S  H  A  V  C  S  H  N  S  L  S  S :   F  L  M  A  S  F  H  S  R  T  Q  T  K  E  F  I  E  S  G  N  R  R  Q  S  G  S  K  Q  S  I  P  E  H  D  G  E  I  N  T  H  V  P  Q  K  E  S  N  S  S  S  L  D  S  V  K  S  Y  G  D  T  Q  L  E  I  F  N  H  R  H  G  L  L  V  L  H  L  L  A  M  L  M  F  V  P  S  F  I  A  W   </second_frame>
            <third_frame>   P  F  Y  V  W  P  C  Y  L  S  Y  L  L  L  Y  F  P  A  S  F  L  Y  L  F  L  Q  P  *  V  S  S  L  S  Q  Q  S  V  T  Y  V  Q  M  E  W  W  L  C  *  Y  Q  P  P  S  C  C  S  T  L  V  H  L  Y  M  Y  S  S  R  N   : G  R  K  H  G  N  I  T  F  L  L  F  S  L  P  S  C  H  P  R :   *  S  G  S  *  D  S  I  H  C  L  I  *  H  L  S  L  *  P  *  C  A  S  L  I  Q  H  W  V  F  F  C  W  S  F  L  M  L  C  A  P  T  I  P  C  P   : V  F  *  W  L  H  F  T  A  V  P  R  L  R  S  S  *  N  L  G  T  D  V  R  V  D  R  S  S  P  Y  P  S  M  M  V  K  S  T  R  M  F  L  R  R  R  V  I  P  V  V  W  T  Q  *  K  A  M  V  T  P  N  *  R  S  S  I  I  G  M  A  C  L  Y  Y  T  C  L  Q  C  *  C  L  S  L  H  L  L  R  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="31556" stop="31351"/>
                    <exon start="31003" stop="30946"/>
                    <exon start="30756" stop="30617"/>
                    <exon start="30372" stop="30105"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>672</number_coding_nucleotides>
                  <number_encoded_amino_acids>224</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PFLCLALLPILFALVLSCLISLPLPPAISFISVSTICYLCANGVVAVLISASQLLFYVSASLHVFIKKRSQTREHNFSPLFTAFLSSKVVRIVRFNPLFDMTLVSLTLMCFAHPALGLLLLVISHAVCSHNSLSSFLMASFHSRTQTKEFIESGNRRQSGSKQSIPEHDGEINTHVPQKESNSSSLDSVKSYGDTQLEIFNHRHGLLVLHLLAMLMFVPSFIAW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="51712" PGL_stop="49027"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="51712" e_stop="51300"/>
            <exon e_start="49849" e_stop="49027"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.985" e_score="0.988"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="51712" e_stop="51300" e_length="413"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.985">
            <gDNA_intron_boundary i_start="51299" i_stop="49850" i_length="1450"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="49849" e_stop="49027" e_length="823"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51712" stop="51300"/>
              <exon start="49849" stop="49712"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558241" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51640" stop="51300"/>
              <exon start="49849" stop="49582"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448792" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51374" stop="51300"/>
              <exon start="49849" stop="49106"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740991" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49734" stop="49027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E537926" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTCGCTTTGAAATCTGAAAATGGGGTTTATAGAGGATATGCTCCCGCCGGTAAAAATTGCAGGAAGTTGCCGGTGATGTTACAATTCCATGGTGGGGGGTTTGTGAGTGGGAGCAATGATTCGGTTTCAAATGATTTTTTCTGTAGAAGAATTGCAAAGCTTTGTGATGTCATTGTTTTGGCAGTTGGATACAGGTTATCACCTGAGAATAGATACCCAGCTGCATTTGAGGATGGGTTGAAAGCTCTGCATTGGCTGGCGAAGCAGGCCAATTTGGCTGAATGCAGCAAGTCATTGGGCAACAGACGTGGTGGAGCAGATGTGAAAAAATCTGATTCCCACGGACACATAGCGGATGCCTTTGGAGCATCAATGGCAGAGCCTTGGTTGGCTGCCCATGGAGATCCGTCGAG : GTGTGTTCTCCTTGGAGTGAGTTGTGGGGGAAACATAGCTGATTATGTGGCCCGAAAGGCAGTAGAAGCAGGCAATCTTTTGGACCCAGTCAAGGTGGTGGCACAGGTCTTGATGTATCCATTTTTCATTGGCAATGTTCCAACTCATTCTGAGATAAAGCTAGCTAATTCCTATTTCTATGACAAGGCAATGTGCGTACTTGCCTGGAAATTACTTTTACCTGAAGGAGAGTTTAACTTGGATCACCCTGCTGCCAACCCACTTGTTGCTGGTAGAGGAGGACCTCCGTTAAAACGAATGCCCCCAACATTGACAATTATAGCAGAGCATGACTGGATGAAAGATCGGGCTATTGCTTATTCAGAGGAACTCCGGAAAGTAAATGTTGATGCTCCTGTTCTTGAATATAAGGATGCTGTTCACGAGTTTGCAACTCTTGACATGCTTCTCAAGACCCCTCAGGCTCAGGCTTGTGCTGAGGATATTGCCATCTGGGTAAAGAAGCACATTTCACTCCGAGGTCATGAGTTTTCATATTGATTTGGATAGAGGTCTTGTACAGCAGCATCTCTGTGACAAATGCTACTCTCGATTTAAGGTTTAGCATTTATGCCTTATATAAGTTTCACGGCACATTCTTTTTTCCCTTGGGATGTTTCTTTTGTAATATAGATGTGATTTGCAGAAAAATAGGGGTTAGCTGAGTTTTGACTTTTGAACCACACATTCCTTCAATTTGAGTTAAAAGCATTTACGTGGTATCCTTGTAAACATTTTCCCTGTATCAAGAGATTTCTTTCATTAGCAGATAATGGAAGAGAT</gDNA_template>
            <first_frame> L  A  L  K  S  E  N  G  V  Y  R  G  Y  A  P  A  G  K  N  C  R  K  L  P  V  M  L  Q  F  H  G  G  G  F  V  S  G  S  N  D  S  V  S  N  D  F  F  C  R  R  I  A  K  L  C  D  V  I  V  L  A  V  G  Y  R  L  S  P  E  N  R  Y  P  A  A  F  E  D  G  L  K  A  L  H  W  L  A  K  Q  A  N  L  A  E  C  S  K  S  L  G  N  R  R  G  G  A  D  V  K  K  S  D  S  H  G  H  I  A  D  A  F  G  A  S  M  A  E  P  W  L  A  A  H  G  D  P  S  R :   C  V  L  L  G  V  S  C  G  G  N  I  A  D  Y  V  A  R  K  A  V  E  A  G  N  L  L  D  P  V  K  V  V  A  Q  V  L  M  Y  P  F  F  I  G  N  V  P  T  H  S  E  I  K  L  A  N  S  Y  F  Y  D  K  A  M  C  V  L  A  W  K  L  L  L  P  E  G  E  F  N  L  D  H  P  A  A  N  P  L  V  A  G  R  G  G  P  P  L  K  R  M  P  P  T  L  T  I  I  A  E  H  D  W  M  K  D  R  A  I  A  Y  S  E  E  L  R  K  V  N  V  D  A  P  V  L  E  Y  K  D  A  V  H  E  F  A  T  L  D  M  L  L  K  T  P  Q  A  Q  A  C  A  E  D  I  A  I  W  V  K  K  H  I  S  L  R  G  H  E  F  S  Y  *  F  G  *  R  S  C  T  A  A  S  L  *  Q  M  L  L  S  I  *  G  L  A  F  M  P  Y  I  S  F  T  A  H  S  F  F  P  W  D  V  S  F  V  I  *  M  *  F  A  E  K  *  G  L  A  E  F  *  L  L  N  H  T  F  L  Q  F  E  L  K  A  F  T  W  Y  P  C  K  H  F  P  C  I  K  R  F  L  S  L  A  D  N  G  R  D </first_frame>
            <second_frame>  S  L  *  N  L  K  M  G  F  I  E  D  M  L  P  P  V  K  I  A  G  S  C  R  *  C  Y  N  S  M  V  G  G  L  *  V  G  A  M  I  R  F  Q  M  I  F  S  V  E  E  L  Q  S  F  V  M  S  L  F  W  Q  L  D  T  G  Y  H  L  R  I  D  T  Q  L  H  L  R  M  G  *  K  L  C  I  G  W  R  S  R  P  I  W  L  N  A  A  S  H  W  A  T  D  V  V  E  Q  M  *  K  N  L  I  P  T  D  T  *  R  M  P  L  E  H  Q  W  Q  S  L  G  W  L  P  M  E  I  R  R   : G  V  F  S  L  E  *  V  V  G  E  T  *  L  I  M  W  P  E  R  Q  *  K  Q  A  I  F  W  T  Q  S  R  W  W  H  R  S  *  C  I  H  F  S  L  A  M  F  Q  L  I  L  R  *  S  *  L  I  P  I  S  M  T  R  Q  C  A  Y  L  P  G  N  Y  F  Y  L  K  E  S  L  T  W  I  T  L  L  P  T  H  L  L  L  V  E  E  D  L  R  *  N  E  C  P  Q  H  *  Q  L  *  Q  S  M  T  G  *  K  I  G  L  L  L  I  Q  R  N  S  G  K  *  M  L  M  L  L  F  L  N  I  R  M  L  F  T  S  L  Q  L  L  T  C  F  S  R  P  L  R  L  R  L  V  L  R  I  L  P  S  G  *  R  S  T  F  H  S  E  V  M  S  F  H  I  D  L  D  R  G  L  V  Q  Q  H  L  C  D  K  C  Y  S  R  F  K  V  *  H  L  C  L  I  *  V  S  R  H  I  L  F  S  L  G  M  F  L  L  *  Y  R  C  D  L  Q  K  N  R  G  *  L  S  F  D  F  *  T  T  H  S  F  N  L  S  *  K  H  L  R  G  I  L  V  N  I  F  P  V  S  R  D  F  F  H  *  Q  I  M  E  E   </second_frame>
            <third_frame>   R  F  E  I  *  K  W  G  L  *  R  I  C  S  R  R  *  K  L  Q  E  V  A  G  D  V  T  I  P  W  W  G  V  C  E  W  E  Q  *  F  G  F  K  *  F  F  L  *  K  N  C  K  A  L  *  C  H  C  F  G  S  W  I  Q  V  I  T  *  E  *  I  P  S  C  I  *  G  W  V  E  S  S  A  L  A  G  E  A  G  Q  F  G  *  M  Q  Q  V  I  G  Q  Q  T  W  W  S  R  C  E  K  I  *  F  P  R  T  H  S  G  C  L  W  S  I  N  G  R  A  L  V  G  C  P  W  R  S  V  E  :  V  C  S  P  W  S  E  L  W  G  K  H  S  *  L  C  G  P  K  G  S  R  S  R  Q  S  F  G  P  S  Q  G  G  G  T  G  L  D  V  S  I  F  H  W  Q  C  S  N  S  F  *  D  K  A  S  *  F  L  F  L  *  Q  G  N  V  R  T  C  L  E  I  T  F  T  *  R  R  V  *  L  G  S  P  C  C  Q  P  T  C  C  W  *  R  R  T  S  V  K  T  N  A  P  N  I  D  N  Y  S  R  A  *  L  D  E  R  S  G  Y  C  L  F  R  G  T  P  E  S  K  C  *  C  S  C  S  *  I  *  G  C  C  S  R  V  C  N  S  *  H  A  S  Q  D  P  S  G  S  G  L  C  *  G  Y  C  H  L  G  K  E  A  H  F  T  P  R  S  *  V  F  I  L  I  W  I  E  V  L  Y  S  S  I  S  V  T  N  A  T  L  D  L  R  F  S  I  Y  A  L  Y  K  F  H  G  T  F  F  F  P  L  G  C  F  F  C  N  I  D  V  I  C  R  K  I  G  V  S  *  V  L  T  F  E  P  H  I  P  S  I  *  V  K  S  I  Y  V  V  S  L  *  T  F  S  L  Y  Q  E  I  S  F  I  S  R  *  W  K  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="51712" stop="51300"/>
                    <exon start="49849" stop="49309"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>951</number_coding_nucleotides>
                  <number_encoded_amino_acids>317</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LALKSENGVYRGYAPAGKNCRKLPVMLQFHGGGFVSGSNDSVSNDFFCRRIAKLCDVIVLAVGYRLSPENRYPAAFEDGLKALHWLAKQANLAECSKSLGNRRGGADVKKSDSHGHIADAFGASMAEPWLAAHGDPSRCVLLGVSCGGNIADYVARKAVEAGNLLDPVKVVAQVLMYPFFIGNVPTHSEIKLANSYFYDKAMCVLAWKLLLPEGEFNLDHPAANPLVAGRGGPPLKRMPPTLTIIAEHDWMKDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDMLLKTPQAQACAEDIAIWVKKHISLRGHEFSY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="50766" e_stop="50049"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="50766" e_stop="50049" e_length="718"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50766" stop="50049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E537928" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50765" stop="50154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265826" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTGGTATGACTGGCAAATTCAATTTCTGAATAGAAGTGTTCCTTTTCTTCTTTTTCCTTTTTGGGTGAAACTGTAAGTGTTTTTGATGTAGGTCTTGGTTGTCTTTCAGTACTTGTTTTGAATACTTTTTGGATTTTTATCAGTTTGTTTCTCATCCAGAACCCTTGCACAATCCATGTGGGACAATTATACAACTAAGCACCTCCTCTCTCATGTAACTATATTTGTTCGTTTCAATTTGTTTGTCCTACTTTCCTTTTTAGTCTATTTAAAAAAGAATGACTTTTTTAGCAACTCTTCAGTTTCAATCTCCCCCCATGTCATGTTTAAGACCACGTTATTAAAGGACATTGTGGTACATTTGACATATCTTTAATATAAGACCAGAAGATTTCAAAAGCCTTCTTTACTTTTTTAAACTCCGTGTCAAGACAAAATAGGACAAAAAATTTGAAACGAAGGGAGTACTAATCAGAGGAATGTCCTTCACCAAATATTTGGCTCTATTATCATGTAAAAAGAATTTGAGTATCCAATTCAGAACCCCAAGTCAATGGGTGGAGTAGTTCAAGACCTTTATAAGCTGCTTTGAAAGCCCTTTAACAACCCATGCAGGGCAATTGAATAAAACACTTTCAAATTAACTTCTTCACTTACATTTGAAAATAAAGAGCTTCAGTCCAGCTTTCCTGCAAGATGAGTTTCCTCCATGAATC</gDNA_template>
            <first_frame> V  W  Y  D  W  Q  I  Q  F  L  N  R  S  V  P  F  L  L  F  P  F  W  V  K  L  *  V  F  L  M  *  V  L  V  V  F  Q  Y  L  F  *  I  L  F  G  F  L  S  V  C  F  S  S  R  T  L  A  Q  S  M  W  D  N  Y  T  T  K  H  L  L  S  H  V  T  I  F  V  R  F  N  L  F  V  L  L  S  F  L  V  Y  L  K  K  N  D  F  F  S  N  S  S  V  S  I  S  P  H  V  M  F  K  T  T  L  L  K  D  I  V  V  H  L  T  Y  L  *  Y  K  T  R  R  F  Q  K  P  S  L  L  F  *  T  P  C  Q  D  K  I  G  Q  K  I  *  N  E  G  S  T  N  Q  R  N  V  L  H  Q  I  F  G  S  I  I  M  *  K  E  F  E  Y  P  I  Q  N  P  K  S  M  G  G  V  V  Q  D  L  Y  K  L  L  *  K  P  F  N  N  P  C  R  A  I  E  *  N  T  F  K  L  T  S  S  L  T  F  E  N  K  E  L  Q  S  S  F  P  A  R  *  V  S  S  M  N  </first_frame>
            <second_frame>  F  G  M  T  G  K  F  N  F  *  I  E  V  F  L  F  F  F  F  L  F  G  *  N  C  K  C  F  *  C  R  S  W  L  S  F  S  T  C  F  E  Y  F  L  D  F  Y  Q  F  V  S  H  P  E  P  L  H  N  P  C  G  T  I  I  Q  L  S  T  S  S  L  M  *  L  Y  L  F  V  S  I  C  L  S  Y  F  P  F  *  S  I  *  K  R  M  T  F  L  A  T  L  Q  F  Q  S  P  P  M  S  C  L  R  P  R  Y  *  R  T  L  W  Y  I  *  H  I  F  N  I  R  P  E  D  F  K  S  L  L  Y  F  F  K  L  R  V  K  T  K  *  D  K  K  F  E  T  K  G  V  L  I  R  G  M  S  F  T  K  Y  L  A  L  L  S  C  K  K  N  L  S  I  Q  F  R  T  P  S  Q  W  V  E  *  F  K  T  F  I  S  C  F  E  S  P  L  T  T  H  A  G  Q  L  N  K  T  L  S  N  *  L  L  H  L  H  L  K  I  K  S  F  S  P  A  F  L  Q  D  E  F  P  P  *  I </second_frame>
            <third_frame>   L  V  *  L  A  N  S  I  S  E  *  K  C  S  F  S  S  F  S  F  L  G  E  T  V  S  V  F  D  V  G  L  G  C  L  S  V  L  V  L  N  T  F  W  I  F  I  S  L  F  L  I  Q  N  P  C  T  I  H  V  G  Q  L  Y  N  *  A  P  P  L  S  C  N  Y  I  C  S  F  Q  F  V  C  P  T  F  L  F  S  L  F  K  K  E  *  L  F  *  Q  L  F  S  F  N  L  P  P  C  H  V  *  D  H  V  I  K  G  H  C  G  T  F  D  I  S  L  I  *  D  Q  K  I  S  K  A  F  F  T  F  L  N  S  V  S  R  Q  N  R  T  K  N  L  K  R  R  E  Y  *  S  E  E  C  P  S  P  N  I  W  L  Y  Y  H  V  K  R  I  *  V  S  N  S  E  P  Q  V  N  G  W  S  S  S  R  P  L  *  A  A  L  K  A  L  *  Q  P  M  Q  G  N  *  I  K  H  F  Q  I  N  F  F  T  Y  I  *  K  *  R  A  S  V  Q  L  S  C  K  M  S  F  L  H  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50643" stop="50389"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>252</number_coding_nucleotides>
                  <number_encoded_amino_acids>84</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILFGFLSVCFSSRTLAQSMWDNYTTKHLLSHVTIFVRFNLFVLLSFLVYLKKNDFFSNSSVSISPHVMFKTTLLKDIVVHLTYL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="58747" PGL_stop="53109"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="58747" e_stop="58543"/>
            <exon e_start="58459" e_stop="58298"/>
            <exon e_start="57976" e_stop="56550"/>
            <exon e_start="53963" e_stop="53109"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.821" acc_prob="0.993" e_score="0.917"/>
          <exon-intron don_prob="0.995" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.917">
            <gDNA_exon_boundary e_start="58747" e_stop="58543" e_length="205"/>
          </exon>
          <intron i_serial="1" don_prob="0.821" acc_prob="0.993">
            <gDNA_intron_boundary i_start="58542" i_stop="58460" i_length="83"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="58459" e_stop="58298" e_length="162"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.992">
            <gDNA_intron_boundary i_start="58297" i_stop="57977" i_length="321"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="57976" e_stop="56550" e_length="1427"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="1.000">
            <gDNA_intron_boundary i_start="56549" i_stop="53964" i_length="2586"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="53963" e_stop="53109" e_length="855"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58747" stop="58543"/>
              <exon start="58459" stop="58298"/>
              <exon start="57976" stop="57740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367159" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58648" stop="58543"/>
              <exon start="58459" stop="58404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252118" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58637" stop="58543"/>
              <exon start="58459" stop="58298"/>
              <exon start="57976" stop="57508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213524" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58610" stop="58543"/>
              <exon start="58459" stop="58298"/>
              <exon start="57976" stop="57380"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736983" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58610" stop="58543"/>
              <exon start="58459" stop="58298"/>
              <exon start="57976" stop="57467"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737035" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57517" stop="56728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542329" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57374" stop="56552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E726665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57360" stop="56721"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E454262" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56720" stop="56550"/>
              <exon start="53963" stop="53876"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611753" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56661" stop="56550"/>
              <exon start="53963" stop="53592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457999" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53867" stop="53468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396999" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53866" stop="53371"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284406" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53724" stop="53109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542326" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAATCAAAACAAAAAAAAAAAAGAAGAATAATTGTAGCTAACCAAACACATCAAAAACAACAACCAGAGATTGGTTTTTGTCTATTTTTGTCTAATCCATCACACCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTAT : GGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAG : ATGAAAAAGAGTTTTACTGGTCTAGACAGGTAGTCTGTGGTCTCATTTGTTTATTGGTTTAGGGGGTGGCAGATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGCGATGGAGGAAGCTCTGCATCACCGTCCAATGCTTCAACTGGTTCTAGAAGCAGTGATTTGTCTACTGCGCAGTCAGGAAATTCAAGTGCCACTACTGTTTCAGGAGTCACTTCTTCAACTCTGGGACCAAATCATGGAAATAGGCTACCGCAGGGGGCAAATGCTAAGGTGAATGGAAGTGCAGCAGTTTTTCTGTGTGAGACCTTGCCTAGTTTTAAAGATGTACCAACTGCTGAGAAACAAAACTTGTTCATAAAAAAACTGAACTTGTGCTGTGTATTATTTGACTTTACTGACCCAACAAAGCACTTGAAAGAAAAAGACATCAAGCGGCAGACATTAATAGAGCTTGTTGATTATCTTAGTTCTGCAAATGGAAAATTCACAGAAACTGTCATTCAAGAAATTGTTAAAATGGTGTCTTCAAATCTGTTCAGGTCTCTAACTCCTCAACCTCGTGAAAACAAAGTATTGGAAGCTTTTGACTTGGAAGATGACGAACCCTTGATGGATCCCGCATGGCCACATTTGCAAATTGTGTATGAGTTCTTTCTCAGATTTGTGGCATCACCGGAGACAGATGCAAAATTGTCTAAGCGATATGTTGACCATTCTTTTGTTCTAAGGTTATTAGATCTCTTTGATTCAGAAGATCCAAGAGAAAGGGAGTTCTTGAAGACGGTTCTGCACCGAATATATGGAAAATTCATGGTGCACCGCCCTTTTATTAGGAAATCAATCAACAATATATTTTACCGGTTTATCTTTGAAACTGAGAAGCATAATGGAATAGCAGAACTTTTAGAAATTTTGGGCAGTATAATCAATGGATTTGCACTTCCACTGAAGGAAGAGCACAAGTTGTTCCTTGTCCGAGCTCTTATTCCACTTCATAAACCAAAGTGCGTACACATGTATCATCAGCAGTTATCTTACTGCATAACACAATTTGTGGAGAAGGATTGCAAGCTTGCTGATACTGTCATAAGAGGTTTGTTGAAATATTGGCCTATCACAAACAGTTCCAAGGAAGTAGTGTTCTTAGGTGAGCTGGAGGAGGTTCTAGAAGCAACTCAGCCTCCAGAATTCCAGCGTTGTATGGTGCCTTTGTTTCATCAGATCAGTCGTTGTTTGAGCAGCTCGCACTTTCAG : GTGGCTGAGAGGGCCTTGTTCCTATGGAACAATGATCATGTTGAGAACCTAATCAAACAAAATCATAGAGTTATACTGCCGATAATCTTCCCTTCCTTGGAGAAGAATGCTAGAGGCCACTGGAATCAGGCGGTGCAAAACTTGACATTAAATGTCCGCAAGATCTTCTCTGATATCGATTCTGAACTCTTTGAAGAGTGTTTGCAGAAATTCGAAGAAGACGAGGCCCAAGAAGAGGAGGTAAAGAGGAAACGTGAAATTACTTGGAAACGGTTAGAGGAGCTTGCTGGAGTGAAAGCTGCAAGCAATGAGCCAGTGCTAGTTTCTCATAAGATAACACCTCATCCACCATCTGGCTAGAGACTGTATCTTTGTTACTGTTGCTTTTCCCTTGATCAGCTGATCAGTACGCTAATTGAGAAAGGAGGTAATATCTCATTTGTTCATACACCAAGACATCCTGAATTTTTTGTTCCCAGGTCTCACTTTATGGTAACACAAATCAAGTTGGATACCAAGTCAGTGCTAATATAGAGGCAAGGACTGTTCCTACGGAATTGCGTAACTGGAGAAGCTCAAGATTTTATAGTCTGCTGTCCATGCGTGGCTCGAGTTCATTTGGTGTTTGCTTTGTTGGAGTTTCTAACGATGAGATTATAAAAGCGTCATACTTGAGGTATACGTCTAAAGTTCCTTTTAGGGTGCTGCGCTTGAATCTCTGTACACCGTCAATATATATGCTTTGACATTGCAGCTTGGCATGAAAGTATCCCTGTAGATAATCTTGAGAATGTTCAAATGAAGTTGACATAATTAAGTTGCAATGTTTCAAGTAGAGTAATTCTTTGGAATTCA</gDNA_template>
            <first_frame> K  N  Q  N  K  K  K  K  E  E  *  L  *  L  T  K  H  I  K  N  N  N  Q  R  L  V  F  V  Y  F  C  L  I  H  H  T  H  F  P  I  F  P  Q  L  G  M  F  L  D  F  D  H  *  T  P  T  I  *  S  F  N  L  F  H  H  S  K  L   : W  M  L  S  G  F  F  R  T  S  F  A  Q  I  L  I  F  F  D  L  A  *  Q  A  R  V  S  V  D  L  S  K  K  T  R  T  K  V  Y  C  T  S  P  V  L  F  S  G  *  Q  L  A  W  I   : D  E  K  E  F  Y  W  S  R  Q  V  V  C  G  L  I  C  L  L  V  *  G  V  A  D  K  D  S  G  W  M  R  S  A  L  A  C  *  Q  F  I  L  L  L  R  P  F  R  L  M  K  V  L  F  *  G  C  L  N  Q  *  N  I  T  T  R  R  S  Y  F  Q  V  M  I  K  Q  I  L  N  R  L  P  R  K  P  S  K  S  A  E  N  R  D  G  G  S  S  A  S  P  S  N  A  S  T  G  S  R  S  S  D  L  S  T  A  Q  S  G  N  S  S  A  T  T  V  S  G  V  T  S  S  T  L  G  P  N  H  G  N  R  L  P  Q  G  A  N  A  K  V  N  G  S  A  A  V  F  L  C  E  T  L  P  S  F  K  D  V  P  T  A  E  K  Q  N  L  F  I  K  K  L  N  L  C  C  V  L  F  D  F  T  D  P  T  K  H  L  K  E  K  D  I  K  R  Q  T  L  I  E  L  V  D  Y  L  S  S  A  N  G  K  F  T  E  T  V  I  Q  E  I  V  K  M  V  S  S  N  L  F  R  S  L  T  P  Q  P  R  E  N  K  V  L  E  A  F  D  L  E  D  D  E  P  L  M  D  P  A  W  P  H  L  Q  I  V  Y  E  F  F  L  R  F  V  A  S  P  E  T  D  A  K  L  S  K  R  Y  V  D  H  S  F  V  L  R  L  L  D  L  F  D  S  E  D  P  R  E  R  E  F  L  K  T  V  L  H  R  I  Y  G  K  F  M  V  H  R  P  F  I  R  K  S  I  N  N  I  F  Y  R  F  I  F  E  T  E  K  H  N  G  I  A  E  L  L  E  I  L  G  S  I  I  N  G  F  A  L  P  L  K  E  E  H  K  L  F  L  V  R  A  L  I  P  L  H  K  P  K  C  V  H  M  Y  H  Q  Q  L  S  Y  C  I  T  Q  F  V  E  K  D  C  K  L  A  D  T  V  I  R  G  L  L  K  Y  W  P  I  T  N  S  S  K  E  V  V  F  L  G  E  L  E  E  V  L  E  A  T  Q  P  P  E  F  Q  R  C  M  V  P  L  F  H  Q  I  S  R  C  L  S  S  S  H  F  Q  :  V  A  E  R  A  L  F  L  W  N  N  D  H  V  E  N  L  I  K  Q  N  H  R  V  I  L  P  I  I  F  P  S  L  E  K  N  A  R  G  H  W  N  Q  A  V  Q  N  L  T  L  N  V  R  K  I  F  S  D  I  D  S  E  L  F  E  E  C  L  Q  K  F  E  E  D  E  A  Q  E  E  E  V  K  R  K  R  E  I  T  W  K  R  L  E  E  L  A  G  V  K  A  A  S  N  E  P  V  L  V  S  H  K  I  T  P  H  P  P  S  G  *  R  L  Y  L  C  Y  C  C  F  S  L  D  Q  L  I  S  T  L  I  E  K  G  G  N  I  S  F  V  H  T  P  R  H  P  E  F  F  V  P  R  S  H  F  M  V  T  Q  I  K  L  D  T  K  S  V  L  I  *  R  Q  G  L  F  L  R  N  C  V  T  G  E  A  Q  D  F  I  V  C  C  P  C  V  A  R  V  H  L  V  F  A  L  L  E  F  L  T  M  R  L  *  K  R  H  T  *  G  I  R  L  K  F  L  L  G  C  C  A  *  I  S  V  H  R  Q  Y  I  C  F  D  I  A  A  W  H  E  S  I  P  V  D  N  L  E  N  V  Q  M  K  L  T  *  L  S  C  N  V  S  S  R  V  I  L  W  N  S </first_frame>
            <second_frame>  K  I  K  T  K  K  K  K  K  N  N  C  S  *  P  N  T  S  K  T  T  T  R  D  W  F  L  S  I  F  V  *  S  I  T  P  I  F  L  S  F  L  S  W  E  C  F  *  I  S  I  T  E  P  Q  L  S  K  V  S  I  F  F  I  T  Q  N  Y  :  G  C  Y  L  G  S  S  V  H  H  L  P  R  S  *  Y  S  L  T  *  L  N  R  P  E  S  L  W  T  S  A  K  K  Q  E  Q  R  F  T  A  P  P  R  F  F  F  L  V  D  S  *  H  G  *  :  M  K  K  S  F  T  G  L  D  R  *  S  V  V  S  F  V  Y  W  F  R  G  W  Q  I  R  I  R  G  G  *  D  L  H  W  L  A  N  N  S  F  C  C  L  D  L  S  D  *  *  K  F  C  F  E  G  V  *  I  S  K  T  L  R  P  E  D  H  I  F  K  *  *  S  N  R  Y  L  I  G  S  L  E  S  L  P  S  Q  Q  K  I  A  M  E  E  A  L  H  H  R  P  M  L  Q  L  V  L  E  A  V  I  C  L  L  R  S  Q  E  I  Q  V  P  L  L  F  Q  E  S  L  L  Q  L  W  D  Q  I  M  E  I  G  Y  R  R  G  Q  M  L  R  *  M  E  V  Q  Q  F  F  C  V  R  P  C  L  V  L  K  M  Y  Q  L  L  R  N  K  T  C  S  *  K  N  *  T  C  A  V  Y  Y  L  T  L  L  T  Q  Q  S  T  *  K  K  K  T  S  S  G  R  H  *  *  S  L  L  I  I  L  V  L  Q  M  E  N  S  Q  K  L  S  F  K  K  L  L  K  W  C  L  Q  I  C  S  G  L  *  L  L  N  L  V  K  T  K  Y  W  K  L  L  T  W  K  M  T  N  P  *  W  I  P  H  G  H  I  C  K  L  C  M  S  S  F  S  D  L  W  H  H  R  R  Q  M  Q  N  C  L  S  D  M  L  T  I  L  L  F  *  G  Y  *  I  S  L  I  Q  K  I  Q  E  K  G  S  S  *  R  R  F  C  T  E  Y  M  E  N  S  W  C  T  A  L  L  L  G  N  Q  S  T  I  Y  F  T  G  L  S  L  K  L  R  S  I  M  E  *  Q  N  F  *  K  F  W  A  V  *  S  M  D  L  H  F  H  *  R  K  S  T  S  C  S  L  S  E  L  L  F  H  F  I  N  Q  S  A  Y  T  C  I  I  S  S  Y  L  T  A  *  H  N  L  W  R  R  I  A  S  L  L  I  L  S  *  E  V  C  *  N  I  G  L  S  Q  T  V  P  R  K  *  C  S  *  V  S  W  R  R  F  *  K  Q  L  S  L  Q  N  S  S  V  V  W  C  L  C  F  I  R  S  V  V  V  *  A  A  R  T  F  R :   W  L  R  G  P  C  S  Y  G  T  M  I  M  L  R  T  *  S  N  K  I  I  E  L  Y  C  R  *  S  S  L  P  W  R  R  M  L  E  A  T  G  I  R  R  C  K  T  *  H  *  M  S  A  R  S  S  L  I  S  I  L  N  S  L  K  S  V  C  R  N  S  K  K  T  R  P  K  K  R  R  *  R  G  N  V  K  L  L  G  N  G  *  R  S  L  L  E  *  K  L  Q  A  M  S  Q  C  *  F  L  I  R  *  H  L  I  H  H  L  A  R  D  C  I  F  V  T  V  A  F  P  L  I  S  *  S  V  R  *  L  R  K  E  V  I  S  H  L  F  I  H  Q  D  I  L  N  F  L  F  P  G  L  T  L  W  *  H  K  S  S  W  I  P  S  Q  C  *  Y  R  G  K  D  C  S  Y  G  I  A  *  L  E  K  L  K  I  L  *  S  A  V  H  A  W  L  E  F  I  W  C  L  L  C  W  S  F  *  R  *  D  Y  K  S  V  I  L  E  V  Y  V  *  S  S  F  *  G  A  A  L  E  S  L  Y  T  V  N  I  Y  A  L  T  L  Q  L  G  M  K  V  S  L  *  I  I  L  R  M  F  K  *  S  *  H  N  *  V  A  M  F  Q  V  E  *  F  F  G  I   </second_frame>
            <third_frame>   K  S  K  Q  K  K  K  R  R  I  I  V  A  N  Q  T  H  Q  K  Q  Q  P  E  I  G  F  C  L  F  L  S  N  P  S  H  P  F  S  Y  L  S  S  V  G  N  V  F  R  F  R  S  L  N  P  N  Y  L  K  F  Q  S  F  S  S  L  K  I  M :   D  V  I  W  V  L  P  Y  I  I  C  P  D  L  N  I  L  *  P  S  L  T  G  Q  S  L  C  G  P  Q  Q  K  N  K  N  K  G  L  L  H  L  P  G  S  F  F  W  L  T  A  S  M  D  R :   *  K  R  V  L  L  V  *  T  G  S  L  W  S  H  L  F  I  G  L  G  G  G  R  *  G  F  G  V  D  E  I  C  T  G  L  L  T  I  H  F  A  A  *  T  F  Q  I  D  E  S  S  V  L  R  V  F  K  S  V  K  H  Y  D  Q  K  I  I  F  S  S  D  D  Q  T  D  T  *  *  A  P  *  K  A  F  Q  V  S  R  K  S  R  W  R  K  L  C  I  T  V  Q  C  F  N  W  F  *  K  Q  *  F  V  Y  C  A  V  R  K  F  K  C  H  Y  C  F  R  S  H  F  F  N  S  G  T  K  S  W  K  *  A  T  A  G  G  K  C  *  G  E  W  K  C  S  S  F  S  V  *  D  L  A  *  F  *  R  C  T  N  C  *  E  T  K  L  V  H  K  K  T  E  L  V  L  C  I  I  *  L  Y  *  P  N  K  A  L  E  R  K  R  H  Q  A  A  D  I  N  R  A  C  *  L  S  *  F  C  K  W  K  I  H  R  N  C  H  S  R  N  C  *  N  G  V  F  K  S  V  Q  V  S  N  S  S  T  S  *  K  Q  S  I  G  S  F  *  L  G  R  *  R  T  L  D  G  S  R  M  A  T  F  A  N  C  V  *  V  L  S  Q  I  C  G  I  T  G  D  R  C  K  I  V  *  A  I  C  *  P  F  F  C  S  K  V  I  R  S  L  *  F  R  R  S  K  R  K  G  V  L  E  D  G  S  A  P  N  I  W  K  I  H  G  A  P  P  F  Y  *  E  I  N  Q  Q  Y  I  L  P  V  Y  L  *  N  *  E  A  *  W  N  S  R  T  F  R  N  F  G  Q  Y  N  Q  W  I  C  T  S  T  E  G  R  A  Q  V  V  P  C  P  S  S  Y  S  T  S  *  T  K  V  R  T  H  V  S  S  A  V  I  L  L  H  N  T  I  C  G  E  G  L  Q  A  C  *  Y  C  H  K  R  F  V  E  I  L  A  Y  H  K  Q  F  Q  G  S  S  V  L  R  *  A  G  G  G  S  R  S  N  S  A  S  R  I  P  A  L  Y  G  A  F  V  S  S  D  Q  S  L  F  E  Q  L  A  L  S   : G  G  *  E  G  L  V  P  M  E  Q  *  S  C  *  E  P  N  Q  T  K  S  *  S  Y  T  A  D  N  L  P  F  L  G  E  E  C  *  R  P  L  E  S  G  G  A  K  L  D  I  K  C  P  Q  D  L  L  *  Y  R  F  *  T  L  *  R  V  F  A  E  I  R  R  R  R  G  P  R  R  G  G  K  E  E  T  *  N  Y  L  E  T  V  R  G  A  C  W  S  E  S  C  K  Q  *  A  S  A  S  F  S  *  D  N  T  S  S  T  I  W  L  E  T  V  S  L  L  L  L  L  F  P  *  S  A  D  Q  Y  A  N  *  E  R  R  *  Y  L  I  C  S  Y  T  K  T  S  *  I  F  C  S  Q  V  S  L  Y  G  N  T  N  Q  V  G  Y  Q  V  S  A  N  I  E  A  R  T  V  P  T  E  L  R  N  W  R  S  S  R  F  Y  S  L  L  S  M  R  G  S  S  S  F  G  V  C  F  V  G  V  S  N  D  E  I  I  K  A  S  Y  L  R  Y  T  S  K  V  P  F  R  V  L  R  L  N  L  C  T  P  S  I  Y  M  L  *  H  C  S  L  A  *  K  Y  P  C  R  *  S  *  E  C  S  N  E  V  D  I  I  K  L  Q  C  F  K  *  S  N  S  L  E  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57794" stop="56550"/>
                    <exon start="53963" stop="53604"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1602</number_coding_nucleotides>
                  <number_encoded_amino_acids>534</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NITTRRSYFQVMIKQILNRLPRKPSKSAENRDGGSSASPSNASTGSRSSDLSTAQSGNSSATTVSGVTSSTLGPNHGNRLPQGANAKVNGSAAVFLCETLPSFKDVPTAEKQNLFIKKLNLCCVLFDFTDPTKHLKEKDIKRQTLIELVDYLSSANGKFTETVIQEIVKMVSSNLFRSLTPQPRENKVLEAFDLEDDEPLMDPAWPHLQIVYEFFLRFVASPETDAKLSKRYVDHSFVLRLLDLFDSEDPREREFLKTVLHRIYGKFMVHRPFIRKSINNIFYRFIFETEKHNGIAELLEILGSIINGFALPLKEEHKLFLVRALIPLHKPKCVHMYHQQLSYCITQFVEKDCKLADTVIRGLLKYWPITNSSKEVVFLGELEEVLEATQPPEFQRCMVPLFHQISRCLSSSHFQVAERALFLWNNDHVENLIKQNHRVILPIIFPSLEKNARGHWNQAVQNLTLNVRKIFSDIDSELFEECLQKFEEDEAQEEEVKRKREITWKRLEELAGVKAASNEPVLVSHKITPHPPSG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53499" stop="53218"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFCSQVSLYGNTNQVGYQVSANIEARTVPTELRNWRSSRFYSLLSMRGSSSFGVCFVGVSNDEIIKASYLRYTSKVPFRVLRLNLCTPSIYML*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58745" stop="58543"/>
                    <exon start="58459" stop="58405"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KSKQKKKRRIIVANQTHQKQQPEIGFCLFLSNPSHPFSYLSSVGNVFRFRSLNPNYLKFQSFSSLKIMDVIWVLPYIICPDLNIL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="54361" e_stop="53109"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="54361" e_stop="53109" e_length="1253"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54361" stop="53839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404520" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53867" stop="53468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E396999" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53866" stop="53371"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284406" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53724" stop="53109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542326" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCTCTTTCCAAACATCCTAAAATGAAAAGGGAAAAATCTGGTTTGCCAGAGAGAGATAGTTGCTTTTCAGAAGTTCACTTCTGTTTGTGTGGGTCAACAAGCAGACTAAATTTACTGCATCTTGATGGCTTTTCCTCCTGCCGGATATAATGTGCTAGTTTGCTGTTTTCAGTTGTACCTCATGAAACAACTTGATATAAGTAACTGTACATCAAGTGATGGCACATATTGGCTAAGTTGTCATGGCTGTGAATCAAATAGAAAAACGATCAATCAACTGAAAAAATGGTGTGCTTGCTTGAAATGAGATGGATTGGATCAATTCGGTGATGTAACATCTGCCAATGCCTTTTTTTATTTTGTCTTTTCTCTAACTTTTTTTAACTTTGCATCTTCAGGTGGCTGAGAGGGCCTTGTTCCTATGGAACAATGATCATGTTGAGAACCTAATCAAACAAAATCATAGAGTTATACTGCCGATAATCTTCCCTTCCTTGGAGAAGAATGCTAGAGGCCACTGGAATCAGGCGGTGCAAAACTTGACATTAAATGTCCGCAAGATCTTCTCTGATATCGATTCTGAACTCTTTGAAGAGTGTTTGCAGAAATTCGAAGAAGACGAGGCCCAAGAAGAGGAGGTAAAGAGGAAACGTGAAATTACTTGGAAACGGTTAGAGGAGCTTGCTGGAGTGAAAGCTGCAAGCAATGAGCCAGTGCTAGTTTCTCATAAGATAACACCTCATCCACCATCTGGCTAGAGACTGTATCTTTGTTACTGTTGCTTTTCCCTTGATCAGCTGATCAGTACGCTAATTGAGAAAGGAGGTAATATCTCATTTGTTCATACACCAAGACATCCTGAATTTTTTGTTCCCAGGTCTCACTTTATGGTAACACAAATCAAGTTGGATACCAAGTCAGTGCTAATATAGAGGCAAGGACTGTTCCTACGGAATTGCGTAACTGGAGAAGCTCAAGATTTTATAGTCTGCTGTCCATGCGTGGCTCGAGTTCATTTGGTGTTTGCTTTGTTGGAGTTTCTAACGATGAGATTATAAAAGCGTCATACTTGAGGTATACGTCTAAAGTTCCTTTTAGGGTGCTGCGCTTGAATCTCTGTACACCGTCAATATATATGCTTTGACATTGCAGCTTGGCATGAAAGTATCCCTGTAGATAATCTTGAGAATGTTCAAATGAAGTTGACATAATTAAGTTGCAATGTTTCAAGTAGAGTAATTCTTTGGAATTCA</gDNA_template>
            <first_frame> P  L  S  K  H  P  K  M  K  R  E  K  S  G  L  P  E  R  D  S  C  F  S  E  V  H  F  C  L  C  G  S  T  S  R  L  N  L  L  H  L  D  G  F  S  S  C  R  I  *  C  A  S  L  L  F  S  V  V  P  H  E  T  T  *  Y  K  *  L  Y  I  K  *  W  H  I  L  A  K  L  S  W  L  *  I  K  *  K  N  D  Q  S  T  E  K  M  V  C  L  L  E  M  R  W  I  G  S  I  R  *  C  N  I  C  Q  C  L  F  L  F  C  L  F  S  N  F  F  *  L  C  I  F  R  W  L  R  G  P  C  S  Y  G  T  M  I  M  L  R  T  *  S  N  K  I  I  E  L  Y  C  R  *  S  S  L  P  W  R  R  M  L  E  A  T  G  I  R  R  C  K  T  *  H  *  M  S  A  R  S  S  L  I  S  I  L  N  S  L  K  S  V  C  R  N  S  K  K  T  R  P  K  K  R  R  *  R  G  N  V  K  L  L  G  N  G  *  R  S  L  L  E  *  K  L  Q  A  M  S  Q  C  *  F  L  I  R  *  H  L  I  H  H  L  A  R  D  C  I  F  V  T  V  A  F  P  L  I  S  *  S  V  R  *  L  R  K  E  V  I  S  H  L  F  I  H  Q  D  I  L  N  F  L  F  P  G  L  T  L  W  *  H  K  S  S  W  I  P  S  Q  C  *  Y  R  G  K  D  C  S  Y  G  I  A  *  L  E  K  L  K  I  L  *  S  A  V  H  A  W  L  E  F  I  W  C  L  L  C  W  S  F  *  R  *  D  Y  K  S  V  I  L  E  V  Y  V  *  S  S  F  *  G  A  A  L  E  S  L  Y  T  V  N  I  Y  A  L  T  L  Q  L  G  M  K  V  S  L  *  I  I  L  R  M  F  K  *  S  *  H  N  *  V  A  M  F  Q  V  E  *  F  F  G  I   </first_frame>
            <second_frame>  L  F  P  N  I  L  K  *  K  G  K  N  L  V  C  Q  R  E  I  V  A  F  Q  K  F  T  S  V  C  V  G  Q  Q  A  D  *  I  Y  C  I  L  M  A  F  P  P  A  G  Y  N  V  L  V  C  C  F  Q  L  Y  L  M  K  Q  L  D  I  S  N  C  T  S  S  D  G  T  Y  W  L  S  C  H  G  C  E  S  N  R  K  T  I  N  Q  L  K  K  W  C  A  C  L  K  *  D  G  L  D  Q  F  G  D  V  T  S  A  N  A  F  F  Y  F  V  F  S  L  T  F  F  N  F  A  S  S  G  G  *  E  G  L  V  P  M  E  Q  *  S  C  *  E  P  N  Q  T  K  S  *  S  Y  T  A  D  N  L  P  F  L  G  E  E  C  *  R  P  L  E  S  G  G  A  K  L  D  I  K  C  P  Q  D  L  L  *  Y  R  F  *  T  L  *  R  V  F  A  E  I  R  R  R  R  G  P  R  R  G  G  K  E  E  T  *  N  Y  L  E  T  V  R  G  A  C  W  S  E  S  C  K  Q  *  A  S  A  S  F  S  *  D  N  T  S  S  T  I  W  L  E  T  V  S  L  L  L  L  L  F  P  *  S  A  D  Q  Y  A  N  *  E  R  R  *  Y  L  I  C  S  Y  T  K  T  S  *  I  F  C  S  Q  V  S  L  Y  G  N  T  N  Q  V  G  Y  Q  V  S  A  N  I  E  A  R  T  V  P  T  E  L  R  N  W  R  S  S  R  F  Y  S  L  L  S  M  R  G  S  S  S  F  G  V  C  F  V  G  V  S  N  D  E  I  I  K  A  S  Y  L  R  Y  T  S  K  V  P  F  R  V  L  R  L  N  L  C  T  P  S  I  Y  M  L  *  H  C  S  L  A  *  K  Y  P  C  R  *  S  *  E  C  S  N  E  V  D  I  I  K  L  Q  C  F  K  *  S  N  S  L  E  F  </second_frame>
            <third_frame>   S  F  Q  T  S  *  N  E  K  G  K  I  W  F  A  R  E  R  *  L  L  F  R  S  S  L  L  F  V  W  V  N  K  Q  T  K  F  T  A  S  *  W  L  F  L  L  P  D  I  M  C  *  F  A  V  F  S  C  T  S  *  N  N  L  I  *  V  T  V  H  Q  V  M  A  H  I  G  *  V  V  M  A  V  N  Q  I  E  K  R  S  I  N  *  K  N  G  V  L  A  *  N  E  M  D  W  I  N  S  V  M  *  H  L  P  M  P  F  F  I  L  S  F  L  *  L  F  L  T  L  H  L  Q  V  A  E  R  A  L  F  L  W  N  N  D  H  V  E  N  L  I  K  Q  N  H  R  V  I  L  P  I  I  F  P  S  L  E  K  N  A  R  G  H  W  N  Q  A  V  Q  N  L  T  L  N  V  R  K  I  F  S  D  I  D  S  E  L  F  E  E  C  L  Q  K  F  E  E  D  E  A  Q  E  E  E  V  K  R  K  R  E  I  T  W  K  R  L  E  E  L  A  G  V  K  A  A  S  N  E  P  V  L  V  S  H  K  I  T  P  H  P  P  S  G  *  R  L  Y  L  C  Y  C  C  F  S  L  D  Q  L  I  S  T  L  I  E  K  G  G  N  I  S  F  V  H  T  P  R  H  P  E  F  F  V  P  R  S  H  F  M  V  T  Q  I  K  L  D  T  K  S  V  L  I  *  R  Q  G  L  F  L  R  N  C  V  T  G  E  A  Q  D  F  I  V  C  C  P  C  V  A  R  V  H  L  V  F  A  L  L  E  F  L  T  M  R  L  *  K  R  H  T  *  G  I  R  L  K  F  L  L  G  C  C  A  *  I  S  V  H  R  Q  Y  I  C  F  D  I  A  A  W  H  E  S  I  P  V  D  N  L  E  N  V  Q  M  K  L  T  *  L  S  C  N  V  S  S  R  V  I  L  W  N  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53987" stop="53604"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>381</number_coding_nucleotides>
                  <number_encoded_amino_acids>127</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFLTLHLQVAERALFLWNNDHVENLIKQNHRVILPIIFPSLEKNARGHWNQAVQNLTLNVRKIFSDIDSELFEECLQKFEEDEAQEEEVKRKREITWKRLEELAGVKAASNEPVLVSHKITPHPPSG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53499" stop="53218"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFCSQVSLYGNTNQVGYQVSANIEARTVPTELRNWRSSRFYSLLSMRGSSSFGVCFVGVSNDEIIKASYLRYTSKVPFRVLRLNLCTPSIYML*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54252" stop="54055"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IYCILMAFPPAGYNVLVCCFQLYLMKQLDISNCTSSDGTYWLSCHGCESNRKTINQLKKWCACLK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="58648" e_stop="58543"/>
            <exon e_start="58459" e_stop="58298"/>
            <exon e_start="57904" e_stop="57538"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.821" acc_prob="0.993" e_score="0.991"/>
          <exon-intron don_prob="0.995" acc_prob="0.795" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="58648" e_stop="58543" e_length="106"/>
          </exon>
          <intron i_serial="1" don_prob="0.821" acc_prob="0.993">
            <gDNA_intron_boundary i_start="58542" i_stop="58460" i_length="83"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="58459" e_stop="58298" e_length="162"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.795">
            <gDNA_intron_boundary i_start="58297" i_stop="57905" i_length="393"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="57904" e_stop="57538" e_length="367"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58648" stop="58543"/>
              <exon start="58459" stop="58404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252118" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58609" stop="58543"/>
              <exon start="58459" stop="58298"/>
              <exon start="57904" stop="57538"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267089" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATCACACCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTAT : GGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAG : ATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGCGATGGAGGAAGCTCTGCATCACCGTCCAATGCTTCAACTGGTTCTAGAAGCAGTGATTTGTCTACTGCGCAGTCAGGAAATTCAAGTGCCACTACTGTTTCAGGAGTCACTTCTTCAACTCTGGGACCAAATCATGGAAATAGGCTACCGCAGGGGGCAAATGC</gDNA_template>
            <first_frame> H  H  T  H  F  P  I  F  P  Q  L  G  M  F  L  D  F  D  H  *  T  P  T  I  *  S  F  N  L  F  H  H  S  K  L   : W  M  L  S  G  F  F  R  T  S  F  A  Q  I  L  I  F  F  D  L  A  *  Q  A  R  V  S  V  D  L  S  K  K  T  R  T  K  V  Y  C  T  S  P  V  L  F  S  G  *  Q  L  A  W  I   : D  K  D  S  G  W  M  R  S  A  L  A  C  *  Q  F  I  L  L  L  R  P  F  R  L  M  K  V  L  F  *  G  C  L  N  Q  *  N  I  T  T  R  R  S  Y  F  Q  V  M  I  K  Q  I  L  N  R  L  P  R  K  P  S  K  S  A  E  N  R  D  G  G  S  S  A  S  P  S  N  A  S  T  G  S  R  S  S  D  L  S  T  A  Q  S  G  N  S  S  A  T  T  V  S  G  V  T  S  S  T  L  G  P  N  H  G  N  R  L  P  Q  G  A  N   </first_frame>
            <second_frame>  I  T  P  I  F  L  S  F  L  S  W  E  C  F  *  I  S  I  T  E  P  Q  L  S  K  V  S  I  F  F  I  T  Q  N  Y  :  G  C  Y  L  G  S  S  V  H  H  L  P  R  S  *  Y  S  L  T  *  L  N  R  P  E  S  L  W  T  S  A  K  K  Q  E  Q  R  F  T  A  P  P  R  F  F  F  L  V  D  S  *  H  G  *  :  I  R  I  R  G  G  *  D  L  H  W  L  A  N  N  S  F  C  C  L  D  L  S  D  *  *  K  F  C  F  E  G  V  *  I  S  K  T  L  R  P  E  D  H  I  F  K  *  *  S  N  R  Y  L  I  G  S  L  E  S  L  P  S  Q  Q  K  I  A  M  E  E  A  L  H  H  R  P  M  L  Q  L  V  L  E  A  V  I  C  L  L  R  S  Q  E  I  Q  V  P  L  L  F  Q  E  S  L  L  Q  L  W  D  Q  I  M  E  I  G  Y  R  R  G  Q  M  </second_frame>
            <third_frame>   S  H  P  F  S  Y  L  S  S  V  G  N  V  F  R  F  R  S  L  N  P  N  Y  L  K  F  Q  S  F  S  S  L  K  I  M :   D  V  I  W  V  L  P  Y  I  I  C  P  D  L  N  I  L  *  P  S  L  T  G  Q  S  L  C  G  P  Q  Q  K  N  K  N  K  G  L  L  H  L  P  G  S  F  F  W  L  T  A  S  M  D  R :   *  G  F  G  V  D  E  I  C  T  G  L  L  T  I  H  F  A  A  *  T  F  Q  I  D  E  S  S  V  L  R  V  F  K  S  V  K  H  Y  D  Q  K  I  I  F  S  S  D  D  Q  T  D  T  *  *  A  P  *  K  A  F  Q  V  S  R  K  S  R  W  R  K  L  C  I  T  V  Q  C  F  N  W  F  *  K  Q  *  F  V  Y  C  A  V  R  K  F  K  C  H  Y  C  F  R  S  H  F  F  N  S  G  T  K  S  W  K  *  A  T  A  G  G  K  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57794" stop="57540"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NITTRRSYFQVMIKQILNRLPRKPSKSAENRDGGSSASPSNASTGSRSSDLSTAQSGNSSATTVSGVTSSTLGPNHGNRLPQGAN</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57757" stop="57539"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNRYLIGSLESLPSQQKIAMEEALHHRPMLQLVLEAVICLLRSQEIQVPLLFQESLLQLWDQIMEIGYRRGQM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="58648" e_stop="58543"/>
            <exon e_start="58459" e_stop="58298"/>
            <exon e_start="57843" e_stop="57601"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.821" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="58648" e_stop="58543" e_length="106"/>
          </exon>
          <intron i_serial="1" don_prob="0.821" acc_prob="0.993">
            <gDNA_intron_boundary i_start="58542" i_stop="58460" i_length="83"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="58459" e_stop="58298" e_length="162"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.000">
            <gDNA_intron_boundary i_start="58297" i_stop="57844" i_length="454"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="57843" e_stop="57601" e_length="243"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58648" stop="58543"/>
              <exon start="58459" stop="58404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252118" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58641" stop="58543"/>
              <exon start="58459" stop="58298"/>
              <exon start="57843" stop="57601"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318044" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATCACACCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTAT : GGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAG : ACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGCGATGGAGGAAGCTCTGCATCACCGTCCAATGCTTCAACTGGTTCTAGAAGCAGTGATTTGTCTACTGCGCAGTCAGGAAATTCAAGTGCCACTACTGTTTC</gDNA_template>
            <first_frame> H  H  T  H  F  P  I  F  P  Q  L  G  M  F  L  D  F  D  H  *  T  P  T  I  *  S  F  N  L  F  H  H  S  K  L   : W  M  L  S  G  F  F  R  T  S  F  A  Q  I  L  I  F  F  D  L  A  *  Q  A  R  V  S  V  D  L  S  K  K  T  R  T  K  V  Y  C  T  S  P  V  L  F  S  G  *  Q  L  A  W  I   : D  L  S  D  *  *  K  F  C  F  E  G  V  *  I  S  K  T  L  R  P  E  D  H  I  F  K  *  *  S  N  R  Y  L  I  G  S  L  E  S  L  P  S  Q  Q  K  I  A  M  E  E  A  L  H  H  R  P  M  L  Q  L  V  L  E  A  V  I  C  L  L  R  S  Q  E  I  Q  V  P  L  L  F  </first_frame>
            <second_frame>  I  T  P  I  F  L  S  F  L  S  W  E  C  F  *  I  S  I  T  E  P  Q  L  S  K  V  S  I  F  F  I  T  Q  N  Y  :  G  C  Y  L  G  S  S  V  H  H  L  P  R  S  *  Y  S  L  T  *  L  N  R  P  E  S  L  W  T  S  A  K  K  Q  E  Q  R  F  T  A  P  P  R  F  F  F  L  V  D  S  *  H  G  *  :  T  F  Q  I  D  E  S  S  V  L  R  V  F  K  S  V  K  H  Y  D  Q  K  I  I  F  S  S  D  D  Q  T  D  T  *  *  A  P  *  K  A  F  Q  V  S  R  K  S  R  W  R  K  L  C  I  T  V  Q  C  F  N  W  F  *  K  Q  *  F  V  Y  C  A  V  R  K  F  K  C  H  Y  C  F </second_frame>
            <third_frame>   S  H  P  F  S  Y  L  S  S  V  G  N  V  F  R  F  R  S  L  N  P  N  Y  L  K  F  Q  S  F  S  S  L  K  I  M :   D  V  I  W  V  L  P  Y  I  I  C  P  D  L  N  I  L  *  P  S  L  T  G  Q  S  L  C  G  P  Q  Q  K  N  K  N  K  G  L  L  H  L  P  G  S  F  F  W  L  T  A  S  M  D  R :   P  F  R  L  M  K  V  L  F  *  G  C  L  N  Q  *  N  I  T  T  R  R  S  Y  F  Q  V  M  I  K  Q  I  L  N  R  L  P  R  K  P  S  K  S  A  E  N  R  D  G  G  S  S  A  S  P  S  N  A  S  T  G  S  R  S  S  D  L  S  T  A  Q  S  G  N  S  S  A  T  T  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57794" stop="57603"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NITTRRSYFQVMIKQILNRLPRKPSKSAENRDGGSSASPSNASTGSRSSDLSTAQSGNSSATTV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="58649" e_stop="58543"/>
            <exon e_start="58468" e_stop="58298"/>
            <exon e_start="57976" e_stop="57633"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.821" acc_prob="0.000" e_score="0.944"/>
          <exon-intron don_prob="0.995" acc_prob="0.992" e_score="0.895"/>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.944">
            <gDNA_exon_boundary e_start="58649" e_stop="58543" e_length="107"/>
          </exon>
          <intron i_serial="1" don_prob="0.821" acc_prob="0.000">
            <gDNA_intron_boundary i_start="58542" i_stop="58469" i_length="74"/>
          </intron>
          <exon e_serial="2" e_score="0.895">
            <gDNA_exon_boundary e_start="58468" e_stop="58298" e_length="171"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.992">
            <gDNA_intron_boundary i_start="58297" i_stop="57977" i_length="321"/>
          </intron>
          <exon e_serial="3" e_score="0.919">
            <gDNA_exon_boundary e_start="57976" e_stop="57633" e_length="344"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58649" stop="58543"/>
              <exon start="58468" stop="58298"/>
              <exon start="57976" stop="57633"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E481255" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58605" stop="58543"/>
              <exon start="58468" stop="58298"/>
              <exon start="57976" stop="57734"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438611" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCATCACACCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTAT : TCTTTGAAGGGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAG : ATGAAAAAGAGTTTTACTGGTCTAGACAGGTAGTCTGTGGTCTCATTTGTTTATTGGTTTAGGGGGTGGCAGATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTGTTTTGAGGGTGTTTAAATCAGTAAAACATTACGACCAGAAGATCATATTTTCAAGTGATGATCAAACAGATACTTAATAGGCTCCCTAGAAAGCCTTCCAAGTCAGCAGAAAATCGCGATGGAGGAAGCTCTGCATCACCGTCCAATGCTTCAACTGGTTCTAGAAGCAGTGATTTGTCTACTGCG</gDNA_template>
            <first_frame> P  S  H  P  F  S  Y  L  S  S  V  G  N  V  F  R  F  R  S  L  N  P  N  Y  L  K  F  Q  S  F  S  S  L  K  I  I :   L  *  R  D  V  I  W  V  L  P  Y  I  I  C  P  D  L  N  I  L  *  P  S  L  T  G  Q  S  L  C  G  P  Q  Q  K  N  K  N  K  G  L  L  H  L  P  G  S  F  F  W  L  T  A  S  M  D  R :   *  K  R  V  L  L  V  *  T  G  S  L  W  S  H  L  F  I  G  L  G  G  G  R  *  G  F  G  V  D  E  I  C  T  G  L  L  T  I  H  F  A  A  *  T  F  Q  I  D  E  S  S  V  L  R  V  F  K  S  V  K  H  Y  D  Q  K  I  I  F  S  S  D  D  Q  T  D  T  *  *  A  P  *  K  A  F  Q  V  S  R  K  S  R  W  R  K  L  C  I  T  V  Q  C  F  N  W  F  *  K  Q  *  F  V  Y  C  </first_frame>
            <second_frame>  H  H  T  H  F  P  I  F  P  Q  L  G  M  F  L  D  F  D  H  *  T  P  T  I  *  S  F  N  L  F  H  H  S  K  L   : F  F  E  G  M  L  S  G  F  F  R  T  S  F  A  Q  I  L  I  F  F  D  L  A  *  Q  A  R  V  S  V  D  L  S  K  K  T  R  T  K  V  Y  C  T  S  P  V  L  F  S  G  *  Q  L  A  W  I   : D  E  K  E  F  Y  W  S  R  Q  V  V  C  G  L  I  C  L  L  V  *  G  V  A  D  K  D  S  G  W  M  R  S  A  L  A  C  *  Q  F  I  L  L  L  R  P  F  R  L  M  K  V  L  F  *  G  C  L  N  Q  *  N  I  T  T  R  R  S  Y  F  Q  V  M  I  K  Q  I  L  N  R  L  P  R  K  P  S  K  S  A  E  N  R  D  G  G  S  S  A  S  P  S  N  A  S  T  G  S  R  S  S  D  L  S  T  A </second_frame>
            <third_frame>   I  T  P  I  F  L  S  F  L  S  W  E  C  F  *  I  S  I  T  E  P  Q  L  S  K  V  S  I  F  F  I  T  Q  N  Y  :  S  L  K  G  C  Y  L  G  S  S  V  H  H  L  P  R  S  *  Y  S  L  T  *  L  N  R  P  E  S  L  W  T  S  A  K  K  Q  E  Q  R  F  T  A  P  P  R  F  F  F  L  V  D  S  *  H  G  *  :  M  K  K  S  F  T  G  L  D  R  *  S  V  V  S  F  V  Y  W  F  R  G  W  Q  I  R  I  R  G  G  *  D  L  H  W  L  A  N  N  S  F  C  C  L  D  L  S  D  *  *  K  F  C  F  E  G  V  *  I  S  K  T  L  R  P  E  D  H  I  F  K  *  *  S  N  R  Y  L  I  G  S  L  E  S  L  P  S  Q  Q  K  I  A  M  E  E  A  L  H  H  R  P  M  L  Q  L  V  L  E  A  V  I  C  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0121H01.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="58719" e_stop="58543"/>
            <exon e_start="58459" e_stop="58002"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.821" acc_prob="0.993" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="58719" e_stop="58543" e_length="177"/>
          </exon>
          <intron i_serial="1" don_prob="0.821" acc_prob="0.993">
            <gDNA_intron_boundary i_start="58542" i_stop="58460" i_length="83"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="58459" e_stop="58002" e_length="458"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58719" stop="58543"/>
              <exon start="58459" stop="58002"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259209" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58719" stop="58543"/>
              <exon start="58459" stop="58002"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259192" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58648" stop="58543"/>
              <exon start="58459" stop="58404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252118" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATAATTGTAGCTAACCAAACACATCAAAAACAACAACCAGAGATTGGTTTTTGTCTATTTTTGTCTAATCCATCACACCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTAT : GGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAGGTAAGATTTTTCAGTTTCTGATTCAGATTATTTGATGCTTGTTTGATTATTAAAATAACTTTCTGCATCAGGGTTTCGCCTTTTGCACTGTTTAATTCACCAAGAATGCACCTTTTTTTAATTGCTAAGTGGAAGTGCACAGAGAACTCTCTTAGTGTGGAGTTGTTTATAATACAAATTACTTACTTTACCAAGTGAAAGAAAGAAAAGGGATTAGGTCACAAATGTTGATCTTTTTAGCTCTTTTCTCCATGATGAAAAAGAAGTTTGAACTTTTCTAGATTTCTTCATTTTAC</gDNA_template>
            <first_frame> N  N  C  S  *  P  N  T  S  K  T  T  T  R  D  W  F  L  S  I  F  V  *  S  I  T  P  I  F  L  S  F  L  S  W  E  C  F  *  I  S  I  T  E  P  Q  L  S  K  V  S  I  F  F  I  T  Q  N  Y  :  G  C  Y  L  G  S  S  V  H  H  L  P  R  S  *  Y  S  L  T  *  L  N  R  P  E  S  L  W  T  S  A  K  K  Q  E  Q  R  F  T  A  P  P  R  F  F  F  L  V  D  S  *  H  G  *  V  R  F  F  S  F  *  F  R  L  F  D  A  C  L  I  I  K  I  T  F  C  I  R  V  S  P  F  A  L  F  N  S  P  R  M  H  L  F  L  I  A  K  W  K  C  T  E  N  S  L  S  V  E  L  F  I  I  Q  I  T  Y  F  T  K  *  K  K  E  K  G  L  G  H  K  C  *  S  F  *  L  F  S  P  *  *  K  R  S  L  N  F  S  R  F  L  H  F   </first_frame>
            <second_frame>  I  I  V  A  N  Q  T  H  Q  K  Q  Q  P  E  I  G  F  C  L  F  L  S  N  P  S  H  P  F  S  Y  L  S  S  V  G  N  V  F  R  F  R  S  L  N  P  N  Y  L  K  F  Q  S  F  S  S  L  K  I  M :   D  V  I  W  V  L  P  Y  I  I  C  P  D  L  N  I  L  *  P  S  L  T  G  Q  S  L  C  G  P  Q  Q  K  N  K  N  K  G  L  L  H  L  P  G  S  F  F  W  L  T  A  S  M  D  R  *  D  F  S  V  S  D  S  D  Y  L  M  L  V  *  L  L  K  *  L  S  A  S  G  F  R  L  L  H  C  L  I  H  Q  E  C  T  F  F  *  L  L  S  G  S  A  Q  R  T  L  L  V  W  S  C  L  *  Y  K  L  L  T  L  P  S  E  R  K  K  R  D  *  V  T  N  V  D  L  F  S  S  F  L  H  D  E  K  E  V  *  T  F  L  D  F  F  I  L  </second_frame>
            <third_frame>   *  L  *  L  T  K  H  I  K  N  N  N  Q  R  L  V  F  V  Y  F  C  L  I  H  H  T  H  F  P  I  F  P  Q  L  G  M  F  L  D  F  D  H  *  T  P  T  I  *  S  F  N  L  F  H  H  S  K  L   : W  M  L  S  G  F  F  R  T  S  F  A  Q  I  L  I  F  F  D  L  A  *  Q  A  R  V  S  V  D  L  S  K  K  T  R  T  K  V  Y  C  T  S  P  V  L  F  S  G  *  Q  L  A  W  I  G  K  I  F  Q  F  L  I  Q  I  I  *  C  L  F  D  Y  *  N  N  F  L  H  Q  G  F  A  F  C  T  V  *  F  T  K  N  A  P  F  F  N  C  *  V  E  V  H  R  E  L  S  *  C  G  V  V  Y  N  T  N  Y  L  L  Y  Q  V  K  E  R  K  G  I  R  S  Q  M  L  I  F  L  A  L  F  S  M  M  K  K  K  F  E  L  F  *  I  S  S  F  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58718" stop="58543"/>
                    <exon start="58459" stop="58405"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IIVANQTHQKQQPEIGFCLFLSNPSHPFSYLSSVGNVFRFRSLNPNYLKFQSFSSLKIMDVIWVLPYIICPDLNIL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="58727" e_stop="58543"/>
            <exon e_start="58459" e_stop="58298"/>
            <exon e_start="57914" e_stop="57819"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.821" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="58727" e_stop="58543" e_length="185"/>
          </exon>
          <intron i_serial="1" don_prob="0.821" acc_prob="0.993">
            <gDNA_intron_boundary i_start="58542" i_stop="58460" i_length="83"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="58459" e_stop="58298" e_length="162"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="58297" i_stop="57915" i_length="383"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="57914" e_stop="57819" e_length="96"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58727" stop="58543"/>
              <exon start="58459" stop="58298"/>
              <exon start="57914" stop="57819"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296941" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58648" stop="58543"/>
              <exon start="58459" stop="58404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252118" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="7" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAGAAGAATAATTGTAGCTAACCAAACACATCAAAAACAACAACCAGAGATTGGTTTTTGTCTATTTTTGTCTAATCCATCACACCCATTTTCCTATCTTTCCTCAGTTGGGAATGTTTTTAGATTTCGATCACTGAACCCCAACTATCTAAAGTTTCAATCTTTTTCATCACTCAAAATTAT : GGATGTTATCTGGGTTCTTCCGTACATCATTTGCCCAGATCTTAATATTCTTTGACCTAGCTTAACAGGCCAGAGTCTCTGTGGACCTCAGCAAAAAAACAAGAACAAAGGTTTACTGCACCTCCCCGGTTCTTTTTTCTGGTTGACAGCTAGCATGGATAG : GGGGTGGCAGATAAGGATTCGGGGTGGATGAGATCTGCACTGGCTTGCTAACAATTCATTTTGCTGCTTAGACCTTTCAGATTGATGAAAGTTCTG</gDNA_template>
            <first_frame> K  R  R  I  I  V  A  N  Q  T  H  Q  K  Q  Q  P  E  I  G  F  C  L  F  L  S  N  P  S  H  P  F  S  Y  L  S  S  V  G  N  V  F  R  F  R  S  L  N  P  N  Y  L  K  F  Q  S  F  S  S  L  K  I  M :   D  V  I  W  V  L  P  Y  I  I  C  P  D  L  N  I  L  *  P  S  L  T  G  Q  S  L  C  G  P  Q  Q  K  N  K  N  K  G  L  L  H  L  P  G  S  F  F  W  L  T  A  S  M  D  R :   G  W  Q  I  R  I  R  G  G  *  D  L  H  W  L  A  N  N  S  F  C  C  L  D  L  S  D  *  *  K  F   </first_frame>
            <second_frame>  K  E  E  *  L  *  L  T  K  H  I  K  N  N  N  Q  R  L  V  F  V  Y  F  C  L  I  H  H  T  H  F  P  I  F  P  Q  L  G  M  F  L  D  F  D  H  *  T  P  T  I  *  S  F  N  L  F  H  H  S  K  L   : W  M  L  S  G  F  F  R  T  S  F  A  Q  I  L  I  F  F  D  L  A  *  Q  A  R  V  S  V  D  L  S  K  K  T  R  T  K  V  Y  C  T  S  P  V  L  F  S  G  *  Q  L  A  W  I   : G  G  G  R  *  G  F  G  V  D  E  I  C  T  G  L  L  T  I  H  F  A  A  *  T  F  Q  I  D  E  S  S  </second_frame>
            <third_frame>   K  K  N  N  C  S  *  P  N  T  S  K  T  T  T  R  D  W  F  L  S  I  F  V  *  S  I  T  P  I  F  L  S  F  L  S  W  E  C  F  *  I  S  I  T  E  P  Q  L  S  K  V  S  I  F  F  I  T  Q  N  Y  :  G  C  Y  L  G  S  S  V  H  H  L  P  R  S  *  Y  S  L  T  *  L  N  R  P  E  S  L  W  T  S  A  K  K  Q  E  Q  R  F  T  A  P  P  R  F  F  F  L  V  D  S  *  H  G  *  :  G  V  A  D  K  D  S  G  W  M  R  S  A  L  A  C  *  Q  F  I  L  L  L  R  P  F  R  L  M  K  V  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58727" stop="58543"/>
                    <exon start="58459" stop="58405"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KRRIIVANQTHQKQQPEIGFCLFLSNPSHPFSYLSSVGNVFRFRSLNPNYLKFQSFSSLKIMDVIWVLPYIICPDLNIL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="66308" PGL_stop="60352"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66308" e_stop="66038"/>
            <exon e_start="65916" e_stop="65860"/>
            <exon e_start="65668" e_stop="65574"/>
            <exon e_start="64969" e_stop="64819"/>
            <exon e_start="64506" e_stop="64381"/>
            <exon e_start="64265" e_stop="64109"/>
            <exon e_start="63949" e_stop="63889"/>
            <exon e_start="63807" e_stop="63525"/>
            <exon e_start="63124" e_stop="62999"/>
            <exon e_start="62704" e_stop="62549"/>
            <exon e_start="62464" e_stop="62218"/>
            <exon e_start="62140" e_stop="61679"/>
            <exon e_start="61008" e_stop="60352"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.700" acc_prob="0.990" e_score="0.996"/>
          <exon-intron don_prob="0.952" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.915" acc_prob="0.950" e_score="1.000"/>
          <exon-intron don_prob="0.950" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.834" acc_prob="0.985" e_score="0.992"/>
          <exon-intron don_prob="0.979" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.932" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="1.000" e_score="0.996"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.943" acc_prob="0.999" e_score="0.994"/>
          <exon-intron don_prob="0.988" acc_prob="1.000" e_score="0.996"/>
          <exon-intron don_prob="0.979" acc_prob="0.699" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="66308" e_stop="66038" e_length="271"/>
          </exon>
          <intron i_serial="1" don_prob="0.700" acc_prob="0.990">
            <gDNA_intron_boundary i_start="66037" i_stop="65917" i_length="121"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="65916" e_stop="65860" e_length="57"/>
          </exon>
          <intron i_serial="2" don_prob="0.952" acc_prob="0.997">
            <gDNA_intron_boundary i_start="65859" i_stop="65669" i_length="191"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="65668" e_stop="65574" e_length="95"/>
          </exon>
          <intron i_serial="3" don_prob="0.915" acc_prob="0.950">
            <gDNA_intron_boundary i_start="65573" i_stop="64970" i_length="604"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="64969" e_stop="64819" e_length="151"/>
          </exon>
          <intron i_serial="4" don_prob="0.950" acc_prob="0.998">
            <gDNA_intron_boundary i_start="64818" i_stop="64507" i_length="312"/>
          </intron>
          <exon e_serial="5" e_score="0.992">
            <gDNA_exon_boundary e_start="64506" e_stop="64381" e_length="126"/>
          </exon>
          <intron i_serial="5" don_prob="0.834" acc_prob="0.985">
            <gDNA_intron_boundary i_start="64380" i_stop="64266" i_length="115"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="64265" e_stop="64109" e_length="157"/>
          </exon>
          <intron i_serial="6" don_prob="0.979" acc_prob="0.995">
            <gDNA_intron_boundary i_start="64108" i_stop="63950" i_length="159"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="63949" e_stop="63889" e_length="61"/>
          </exon>
          <intron i_serial="7" don_prob="0.989" acc_prob="0.932">
            <gDNA_intron_boundary i_start="63888" i_stop="63808" i_length="81"/>
          </intron>
          <exon e_serial="8" e_score="0.996">
            <gDNA_exon_boundary e_start="63807" e_stop="63525" e_length="283"/>
          </exon>
          <intron i_serial="8" don_prob="0.959" acc_prob="1.000">
            <gDNA_intron_boundary i_start="63524" i_stop="63125" i_length="400"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="63124" e_stop="62999" e_length="126"/>
          </exon>
          <intron i_serial="9" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="62998" i_stop="62705" i_length="294"/>
          </intron>
          <exon e_serial="10" e_score="0.994">
            <gDNA_exon_boundary e_start="62704" e_stop="62549" e_length="156"/>
          </exon>
          <intron i_serial="10" don_prob="0.943" acc_prob="0.999">
            <gDNA_intron_boundary i_start="62548" i_stop="62465" i_length="84"/>
          </intron>
          <exon e_serial="11" e_score="0.996">
            <gDNA_exon_boundary e_start="62464" e_stop="62218" e_length="247"/>
          </exon>
          <intron i_serial="11" don_prob="0.988" acc_prob="1.000">
            <gDNA_intron_boundary i_start="62217" i_stop="62141" i_length="77"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="62140" e_stop="61679" e_length="462"/>
          </exon>
          <intron i_serial="12" don_prob="0.979" acc_prob="0.699">
            <gDNA_intron_boundary i_start="61678" i_stop="61009" i_length="670"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="61008" e_stop="60352" e_length="657"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66308" stop="66038"/>
              <exon start="65916" stop="65860"/>
              <exon start="65668" stop="65574"/>
              <exon start="64969" stop="64819"/>
              <exon start="64506" stop="64381"/>
              <exon start="64265" stop="64109"/>
              <exon start="63949" stop="63889"/>
              <exon start="63807" stop="63525"/>
              <exon start="63124" stop="62999"/>
              <exon start="62704" stop="62549"/>
              <exon start="62464" stop="62218"/>
              <exon start="62140" stop="61679"/>
              <exon start="61008" stop="60352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745535" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66225" stop="66038"/>
              <exon start="65916" stop="65860"/>
              <exon start="65668" stop="65574"/>
              <exon start="64969" stop="64875"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E722301" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63042" stop="62999"/>
              <exon start="62704" stop="62549"/>
              <exon start="62464" stop="62218"/>
              <exon start="62140" stop="62007"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E470347" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62293" stop="62218"/>
              <exon start="62140" stop="61679"/>
              <exon start="61008" stop="60879"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202312" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62092" stop="61679"/>
              <exon start="61008" stop="60818"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474084" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61892" stop="61679"/>
              <exon start="61008" stop="60564"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604031" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGAGACGGAGAGTTGAAGCAAAATTGAGTGAGGAAATAGCCAAAGAAAGAGTGGAATGACGATGGACCGAGAGAAGGAGAGAGAGGTTGAGTTGGAAAGTGCAATGTACACCAACTGTTTGTTACTAGGGTTGGATCCATCCATCATCGGAATCGGAGCCGGAAACGGCACACCTCGCGTCGGACTTTTTCGTCATTCGAACCCTAAATTGGGCGAACAGCTTCTCTACTTTATATTATCTTCTCTCAGAGGTCCTACTCAATCCGCTAAG : GATTTCGATAAGGTCTGGCCAATTTTTGATTCCGCACAATCTCGCGATTTTCGTAAG : GTTGTACAAGGGATTATAAGTGAGCTGGAATCTCAAGGGGCACTGCCTAGAAGTAATTCGAGGGTCTCATCTCTTGCCACATGCTGTGGACCAAG : ATTTGTTGAACTTCTATGGCAACTTTCATTGCATGCTTTGAGGGAGGTTCATAGGCGAATGTTTGCTGCTGATGTTGTTTCTAACCCCTTGCCTGCATCATTAACAGATGTAGCTTTCTCACATGCAGCCACACTACTTCCTGTAACCAAG : GCTAGGATTGCTCTTGAAAGAAGGAGGTTTTTGAGTAATGCAGAAACAGCAGTTCGTAGACAGGCCATGTGGTCTAATTTGGCTCATGAATTGACAGCTGAATTTCGAGGCCTTTGTGCTGAAGAG : GCTTATTTGCAGCAAGAACTGGAAAAGCTGCAGGATGTGAGAAATAAAGTAAAGCTGGAAGGTGAACTGTGGGATGAACTTGTATCAAGCTCAAGTCAGAACTCACACATGGTTCAAAGAGCTACTCGTTTGTGGGACTCTTTGCTGTCTCGCAAGA : ATCAACATGAAATTCTCGCCTCTGGCCCGATAGAAGATCTTATTGCTCATCGTGAGCATAG : GTATCGCATCTCTGGTTCAGCTTTGCTCACTGCTATGGATCAAAGCCCTGTAGCTCCACCACCCCATTTGGCGTCTTCACATCAAGCTGTAAGATCACAAGCAGACGTGGATAGAGAAAAGCATGCAAGGAGTTCAGATTCTTCTCATATTCAAGTAGACGATAACACATTTTCTCGAGTTGATGAGAGAGTTGCTAGAGGCCATCCTACTGTTGATATAGCAGAAGTTTTGAGGCGTTGGACACATGCCCTACAACGTGTTCATAAGCAATCCCTTCAACTG : GCAAAAGCAAATGATGGAGAGGGTCCAGAGCTTTTGAGGAGTTCACATGATGGTGGTACTGGTGGTCATGCAGAGTCCTTGGCTGCAACCCTTGCCGAACATAAGCAGCACCTAGCAAGTATACAG : GTGCTCATAAATCAACTGAAGGAAGTCGCTCCATCCATACAGAATTCAATTTTAGAACTTACAGAAGAAGTTAGTAGTATTTCGTCCAATTCTTCTAGAACAGCCAATTTTCAGGGCAGATCACATTCCCAAGCACAGAGCAGTGGGAGAACATTG : GAACACAGGGATGATGAGGTAGCTGAGATGAGCTCAAGATTGTCATCCATGCAATTTGAAAAGACATCAGCTAGTCCCACTACTTTGAAGCTCCCACCTTTGTTTAGTGTGACGCCGAATTCTTTAGGAAAAGGTGGTGCACAGAAGCAACAGATCTCTTCCCAAACCAGCCAAATTGAAATTATGCCTGAGAGGAAGTCTCTGGATCAGCAATTTCTAAATAATTCCTTCGATAATTCGCCACAAG : ATAATGACACAAGCTTTGTTCAAAATCTGAAGAGATCTGTCAGAGAAGCTGCACTTCGCTCCGAATCTTACTATCAGGGATCATCTCAAGATAGTCGTTCTGATGATAGTTCTGAGCACTACTTTGAGCCTGTCTCAGGGTTAGGGTTTTCTCAGCATGGAGATAGGGCAAACTTGCTGAGAAGAAAAAAATTGTTTGTGTCAGAACCAGATTCTTCATTTTTAGGGACTGGTGCACCGGATAGTCATATGAACATCAAGTCTGATGGAATACCTGACTTATTACATGATCTGCAGTCTGTGGATGACTATGATGGTTTTCTTTCAACTATGGGTTCAAACTCTTCATTTTCGGATGCACATAGGTCATTTTATGATTTGGAGGAAGCTAAGGATCAAGTATTTTCTCCTCCTCTGCTTATGGATGCATCATTGTTGGCAGATTCATATGAGGATTTACTTG : CACCATTGTCAGAAACTGAAACTGCTTTGATGGAGCATTGAGATAAAACATTGGGTTATGTTGCTGCTCGGCTTTGAAGAGATTGCATGGAAGCTTGTACTGCCAGCCTTTCTGTTGTTGGAATACCCTCCTCATATTAACTTCCGTTTGATTGTGTGATTTCTTGTATTTTTCATGCTTCCAAGTGTCTCAGCCTTTATCTTTTGCATTTCATTTGACTGGGAAGAGCAGAGAGAGCTGATCGCACATTGCTCGGTAAGTGTGACCATGGCCGAGCCAAGATTTTGATGTGCTTACCCTGGTCCTGTCAATGTGAGCTTGTTCTTCTGCAGGAGACCGGCAGGACTGCTTCAGACAGTTGTGCGCTGTATACTGCTGGGTAAAGAAATTTTATCTTGCTCCCCATTGATTTTTTTTTGTTTACTCTGTAACAATTCAATCTAAGGGGAGCCTCAGAGTAACGGTATAGTTGGTTCCATGCTGGTTCGAGCCCATTGATGGTTGCATCAGGATAGGTCGCACACATTATATTCCCTTGGATCCCCAAGTCCCGTGTGATCACCGAATGTGTTATATACTGTGCTGTCCTTTCTTCTGTAACAATTCAATGGATACGGTCGAAGAAGTAATTTATCTGTTCGTTTGTTCTATAATATG</gDNA_template>
            <first_frame> R  D  G  E  L  K  Q  N  *  V  R  K  *  P  K  K  E  W  N  D  D  G  P  R  E  G  E  R  G  *  V  G  K  C  N  V  H  Q  L  F  V  T  R  V  G  S  I  H  H  R  N  R  S  R  K  R  H  T  S  R  R  T  F  S  S  F  E  P  *  I  G  R  T  A  S  L  L  Y  I  I  F  S  Q  R  S  Y  S  I  R  *   : G  F  R  *  G  L  A  N  F  *  F  R  T  I  S  R  F  S  *   : G  C  T  R  D  Y  K  *  A  G  I  S  R  G  T  A  *  K  *  F  E  G  L  I  S  C  H  M  L  W  T  K  :  I  C  *  T  S  M  A  T  F  I  A  C  F  E  G  G  S  *  A  N  V  C  C  *  C  C  F  *  P  L  A  C  I  I  N  R  C  S  F  L  T  C  S  H  T  T  S  C  N  Q   : G  *  D  C  S  *  K  K  E  V  F  E  *  C  R  N  S  S  S  *  T  G  H  V  V  *  F  G  S  *  I  D  S  *  I  S  R  P  L  C  *  R   : G  L  F  A  A  R  T  G  K  A  A  G  C  E  K  *  S  K  A  G  R  *  T  V  G  *  T  C  I  K  L  K  S  E  L  T  H  G  S  K  S  Y  S  F  V  G  L  F  A  V  S  Q  E :   S  T  *  N  S  R  L  W  P  D  R  R  S  Y  C  S  S  *  A  *  :  V  S  H  L  W  F  S  F  A  H  C  Y  G  S  K  P  C  S  S  T  T  P  F  G  V  F  T  S  S  C  K  I  T  S  R  R  G  *  R  K  A  C  K  E  F  R  F  F  S  Y  S  S  R  R  *  H  I  F  S  S  *  *  E  S  C  *  R  P  S  Y  C  *  Y  S  R  S  F  E  A  L  D  T  C  P  T  T  C  S  *  A  I  P  S  T   : G  K  S  K  *  W  R  G  S  R  A  F  E  E  F  T  *  W  W  Y  W  W  S  C  R  V  L  G  C  N  P  C  R  T  *  A  A  P  S  K  Y  T   : G  A  H  K  S  T  E  G  S  R  S  I  H  T  E  F  N  F  R  T  Y  R  R  S  *  *  Y  F  V  Q  F  F  *  N  S  Q  F  S  G  Q  I  T  F  P  S  T  E  Q  W  E  N  I   : G  T  Q  G  *  *  G  S  *  D  E  L  K  I  V  I  H  A  I  *  K  D  I  S  *  S  H  Y  F  E  A  P  T  F  V  *  C  D  A  E  F  F  R  K  R  W  C  T  E  A  T  D  L  F  P  N  Q  P  N  *  N  Y  A  *  E  E  V  S  G  S  A  I  S  K  *  F  L  R  *  F  A  T  R :   *  *  H  K  L  C  S  K  S  E  E  I  C  Q  R  S  C  T  S  L  R  I  L  L  S  G  I  I  S  R  *  S  F  *  *  *  F  *  A  L  L  *  A  C  L  R  V  R  V  F  S  A  W  R  *  G  K  L  A  E  K  K  K  I  V  C  V  R  T  R  F  F  I  F  R  D  W  C  T  G  *  S  Y  E  H  Q  V  *  W  N  T  *  L  I  T  *  S  A  V  C  G  *  L  *  W  F  S  F  N  Y  G  F  K  L  F  I  F  G  C  T  *  V  I  L  *  F  G  G  S  *  G  S  S  I  F  S  S  S  A  Y  G  C  I  I  V  G  R  F  I  *  G  F  T  C :   T  I  V  R  N  *  N  C  F  D  G  A  L  R  *  N  I  G  L  C  C  C  S  A  L  K  R  L  H  G  S  L  Y  C  Q  P  F  C  C  W  N  T  L  L  I  L  T  S  V  *  L  C  D  F  L  Y  F  S  C  F  Q  V  S  Q  P  L  S  F  A  F  H  L  T  G  K  S  R  E  S  *  S  H  I  A  R  *  V  *  P  W  P  S  Q  D  F  D  V  L  T  L  V  L  S  M  *  A  C  S  S  A  G  D  R  Q  D  C  F  R  Q  L  C  A  V  Y  C  W  V  K  K  F  Y  L  A  P  H  *  F  F  F  V  Y  S  V  T  I  Q  S  K  G  S  L  R  V  T  V  *  L  V  P  C  W  F  E  P  I  D  G  C  I  R  I  G  R  T  H  Y  I  P  L  D  P  Q  V  P  C  D  H  R  M  C  Y  I  L  C  C  P  F  F  C  N  N  S  M  D  T  V  E  E  V  I  Y  L  F  V  C  S  I  I   </first_frame>
            <second_frame>  E  T  E  S  *  S  K  I  E  *  G  N  S  Q  R  K  S  G  M  T  M  D  R  E  K  E  R  E  V  E  L  E  S  A  M  Y  T  N  C  L  L  L  G  L  D  P  S  I  I  G  I  G  A  G  N  G  T  P  R  V  G  L  F  R  H  S  N  P  K  L  G  E  Q  L  L  Y  F  I  L  S  S  L  R  G  P  T  Q  S  A  K  :  D  F  D  K  V  W  P  I  F  D  S  A  Q  S  R  D  F  R  K  :  V  V  Q  G  I  I  S  E  L  E  S  Q  G  A  L  P  R  S  N  S  R  V  S  S  L  A  T  C  C  G  P  R :   F  V  E  L  L  W  Q  L  S  L  H  A  L  R  E  V  H  R  R  M  F  A  A  D  V  V  S  N  P  L  P  A  S  L  T  D  V  A  F  S  H  A  A  T  L  L  P  V  T  K  :  A  R  I  A  L  E  R  R  R  F  L  S  N  A  E  T  A  V  R  R  Q  A  M  W  S  N  L  A  H  E  L  T  A  E  F  R  G  L  C  A  E  E  :  A  Y  L  Q  Q  E  L  E  K  L  Q  D  V  R  N  K  V  K  L  E  G  E  L  W  D  E  L  V  S  S  S  S  Q  N  S  H  M  V  Q  R  A  T  R  L  W  D  S  L  L  S  R  K   : N  Q  H  E  I  L  A  S  G  P  I  E  D  L  I  A  H  R  E  H  R :   Y  R  I  S  G  S  A  L  L  T  A  M  D  Q  S  P  V  A  P  P  P  H  L  A  S  S  H  Q  A  V  R  S  Q  A  D  V  D  R  E  K  H  A  R  S  S  D  S  S  H  I  Q  V  D  D  N  T  F  S  R  V  D  E  R  V  A  R  G  H  P  T  V  D  I  A  E  V  L  R  R  W  T  H  A  L  Q  R  V  H  K  Q  S  L  Q  L  :  A  K  A  N  D  G  E  G  P  E  L  L  R  S  S  H  D  G  G  T  G  G  H  A  E  S  L  A  A  T  L  A  E  H  K  Q  H  L  A  S  I  Q  :  V  L  I  N  Q  L  K  E  V  A  P  S  I  Q  N  S  I  L  E  L  T  E  E  V  S  S  I  S  S  N  S  S  R  T  A  N  F  Q  G  R  S  H  S  Q  A  Q  S  S  G  R  T  L  :  E  H  R  D  D  E  V  A  E  M  S  S  R  L  S  S  M  Q  F  E  K  T  S  A  S  P  T  T  L  K  L  P  P  L  F  S  V  T  P  N  S  L  G  K  G  G  A  Q  K  Q  Q  I  S  S  Q  T  S  Q  I  E  I  M  P  E  R  K  S  L  D  Q  Q  F  L  N  N  S  F  D  N  S  P  Q   : D  N  D  T  S  F  V  Q  N  L  K  R  S  V  R  E  A  A  L  R  S  E  S  Y  Y  Q  G  S  S  Q  D  S  R  S  D  D  S  S  E  H  Y  F  E  P  V  S  G  L  G  F  S  Q  H  G  D  R  A  N  L  L  R  R  K  K  L  F  V  S  E  P  D  S  S  F  L  G  T  G  A  P  D  S  H  M  N  I  K  S  D  G  I  P  D  L  L  H  D  L  Q  S  V  D  D  Y  D  G  F  L  S  T  M  G  S  N  S  S  F  S  D  A  H  R  S  F  Y  D  L  E  E  A  K  D  Q  V  F  S  P  P  L  L  M  D  A  S  L  L  A  D  S  Y  E  D  L  L   : A  P  L  S  E  T  E  T  A  L  M  E  H  *  D  K  T  L  G  Y  V  A  A  R  L  *  R  D  C  M  E  A  C  T  A  S  L  S  V  V  G  I  P  S  S  Y  *  L  P  F  D  C  V  I  S  C  I  F  H  A  S  K  C  L  S  L  Y  L  L  H  F  I  *  L  G  R  A  E  R  A  D  R  T  L  L  G  K  C  D  H  G  R  A  K  I  L  M  C  L  P  W  S  C  Q  C  E  L  V  L  L  Q  E  T  G  R  T  A  S  D  S  C  A  L  Y  T  A  G  *  R  N  F  I  L  L  P  I  D  F  F  L  F  T  L  *  Q  F  N  L  R  G  A  S  E  *  R  Y  S  W  F  H  A  G  S  S  P  L  M  V  A  S  G  *  V  A  H  I  I  F  P  W  I  P  K  S  R  V  I  T  E  C  V  I  Y  C  A  V  L  S  S  V  T  I  Q  W  I  R  S  K  K  *  F  I  C  S  F  V  L  *  Y  </second_frame>
            <third_frame>   R  R  R  V  E  A  K  L  S  E  E  I  A  K  E  R  V  E  *  R  W  T  E  R  R  R  E  R  L  S  W  K  V  Q  C  T  P  T  V  C  Y  *  G  W  I  H  P  S  S  E  S  E  P  E  T  A  H  L  A  S  D  F  F  V  I  R  T  L  N  W  A  N  S  F  S  T  L  Y  Y  L  L  S  E  V  L  L  N  P  L  R :   I  S  I  R  S  G  Q  F  L  I  P  H  N  L  A  I  F  V  R :   L  Y  K  G  L  *  V  S  W  N  L  K  G  H  C  L  E  V  I  R  G  S  H  L  L  P  H  A  V  D  Q   : D  L  L  N  F  Y  G  N  F  H  C  M  L  *  G  R  F  I  G  E  C  L  L  L  M  L  F  L  T  P  C  L  H  H  *  Q  M  *  L  S  H  M  Q  P  H  Y  F  L  *  P  R :   L  G  L  L  L  K  E  G  G  F  *  V  M  Q  K  Q  Q  F  V  D  R  P  C  G  L  I  W  L  M  N  *  Q  L  N  F  E  A  F  V  L  K  R :   L  I  C  S  K  N  W  K  S  C  R  M  *  E  I  K  *  S  W  K  V  N  C  G  M  N  L  Y  Q  A  Q  V  R  T  H  T  W  F  K  E  L  L  V  C  G  T  L  C  C  L  A  R  :  I  N  M  K  F  S  P  L  A  R  *  K  I  L  L  L  I  V  S  I   : G  I  A  S  L  V  Q  L  C  S  L  L  W  I  K  A  L  *  L  H  H  P  I  W  R  L  H  I  K  L  *  D  H  K  Q  T  W  I  E  K  S  M  Q  G  V  Q  I  L  L  I  F  K  *  T  I  T  H  F  L  E  L  M  R  E  L  L  E  A  I  L  L  L  I  *  Q  K  F  *  G  V  G  H  M  P  Y  N  V  F  I  S  N  P  F  N  W :   Q  K  Q  M  M  E  R  V  Q  S  F  *  G  V  H  M  M  V  V  L  V  V  M  Q  S  P  W  L  Q  P  L  P  N  I  S  S  T  *  Q  V  Y  R :   C  S  *  I  N  *  R  K  S  L  H  P  Y  R  I  Q  F  *  N  L  Q  K  K  L  V  V  F  R  P  I  L  L  E  Q  P  I  F  R  A  D  H  I  P  K  H  R  A  V  G  E  H  W :   N  T  G  M  M  R  *  L  R  *  A  Q  D  C  H  P  C  N  L  K  R  H  Q  L  V  P  L  L  *  S  S  H  L  C  L  V  *  R  R  I  L  *  E  K  V  V  H  R  S  N  R  S  L  P  K  P  A  K  L  K  L  C  L  R  G  S  L  W  I  S  N  F  *  I  I  P  S  I  I  R  H  K  :  I  M  T  Q  A  L  F  K  I  *  R  D  L  S  E  K  L  H  F  A  P  N  L  T  I  R  D  H  L  K  I  V  V  L  M  I  V  L  S  T  T  L  S  L  S  Q  G  *  G  F  L  S  M  E  I  G  Q  T  C  *  E  E  K  N  C  L  C  Q  N  Q  I  L  H  F  *  G  L  V  H  R  I  V  I  *  T  S  S  L  M  E  Y  L  T  Y  Y  M  I  C  S  L  W  M  T  M  M  V  F  F  Q  L  W  V  Q  T  L  H  F  R  M  H  I  G  H  F  M  I  W  R  K  L  R  I  K  Y  F  L  L  L  C  L  W  M  H  H  C  W  Q  I  H  M  R  I  Y  L  :  H  H  C  Q  K  L  K  L  L  *  W  S  I  E  I  K  H  W  V  M  L  L  L  G  F  E  E  I  A  W  K  L  V  L  P  A  F  L  L  L  E  Y  P  P  H  I  N  F  R  L  I  V  *  F  L  V  F  F  M  L  P  S  V  S  A  F  I  F  C  I  S  F  D  W  E  E  Q  R  E  L  I  A  H  C  S  V  S  V  T  M  A  E  P  R  F  *  C  A  Y  P  G  P  V  N  V  S  L  F  F  C  R  R  P  A  G  L  L  Q  T  V  V  R  C  I  L  L  G  K  E  I  L  S  C  S  P  L  I  F  F  C  L  L  C  N  N  S  I  *  G  E  P  Q  S  N  G  I  V  G  S  M  L  V  R  A  H  *  W  L  H  Q  D  R  S  H  T  L  Y  S  L  G  S  P  S  P  V  *  S  P  N  V  L  Y  T  V  L  S  F  L  L  *  Q  F  N  G  Y  G  R  R  S  N  L  S  V  R  L  F  Y  N  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66277" stop="66038"/>
                    <exon start="65916" stop="65860"/>
                    <exon start="65668" stop="65574"/>
                    <exon start="64969" stop="64819"/>
                    <exon start="64506" stop="64381"/>
                    <exon start="64265" stop="64109"/>
                    <exon start="63949" stop="63889"/>
                    <exon start="63807" stop="63525"/>
                    <exon start="63124" stop="62999"/>
                    <exon start="62704" stop="62549"/>
                    <exon start="62464" stop="62218"/>
                    <exon start="62140" stop="61679"/>
                    <exon start="61008" stop="60968"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>2199</number_coding_nucleotides>
                  <number_encoded_amino_acids>733</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GNSQRKSGMTMDREKEREVELESAMYTNCLLLGLDPSIIGIGAGNGTPRVGLFRHSNPKLGEQLLYFILSSLRGPTQSAKDFDKVWPIFDSAQSRDFRKVVQGIISELESQGALPRSNSRVSSLATCCGPRFVELLWQLSLHALREVHRRMFAADVVSNPLPASLTDVAFSHAATLLPVTKARIALERRRFLSNAETAVRRQAMWSNLAHELTAEFRGLCAEEAYLQQELEKLQDVRNKVKLEGELWDELVSSSSQNSHMVQRATRLWDSLLSRKNQHEILASGPIEDLIAHREHRYRISGSALLTAMDQSPVAPPPHLASSHQAVRSQADVDREKHARSSDSSHIQVDDNTFSRVDERVARGHPTVDIAEVLRRWTHALQRVHKQSLQLAKANDGEGPELLRSSHDGGTGGHAESLAATLAEHKQHLASIQVLINQLKEVAPSIQNSILELTEEVSSISSNSSRTANFQGRSHSQAQSSGRTLEHRDDEVAEMSSRLSSMQFEKTSASPTTLKLPPLFSVTPNSLGKGGAQKQQISSQTSQIEIMPERKSLDQQFLNNSFDNSPQDNDTSFVQNLKRSVREAALRSESYYQGSSQDSRSDDSSEHYFEPVSGLGFSQHGDRANLLRRKKLFVSEPDSSFLGTGAPDSHMNIKSDGIPDLLHDLQSVDDYDGFLSTMGSNSSFSDAHRSFYDLEEAKDQVFSPPLLMDASLLADSYEDLLAPLSETETALMEH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="63122" e_stop="62999"/>
            <exon e_start="62704" e_stop="62359"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="0.984"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="63122" e_stop="62999" e_length="124"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="62998" i_stop="62705" i_length="294"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="62704" e_stop="62359" e_length="346"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63122" stop="62999"/>
              <exon start="62704" stop="62359"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246359" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAGCAAATGATGGAGAGGGTCCAGAGCTTTTGAGGAGTTCACATGATGGTGGTACTGGTGGTCATGCAGAGTCCTTGGCTGCAACCCTTGCCGAACATAAGCAGCACCTAGCAAGTATACAG : GTGCTCATAAATCAACTGAAGGAAGTCGCTCCATCCATACAGAATTCAATTTTAGAACTTACAGAAGAAGTTAGTAGTATTTCGTCCAATTCTTCTAGAACAGCCAATTTTCAGGGCAGATCACATTCCCAAGCACAGAGCAGTGGGAGAACATTGGTACTGTTTTGTGAAGCATTTTGTAAGACTTCCTTTTACCTTTTTGAAACAATAGAAAAACCTAAACTACAATATTTACTACAGGAACACAGGGATGATGAGGTAGCTGAGATGAGCTCAAGATTGTCATCCATGCAATTTGAAAAGACATCAGCTAGTCCCACTACTTTGAAGCTCCCACCTTTGTTTA</gDNA_template>
            <first_frame> K  S  K  *  W  R  G  S  R  A  F  E  E  F  T  *  W  W  Y  W  W  S  C  R  V  L  G  C  N  P  C  R  T  *  A  A  P  S  K  Y  T   : G  A  H  K  S  T  E  G  S  R  S  I  H  T  E  F  N  F  R  T  Y  R  R  S  *  *  Y  F  V  Q  F  F  *  N  S  Q  F  S  G  Q  I  T  F  P  S  T  E  Q  W  E  N  I  G  T  V  L  *  S  I  L  *  D  F  L  L  P  F  *  N  N  R  K  T  *  T  T  I  F  T  T  G  T  Q  G  *  *  G  S  *  D  E  L  K  I  V  I  H  A  I  *  K  D  I  S  *  S  H  Y  F  E  A  P  T  F  V   </first_frame>
            <second_frame>  K  A  N  D  G  E  G  P  E  L  L  R  S  S  H  D  G  G  T  G  G  H  A  E  S  L  A  A  T  L  A  E  H  K  Q  H  L  A  S  I  Q  :  V  L  I  N  Q  L  K  E  V  A  P  S  I  Q  N  S  I  L  E  L  T  E  E  V  S  S  I  S  S  N  S  S  R  T  A  N  F  Q  G  R  S  H  S  Q  A  Q  S  S  G  R  T  L  V  L  F  C  E  A  F  C  K  T  S  F  Y  L  F  E  T  I  E  K  P  K  L  Q  Y  L  L  Q  E  H  R  D  D  E  V  A  E  M  S  S  R  L  S  S  M  Q  F  E  K  T  S  A  S  P  T  T  L  K  L  P  P  L  F  </second_frame>
            <third_frame>   K  Q  M  M  E  R  V  Q  S  F  *  G  V  H  M  M  V  V  L  V  V  M  Q  S  P  W  L  Q  P  L  P  N  I  S  S  T  *  Q  V  Y  R :   C  S  *  I  N  *  R  K  S  L  H  P  Y  R  I  Q  F  *  N  L  Q  K  K  L  V  V  F  R  P  I  L  L  E  Q  P  I  F  R  A  D  H  I  P  K  H  R  A  V  G  E  H  W  Y  C  F  V  K  H  F  V  R  L  P  F  T  F  L  K  Q  *  K  N  L  N  Y  N  I  Y  Y  R  N  T  G  M  M  R  *  L  R  *  A  Q  D  C  H  P  C  N  L  K  R  H  Q  L  V  P  L  L  *  S  S  H  L  C  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63121" stop="62999"/>
                    <exon start="62704" stop="62360"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>468</number_coding_nucleotides>
                  <number_encoded_amino_acids>156</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KANDGEGPELLRSSHDGGTGGHAESLAATLAEHKQHLASIQVLINQLKEVAPSIQNSILELTEEVSSISSNSSRTANFQGRSHSQAQSSGRTLVLFCEAFCKTSFYLFETIEKPKLQYLLQEHRDDEVAEMSSRLSSMQFEKTSASPTTLKLPPLF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="70755" PGL_stop="74421"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70755" e_stop="70856"/>
            <exon e_start="72687" e_stop="72783"/>
            <exon e_start="72903" e_stop="72977"/>
            <exon e_start="73302" e_stop="73369"/>
            <exon e_start="74052" e_stop="74181"/>
            <exon e_start="74293" e_stop="74421"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.981" acc_prob="1.000" e_score="0.990"/>
          <exon-intron don_prob="0.968" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.920" e_score="1.000"/>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="70755" e_stop="70856" e_length="102"/>
          </exon>
          <intron i_serial="1" don_prob="0.981" acc_prob="1.000">
            <gDNA_intron_boundary i_start="70857" i_stop="72686" i_length="1830"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72687" e_stop="72783" e_length="97"/>
          </exon>
          <intron i_serial="2" don_prob="0.968" acc_prob="0.982">
            <gDNA_intron_boundary i_start="72784" i_stop="72902" i_length="119"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="72903" e_stop="72977" e_length="75"/>
          </exon>
          <intron i_serial="3" don_prob="0.986" acc_prob="0.999">
            <gDNA_intron_boundary i_start="72978" i_stop="73301" i_length="324"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="73302" e_stop="73369" e_length="68"/>
          </exon>
          <intron i_serial="4" don_prob="0.960" acc_prob="0.998">
            <gDNA_intron_boundary i_start="73370" i_stop="74051" i_length="682"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="74052" e_stop="74181" e_length="130"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.920">
            <gDNA_intron_boundary i_start="74182" i_stop="74292" i_length="111"/>
          </intron>
          <exon e_serial="6" e_score="0.913">
            <gDNA_exon_boundary e_start="74293" e_stop="74421" e_length="129"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70755" stop="70856"/>
              <exon start="72687" stop="72783"/>
              <exon start="72903" stop="72977"/>
              <exon start="73302" stop="73369"/>
              <exon start="74052" stop="74181"/>
              <exon start="74293" stop="74360"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480176" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70759" stop="70856"/>
              <exon start="72687" stop="72783"/>
              <exon start="72903" stop="72977"/>
              <exon start="73302" stop="73369"/>
              <exon start="74052" stop="74181"/>
              <exon start="74293" stop="74421"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70759" stop="70856"/>
              <exon start="72687" stop="72783"/>
              <exon start="72903" stop="72977"/>
              <exon start="73302" stop="73369"/>
              <exon start="74052" stop="74131"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444661" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70760" stop="70856"/>
              <exon start="72687" stop="72783"/>
              <exon start="72903" stop="72977"/>
              <exon start="73302" stop="73369"/>
              <exon start="74052" stop="74181"/>
              <exon start="74293" stop="74313"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E270723" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70781" stop="70856"/>
              <exon start="72687" stop="72783"/>
              <exon start="72903" stop="72977"/>
              <exon start="73302" stop="73361"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278349" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72738" stop="72783"/>
              <exon start="72903" stop="72977"/>
              <exon start="73302" stop="73369"/>
              <exon start="74052" stop="74181"/>
              <exon start="74293" stop="74419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E282927" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTCTTCTTTGCTTGTGTGGGTAATGATAGTTGATTCTGCACCAGCTACAAAGCGCCAGAGATTCACCGCCGTTGATCCGATGGAGTTGGAATCAGCTAAG : GCGAAGCTTGCTGCTGCAAAAGAAACGTTTGGACGTGAAATCCGTGTATTTGAAACAGCAACAGCTTCTTCAGTGCCTCCTGATGTTTCCAGCAATG : TGTCAGAGGAGCCCGAAGACTTCTATGAGTTCACACCAGAGGATTATTATCGACTTTTGGGAACTAAAAAAGAAG : AGAAGCACTTGAAGACGAAGAAAATTCGTGAGGCAGAAGAAGCTGCACGCAGAGCAAGGATAACTAAG : GCTGTAATCAGAGTACGCTTCCCGGATAATTATATATTGGAGGCCACATTTCATCCGTCAGAGACAATCAAGAGCTTACTTGACCTTCTTGTGAAAGTGATTGCTCACCCTGAACTGCCTTTCTATATCT : ATACCACTCCTCCTAAGAAGCAAATAAAAGATTTTTCCAAGGATTTCTATTCCGCTGGATTTATTCCTGGTGCTGTTGTTTATTTCTCTTACGATCTACCCAAAGGTTAGTGCAAACTGTTAACAGTCT</gDNA_template>
            <first_frame> N  S  S  L  L  V  W  V  M  I  V  D  S  A  P  A  T  K  R  Q  R  F  T  A  V  D  P  M  E  L  E  S  A  K  :  A  K  L  A  A  A  K  E  T  F  G  R  E  I  R  V  F  E  T  A  T  A  S  S  V  P  P  D  V  S  S  N   : V  S  E  E  P  E  D  F  Y  E  F  T  P  E  D  Y  Y  R  L  L  G  T  K  K  E   : E  K  H  L  K  T  K  K  I  R  E  A  E  E  A  A  R  R  A  R  I  T  K  :  A  V  I  R  V  R  F  P  D  N  Y  I  L  E  A  T  F  H  P  S  E  T  I  K  S  L  L  D  L  L  V  K  V  I  A  H  P  E  L  P  F  Y  I   : Y  T  T  P  P  K  K  Q  I  K  D  F  S  K  D  F  Y  S  A  G  F  I  P  G  A  V  V  Y  F  S  Y  D  L  P  K  G  *  C  K  L  L  T  V  </first_frame>
            <second_frame>  I  L  L  C  L  C  G  *  *  *  L  I  L  H  Q  L  Q  S  A  R  D  S  P  P  L  I  R  W  S  W  N  Q  L  R :   R  S  L  L  L  Q  K  K  R  L  D  V  K  S  V  Y  L  K  Q  Q  Q  L  L  Q  C  L  L  M  F  P  A  M  :  C  Q  R  S  P  K  T  S  M  S  S  H  Q  R  I  I  I  D  F  W  E  L  K  K  K  :  R  S  T  *  R  R  R  K  F  V  R  Q  K  K  L  H  A  E  Q  G  *  L  R :   L  *  S  E  Y  A  S  R  I  I  I  Y  W  R  P  H  F  I  R  Q  R  Q  S  R  A  Y  L  T  F  L  *  K  *  L  L  T  L  N  C  L  S  I  S  :  I  P  L  L  L  R  S  K  *  K  I  F  P  R  I  S  I  P  L  D  L  F  L  V  L  L  F  I  S  L  T  I  Y  P  K  V  S  A  N  C  *  Q  S </second_frame>
            <third_frame>   F  F  F  A  C  V  G  N  D  S  *  F  C  T  S  Y  K  A  P  E  I  H  R  R  *  S  D  G  V  G  I  S  *   : G  E  A  C  C  C  K  R  N  V  W  T  *  N  P  C  I  *  N  S  N  S  F  F  S  A  S  *  C  F  Q  Q  C :   V  R  G  A  R  R  L  L  *  V  H  T  R  G  L  L  S  T  F  G  N  *  K  R  R :   E  A  L  E  D  E  E  N  S  *  G  R  R  S  C  T  Q  S  K  D  N  *   : G  C  N  Q  S  T  L  P  G  *  L  Y  I  G  G  H  I  S  S  V  R  D  N  Q  E  L  T  *  P  S  C  E  S  D  C  S  P  *  T  A  F  L  Y  L :   Y  H  S  S  *  E  A  N  K  R  F  F  Q  G  F  L  F  R  W  I  Y  S  W  C  C  C  L  F  L  L  R  S  T  Q  R  L  V  Q  T  V  N  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0121H01.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70755" stop="70856"/>
                    <exon start="72687" stop="72783"/>
                    <exon start="72903" stop="72977"/>
                    <exon start="73302" stop="73369"/>
                    <exon start="74052" stop="74181"/>
                    <exon start="74293" stop="74402"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>579</number_coding_nucleotides>
                  <number_encoded_amino_acids>193</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSSLLVWVMIVDSAPATKRQRFTAVDPMELESAKAKLAAAKETFGREIRVFETATASSVPPDVSSNVSEEPEDFYEFTPEDYYRLLGTKKEEKHLKTKKIREAEEAARRARITKAVIRVRFPDNYILEATFHPSETIKSLLDLLVKVIAHPELPFYIYTTPPKKQIKDFSKDFYSAGFIPGAVVYFSYDLPKG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 154 chains have been computed
$ 
$ memory statistics:
$ 180632 bytes spliced alignments in total
$ 83 spliced alignments have been stored
$ 2176 bytes was the average size of a spliced alignment
$ 24528 bytes predicted gene locations in total
$ 14 predicted gene locations have been stored
$ 1752 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 168 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 11:08:36
-->
