<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 11:31:57"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLe0123B22-qs97f/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U600540" ref_strand="+" ref_description="SGN-U600540 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|147859411|emb|CAN79264.1| (e_value=3e-33) hypothetical; ">
      <seq>gatctttttagaaaaatctagtgagaaaaaataattaagaaaaaaaaactgtagcacatattttaaccccgatgatgaataccacgattgagatggttaaattttcgcattccagtcttgtctattatcttatgaagagttaaggctggtaaagatttagtgaatagatctgctgaattatctcttcaacgaatcgcttcaacggatttattgtatatcattttcaccattattctgaagatcatgagtgaagaataattttgggaaaaagtgtttcgctctatctctttttatgaagcttcctcttaattgagctatgcatgcaacactatcttcaaagagcacggtgggtaccttgacattagacttcaaaccacatctttttttgatgaaatgtttcagtgatctcaatcatacacattctctacgtgttccatgaatgactattatttcaacatgatttgaagaagtagcgataatagattgctttctagatccccatgatataattgtacctccgtatgtgaatagatagcccatttgagatcaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0123B22.1" temp_strand="+" temp_description="C02SLe0123B22.1  AC215465.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0123B22 sequenced_by:kribb upload_account_name:korea">
        <position start="39263" stop="40412"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39562" g_stop="40114" g_length="553"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="553" r_length="553" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0123B22.1" gen_strand="+" ref_id="SGN-U600540" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0123B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U600540" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39562" e_stop="40114"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCTTTTTAGAAAAATCTAGTGAGAAAAAATAATTAAGAAAAAAAAACTGTAGCACATATTTTAACCCCGATGATGAATACCACGATTGAGATGGTTAAATTTTCGCATTCCAGTCTTGTCTATTATCTTATGAAGAGTTAAGGCTGGTAAAGATTTAGTGAATAGATCTGCTGAATTATCTCTTCAACGAATCGCTTCAACGGATTTATTGTATATCATTTTCACCATTATTCTGAAGATCATGAGTGAAGAATAATTTTGGGAAAAAGTGTTTCGCTCTATCTCTTTTTATGAAGCTTCCTCTTAATTGAGCTATGCATGCAACACTATCTTCAAAGAGCACGGTGGGTACCTTGACATTAGACTTCAAACCACATCTTTTTTTGATGAAATGTTTCAGTGATCTCAATCATACACATTCTCTACGTGTTCCATGAATGACTATTATTTCAACATGATTTGAAGAAGTAGCGATAATAGATTGCTTTCTAGATCCCCATGATATAATTGTACCTCCGTATGTGAATAGATAGCCCATTTGAGATCAAACT</genome_strand>
        <mrna_strand>GATCTTTTTAGAAAAATCTAGTGAGAAAAAATAATTAAGAAAAAAAAACTGTAGCACATATTTTAACCCCGATGATGAATACCACGATTGAGATGGTTAAATTTTCGCATTCCAGTCTTGTCTATTATCTTATGAAGAGTTAAGGCTGGTAAAGATTTAGTGAATAGATCTGCTGAATTATCTCTTCAACGAATCGCTTCAACGGATTTATTGTATATCATTTTCACCATTATTCTGAAGATCATGAGTGAAGAATAATTTTGGGAAAAAGTGTTTCGCTCTATCTCTTTTTATGAAGCTTCCTCTTAATTGAGCTATGCATGCAACACTATCTTCAAAGAGCACGGTGGGTACCTTGACATTAGACTTCAAACCACATCTTTTTTTGATGAAATGTTTCAGTGATCTCAATCATACACATTCTCTACGTGTTCCATGAATGACTATTATTTCAACATGATTTGAAGAAGTAGCGATAATAGATTGCTTTCTAGATCCCCATGATATAATTGTACCTCCGTATGTGAATAGATAGCCCATTTGAGATCAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U591718" ref_strand="+" ref_description="SGN-U591718 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|48057631|gb|AAT39954.1| (e_value=1e-28) putative integrase [Solanum demissum]; ">
      <seq>gggatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0123B22.1" temp_strand="+" temp_description="C02SLe0123B22.1  AC215465.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0123B22 sequenced_by:kribb upload_account_name:korea">
        <position start="59373" stop="60297"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59672" g_stop="59997" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="326" r_length="326" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0123B22.1" gen_strand="+" ref_id="SGN-U591718" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>326</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0123B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U591718" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59672" e_stop="59997"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAGTTTGGAGAAAGCTAAGTCATACCCAGAATCACATCGAAGTCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGCTCCCCATAAAAGTTACAAGACAAGACCTATACACATTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAATCAATTCACAATGTAAATTAAGACCAGTAGCGAATGAGGAAGATACATATGAAAATGTGGAGCCAGGTTCAAATAATACATAAGCCATACAATCAC</genome_strand>
        <mrna_strand>GGGATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U590648" ref_strand="+" ref_description="SGN-U590648 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|113205316|gb|ABI34339.1| (e_value=2e-17) Polyprotein,; ">
      <seq>gcacctagcccatctggtactaaggcggtgacacctccaccaactgaggaagtggtaagagagggtgaggatggggagaatgaacaagtgcagaatgaggaattgccaccccaacctacccaagagatgatcaatcaggttcttgcttaccttagcgggttatctgatcaaggccaagcacctccagtgttttctgcactagcacctcaggctccggaggtacaacatgcgcctactgtgactccccgcatcgatacctcattggaaataggaacgtttccccgtctgactacagggcctataatgacaaatgatcagcatgaactttttagtaagttcttgaaattgaaacctcaagtctacaagggtgttgaatctgaggatgcctacgattttctggttgactgtcatgagctactacacaagatgggtatagtagaacggtttggtgttgagtttgtgacttatcagtttcaagggaacgccaaaatgtggtggcggtcacatgttgagtgtcaaccaacagaggcaccacgtatgacttgggcatcattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0123B22.1" temp_strand="-" temp_description="C02SLe0123B22.1  AC215465.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0123B22 sequenced_by:kribb upload_account_name:korea">
        <position start="61654" stop="60499"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61354" g_stop="60799" g_length="556"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="556" r_length="556" r_score="0.906"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0123B22.1" gen_strand="-" ref_id="SGN-U590648" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0123B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U590648" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61354" e_stop="60799"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCACCTAGCCCATCTGATACTAGGGCGGTGACTCCTCCACCGACTGAAGAAGTAGTAAGAGAGGGTGAGGAAGGGGAAACTGAGCAAGTGCAAAATGAGGAACTACCACCAAAACCTACCCCACAGATGATAAATCAGGTTCTTGCTTATCTTAGTGGGTTATCTGATCAAGGTCAAACACCTCCAGTGTTTTCTGCACCAGCACCTCAGGTTCCGGAAGTACAACAGCCAACTGCTGCGGCTCCCCGCACGGATGTTCCATTGGAAATAGGCACGTTTCCTCGTCTGACTACAGGGCCTATAATGACAAATGATCAACATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTAAATCTAATGATGCCTATGATTTTCTAGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACAGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCATAATTCT</genome_strand>
        <mrna_strand>GCACCTAGCCCATCTGGTACTAAGGCGGTGACACCTCCACCAACTGAGGAAGTGGTAAGAGAGGGTGAGGATGGGGAGAATGAACAAGTGCAGAATGAGGAATTGCCACCCCAACCTACCCAAGAGATGATCAATCAGGTTCTTGCTTACCTTAGCGGGTTATCTGATCAAGGCCAAGCACCTCCAGTGTTTTCTGCACTAGCACCTCAGGCTCCGGAGGTACAACATGCGCCTACTGTGACTCCCCGCATCGATACCTCATTGGAAATAGGAACGTTTCCCCGTCTGACTACAGGGCCTATAATGACAAATGATCAGCATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCAAGTCTACAAGGGTGTTGAATCTGAGGATGCCTACGATTTTCTGGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACGGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACGTATGACTTGGGCATCATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U573604" ref_strand="+" ref_description="SGN-U573604 Tomato 200607#2 [9 ESTs aligned] ">
      <seq>ttactgtggatccagaaggctgcaggtttgatttgacagtcgaaaaatctttaagcttaatcatgtaaagtatattctatccatattaattaacatgcacaaattacaaaattaaaacatgtcacccctacattaaattttgtcaatttattattctctcttcctatagatataggtaaaataaaaaaatataggtcctcattcagccaccataattagtaaagcaaggacaattgttcgacaggaatttggccttccattattaccattgaatatgacatatgaatttaagtttttgaacttttgctttttgagtttttcaaatatgttataatatctccttaatatatatgcactttacacatgtgtaaaaaacaaaaattatttattttttcatattatcaatatatataaaaaaatttaaaaaataattacggtctcggttctatcaaatgaaaaatgataagaagcaaaggcttgcaaatagctttgattgaagtagacggataacttattgttttggttcatcacaaaaaacaaggggtccttcttgtaccttagatgtttttagtgtatatcgaaaataatatttgaaatagaaaaaaattcgtaaaaattatgtttgatacggagaaagtcattttccaagtaagtattagaaagtcatttgctggtatgcatgtatttaactgttaaaaggggattttttttctttcaaaaacctctctttataatccaatttttttcataattttaggatcgagaatatgaggtaattatcatttgagcaactctcggttatccctctctatatatagcaaaacattgaaactggttaaaatcacttccccttgaggatagtttaagttatgtatatataaattaagtttgatatgataactcacaaatagaaagaataaccttttacaatcaattaaattgagctgataatgtaaaatatcggtatatataactgaaatatgcatgtatacaagcactgggacttcaaatatcagccacagaacatgtatacaacctcgattctttaccaaaaattaaacgtgacttaaaagtttaatttcaatataatctgaaataagtagttttcattcatttcatatttagtgtcttaatttcactatacacaaaggttaaagaatgaaaagaagataatctgtgatcttaaatataattaataatgtatattttaaattttattatcttaaatttatcaggaaaaatattgaaattgaaatacttattaaatatatatataaaaaaaccactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0123B22.1" temp_strand="-" temp_description="C02SLe0123B22.1  AC215465.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0123B22 sequenced_by:kribb upload_account_name:korea">
        <position start="122190" stop="120323"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121887" g_stop="120623" g_length="1265"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="1288" r_length="1264" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0123B22.1" gen_strand="-" ref_id="SGN-U573604" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1265</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0123B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U573604" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121887" e_stop="120623"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTTTGATTTGACAGTCGAAAAATCTTTAAGCTTAATCATGTAAAGTATATTCTATCCATATTAATTAACATGCACAAATTACAAAATTAAAACATGTCACCCCTACATTAAATTTTGTCAATTTATTATTCTCTCTTCCTATAGATATAGGTAAAATAAAAAAATATAGGTCCTCATTCAGCCACCATAATTAGTAAAGCAAGGACAATTGTTCGACAGGAATTTGGCCTTCCATTATTACCATTGAATATGACATATGAATTTAAGTTTTTGAACTTTTGCTTTTTGAGTTTTTCAAATATGTTATAATATCTCCTTAATATATATGCACTTTACACATGTGTAAAAAACAAAAATTATTTATTTTTTCATATTATCAATATATATAAAAAAATTTAAAAAATAATTACGGTCTCGGTTCTATCAAATGAAAAATGATAAGAAGCAAAGGCTTGCAAATAGCTTTGATTGAAGTAGACGGATAACTTATTGTTTTGGTTCATCACAAAAAACAAGGGGTCCTTCTTGTACCTTAGATGTTTTTAGTGTATATCGAAAATAATATTTGAAATAGAAAAAAATTCGTAAAAATTATGTTTGATACGGAGAAAGTCATTTTCCAAGTAAGTATTAGAAAGTCATTTGCTGGTATGCATGTATTTAACTGTTAAAAGGGGATTTTTTTTCTTTCAAAAACCTCTCTTTATAATCCAATTTTTTTCATAATTTTAGGATCGAGAATATGAGGTAATTATCATTTGAGCAACTCTCGGTTATCCCTCTCTATATATAGCAAAACATTGAAACTGGTTAAAATCACTTCCCCTTGAGGATAGTTTAAGTTATGTATATATAAATTAAGTTTGATATGATAACTCACAAATAGAAAGAATAACCTTTTACAATCAATTAAATTGAGCTGATAATGTAAAATATCGGTATATATAACTGAAATATGCATGTATACAAGCAGTGGGACTTCAAATATCAGCCACAGAACATGTATACAACCTCGATTCTTTACCAAAAATTAAACGTGACTTAAAAGTTTAATTTCAATATAATCTGAAATAAGTAGTTTTCATTCATTTCATATTTAGTGTCTTAATTTCACTATACACAAAGGTTAAAGAATGAAAAGAAGATAATCTGTGATCTTAAATATAATTAATAATGTATATTTTAAATTTTATTATCTTAAATTTATCAGGAAAAATATTGAAATTGAAATACTTATTAAATATATATATAAAAAAACCACTC</genome_strand>
        <mrna_strand>GG-TTTGATTTGACAGTCGAAAAATCTTTAAGCTTAATCATGTAAAGTATATTCTATCCATATTAATTAACATGCACAAATTACAAAATTAAAACATGTCACCCCTACATTAAATTTTGTCAATTTATTATTCTCTCTTCCTATAGATATAGGTAAAATAAAAAAATATAGGTCCTCATTCAGCCACCATAATTAGTAAAGCAAGGACAATTGTTCGACAGGAATTTGGCCTTCCATTATTACCATTGAATATGACATATGAATTTAAGTTTTTGAACTTTTGCTTTTTGAGTTTTTCAAATATGTTATAATATCTCCTTAATATATATGCACTTTACACATGTGTAAAAAACAAAAATTATTTATTTTTTCATATTATCAATATATATAAAAAAATTTAAAAAATAATTACGGTCTCGGTTCTATCAAATGAAAAATGATAAGAAGCAAAGGCTTGCAAATAGCTTTGATTGAAGTAGACGGATAACTTATTGTTTTGGTTCATCACAAAAAACAAGGGGTCCTTCTTGTACCTTAGATGTTTTTAGTGTATATCGAAAATAATATTTGAAATAGAAAAAAATTCGTAAAAATTATGTTTGATACGGAGAAAGTCATTTTCCAAGTAAGTATTAGAAAGTCATTTGCTGGTATGCATGTATTTAACTGTTAAAAGGGGATTTTTTTTCTTTCAAAAACCTCTCTTTATAATCCAATTTTTTTCATAATTTTAGGATCGAGAATATGAGGTAATTATCATTTGAGCAACTCTCGGTTATCCCTCTCTATATATAGCAAAACATTGAAACTGGTTAAAATCACTTCCCCTTGAGGATAGTTTAAGTTATGTATATATAAATTAAGTTTGATATGATAACTCACAAATAGAAAGAATAACCTTTTACAATCAATTAAATTGAGCTGATAATGTAAAATATCGGTATATATAACTGAAATATGCATGTATACAAGCACTGGGACTTCAAATATCAGCCACAGAACATGTATACAACCTCGATTCTTTACCAAAAATTAAACGTGACTTAAAAGTTTAATTTCAATATAATCTGAAATAAGTAGTTTTCATTCATTTCATATTTAGTGTCTTAATTTCACTATACACAAAGGTTAAAGAATGAAAAGAAGATAATCTGTGATCTTAAATATAATTAATAATGTATATTTTAAATTTTATTATCTTAAATTTATCAGGAAAAATATTGAAATTGAAATACTTATTAAATATATATATAAAAAAACCACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U602726" ref_strand="+" ref_description="SGN-U602726 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|75107026|sp|P81391|MYB05_ANTMA (e_value=1e-45) Myb-related; (*ATH) AT5G40350.1 (e_value=3e-42) | Symbol: None | myb family transcription factor (MYB24), similar to Myb26 GI:1841475 from (Pisum sativum) | chr5:16155774-16158362 REVERSE | Aliases: MPO12.60, MPO12_60; (*SWP) sp|P81391|MYB05_ANTMA (e_value=1e-46) Myb-related protein 305 OS=Antirrhinum majus GN=MYB305; ">
      <seq>gtttttcttcacatcccattcctcttctcttctttattatataaaaaaaatggataaaagaacatgtgattctcaagatgttgaagttaggaaaggtccttggactatggaagaagatttgattctcatcaattacattgctaatcatggtgaaggtgtttggaattccctcgctcgatccgctggtttgaagcgtactggaaaaagttgtagacttagatggcttaattatctccgacctgatgttcggaggggaaatattacaccggaggaacaattgttgatcatggaactacatgccaagtggggaaaccggtgagttgatttctttttctagctagggttttgataattaaataaaatgatgaaattatataaaagaaaatttggaaaattgtagaaatttctccttcatttttttaaaaatgaaaaataaaaaaaatctcccatgtgtttgtatgtgttggatggataaagaggaattgtcccaaaatctcttagaactagatttgacatcatgaaagagagtgatggggaatttacaacgtgtttaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0123B22.1" temp_strand="-" temp_description="C02SLe0123B22.1  AC215465.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0123B22 sequenced_by:kribb upload_account_name:korea">
        <position start="123295" stop="122068"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="122996" g_stop="122812" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="122811" i_stop="122738" i_length="74">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="122737" g_stop="122368" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="555" r_length="370" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0123B22.1" gen_strand="-" ref_id="SGN-U602726" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>555</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0123B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U602726" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="122996" e_stop="122812"/>
          <exon e_start="122737" e_stop="122368"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTCTTCACATCCCATTCCTCTTCTCTTCTTTATTATATAAAAAAAATGGATAAAAGAACATGTGATTCTCAAGATGTTGAAGTTAGGAAAGGTCCTTGGACTATGGAAGAAGATTTGATTCTCATCAATTACATTGCTAATCATGGTGAAGGTGTTTGGAATTCCCTCGCTCGATCCGCTGGTACTAATTGATCGTCATGTTTAGATTGGGGCTTAATTATGTTGTATATATTTAATTTTTTTCGTGTGTAATAGGTTTGAAGCGTACTGGAAAAAGTTGTAGACTTAGATGGCTTAATTATCTCCGACCTGATGTTCGGAGGGGAAATATTACACCGGAGGAACAATTGTTGATCATGGAACTACATGCCAAGTGGGGAAACCGGTGAGTTGATTTCTTTTTCTAGCTAGGGTTTTGATAATTAAATAAAATGATGAAATTATATAAAAGAAAATTTGGAAAATTGTAGAAATTTCTCCTTCATTTTTTTAAAAATGAAAAATAAAAAAAATCTCCCATGTGTTTGTATGTGTTGGATGGATAAAGAGGAATTGTCCCAAAATCTCTTAGAACTAGATTTGACATCATGAAAGAGAGTGATGGGGAATTTACAACGTGTTTAAT</genome_strand>
        <mrna_strand>GTTTTTCTTCACATCCCATTCCTCTTCTCTTCTTTATTATATAAAAAAAATGGATAAAAGAACATGTGATTCTCAAGATGTTGAAGTTAGGAAAGGTCCTTGGACTATGGAAGAAGATTTGATTCTCATCAATTACATTGCTAATCATGGTGAAGGTGTTTGGAATTCCCTCGCTCGATCCGCTG..........................................................................GTTTGAAGCGTACTGGAAAAAGTTGTAGACTTAGATGGCTTAATTATCTCCGACCTGATGTTCGGAGGGGAAATATTACACCGGAGGAACAATTGTTGATCATGGAACTACATGCCAAGTGGGGAAACCGGTGAGTTGATTTCTTTTTCTAGCTAGGGTTTTGATAATTAAATAAAATGATGAAATTATATAAAAGAAAATTTGGAAAATTGTAGAAATTTCTCCTTCATTTTTTTAAAAATGAAAAATAAAAAAAATCTCCCATGTGTTTGTATGTGTTGGATGGATAAAGAGGAATTGTCCCAAAATCTCTTAGAACTAGATTTGACATCATGAAAGAGAGTGATGGGGAATTTACAACGTGTTTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565237" ref_strand="+" ref_description="SGN-U565237 Tomato 200607#2 [20 ESTs aligned] (*GB) gi|17433052|sp|Q9FV54|DEFC_SOLLC (e_value=2e-133) RecName:; (*ATH) AT5G14660.2 (e_value=3e-87)  Symbol: None | peptide deformylase, chloroplast / polypeptide deformylase 1B (PDF1B), identical to SP:Q9FUZ2 Peptide deformylase, chloroplast precursor (EC 3.5.1.88) (PDF) (Polypeptide deformylase) {Arabidopsis thaliana}; supporting cDNA gi:11320965... ; (*SWP) sp|Q9FV54|DEFC_SOLLC (e_value=1e-134) Peptide deformylase, chloroplastic OS=Solanum lycopersicum GN=PDF1B; ">
      <seq>acgaaggacaaaattagtaatatttgcatctgtagaggtgaaattgtccgttttgttgtgtggcaaatggcaatggctgccgcaagttgggcatcttcttcttcgttcactcgctttctccggcctctcctcagtcggaactcgtctccctcccctatcagttacagtcttcatcgatataaatcagctaactgtttatttttctccgcaagcagtaataaacctccaaaattagctgtttatgctcaagctaggcgagttttatcttccaaaaccaaaggagatgaaatagcaactcctgctgacttgagcttcgtggttccattgaaaattgtggagtatccagacccgattttaagagcgaagaataagaggattgacaattttgacgctaatttgaagaagttagttgatgaaatgttcgatattatgtacaaaactgatggcattgggctgtctgcaccacaagttggaatgaatgttcaactaatggtatttaatgcagccggtgaacgtggagagggggaggagattgttctcgtcaatccacgtgtcagtagatattctaggaggattataccttatgaagaaggttgcttatcttttccaatgatacatggtgatgttaagagaccagagtcagttaaggttgacgcacaggacattaatggtacaaggtttgagataagcttgtctgctcttccagcacgagtcttccaacatgaatttgatcacctacagggagttcttttctttgacaaaatgactgacgaagtcctggacaccattcgtgaaaaattagtggcgctagaaaagaaatatgaagataggactgggttgccaacccctgaaagcataaatacacgaaaaataaagaaggctgctgttggatttggcaaatcatgaatttactgggatctatgaaatcttctcagtatttgtatgatgaagcacaaaatgggattgccagcttttgctgaactttggtatatgccattaatttagacacttgtgctttgtgaaactagccaaaagtgtggcctctgaggtttatccttgtactgatactgctctgtttaggaatgatagggttaccacagaaatttgtatggaaaaagaactgttaagtacatttgatcaaatattgaacaccaagtttgtcgtttaacacttgggttgttgtagttcagtgtggagaaaaacaactcaagagaagttccataagttccccagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0123B22.1" temp_strand="+" temp_description="C02SLe0123B22.1  AC215465.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0123B22 sequenced_by:kribb upload_account_name:korea">
        <position start="131955" stop="136005"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132255" g_stop="132552" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="298" r_length="298" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="132553" i_stop="132646" i_length="94">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132647" g_stop="132785" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="437" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132786" i_stop="133275" i_length="490">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="133276" g_stop="133468" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="630" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="133469" i_stop="134504" i_length="1036">
            <donor d_prob="0.204" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="134505" g_stop="134615" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="631" r_stop="741" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="134616" i_stop="135043" i_length="428">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.448" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="135044" g_stop="135106" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="742" r_stop="804" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="135107" i_stop="135195" i_length="89">
            <donor d_prob="0.537" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="135196" g_stop="135326" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="805" r_stop="935" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="135327" i_stop="135405" i_length="79">
            <donor d_prob="0.930" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="135406" g_stop="135705" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="936" r_stop="1235" r_length="300" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0123B22.1" gen_strand="+" ref_id="SGN-U565237" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1235</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0123B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U565237" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="132255" e_stop="132552"/>
          <exon e_start="132647" e_stop="132785"/>
          <exon e_start="133276" e_stop="133468"/>
          <exon e_start="134505" e_stop="134615"/>
          <exon e_start="135044" e_stop="135106"/>
          <exon e_start="135196" e_stop="135326"/>
          <exon e_start="135406" e_stop="135705"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGAAGGACAAAATTAGTAATATTTGCATCTGTAGAGGTGAAATTGTCCGTTTTGTTGTGTGGCAAATGGCAATGGCTGCCGCAAGTTGGGCATCTTCTTCTTCGTTCACTCGCTTTCTCCGGCCTCTCCTCAGTCGGAACTCGTCTCCCTCCCCTATCAGTTACAGTCTTCATCGATATAAATCAGCTAACTGTTTATTTTTCTCCGCAAGCAGTAATAAACCTCCAAAATTAGCTGTTTATGCTCAAGCTAGGCGAGTTTTATCTTCCAAAACCAAAGGAGATGAAATAGCAACTCGTAAGCATCCTTCTAGATTCTGACCTAAAAATCAATCTATTTGTGGTCAATTTTCTTTTTCGCAGATTGAAATTCTTCTTTTTGTGTGTGGTAGCTGCTGACTTGAGCTTCGTGGTTCCATTGAAAATTGTGGAGTATCCAGACCCGATTTTAAGAGCGAAGAATAAGAGGATTGACAATTTTGACGCTAATTTGAAGAAGTTAGTTGATGAAATGTTCGATATTATGTACAAGTGAGTCCATCCGTTTCTTACAATCCATAACTACTTGTCCTTTTGAGTTTTCATAACTTATTTTAATGCAAAAATCAGTTGTTCAATCAGTAAACTGGATAACTCAATCTATTGGAGCTTCGCAAAGCATGACTGATCCCAAACCTAGATATAGGAAGAGATTATTCTTGGTGGAGGTCTAATTATGTTGAAAATAAAACAAAAATAGTTATGGCGACACAAATTTAGAATAATGGAATCCGACTAGTTTGGAATTGAGGTGTAACTGACTGATTTATTGAATTAAGAATAGATGGATTTTGACACAAATTTAGAATAGTGGAATCCGACTAGTTGGGAATTGAGGTGTAACTGACTGATTTATTGAATTAAGAATAGATGGATTGTTGATGTTTTAGTTGTTAGATACATTAGTTTTATTTTGTTTATAAGAAAAGCTTGCTATTCAGAGGACCTTAAAGGATGCTTGGCTTTGATATTATATATGCAGAACTGATGGCATTGGGCTGTCTGCACCACAAGTTGGAATGAATGTTCAACTAATGGTATTTAATGCAGCCGGTGAACGTGGAGAGGGGGAGGAGATTGTTCTCGTCAATCCACGTGTCAGTAGATATTCTAGGAGGATTATACCTTATGAAGAAGGTTGCTTATCTTTTCCAATGATACATGGTGATGTTAAGGTACTTGGACCTGTAAACCATTCTTTGTCTGATCGCGAGTCAATCTACTGCCTTACTCTCTGTCTGTGAGAGAGATAATATGAACCCCGTGGTCGAGTGGGATCAAATATGATTGACGTAATCTGTCCAAATCCCTCAAGAATCTGCTATGCAGTTGATACTTTTCTTATTTAAAAAATAGTGTTTGTGTGTTGAATATATATATGTATCTTAAATGAAACTTAAGAAATGGTAGAGAGCTCCAAGTACGTTTTATTTTCTATCTTGTATAATATTGGTGTAAGATGAGCCTCAATGGAGTGACATACCCAATGACAATTTATATAGCCAAACCTAACTTGCTTGGAGTGGACGCATGATACCATGTACCAACTCATGACATCATGAGGTTAGTCGTGAATATATCTGAAAGGATGGTAAGGCACATCTGCAACCTCATGAGGGTTTTTCCTAGCATTTATGTTGTTGAATTGGTAGCTACACCATTCTGAAGAATTTGACTTGCTGTCTCTTGCTCCTGGAAAAGTTGCTCCAATGAGCTAGTCGAACTTTTACAGAAACCAGCAACTTCTATTGCTTTAGGAAAAATACAGATGTCATATCAGCAGTTCTACAGACTACATGTATCTAACTTTTTATGAATGGTCAATTTTGTTGTTGTGCTTCAGGAATGTAAGATAGACAGCATCTCAAGGACTTATGCCAAAGACATCCTAATCCTCTAGTTTGCAAGTGTCCCTATTGAACTAGTAACTTCCAACTTATACATCATAATTCTTCTTCTGGCTCATTAACCTGGTAAAGAGCTTACATAATAGAGCTGCTTGGATTTTGGGTGACTTGTCCAAAAAAATTCAAAAGTATTTGAAGTAGAACTGTAATCCTAAAACAGTTTGCATTTTACAAAAGCTTACCTGGTGAATCTTTGTTGCTAACTGCTTTAGTGTCTAGGAACCTGAATCTGCTATTTGAATTGTGAAGTTTTCTGACTTTCTAAATTGTTACAAGATTATTTATATATGTTGTGTGTTTGCAGAGACCAGAGTCAGTTAAGGTTGACGCACAGGACATTAATGGTACAAGGTTTGAGATAAGCTTGTCTGCTCTTCCAGCACGAGTCTTCCAACATGAATTTGATCACCTACAGGTGTTTCTTCATTTCTATAAATGCAGGATCTGTTTTAACTGTACCTTCCCAAAAATTACTGTTGTTTGGGGTTAGCAGGCTCTCCTGCTCATACATTTTCCCATTGCATTTACTTTTTTTTTTTCGCATTTACCTTTTATTCAGAAAATATGTTCTATATGTCTTTCCAGTTGCAGTAACTAGACACTGAGCAGTGTAATATAAAAAAAGTAAGAACCCGATAGGCTCGAGTTCAGGAGTCTTCCCTGGTCGATTCTTTTTATAAGACTACTTAACAGTGCTACTGGTTGAATTCAGATATCTGTAGTACTGTATAGTGTGTATGCAGTCTTTGATGAATATTCATTACATGAATGCACAATTTGCTTTAAATACAAGACCTAGTTCCCGTAAGACATTTCTTTTTAACTTAGGTCAGCAATGTGCAGGGAGTTCTTTTCTTTGACAAAATGACTGACGAAGTCCTGGACACCATTCGTGAAAAATTAGTGGTTAGTGGATGATTGTTAAAGTTGGAATAAACATCTGGCAGGTGTTGCACCAAGTATTTTGTTGCTCATCTTTGTAACTGATTTTACAGGCGCTAGAAAAGAAATATGAAGATAGGACTGGGTTGCCAACCCCTGAAAGCATAAATACACGAAAAATAAAGAAGGCTGCTGTTGGATTTGGCAAATCATGAATTTACTGGGATCTATGAAATCTTCTCAGGTTTCTGATGCCTTACCTTTATTTCATTTGCTTATTGTTTTACTGCATGTGCTTTACACTTGCTACTTGATGTATGCAGTATTTGTATGATGAAGCACAAAATGGGATTGCCAGCTTTTGCTGAACTTTGGTATATGCCATTAATTTAGACACTTGTGCTTTGTGAAACTAGCCAAAAGTGTGGCCTCTGAGGTTTATCCTTGTACTGATACTGCTCTGTTTAGGAATGATAGGGTTACCACAGAAATTTGTATGGAAAAAGAACTGTTAAGTACATTTGATCAAATATTGAACACCAAGTTTGTCGTTTAACACTTGGGTTGTTGTAGTTCAGTGTGGAGAAAAACAACTCAAGAGAAGTTCCATAAGTTCCCCAGCA</genome_strand>
        <mrna_strand>ACGAAGGACAAAATTAGTAATATTTGCATCTGTAGAGGTGAAATTGTCCGTTTTGTTGTGTGGCAAATGGCAATGGCTGCCGCAAGTTGGGCATCTTCTTCTTCGTTCACTCGCTTTCTCCGGCCTCTCCTCAGTCGGAACTCGTCTCCCTCCCCTATCAGTTACAGTCTTCATCGATATAAATCAGCTAACTGTTTATTTTTCTCCGCAAGCAGTAATAAACCTCCAAAATTAGCTGTTTATGCTCAAGCTAGGCGAGTTTTATCTTCCAAAACCAAAGGAGATGAAATAGCAACTC..............................................................................................CTGCTGACTTGAGCTTCGTGGTTCCATTGAAAATTGTGGAGTATCCAGACCCGATTTTAAGAGCGAAGAATAAGAGGATTGACAATTTTGACGCTAATTTGAAGAAGTTAGTTGATGAAATGTTCGATATTATGTACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGATGGCATTGGGCTGTCTGCACCACAAGTTGGAATGAATGTTCAACTAATGGTATTTAATGCAGCCGGTGAACGTGGAGAGGGGGAGGAGATTGTTCTCGTCAATCCACGTGTCAGTAGATATTCTAGGAGGATTATACCTTATGAAGAAGGTTGCTTATCTTTTCCAATGATACATGGTGATGTTAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCAGAGTCAGTTAAGGTTGACGCACAGGACATTAATGGTACAAGGTTTGAGATAAGCTTGTCTGCTCTTCCAGCACGAGTCTTCCAACATGAATTTGATCACCTACAG............................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTTCTTTTCTTTGACAAAATGACTGACGAAGTCCTGGACACCATTCGTGAAAAATTAGTG.........................................................................................GCGCTAGAAAAGAAATATGAAGATAGGACTGGGTTGCCAACCCCTGAAAGCATAAATACACGAAAAATAAAGAAGGCTGCTGTTGGATTTGGCAAATCATGAATTTACTGGGATCTATGAAATCTTCTCAG...............................................................................TATTTGTATGATGAAGCACAAAATGGGATTGCCAGCTTTTGCTGAACTTTGGTATATGCCATTAATTTAGACACTTGTGCTTTGTGAAACTAGCCAAAAGTGTGGCCTCTGAGGTTTATCCTTGTACTGATACTGCTCTGTTTAGGAATGATAGGGTTACCACAGAAATTTGTATGGAAAAAGAACTGTTAAGTACATTTGATCAAATATTGAACACCAAGTTTGTCGTTTAACACTTGGGTTGTTGTAGTTCAGTGTGGAGAAAAACAACTCAAGAGAAGTTCCATAAGTTCCCCAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U596444" ref_strand="+" ref_description="SGN-U596444 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|17433052|sp|Q9FV54|DEFC_SOLLC (e_value=5e-42) RecName:; (*ATH) AT5G14660.2 (e_value=1e-17)  Symbol: None | peptide deformylase, chloroplast / polypeptide deformylase 1B (PDF1B), identical to SP:Q9FUZ2 Peptide deformylase, chloroplast precursor (EC 3.5.1.88) (PDF) (Polypeptide deformylase) {Arabidopsis thaliana}; supporting cDNA gi:11320965... ; (*SWP) sp|Q9FV54|DEFC_SOLLC (e_value=4e-43) Peptide deformylase, chloroplastic OS=Solanum lycopersicum GN=PDF1B; ">
      <seq>ttgcatctgtagaggtgaaattgtccgttttgttgtgtggcaaatggcaatggctgccgcaagttgggcatcttcttcttcgttcactcgctttctccggcctctcctcagtcggaactcgtctccctcccctatcagttacagtcttcatcgatataaatcagctaactgtttatttttctccgcaagcagtaataaacctccaaaattagctgtttatgctcaagctaggcgagttttatcttccaaaaccaaaggagatgaaatagcaactcctgctgacttgagcttcgtggttccattgaaaattgtggagtatccagacccgattttaagagcgaagaataagaggattgacaattttgacgctaatttgaagaagttagttgatgaaatgttcgatattatgtacaagtgagtccatccgtttcttacaatccataactacttgtccttttgagttttcataacttattttaatgcaaaaatcagttgttcaatcagtaaactggataactcaatctattggagcttcgcaaagcatgactgatcccaaacctagatataggaagagattattcttggtggaggtctaattatgttgaaaataaaacaaaaatagttatggcgacacaaatttagaataatgnaatccgactagtttggaattgaggtgtaactgactgatttattgaattaanaatagatggattttgacncaaatttagaatagnnnntccnactagttgggaatngnnngnantgactgattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0123B22.1" temp_strand="+" temp_description="C02SLe0123B22.1  AC215465.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0123B22 sequenced_by:kribb upload_account_name:korea">
        <position start="131978" stop="133404"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132278" g_stop="132552" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="275" r_length="275" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="132553" i_stop="132646" i_length="94">
            <donor d_prob="0.947" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132647" g_stop="133147" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="773" r_length="498" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0123B22.1" gen_strand="+" ref_id="SGN-U596444" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>776</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0123B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U596444" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="132278" e_stop="132552"/>
          <exon e_start="132647" e_stop="133147"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCATCTGTAGAGGTGAAATTGTCCGTTTTGTTGTGTGGCAAATGGCAATGGCTGCCGCAAGTTGGGCATCTTCTTCTTCGTTCACTCGCTTTCTCCGGCCTCTCCTCAGTCGGAACTCGTCTCCCTCCCCTATCAGTTACAGTCTTCATCGATATAAATCAGCTAACTGTTTATTTTTCTCCGCAAGCAGTAATAAACCTCCAAAATTAGCTGTTTATGCTCAAGCTAGGCGAGTTTTATCTTCCAAAACCAAAGGAGATGAAATAGCAACTCGTAAGCATCCTTCTAGATTCTGACCTAAAAATCAATCTATTTGTGGTCAATTTTCTTTTTCGCAGATTGAAATTCTTCTTTTTGTGTGTGGTAGCTGCTGACTTGAGCTTCGTGGTTCCATTGAAAATTGTGGAGTATCCAGACCCGATTTTAAGAGCGAAGAATAAGAGGATTGACAATTTTGACGCTAATTTGAAGAAGTTAGTTGATGAAATGTTCGATATTATGTACAAGTGAGTCCATCCGTTTCTTACAATCCATAACTACTTGTCCTTTTGAGTTTTCATAACTTATTTTAATGCAAAAATCAGTTGTTCAATCAGTAAACTGGATAACTCAATCTATTGGAGCTTCGCAAAGCATGACTGATCCCAAACCTAGATATAGGAAGAGATTATTCTTGGTGGAGGTCTAATTATGTTGAAAATAAAACAAAAATAGTTATGGCGACACAAATTTAGAATAATGGAATCCGACTAGTTTGGAATTGAGGTGTAACTGACTGATTTATTGAATTAAGAATAGATGGATTTTGACACAAATTTAGAATAGTGGAATCCGACTAGTTGGGAATTGAGGTGTAACTGACTGATTT</genome_strand>
        <mrna_strand>TTGCATCTGTAGAGGTGAAATTGTCCGTTTTGTTGTGTGGCAAATGGCAATGGCTGCCGCAAGTTGGGCATCTTCTTCTTCGTTCACTCGCTTTCTCCGGCCTCTCCTCAGTCGGAACTCGTCTCCCTCCCCTATCAGTTACAGTCTTCATCGATATAAATCAGCTAACTGTTTATTTTTCTCCGCAAGCAGTAATAAACCTCCAAAATTAGCTGTTTATGCTCAAGCTAGGCGAGTTTTATCTTCCAAAACCAAAGGAGATGAAATAGCAACTC..............................................................................................CTGCTGACTTGAGCTTCGTGGTTCCATTGAAAATTGTGGAGTATCCAGACCCGATTTTAAGAGCGAAGAATAAGAGGATTGACAATTTTGACGCTAATTTGAAGAAGTTAGTTGATGAAATGTTCGATATTATGTACAAGTGAGTCCATCCGTTTCTTACAATCCATAACTACTTGTCCTTTTGAGTTTTCATAACTTATTTTAATGCAAAAATCAGTTGTTCAATCAGTAAACTGGATAACTCAATCTATTGGAGCTTCGCAAAGCATGACTGATCCCAAACCTAGATATAGGAAGAGATTATTCTTGGTGGAGGTCTAATTATGTTGAAAATAAAACAAAAATAGTTATGGCGACACAAATTTAGAATAATGNAATCCGACTAGTTTGGAATTGAGGTGTAACTGACTGATTTATTGAATTAANAATAGATGGATTTTGACNCAAATTTAGAATAG-NNNNTCCNACTAGTTGGGAATNG-NNNG-NANTGACTGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U565238" ref_strand="+" ref_description="SGN-U565238 Tomato 200607#2 [2 ESTs aligned] (*GB) gi|17433052|sp|Q9FV54|DEFC_SOLLC (e_value=2e-19) RecName:; (*ATH) AT5G14660.2 (e_value=2e-13)  Symbol: None | peptide deformylase, chloroplast / polypeptide deformylase 1B (PDF1B), identical to SP:Q9FUZ2 Peptide deformylase, chloroplast precursor (EC 3.5.1.88) (PDF) (Polypeptide deformylase) {Arabidopsis thaliana}; supporting cDNA gi:11320965... ; (*SWP) sp|Q9FV54|DEFC_SOLLC (e_value=1e-20) Peptide deformylase, chloroplastic OS=Solanum lycopersicum GN=PDF1B; ">
      <seq>gacaaaatgactgacgaagtcctggacaccattcgtgaaaaattagtggcgctagaaaagaaatatgaagataggactgggttgccaacccctgaaagcataaatacacgaaaaataaagaaggctgctgttggatttggcaaatcatgaatttactgggatctatgaaatcttctcaggtttctgatgccttacctttatttcatttgcttattgttttactgcatgtgctttacacttgctacttgatgtatgcagtatttgtatgatgaagcacaaaatgggattgccagcttttgctgaactttggtatatgccattaatttagacacttgtgctttgtgaaactagccaaaagtgtggcctctgaggtttatccttgtactgatactgctctgtttaggaatgatagggttaccacagaaatttgtatggaaaaagaactgttaagtacatttaatcaaatattgaacaccaagtttgtcgtttaacacttgggttgttgtagttcagtgtggagaaaaacaactcaagagaagttccataagttccccagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0123B22.1" temp_strand="+" temp_description="C02SLe0123B22.1  AC215465.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0123B22 sequenced_by:kribb upload_account_name:korea">
        <position start="134759" stop="136004"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="135059" g_stop="135106" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="135107" i_stop="135195" i_length="89">
            <donor d_prob="0.537" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="135196" g_stop="135704" g_length="509"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="557" r_length="509" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0123B22.1" gen_strand="+" ref_id="SGN-U565238" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0123B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U565238" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="135059" e_stop="135106"/>
          <exon e_start="135196" e_stop="135704"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACAAAATGACTGACGAAGTCCTGGACACCATTCGTGAAAAATTAGTGGTTAGTGGATGATTGTTAAAGTTGGAATAAACATCTGGCAGGTGTTGCACCAAGTATTTTGTTGCTCATCTTTGTAACTGATTTTACAGGCGCTAGAAAAGAAATATGAAGATAGGACTGGGTTGCCAACCCCTGAAAGCATAAATACACGAAAAATAAAGAAGGCTGCTGTTGGATTTGGCAAATCATGAATTTACTGGGATCTATGAAATCTTCTCAGGTTTCTGATGCCTTACCTTTATTTCATTTGCTTATTGTTTTACTGCATGTGCTTTACACTTGCTACTTGATGTATGCAGTATTTGTATGATGAAGCACAAAATGGGATTGCCAGCTTTTGCTGAACTTTGGTATATGCCATTAATTTAGACACTTGTGCTTTGTGAAACTAGCCAAAAGTGTGGCCTCTGAGGTTTATCCTTGTACTGATACTGCTCTGTTTAGGAATGATAGGGTTACCACAGAAATTTGTATGGAAAAAGAACTGTTAAGTACATTTGATCAAATATTGAACACCAAGTTTGTCGTTTAACACTTGGGTTGTTGTAGTTCAGTGTGGAGAAAAACAACTCAAGAGAAGTTCCATAAGTTCCCCAGC</genome_strand>
        <mrna_strand>GACAAAATGACTGACGAAGTCCTGGACACCATTCGTGAAAAATTAGTG.........................................................................................GCGCTAGAAAAGAAATATGAAGATAGGACTGGGTTGCCAACCCCTGAAAGCATAAATACACGAAAAATAAAGAAGGCTGCTGTTGGATTTGGCAAATCATGAATTTACTGGGATCTATGAAATCTTCTCAGGTTTCTGATGCCTTACCTTTATTTCATTTGCTTATTGTTTTACTGCATGTGCTTTACACTTGCTACTTGATGTATGCAGTATTTGTATGATGAAGCACAAAATGGGATTGCCAGCTTTTGCTGAACTTTGGTATATGCCATTAATTTAGACACTTGTGCTTTGTGAAACTAGCCAAAAGTGTGGCCTCTGAGGTTTATCCTTGTACTGATACTGCTCTGTTTAGGAATGATAGGGTTACCACAGAAATTTGTATGGAAAAAGAACTGTTAAGTACATTTAATCAAATATTGAACACCAAGTTTGTCGTTTAACACTTGGGTTGTTGTAGTTCAGTGTGGAGAAAAACAACTCAAGAGAAGTTCCATAAGTTCCCCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U581960" ref_strand="+" ref_description="SGN-U581960 Tomato 200607#2 [37 ESTs aligned] (*GB) gi|619894|emb|CAA58594.1| (e_value=0) Petunia Shaggy kinase 4 [Petunia x hybrida]; (*ATH) AT5G14640.1 (e_value=0) | Symbol: None | protein kinase family protein, similar to glycogen synthase kinase-3 homolog MsK-3 SP:P51139 from (Medicago sativa); contains Pfam profile PF00069: Protein kinase domain | chr5:4719087-4722282 REVERSE | Aliases: T15N1.130, T15N1_130; (*SWP) sp|Q8VZD5|KSG5_ARATH (e_value=0) Shaggy-related protein kinase epsilon OS=Arabidopsis thaliana GN=ASK5; ">
      <seq>gaagtgagaaaaatgaaagaagagcagcattgcagaagtctatagccaagaacctgaaaacttggccatacgccattttcacttccactttatttcttccgcgcttagggttttgctgtttcactcacaatttccatcgccaatgcgagcaattcacttcaccgctgcaggttttgagaagcagacaatctgtcacttgagtcataaccatttatcagtactataaggaagtttatttgttattcagtgacatggcttcgggcagtattatgtcttcagcagctggcaaacctattactgatgttgtgcttattgacaacctacctaaagaaataaatgcaatgaagatcaacgatgacaaagaaggaaaggaaatggaagccgctgttgtggatgggaatggaactgaaacaggtcacatcattgtgacgactattggggggaaaaatggtcagccaaagcagaccataagttacatggcggagcgtgtagttggacagggttcctttggaattgtgttccaggccaaatgccttgaaacaggagaaaccgtggcaataaaaaaggtcttgcaggacaagagatacaagaatcgggaattgcagactatgcgacttcttgatcatcctagtattgtttcactgaagcactgcttcttttcgaccacagaaaaggatgagctttatctaaatttggttctagaatttgtacctgaaactctctaccgtgtgttaagacattacagcaaagcaaaccaacggatgcctattatatatgtcaaactgtacacatatcagatatttagagctttggcttacatacatgggataggagtctgccacagggacatcaaacctcagaatttactggtcaacccccacacacatcagcttaagctttgtgattttgggagtgcaaaagtcctggtcaaaggcgagccaaacatttcatatatctgttcacgttattatcgtgcgcccgaactaatattcggagcaactgagtacaccaatgcaattgacatttggtctgtgggttgtgtcctagctgaactgcttcttggacagcccctctttcctggtgagagtggtgtagatcagctcgtcgaaataatcaaggttcttggaacaccaactcgtgaagaaatcaagtgtatgaatccaaattacaccgaatttaagttcccgcaaatcaaagctcacccctggcacaagatttttcacaagcggatgcctcctgaagctgtagatcttgtgataaggcttctacagtattctccaaatctgaggtgcacagcgttggaagctcttggtcacgctttctttgatgagctccgtgaccctaatgctcgtcctcctaatggtcgtccattgccatctctcttcaacttcagacctcaagagctgaaaggagcgtcttcagaactcttaaacaaactgttaccagaacatgctaaaaagcagtgtcccttacttggagtctagtctgtaagaatttgtttatcttttgtgaacttgatcctatttattatcactgttcagagaattaggaaaaccttttgacatctccattagtctattatataccacttcttcgccaattatgtaatcagctgattccccccgtactctacttaattatttgtaaatagtaatgtattacgggatttaccttattccttatcgacaattttatttttgtatgcacatcttagtttgcattttttactgcattttggtcgattctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0123B22.1" temp_strand="+" temp_description="C02SLe0123B22.1  AC215465.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0123B22 sequenced_by:kribb upload_account_name:korea">
        <position start="136470" stop="144243"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136769" g_stop="136939" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="136940" i_stop="137657" i_length="718">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="137658" g_stop="137858" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="371" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="137859" i_stop="137946" i_length="88">
            <donor d_prob="0.867" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="137947" g_stop="138039" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="464" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="138040" i_stop="140203" i_length="2164">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="140204" g_stop="140263" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="524" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="140264" i_stop="140363" i_length="100">
            <donor d_prob="0.927" d_score="1.00"/>
            <acceptor a_prob="0.874" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="140364" g_stop="140636" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="525" r_stop="797" r_length="273" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="140637" i_stop="141640" i_length="1004">
            <donor d_prob="0.792" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="141641" g_stop="141712" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="798" r_stop="869" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="141713" i_stop="141784" i_length="72">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="141785" g_stop="141841" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="870" r_stop="926" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="141842" i_stop="142555" i_length="714">
            <donor d_prob="0.823" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="142556" g_stop="142696" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="927" r_stop="1067" r_length="141" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="142697" i_stop="142794" i_length="98">
            <donor d_prob="0.785" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="142795" g_stop="142845" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1068" r_stop="1118" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="142846" i_stop="142917" i_length="72">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="142918" g_stop="143013" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1119" r_stop="1214" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="143014" i_stop="143118" i_length="105">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.591" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="143119" g_stop="143202" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1215" r_stop="1298" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="143203" i_stop="143388" i_length="186">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="143389" g_stop="143491" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1299" r_stop="1401" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="143492" i_stop="143595" i_length="104">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="143596" g_stop="143943" g_length="348"/>
          <reference_exon_boundary r_type="cDNA" r_start="1402" r_stop="1749" r_length="348" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0123B22.1" gen_strand="+" ref_id="SGN-U581960" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1750</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0123B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U581960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="136769" e_stop="136939"/>
          <exon e_start="137658" e_stop="137858"/>
          <exon e_start="137947" e_stop="138039"/>
          <exon e_start="140204" e_stop="140263"/>
          <exon e_start="140364" e_stop="140636"/>
          <exon e_start="141641" e_stop="141712"/>
          <exon e_start="141785" e_stop="141841"/>
          <exon e_start="142556" e_stop="142696"/>
          <exon e_start="142795" e_stop="142845"/>
          <exon e_start="142918" e_stop="143013"/>
          <exon e_start="143119" e_stop="143202"/>
          <exon e_start="143389" e_stop="143491"/>
          <exon e_start="143596" e_stop="143943"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGTGAGAAAAATGAAAGAAGAGCAGCATTGCAGAAGTCTATAGCCAAGAACCTGAAAACTTGGCCATACGCCATTTTCACTTCCACTTTATTTCTTCCGCGCTTAGGGTTTTGCTGTTTCACTCACAATTTTCCATCGCCAATGCGAGCAATTCACTTCACCGCTGCAGGTACTCTTTTGGTTTATGCAATAATCATAAATATGAATAATTGATCGCATGCTTCCTATGAAGGTTCTTAATGTTAAAAAGATGGCTGCAATTTTGTTGAAACCTATGTTTTTCTTCCAATTAAAAAATTTCGGAGGCTGTTATAGAAGTTCTTTTTAAGCGTCCAGGAGTTCTTTGAACAGTGGTAGCTGATTTTGCGATCTTCTAGAGACTTACTTGATTAATTTGAGTACTTAATCACGTATATGAACTAAGAAACCGGATTTCAGGATGATTAACTTTTGAAAATTAAATATAACATACTGCTCTATGTTTGCAACAAGCACAAAACTTCTGTTTGTTGCTTGTTGATAGTTGTCTCAGTATTAATGCAACAACTTCTGTTTGACTTATTCACTTCTCCTATCAAAATGTTAATAGAGTCTTGGTAGCACTAATAATATTTCATGTCTTTATATGTGGGAGTTATGCCTTATCATCATAGATATGGTCATATGGCGCACATGAACATTAAATATGTCAAGAAAGTGGTAGCACGCCTTTGACATGTTAACTTAACATCAAGTGGATGGGGTCCTGCTTGGATCAGTAATGTTCCTTGTTATATAAATGTCTACATACTGCAATTTTTGGATTCTTTTATCTCCTTTGATACAACAGTGAATGTAAGTGCGGCATCACCGGCGTCCTGTTTGAACTATGTATCTTTGTGATTCAGGTTTTGAGAAGCAGACAATCTGTCACTTGAGTCATAACCATTTATCAGTACTATAAGGAAGTTTATTTGTTATTCAGTGACATGGCTTCGGGCAGTATTATGTCTTCAGCAGCTGGCAAACCTATTACTGATGTTGTGCTTATTGACAACCTACCTAAAGAAATAAATGCAATGAAGATCAACGATGACAAAGAAGGAAAGGTTGTTCTTGGAAATAGGATGCATACTCTTTATCTAATTTCTTTTTTCCTTGTCTGCCTTAGCAATTCTCACTGTGATATCCTGATAGGAAATGGAAGCCGCTGTTGTGGATGGGAATGGAACTGAAACAGGTCACATCATTGTGACGACTATTGGGGGGAAAAATGGTCAGCCAAAGCAGGTGACATTTTTAATCATTTGATTCAACCTCGAAAATGTTATTTTACACTTGTAACTTATCTTTTATTGTTGTGCCTGTACCAAATACTAACATATCCAAAGGATAAGAATTTTCATGTTTGAGATTAAATGGCATTGATCTCGTGGATTTCATGAAATATCCCTTTGCTTTAGTTTCATTTTGGTTCTGAAATCAGTAAATAAAACTCAATCTATACTACGGCTGGTAATTTATTTATGGATCTGATGAGCAAATCTTTTCTCAATCAGTTTTGTTCCGGCTATGGAAATCAGAAAGTCTGATAATCCTGATTTTCATATTATCTTTTCTTTCACTTGTGATGTAACATTTTTTTTTTTTGAAACATGCAACTTTTTCACTTGTGATGTAACATAGGCAATTGAAAGAAAGACCTGTTCTTGTATTTTCCTTCGCGTCATTGCTTTATCCTCCTTTATCAATTTAGTAGATGTTTTGTACTCGAGTACCAAGTATTTTGCCTCTTTTTTTTTTTTTTTTACAAGGGAAACCCGAAGTCGCTACCCTTTGGGTGCGTAAGGGTAAAACCCCTGCTCCTACCCAATAGCTCGCAAACCACATAGGAGAGGTAACCCACACTAGGCTTGCCAAGCCTAGTGCGACGAGCTCGGCCTAGAAGGCAAAAACCCTTACTTTCGCCTAGGGGTTTCGAACTTGAGACCTCCAACATGGAAATCTCAAGCTCAAACCACTAGGTCACCCCGAAGGGTAAGTATTTTGCCTCTTTTATTTTTTTTATTCTTTTTGATTTTTGAAACTAATAATAATAAGTCAAGAACAAATCGTAACTGTCTGATAGAGATGTTAAGCTATCGTACTAAACAAGAAGTAACTTTTGGCTAAAATGGTTCGGGACATCTTTGTAATTACCTCTTTTTCTTCAATTTCTTTTGACTTGCCAGGTACTGGTAATCGAGAAATTTTATTTTGTGTTTCACATCACTTCCATGTTTTCTATGAGGCACTTTAATTGCTTAACAAGTGACTTGTTCTTTTACCATTTCTTTGGTAATATAAAAGTTTCCAAAATAAGGCACTCTACTAGGACCCAAAAATTGCATGATATGCATACCCGTAGACGTGAATAACACTTGTTTTTCTCTTTTTCATGGCGGATATGGAGTTGTATTACTGGTCAACCTTACTTTAATATGCTTATGGTTGACGGTGCTTTGTATGAACTTACATGGCTTTTCTACTTATGCTTGTATATTTTCCATTGCATAATTTTGTTTCCCTTTTCTCTGATTAGGCATGGGATTATCCAAAATTCAATTTGTATGTTTTTTCTTTCCTTCCAATAAATTCATTGAATAAGTAGAACTATATTACTGTAAAAGCCTTATATCAAATTAATCTGCTGCATCATAACTCAGAATAACTTTGATAAATTTTGCTTTGTTTGGTGCTTAATTTAGAAAAGCTTTGCATTGCTTTTTCTGTTTCAATCTTTAATCAAACAAATTTAACCACAAGTGCACTTGTCAAGTAATTACAGCGTCTCACATGACTTATGTTGGTTATGTGAGACATAAAGTCAAGCTTCTCGCTGTAATCTAACAATCTCTTTTCTTTGTCCTCTCAAAAAAGGAAGCAGGCGTTAATATCAACTCCATACTTTCAGGGAAGTTTTAATGACATGAACTTAGTTAATCTTCTCATACCATATTGACATGGTGCTTTCCAGATGTACAAAGGGCTTATTTCCTGAACTTTAGAAATTACAAAATATTGTTCCCTGTAAAGTTCAGAATTGGACCTAACATGGGCGTCTAATGACCGGGATGACTTTCCTTGACTTTAACTTGATAGTATCTTTAAAGAGTCGGCGAACACTTTGGTCTCGGTCTTATTAAGGATGTAGCTTATAATAGTTAGGGATGAGTGCTAATTAGGCGAGGTTACACGGTCCTACTCAACATAATGTTGTATTTCTAGCCTGGGTTGATAATTGAAATGCTCTTCATTACCATGTCTTCGAGACCGGCACTGTTTGAGTGATGACCCATCCATACTTCACCCTACAAATAAATAAATCTCAACTGAGCAAGTTCTTTTAAATATACATGCTGATTGTAATCTTTGTGTTAAAAACTTTTTTGCTAATGTTTTCTTTGACATTCAGACCATAAGTTACATGGCGGAGCGTGTAGTTGGACAGGGTTCCTTTGGAATTGTGTTCCAGGTATAAGCTGTTCATTTGTCACAGATAATCACTGCCATAATCAAGAATCTTTACCCCCTTCACTAAATCAATTGTCATTGATTTCAAAGCTAAATTGCAGGCCAAATGCCTTGAAACAGGAGAAACCGTGGCAATAAAAAAGGTCTTGCAGGACAAGAGATACAAGAATCGGGAATTGCAGACTATGCGACTTCTTGATCATCCTAGTATTGTTTCACTGAAGCACTGCTTCTTTTCGACCACAGAAAAGGATGAGCTTTATCTAAATTTGGTTCTAGAATTTGTACCTGAAACTCTCTACCGTGTGTTAAGACATTACAGCAAAGCAAACCAACGGATGCCTATTATATATGTCAAACTGTACACATATCAGGTATTCCATTTGAGTACATGTGCAAGTTCCTCTCATTGTACATAGAAAGAAATGAGCATAGGACGAATTTCATGTATGTTTCCTATAATTTAGCAAAACTGAATGGACCTGGCCCTATAGCTTATGATGATTGTGACTTCTGCTCGAGTGTGCCACAAGTTTCCATGGAAACCTCCTTTGCCTTTAACTCCCTTCATTGTCTTCAAATTGTTATGGTGTATGTAAAATTCTAAATGTTGTATCCTGTATCAAAATATTATGTCAATGCTAGCCTCTTCGATGTCAACCCTACTACAATATTTCAAGTTATAAGGCACCAAATCCTTCATGCTTAAATAACGAGAAATAGTATAGAAGGTTATCTTCGACCAGGGGAGCTAATAATTCTACCCAATTAGTGTTCTTTTCTATTTTCAGAAACAATGTAGTATTTATCTCATTGTCAAAATGTATAAGAAATAAATGAGAAAGGTATTTCAGTAAAATAATCTTCAAAACTAATGACTTGCTCTCAGTACCAGATTGGAGATGTAACTTTATTTTTTTTAAATGAAAGGAAGTTCATTCAGTTTCGACTAAACCACATATGGAGGAGGTTTGACTAATTCACGTTCTATGTCATTTTTCCATATACCGGTTTAATGTGATATTAATTGTTTTTTGGATATTTTCCTACTTCCCTTTCCAATCCCTTTGTCCTTTATGCAACCCTAAACTCAGATTGTGGCCTAAACCGTTGACCTCATGTGCAGTGGTAAAGGTTCTTCCATAGTTGTAATATCTTCAAATAACAAGTTCTCTGTTCTAGTAATAACTGTTAAAGATGATAATTTTTAGTGTTGTTGCGCATCTTGCACAGAGTAAATTTTGCATCATTTGTTTGTGGTGATTATGACATAGTTACTGTTGTTACTGTTTATGGCTAGTAGCAACACCTCTTCTTTACACCAACCTTAGCATATCTTTGTTGTGACCTATAGTTGGTTGATGATATACCTTAACAGATATTTAGAGCTTTGGCTTACATACATGGGATAGGAGTCTGCCACAGGGACATCAAACCTCAGAATTTACTGGTTTGTACTTGAAGCTTAAACTCAATCAACTAAAAACATTGTGATATTTACTAATGCAATTTGCTATGGCAGGTCAACCCCCACACACATCAGCTTAAGCTTTGTGATTTTGGGAGTGCAAAAGTCCTGGTAATTTTCCTGATAGCTTGCAAAAGTCCTGTTATTACTTCTCAAGTCTGAGACCTAAGTTCGACTTTCACTTTCTGCTTCTTGTCGCTACAAAGTTTAGGAACAGATGTGATCATTTGATTGTGACTTGTTTGGAAAATTAGAACACAAATATTCTTTTTATTCATGTTTCCATGCATGTGAAACACTACAAGTTGTCATGATATAACTGTAAGTAGTTGATGACGTCTATCAGTTGTAGTTGTGCCTGCAGAAGAGGATTTCTTAAAATGAGTTATACTGGACGCTAAAGACAGTTCTGTCATATTTTGTAAGATAATTCAGGAATTGCTTGTGGTTATGTATTATCATAAGTATGTCACATTTATAATATGTTAGTACAAGAATTAGATGAAGTTGTATGATATCTTATTATGTCCATTCTCAGAAATTCAAGAAATGGAAGTGTTCCAGCATATTGTATGATCACTTCTTTTTATTTTTATGTAGCTGAAGATGTTCTTGTGAATTAGATATTTTGCTTGTTGGGATTTATCAAATCAAAAAAACTGATGAAGAAGTACCTTTTATAGCTCAACAATATGAAAATACTTTGATTCCTTTTCTCGACTTTATTCATCTTCCATATGTGATTGGTGGGTGGAATGATTGTCTTAGTCTTATCTAGTGATCTTATTTAAATAGTTCATCCTCATATTTTGGCCATCCTAACAGGTCAAAGGCGAGCCAAACATTTCATATATCTGTTCACGTTATTATCGTGCGCCCGAACTAATATTCGGAGCAACTGAGTACACCAATGCAATTGACATTTGGTCTGTGGGTTGTGTCCTAGCTGAACTGCTTCTTGGACAGGTTGTATTTATTGTGGAGTTCAATTCCTTTATTGAGAAAAAAAAATACTGTAATGATTGATTGTTTCACGCTAATCTTTTCTCTTCCAAAACTTGTAGCCCCTCTTTCCTGGTGAGAGTGGTGTAGATCAGCTCGTCGAAATAATCAAGGTATCCATCTATTTGATTCAATGATGCCATCTTTAGTTTGCACAATTCAATAAATCAAAATGTCCTCTTTAGGTTCTTGGAACACCAACTCGTGAAGAAATCAAGTGTATGAATCCAAATTACACCGAATTTAAGTTCCCGCAAATCAAAGCTCACCCCTGGCACAAGGTAAGAACCCTGAGCTATAGTTCTGTGTAGAAGATACATTTTCTGATGCATTTCACGGCATGCATGCACATCAAGAAACTCATGACCGTACTCTGCATTGTACAGATTTTTCACAAGCGGATGCCTCCTGAAGCTGTAGATCTTGTGATAAGGCTTCTACAGTATTCTCCAAATCTGAGGTGCACAGCGGTGAGTGTACCAAGTTCTCTCCCTAATTTTTTTCCTTATCCTCCAGTTCAAACTCAGTGTGGTGAGGGCAAAAGAAAGTAGTACTTGTTGAAAATTCCATATCATATTTTAGGCAGCAATCATTTGTGTCGGGAAACTTTATTATATTGTGATGCTTTTCTGTGATCTATTTGATTCATTTTGCAGTTGGAAGCTCTTGGTCACGCTTTCTTTGATGAGCTCCGTGACCCTAATGCTCGTCCTCCTAATGGTCGTCCATTGCCATCTCTCTTCAACTTCAGACCTCAAGGTTTAATTTTTATCTTCTCCTCCAGTTTTGTTAATTGACTTCTCCACCCCACTCATATTCATATAGTAGTTGTTTTTCTTATTATGAGATTATGTCATTTGCAGAGCTGAAAGGAGCGTCTTCAGAACTCTTAAACAAACTGTTACCAGAACATGCTAAAAAGCAGTGTCCCTTACTTGGAGTCTAGTCTGTAAGAATTTGTTTATCTTTTGTGAACTTGATCCTATTTATTATCACTGTTCAGAGAATTAGGAAAACCTTTTGACATCTCCATTAGTCTATTATATACCACTTCTTCGCCAATTATGTAATCAGCTGATTCCCCCCGTACTCTACTTAATTATTTGTAAATAGTAATGTATTACGGGATTTACCTTATTCCTTATCGACAATTTTATTTTTGTATGCACATCTTAGTTTGCATTTTTTACTGCATTTTGGTCGATTCTATT</genome_strand>
        <mrna_strand>GAAGTGAGAAAAATGAAAGAAGAGCAGCATTGCAGAAGTCTATAGCCAAGAACCTGAAAACTTGGCCATACGCCATTTTCACTTCCACTTTATTTCTTCCGCGCTTAGGGTTTTGCTGTTTCACTCACAA-TTTCCATCGCCAATGCGAGCAATTCACTTCACCGCTGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTGAGAAGCAGACAATCTGTCACTTGAGTCATAACCATTTATCAGTACTATAAGGAAGTTTATTTGTTATTCAGTGACATGGCTTCGGGCAGTATTATGTCTTCAGCAGCTGGCAAACCTATTACTGATGTTGTGCTTATTGACAACCTACCTAAAGAAATAAATGCAATGAAGATCAACGATGACAAAGAAGGAAAG........................................................................................GAAATGGAAGCCGCTGTTGTGGATGGGAATGGAACTGAAACAGGTCACATCATTGTGACGACTATTGGGGGGAAAAATGGTCAGCCAAAGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCATAAGTTACATGGCGGAGCGTGTAGTTGGACAGGGTTCCTTTGGAATTGTGTTCCAG....................................................................................................GCCAAATGCCTTGAAACAGGAGAAACCGTGGCAATAAAAAAGGTCTTGCAGGACAAGAGATACAAGAATCGGGAATTGCAGACTATGCGACTTCTTGATCATCCTAGTATTGTTTCACTGAAGCACTGCTTCTTTTCGACCACAGAAAAGGATGAGCTTTATCTAAATTTGGTTCTAGAATTTGTACCTGAAACTCTCTACCGTGTGTTAAGACATTACAGCAAAGCAAACCAACGGATGCCTATTATATATGTCAAACTGTACACATATCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTTAGAGCTTTGGCTTACATACATGGGATAGGAGTCTGCCACAGGGACATCAAACCTCAGAATTTACTG........................................................................GTCAACCCCCACACACATCAGCTTAAGCTTTGTGATTTTGGGAGTGCAAAAGTCCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAGGCGAGCCAAACATTTCATATATCTGTTCACGTTATTATCGTGCGCCCGAACTAATATTCGGAGCAACTGAGTACACCAATGCAATTGACATTTGGTCTGTGGGTTGTGTCCTAGCTGAACTGCTTCTTGGACAG..................................................................................................CCCCTCTTTCCTGGTGAGAGTGGTGTAGATCAGCTCGTCGAAATAATCAAG........................................................................GTTCTTGGAACACCAACTCGTGAAGAAATCAAGTGTATGAATCCAAATTACACCGAATTTAAGTTCCCGCAAATCAAAGCTCACCCCTGGCACAAG.........................................................................................................ATTTTTCACAAGCGGATGCCTCCTGAAGCTGTAGATCTTGTGATAAGGCTTCTACAGTATTCTCCAAATCTGAGGTGCACAGCG..........................................................................................................................................................................................TTGGAAGCTCTTGGTCACGCTTTCTTTGATGAGCTCCGTGACCCTAATGCTCGTCCTCCTAATGGTCGTCCATTGCCATCTCTCTTCAACTTCAGACCTCAAG........................................................................................................AGCTGAAAGGAGCGTCTTCAGAACTCTTAAACAAACTGTTACCAGAACATGCTAAAAAGCAGTGTCCCTTACTTGGAGTCTAGTCTGTAAGAATTTGTTTATCTTTTGTGAACTTGATCCTATTTATTATCACTGTTCAGAGAATTAGGAAAACCTTTTGACATCTCCATTAGTCTATTATATACCACTTCTTCGCCAATTATGTAATCAGCTGATTCCCCCCGTACTCTACTTAATTATTTGTAAATAGTAATGTATTACGGGATTTACCTTATTCCTTATCGACAATTTTATTTTTGTATGCACATCTTAGTTTGCATTTTTTACTGCATTTTGGTCGATTCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U562803" ref_strand="+" ref_description="SGN-U562803 Tomato 200607#2 [10 ESTs aligned] (*GB) gi|1169228|sp|P46942|DB10_NICSY (e_value=0) RNA helicase-like protein DB10; (*ATH) AT3G01540.2 (e_value=0)  Symbol: None | DEAD box RNA helicase (DRH1), identical to RNA helicase DRH1 GB:BAA28347 GI:3149952 (Arabidopsis thaliana); contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain | chr3:212758-216678 REV... ; (*SWP) sp|P46942|DB10_NICSY (e_value=0) ATP-dependent RNA helicase-like protein DB10 OS=Nicotiana sylvestris; ">
      <seq>gggtttctctctgcttctccgctgcttcactcataccttcgtatacttttatatataaattatttagcagagtgagtgggagggagaacggacgggagacatcgtcggaggtgggaatcgtttgtatcagcttcttttatcgtcatcggaaagactttgtcagaggtaattggatactgaagcttgagatggctgctactgcaactgcatcttctactggtccacgttatgcaccagaggatcccacccttcccaaaccttggaaaggcctagttgatggtaagactggatatctctatttttggaatccagagaccaatactacccaatacgagaagcctgttgctactcctcatgtgggtgctgcacaacataaatcctctgtatctgtaagttcatcagttgagaggccttctcaaagtcaatgttctgaccatggtgacaacagaggtaccaatggtgccttgagcaaactttcctctggagagggtattcagactgcaagagcaaatgagctttcccgcgatgaaacatctgcgcctaaaggttatagtgcttcagctgccgcgagtgacatatctccagatgcctatcgccgtcagcatgaaatttctgtctcaggaggtgatgtgcccccacctttcacatcgtttgaagctactgggtttccttcagagattttgagggagatacatcaagctgggtttcctgctccttccccaatacaggcacagtcctggcccattgcacttcagggccgtgacatagtagctgttgcaaagactgggtctggaaaaactctaggtttcttgcttcctggctttattcttctaaagcaacgtcggagtaatcctcaatcaggccctactattttggttctctcgccaacaagagaattagccacacagatacaagatgaagctgtgaagtttggtagatcttcaaagatttcttgcacgtgtttatatggaggcgccccaaaaggccctcagctacgagatctggataggggagttgatattgttgttgctacccctggtcgattgaatgatattttggagatgagaagagttaggctggatcaagtttcttacttggtgttagatgaagcggatcgtatgctggacatgggattcgaacctcagataaggaagattgtgaaggaggtgcctacgcgacggcagacactgatgtacacagcaacatggcctaaggaggtccgtagaattgcagctgatctattggttaatccagttcaggttaacattgggaatgttgatgagcttgttgcgaacaagtctattacacagtacattgaagtcttgtcatatatggataaacaaaagcgtctagaccagatcttgagatcccaagagcctggatcaaaaatcattatcttctgttcaactaagaaaatgtgtgaccaacttgctcgcaatcttacacacccatttggagctgctgctattcatggtgataaatctcagggtgagagggatcatgtactgagccagttccgcactggcaagtcccccgttcttgttgcaactgatgttgctgctcggggcttggatgtcaaagatatcagggtggtggtcaactatgattttccaactggtatagaggactatgtccacagaataggaagaactggtcgggctggtgcgactggtgaggcctacacattttttgttgaccaggatgctaaacatgcttcagatcttattaaagttttagaaggagcaaatcagcaagtgcctactgaactacgtgatatggcttctcgaggaggtggtatggggagggctaggcgtcaatgggattctggctcaggtggacgggaaggaggacatgggggacgttatgatgctggctacggtggacgagatggagcaaggggtggttgggaagccccttcatcagaaagaagtggacgtgtttatgactcggattcacgtgacagagatagacatggtcatggctctgatgctccagctagtttccatggtcgaagcttccatgaaactatgatgcagggttcacagagacgtgatagaagtaggagcagaagccctaatagaggttctggatggggtgacagaaaaggcagggagcgaagtcgtagccgtagtgctgaaagatctgagcggactcgtattcaagttccagtaggtggcagtttccatgaagccatgatgggcttcactagatcatcagctggtgattcccgaaaggactgggaaaaagaaagatcccaaggtgatgggaaatctggcgatggaccccgtgctaacaattgggaggagtaagaaggtaaaggagagcctgtgttgatttttgatgtgttgtaggaaatgctggaagaaaaaggggtcatttttgttaaactttaaccactacatgttttggcaaacagtgttctcggatagaagaagcttttagcgtattactggaaatagatagctgaaaatctgcaaatgggaagtttttgacggatgtaaatgtaaagtattttaccgtcaaactttgtttaatggaatcagcccacttctaagtgttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0123B22.1" temp_strand="+" temp_description="C02SLe0123B22.1  AC215465.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0123B22 sequenced_by:kribb upload_account_name:korea">
        <position start="146685" stop="157384"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146984" g_stop="147146" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="163" r_length="163" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="147147" i_stop="150684" i_length="3538">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="150685" g_stop="151018" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="497" r_length="334" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="151019" i_stop="151992" i_length="974">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="151993" g_stop="152115" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="620" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="152116" i_stop="152801" i_length="686">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="152802" g_stop="152870" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="621" r_stop="689" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="152871" i_stop="153383" i_length="513">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="153384" g_stop="153653" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="690" r_stop="959" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="153654" i_stop="154324" i_length="671">
            <donor d_prob="0.866" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="154325" g_stop="154675" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="960" r_stop="1310" r_length="351" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="154676" i_stop="154871" i_length="196">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="154872" g_stop="155149" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="1311" r_stop="1588" r_length="278" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="155150" i_stop="156029" i_length="880">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="156030" g_stop="156404" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="1589" r_stop="1963" r_length="375" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="156405" i_stop="156487" i_length="83">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="156488" g_stop="157084" g_length="597"/>
          <reference_exon_boundary r_type="cDNA" r_start="1964" r_stop="2560" r_length="597" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0123B22.1" gen_strand="+" ref_id="SGN-U562803" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2560</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0123B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U562803" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146984" e_stop="147146"/>
          <exon e_start="150685" e_stop="151018"/>
          <exon e_start="151993" e_stop="152115"/>
          <exon e_start="152802" e_stop="152870"/>
          <exon e_start="153384" e_stop="153653"/>
          <exon e_start="154325" e_stop="154675"/>
          <exon e_start="154872" e_stop="155149"/>
          <exon e_start="156030" e_stop="156404"/>
          <exon e_start="156488" e_stop="157084"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTTTCTCTCTGCTTCTCCGCTGCTTCACTCATACCTTTGTATACTTTTATATATAAATTATTTAGCAGAGTGAGTGGGAGGGAGAACGGACGGGAGACATCGTCGGAGGTGGGAATCGTTTGTATCAGCTTCTTTTATCGTCATCGGAAAGACTTTGTCAGGTATCATATCTCATTTATACTCGCGATGATTCAGATCTGAGTTGAACTTGCTAGGTTTGGTATTTGACCCCTGATATGTGTTGGTTAACCAGAATGCAGGGTTTTAGATGTTTTATTTTTTTGATTGTCTGGCCTCGATATTGTCGTTATTTTGAAGCTGAACTAGATAGGTTTTGCCTTGAGCTGAAGTTGTTTGGCATTTGAACCCTGTTATGTGTTAATAAATAAAAATTTAGGGTTTTAGATTTTTTTTATCTTTTTGATTGTTTGGCCTCGATGTTCTTGTCCTTTTGAAGTTGAACATGGTAGGTTTGGCCGAGAAGTTGAACTTGTTTGGCATTTGACCGCTGATATGTGTGATAAATAATAATGTAGGGTTTTAGATGGTTTTTAAAAATTGTTTGGCCCCGAAATTGTCATCCTTTGGAAGTTGAACTTGCTATGTTTGCCATTTGACACCTGCTATGTGTTAGTAAACGAGAATGTAGGGGTTTTAGAATGTTTCTTTTATTGTTTGGCCTTGAGTTGAACTTGTTTAGCATTTGACCTCTGCTGTGTGTTAAAAAATTAAAAATGTAGGGGTTTAGTTTTTTAAAATTGTTTGGCCTCGATGTTGTTGTCCTTTTGAAGTTGAACTTGATAGGTTTGACATTTGACCCCTCCTGTGTTTAATAAATAACCATGTAGGGTTTAGATAATTTTTCTTTCGATGTTTGGCCTTGAAATTGTCGTCCTTTTGAAGTTGAACTCGCTAGGTTTGGCATATGACCCCTGCTATGTGTTAATAAACAATAATGTAGGGTTTTAGATTGTTCTTATTTTAAAAATTATTTAGCCTCAATGTTATCGTCCCTTTGAAGTTGAACTTGATAGATCTGGCATTTGATCCCAGCTATGTGTCATTAAATAATAATGTAGAGTTTTAGATGATTTTTTAAGAAAATTGTTTGGCCTCGATGTTGTAGTCCTTTTGAAGTTGAACTTGCTTGGTTTGGCATTTGACCCCATTTACGTGTTAGTAAATGACAATGTAGGTTTTTAGATCGATTTATTTCATTGTTTGGCCTCAATGTTGTGGTTGTTTTGAAGTTGAAGTTACTAGGTTTGGCATTTTGACCCCTGCTACGTGTTTGTGAATGATGATGTAGGGTTTTAGATCATTCTTTTGTTTGTTTTAGGTTTTTGTGACTTTTTTTGTTATTGCTTTGTGTTCCAACAGTTCAAAAGCCTTTGAACTAGTGCAGTGTTGTGAAAAGCGCAGAAAAGAACGCTTAAAGCGCGTTTCAAAGCGAAGCGATACCAGTGCCCTTCTTTCTCCTGAGGCGATGCGATCTGAAAAAGGCGCTCGCTTCAGATAACGTTGCGAGAAGCGACACTAAGGCAAAAGCGCAATAAAGCGCGCTTTTTATAAAAAAGCGACAATTAGTTTTTTTTTTTAAAAAATTAGTTAAAAAAATCTGAAATATACAATATAACTTAATTTTTCTTTCATGACTCTTCTTTCGCTTCTTCTCTCTTCACGACCACGACTGAGACTGCGTCTCTCTTCACACATCGACTGCGACTGCATGTAAGTGTTAGCCGATGTTTATTAGTTCATCTCTATGAGTTTCTTTTCTCCTGAAATATACAATCTTCGCCTTTGTTTCATCTCTGTGAGTTTCTTTTCTCTTCAAGAAATGTACGAAGGAGAAAGTCTCACTTATGGTGATGTTTCTGTGGCAAGTGGTGTTGAGGAGAATATTTATAGTTTTAGGGGGAGTACTTTAAGGGGCAAGGAAAGAGGAGTTGGAGGTTCTAGTTCAACTCGAAACCTTGTTGATGAGCCTTCTGATGATGAAGAAGATGATGACCAAGTAGAACCCTTGGTTATGGCACTTGAAGAGTTTGAGGATCTTGTTGAAGAATAGGAGTTTGAGTCTTCGTGATTTAATTATGTTTTTATTTTTGCTTTATATGTTATGACTTATGAGTATTATTGACTATCTATTTTCTTTTAATCTAAGACTATATTACCTCTATTTAGTTATTTTTTTATTTTTATTTTTATACTAATTTCGCTTTTTTTTAAAAAAGCGTGCGCTTTGCTTCACGCTTCTCGCTTCTGTGAAGCAAGCCCTCGTCGCTTTTTTCCGCTTATCGCTTCCCAAAACACTGAACTAGTGCCACTTGCGTGAATATAATGCTTTTGTGCATGTTTGAGTTGAGAGTAGTCCACTTTCGTGTTATTGTAGTCAGTAGCGTATGCAAGATTTTTCAAAAGTGATGTTGACATTTAAAGAAGAGAACGGATTAGATGAAATAATGAAATTTTTTAACCTTAGGGTCTTAAATCTATATTGACTAATCAAGTTAAAAATTGGTTAAATAAATTTAATGTTTACAATTTATGCAAAAGCGGAGAGCTTGGTTGATGGGTTTTGATTTGATCCTTTAACAATTAAGCGCTTCAAATTAAAAGAATCACAGAATCACACGAATTCACTGAGTAGGAGGTTCAAAGTCGGGGAAAATGCAACATAAGTTATGAGCTTAACCAGGGACCATAGAGCACTGTGTGTTATCATTCAATAATATATGTTCACGTACTCTATTTTTTCAGGTTTTATATATATAAGAAATTTTTGATGAATCAGTGTCAGATGACACCCCTTGCCACAAGGTGCATCCAGCCTGTAGTCTCAAGGGAAAACGGCAGTCATGTTAATTTATTCCCATAGATAGTTAGTGTTCCTGCTCTCCGAGTGTTGTGTAATGGCCATCCATTTATTCAGTTTTACGTATTTGACCTCAAGTGTTTTGTTGTCTAGGGGGAGGGTAGCGTAATGGTCAGACCCTTTACCCTACGGTATTATTGGAGGATTGAATCACCATGGTAGCAAGGTCGGAAGGGGTCACAGTTGGTTGTCTGGGTTGGGTTTCTTTGGTTAGTAAGGGGGTTGGTATGCAAAACAATTGTGTGCTGCCTTTTGCTTTTATCAGTATAACTGTGCGAGGGGCACAGTTACTTGTGTTGCTTTGTCTCTGTTAAGAACATATCTACTACTCTTGAAGTAACATGTTCTCTTCCCTTGTGTAGTTCATCTTCTTCTCTCTTTTGCGCAGCCTTATTTAGCTGTTTTGGCTGTAGTACATTTTTAGTACTCCCTCTGTTTCAAAAGGATGACCTAGTTTGACTTGGAACGGAGTTTAATAAAAGAAAGAAGACTTTTAATCTTGTGATTCTAAATTAAAGTTATGTCAAATGTACCAAAATGCCCTTTGATCTTGTGGTCTTAAACATGCCACGTGGAAATTTAAAGTTAAAGTGTTGCAAAAAAAAGAAATGCGTCATTCTTTTTGAAACAGACTAAAAAGAAAATAGGGTCATTTTCTCGAAACTGAGGGAGTTCCATCTTATAAACACTGTCAATCATTCAGGTGATGGAATATAACACATGAAAAATGTGATTCATGGATTTCTTTATAGTATTATTGCTTTGTTTAACTCTTATTCTCATTTCATGCTTTAAAGTCGTTTCGTCTTTTCTGGTGCCAGAGGTAATTGGATACTGAAGCTTGAGATGGCTGCTACTGCAACTGCATCTTCTACTGGTCCACGTTATGCACCAGAGGATCCCACCCTTCCCAAACCTTGGAAAGGCCTAGTTGATGGTAAGACTGGATATCTCTATTTTTGGAATCCAGAGACCAATACTACCCAATACGAGAAGCCTGTTGCTACTCCTCATGTGGGTGCTGCACAACATAAATCCTCTGTATCTGTAAGTTCATCAGTTGAGAGGCCTTCTCAAAGTCAATGTTCTGACCATGGTGACAACAGAGGTACCAATGGTGCCTTGAGCAAACTTTCCTCTGGAGAGGGTATTCAGGTATCTAGTTCTAATTAATACATGTGATTTCAATTTCTTCTCTCTAACTTTCAGTGACTTAGTGATACACAACAGGAGAAATCAGCAAACTTTTGTTTTGAATAGTATCTTGGGTTGTCTATTGTCATTTTGAAAATCACTATTTGAGATTAACTACATGTTCTCTCTGACAGTTCTAAATGCAAATTAGAACCTGCACTATGTATTACTTGGAAAAGATGGTATATATCAGTTTTCTTGATCTTTTGCAACCTTATGTTGTGCATCATATTTCCTATGTAGTAAATGTTCCAGTGGTTTGATATAACAAATAATTTGCAAATAACATATGTTTTGGCGCGTGTATGTTTTAGAGGAGTTTCATCTGTCTTTTTGTGATTGTAGTTATTGTAACAGCACTTAGAGAGGTGGTGTCTGGATTGGCTTTTTAACTCTCTTACAAGTTAAAAGTCAAAAGGCATAAGTTGGTAACCCCAACTTTTGACTCCTTTTTTTTTTTGTACTTTTTAAGCTTTTAAAAAGTGTTTAAAAGAACTTCTGATGTTATCCCAACACCTCCAAAACAAAAAAAATTTCTTTAAAGCCAAAAACCACTAAATTAAGTCAATCCAAACACCCCAAGTTTGAACCTCAAGTGGGTGTTTGGATTGACCTATTTTTTGTGACTTTTGGCTTTTAAGTTTTTTTTTTTAGTTTGGAAGTGTTAGGGTAAACTTTAAAAGTGCTAGAATTTAAATGTATGGAAAAAGCTAACCCAACTTATAGGTTTTGGCTTATAAGTCATTTTAGAAAACCCATCCAAACACCCCCTTAGACTCTTTCCACAATTATTTCCTGATTAATATCCAAATTATACTTACTCTACCAGTGGATTTCTTTTGGTCTAAGTAGATTTTTTCTTTCACCTTTAAATAGTTTCCTAAATTGTCTTCCGTATTTTTGCTAAAACATGTTTCCCCCCATCATTCTTGTAGACTGCAAGAGCAAATGAGCTTTCCCGCGATGAAACATCTGCGCCTAAAGGTTATAGTGCTTCAGCTGCCGCGAGTGACATATCTCCAGATGCCTATCGCCGTCAGCATGAAATTTCTGTCTCAGTAAGCATCTGTTGTACCTTTTCAATCAAATAGAATCATTTGTTATTGGTCATTTTCGTTCTCGATTAGTGCCATATTATTTGTGTATGATTCTACTAAATATGTCTTTTTCATTTTGTCGAAAATCGATTATGACCATGAGTAGTGCATGACATAAAGTTTATGTGAATAACAAACTTTTTGTGGAGATTCTCTCAGCGAACACTGCTATGTGCAGGGTAATAGAAAGTTAAAGGGCAGTTATTATGTCTTTGGTGACAGTAGTGAGGAATCTTTTTTGTAGTCAGGGTAATCCTTAGTTTGATGAAACACTATTATTTTTTAAAAAGAATTGTAAACAAGTAATGCAACTCAGACTGTTTTTTTTTTGGGTTCATCTAGAAGATGCAGTGTATTTTGGTGTCTTTGGTCTGTGATAATTATTGTGAATACAATTTGACCCGTAAATTTAACTTAAGATGTGCACACAGATCGTAGCACTGAGTGTGTCATCTCCTATGTGAAACTGATGATAACTTCATTACACTACTCATGTTGCTCATGGAAAACATGTGAATTAATTTCTTTGCATCTGCCTAGGATCCATCCTTCCGTGCAGACAAGCCTAAAAAGGCATGTCTGTCATACTCATGTTTTTTTCTTTTGATAATGAATACTCACGTCTATATTATGTTCTATTGTTCCAGGGAGGTGATGTGCCCCCACCTTTCACATCGTTTGAAGCTACTGGGTTTCCTTCAGAGATTTTGAGGGAGGTATTACTGTAGTCCGTTATTTTGTTTTAATCTCTTTTGGAACATCTGTAGCGAAGAGTTTACTTATTCATAAAGGGTCAAGTGTTCTTCTGTTAATTTCAATGGCTGCTGGAGGTCCATTGCAGTACTCATACAATTTTTCCCTCTGTACCTTGACGCAGATGCGATATTTGCTCCAGTGTGGAGCTAAATGTCGTACGCTGTGCAACCCTCTTTTTGGTCTTCCTTGTATTTGGAATTCCCTTATTTGGTGGACCAAATTTTGAAGGGCTTTCTGAATCATCCTTGTTCATGGCTGGGACTGCTGTTGGTGGTGTTAGTCTGCCACATGGTTTGACATGAAGAAGAGGCTTCCTCCTGCTCTTGCTTGCATATGCAAGTGTTGGCTGCCTGCGTAAGGGGGATATGCTTCTTCTTGTGTTAGCCACTTAAAAAAAACGTAGAAATAATCTAGGTGTAACTTCTTAGCTTGTATAATTGCTGACAGAGGTTTTCCAACTTTTACATTTCCAGATACATCAAGCTGGGTTTCCTGCTCCTTCCCCAATACAGGCACAGTCCTGGCCCATTGCACTTCAGGGCCGTGACATAGTAGCTGTTGCAAAGACTGGGTCTGGAAAAACTCTAGGTTTCTTGCTTCCTGGCTTTATTCTTCTAAAGCAACGTCGGAGTAATCCTCAATCAGGCCCTACTATTTTGGTTCTCTCGCCAACAAGAGAATTAGCCACACAGATACAAGATGAAGCTGTGAAGTTTGGTAGATCTTCAAAGATTTCTTGCACGGTATGAATTGTTATTTGACTATGTTTTGTAAAAAGTTTGATTCCAGAAGTAGATTTATCTTTTGATTTCCAATTACTGATGCAGGGCTAACTAATGGTTTAATTGTAAAAACCAAAAGTTAGCTTGGTCTGTCACATTTTTTTGCTATACTCCTTTACCATAATTTTCCTGTTAAGTCTGATTCTAAAGATCTCATCTTTTCGAATAGTTGTCTGGCCAAAAGTGAAACTTAGAGGGTAATCATTGTGTTTCTCATTTTGTGGTATCAAACACATATCTGCTTAATCCTATGCAATCTCTTTAAACGGTTATATGCTTCTTTTTCGTCAAACATAATTTTTGTTAACGTAAATAACCATGCACGAAGATAATGTTGTGCACTATTACGAAAAGGGGAAGGCCCCATTTACATTACTTGACAAAAAAACGAATGATTTTATTAAAACCTTTACAGAAGTATACTATTTTACACCTTCCCGTAGAACAATCAACAAATGTTGACATGCTAATGTTCAGGTCAGATGAACCAAGTGAATGTGTGTTTTAATTTTTTTGAAAATTGGCAATGCTGTATGGTTTTTGGTTAGTGTCTATATAGAGGGGGGACCCAACAGGCCCTCTGCTTTGACAATTTTCTTGAGAATTGACAATGCTGTATGTTTTTTGGTTAGTGTTTATATGGAGGCGCCCCAAAAGGCCCTCAGCTACGAGATCTGGATAGGGGAGTTGATATTGTTGTTGCTACCCCTGGTCGATTGAATGATATTTTGGAGATGAGAAGAGTTAGGCTGGATCAAGTTTCTTACTTGGTGTTAGATGAAGCGGATCGTATGCTGGACATGGGATTCGAACCTCAGATAAGGAAGATTGTGAAGGAGGTGCCTACGCGACGGCAGACACTGATGTACACAGCAACATGGCCTAAGGAGGTCCGTAGAATTGCAGCTGATCTATTGGTTAATCCAGTTCAGGTTAACATTGGGAATGTTGATGAGCTTGTTGCGAACAAGTCTATTACACAGGTGCATTTCTGTTCTGTTCTCTTTTCTTGGACCGTGCTCATTAAAAATGCCTAAGAGTCTCTCTCTCCTCTAAATTGGATTAGAGGACTGAGATGTCATGGTAGAATGTGCGTCCCTTATTATCCCTGAGCACCAAGGGAGAACCTGTACTTGACATAATGAGGTTACATCATGTTTAATTAATTGTCATGTGCAGTACATTGAAGTCTTGTCATATATGGATAAACAAAAGCGTCTAGACCAGATCTTGAGATCCCAAGAGCCTGGATCAAAAATCATTATCTTCTGTTCAACTAAGAAAATGTGTGACCAACTTGCTCGCAATCTTACACACCCATTTGGAGCTGCTGCTATTCATGGTGATAAATCTCAGGGTGAGAGGGATCATGTACTGAGCCAGTTCCGCACTGGCAAGTCCCCCGTTCTTGTTGCAACTGATGTTGCTGCTCGGGGCTTGGATGTCAAAGATATCAGGTTGGTGGAACTAAGAATCTTATAGTGTGCTTGATTATTTGTGGGTCACGTTTAATTCTCTTTTAATGGCTAACTGAATTAAAGAATATATATGCCTTCAACTTTTTATGGAGCGAGCATTTGGACCGACATATATTCCTTGCATGCTCTTCCCATGTTATTTCCCGTTAATCGATGGGGTGCAAACAGGCGTGTGGGGGTGGAGTTGTGTTTCTGATTTTGTTTTGGGTACCATTTGGTGATTTTGGGAGAGTGTAGGCCAAAAGTTACAACTTTGTACCTTTCATGTGTGATGTCATGATTTAGTTTGCAATGTAGATGGATGAGTAAAGTTCACATGGTATCCTTTCAATAAGATCTACTCTCCTAAGCTCCTTTCTTTTTCCATTTAGCTTTTATTGTTTGTTTGGGTTTGTAACTATGTGACCACTGAAAGTGGAAGAGCTATTTGATGAGACTTCATCAGATGATTGTACAAGAAGGAACTAGATAGATTAGAGAGAAAAAAAGAACAGATAAGAAAAAATGATAAATAAATAAAGGAATTTTGGGTTAGGTTAGCATCCGAGTTTGGGGCGGTATGGCATGGTTTGACATCATGCTGGAATTTTGTGGTTTTGACATTTGAAATATGCTCGAGCAGAGGTACCTCCAGAAACATTTTCTCTACCTTCATAAGGTAGAGGTAAGGTCTATGTACACTCTACCCACCCATCCCCTACCAGACCCCATGTGGGATTTCACTGGGTTATGTTATTGTACAATTAAAATATTTATGCATTCTTATAAATACTCTTTAAAGAGTAGTTTCTCCTAATATTTTTGGTAGTGGGATTTCTCTTCTATATAAGTTAAACAATTGATGAAACATTTGTGGCAGGGTGGTGGTCAACTATGATTTTCCAACTGGTATAGAGGACTATGTCCACAGAATAGGAAGAACTGGTCGGGCTGGTGCGACTGGTGAGGCCTACACATTTTTTGTTGACCAGGATGCTAAACATGCTTCAGATCTTATTAAAGTTTTAGAAGGAGCAAATCAGCAAGTGCCTACTGAACTACGTGATATGGCTTCTCGAGGAGGTGGTATGGGGAGGGCTAGGCGTCAATGGGATTCTGGCTCAGGTGGACGGGAAGGAGGACATGGGGGACGTTATGATGCTGGCTACGGTGGACGAGATGGAGCAAGGGGTGGTTGGGAAGCCCCTTCATCAGAAAGAAGTGGACGTGTTTATGACTCGGATTCACGTGACAGGTTAGCTGTGTATCAATTGTATGTGGATATCTTATTTTCCTTTTTTTTTCCATGTTCTGACTAATTGGTTGTGATTTGTTTAGAGATAGACATGGTCATGGCTCTGATGCTCCAGCTAGTTTCCATGGTCGAAGCTTCCATGAAACTATGATGCAGGGTTCACAGAGACGTGATAGAAGTAGGAGCAGAAGCCCTAATAGAGGTTCTGGATGGGGTGACAGAAAAGGCAGGGAGCGAAGTCGTAGCCGTAGTGCTGAAAGATCTGAGCGGACTCGTATTCAAGTTCCAGTAGGTGGCAGTTTCCATGAAGCCATGATGGGCTTCACTAGATCATCAGCTGGTGATTCCCGAAAGGACTGGGAAAAAGAAAGATCCCAAGGTGATGGGAAATCTGGCGATGGACCCCGTGCTAACAATTGGGAGGAGTAAGAAGGTAAAGGAGAGCCTGTGTTGATTTTTGATGTGTTGTAGGAAATGCTGGAAGAAAAAGGGGTCATTTTTGTTAAACTTTAACCACTACATGTTTTGGCAAACAGTGTTCTCGGATAGAAGAAGCTTTTAGCGTATTACTGGAAATAGATAGCTGAAAATCTGCAAATGGGAAGTTTTTGACGGATGTAAATGTAAAGTATTTTACCGTCAAACTTTGTTTAATGGAATCAGCCCACTTCTAAGTGTTG</genome_strand>
        <mrna_strand>GGGTTTCTCTCTGCTTCTCCGCTGCTTCACTCATACCTTCGTATACTTTTATATATAAATTATTTAGCAGAGTGAGTGGGAGGGAGAACGGACGGGAGACATCGTCGGAGGTGGGAATCGTTTGTATCAGCTTCTTTTATCGTCATCGGAAAGACTTTGTCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTAATTGGATACTGAAGCTTGAGATGGCTGCTACTGCAACTGCATCTTCTACTGGTCCACGTTATGCACCAGAGGATCCCACCCTTCCCAAACCTTGGAAAGGCCTAGTTGATGGTAAGACTGGATATCTCTATTTTTGGAATCCAGAGACCAATACTACCCAATACGAGAAGCCTGTTGCTACTCCTCATGTGGGTGCTGCACAACATAAATCCTCTGTATCTGTAAGTTCATCAGTTGAGAGGCCTTCTCAAAGTCAATGTTCTGACCATGGTGACAACAGAGGTACCAATGGTGCCTTGAGCAAACTTTCCTCTGGAGAGGGTATTCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAAGAGCAAATGAGCTTTCCCGCGATGAAACATCTGCGCCTAAAGGTTATAGTGCTTCAGCTGCCGCGAGTGACATATCTCCAGATGCCTATCGCCGTCAGCATGAAATTTCTGTCTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTGATGTGCCCCCACCTTTCACATCGTTTGAAGCTACTGGGTTTCCTTCAGAGATTTTGAGGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACATCAAGCTGGGTTTCCTGCTCCTTCCCCAATACAGGCACAGTCCTGGCCCATTGCACTTCAGGGCCGTGACATAGTAGCTGTTGCAAAGACTGGGTCTGGAAAAACTCTAGGTTTCTTGCTTCCTGGCTTTATTCTTCTAAAGCAACGTCGGAGTAATCCTCAATCAGGCCCTACTATTTTGGTTCTCTCGCCAACAAGAGAATTAGCCACACAGATACAAGATGAAGCTGTGAAGTTTGGTAGATCTTCAAAGATTTCTTGCACG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTATATGGAGGCGCCCCAAAAGGCCCTCAGCTACGAGATCTGGATAGGGGAGTTGATATTGTTGTTGCTACCCCTGGTCGATTGAATGATATTTTGGAGATGAGAAGAGTTAGGCTGGATCAAGTTTCTTACTTGGTGTTAGATGAAGCGGATCGTATGCTGGACATGGGATTCGAACCTCAGATAAGGAAGATTGTGAAGGAGGTGCCTACGCGACGGCAGACACTGATGTACACAGCAACATGGCCTAAGGAGGTCCGTAGAATTGCAGCTGATCTATTGGTTAATCCAGTTCAGGTTAACATTGGGAATGTTGATGAGCTTGTTGCGAACAAGTCTATTACACAG....................................................................................................................................................................................................TACATTGAAGTCTTGTCATATATGGATAAACAAAAGCGTCTAGACCAGATCTTGAGATCCCAAGAGCCTGGATCAAAAATCATTATCTTCTGTTCAACTAAGAAAATGTGTGACCAACTTGCTCGCAATCTTACACACCCATTTGGAGCTGCTGCTATTCATGGTGATAAATCTCAGGGTGAGAGGGATCATGTACTGAGCCAGTTCCGCACTGGCAAGTCCCCCGTTCTTGTTGCAACTGATGTTGCTGCTCGGGGCTTGGATGTCAAAGATATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTCAACTATGATTTTCCAACTGGTATAGAGGACTATGTCCACAGAATAGGAAGAACTGGTCGGGCTGGTGCGACTGGTGAGGCCTACACATTTTTTGTTGACCAGGATGCTAAACATGCTTCAGATCTTATTAAAGTTTTAGAAGGAGCAAATCAGCAAGTGCCTACTGAACTACGTGATATGGCTTCTCGAGGAGGTGGTATGGGGAGGGCTAGGCGTCAATGGGATTCTGGCTCAGGTGGACGGGAAGGAGGACATGGGGGACGTTATGATGCTGGCTACGGTGGACGAGATGGAGCAAGGGGTGGTTGGGAAGCCCCTTCATCAGAAAGAAGTGGACGTGTTTATGACTCGGATTCACGTGACAG...................................................................................AGATAGACATGGTCATGGCTCTGATGCTCCAGCTAGTTTCCATGGTCGAAGCTTCCATGAAACTATGATGCAGGGTTCACAGAGACGTGATAGAAGTAGGAGCAGAAGCCCTAATAGAGGTTCTGGATGGGGTGACAGAAAAGGCAGGGAGCGAAGTCGTAGCCGTAGTGCTGAAAGATCTGAGCGGACTCGTATTCAAGTTCCAGTAGGTGGCAGTTTCCATGAAGCCATGATGGGCTTCACTAGATCATCAGCTGGTGATTCCCGAAAGGACTGGGAAAAAGAAAGATCCCAAGGTGATGGGAAATCTGGCGATGGACCCCGTGCTAACAATTGGGAGGAGTAAGAAGGTAAAGGAGAGCCTGTGTTGATTTTTGATGTGTTGTAGGAAATGCTGGAAGAAAAAGGGGTCATTTTTGTTAAACTTTAACCACTACATGTTTTGGCAAACAGTGTTCTCGGATAGAAGAAGCTTTTAGCGTATTACTGGAAATAGATAGCTGAAAATCTGCAAATGGGAAGTTTTTGACGGATGTAAATGTAAAGTATTTTACCGTCAAACTTTGTTTAATGGAATCAGCCCACTTCTAAGTGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U566605" ref_strand="+" ref_description="SGN-U566605 Tomato 200607#2 [25 ESTs aligned] (*GB) gi|18395855|ref|NP_566142.1| (e_value=8e-119) triose/phosphate translocator, putative [Arabidopsis thaliana]; (*ATH) AT3G01550.1 (e_value=5e-121) | Symbol: None | triose phosphate/phosphate translocator, putative, similar to SWISS-PROT:P52178 triose phosphate/phosphate translocator (Cauliflower){Brassica oleracea} | chr3:216820-219016 REVERSE | Aliases: F4P13.10, F4P13_10; (*SWP) sp|P52178|TPT2_BRAOB (e_value=6e-107) Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT; ">
      <seq>gggttgtttctcctccctgctaaagttgtgcaatattcattttttatctgttgccaacatatagatgtataattgaaatttcaatggaagaatgtcaaccatcaatgtcgatataagctgatacgaaatagatttagctctcaaccataaaccatgggaacctctacattttacatgtctcttcccacaccatttctaaagcctcaaaaaccttccaataaaatcttcattaccagtagtaataagttcaactcagctcttcagcattatgctttgcacaagccaaaaagttgttcgattcgaaaaactagtgttgctattctggcgaaaagttcatgtagactggatctgttcaaagtgagggctgtagcagaaaatgcaggtgaatctgaggttgtgaaacccaaggaagtgatacagacgcttcaactgggcgcgatgtttggaatttggtaccttttgaatatttgttataatatttacaacaaacaggtactcaaggtttttccatttccggcgactgttacggcctcacaatttggctgtgggactttgttaatactctttatgtggggatttcgtcttcatccgataccaaaaatcagtaaatctcaatttaaagcaatattcgcactagctgcaattcacacattgggtaatgttctaacgaacatcagtcttgggagagtagccgtttcgtttactcacacaatcaaagcaatggaaccattcttcaccgtgcttctttccgcgctgtttcttgcagagcggccatctccttggattgtatcttctctggttcccgttgttggtggagtagcattagcatcaatgacagaggcctcttttaattggataggctttggcagtgcaatggcttccaatctgactaaccaatcgcgtaatgtatttagcaaaaaattcatggttaaagaggaggaggcattggacaatatcaatttgttctctatgatcacaatcatttcattcatccttttggtacctgctgccattttgatggaagggatcaagcttactccatcctatctacaatatactgctgcaagtcaaggtttacatgtcagagagctttgtgtgagacttcttttagctggattctgcttgcacagttaccaacaggtttcatacatgatactacagatggtatcaccagtgacacatgcagttggtaattgtctgaagagagtggtagtcattgtatcctcagtcatcttcttccaaacacccgtttcaccaattaactcccttgggactgctatggctctagctggagtctttctttattcaagagtaaagagattacgggggaagccaaaagatgcgtgacaagtgaagaaagttgtcaaatcctgtagtcataatgccctgtaaagaaaaggttaaccaaaaacaggaactcgtggattgggttcgagttataggaagattaggtcaggaactagcaagtagtttgagaatccctgtcaataatggaaggatggcaaaagatggaagaagatatttaaagcaatcgttattgcatttcaagatgtgtaatttatacattagtgcaataccaaaatcaactactaaggcctatgactgaaactgaattattctgatctggctcaaaaagttttggaaattccatgtatcaaaaccaggataccctttaaaagagggaatataatttcaatcctctctcaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0123B22.1" temp_strand="-" temp_description="C02SLe0123B22.1  AC215465.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0123B22 sequenced_by:kribb upload_account_name:korea">
        <position start="161343" stop="138241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="161044" g_stop="160430" g_length="615"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="615" r_length="615" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="160429" i_stop="159760" i_length="670">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="159759" g_stop="159607" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="616" r_stop="768" r_length="153" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="159606" i_stop="159367" i_length="240">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.732" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="159366" g_stop="159281" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="769" r_stop="854" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="159280" i_stop="158991" i_length="290">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="158990" g_stop="158906" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="855" r_stop="939" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="158905" i_stop="158649" i_length="257">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="158648" g_stop="158526" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="940" r_stop="1062" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="158525" i_stop="158434" i_length="92">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="158433" g_stop="158356" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1063" r_stop="1140" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="158355" i_stop="158019" i_length="337">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="158018" g_stop="157889" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="1141" r_stop="1270" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="157888" i_stop="157752" i_length="137">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="157751" g_stop="157384" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="1271" r_stop="1638" r_length="368" r_score="0.986"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="157383" i_stop="156531" i_length="853">
            <donor d_prob="0.674" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.42"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="156530" g_stop="156442" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1639" r_stop="1726" r_length="88" r_score="0.506"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0123B22.1" gen_strand="-" ref_id="SGN-U566605" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>1727</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0123B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U566605" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="161044" e_stop="160430"/>
          <exon e_start="159759" e_stop="159607"/>
          <exon e_start="159366" e_stop="159281"/>
          <exon e_start="158990" e_stop="158906"/>
          <exon e_start="158648" e_stop="158526"/>
          <exon e_start="158433" e_stop="158356"/>
          <exon e_start="158018" e_stop="157889"/>
          <exon e_start="157751" e_stop="157384"/>
          <exon e_start="156530" e_stop="156442"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTTGTTTCTCCTCCCTGCTAAAGTTGTGCAATATTCATTTTTTATCTGTTGCCAACATATAGATGTATAATTGAAATTTCAATGGAAGAATGTCAACCATCAATGTCGATATAAGCTGATACGAAATAGATTTAGCTCTCAACCATAAACCATGGGAACCTCTACATTTTACATGTCTCTTCCCACACCATTTCTAAAGCCTCAAAAACCTTCCAATAAAATCTTCATTACCAGTAGTAATAAGTTCAACTCAGCTCTTCAGCATTATGCTTTGCACAAGCCAAAAAGTTGTTCGATTCGAAAAACTAGTGTTGCTATTCTGGCGAAAAGTTCATGTAGACTGGATCTGTTCAAAGTGAGGGCTGTAGCAGAAAATGCAGGTGAATCTGAGGTTGTGAAACCCAAGGAAGTGATACAGACGCTTCAACTGGGCGCGATGTTTGGAATTTGGTACCTTTTGAATATTTGTTATAATATTTACAACAAACAGGTACTCAAGGTTTTTCCATTTCCGGCGACTGTTACGGCCTCACAATTTGGCTGTGGGACTTTGTTAATACTCTTTATGTGGGGATTTCGTCTTCATCCGATACCAAAAATCAGTAAATCTCAAGTTACTCTTTCTCCTCTCCGCTTCTTCATGTGTTTTATTTTTATTGTTATTTTGAAAATTCAGTATTTTCCTTTCTATCCTGCTTTGATTGCTGTTATTGTGCATACATCTTTGATCCTACTCTCCCCAGACCGATTACACACATGGCTGCTGTTGTTGTATTTTCTGGTATTTTGTTAACAGAGAATTTATTTCGTGAGAAAAACTTTACTCCCTCCGTTTCAATAAAAAAAATAATTTTTTTTGTTACATTTTAATTTCATCTTTTCACCTGAGATGATTAGGCTACGAGATTAAAGAATAATTTTGTATATTAGATATAACTTTAATTTGGGAGCATAGATTTAAATATCTTTATTTATTTTTTTTAAAAAAATCTCGTGTCAAGTTAAACTAAATCATTATTTGCGTACGGGAGCTACTCTTTTTAATACTTTTTAACTTCATGATACTTGCTTCGACGTCTATTGAACTTTACCACGCCAAAATTCATCAAAACACACTCGATATGTCAATATCATTATTAATTTTTTAATATATATATATTTTACACAGAAAATGACATCCAGTCATATCAAAAACACGTAAAACCATCCATTTTTCATATATGAGAATTTTGTTTTCAGTATGACTAACTTTCTTTGTTTTGATTTATATATTGAATTTCCAGTTTAAAGCAATATTCGCACTAGCTGCAATTCACACATTGGGTAATGTTCTAACGAACATCAGTCTTGGGAGAGTAGCCGTTTCGTTTACTCACACAATCAAAGCAATGGAACCATTCTTCACCGTGCTTCTTTCCGCGCTGTTTCTTGCAGAGGTATAAAATTTTTACAATGTTACCTCTTCATGATATATAACATTCAGTTGATTTGGCTTGAAAGCACTTTACTTGTTTACTAAACGCGTGATATAAGCTATAACCGCGTAGCATAACTTTATGGAGAACAGCCTCATGTATCTTTGATTCTGACGATCTGATTCTTATCCCTTTGAGTATTACACTAGAAATTCAGCTTATTTAGCATATATAATGATGAGCTTGTTGTGATCCACGTAGCGGCCATCTCCTTGGATTGTATCTTCTCTGGTTCCCGTTGTTGGTGGAGTAGCATTAGCATCAATGACAGAGGCCTCTTTTAATTGGTATGTCCCTCCCTAACTTTGTAAATTTTATCGTTTTGTTTCTGTAGGTTAGACCGGTCTATATATTGCTCTCTCCTTGTGCCTATTTTGCTGTAGGGGGCGGTTTACAGGTGTACAACCTCTGTAACTTCATGGTATATTTATGGATTGACAAGTTCTTATTAGAAGACTGCAATTTCCTAACTGTCGCACTATCTACTCCTGTTAATAGTTTTGCACAGTTATTGTTGTTACTGTGGGGTCTTAATAGCAGTTATACATTGATTCTGAACTCTCTGTCTTTGGAACAGGATAGGCTTTGGCAGTGCAATGGCTTCCAATCTGACTAACCAATCGCGTAATGTATTTAGCAAAAAATTCATGGTTAAAGAGGAGGTATAGACACTAAACATTCAGATGCTAGGAAAATAAATACTCAATTATTCTAACATCATAGGTATTCAAATTCAGCTATCTTACTTCTTATATTAAAAAAACAGTCGTAGCCTTGGGGTGTGGCCCTTCTCCAGACCCTGGTGAAAGCAAGATGATTTATGCACCGGGCTACCTTTTTTAGTTTTTAATTTATCATATTTGGTGAAGATGCAAATTTTGTCTTGTGAAACCATTAACTGTCAAAGATGGTCTAATAGGAGGCATTGGACAATATCAATTTGTTCTCTATGATCACAATCATTTCATTCATCCTTTTGGTACCTGCTGCCATTTTGATGGAAGGGATCAAGCTTACTCCATCCTATCTACAATATACTGCTGTAAGTAGTATATATTAACTTCCAGCCATGTTTGAAGTGATTTTTATCTTCTACTTTTACTACAATGTGATTTGTTTTCCGTATCAATCTAGGCAAGTCAAGGTTTACATGTCAGAGAGCTTTGTGTGAGACTTCTTTTAGCTGGATTCTGCTTGCACAGTTACCAACAGGTTAGTATCCTGTAAATTTACATGATAATCTGCTCTGTTAACTTTGGTTCTGTTTGCTTTAGAGCCTCCTGAAAAGTGAAAACTATATCACTAAGCATCATTATTCTGACTAGAAGCCGATGCCAGCCTTTTTGCAATATGTTCAACTGAACTGAGTATTTCCAACTCGGAGCACAGCTATATGTGTGAAAAAACATGATAATTTCTAAAAATTAAAAACTGTACCCCGTAATTGTAAAATGAATATAGTGCCAATAACCTTAAAAGTTGAACCCGTCAAATTTAAATACGTTAAATCCACGTTTCATTCTTACTTGATCTTTTTCTTTGTGGAAAGGTTTCATACATGATACTACAGATGGTATCACCAGTGACACATGCAGTTGGTAATTGTCTGAAGAGAGTGGTAGTCATTGTATCCTCAGTCATCTTCTTCCAAACACCCGTTTCACCAATTAACTCCCTTGGTAAATATTGATTCTCTACTTACTACTTTTTTTTTTTTGGAATCAAGTATATCAGTTTCTTAACATCTCTATTGATTGGTTGAGTGAATCTATCTATCAGTAATTATCTAGCTTGTGACACTGTTCAATATATTCAGGGACTGCTATGGCTCTAGCTGGAGTCTTTCTTTATTCAAGAGTAAAGAGATTACGGGGGAAGCCAAAAGATGCGTGACAAGTGAAGAAAGTTGTCAAATCCTGTAGTCATAATGCCCTGTAAAGAAAAGGTTAACCAAAAACAGGAACTCGTGGATTGGGTTCGAGTTATAGGAAGATTAGGTCAGGAACTAGCAAGTAGTTTGAGAATCCCTGTCAATAATGGAAGGATGGCAAAAGATGGAAGAAGATATTTAAAGCAATCGTTATTGCATTTCAAGATGTGTAATTTATACATTAGTGCAATACCAAAATCAACTACTAAGGCCTATGACTGAAACTGAATTATTCTGATCTGGCGGAAAATCATGTATTAAAACAGGAAACCCTTTCATATAGGAATATAATTTCAATCCTCTCTTCTTCTTTTTTATCGTTTGATCATTGTCGATCAGTCCTTTGTTCATACAATAATACCAAGGTCTTAATATGAAAACCATTAATCTACTATTTATTTGCGTTCTTCATGAATACTTTGACTTGAGTTATCCCTTCCATACTAATAGTGAATAGTTTTATAGAAAACCTGTATACCTCCGGGGGAGGAGTAAATTCTGCTTTCCCTACATGGAAGGAGTAAAAGTAATGCATTAACTAGAGAAATTTGCTCAACACTTAGAAGTGGGCTGATTCCATTAAACAAAGTTTGACGGTAAAATACTTTACATTTACATCCGTCAAAAACTTCCCATTTGCAGATTTTCAGCTATCTATTTCCAGTAATACGCTAAAAGCTTCTTCTATCCGAGAACACTGTTTGCCAAAACATGTAGTGGTTAAAGTTTAACAAAAATGACCCCTTTTTCTTCCAGCATTTCCTACAACACATCAAAAATCAACACAGGCTCTCCTTTACCTTCTTACTCCTCCCAATTGTTAGCACGGGGTCCATCGCCAGATTTCCCATCACCTTGGGATCTTTCTTTTTCCCAGTCCTTTCGGGAATCACCAGCTGATGATCTAGTGAAGCCCATCATGGCTTCATGGAAACTGCCACCTACTGGAACTTGAATACGAGTCCGCTCAGATCTTTCAGCACTACGGCTACGACTTCGCTCCCTGCCTTTTCTGTCACCCCATCCAGAACCTCTATTAGGGCTTCTGCTCCTACTTCTATCACGTCTCTGTGAACCCTGCATCATAGTTTCATGGAAGCTTCGACCATGGAAACTAGCTGGAGCATCAGAGCCATGACCATGTCTATCTCTAAACAAATCACAACCAATTAGTCAGAACATGGAAAAAAAAAGGA</genome_strand>
        <mrna_strand>GGGTTGTTTCTCCTCCCTGCTAAAGTTGTGCAATATTCATTTTTTATCTGTTGCCAACATATAGATGTATAATTGAAATTTCAATGGAAGAATGTCAACCATCAATGTCGATATAAGCTGATACGAAATAGATTTAGCTCTCAACCATAAACCATGGGAACCTCTACATTTTACATGTCTCTTCCCACACCATTTCTAAAGCCTCAAAAACCTTCCAATAAAATCTTCATTACCAGTAGTAATAAGTTCAACTCAGCTCTTCAGCATTATGCTTTGCACAAGCCAAAAAGTTGTTCGATTCGAAAAACTAGTGTTGCTATTCTGGCGAAAAGTTCATGTAGACTGGATCTGTTCAAAGTGAGGGCTGTAGCAGAAAATGCAGGTGAATCTGAGGTTGTGAAACCCAAGGAAGTGATACAGACGCTTCAACTGGGCGCGATGTTTGGAATTTGGTACCTTTTGAATATTTGTTATAATATTTACAACAAACAGGTACTCAAGGTTTTTCCATTTCCGGCGACTGTTACGGCCTCACAATTTGGCTGTGGGACTTTGTTAATACTCTTTATGTGGGGATTTCGTCTTCATCCGATACCAAAAATCAGTAAATCTCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAAGCAATATTCGCACTAGCTGCAATTCACACATTGGGTAATGTTCTAACGAACATCAGTCTTGGGAGAGTAGCCGTTTCGTTTACTCACACAATCAAAGCAATGGAACCATTCTTCACCGTGCTTCTTTCCGCGCTGTTTCTTGCAGAG................................................................................................................................................................................................................................................CGGCCATCTCCTTGGATTGTATCTTCTCTGGTTCCCGTTGTTGGTGGAGTAGCATTAGCATCAATGACAGAGGCCTCTTTTAATTG..................................................................................................................................................................................................................................................................................................GATAGGCTTTGGCAGTGCAATGGCTTCCAATCTGACTAACCAATCGCGTAATGTATTTAGCAAAAAATTCATGGTTAAAGAGGAG.................................................................................................................................................................................................................................................................GAGGCATTGGACAATATCAATTTGTTCTCTATGATCACAATCATTTCATTCATCCTTTTGGTACCTGCTGCCATTTTGATGGAAGGGATCAAGCTTACTCCATCCTATCTACAATATACTGCT............................................................................................GCAAGTCAAGGTTTACATGTCAGAGAGCTTTGTGTGAGACTTCTTTTAGCTGGATTCTGCTTGCACAGTTACCAACAG.................................................................................................................................................................................................................................................................................................................................................GTTTCATACATGATACTACAGATGGTATCACCAGTGACACATGCAGTTGGTAATTGTCTGAAGAGAGTGGTAGTCATTGTATCCTCAGTCATCTTCTTCCAAACACCCGTTTCACCAATTAACTCCCTTG.........................................................................................................................................GGACTGCTATGGCTCTAGCTGGAGTCTTTCTTTATTCAAGAGTAAAGAGATTACGGGGGAAGCCAAAAGATGCGTGACAAGTGAAGAAAGTTGTCAAATCCTGTAGTCATAATGCCCTGTAAAGAAAAGGTTAACCAAAAACAGGAACTCGTGGATTGGGTTCGAGTTATAGGAAGATTAGGTCAGGAACTAGCAAGTAGTTTGAGAATCCCTGTCAATAATGGAAGGATGGCAAAAGATGGAAGAAGATATTTAAAGCAATCGTTATTGCATTTCAAGATGTGTAATTTATACATTAGTGCAATACCAAAATCAACTACTAAGGCCTATGACTGAAACTGAATTATTCTGATCTGGCTCAAAAAGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAAATTCCATGTATCAAAACCAGGATACCCTTTAAAAGAGGGAATATAATTTCAATC-CTCTCTCAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U587086" ref_strand="+" ref_description="SGN-U587086 Tomato 200607#2 [1 ESTs aligned] ">
      <seq>actttacttgtttactaaacgcgtgatataagctataaccgcgtagcataactttatggagaacagcctcatgtatctttgattctgacgatctgattcttatccctttgagtattacactagaaattcagcttatttagcatatataatgatgagcttgttgtgatccacgtagcggccatctccttggattgtatcttctctggttcccgttgttggtggagtagcattagcatcaatgacagaggcctcttttaattggtatgtccctccctaactttgtaaattttatcgttttgtttctgtaggttagaccggtctatatattgctctctccttgtgcctattttgctgtagggggcggtttacaggtgtacaacctctgtaacttcatggtatatttatggattgacaagttcttattagaagactgcaatttcctaactgtcgcactatctactcctgttaatagttttgcacagttattgttgttactgtggggtcttaatagcagttatacattgattctgaactctctgtctttggaacaggataggctttggcagtgcaatggcttccaatctgactaaccaatcgcgtantgtatttagcaaaaaattcatggttaaagaggaggtatagacactaaacattcanatgctaggaaaataaatactcaattattctaacatcatanntattcaaattcagctatcttacttcttatattaaaaaaacagtcgtagccntngggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0123B22.1" temp_strand="-" temp_description="C02SLe0123B22.1  AC215465.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0123B22 sequenced_by:kribb upload_account_name:korea">
        <position start="159841" stop="158486"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="159541" g_stop="158786" g_length="756"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="756" r_length="756" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0123B22.1" gen_strand="-" ref_id="SGN-U587086" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>756</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0123B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U587086" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="159541" e_stop="158786"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTTACTTGTTTACTAAACGCGTGATATAAGCTATAACCGCGTAGCATAACTTTATGGAGAACAGCCTCATGTATCTTTGATTCTGACGATCTGATTCTTATCCCTTTGAGTATTACACTAGAAATTCAGCTTATTTAGCATATATAATGATGAGCTTGTTGTGATCCACGTAGCGGCCATCTCCTTGGATTGTATCTTCTCTGGTTCCCGTTGTTGGTGGAGTAGCATTAGCATCAATGACAGAGGCCTCTTTTAATTGGTATGTCCCTCCCTAACTTTGTAAATTTTATCGTTTTGTTTCTGTAGGTTAGACCGGTCTATATATTGCTCTCTCCTTGTGCCTATTTTGCTGTAGGGGGCGGTTTACAGGTGTACAACCTCTGTAACTTCATGGTATATTTATGGATTGACAAGTTCTTATTAGAAGACTGCAATTTCCTAACTGTCGCACTATCTACTCCTGTTAATAGTTTTGCACAGTTATTGTTGTTACTGTGGGGTCTTAATAGCAGTTATACATTGATTCTGAACTCTCTGTCTTTGGAACAGGATAGGCTTTGGCAGTGCAATGGCTTCCAATCTGACTAACCAATCGCGTAATGTATTTAGCAAAAAATTCATGGTTAAAGAGGAGGTATAGACACTAAACATTCAGATGCTAGGAAAATAAATACTCAATTATTCTAACATCATAGGTATTCAAATTCAGCTATCTTACTTCTTATATTAAAAAAACAGTCGTAGCCTTGGGGTG</genome_strand>
        <mrna_strand>ACTTTACTTGTTTACTAAACGCGTGATATAAGCTATAACCGCGTAGCATAACTTTATGGAGAACAGCCTCATGTATCTTTGATTCTGACGATCTGATTCTTATCCCTTTGAGTATTACACTAGAAATTCAGCTTATTTAGCATATATAATGATGAGCTTGTTGTGATCCACGTAGCGGCCATCTCCTTGGATTGTATCTTCTCTGGTTCCCGTTGTTGGTGGAGTAGCATTAGCATCAATGACAGAGGCCTCTTTTAATTGGTATGTCCCTCCCTAACTTTGTAAATTTTATCGTTTTGTTTCTGTAGGTTAGACCGGTCTATATATTGCTCTCTCCTTGTGCCTATTTTGCTGTAGGGGGCGGTTTACAGGTGTACAACCTCTGTAACTTCATGGTATATTTATGGATTGACAAGTTCTTATTAGAAGACTGCAATTTCCTAACTGTCGCACTATCTACTCCTGTTAATAGTTTTGCACAGTTATTGTTGTTACTGTGGGGTCTTAATAGCAGTTATACATTGATTCTGAACTCTCTGTCTTTGGAACAGGATAGGCTTTGGCAGTGCAATGGCTTCCAATCTGACTAACCAATCGCGTANTGTATTTAGCAAAAAATTCATGGTTAAAGAGGAGGTATAGACACTAAACATTCANATGCTAGGAAAATAAATACTCAATTATTCTAACATCATANNTATTCAAATTCAGCTATCTTACTTCTTATATTAAAAAAACAGTCGTAGCCNTNGGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U570897" ref_strand="+" ref_description="SGN-U570897 Tomato 200607#2 [9 ESTs aligned] (*GB) gi|157345443|emb|CAO14741.1| (e_value=4e-128) unnamed; (*ATH) AT5G14600.1 (e_value=8e-121) | Symbol: None | expressed protein | chr5:4706948-4709146 FORWARD | Aliases: T15N1.90, T15N1_90; (*SWP) sp|Q96FX7|TRM61_HUMAN (e_value=2e-56) tRNA (adenine-N(1)-)-methyltransferase catalytic subunit TRM61 OS=Homo sapiens GN=TRM61; ">
      <seq>ggacaacaatacattacgtataccccagaccccgcctcgtcttcttcctcgaactcaccagtgcgaaacccagcaagcccagaccccgctctactcgctcttcgtacagtattccggccttcatcgtcggtagcatcggcatctataattaagattcaaccattctacatgattcttccaattgacccagcaaataaattatcgtttaagcgttttattaaagatggagatttggtcattgtgtacgagaggcacgacacaatgaaagcagtgaaagtcagtgaggatggggttctgcagaatcgttttggtgcttttaagcattctgaatggataggtaaaccttttgggtccaaggttttgagtaacaaaggtgcttttgtttacttgttagctccaactcctgagctatggacgctagtactgagtcacagaacccagattctttatatagctgatattagttttgttgttatgtacctggagatcgttcctggttgtgtggttcttgaatctggtactggaagtggatctttgacgacttcgcttgcaagggctgttgcccccactggccatgtttataccttcgatttccatgaacagagagctgcctcagctagggaggactttgaaaaaacagggttgagcagtctggtcacagtaggagtaagagatatacagggcgagggattccctgatgagttttgtgggagagcagattcagtattcttagaccttcctcaaccttggcttgtcattccttctgctggcaaaatgttgaaaccagatggggtattgtgctccttctctccatgcattgagcaagtacagcgctcatgtgaagcactcaaatcacagtttacagatataagaacatttgaagtacttcttcgcacctatgaagttagacaaaagatactagagagctgcccagtaaatgaaggagattctattgagcgtcctccacggaagaggaggcagggttctgctgaaggaagcaatgggactgaatgctcctcttctcctgcggtggtgattaggccttctggtgaggcaagaggtcatacaggctatttgacatttgccagactcaaatgttttgtgtaatgtgttttgatgaatatccagttcttgtggtcgagtacactgttcgttctttagatgttgtgcttatttttcttcttgattctacaattagatatcagacaattttgtcttgagatttaacaaaaaggaaaagaatcgcttctattcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0123B22.1" temp_strand="-" temp_description="C02SLe0123B22.1  AC215465.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0123B22 sequenced_by:kribb upload_account_name:korea">
        <position start="168930" stop="164457"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="168630" g_stop="168487" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="168486" i_stop="166839" i_length="1648">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="166838" g_stop="166363" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="620" r_length="476" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="166362" i_stop="165487" i_length="876">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="165486" g_stop="165242" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="621" r_stop="865" r_length="245" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="165241" i_stop="165147" i_length="95">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.473" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="165146" g_stop="164757" g_length="390"/>
          <reference_exon_boundary r_type="cDNA" r_start="866" r_stop="1255" r_length="390" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0123B22.1" gen_strand="-" ref_id="SGN-U570897" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1255</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0123B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U570897" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="168630" e_stop="168487"/>
          <exon e_start="166838" e_stop="166363"/>
          <exon e_start="165486" e_stop="165242"/>
          <exon e_start="165146" e_stop="164757"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACAACAATACATTACGTATACCCCAGACCCCGCCTCGTCTTCTTCCTCGAACTCACCAGTGCGAAACCCAGCAAGCCCAGACCCCGCTCTACTCGCTCTTCGTACAGTATTCCGGCCTTCATCGTCGGTAGCATCGGCATCTGTAAGTATACTTCGCACAACTCTATGTAAATTCTTCGTCTCCGACTTGAGTGTTTCACTGTGCTCAGAAAAAAAAAACATGCTTGGTTTGTAGTTACTGTGGATTGTCATAGTATACCAAAAACTTAAAATTACCGTTCGATTTTAAAAGGAAACCAAACAGAGCACAAAAAGAACATCAAGAAAACATCTAGCCATTTTTCCATCTTCATATTTCCCAGGGGCTGAAAGCTGTTTTCATTGAAACTGAGAGCATAGAAGAATCTCGTACATCCTCTGTTTGATTTTGGGTCTTTGAAGTCGTTTATAAGAACACACATTCAGAGGGGTATGTAGAAAACTTGAAAAAAGTGAGTGAACAACTTTATACTCATTTATAATTCTGTTAAGTTATTGAAATCATGAGATAAGAACACTATGTTTGACAAATTGTAAACAATTCATAAGAAAGGACTTATGTTGAAATCAGCAGATGATACTAGCCTTGCTATATATTACATTGCACATATTCAATGAATTATATATGATGGCTGGATAGGACTATTTTCTCTGAGTGGCTAAATGACTGAGGTTAAACGGGTTGACTTATTTAAGGTCCAGTGTTTCGTTATGATGATATGGTATTTTTGGAGTTCTTTCTGATTGTCAGTACACGTGAACCCAGCTTTTCCTCTGGTTTTCTGGTGGTTTTTACAGGGGTCTGTCATAGAATGTGTTGAGAATTTGATCTAAAACTTATTGTTTGCATTATCTAGACGATGTGGACTTTATCAAATTGTACTTTTTAATGCTAAAAAGATGATCACTATTTCAAGTAATTAGCGTAGCGGTCAACAAACTGATAAAGTGGGTAAACTTTTTAGAGATTAGTGTCCAAATCTCAACATAATGATAAAATGATTAGGTAACGTTATTTGGTACTTGTATTGGTGGAAGGGAACAACCGTTATAGCTGATTTGAATGCTACCATTATAAGAAAGGCGAGATGAGACAAGTGCATTGAGGTGAGCTATGCTGAGGTATGGAGCGTCCCTTATGGCACGAGCTTGGGGGTAAGAGAGCAAAAATAATCATATTAATTAGGAGTTGAAGTGTGTCCTAAACTAGAAGCTTAATCAACCTGATGAAAGGATTAAAATGTGAGCAGTACTTAACTGTATTTAGATTGGCATCCCCAACTAGATAGGCAATTATTTGTAATCATTTTATTAATTTGAACTATTCAGAGTAGTAGAAGAGAGCACATTATCTCAATCCAGAGAAAGGATAAAAGGCCAAAACAATTTGTTTCCCTCCTTCAAAACTTGGGCAAATGACTTTTTTTTTTTACTTGATTTGAGTTTCATAGTACTCAAGGTTTGACACATTCTTTTAGGAAAAGGCGTGGGATAGTACATAGTTTCTAGAAGAAATAGTGCTCCTAATGCTAATGGGATGTAATATATAGCAAGCCTGTTATTCTTTAACTACAAGAAGCATTGCACATTTGGACTAAAGCTACAGGGTTGACCGAACCTGTAAGCTCTAGGCTTGACGAATTGTTAAGGTTACCGTTCTGTTTTTCAAGTTGCATATTTTATTGGGTTTCTGCTGTTTTCTTTTCAGCACTTTTGAAGCTCTCGAGTAATTATTGGGTTATGTTTGGCAGATAATTAAGATTCAACCATTCTACATGATTCTTCCAATTGACCCAGCAAATAAATTATCGTTTAAGCGTTTTATTAAAGATGGAGATTTGGTCATTGTGTACGAGAGGCACGACACAATGAAAGCAGTGAAAGTCAGTGAGGATGGGGTTCTGCAGAATCGTTTTGGTGCTTTTAAGCATTCTGAATGGATAGGTAAACCTTTTGGGTCCAAGGTTTTGAGTAACAAAGGTGCTTTTGTTTACTTGTTAGCTCCAACTCCTGAGCTATGGACGCTAGTACTGAGTCACAGAACCCAGATTCTTTATATAGCTGATATTAGTTTTGTTGTTATGTACCTGGAGATCGTTCCTGGTTGTGTGGTTCTTGAATCTGGTACTGGAAGTGGATCTTTGACGACTTCGCTTGCAAGGGCTGTTGCCCCCACTGGCCATGTTTATACCTTCGATTTCCATGAACAGAGAGCTGCCTCAGCTAGGTAAGACTCTAATACCTAGGAACTTATTTGTGGATTTACTGTCATTAAGTTGTCAATTGTTCTAGTTTGATTTCTACCAAGCTTTTGTTGGTTTTAAGTGCATTTACTATCCTTTACAGTCATTTTAGTGCAAAAATTTAGTTTTAGAAGATGTTTAAAACTCAGGTTGAACACATTTTTAGTTGTAGGGCACTCCTCAAGAGGTTATAAAATTGAATACTTCTTTTAAATGGGGCTCTTTTTACCGACGAAGAACATTTTCATGGGATTTCTTCTTGTAGCAAAATGTCTTTTTCTTCTTTTTGCTGCTTGATTAAGAAGTTCATCCATCCGTTTAAAAAGCAATGACATCCTTTCCTTTGTAGTTTGTTTAAAAAAGAATGACCTCTTTTCTTTTTTTGGTAACATTTTACTTTCAGCTTTTGATGACATGTTTAAGACCACGAGATTAAAGGGCAATTTTGTACATTTGACATAACTTTAATTTAGGATCACATGATTAAAAAATCTTCTTTATTTTCTAAAACTCCGTACCAAGTCAAACTAGACCAGTCTTTTTGAAACGGAGGGAGTATAAGGTTTCAGGAGTTGGCTCTAGAGTGCCACAGGAAAGCAACATCTTCCCATGCAGCCTTTATGATGTGAAAGTGTAATACTACCACCATGTATCATTGTGCACTAGCACAAAAATGTTGCAAGAGGAGAAAATTTGATCAACACTTGCCTCTTCGTGTAAATGTAACAACAATTAGGAAAAGCGTTCTTTTTCCAATCAGCTCCACACACCCATCTAAAAGACGTAGAATGAGAAAGAGAGCTCATTATAATTTTCATTTTATGTGAGTTTAACTCGGTGTTTAAAATTTCCGCATATAGGGAGGACTTTGAAAAAACAGGGTTGAGCAGTCTGGTCACAGTAGGAGTAAGAGATATACAGGGCGAGGGATTCCCTGATGAGTTTTGTGGGAGAGCAGATTCAGTATTCTTAGACCTTCCTCAACCTTGGCTTGTCATTCCTTCTGCTGGCAAAATGTTGAAACCAGATGGGGTATTGTGCTCCTTCTCTCCATGCATTGAGCAAGTACAGCGCTCATGTGAAGCACTCAAATCACAGTTTACAGGTAAGTTATTTTCCTGGAATCTTGGTCTCATTCAGTTTAAAACACTGCTATAGGAACTACAGACTCTCATGTGGCAAGTGTTTTTGATTTCGTAGATATAAGAACATTTGAAGTACTTCTTCGCACCTATGAAGTTAGACAAAAGATACTAGAGAGCTGCCCAGTAAATGAAGGAGATTCTATTGAGCGTCCTCCACGGAAGAGGAGGCAGGGTTCTGCTGAAGGAAGCAATGGGACTGAATGCTCCTCTTCTCCTGCGGTGGTGATTAGGCCTTCTGGTGAGGCAAGAGGTCATACAGGCTATTTGACATTTGCCAGACTCAAATGTTTTGTGTAATGTGTTTTGATGAATATCCAGTTCTTGTGGTCGAGTACACTGTTCGTTCTTTAGATGTTGTGCTTATTTTTCTTCTTGATTCTACAATTAGATATCAGACAATTTTGTCTTGAGATTTAACAAAAAGGAAAAGAATCGCTTCTATTCG</genome_strand>
        <mrna_strand>GGACAACAATACATTACGTATACCCCAGACCCCGCCTCGTCTTCTTCCTCGAACTCACCAGTGCGAAACCCAGCAAGCCCAGACCCCGCTCTACTCGCTCTTCGTACAGTATTCCGGCCTTCATCGTCGGTAGCATCGGCATCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTAAGATTCAACCATTCTACATGATTCTTCCAATTGACCCAGCAAATAAATTATCGTTTAAGCGTTTTATTAAAGATGGAGATTTGGTCATTGTGTACGAGAGGCACGACACAATGAAAGCAGTGAAAGTCAGTGAGGATGGGGTTCTGCAGAATCGTTTTGGTGCTTTTAAGCATTCTGAATGGATAGGTAAACCTTTTGGGTCCAAGGTTTTGAGTAACAAAGGTGCTTTTGTTTACTTGTTAGCTCCAACTCCTGAGCTATGGACGCTAGTACTGAGTCACAGAACCCAGATTCTTTATATAGCTGATATTAGTTTTGTTGTTATGTACCTGGAGATCGTTCCTGGTTGTGTGGTTCTTGAATCTGGTACTGGAAGTGGATCTTTGACGACTTCGCTTGCAAGGGCTGTTGCCCCCACTGGCCATGTTTATACCTTCGATTTCCATGAACAGAGAGCTGCCTCAGCTAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGACTTTGAAAAAACAGGGTTGAGCAGTCTGGTCACAGTAGGAGTAAGAGATATACAGGGCGAGGGATTCCCTGATGAGTTTTGTGGGAGAGCAGATTCAGTATTCTTAGACCTTCCTCAACCTTGGCTTGTCATTCCTTCTGCTGGCAAAATGTTGAAACCAGATGGGGTATTGTGCTCCTTCTCTCCATGCATTGAGCAAGTACAGCGCTCATGTGAAGCACTCAAATCACAGTTTACAG...............................................................................................ATATAAGAACATTTGAAGTACTTCTTCGCACCTATGAAGTTAGACAAAAGATACTAGAGAGCTGCCCAGTAAATGAAGGAGATTCTATTGAGCGTCCTCCACGGAAGAGGAGGCAGGGTTCTGCTGAAGGAAGCAATGGGACTGAATGCTCCTCTTCTCCTGCGGTGGTGATTAGGCCTTCTGGTGAGGCAAGAGGTCATACAGGCTATTTGACATTTGCCAGACTCAAATGTTTTGTGTAATGTGTTTTGATGAATATCCAGTTCTTGTGGTCGAGTACACTGTTCGTTCTTTAGATGTTGTGCTTATTTTTCTTCTTGATTCTACAATTAGATATCAGACAATTTTGTCTTGAGATTTAACAAAAAGGAAAAGAATCGCTTCTATTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U584636" ref_strand="+" ref_description="SGN-U584636 Tomato 200607#2 [8 ESTs aligned] (*GB) gi|5738864|emb|CAA63220.1| (e_value=0) isocitrate dehydrogenase (NAD+) [Solanum tuberosum]; (*ATH) AT5G14590.1 (e_value=0)  Symbol: None | isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative, strong similarity to isocitrate dehydrogenase (NADP+) (Nicotiana tabacum) GI:3021512; contains Pfam domain PF00180: dehydrogenase, isocitrate/isopropylmala... ; (*SWP) sp|Q40345|IDHP_MEDSA (e_value=0) Isocitrate dehydrogenase [NADP], chloroplastic (Fragment) OS=Medicago sativa; ">
      <seq>cggacaacacaaccgagttttctcacagcggcattgacaacttcttaaagccaactaaagtgttatgctcgccgtccgacccagactccggtgttcctccatggccggcgtcgcttcttttgtctcatcttcatcggcttcagcatcatctatagctagtaaaaaattctattttcaagtcaattccaatcggcagctcttcaataacagagtatctctcactacgcgaatccctaatgcctccattcggtgcttcgcttccacctctggtccgactagcaaaatcctcgttcaaaatcccatagtcgaaatggacggtgatgaaatgacgagggttatatggaaaatgatcaaagacaagctaatctatccttatctagagttggatacaaagtattatgatttaggtatattgaaccgtgatgccactgatgaccaagttactgttgaaagtgctgaggcaaccctgaaatacaatgttgctgtgaaatgcgctactataacacctgatgagaccagagtcaaggaatttgggctgaagtctatgtggaaaagtcccaatggcacaatcagaaacattttaaacggtactgttttccgggagcctatactatgcacgaacattcccaggattgttcctggttggaagaaacccatttgtattggtaggcatgcttttggtgatcagtatcgtgccacagatgcaattattaatgggcccggaaagctcaaaatggtttttgtgccggaaaatggggaatcccctacggagctggatgtttatgattttaaaggtccgggtattgcacttgccatgtacaatgtcgaccagtcaattcgagcatttgctgaatcatcaatgtcaatggcattttcaaagaaatggcctctttacttgagtacaaaaaacacaattttaaagaaatacgatggaaggtttaaggacatttttcaagaggtatacgaagagaagtggaagcaacagtttgaggaacactcaatatggtatgagcatagactgatagatgacatggtcgcttatgtgttaaaaagcgagggtggatatgtttgggcatgcaagaactatgatggagatgtccagagtgatctgctcgctcaaggatttggttctctgggcctcatgacttctgtattgttatcttctgatggcaagacattagaagctgaagcagctcacggcactgtaacaagacattttcggctgcatcaaaagggtcaagaaactagtacaaacagtgttgcttccatttttgcatggacaaagggacttggacataaggctcagcttgatgggaatcaaaagttgttggaatttgttcacacccttgaagcttcttgcattgggacaatagagtccgggaagatgactaaggacttagctatattagctcacggacccaaggtgtcaagagaattctacttgaacactgaagaatttattgatgctgtagcacagaaacttcaagagaagcttcatgcctcggcgcctatttaagttgtactggattatgtagtgagaacatacatgtatgagctgaagaagatcatgagcagcatcctttcactgttaacataactctactcacactgcccgttgagacattctttactctagtttttgtagttgttcaggtacaagataacaggttgttgagtggtcccttcatactgatctacaatgggttgtgtatattattgtctcgttttatttaggatccttcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0123B22.1" temp_strand="-" temp_description="C02SLe0123B22.1  AC215465.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0123B22 sequenced_by:kribb upload_account_name:korea">
        <position start="195325" stop="189387"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="195025" g_stop="194708" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="317" r_length="317" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="194707" i_stop="194631" i_length="77">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="194630" g_stop="194587" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="361" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="194586" i_stop="194482" i_length="105">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.768" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="194481" g_stop="194372" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="362" r_stop="471" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="194371" i_stop="194071" i_length="301">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="194070" g_stop="194033" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="509" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="194032" i_stop="193559" i_length="474">
            <donor d_prob="0.108" d_score="0.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="193558" g_stop="193481" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="510" r_stop="587" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="193480" i_stop="192952" i_length="529">
            <donor d_prob="0.717" d_score="1.00"/>
            <acceptor a_prob="0.922" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="192951" g_stop="192898" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="588" r_stop="641" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="192897" i_stop="192819" i_length="79">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.782" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="192818" g_stop="192717" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="642" r_stop="743" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="192716" i_stop="192612" i_length="105">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="192611" g_stop="192523" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="744" r_stop="832" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="192522" i_stop="192422" i_length="101">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="192421" g_stop="192318" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="833" r_stop="936" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="192317" i_stop="192176" i_length="142">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="192175" g_stop="192107" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="937" r_stop="1005" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="192106" i_stop="192016" i_length="91">
            <donor d_prob="0.400" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="192015" g_stop="191900" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1006" r_stop="1121" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="191899" i_stop="191759" i_length="141">
            <donor d_prob="0.799" d_score="1.00"/>
            <acceptor a_prob="0.973" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="191758" g_stop="191724" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1122" r_stop="1156" r_length="35" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="191723" i_stop="191642" i_length="82">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="191641" g_stop="191499" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1157" r_stop="1299" r_length="143" r_score="0.986"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="191498" i_stop="190583" i_length="916">
            <donor d_prob="0.981" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="190582" g_stop="190460" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1300" r_stop="1422" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="190459" i_stop="190009" i_length="451">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="190008" g_stop="189687" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1423" r_stop="1744" r_length="322" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0123B22.1" gen_strand="-" ref_id="SGN-U584636" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1745</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0123B22.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U584636" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="195025" e_stop="194708"/>
          <exon e_start="194630" e_stop="194587"/>
          <exon e_start="194481" e_stop="194372"/>
          <exon e_start="194070" e_stop="194033"/>
          <exon e_start="193558" e_stop="193481"/>
          <exon e_start="192951" e_stop="192898"/>
          <exon e_start="192818" e_stop="192717"/>
          <exon e_start="192611" e_stop="192523"/>
          <exon e_start="192421" e_stop="192318"/>
          <exon e_start="192175" e_stop="192107"/>
          <exon e_start="192015" e_stop="191900"/>
          <exon e_start="191758" e_stop="191724"/>
          <exon e_start="191641" e_stop="191499"/>
          <exon e_start="190582" e_stop="190460"/>
          <exon e_start="190008" e_stop="189687"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGACAAACACAACCGAGTTTTCTCACAGCGGCATTGACAACTTCTTAAAGCCAACTAAAGTGTTATGCTCGCCGTCCGACCCAGACTCCGGTGTTCCTCCATGGCCGGCGTCGCTTCTTTTGTCTCATCTTCATCGGCTTCAGCATCATCTATAGCTAGTAAAAAATTCTATTTTCAAGTCAATTCCAATCGGCAGCTCTTCAATAACAGAGTATCTCTCACTACGCGAATCCCTAATGCCTCCATTCGGTGCTTCGCTTCCACCTCTGGTCCGACTAGCAAAATCCTCGTTCAAAATCCCATAGTCGAAATGGACGGTAATTTACTGCAGTTGAGATGAGTGCAAGCATATCTGTAATCATTCATCCACTCCTTTTAACTTTTTTTTTTGTAGGTGATGAAATGACGAGGGTTATATGGAAAATGATCAAAGACAAGGTATAATTATTGTCAGCTTCTGAATATATCTTTTAATTTTGTTTTGCCAATTTTTCTTATTATGCTTCTAAATCTTTTGTATATTTTTGCATCATGTGGTGGCAGCTAATCTATCCTTATCTAGAGTTGGATACAAAGTATTATGATTTAGGTATATTGAACCGTGATGCCACTGATGACCAAGTTACTGTTGAAAGTGCTGAGGCAACCCTGAAGTAAGTTCATTTACCTAAATGATTTGCACTGAGAAATTCACTGCTTTAGGTGATTAAATGTTGTTTTTTCTCCTTCAGAATTGAGTCCAACTTATTGTTTATTTAAACATCAGTTGAATTAGATTAATGTTTCAGTTTGAGAAGTTGGCTATCTTTGCGTTGTTTTGTTTTGCCCTTTTTTTGGTTGTTGTTGCAAATGCTTCTGTATTTCACAACAAAGCTAATTGTAGTCAATATCAGTTAATTGCTCAAAACATTCTAGTTCCAAACTTGAATTGGCTTATACTCCTTTAATGTGCAGATACAATGTTGCTGTGAAATGCGCTACTATAACACCTGGTCAGTTGTCTTTTCCAGTTTTAGAAAAGCTTTTGAGAAAGGTTAAAGGAGGAAATTTCTGCGTGATATTTAAATAATAAAGGTTCATGCTTTAGTCCAAATGTTTCATTTAAATGGTGGTTTCCAAATCACTTATGGCTCTCTCATATTTAGAGTTTGAATTTTTCAGAGTACATGAAGCTCCCGTGTGACCATAGATTTTAAAGTTGAAATTTGAAAATTTGAGTTTTGCAAGTTGGGTTTGGACATGCATTTTACTTGGAAATTTTGTGAGTGGAAGTCCCAACTCCCCAAAACCCCAAAACCCCAAAAGACCTTTTTTTTAGGAACTTGAAAATTTCATGGCCAAACAGATATTGAAGCTCAATTTTCAAAATCTACTCCCAAAATCTATGGCCAAACGCTAGTGAAGTTACGTGGAAGTTAGAAATTGCACTATGACACTTTCTAATTCTCCTACCATTGATGTTTCAGATGAGACCAGAGTCAAGGAATTTGGGCTGAAGTCTATGTGGAAAAGTCCCAATGGCACAATCAGAAACATTTTAAACGGTGTGCATGCAACTCAATTTGTTTGTATCTTAATGACAAGGTCTACTCTTGTGTATGATGTGCATCCATCATAATATGATAGCGTCTGGCACGCCGAGCATCTTATTGGTGCAGCAAGGATACTTTCCTTATCTGTAGATGCTTTTATGTTAAATCTCAGGAAATACTAAAGGTGGTAAATCATAAGATATCATATGCTTTTATTGTACACGGAGTGACAGTATACATTTCCCATTGGATTACTTGTAATTTACACTGAATGATTCATTGTACGTTAAGGAAATTCTAGCAGCCTTTTGTACTATAGTTTCTGGGAATGCTAGCTCGACAATATGTTGGACCATATAAAGAAATAATTGAGAAAAAGTTCTCACCTTCATTATACCTGTTTTCTTATTTGTTATTTCAGAAGTAGCTGATTCCGATTTGAGCTTTCTACTTTTAAAAGAAAGAAGATAAATAAGTAGATGCCGTACTTCCTAAATTCATTATCCTTAATGGATAGAATGATGACAGTTTCTGCCTTCAGGTACTGTTTTCCGGGAGCCTATACTATGCACGAACATTCCCAGGATTGTTCCTGGTAACATCTTCTTGATCTACTTTGTGGTATAAATCCAATATCATCAGTCTCGTCAGTACTTAACTTCTGAGATCTGCAGGTTGGAAGAAACCCATTTGTATTGGTAGGCATGCTTTTGGTGATCAGTATCGTGCCACAGATGCAATTATTAATGGGCCCGGAAAGCTCAAAATGGTTTTTGGTGAGCTAGTTGATTTCAGTCTGTATTTATTTTATGAGGCAAAACATACACATACGAAGCATACTCATGCCAATACTCAACTTGTTTGTTGATTTTTATTTTCAGTGCCGGAAAATGGGGAATCCCCTACGGAGCTGGATGTTTATGATTTTAAAGGTCCGGGTATTGCACTTGCCATGTACAATGTCGACCAGGTTCTTCTTCACTATGCTTGGATGAATGACTATGCTATTTCACTTCAAGCTTTTTCCTCTCTCTTGTATATTCATTCTTTTTCTGTGGTGAAATTTGCTAGTCAATTCGAGCATTTGCTGAATCATCAATGTCAATGGCATTTTCAAAGAAATGGCCTCTTTACTTGAGTACAAAAAACACAATTTTAAAGAAATACGATGGAAGGTATCCTTAATTTATGCTGATCAAATCATTTCCCTTCCAGCCCTGTCTAATTGAAAGCGGGGGGATACTATTTTGAATCTTCAGAAAATATATTTTTTAAGAGTTTAGCTGAATTATTCACCGTCAAATTTGATTGTGTCAGGTTTAAGGACATTTTTCAAGAGGTATACGAAGAGAAGTGGAAGCAACAGTTTGAGGAACACTCAATATGGTTGGTTTTTTATGAGATTAATGAGCAGTTTTTGTACTTCATTTCTGGAAAATGGTTGCATTATTGGTCAAAAGCTGTCTCTGGCATATAGGTATGAGCATAGACTGATAGATGACATGGTCGCTTATGTGTTAAAAAGCGAGGGTGGATATGTTTGGGCATGCAAGAACTATGATGGAGATGTCCAGAGTGATCTGCTCGCTCAAGGTGATCCTCATGATTGTACTCTGTTACTTCATTCTGTTCCTTCGAAATTCATGTCTTAGTTGAAGGTTTTGATTTGGCGTGATGATACAGTTACTATATCAACTTCTAAAAGTCTAACTAAGTCTATCTTTGTTATTTTAGGATTTGGTTCTCTGGGCCTCATGACTTCTGTATTGGTGGGTATCTTCCCGTTAAGCTTTCTTTGTAGAATATCGCACCCATTGGTCCTCTGTATAATAGAATGTATCTCCTCTGCAGTTATCTTCTGATGGCAAGACATTAGAAGCTGAAGCAGCTCACGGCACTGTAACAAGACATTTTCGGCTGCATCAAAAGGGTCAAGAAACTAGTACAAACAGTGTTGCTTCCATTTTTGCATGGACAAGGGGACTTGGACATAGGTGAGTTGCTGCTATTCTCTAACGGATTTGTTACTTTTACTGATTGGGGTAAACTTTTGTTCGTTGTTACTTGGGTAACTGGAAAAGTTGCTGACGTGTGACTAGGAGGTCACATGTTCGAGCTATGGATATAGCCTCTTGCAGAAAAACAAGAGACCCTTGTTGTCCGTCCCTTCCCCGGATCCTCCTGCCTAGCAGGAGCTTGGTGCACTTATTTTTTTATAGTTGGGACACGTTGCACTATTATGCACTACTTGATCCCTCTTCCCCTTTCTGCTCTCTCTCTCTCTCTCTCTACACACACACTCTAGAGGCTTTCCTCTTCTTTCCTTAATTTCTTGGGATTGGGTGAGGTTGCCTGTCTACCTAAACTATTATTATTTTTGCTTGCACCATCACTTGAATCAATTTTTCTGGCTTGGTGATATGACTATTACTAAAGTAGGTCGAATAATGAACTGATAGCCTGCTTGATATCATGTTGTCTCTATAATTAGATGGAAAAAAAGGGAAGAGTAGTGGATGCAAAAATGGATTCTGTACAAATTTTGTGTTACTCGCTGTGTCCATATAGCGGGTCTGGTTTTCCCTTATAAATGAAATTAAAATTTATTCCTGCTCTTTTCCATTTGTGCTCCTCTATATATGAAAGAACTCTCCTTGAGCAAGAGCCGAGAAGTATTTCCGATGTTTTTGAGGAAAGTTGAGGAATGGAAAGTCTACTTTTGTTATGGTGAGATTATTGGGGCACTCCAAAAGCAAACACAATACTGGTGTTCTATTCTTTTTCCATTTATTTTACTTTTAGGTAAGCGGACATTATCTAATTTGACAGAAAAACTAAAGGTGGCTGTTAATTTCCGATTTGAATGGATCTGTCTCTCAATGCCTAAAAATACACACTATTCTTCTGCAGGGCTCAGCTTGATGGGAATCAAAAGTTGTTGGAATTTGTTCACACCCTTGAAGCTTCTTGCATTGGGACAATAGAGTCCGGGAAGATGACTAAGGACTTAGCTATATTAGCTCACGGACCCAAGTAAGTGATGGTTTCCTGCTTCAGTGTCATCTGTACGGCATATATCATCCTGCTCTTTTTCTTTACTCCACACTTGGGATTTCTGATATCTCCTCTAACTGTCTGTCAACCCTTGCCCTACTCCTGGGTAAGGACAGAGTCCTCCTCCTCTTGGTATTTGCTACTCAAAATACCATGTATTTCGAGGTGCAAAAGATGTCCCTTACACCAATTTTATTTATTTTTTAATAAAGTGAACAATAAATTCTATAGCCTAAGCCACCTTGAATAATTATACTAAGAACTTTTCACCTTCTTACTGATAAATTCTTTATTATGAAAAATGTTTTTGACACAAAAACTTGATTCAGTTAGCAAGATAAACCAAATGAAGAGACGTTAACATGAATAGTCTGCGACTTCTCTCTTAATTTCAGTGAAACTCAGTATTTGAGTAATTATACTTTTGCAGGGTGTCAAGAGAATTCTACTTGAACACTGAAGAATTTATTGATGCTGTAGCACAGAAACTTCAAGAGAAGCTTCATGCCTCGGCGCCTATTTAAGTTGTACTGGATTATGTAGTGAGAACATACATGTATGAGCTGAAGAAGATCATGAGCAGCATCCTTTCACTGTTAACATAACTCTACTCACACTGCCCGTTGAGACATTCTTTACTCTAGTTTTTGTAGTTGTTCAGGTACAAGATAACAGGTTGTTGAGTGGTCCCTTCATACTGATCTTCAATGGGTTGTGTATATTATTGTCTCGTTTTATTTAGGATCCTTCAT</genome_strand>
        <mrna_strand>CGGAC-AACACAACCGAGTTTTCTCACAGCGGCATTGACAACTTCTTAAAGCCAACTAAAGTGTTATGCTCGCCGTCCGACCCAGACTCCGGTGTTCCTCCATGGCCGGCGTCGCTTCTTTTGTCTCATCTTCATCGGCTTCAGCATCATCTATAGCTAGTAAAAAATTCTATTTTCAAGTCAATTCCAATCGGCAGCTCTTCAATAACAGAGTATCTCTCACTACGCGAATCCCTAATGCCTCCATTCGGTGCTTCGCTTCCACCTCTGGTCCGACTAGCAAAATCCTCGTTCAAAATCCCATAGTCGAAATGGACG.............................................................................GTGATGAAATGACGAGGGTTATATGGAAAATGATCAAAGACAAG.........................................................................................................CTAATCTATCCTTATCTAGAGTTGGATACAAAGTATTATGATTTAGGTATATTGAACCGTGATGCCACTGATGACCAAGTTACTGTTGAAAGTGCTGAGGCAACCCTGAA.............................................................................................................................................................................................................................................................................................................ATACAATGTTGCTGTGAAATGCGCTACTATAACACCTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGACCAGAGTCAAGGAATTTGGGCTGAAGTCTATGTGGAAAAGTCCCAATGGCACAATCAGAAACATTTTAAACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTGTTTTCCGGGAGCCTATACTATGCACGAACATTCCCAGGATTGTTCCTG...............................................................................GTTGGAAGAAACCCATTTGTATTGGTAGGCATGCTTTTGGTGATCAGTATCGTGCCACAGATGCAATTATTAATGGGCCCGGAAAGCTCAAAATGGTTTTTG.........................................................................................................TGCCGGAAAATGGGGAATCCCCTACGGAGCTGGATGTTTATGATTTTAAAGGTCCGGGTATTGCACTTGCCATGTACAATGTCGACCAG.....................................................................................................TCAATTCGAGCATTTGCTGAATCATCAATGTCAATGGCATTTTCAAAGAAATGGCCTCTTTACTTGAGTACAAAAAACACAATTTTAAAGAAATACGATGGAAG..............................................................................................................................................GTTTAAGGACATTTTTCAAGAGGTATACGAAGAGAAGTGGAAGCAACAGTTTGAGGAACACTCAATATG...........................................................................................GTATGAGCATAGACTGATAGATGACATGGTCGCTTATGTGTTAAAAAGCGAGGGTGGATATGTTTGGGCATGCAAGAACTATGATGGAGATGTCCAGAGTGATCTGCTCGCTCAAG.............................................................................................................................................GATTTGGTTCTCTGGGCCTCATGACTTCTGTATTG..................................................................................TTATCTTCTGATGGCAAGACATTAGAAGCTGAAGCAGCTCACGGCACTGTAACAAGACATTTTCGGCTGCATCAAAAGGGTCAAGAAACTAGTACAAACAGTGTTGCTTCCATTTTTGCATGGACAAAGGGACTTGGACATAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCAGCTTGATGGGAATCAAAAGTTGTTGGAATTTGTTCACACCCTTGAAGCTTCTTGCATTGGGACAATAGAGTCCGGGAAGATGACTAAGGACTTAGCTATATTAGCTCACGGACCCAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGTCAAGAGAATTCTACTTGAACACTGAAGAATTTATTGATGCTGTAGCACAGAAACTTCAAGAGAAGCTTCATGCCTCGGCGCCTATTTAAGTTGTACTGGATTATGTAGTGAGAACATACATGTATGAGCTGAAGAAGATCATGAGCAGCATCCTTTCACTGTTAACATAACTCTACTCACACTGCCCGTTGAGACATTCTTTACTCTAGTTTTTGTAGTTGTTCAGGTACAAGATAACAGGTTGTTGAGTGGTCCCTTCATACTGATCTACAATGGGTTGTGTATATTATTGTCTCGTTTTATTTAGGATCCTTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_U_tomato" ref_id="SGN-U603640" ref_strand="+" ref_description="SGN-U603640 Tomato 200607#2 [1 ESTs aligned] (*GB) gi|157345435|emb|CAO14733.1| (e_value=4e-117) unnamed; (*ATH) AT5G14580.1 (e_value=9e-112)  Symbol: None | polyribonucleotide nucleotidyltransferase, putative, similar to Swiss-Prot:P05055 polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide phosphorylase) (PNPase) (Escherichia coli) | chr5:4697243-4703069 REVERSE | Alias... ; (*SWP) sp|Q39VA1|PNP_GEOMG (e_value=8e-47) Polyribonucleotide nucleotidyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=pnp; ">
      <seq>gccacgaggtgcaggtaatggcaagtgtgctttcatctgacgggaaacaagatccagatatattggcagctaatgcatcatctgctgctctaatgttgtcagatattccttggggtgggccaattggagtaatacgtattggaaggatttcaggtcaatttgttgtaaatccaagcatggaggagcttagcatcagtgatcttaacttggtatatgcatgtacgagggataaaactttgatgatagatgtccaagctcgtgaaatatctgaaaaggatttggaagctgctttgagacttgctcatccagaggctgttaagtatcttgaccctcaaattagactcgcagctaaagctgaccctacttatggaaagttcgagcgtggagaagctttggaaaaaatcacacaggacgttaaaagagctcttgaggaagaaggtgatgaggaaggcctaaaaattctaccaaagacagttgatacagtaaggaaacaggttgttcgcagaaggatcatttctgaagggcttagagtggacggaaggtgtcttgatgaagttaggcctttgtactgtgaagctggtaatttacctgtattacatggatctgcaattttttcaagaggggatactcaggtcctttgcactgttacccttggagcacctggggatgctcaacgtctggattccctggtcggtccttcaagcaagcgtttcatgctgcattatagctttccaccgttttgtacaaatgaagttggcaaacgaactggcctgaataggcgtgaagttggtcatggcactcttgctgaaaaggctctgcttgctgtattacccccggaagatgattttccata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLe0123B22-qs97f/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C02SLe0123B22.1" temp_strand="+" temp_description="C02SLe0123B22.1  AC215465.1 htgs_phase:3 submitted_to_sgn_as:C02SLe0123B22 sequenced_by:kribb upload_account_name:korea">
        <position start="199475" stop="202821"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="199774" g_stop="199787" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="14" r_length="14" r_score="0.929"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="199788" i_stop="199874" i_length="87">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="199875" g_stop="200045" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="185" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="200046" i_stop="200478" i_length="433">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.898" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="200479" g_stop="200604" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="311" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="200605" i_stop="200684" i_length="80">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="200685" g_stop="200730" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="357" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="200731" i_stop="200829" i_length="99">
            <donor d_prob="0.477" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="200830" g_stop="200846" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="374" r_length="17" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="200847" i_stop="200981" i_length="135">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.944" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="200982" g_stop="201101" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="494" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="201102" i_stop="201503" i_length="402">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="201504" g_stop="201641" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="495" r_stop="632" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="201642" i_stop="201757" i_length="116">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="201758" g_stop="201920" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="633" r_stop="795" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="201921" i_stop="202463" i_length="543">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="202464" g_stop="202521" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="796" r_stop="853" r_length="58" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLe0123B22.1" gen_strand="+" ref_id="SGN-U603640" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>853</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLe0123B22.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U603640" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="199774" e_stop="199787"/>
          <exon e_start="199875" e_stop="200045"/>
          <exon e_start="200479" e_stop="200604"/>
          <exon e_start="200685" e_stop="200730"/>
          <exon e_start="200830" e_stop="200846"/>
          <exon e_start="200982" e_stop="201101"/>
          <exon e_start="201504" e_stop="201641"/>
          <exon e_start="201758" e_stop="201920"/>
          <exon e_start="202464" e_stop="202521"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCACGAGGTGCAGGTAAGCTGGTGTCTTTTTATTGCAATTAACTTGATAGTAGTAGTTTGTTTGGCGGCTATAAGCTTCGCTGACTCACATTCTCCCCAGGTAATGGCAAGTGTGCTTTCATCTGACGGGAAACAAGATCCAGATATATTGGCAGCTAATGCATCATCTGCTGCTCTAATGTTGTCAGATATTCCTTGGGGTGGGCCAATTGGAGTAATACGTATTGGAAGGATTTCAGGTCAATTTGTTGTAAATCCAAGCATGGAGGAGGTAATATCTTATATCAGTTGGCATCCTCAGGATAAATTTAGAACGTTAATGCTTTCCAATTTCAGCAAGTTGACTTTCATTCTGGTGGCAGTTACGACCCTGGCATCTTGAGAACTTAGGCCATATCCTTGGGTGCTGTACTTGTTTACACTCTTAACAGAAGATGGTTGAATTAAGTGTAAGAAATGGAGCTTTGGGGCTCATGCAGAAGTTGTAGTTTCTTGATTATATAGCCACTGCTGGGTGTCAATAGTGGATAACTAGCTTAATTTCCAAGAATTTGCATACTAGGCAAACTATTTCTCTTCCATAATATTAGGAAGAACTACATAGTAAGAATATAACAAATGTTGTTGTCACTGATGCCAATTATGTCCACCAGTAATTGCAGTCCTGTCCCTTGATTGAAGTCTTCTTATTGGATGTCATGCAGCTTAGCATCAGTGATCTTAACTTGGTATATGCATGTACGAGGGATAAAACTTTGATGATAGATGTCCAAGCTCGTGAAATATCTGAAAAGGATTTGGAAGCTGCTTTGAGACTTGCTCATCCAGAGGTGAGACATTGCTGGCTATCAATTTGTCACTGCTTCTCCATAACTCCAAACCAATAATTTTGATTTTTTTGAATATTCAGGCTGTTAAGTATCTTGACCCTCAAATTAGACTCGCAGCTAAAGCTGGTAAGCAGAAGAAAGAGTATAAGCTGTCTATGGTATCAGAAAAAACATTTGAAAAGATTCAGAATCTGGCCAAAGAACCTATAGAAGCTGTTTTTACAGACCCTACTTATGGAAAGGTATCTATTTTCTTACTGGAAGATGAATTTAGGAACTTCACTGTTTTTCACTATTCATGTTATATAGTCTATTGATAAAGGCTGCAGGTACCTTCTTTTCACCTCATTAATACTATGTTTTCCATTCTTATTCAGTTCGAGCGTGGAGAAGCTTTGGAAAAAATCACACAGGACGTTAAAAGAGCTCTTGAGGAAGAAGGTGATGAGGAAGGCCTAAAAATTCTACCAAAGACAGTTGATACAGTAAGGAAACAGGTAAGCTTGTAGATGCTGAAGTTTATCTTTTGTGCTTCTGATTTTGAGGTTTTATGTTTACATCATTAATAAACAGAAAATTTTTGTTTCTTCTTTTCCTTTTGTTGATTGCAGAGGATCACATGATCAATGATTGACCTTCTAGGTTATTTCCTCATGCATTTTATCTTTGGCAAACTAATGTGTATTTCCCTCATGATTGGTCAATAGTAGGTTGCATGTGTTTTTTGGCTATATAAGTCCATTAGCAAACATTGACATATTCTAAATAAAGACTTCAATACTTCAGTTACTGCATTTTAAGGACTATTTGTTTGGGCTTCTTTTTACATCCTAAACTAAGGTTTTAGTCTTTTAATTCATTTTGTGATATTAACCTCCTCAAGTTTCTGACAACATCAGGTTGTTCGCAGAAGGATCATTTCTGAAGGGCTTAGAGTGGACGGAAGGTGTCTTGATGAAGTTAGGCCTTTGTACTGTGAAGCTGGTAATTTACCTGTATTACATGGATCTGCAATTTTTTCAAGAGGGGATACTCAGGTCAGTATATTCATTTTTCACTAAGAATACATGATGTACTATGATTAAGGGTTATCATCACTTGCAAATATGCAATCTTGTTGTCATTCATTATCCCTTATGAGATGTTTATACAGGTCCTTTGCACTGTTACCCTTGGAGCACCTGGGGATGCTCAACGTCTGGATTCCCTGGTCGGTCCTTCAAGCAAGCGTTTCATGCTGCATTATAGCTTTCCACCGTTTTGTACAAATGAAGTTGGCAAACGAACTGGCCTGAATAGGCGTGAAGTTGGTCATGGTAAGCCGTTCAGTTCTCAGGTTTATAATATGGTCTGCTCCTGAAGTTAGTGAAAGCTGTAAATGGACCTTAATACTAGATTGTCAATTTGCAGTTGTAACTTGTAATCAACCTCAGTATGTGGAAACATTTATGCCATTTTGTACCAACAACGAGGGAAGAGAAATGTTGATAATGTACTCTCTTCCCTTTCCCATTAACCTTATTTTTCTTGTTTTATTGTTGTTTCCTTGTTTCATGTAAAAACCAAATACTGGCTAAAGGAAAAAAAGAGAAGATCTTATGTCTCTCTCATGCAATATCGTAAAGTAGGGGTTGGGTTTCCTGCATTGTTCTTTATGTTTGATTAATAAATATTTATATCGTCTGGTATAACTGGTTCTAGTTTTTGAGTCTCTGTCCACTTGGATCATCTTTTGGGTTTCTTGGTCTTTCTGTTCATTTGCTACGTAATTTATGTTCGTGGTATCTTTTTCTAATTACGGCATCTCCAGGGTAATTTGTGGATCATTTTCTTGATACTAGATGCTTAATCTTCTACAGGCACTCTTGCTGAAAAGGCTCTGCTTGCTGTATTACCCCCGGAAGATGATTTTCCATA</genome_strand>
        <mrna_strand>GCCACGAGGTGCAG.......................................................................................GTAATGGCAAGTGTGCTTTCATCTGACGGGAAACAAGATCCAGATATATTGGCAGCTAATGCATCATCTGCTGCTCTAATGTTGTCAGATATTCCTTGGGGTGGGCCAATTGGAGTAATACGTATTGGAAGGATTTCAGGTCAATTTGTTGTAAATCCAAGCATGGAGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAGCATCAGTGATCTTAACTTGGTATATGCATGTACGAGGGATAAAACTTTGATGATAGATGTCCAAGCTCGTGAAATATCTGAAAAGGATTTGGAAGCTGCTTTGAGACTTGCTCATCCAGAG................................................................................GCTGTTAAGTATCTTGACCCTCAAATTAGACTCGCAGCTAAAGCTG...................................................................................................ACCCTACTTATGGAAAG.......................................................................................................................................TTCGAGCGTGGAGAAGCTTTGGAAAAAATCACACAGGACGTTAAAAGAGCTCTTGAGGAAGAAGGTGATGAGGAAGGCCTAAAAATTCTACCAAAGACAGTTGATACAGTAAGGAAACAG..................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTCGCAGAAGGATCATTTCTGAAGGGCTTAGAGTGGACGGAAGGTGTCTTGATGAAGTTAGGCCTTTGTACTGTGAAGCTGGTAATTTACCTGTATTACATGGATCTGCAATTTTTTCAAGAGGGGATACTCAG....................................................................................................................GTCCTTTGCACTGTTACCCTTGGAGCACCTGGGGATGCTCAACGTCTGGATTCCCTGGTCGGTCCTTCAAGCAAGCGTTTCATGCTGCATTATAGCTTTCCACCGTTTTGTACAAATGAAGTTGGCAAACGAACTGGCCTGAATAGGCGTGAAGTTGGTCATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTCTTGCTGAAAAGGCTCTGCTTGCTGTATTACCCCCGGAAGATGATTTTCCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>15</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="39562" PGL_stop="40114"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="39562" e_stop="40114"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="39562" e_stop="40114" e_length="553"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39562" stop="40114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U600540" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATCTTTTTAGAAAAATCTAGTGAGAAAAAATAATTAAGAAAAAAAAACTGTAGCACATATTTTAACCCCGATGATGAATACCACGATTGAGATGGTTAAATTTTCGCATTCCAGTCTTGTCTATTATCTTATGAAGAGTTAAGGCTGGTAAAGATTTAGTGAATAGATCTGCTGAATTATCTCTTCAACGAATCGCTTCAACGGATTTATTGTATATCATTTTCACCATTATTCTGAAGATCATGAGTGAAGAATAATTTTGGGAAAAAGTGTTTCGCTCTATCTCTTTTTATGAAGCTTCCTCTTAATTGAGCTATGCATGCAACACTATCTTCAAAGAGCACGGTGGGTACCTTGACATTAGACTTCAAACCACATCTTTTTTTGATGAAATGTTTCAGTGATCTCAATCATACACATTCTCTACGTGTTCCATGAATGACTATTATTTCAACATGATTTGAAGAAGTAGCGATAATAGATTGCTTTCTAGATCCCCATGATATAATTGTACCTCCGTATGTGAATAGATAGCCCATTTGAGATCAAACT</gDNA_template>
            <first_frame> N  L  F  R  K  I  *  *  E  K  I  I  K  K  K  K  L  *  H  I  F  *  P  R  *  *  I  P  R  L  R  W  L  N  F  R  I  P  V  L  S  I  I  L  *  R  V  K  A  G  K  D  L  V  N  R  S  A  E  L  S  L  Q  R  I  A  S  T  D  L  L  Y  I  I  F  T  I  I  L  K  I  M  S  E  E  *  F  W  E  K  V  F  R  S  I  S  F  Y  E  A  S  S  *  L  S  Y  A  C  N  T  I  F  K  E  H  G  G  Y  L  D  I  R  L  Q  T  T  S  F  F  D  E  M  F  Q  *  S  Q  S  Y  T  F  S  T  C  S  M  N  D  Y  Y  F  N  M  I  *  R  S  S  D  N  R  L  L  S  R  S  P  *  Y  N  C  T  S  V  C  E  *  I  A  H  L  R  S  N  </first_frame>
            <second_frame>  I  F  L  E  K  S  S  E  K  K  *  L  R  K  K  N  C  S  T  Y  F  N  P  D  D  E  Y  H  D  *  D  G  *  I  F  A  F  Q  S  C  L  L  S  Y  E  E  L  R  L  V  K  I  *  *  I  D  L  L  N  Y  L  F  N  E  S  L  Q  R  I  Y  C  I  S  F  S  P  L  F  *  R  S  *  V  K  N  N  F  G  K  K  C  F  A  L  S  L  F  M  K  L  P  L  N  *  A  M  H  A  T  L  S  S  K  S  T  V  G  T  L  T  L  D  F  K  P  H  L  F  L  M  K  C  F  S  D  L  N  H  T  H  S  L  R  V  P  *  M  T  I  I  S  T  *  F  E  E  V  A  I  I  D  C  F  L  D  P  H  D  I  I  V  P  P  Y  V  N  R  *  P  I  *  D  Q  T </second_frame>
            <third_frame>   S  F  *  K  N  L  V  R  K  N  N  *  E  K  K  T  V  A  H  I  L  T  P  M  M  N  T  T  I  E  M  V  K  F  S  H  S  S  L  V  Y  Y  L  M  K  S  *  G  W  *  R  F  S  E  *  I  C  *  I  I  S  S  T  N  R  F  N  G  F  I  V  Y  H  F  H  H  Y  S  E  D  H  E  *  R  I  I  L  G  K  S  V  S  L  Y  L  F  L  *  S  F  L  L  I  E  L  C  M  Q  H  Y  L  Q  R  A  R  W  V  P  *  H  *  T  S  N  H  I  F  F  *  *  N  V  S  V  I  S  I  I  H  I  L  Y  V  F  H  E  *  L  L  F  Q  H  D  L  K  K  *  R  *  *  I  A  F  *  I  P  M  I  *  L  Y  L  R  M  *  I  D  S  P  F  E  I  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0123B22.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="59672" PGL_stop="59997"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59672" e_stop="59997"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.933"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.933">
            <gDNA_exon_boundary e_start="59672" e_stop="59997" e_length="326"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59672" stop="59997"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U591718" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGGATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAGTTTGGAGAAAGCTAAGTCATACCCAGAATCACATCGAAGTCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGCTCCCCATAAAAGTTACAAGACAAGACCTATACACATTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAATCAATTCACAATGTAAATTAAGACCAGTAGCGAATGAGGAAGATACATATGAAAATGTGGAGCCAGGTTCAAATAATACATAAGCCATACAATCAC</gDNA_template>
            <first_frame> R  I  C  P  R  L  G  *  R  H  S  F  S  I  T  I  Q  D  C  K  V  W  R  K  L  S  H  T  Q  N  H  I  E  V  N  H  F  *  D  N  Q  V  Y  M  S  I  A  P  H  K  S  Y  K  T  R  P  I  H  I  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  V  N  Q  F  T  M  *  I  K  T  S  S  E  *  G  R  Y  I  *  K  C  G  A  R  F  K  *  Y  I  S  H  T  I   </first_frame>
            <second_frame>  G  S  V  P  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  K  F  G  E  S  *  V  I  P  R  I  T  S  K  S  T  I  S  K  I  T  K  S  T  *  V  L  L  P  I  K  V  T  R  Q  D  L  Y  T  F  S  T  I  T  D  S  P  T  G  V  E  T  R  I  G  M  S  I  N  S  Q  C  K  L  R  P  V  A  N  E  E  D  T  Y  E  N  V  E  P  G  S  N  N  T  *  A  I  Q  S  </second_frame>
            <third_frame>   D  L  S  Q  A  W  L  T  S  Q  F  *  H  Y  N  P  R  L  Q  S  L  E  K  A  K  S  Y  P  E  S  H  R  S  Q  P  F  L  R  *  P  S  L  H  E  Y  C  S  P  *  K  L  Q  D  K  T  Y  T  H  F  Q  L  S  Q  T  H  P  P  E  *  K  H  E  *  A  C  Q  S  I  H  N  V  N  *  D  Q  *  R  M  R  K  I  H  M  K  M  W  S  Q  V  Q  I  I  H  K  P  Y  N  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0123B22.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="61354" PGL_stop="60799"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61354" e_stop="60799"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.906"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.906">
            <gDNA_exon_boundary e_start="61354" e_stop="60799" e_length="556"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61354" stop="60799"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U590648" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCACCTAGCCCATCTGATACTAGGGCGGTGACTCCTCCACCGACTGAAGAAGTAGTAAGAGAGGGTGAGGAAGGGGAAACTGAGCAAGTGCAAAATGAGGAACTACCACCAAAACCTACCCCACAGATGATAAATCAGGTTCTTGCTTATCTTAGTGGGTTATCTGATCAAGGTCAAACACCTCCAGTGTTTTCTGCACCAGCACCTCAGGTTCCGGAAGTACAACAGCCAACTGCTGCGGCTCCCCGCACGGATGTTCCATTGGAAATAGGCACGTTTCCTCGTCTGACTACAGGGCCTATAATGACAAATGATCAACATGAACTTTTTAGTAAGTTCTTGAAATTGAAACCTCCAGTCTTCAAGGGTGCTAAATCTAATGATGCCTATGATTTTCTAGTTGACTGTCATGAGCTACTACACAAGATGGGTATAGTAGAACAGTTTGGTGTTGAGTTTGTGACTTATCAGTTTCAAGGGAACGCCAAAATGTGGTGGCGGTCACATGTTGAGTGTCAACCAACAGAGGCACCACCTATGACTTGGGCATAATTCT</gDNA_template>
            <first_frame> A  P  S  P  S  D  T  R  A  V  T  P  P  P  T  E  E  V  V  R  E  G  E  E  G  E  T  E  Q  V  Q  N  E  E  L  P  P  K  P  T  P  Q  M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  Q  T  P  P  V  F  S  A  P  A  P  Q  V  P  E  V  Q  Q  P  T  A  A  A  P  R  T  D  V  P  L  E  I  G  T  F  P  R  L  T  T  G  P  I  M  T  N  D  Q  H  E  L  F  S  K  F  L  K  L  K  P  P  V  F  K  G  A  K  S  N  D  A  Y  D  F  L  V  D  C  H  E  L  L  H  K  M  G  I  V  E  Q  F  G  V  E  F  V  T  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  H  V  E  C  Q  P  T  E  A  P  P  M  T  W  A  *  F  </first_frame>
            <second_frame>  H  L  A  H  L  I  L  G  R  *  L  L  H  R  L  K  K  *  *  E  R  V  R  K  G  K  L  S  K  C  K  M  R  N  Y  H  Q  N  L  P  H  R  *  *  I  R  F  L  L  I  L  V  G  Y  L  I  K  V  K  H  L  Q  C  F  L  H  Q  H  L  R  F  R  K  Y  N  S  Q  L  L  R  L  P  A  R  M  F  H  W  K  *  A  R  F  L  V  *  L  Q  G  L  *  *  Q  M  I  N  M  N  F  L  V  S  S  *  N  *  N  L  Q  S  S  R  V  L  N  L  M  M  P  M  I  F  *  L  T  V  M  S  Y  Y  T  R  W  V  *  *  N  S  L  V  L  S  L  *  L  I  S  F  K  G  T  P  K  C  G  G  G  H  M  L  S  V  N  Q  Q  R  H  H  L  *  L  G  H  N  S </second_frame>
            <third_frame>   T  *  P  I  *  Y  *  G  G  D  S  S  T  D  *  R  S  S  K  R  G  *  G  R  G  N  *  A  S  A  K  *  G  T  T  T  K  T  Y  P  T  D  D  K  S  G  S  C  L  S  *  W  V  I  *  S  R  S  N  T  S  S  V  F  C  T  S  T  S  G  S  G  S  T  T  A  N  C  C  G  S  P  H  G  C  S  I  G  N  R  H  V  S  S  S  D  Y  R  A  Y  N  D  K  *  S  T  *  T  F  *  *  V  L  E  I  E  T  S  S  L  Q  G  C  *  I  *  *  C  L  *  F  S  S  *  L  S  *  A  T  T  Q  D  G  Y  S  R  T  V  W  C  *  V  C  D  L  S  V  S  R  E  R  Q  N  V  V  A  V  T  C  *  V  S  T  N  R  G  T  T  Y  D  L  G  I  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0123B22.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61354" stop="60803"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>549</number_coding_nucleotides>
                  <number_encoded_amino_acids>183</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>APSPSDTRAVTPPPTEEVVREGEEGETEQVQNEELPPKPTPQMINQVLAYLSGLSDQGQTPPVFSAPAPQVPEVQQPTAAAPRTDVPLEIGTFPRLTTGPIMTNDQHELFSKFLKLKPPVFKGAKSNDAYDFLVDCHELLHKMGIVEQFGVEFVTYQFQGNAKMWWRSHVECQPTEAPPMTWA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="121887" PGL_stop="120623"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="121887" e_stop="120623"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="121887" e_stop="120623" e_length="1265"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121887" stop="120623"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U573604" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGCTTTGATTTGACAGTCGAAAAATCTTTAAGCTTAATCATGTAAAGTATATTCTATCCATATTAATTAACATGCACAAATTACAAAATTAAAACATGTCACCCCTACATTAAATTTTGTCAATTTATTATTCTCTCTTCCTATAGATATAGGTAAAATAAAAAAATATAGGTCCTCATTCAGCCACCATAATTAGTAAAGCAAGGACAATTGTTCGACAGGAATTTGGCCTTCCATTATTACCATTGAATATGACATATGAATTTAAGTTTTTGAACTTTTGCTTTTTGAGTTTTTCAAATATGTTATAATATCTCCTTAATATATATGCACTTTACACATGTGTAAAAAACAAAAATTATTTATTTTTTCATATTATCAATATATATAAAAAAATTTAAAAAATAATTACGGTCTCGGTTCTATCAAATGAAAAATGATAAGAAGCAAAGGCTTGCAAATAGCTTTGATTGAAGTAGACGGATAACTTATTGTTTTGGTTCATCACAAAAAACAAGGGGTCCTTCTTGTACCTTAGATGTTTTTAGTGTATATCGAAAATAATATTTGAAATAGAAAAAAATTCGTAAAAATTATGTTTGATACGGAGAAAGTCATTTTCCAAGTAAGTATTAGAAAGTCATTTGCTGGTATGCATGTATTTAACTGTTAAAAGGGGATTTTTTTTCTTTCAAAAACCTCTCTTTATAATCCAATTTTTTTCATAATTTTAGGATCGAGAATATGAGGTAATTATCATTTGAGCAACTCTCGGTTATCCCTCTCTATATATAGCAAAACATTGAAACTGGTTAAAATCACTTCCCCTTGAGGATAGTTTAAGTTATGTATATATAAATTAAGTTTGATATGATAACTCACAAATAGAAAGAATAACCTTTTACAATCAATTAAATTGAGCTGATAATGTAAAATATCGGTATATATAACTGAAATATGCATGTATACAAGCAGTGGGACTTCAAATATCAGCCACAGAACATGTATACAACCTCGATTCTTTACCAAAAATTAAACGTGACTTAAAAGTTTAATTTCAATATAATCTGAAATAAGTAGTTTTCATTCATTTCATATTTAGTGTCTTAATTTCACTATACACAAAGGTTAAAGAATGAAAAGAAGATAATCTGTGATCTTAAATATAATTAATAATGTATATTTTAAATTTTATTATCTTAAATTTATCAGGAAAAATATTGAAATTGAAATACTTATTAAATATATATATAAAAAAACCACTC</gDNA_template>
            <first_frame> G  F  D  L  T  V  E  K  S  L  S  L  I  M  *  S  I  F  Y  P  Y  *  L  T  C  T  N  Y  K  I  K  T  C  H  P  Y  I  K  F  C  Q  F  I  I  L  S  S  Y  R  Y  R  *  N  K  K  I  *  V  L  I  Q  P  P  *  L  V  K  Q  G  Q  L  F  D  R  N  L  A  F  H  Y  Y  H  *  I  *  H  M  N  L  S  F  *  T  F  A  F  *  V  F  Q  I  C  Y  N  I  S  L  I  Y  M  H  F  T  H  V  *  K  T  K  I  I  Y  F  F  I  L  S  I  Y  I  K  K  F  K  K  *  L  R  S  R  F  Y  Q  M  K  N  D  K  K  Q  R  L  A  N  S  F  D  *  S  R  R  I  T  Y  C  F  G  S  S  Q  K  T  R  G  P  S  C  T  L  D  V  F  S  V  Y  R  K  *  Y  L  K  *  K  K  I  R  K  N  Y  V  *  Y  G  E  S  H  F  P  S  K  Y  *  K  V  I  C  W  Y  A  C  I  *  L  L  K  G  D  F  F  S  F  K  N  L  S  L  *  S  N  F  F  H  N  F  R  I  E  N  M  R  *  L  S  F  E  Q  L  S  V  I  P  L  Y  I  *  Q  N  I  E  T  G  *  N  H  F  P  L  R  I  V  *  V  M  Y  I  *  I  K  F  D  M  I  T  H  K  *  K  E  *  P  F  T  I  N  *  I  E  L  I  M  *  N  I  G  I  Y  N  *  N  M  H  V  Y  K  Q  W  D  F  K  Y  Q  P  Q  N  M  Y  T  T  S  I  L  Y  Q  K  L  N  V  T  *  K  F  N  F  N  I  I  *  N  K  *  F  S  F  I  S  Y  L  V  S  *  F  H  Y  T  Q  R  L  K  N  E  K  K  I  I  C  D  L  K  Y  N  *  *  C  I  F  *  I  L  L  S  *  I  Y  Q  E  K  Y  *  N  *  N  T  Y  *  I  Y  I  *  K  N  H   </first_frame>
            <second_frame>  A  L  I  *  Q  S  K  N  L  *  A  *  S  C  K  V  Y  S  I  H  I  N  *  H  A  Q  I  T  K  L  K  H  V  T  P  T  L  N  F  V  N  L  L  F  S  L  P  I  D  I  G  K  I  K  K  Y  R  S  S  F  S  H  H  N  *  *  S  K  D  N  C  S  T  G  I  W  P  S  I  I  T  I  E  Y  D  I  *  I  *  V  F  E  L  L  L  F  E  F  F  K  Y  V  I  I  S  P  *  Y  I  C  T  L  H  M  C  K  K  Q  K  L  F  I  F  S  Y  Y  Q  Y  I  *  K  N  L  K  N  N  Y  G  L  G  S  I  K  *  K  M  I  R  S  K  G  L  Q  I  A  L  I  E  V  D  G  *  L  I  V  L  V  H  H  K  K  Q  G  V  L  L  V  P  *  M  F  L  V  Y  I  E  N  N  I  *  N  R  K  K  F  V  K  I  M  F  D  T  E  K  V  I  F  Q  V  S  I  R  K  S  F  A  G  M  H  V  F  N  C  *  K  G  I  F  F  L  S  K  T  S  L  Y  N  P  I  F  F  I  I  L  G  S  R  I  *  G  N  Y  H  L  S  N  S  R  L  S  L  S  I  Y  S  K  T  L  K  L  V  K  I  T  S  P  *  G  *  F  K  L  C  I  Y  K  L  S  L  I  *  *  L  T  N  R  K  N  N  L  L  Q  S  I  K  L  S  *  *  C  K  I  S  V  Y  I  T  E  I  C  M  Y  T  S  S  G  T  S  N  I  S  H  R  T  C  I  Q  P  R  F  F  T  K  N  *  T  *  L  K  S  L  I  S  I  *  S  E  I  S  S  F  H  S  F  H  I  *  C  L  N  F  T  I  H  K  G  *  R  M  K  R  R  *  S  V  I  L  N  I  I  N  N  V  Y  F  K  F  Y  Y  L  K  F  I  R  K  N  I  E  I  E  I  L  I  K  Y  I  Y  K  K  T  T  </second_frame>
            <third_frame>   L  *  F  D  S  R  K  I  F  K  L  N  H  V  K  Y  I  L  S  I  L  I  N  M  H  K  L  Q  N  *  N  M  S  P  L  H  *  I  L  S  I  Y  Y  S  L  F  L  *  I  *  V  K  *  K  N  I  G  P  H  S  A  T  I  I  S  K  A  R  T  I  V  R  Q  E  F  G  L  P  L  L  P  L  N  M  T  Y  E  F  K  F  L  N  F  C  F  L  S  F  S  N  M  L  *  Y  L  L  N  I  Y  A  L  Y  T  C  V  K  N  K  N  Y  L  F  F  H  I  I  N  I  Y  K  K  I  *  K  I  I  T  V  S  V  L  S  N  E  K  *  *  E  A  K  A  C  K  *  L  *  L  K  *  T  D  N  L  L  F  W  F  I  T  K  N  K  G  S  F  L  Y  L  R  C  F  *  C  I  S  K  I  I  F  E  I  E  K  N  S  *  K  L  C  L  I  R  R  K  S  F  S  K  *  V  L  E  S  H  L  L  V  C  M  Y  L  T  V  K  R  G  F  F  F  F  Q  K  P  L  F  I  I  Q  F  F  S  *  F  *  D  R  E  Y  E  V  I  I  I  *  A  T  L  G  Y  P  S  L  Y  I  A  K  H  *  N  W  L  K  S  L  P  L  E  D  S  L  S  Y  V  Y  I  N  *  V  *  Y  D  N  S  Q  I  E  R  I  T  F  Y  N  Q  L  N  *  A  D  N  V  K  Y  R  Y  I  *  L  K  Y  A  C  I  Q  A  V  G  L  Q  I  S  A  T  E  H  V  Y  N  L  D  S  L  P  K  I  K  R  D  L  K  V  *  F  Q  Y  N  L  K  *  V  V  F  I  H  F  I  F  S  V  L  I  S  L  Y  T  K  V  K  E  *  K  E  D  N  L  *  S  *  I  *  L  I  M  Y  I  L  N  F  I  I  L  N  L  S  G  K  I  L  K  L  K  Y  L  L  N  I  Y  I  K  K  P  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0123B22.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="122996" PGL_stop="122368"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="122996" e_stop="122812"/>
            <exon e_start="122737" e_stop="122368"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.982" e_score="0.995"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="122996" e_stop="122812" e_length="185"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.982">
            <gDNA_intron_boundary i_start="122811" i_stop="122738" i_length="74"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="122737" e_stop="122368" e_length="370"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="122996" stop="122812"/>
              <exon start="122737" stop="122368"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U602726" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTTTCTTCACATCCCATTCCTCTTCTCTTCTTTATTATATAAAAAAAATGGATAAAAGAACATGTGATTCTCAAGATGTTGAAGTTAGGAAAGGTCCTTGGACTATGGAAGAAGATTTGATTCTCATCAATTACATTGCTAATCATGGTGAAGGTGTTTGGAATTCCCTCGCTCGATCCGCTG : GTTTGAAGCGTACTGGAAAAAGTTGTAGACTTAGATGGCTTAATTATCTCCGACCTGATGTTCGGAGGGGAAATATTACACCGGAGGAACAATTGTTGATCATGGAACTACATGCCAAGTGGGGAAACCGGTGAGTTGATTTCTTTTTCTAGCTAGGGTTTTGATAATTAAATAAAATGATGAAATTATATAAAAGAAAATTTGGAAAATTGTAGAAATTTCTCCTTCATTTTTTTAAAAATGAAAAATAAAAAAAATCTCCCATGTGTTTGTATGTGTTGGATGGATAAAGAGGAATTGTCCCAAAATCTCTTAGAACTAGATTTGACATCATGAAAGAGAGTGATGGGGAATTTACAACGTGTTTAAT</gDNA_template>
            <first_frame> F  F  L  H  I  P  F  L  F  S  S  L  L  Y  K  K  N  G  *  K  N  M  *  F  S  R  C  *  S  *  E  R  S  L  D  Y  G  R  R  F  D  S  H  Q  L  H  C  *  S  W  *  R  C  L  E  F  P  R  S  I  R  W :   F  E  A  Y  W  K  K  L  *  T  *  M  A  *  L  S  P  T  *  C  S  E  G  K  Y  Y  T  G  G  T  I  V  D  H  G  T  T  C  Q  V  G  K  P  V  S  *  F  L  F  L  A  R  V  L  I  I  K  *  N  D  E  I  I  *  K  K  I  W  K  I  V  E  I  S  P  S  F  F  *  K  *  K  I  K  K  I  S  H  V  F  V  C  V  G  W  I  K  R  N  C  P  K  I  S  *  N  *  I  *  H  H  E  R  E  *  W  G  I  Y  N  V  F  N </first_frame>
            <second_frame>  F  F  F  T  S  H  S  S  S  L  L  Y  Y  I  K  K  M  D  K  R  T  C  D  S  Q  D  V  E  V  R  K  G  P  W  T  M  E  E  D  L  I  L  I  N  Y  I  A  N  H  G  E  G  V  W  N  S  L  A  R  S  A   : G  L  K  R  T  G  K  S  C  R  L  R  W  L  N  Y  L  R  P  D  V  R  R  G  N  I  T  P  E  E  Q  L  L  I  M  E  L  H  A  K  W  G  N  R  *  V  D  F  F  F  *  L  G  F  *  *  L  N  K  M  M  K  L  Y  K  R  K  F  G  K  L  *  K  F  L  L  H  F  F  K  N  E  K  *  K  K  S  P  M  C  L  Y  V  L  D  G  *  R  G  I  V  P  K  S  L  R  T  R  F  D  I  M  K  E  S  D  G  E  F  T  T  C  L   </second_frame>
            <third_frame>   F  S  S  H  P  I  P  L  L  F  F  I  I  *  K  K  W  I  K  E  H  V  I  L  K  M  L  K  L  G  K  V  L  G  L  W  K  K  I  *  F  S  S  I  T  L  L  I  M  V  K  V  F  G  I  P  S  L  D  P  L  :  V  *  S  V  L  E  K  V  V  D  L  D  G  L  I  I  S  D  L  M  F  G  G  E  I  L  H  R  R  N  N  C  *  S  W  N  Y  M  P  S  G  E  T  G  E  L  I  S  F  S  S  *  G  F  D  N  *  I  K  *  *  N  Y  I  K  E  N  L  E  N  C  R  N  F  S  F  I  F  L  K  M  K  N  K  K  N  L  P  C  V  C  M  C  W  M  D  K  E  E  L  S  Q  N  L  L  E  L  D  L  T  S  *  K  R  V  M  G  N  L  Q  R  V  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0123B22.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="122995" stop="122812"/>
                    <exon start="122737" stop="122604"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>315</number_coding_nucleotides>
                  <number_encoded_amino_acids>105</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFFTSHSSSLLYYIKKMDKRTCDSQDVEVRKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="132255" PGL_stop="135705"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="132255" e_stop="132552"/>
            <exon e_start="132647" e_stop="132785"/>
            <exon e_start="133276" e_stop="133468"/>
            <exon e_start="134505" e_stop="134615"/>
            <exon e_start="135044" e_stop="135106"/>
            <exon e_start="135196" e_stop="135326"/>
            <exon e_start="135406" e_stop="135705"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.947" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.204" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.448" e_score="1.000"/>
          <exon-intron don_prob="0.537" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.930" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="132255" e_stop="132552" e_length="298"/>
          </exon>
          <intron i_serial="1" don_prob="0.947" acc_prob="0.996">
            <gDNA_intron_boundary i_start="132553" i_stop="132646" i_length="94"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="132647" e_stop="132785" e_length="139"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.993">
            <gDNA_intron_boundary i_start="132786" i_stop="133275" i_length="490"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="133276" e_stop="133468" e_length="193"/>
          </exon>
          <intron i_serial="3" don_prob="0.204" acc_prob="1.000">
            <gDNA_intron_boundary i_start="133469" i_stop="134504" i_length="1036"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="134505" e_stop="134615" e_length="111"/>
          </exon>
          <intron i_serial="4" don_prob="0.977" acc_prob="0.448">
            <gDNA_intron_boundary i_start="134616" i_stop="135043" i_length="428"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="135044" e_stop="135106" e_length="63"/>
          </exon>
          <intron i_serial="5" don_prob="0.537" acc_prob="0.999">
            <gDNA_intron_boundary i_start="135107" i_stop="135195" i_length="89"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="135196" e_stop="135326" e_length="131"/>
          </exon>
          <intron i_serial="6" don_prob="0.930" acc_prob="0.987">
            <gDNA_intron_boundary i_start="135327" i_stop="135405" i_length="79"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="135406" e_stop="135705" e_length="300"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132255" stop="132552"/>
              <exon start="132647" stop="132785"/>
              <exon start="133276" stop="133468"/>
              <exon start="134505" stop="134615"/>
              <exon start="135044" stop="135106"/>
              <exon start="135196" stop="135326"/>
              <exon start="135406" stop="135705"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565237" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACGAAGGACAAAATTAGTAATATTTGCATCTGTAGAGGTGAAATTGTCCGTTTTGTTGTGTGGCAAATGGCAATGGCTGCCGCAAGTTGGGCATCTTCTTCTTCGTTCACTCGCTTTCTCCGGCCTCTCCTCAGTCGGAACTCGTCTCCCTCCCCTATCAGTTACAGTCTTCATCGATATAAATCAGCTAACTGTTTATTTTTCTCCGCAAGCAGTAATAAACCTCCAAAATTAGCTGTTTATGCTCAAGCTAGGCGAGTTTTATCTTCCAAAACCAAAGGAGATGAAATAGCAACTC : CTGCTGACTTGAGCTTCGTGGTTCCATTGAAAATTGTGGAGTATCCAGACCCGATTTTAAGAGCGAAGAATAAGAGGATTGACAATTTTGACGCTAATTTGAAGAAGTTAGTTGATGAAATGTTCGATATTATGTACAA : AACTGATGGCATTGGGCTGTCTGCACCACAAGTTGGAATGAATGTTCAACTAATGGTATTTAATGCAGCCGGTGAACGTGGAGAGGGGGAGGAGATTGTTCTCGTCAATCCACGTGTCAGTAGATATTCTAGGAGGATTATACCTTATGAAGAAGGTTGCTTATCTTTTCCAATGATACATGGTGATGTTAAG : AGACCAGAGTCAGTTAAGGTTGACGCACAGGACATTAATGGTACAAGGTTTGAGATAAGCTTGTCTGCTCTTCCAGCACGAGTCTTCCAACATGAATTTGATCACCTACAG : GGAGTTCTTTTCTTTGACAAAATGACTGACGAAGTCCTGGACACCATTCGTGAAAAATTAGTG : GCGCTAGAAAAGAAATATGAAGATAGGACTGGGTTGCCAACCCCTGAAAGCATAAATACACGAAAAATAAAGAAGGCTGCTGTTGGATTTGGCAAATCATGAATTTACTGGGATCTATGAAATCTTCTCAG : TATTTGTATGATGAAGCACAAAATGGGATTGCCAGCTTTTGCTGAACTTTGGTATATGCCATTAATTTAGACACTTGTGCTTTGTGAAACTAGCCAAAAGTGTGGCCTCTGAGGTTTATCCTTGTACTGATACTGCTCTGTTTAGGAATGATAGGGTTACCACAGAAATTTGTATGGAAAAAGAACTGTTAAGTACATTTGATCAAATATTGAACACCAAGTTTGTCGTTTAACACTTGGGTTGTTGTAGTTCAGTGTGGAGAAAAACAACTCAAGAGAAGTTCCATAAGTTCCCCAGCA</gDNA_template>
            <first_frame> T  K  D  K  I  S  N  I  C  I  C  R  G  E  I  V  R  F  V  V  W  Q  M  A  M  A  A  A  S  W  A  S  S  S  S  F  T  R  F  L  R  P  L  L  S  R  N  S  S  P  S  P  I  S  Y  S  L  H  R  Y  K  S  A  N  C  L  F  F  S  A  S  S  N  K  P  P  K  L  A  V  Y  A  Q  A  R  R  V  L  S  S  K  T  K  G  D  E  I  A  T   : P  A  D  L  S  F  V  V  P  L  K  I  V  E  Y  P  D  P  I  L  R  A  K  N  K  R  I  D  N  F  D  A  N  L  K  K  L  V  D  E  M  F  D  I  M  Y  K :   T  D  G  I  G  L  S  A  P  Q  V  G  M  N  V  Q  L  M  V  F  N  A  A  G  E  R  G  E  G  E  E  I  V  L  V  N  P  R  V  S  R  Y  S  R  R  I  I  P  Y  E  E  G  C  L  S  F  P  M  I  H  G  D  V  K  :  R  P  E  S  V  K  V  D  A  Q  D  I  N  G  T  R  F  E  I  S  L  S  A  L  P  A  R  V  F  Q  H  E  F  D  H  L  Q  :  G  V  L  F  F  D  K  M  T  D  E  V  L  D  T  I  R  E  K  L  V  :  A  L  E  K  K  Y  E  D  R  T  G  L  P  T  P  E  S  I  N  T  R  K  I  K  K  A  A  V  G  F  G  K  S  *  I  Y  W  D  L  *  N  L  L  S :   I  C  M  M  K  H  K  M  G  L  P  A  F  A  E  L  W  Y  M  P  L  I  *  T  L  V  L  C  E  T  S  Q  K  C  G  L  *  G  L  S  L  Y  *  Y  C  S  V  *  E  *  *  G  Y  H  R  N  L  Y  G  K  R  T  V  K  Y  I  *  S  N  I  E  H  Q  V  C  R  L  T  L  G  L  L  *  F  S  V  E  K  N  N  S  R  E  V  P  *  V  P  Q   </first_frame>
            <second_frame>  R  R  T  K  L  V  I  F  A  S  V  E  V  K  L  S  V  L  L  C  G  K  W  Q  W  L  P  Q  V  G  H  L  L  L  R  S  L  A  F  S  G  L  S  S  V  G  T  R  L  P  P  L  S  V  T  V  F  I  D  I  N  Q  L  T  V  Y  F  S  P  Q  A  V  I  N  L  Q  N  *  L  F  M  L  K  L  G  E  F  Y  L  P  K  P  K  E  M  K  *  Q  L  :  L  L  T  *  A  S  W  F  H  *  K  L  W  S  I  Q  T  R  F  *  E  R  R  I  R  G  L  T  I  L  T  L  I  *  R  S  *  L  M  K  C  S  I  L  C  T   : K  L  M  A  L  G  C  L  H  H  K  L  E  *  M  F  N  *  W  Y  L  M  Q  P  V  N  V  E  R  G  R  R  L  F  S  S  I  H  V  S  V  D  I  L  G  G  L  Y  L  M  K  K  V  A  Y  L  F  Q  *  Y  M  V  M  L  R :   D  Q  S  Q  L  R  L  T  H  R  T  L  M  V  Q  G  L  R  *  A  C  L  L  F  Q  H  E  S  S  N  M  N  L  I  T  Y  R :   E  F  F  S  L  T  K  *  L  T  K  S  W  T  P  F  V  K  N  *  W :   R  *  K  R  N  M  K  I  G  L  G  C  Q  P  L  K  A  *  I  H  E  K  *  R  R  L  L  L  D  L  A  N  H  E  F  T  G  I  Y  E  I  F  S   : V  F  V  *  *  S  T  K  W  D  C  Q  L  L  L  N  F  G  I  C  H  *  F  R  H  L  C  F  V  K  L  A  K  S  V  A  S  E  V  Y  P  C  T  D  T  A  L  F  R  N  D  R  V  T  T  E  I  C  M  E  K  E  L  L  S  T  F  D  Q  I  L  N  T  K  F  V  V  *  H  L  G  C  C  S  S  V  W  R  K  T  T  Q  E  K  F  H  K  F  P  S  </second_frame>
            <third_frame>   E  G  Q  N  *  *  Y  L  H  L  *  R  *  N  C  P  F  C  C  V  A  N  G  N  G  C  R  K  L  G  I  F  F  F  V  H  S  L  S  P  A  S  P  Q  S  E  L  V  S  L  P  Y  Q  L  Q  S  S  S  I  *  I  S  *  L  F  I  F  L  R  K  Q  *  *  T  S  K  I  S  C  L  C  S  S  *  A  S  F  I  F  Q  N  Q  R  R  *  N  S  N  S :   C  *  L  E  L  R  G  S  I  E  N  C  G  V  S  R  P  D  F  K  S  E  E  *  E  D  *  Q  F  *  R  *  F  E  E  V  S  *  *  N  V  R  Y  Y  V  Q  :  N  *  W  H  W  A  V  C  T  T  S  W  N  E  C  S  T  N  G  I  *  C  S  R  *  T  W  R  G  G  G  D  C  S  R  Q  S  T  C  Q  *  I  F  *  E  D  Y  T  L  *  R  R  L  L  I  F  S  N  D  T  W  *  C  *   : E  T  R  V  S  *  G  *  R  T  G  H  *  W  Y  K  V  *  D  K  L  V  C  S  S  S  T  S  L  P  T  *  I  *  S  P  T   : G  S  S  F  L  *  Q  N  D  *  R  S  P  G  H  H  S  *  K  I  S   : G  A  R  K  E  I  *  R  *  D  W  V  A  N  P  *  K  H  K  Y  T  K  N  K  E  G  C  C  W  I  W  Q  I  M  N  L  L  G  S  M  K  S  S  Q  :  Y  L  Y  D  E  A  Q  N  G  I  A  S  F  C  *  T  L  V  Y  A  I  N  L  D  T  C  A  L  *  N  *  P  K  V  W  P  L  R  F  I  L  V  L  I  L  L  C  L  G  M  I  G  L  P  Q  K  F  V  W  K  K  N  C  *  V  H  L  I  K  Y  *  T  P  S  L  S  F  N  T  W  V  V  V  V  Q  C  G  E  K  Q  L  K  R  S  S  I  S  S  P  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0123B22.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="132255" stop="132552"/>
                    <exon start="132647" stop="132785"/>
                    <exon start="133276" stop="133468"/>
                    <exon start="134505" stop="134615"/>
                    <exon start="135044" stop="135106"/>
                    <exon start="135196" stop="135297"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>903</number_coding_nucleotides>
                  <number_encoded_amino_acids>301</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TKDKISNICICRGEIVRFVVWQMAMAAASWASSSSFTRFLRPLLSRNSSPSPISYSLHRYKSANCLFFSASSNKPPKLAVYAQARRVLSSKTKGDEIATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANLKKLVDEMFDIMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPYEEGCLSFPMIHGDVKRPESVKVDAQDINGTRFEISLSALPARVFQHEFDHLQGVLFFDKMTDEVLDTIREKLVALEKKYEDRTGLPTPESINTRKIKKAAVGFGKS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="135059" e_stop="135106"/>
            <exon e_start="135196" e_stop="135704"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.537" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="135059" e_stop="135106" e_length="48"/>
          </exon>
          <intron i_serial="1" don_prob="0.537" acc_prob="0.999">
            <gDNA_intron_boundary i_start="135107" i_stop="135195" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="135196" e_stop="135704" e_length="509"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="135059" stop="135106"/>
              <exon start="135196" stop="135704"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U565238" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GACAAAATGACTGACGAAGTCCTGGACACCATTCGTGAAAAATTAGTG : GCGCTAGAAAAGAAATATGAAGATAGGACTGGGTTGCCAACCCCTGAAAGCATAAATACACGAAAAATAAAGAAGGCTGCTGTTGGATTTGGCAAATCATGAATTTACTGGGATCTATGAAATCTTCTCAGGTTTCTGATGCCTTACCTTTATTTCATTTGCTTATTGTTTTACTGCATGTGCTTTACACTTGCTACTTGATGTATGCAGTATTTGTATGATGAAGCACAAAATGGGATTGCCAGCTTTTGCTGAACTTTGGTATATGCCATTAATTTAGACACTTGTGCTTTGTGAAACTAGCCAAAAGTGTGGCCTCTGAGGTTTATCCTTGTACTGATACTGCTCTGTTTAGGAATGATAGGGTTACCACAGAAATTTGTATGGAAAAAGAACTGTTAAGTACATTTGATCAAATATTGAACACCAAGTTTGTCGTTTAACACTTGGGTTGTTGTAGTTCAGTGTGGAGAAAAACAACTCAAGAGAAGTTCCATAAGTTCCCCAGC</gDNA_template>
            <first_frame> D  K  M  T  D  E  V  L  D  T  I  R  E  K  L  V  :  A  L  E  K  K  Y  E  D  R  T  G  L  P  T  P  E  S  I  N  T  R  K  I  K  K  A  A  V  G  F  G  K  S  *  I  Y  W  D  L  *  N  L  L  R  F  L  M  P  Y  L  Y  F  I  C  L  L  F  Y  C  M  C  F  T  L  A  T  *  C  M  Q  Y  L  Y  D  E  A  Q  N  G  I  A  S  F  C  *  T  L  V  Y  A  I  N  L  D  T  C  A  L  *  N  *  P  K  V  W  P  L  R  F  I  L  V  L  I  L  L  C  L  G  M  I  G  L  P  Q  K  F  V  W  K  K  N  C  *  V  H  L  I  K  Y  *  T  P  S  L  S  F  N  T  W  V  V  V  V  Q  C  G  E  K  Q  L  K  R  S  S  I  S  S  P   </first_frame>
            <second_frame>  T  K  *  L  T  K  S  W  T  P  F  V  K  N  *  W :   R  *  K  R  N  M  K  I  G  L  G  C  Q  P  L  K  A  *  I  H  E  K  *  R  R  L  L  L  D  L  A  N  H  E  F  T  G  I  Y  E  I  F  S  G  F  *  C  L  T  F  I  S  F  A  Y  C  F  T  A  C  A  L  H  L  L  L  D  V  C  S  I  C  M  M  K  H  K  M  G  L  P  A  F  A  E  L  W  Y  M  P  L  I  *  T  L  V  L  C  E  T  S  Q  K  C  G  L  *  G  L  S  L  Y  *  Y  C  S  V  *  E  *  *  G  Y  H  R  N  L  Y  G  K  R  T  V  K  Y  I  *  S  N  I  E  H  Q  V  C  R  L  T  L  G  L  L  *  F  S  V  E  K  N  N  S  R  E  V  P  *  V  P  Q  </second_frame>
            <third_frame>   Q  N  D  *  R  S  P  G  H  H  S  *  K  I  S   : G  A  R  K  E  I  *  R  *  D  W  V  A  N  P  *  K  H  K  Y  T  K  N  K  E  G  C  C  W  I  W  Q  I  M  N  L  L  G  S  M  K  S  S  Q  V  S  D  A  L  P  L  F  H  L  L  I  V  L  L  H  V  L  Y  T  C  Y  L  M  Y  A  V  F  V  *  *  S  T  K  W  D  C  Q  L  L  L  N  F  G  I  C  H  *  F  R  H  L  C  F  V  K  L  A  K  S  V  A  S  E  V  Y  P  C  T  D  T  A  L  F  R  N  D  R  V  T  T  E  I  C  M  E  K  E  L  L  S  T  F  D  Q  I  L  N  T  K  F  V  V  *  H  L  G  C  C  S  S  V  W  R  K  T  T  Q  E  K  F  H  K  F  P  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLe0123B22.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="132278" e_stop="132552"/>
            <exon e_start="132647" e_stop="133147"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.947" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="132278" e_stop="132552" e_length="275"/>
          </exon>
          <intron i_serial="1" don_prob="0.947" acc_prob="0.996">
            <gDNA_intron_boundary i_start="132553" i_stop="132646" i_length="94"/>
          </intron>
          <exon e_serial="2" e_score="0.966">
            <gDNA_exon_boundary e_start="132647" e_stop="133147" e_length="501"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132278" stop="132552"/>
              <exon start="132647" stop="133147"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U596444" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGCATCTGTAGAGGTGAAATTGTCCGTTTTGTTGTGTGGCAAATGGCAATGGCTGCCGCAAGTTGGGCATCTTCTTCTTCGTTCACTCGCTTTCTCCGGCCTCTCCTCAGTCGGAACTCGTCTCCCTCCCCTATCAGTTACAGTCTTCATCGATATAAATCAGCTAACTGTTTATTTTTCTCCGCAAGCAGTAATAAACCTCCAAAATTAGCTGTTTATGCTCAAGCTAGGCGAGTTTTATCTTCCAAAACCAAAGGAGATGAAATAGCAACTC : CTGCTGACTTGAGCTTCGTGGTTCCATTGAAAATTGTGGAGTATCCAGACCCGATTTTAAGAGCGAAGAATAAGAGGATTGACAATTTTGACGCTAATTTGAAGAAGTTAGTTGATGAAATGTTCGATATTATGTACAAGTGAGTCCATCCGTTTCTTACAATCCATAACTACTTGTCCTTTTGAGTTTTCATAACTTATTTTAATGCAAAAATCAGTTGTTCAATCAGTAAACTGGATAACTCAATCTATTGGAGCTTCGCAAAGCATGACTGATCCCAAACCTAGATATAGGAAGAGATTATTCTTGGTGGAGGTCTAATTATGTTGAAAATAAAACAAAAATAGTTATGGCGACACAAATTTAGAATAATGGAATCCGACTAGTTTGGAATTGAGGTGTAACTGACTGATTTATTGAATTAAGAATAGATGGATTTTGACACAAATTTAGAATAGTGGAATCCGACTAGTTGGGAATTGAGGTGTAACTGACTGATTT</gDNA_template>
            <first_frame> L  H  L  *  R  *  N  C  P  F  C  C  V  A  N  G  N  G  C  R  K  L  G  I  F  F  F  V  H  S  L  S  P  A  S  P  Q  S  E  L  V  S  L  P  Y  Q  L  Q  S  S  S  I  *  I  S  *  L  F  I  F  L  R  K  Q  *  *  T  S  K  I  S  C  L  C  S  S  *  A  S  F  I  F  Q  N  Q  R  R  *  N  S  N  S :   C  *  L  E  L  R  G  S  I  E  N  C  G  V  S  R  P  D  F  K  S  E  E  *  E  D  *  Q  F  *  R  *  F  E  E  V  S  *  *  N  V  R  Y  Y  V  Q  V  S  P  S  V  S  Y  N  P  *  L  L  V  L  L  S  F  H  N  L  F  *  C  K  N  Q  L  F  N  Q  *  T  G  *  L  N  L  L  E  L  R  K  A  *  L  I  P  N  L  D  I  G  R  D  Y  S  W  W  R  S  N  Y  V  E  N  K  T  K  I  V  M  A  T  Q  I  *  N  N  G  I  R  L  V  W  N  *  G  V  T  D  *  F  I  E  L  R  I  D  G  F  *  H  K  F  R  I  V  E  S  D  *  L  G  I  E  V  *  L  T  D   </first_frame>
            <second_frame>  C  I  C  R  G  E  I  V  R  F  V  V  W  Q  M  A  M  A  A  A  S  W  A  S  S  S  S  F  T  R  F  L  R  P  L  L  S  R  N  S  S  P  S  P  I  S  Y  S  L  H  R  Y  K  S  A  N  C  L  F  F  S  A  S  S  N  K  P  P  K  L  A  V  Y  A  Q  A  R  R  V  L  S  S  K  T  K  G  D  E  I  A  T   : P  A  D  L  S  F  V  V  P  L  K  I  V  E  Y  P  D  P  I  L  R  A  K  N  K  R  I  D  N  F  D  A  N  L  K  K  L  V  D  E  M  F  D  I  M  Y  K  *  V  H  P  F  L  T  I  H  N  Y  L  S  F  *  V  F  I  T  Y  F  N  A  K  I  S  C  S  I  S  K  L  D  N  S  I  Y  W  S  F  A  K  H  D  *  S  Q  T  *  I  *  E  E  I  I  L  G  G  G  L  I  M  L  K  I  K  Q  K  *  L  W  R  H  K  F  R  I  M  E  S  D  *  F  G  I  E  V  *  L  T  D  L  L  N  *  E  *  M  D  F  D  T  N  L  E  *  W  N  P  T  S  W  E  L  R  C  N  *  L  I  </second_frame>
            <third_frame>   A  S  V  E  V  K  L  S  V  L  L  C  G  K  W  Q  W  L  P  Q  V  G  H  L  L  L  R  S  L  A  F  S  G  L  S  S  V  G  T  R  L  P  P  L  S  V  T  V  F  I  D  I  N  Q  L  T  V  Y  F  S  P  Q  A  V  I  N  L  Q  N  *  L  F  M  L  K  L  G  E  F  Y  L  P  K  P  K  E  M  K  *  Q  L  :  L  L  T  *  A  S  W  F  H  *  K  L  W  S  I  Q  T  R  F  *  E  R  R  I  R  G  L  T  I  L  T  L  I  *  R  S  *  L  M  K  C  S  I  L  C  T  S  E  S  I  R  F  L  Q  S  I  T  T  C  P  F  E  F  S  *  L  I  L  M  Q  K  S  V  V  Q  S  V  N  W  I  T  Q  S  I  G  A  S  Q  S  M  T  D  P  K  P  R  Y  R  K  R  L  F  L  V  E  V  *  L  C  *  K  *  N  K  N  S  Y  G  D  T  N  L  E  *  W  N  P  T  S  L  E  L  R  C  N  *  L  I  Y  *  I  K  N  R  W  I  L  T  Q  I  *  N  S  G  I  R  L  V  G  N  *  G  V  T  D  *  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0123B22.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="132279" stop="132552"/>
                    <exon start="132647" stop="132789"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>414</number_coding_nucleotides>
                  <number_encoded_amino_acids>138</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CICRGEIVRFVVWQMAMAAASWASSSSFTRFLRPLLSRNSSPSPISYSLHRYKSANCLFFSASSNKPPKLAVYAQARRVLSSKTKGDEIATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANLKKLVDEMFDIMYK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="136769" PGL_stop="143943"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="136769" e_stop="136939"/>
            <exon e_start="137658" e_stop="137858"/>
            <exon e_start="137947" e_stop="138039"/>
            <exon e_start="140204" e_stop="140263"/>
            <exon e_start="140364" e_stop="140636"/>
            <exon e_start="141641" e_stop="141712"/>
            <exon e_start="141785" e_stop="141841"/>
            <exon e_start="142556" e_stop="142696"/>
            <exon e_start="142795" e_stop="142845"/>
            <exon e_start="142918" e_stop="143013"/>
            <exon e_start="143119" e_stop="143202"/>
            <exon e_start="143389" e_stop="143491"/>
            <exon e_start="143596" e_stop="143943"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.936" e_score="0.988"/>
          <exon-intron don_prob="0.867" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.927" acc_prob="0.874" e_score="1.000"/>
          <exon-intron don_prob="0.792" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.823" acc_prob="0.947" e_score="1.000"/>
          <exon-intron don_prob="0.785" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.941" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.591" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="136769" e_stop="136939" e_length="171"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.936">
            <gDNA_intron_boundary i_start="136940" i_stop="137657" i_length="718"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="137658" e_stop="137858" e_length="201"/>
          </exon>
          <intron i_serial="2" don_prob="0.867" acc_prob="1.000">
            <gDNA_intron_boundary i_start="137859" i_stop="137946" i_length="88"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="137947" e_stop="138039" e_length="93"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="138040" i_stop="140203" i_length="2164"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="140204" e_stop="140263" e_length="60"/>
          </exon>
          <intron i_serial="4" don_prob="0.927" acc_prob="0.874">
            <gDNA_intron_boundary i_start="140264" i_stop="140363" i_length="100"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="140364" e_stop="140636" e_length="273"/>
          </exon>
          <intron i_serial="5" don_prob="0.792" acc_prob="0.985">
            <gDNA_intron_boundary i_start="140637" i_stop="141640" i_length="1004"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="141641" e_stop="141712" e_length="72"/>
          </exon>
          <intron i_serial="6" don_prob="0.989" acc_prob="0.998">
            <gDNA_intron_boundary i_start="141713" i_stop="141784" i_length="72"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="141785" e_stop="141841" e_length="57"/>
          </exon>
          <intron i_serial="7" don_prob="0.823" acc_prob="0.947">
            <gDNA_intron_boundary i_start="141842" i_stop="142555" i_length="714"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="142556" e_stop="142696" e_length="141"/>
          </exon>
          <intron i_serial="8" don_prob="0.785" acc_prob="0.991">
            <gDNA_intron_boundary i_start="142697" i_stop="142794" i_length="98"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="142795" e_stop="142845" e_length="51"/>
          </exon>
          <intron i_serial="9" don_prob="0.999" acc_prob="0.941">
            <gDNA_intron_boundary i_start="142846" i_stop="142917" i_length="72"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="142918" e_stop="143013" e_length="96"/>
          </exon>
          <intron i_serial="10" don_prob="0.994" acc_prob="0.591">
            <gDNA_intron_boundary i_start="143014" i_stop="143118" i_length="105"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="143119" e_stop="143202" e_length="84"/>
          </exon>
          <intron i_serial="11" don_prob="0.977" acc_prob="1.000">
            <gDNA_intron_boundary i_start="143203" i_stop="143388" i_length="186"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="143389" e_stop="143491" e_length="103"/>
          </exon>
          <intron i_serial="12" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="143492" i_stop="143595" i_length="104"/>
          </intron>
          <exon e_serial="13" e_score="0.997">
            <gDNA_exon_boundary e_start="143596" e_stop="143943" e_length="348"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136769" stop="136939"/>
              <exon start="137658" stop="137858"/>
              <exon start="137947" stop="138039"/>
              <exon start="140204" stop="140263"/>
              <exon start="140364" stop="140636"/>
              <exon start="141641" stop="141712"/>
              <exon start="141785" stop="141841"/>
              <exon start="142556" stop="142696"/>
              <exon start="142795" stop="142845"/>
              <exon start="142918" stop="143013"/>
              <exon start="143119" stop="143202"/>
              <exon start="143389" stop="143491"/>
              <exon start="143596" stop="143943"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U581960" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAGTGAGAAAAATGAAAGAAGAGCAGCATTGCAGAAGTCTATAGCCAAGAACCTGAAAACTTGGCCATACGCCATTTTCACTTCCACTTTATTTCTTCCGCGCTTAGGGTTTTGCTGTTTCACTCACAATTTTCCATCGCCAATGCGAGCAATTCACTTCACCGCTGCAG : GTTTTGAGAAGCAGACAATCTGTCACTTGAGTCATAACCATTTATCAGTACTATAAGGAAGTTTATTTGTTATTCAGTGACATGGCTTCGGGCAGTATTATGTCTTCAGCAGCTGGCAAACCTATTACTGATGTTGTGCTTATTGACAACCTACCTAAAGAAATAAATGCAATGAAGATCAACGATGACAAAGAAGGAAAG : GAAATGGAAGCCGCTGTTGTGGATGGGAATGGAACTGAAACAGGTCACATCATTGTGACGACTATTGGGGGGAAAAATGGTCAGCCAAAGCAG : ACCATAAGTTACATGGCGGAGCGTGTAGTTGGACAGGGTTCCTTTGGAATTGTGTTCCAG : GCCAAATGCCTTGAAACAGGAGAAACCGTGGCAATAAAAAAGGTCTTGCAGGACAAGAGATACAAGAATCGGGAATTGCAGACTATGCGACTTCTTGATCATCCTAGTATTGTTTCACTGAAGCACTGCTTCTTTTCGACCACAGAAAAGGATGAGCTTTATCTAAATTTGGTTCTAGAATTTGTACCTGAAACTCTCTACCGTGTGTTAAGACATTACAGCAAAGCAAACCAACGGATGCCTATTATATATGTCAAACTGTACACATATCAG : ATATTTAGAGCTTTGGCTTACATACATGGGATAGGAGTCTGCCACAGGGACATCAAACCTCAGAATTTACTG : GTCAACCCCCACACACATCAGCTTAAGCTTTGTGATTTTGGGAGTGCAAAAGTCCTG : GTCAAAGGCGAGCCAAACATTTCATATATCTGTTCACGTTATTATCGTGCGCCCGAACTAATATTCGGAGCAACTGAGTACACCAATGCAATTGACATTTGGTCTGTGGGTTGTGTCCTAGCTGAACTGCTTCTTGGACAG : CCCCTCTTTCCTGGTGAGAGTGGTGTAGATCAGCTCGTCGAAATAATCAAG : GTTCTTGGAACACCAACTCGTGAAGAAATCAAGTGTATGAATCCAAATTACACCGAATTTAAGTTCCCGCAAATCAAAGCTCACCCCTGGCACAAG : ATTTTTCACAAGCGGATGCCTCCTGAAGCTGTAGATCTTGTGATAAGGCTTCTACAGTATTCTCCAAATCTGAGGTGCACAGCG : TTGGAAGCTCTTGGTCACGCTTTCTTTGATGAGCTCCGTGACCCTAATGCTCGTCCTCCTAATGGTCGTCCATTGCCATCTCTCTTCAACTTCAGACCTCAAG : AGCTGAAAGGAGCGTCTTCAGAACTCTTAAACAAACTGTTACCAGAACATGCTAAAAAGCAGTGTCCCTTACTTGGAGTCTAGTCTGTAAGAATTTGTTTATCTTTTGTGAACTTGATCCTATTTATTATCACTGTTCAGAGAATTAGGAAAACCTTTTGACATCTCCATTAGTCTATTATATACCACTTCTTCGCCAATTATGTAATCAGCTGATTCCCCCCGTACTCTACTTAATTATTTGTAAATAGTAATGTATTACGGGATTTACCTTATTCCTTATCGACAATTTTATTTTTGTATGCACATCTTAGTTTGCATTTTTTACTGCATTTTGGTCGATTCTATT</gDNA_template>
            <first_frame> K  V  R  K  M  K  E  E  Q  H  C  R  S  L  *  P  R  T  *  K  L  G  H  T  P  F  S  L  P  L  Y  F  F  R  A  *  G  F  A  V  S  L  T  I  F  H  R  Q  C  E  Q  F  T  S  P  L  Q  :  V  L  R  S  R  Q  S  V  T  *  V  I  T  I  Y  Q  Y  Y  K  E  V  Y  L  L  F  S  D  M  A  S  G  S  I  M  S  S  A  A  G  K  P  I  T  D  V  V  L  I  D  N  L  P  K  E  I  N  A  M  K  I  N  D  D  K  E  G  K  :  E  M  E  A  A  V  V  D  G  N  G  T  E  T  G  H  I  I  V  T  T  I  G  G  K  N  G  Q  P  K  Q  :  T  I  S  Y  M  A  E  R  V  V  G  Q  G  S  F  G  I  V  F  Q  :  A  K  C  L  E  T  G  E  T  V  A  I  K  K  V  L  Q  D  K  R  Y  K  N  R  E  L  Q  T  M  R  L  L  D  H  P  S  I  V  S  L  K  H  C  F  F  S  T  T  E  K  D  E  L  Y  L  N  L  V  L  E  F  V  P  E  T  L  Y  R  V  L  R  H  Y  S  K  A  N  Q  R  M  P  I  I  Y  V  K  L  Y  T  Y  Q  :  I  F  R  A  L  A  Y  I  H  G  I  G  V  C  H  R  D  I  K  P  Q  N  L  L  :  V  N  P  H  T  H  Q  L  K  L  C  D  F  G  S  A  K  V  L  :  V  K  G  E  P  N  I  S  Y  I  C  S  R  Y  Y  R  A  P  E  L  I  F  G  A  T  E  Y  T  N  A  I  D  I  W  S  V  G  C  V  L  A  E  L  L  L  G  Q  :  P  L  F  P  G  E  S  G  V  D  Q  L  V  E  I  I  K  :  V  L  G  T  P  T  R  E  E  I  K  C  M  N  P  N  Y  T  E  F  K  F  P  Q  I  K  A  H  P  W  H  K  :  I  F  H  K  R  M  P  P  E  A  V  D  L  V  I  R  L  L  Q  Y  S  P  N  L  R  C  T  A  :  L  E  A  L  G  H  A  F  F  D  E  L  R  D  P  N  A  R  P  P  N  G  R  P  L  P  S  L  F  N  F  R  P  Q   : E  L  K  G  A  S  S  E  L  L  N  K  L  L  P  E  H  A  K  K  Q  C  P  L  L  G  V  *  S  V  R  I  C  L  S  F  V  N  L  I  L  F  I  I  T  V  Q  R  I  R  K  T  F  *  H  L  H  *  S  I  I  Y  H  F  F  A  N  Y  V  I  S  *  F  P  P  Y  S  T  *  L  F  V  N  S  N  V  L  R  D  L  P  Y  S  L  S  T  I  L  F  L  Y  A  H  L  S  L  H  F  L  L  H  F  G  R  F  Y  </first_frame>
            <second_frame>  K  *  E  K  *  K  K  S  S  I  A  E  V  Y  S  Q  E  P  E  N  L  A  I  R  H  F  H  F  H  F  I  S  S  A  L  R  V  L  L  F  H  S  Q  F  S  I  A  N  A  S  N  S  L  H  R  C  R :   F  *  E  A  D  N  L  S  L  E  S  *  P  F  I  S  T  I  R  K  F  I  C  Y  S  V  T  W  L  R  A  V  L  C  L  Q  Q  L  A  N  L  L  L  M  L  C  L  L  T  T  Y  L  K  K  *  M  Q  *  R  S  T  M  T  K  K  E  R :   K  W  K  P  L  L  W  M  G  M  E  L  K  Q  V  T  S  L  *  R  L  L  G  G  K  M  V  S  Q  S  R :   P  *  V  T  W  R  S  V  *  L  D  R  V  P  L  E  L  C  S  R :   P  N  A  L  K  Q  E  K  P  W  Q  *  K  R  S  C  R  T  R  D  T  R  I  G  N  C  R  L  C  D  F  L  I  I  L  V  L  F  H  *  S  T  A  S  F  R  P  Q  K  R  M  S  F  I  *  I  W  F  *  N  L  Y  L  K  L  S  T  V  C  *  D  I  T  A  K  Q  T  N  G  C  L  L  Y  M  S  N  C  T  H  I  R :   Y  L  E  L  W  L  T  Y  M  G  *  E  S  A  T  G  T  S  N  L  R  I  Y  W :   S  T  P  T  H  I  S  L  S  F  V  I  L  G  V  Q  K  S  W :   S  K  A  S  Q  T  F  H  I  S  V  H  V  I  I  V  R  P  N  *  Y  S  E  Q  L  S  T  P  M  Q  L  T  F  G  L  W  V  V  S  *  L  N  C  F  L  D  S :   P  S  F  L  V  R  V  V  *  I  S  S  S  K  *  S  R :   F  L  E  H  Q  L  V  K  K  S  S  V  *  I  Q  I  T  P  N  L  S  S  R  K  S  K  L  T  P  G  T  R :   F  F  T  S  G  C  L  L  K  L  *  I  L  *  *  G  F  Y  S  I  L  Q  I  *  G  A  Q  R :   W  K  L  L  V  T  L  S  L  M  S  S  V  T  L  M  L  V  L  L  M  V  V  H  C  H  L  S  S  T  S  D  L  K  :  S  *  K  E  R  L  Q  N  S  *  T  N  C  Y  Q  N  M  L  K  S  S  V  P  Y  L  E  S  S  L  *  E  F  V  Y  L  L  *  T  *  S  Y  L  L  S  L  F  R  E  L  G  K  P  F  D  I  S  I  S  L  L  Y  T  T  S  S  P  I  M  *  S  A  D  S  P  R  T  L  L  N  Y  L  *  I  V  M  Y  Y  G  I  Y  L  I  P  Y  R  Q  F  Y  F  C  M  H  I  L  V  C  I  F  Y  C  I  L  V  D  S  I </second_frame>
            <third_frame>   S  E  K  N  E  R  R  A  A  L  Q  K  S  I  A  K  N  L  K  T  W  P  Y  A  I  F  T  S  T  L  F  L  P  R  L  G  F  C  C  F  T  H  N  F  P  S  P  M  R  A  I  H  F  T  A  A   : G  F  E  K  Q  T  I  C  H  L  S  H  N  H  L  S  V  L  *  G  S  L  F  V  I  Q  *  H  G  F  G  Q  Y  Y  V  F  S  S  W  Q  T  Y  Y  *  C  C  A  Y  *  Q  P  T  *  R  N  K  C  N  E  D  Q  R  *  Q  R  R  K   : G  N  G  S  R  C  C  G  W  E  W  N  *  N  R  S  H  H  C  D  D  Y  W  G  E  K  W  S  A  K  A   : D  H  K  L  H  G  G  A  C  S  W  T  G  F  L  W  N  C  V  P   : G  Q  M  P  *  N  R  R  N  R  G  N  K  K  G  L  A  G  Q  E  I  Q  E  S  G  I  A  D  Y  A  T  S  *  S  S  *  Y  C  F  T  E  A  L  L  L  F  D  H  R  K  G  *  A  L  S  K  F  G  S  R  I  C  T  *  N  S  L  P  C  V  K  T  L  Q  Q  S  K  P  T  D  A  Y  Y  I  C  Q  T  V  H  I  S   : D  I  *  S  F  G  L  H  T  W  D  R  S  L  P  Q  G  H  Q  T  S  E  F  T   : G  Q  P  P  H  T  S  A  *  A  L  *  F  W  E  C  K  S  P   : G  Q  R  R  A  K  H  F  I  Y  L  F  T  L  L  S  C  A  R  T  N  I  R  S  N  *  V  H  Q  C  N  *  H  L  V  C  G  L  C  P  S  *  T  A  S  W  T   : A  P  L  S  W  *  E  W  C  R  S  A  R  R  N  N  Q   : G  S  W  N  T  N  S  *  R  N  Q  V  Y  E  S  K  L  H  R  I  *  V  P  A  N  Q  S  S  P  L  A  Q   : D  F  S  Q  A  D  A  S  *  S  C  R  S  C  D  K  A  S  T  V  F  S  K  S  E  V  H  S   : V  G  S  S  W  S  R  F  L  *  *  A  P  *  P  *  C  S  S  S  *  W  S  S  I  A  I  S  L  Q  L  Q  T  S  R :   A  E  R  S  V  F  R  T  L  K  Q  T  V  T  R  T  C  *  K  A  V  S  L  T  W  S  L  V  C  K  N  L  F  I  F  C  E  L  D  P  I  Y  Y  H  C  S  E  N  *  E  N  L  L  T  S  P  L  V  Y  Y  I  P  L  L  R  Q  L  C  N  Q  L  I  P  P  V  L  Y  L  I  I  C  K  *  *  C  I  T  G  F  T  L  F  L  I  D  N  F  I  F  V  C  T  S  *  F  A  F  F  T  A  F  W  S  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0123B22.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="137688" stop="137858"/>
                    <exon start="137947" stop="138039"/>
                    <exon start="140204" stop="140263"/>
                    <exon start="140364" stop="140636"/>
                    <exon start="141641" stop="141712"/>
                    <exon start="141785" stop="141841"/>
                    <exon start="142556" stop="142696"/>
                    <exon start="142795" stop="142845"/>
                    <exon start="142918" stop="143013"/>
                    <exon start="143119" stop="143202"/>
                    <exon start="143389" stop="143491"/>
                    <exon start="143596" stop="143678"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1281</number_coding_nucleotides>
                  <number_encoded_amino_acids>427</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VITIYQYYKEVYLLFSDMASGSIMSSAAGKPITDVVLIDNLPKEINAMKINDDKEGKEMEAAVVDGNGTETGHIIVTTIGGKNGQPKQTISYMAERVVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPSIVSLKHCFFSTTEKDELYLNLVLEFVPETLYRVLRHYSKANQRMPIIYVKLYTYQIFRALAYIHGIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTNAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVIRLLQYSPNLRCTALEALGHAFFDELRDPNARPPNGRPLPSLFNFRPQELKGASSELLNKLLPEHAKKQCPLLGV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0123B22.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="136771" stop="136939"/>
                    <exon start="137658" stop="137713"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SEKNERRAALQKSIAKNLKTWPYAIFTSTLFLPRLGFCCFTHNFPSPMRAIHFTAAGFEKQTICHLSHNHLSVL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="146984" PGL_stop="157084"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="146984" e_stop="147146"/>
            <exon e_start="150685" e_stop="151018"/>
            <exon e_start="151993" e_stop="152115"/>
            <exon e_start="152802" e_stop="152870"/>
            <exon e_start="153384" e_stop="153653"/>
            <exon e_start="154325" e_stop="154675"/>
            <exon e_start="154872" e_stop="155149"/>
            <exon e_start="156030" e_stop="156404"/>
            <exon e_start="156488" e_stop="157084"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.912" acc_prob="0.947" e_score="0.988"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.866" acc_prob="0.950" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="146984" e_stop="147146" e_length="163"/>
          </exon>
          <intron i_serial="1" don_prob="0.912" acc_prob="0.947">
            <gDNA_intron_boundary i_start="147147" i_stop="150684" i_length="3538"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="150685" e_stop="151018" e_length="334"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="151019" i_stop="151992" i_length="974"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="151993" e_stop="152115" e_length="123"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="152116" i_stop="152801" i_length="686"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="152802" e_stop="152870" e_length="69"/>
          </exon>
          <intron i_serial="4" don_prob="0.983" acc_prob="0.967">
            <gDNA_intron_boundary i_start="152871" i_stop="153383" i_length="513"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="153384" e_stop="153653" e_length="270"/>
          </exon>
          <intron i_serial="5" don_prob="0.866" acc_prob="0.950">
            <gDNA_intron_boundary i_start="153654" i_stop="154324" i_length="671"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="154325" e_stop="154675" e_length="351"/>
          </exon>
          <intron i_serial="6" don_prob="0.996" acc_prob="0.975">
            <gDNA_intron_boundary i_start="154676" i_stop="154871" i_length="196"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="154872" e_stop="155149" e_length="278"/>
          </exon>
          <intron i_serial="7" don_prob="0.986" acc_prob="0.998">
            <gDNA_intron_boundary i_start="155150" i_stop="156029" i_length="880"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="156030" e_stop="156404" e_length="375"/>
          </exon>
          <intron i_serial="8" don_prob="0.991" acc_prob="0.998">
            <gDNA_intron_boundary i_start="156405" i_stop="156487" i_length="83"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="156488" e_stop="157084" e_length="597"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146984" stop="147146"/>
              <exon start="150685" stop="151018"/>
              <exon start="151993" stop="152115"/>
              <exon start="152802" stop="152870"/>
              <exon start="153384" stop="153653"/>
              <exon start="154325" stop="154675"/>
              <exon start="154872" stop="155149"/>
              <exon start="156030" stop="156404"/>
              <exon start="156488" stop="157084"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U562803" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGTTTCTCTCTGCTTCTCCGCTGCTTCACTCATACCTTTGTATACTTTTATATATAAATTATTTAGCAGAGTGAGTGGGAGGGAGAACGGACGGGAGACATCGTCGGAGGTGGGAATCGTTTGTATCAGCTTCTTTTATCGTCATCGGAAAGACTTTGTCAG : AGGTAATTGGATACTGAAGCTTGAGATGGCTGCTACTGCAACTGCATCTTCTACTGGTCCACGTTATGCACCAGAGGATCCCACCCTTCCCAAACCTTGGAAAGGCCTAGTTGATGGTAAGACTGGATATCTCTATTTTTGGAATCCAGAGACCAATACTACCCAATACGAGAAGCCTGTTGCTACTCCTCATGTGGGTGCTGCACAACATAAATCCTCTGTATCTGTAAGTTCATCAGTTGAGAGGCCTTCTCAAAGTCAATGTTCTGACCATGGTGACAACAGAGGTACCAATGGTGCCTTGAGCAAACTTTCCTCTGGAGAGGGTATTCAG : ACTGCAAGAGCAAATGAGCTTTCCCGCGATGAAACATCTGCGCCTAAAGGTTATAGTGCTTCAGCTGCCGCGAGTGACATATCTCCAGATGCCTATCGCCGTCAGCATGAAATTTCTGTCTCA : GGAGGTGATGTGCCCCCACCTTTCACATCGTTTGAAGCTACTGGGTTTCCTTCAGAGATTTTGAGGGAG : ATACATCAAGCTGGGTTTCCTGCTCCTTCCCCAATACAGGCACAGTCCTGGCCCATTGCACTTCAGGGCCGTGACATAGTAGCTGTTGCAAAGACTGGGTCTGGAAAAACTCTAGGTTTCTTGCTTCCTGGCTTTATTCTTCTAAAGCAACGTCGGAGTAATCCTCAATCAGGCCCTACTATTTTGGTTCTCTCGCCAACAAGAGAATTAGCCACACAGATACAAGATGAAGCTGTGAAGTTTGGTAGATCTTCAAAGATTTCTTGCACG : TGTTTATATGGAGGCGCCCCAAAAGGCCCTCAGCTACGAGATCTGGATAGGGGAGTTGATATTGTTGTTGCTACCCCTGGTCGATTGAATGATATTTTGGAGATGAGAAGAGTTAGGCTGGATCAAGTTTCTTACTTGGTGTTAGATGAAGCGGATCGTATGCTGGACATGGGATTCGAACCTCAGATAAGGAAGATTGTGAAGGAGGTGCCTACGCGACGGCAGACACTGATGTACACAGCAACATGGCCTAAGGAGGTCCGTAGAATTGCAGCTGATCTATTGGTTAATCCAGTTCAGGTTAACATTGGGAATGTTGATGAGCTTGTTGCGAACAAGTCTATTACACAG : TACATTGAAGTCTTGTCATATATGGATAAACAAAAGCGTCTAGACCAGATCTTGAGATCCCAAGAGCCTGGATCAAAAATCATTATCTTCTGTTCAACTAAGAAAATGTGTGACCAACTTGCTCGCAATCTTACACACCCATTTGGAGCTGCTGCTATTCATGGTGATAAATCTCAGGGTGAGAGGGATCATGTACTGAGCCAGTTCCGCACTGGCAAGTCCCCCGTTCTTGTTGCAACTGATGTTGCTGCTCGGGGCTTGGATGTCAAAGATATCAG : GGTGGTGGTCAACTATGATTTTCCAACTGGTATAGAGGACTATGTCCACAGAATAGGAAGAACTGGTCGGGCTGGTGCGACTGGTGAGGCCTACACATTTTTTGTTGACCAGGATGCTAAACATGCTTCAGATCTTATTAAAGTTTTAGAAGGAGCAAATCAGCAAGTGCCTACTGAACTACGTGATATGGCTTCTCGAGGAGGTGGTATGGGGAGGGCTAGGCGTCAATGGGATTCTGGCTCAGGTGGACGGGAAGGAGGACATGGGGGACGTTATGATGCTGGCTACGGTGGACGAGATGGAGCAAGGGGTGGTTGGGAAGCCCCTTCATCAGAAAGAAGTGGACGTGTTTATGACTCGGATTCACGTGACAG : AGATAGACATGGTCATGGCTCTGATGCTCCAGCTAGTTTCCATGGTCGAAGCTTCCATGAAACTATGATGCAGGGTTCACAGAGACGTGATAGAAGTAGGAGCAGAAGCCCTAATAGAGGTTCTGGATGGGGTGACAGAAAAGGCAGGGAGCGAAGTCGTAGCCGTAGTGCTGAAAGATCTGAGCGGACTCGTATTCAAGTTCCAGTAGGTGGCAGTTTCCATGAAGCCATGATGGGCTTCACTAGATCATCAGCTGGTGATTCCCGAAAGGACTGGGAAAAAGAAAGATCCCAAGGTGATGGGAAATCTGGCGATGGACCCCGTGCTAACAATTGGGAGGAGTAAGAAGGTAAAGGAGAGCCTGTGTTGATTTTTGATGTGTTGTAGGAAATGCTGGAAGAAAAAGGGGTCATTTTTGTTAAACTTTAACCACTACATGTTTTGGCAAACAGTGTTCTCGGATAGAAGAAGCTTTTAGCGTATTACTGGAAATAGATAGCTGAAAATCTGCAAATGGGAAGTTTTTGACGGATGTAAATGTAAAGTATTTTACCGTCAAACTTTGTTTAATGGAATCAGCCCACTTCTAAGTGTTG</gDNA_template>
            <first_frame> R  F  L  S  A  S  P  L  L  H  S  Y  L  C  I  L  L  Y  I  N  Y  L  A  E  *  V  G  G  R  T  D  G  R  H  R  R  R  W  E  S  F  V  S  A  S  F  I  V  I  G  K  T  L  S   : E  V  I  G  Y  *  S  L  R  W  L  L  L  Q  L  H  L  L  L  V  H  V  M  H  Q  R  I  P  P  F  P  N  L  G  K  A  *  L  M  V  R  L  D  I  S  I  F  G  I  Q  R  P  I  L  P  N  T  R  S  L  L  L  L  L  M  W  V  L  H  N  I  N  P  L  Y  L  *  V  H  Q  L  R  G  L  L  K  V  N  V  L  T  M  V  T  T  E  V  P  M  V  P  *  A  N  F  P  L  E  R  V  F  R :   L  Q  E  Q  M  S  F  P  A  M  K  H  L  R  L  K  V  I  V  L  Q  L  P  R  V  T  Y  L  Q  M  P  I  A  V  S  M  K  F  L  S  Q :   E  V  M  C  P  H  L  S  H  R  L  K  L  L  G  F  L  Q  R  F  *  G  R :   Y  I  K  L  G  F  L  L  L  P  Q  Y  R  H  S  P  G  P  L  H  F  R  A  V  T  *  *  L  L  Q  R  L  G  L  E  K  L  *  V  S  C  F  L  A  L  F  F  *  S  N  V  G  V  I  L  N  Q  A  L  L  F  W  F  S  R  Q  Q  E  N  *  P  H  R  Y  K  M  K  L  *  S  L  V  D  L  Q  R  F  L  A  R :   V  Y  M  E  A  P  Q  K  A  L  S  Y  E  I  W  I  G  E  L  I  L  L  L  L  P  L  V  D  *  M  I  F  W  R  *  E  E  L  G  W  I  K  F  L  T  W  C  *  M  K  R  I  V  C  W  T  W  D  S  N  L  R  *  G  R  L  *  R  R  C  L  R  D  G  R  H  *  C  T  Q  Q  H  G  L  R  R  S  V  E  L  Q  L  I  Y  W  L  I  Q  F  R  L  T  L  G  M  L  M  S  L  L  R  T  S  L  L  H  S :   T  L  K  S  C  H  I  W  I  N  K  S  V  *  T  R  S  *  D  P  K  S  L  D  Q  K  S  L  S  S  V  Q  L  R  K  C  V  T  N  L  L  A  I  L  H  T  H  L  E  L  L  L  F  M  V  I  N  L  R  V  R  G  I  M  Y  *  A  S  S  A  L  A  S  P  P  F  L  L  Q  L  M  L  L  L  G  A  W  M  S  K  I  S   : G  W  W  S  T  M  I  F  Q  L  V  *  R  T  M  S  T  E  *  E  E  L  V  G  L  V  R  L  V  R  P  T  H  F  L  L  T  R  M  L  N  M  L  Q  I  L  L  K  F  *  K  E  Q  I  S  K  C  L  L  N  Y  V  I  W  L  L  E  E  V  V  W  G  G  L  G  V  N  G  I  L  A  Q  V  D  G  K  E  D  M  G  D  V  M  M  L  A  T  V  D  E  M  E  Q  G  V  V  G  K  P  L  H  Q  K  E  V  D  V  F  M  T  R  I  H  V  T   : E  I  D  M  V  M  A  L  M  L  Q  L  V  S  M  V  E  A  S  M  K  L  *  C  R  V  H  R  D  V  I  E  V  G  A  E  A  L  I  E  V  L  D  G  V  T  E  K  A  G  S  E  V  V  A  V  V  L  K  D  L  S  G  L  V  F  K  F  Q  *  V  A  V  S  M  K  P  *  W  A  S  L  D  H  Q  L  V  I  P  E  R  T  G  K  K  K  D  P  K  V  M  G  N  L  A  M  D  P  V  L  T  I  G  R  S  K  K  V  K  E  S  L  C  *  F  L  M  C  C  R  K  C  W  K  K  K  G  S  F  L  L  N  F  N  H  Y  M  F  W  Q  T  V  F  S  D  R  R  S  F  *  R  I  T  G  N  R  *  L  K  I  C  K  W  E  V  F  D  G  C  K  C  K  V  F  Y  R  Q  T  L  F  N  G  I  S  P  L  L  S  V  </first_frame>
            <second_frame>  G  F  S  L  L  L  R  C  F  T  H  T  F  V  Y  F  Y  I  *  I  I  *  Q  S  E  W  E  G  E  R  T  G  D  I  V  G  G  G  N  R  L  Y  Q  L  L  L  S  S  S  E  R  L  C  Q  :  R  *  L  D  T  E  A  *  D  G  C  Y  C  N  C  I  F  Y  W  S  T  L  C  T  R  G  S  H  P  S  Q  T  L  E  R  P  S  *  W  *  D  W  I  S  L  F  L  E  S  R  D  Q  Y  Y  P  I  R  E  A  C  C  Y  S  S  C  G  C  C  T  T  *  I  L  C  I  C  K  F  I  S  *  E  A  F  S  K  S  M  F  *  P  W  *  Q  Q  R  Y  Q  W  C  L  E  Q  T  F  L  W  R  G  Y  S   : D  C  K  S  K  *  A  F  P  R  *  N  I  C  A  *  R  L  *  C  F  S  C  R  E  *  H  I  S  R  C  L  S  P  S  A  *  N  F  C  L   : R  R  *  C  A  P  T  F  H  I  V  *  S  Y  W  V  S  F  R  D  F  E  G   : D  T  S  S  W  V  S  C  S  F  P  N  T  G  T  V  L  A  H  C  T  S  G  P  *  H  S  S  C  C  K  D  W  V  W  K  N  S  R  F  L  A  S  W  L  Y  S  S  K  A  T  S  E  *  S  S  I  R  P  Y  Y  F  G  S  L  A  N  K  R  I  S  H  T  D  T  R  *  S  C  E  V  W  *  I  F  K  D  F  L  H   : V  F  I  W  R  R  P  K  R  P  S  A  T  R  S  G  *  G  S  *  Y  C  C  C  Y  P  W  S  I  E  *  Y  F  G  D  E  K  S  *  A  G  S  S  F  L  L  G  V  R  *  S  G  S  Y  A  G  H  G  I  R  T  S  D  K  E  D  C  E  G  G  A  Y  A  T  A  D  T  D  V  H  S  N  M  A  *  G  G  P  *  N  C  S  *  S  I  G  *  S  S  S  G  *  H  W  E  C  *  *  A  C  C  E  Q  V  Y  Y  T   : V  H  *  S  L  V  I  Y  G  *  T  K  A  S  R  P  D  L  E  I  P  R  A  W  I  K  N  H  Y  L  L  F  N  *  E  N  V  *  P  T  C  S  Q  S  Y  T  P  I  W  S  C  C  Y  S  W  *  *  I  S  G  *  E  G  S  C  T  E  P  V  P  H  W  Q  V  P  R  S  C  C  N  *  C  C  C  S  G  L  G  C  Q  R  Y  Q  :  G  G  G  Q  L  *  F  S  N  W  Y  R  G  L  C  P  Q  N  R  K  N  W  S  G  W  C  D  W  *  G  L  H  I  F  C  *  P  G  C  *  T  C  F  R  S  Y  *  S  F  R  R  S  K  S  A  S  A  Y  *  T  T  *  Y  G  F  S  R  R  W  Y  G  E  G  *  A  S  M  G  F  W  L  R  W  T  G  R  R  T  W  G  T  L  *  C  W  L  R  W  T  R  W  S  K  G  W  L  G  S  P  F  I  R  K  K  W  T  C  L  *  L  G  F  T  *  Q  :  R  *  T  W  S  W  L  *  C  S  S  *  F  P  W  S  K  L  P  *  N  Y  D  A  G  F  T  E  T  *  *  K  *  E  Q  K  P  *  *  R  F  W  M  G  *  Q  K  R  Q  G  A  K  S  *  P  *  C  *  K  I  *  A  D  S  Y  S  S  S  S  R  W  Q  F  P  *  S  H  D  G  L  H  *  I  I  S  W  *  F  P  K  G  L  G  K  R  K  I  P  R  *  W  E  I  W  R  W  T  P  C  *  Q  L  G  G  V  R  R  *  R  R  A  C  V  D  F  *  C  V  V  G  N  A  G  R  K  R  G  H  F  C  *  T  L  T  T  T  C  F  G  K  Q  C  S  R  I  E  E  A  F  S  V  L  L  E  I  D  S  *  K  S  A  N  G  K  F  L  T  D  V  N  V  K  Y  F  T  V  K  L  C  L  M  E  S  A  H  F  *  V  L </second_frame>
            <third_frame>   V  S  L  C  F  S  A  A  S  L  I  P  L  Y  T  F  I  Y  K  L  F  S  R  V  S  G  R  E  N  G  R  E  T  S  S  E  V  G  I  V  C  I  S  F  F  Y  R  H  R  K  D  F  V  R :   G  N  W  I  L  K  L  E  M  A  A  T  A  T  A  S  S  T  G  P  R  Y  A  P  E  D  P  T  L  P  K  P  W  K  G  L  V  D  G  K  T  G  Y  L  Y  F  W  N  P  E  T  N  T  T  Q  Y  E  K  P  V  A  T  P  H  V  G  A  A  Q  H  K  S  S  V  S  V  S  S  S  V  E  R  P  S  Q  S  Q  C  S  D  H  G  D  N  R  G  T  N  G  A  L  S  K  L  S  S  G  E  G  I  Q  :  T  A  R  A  N  E  L  S  R  D  E  T  S  A  P  K  G  Y  S  A  S  A  A  A  S  D  I  S  P  D  A  Y  R  R  Q  H  E  I  S  V  S  :  G  G  D  V  P  P  P  F  T  S  F  E  A  T  G  F  P  S  E  I  L  R  E  :  I  H  Q  A  G  F  P  A  P  S  P  I  Q  A  Q  S  W  P  I  A  L  Q  G  R  D  I  V  A  V  A  K  T  G  S  G  K  T  L  G  F  L  L  P  G  F  I  L  L  K  Q  R  R  S  N  P  Q  S  G  P  T  I  L  V  L  S  P  T  R  E  L  A  T  Q  I  Q  D  E  A  V  K  F  G  R  S  S  K  I  S  C  T  :  C  L  Y  G  G  A  P  K  G  P  Q  L  R  D  L  D  R  G  V  D  I  V  V  A  T  P  G  R  L  N  D  I  L  E  M  R  R  V  R  L  D  Q  V  S  Y  L  V  L  D  E  A  D  R  M  L  D  M  G  F  E  P  Q  I  R  K  I  V  K  E  V  P  T  R  R  Q  T  L  M  Y  T  A  T  W  P  K  E  V  R  R  I  A  A  D  L  L  V  N  P  V  Q  V  N  I  G  N  V  D  E  L  V  A  N  K  S  I  T  Q  :  Y  I  E  V  L  S  Y  M  D  K  Q  K  R  L  D  Q  I  L  R  S  Q  E  P  G  S  K  I  I  I  F  C  S  T  K  K  M  C  D  Q  L  A  R  N  L  T  H  P  F  G  A  A  A  I  H  G  D  K  S  Q  G  E  R  D  H  V  L  S  Q  F  R  T  G  K  S  P  V  L  V  A  T  D  V  A  A  R  G  L  D  V  K  D  I  R :   V  V  V  N  Y  D  F  P  T  G  I  E  D  Y  V  H  R  I  G  R  T  G  R  A  G  A  T  G  E  A  Y  T  F  F  V  D  Q  D  A  K  H  A  S  D  L  I  K  V  L  E  G  A  N  Q  Q  V  P  T  E  L  R  D  M  A  S  R  G  G  G  M  G  R  A  R  R  Q  W  D  S  G  S  G  G  R  E  G  G  H  G  G  R  Y  D  A  G  Y  G  G  R  D  G  A  R  G  G  W  E  A  P  S  S  E  R  S  G  R  V  Y  D  S  D  S  R  D  R :   D  R  H  G  H  G  S  D  A  P  A  S  F  H  G  R  S  F  H  E  T  M  M  Q  G  S  Q  R  R  D  R  S  R  S  R  S  P  N  R  G  S  G  W  G  D  R  K  G  R  E  R  S  R  S  R  S  A  E  R  S  E  R  T  R  I  Q  V  P  V  G  G  S  F  H  E  A  M  M  G  F  T  R  S  S  A  G  D  S  R  K  D  W  E  K  E  R  S  Q  G  D  G  K  S  G  D  G  P  R  A  N  N  W  E  E  *  E  G  K  G  E  P  V  L  I  F  D  V  L  *  E  M  L  E  E  K  G  V  I  F  V  K  L  *  P  L  H  V  L  A  N  S  V  L  G  *  K  K  L  L  A  Y  Y  W  K  *  I  A  E  N  L  Q  M  G  S  F  *  R  M  *  M  *  S  I  L  P  S  N  F  V  *  W  N  Q  P  T  S  K  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0123B22.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="146986" stop="147146"/>
                    <exon start="150685" stop="151018"/>
                    <exon start="151993" stop="152115"/>
                    <exon start="152802" stop="152870"/>
                    <exon start="153384" stop="153653"/>
                    <exon start="154325" stop="154675"/>
                    <exon start="154872" stop="155149"/>
                    <exon start="156030" stop="156404"/>
                    <exon start="156488" stop="156833"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2304</number_coding_nucleotides>
                  <number_encoded_amino_acids>768</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VSLCFSAASLIPLYTFIYKLFSRVSGRENGRETSSEVGIVCISFFYRHRKDFVRGNWILKLEMAATATASSTGPRYAPEDPTLPKPWKGLVDGKTGYLYFWNPETNTTQYEKPVATPHVGAAQHKSSVSVSSSVERPSQSQCSDHGDNRGTNGALSKLSSGEGIQTARANELSRDETSAPKGYSASAAASDISPDAYRRQHEISVSGGDVPPPFTSFEATGFPSEILREIHQAGFPAPSPIQAQSWPIALQGRDIVAVAKTGSGKTLGFLLPGFILLKQRRSNPQSGPTILVLSPTRELATQIQDEAVKFGRSSKISCTCLYGGAPKGPQLRDLDRGVDIVVATPGRLNDILEMRRVRLDQVSYLVLDEADRMLDMGFEPQIRKIVKEVPTRRQTLMYTATWPKEVRRIAADLLVNPVQVNIGNVDELVANKSITQYIEVLSYMDKQKRLDQILRSQEPGSKIIIFCSTKKMCDQLARNLTHPFGAAAIHGDKSQGERDHVLSQFRTGKSPVLVATDVAARGLDVKDIRVVVNYDFPTGIEDYVHRIGRTGRAGATGEAYTFFVDQDAKHASDLIKVLEGANQQVPTELRDMASRGGGMGRARRQWDSGSGGREGGHGGRYDAGYGGRDGARGGWEAPSSERSGRVYDSDSRDRDRHGHGSDAPASFHGRSFHETMMQGSQRRDRSRSRSPNRGSGWGDRKGRERSRSRSAERSERTRIQVPVGGSFHEAMMGFTRSSAGDSRKDWEKERSQGDGKSGDGPRANNWEE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="161044" PGL_stop="156442"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="161044" e_stop="160430"/>
            <exon e_start="159759" e_stop="159607"/>
            <exon e_start="159366" e_stop="159281"/>
            <exon e_start="158990" e_stop="158906"/>
            <exon e_start="158648" e_stop="158526"/>
            <exon e_start="158433" e_stop="158356"/>
            <exon e_start="158018" e_stop="157889"/>
            <exon e_start="157751" e_stop="157384"/>
            <exon e_start="156530" e_stop="156442"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.961" acc_prob="0.990" e_score="0.998"/>
          <exon-intron don_prob="1.000" acc_prob="0.732" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.955" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.968" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.674" acc_prob="0.000" e_score="0.986"/>
          <exon-only e_score="0.506"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="161044" e_stop="160430" e_length="615"/>
          </exon>
          <intron i_serial="1" don_prob="0.961" acc_prob="0.990">
            <gDNA_intron_boundary i_start="160429" i_stop="159760" i_length="670"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="159759" e_stop="159607" e_length="153"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.732">
            <gDNA_intron_boundary i_start="159606" i_stop="159367" i_length="240"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="159366" e_stop="159281" e_length="86"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.990">
            <gDNA_intron_boundary i_start="159280" i_stop="158991" i_length="290"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="158990" e_stop="158906" e_length="85"/>
          </exon>
          <intron i_serial="4" don_prob="0.958" acc_prob="0.000">
            <gDNA_intron_boundary i_start="158905" i_stop="158649" i_length="257"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="158648" e_stop="158526" e_length="123"/>
          </exon>
          <intron i_serial="5" don_prob="0.970" acc_prob="0.955">
            <gDNA_intron_boundary i_start="158525" i_stop="158434" i_length="92"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="158433" e_stop="158356" e_length="78"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.968">
            <gDNA_intron_boundary i_start="158355" i_stop="158019" i_length="337"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="158018" e_stop="157889" e_length="130"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.976">
            <gDNA_intron_boundary i_start="157888" i_stop="157752" i_length="137"/>
          </intron>
          <exon e_serial="8" e_score="0.986">
            <gDNA_exon_boundary e_start="157751" e_stop="157384" e_length="368"/>
          </exon>
          <intron i_serial="8" don_prob="0.674" acc_prob="0.000">
            <gDNA_intron_boundary i_start="157383" i_stop="156531" i_length="853"/>
          </intron>
          <exon e_serial="9" e_score="0.506">
            <gDNA_exon_boundary e_start="156530" e_stop="156442" e_length="89"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="161044" stop="160430"/>
              <exon start="159759" stop="159607"/>
              <exon start="159366" stop="159281"/>
              <exon start="158990" stop="158906"/>
              <exon start="158648" stop="158526"/>
              <exon start="158433" stop="158356"/>
              <exon start="158018" stop="157889"/>
              <exon start="157751" stop="157384"/>
              <exon start="156530" stop="156442"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U566605" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGTTGTTTCTCCTCCCTGCTAAAGTTGTGCAATATTCATTTTTTATCTGTTGCCAACATATAGATGTATAATTGAAATTTCAATGGAAGAATGTCAACCATCAATGTCGATATAAGCTGATACGAAATAGATTTAGCTCTCAACCATAAACCATGGGAACCTCTACATTTTACATGTCTCTTCCCACACCATTTCTAAAGCCTCAAAAACCTTCCAATAAAATCTTCATTACCAGTAGTAATAAGTTCAACTCAGCTCTTCAGCATTATGCTTTGCACAAGCCAAAAAGTTGTTCGATTCGAAAAACTAGTGTTGCTATTCTGGCGAAAAGTTCATGTAGACTGGATCTGTTCAAAGTGAGGGCTGTAGCAGAAAATGCAGGTGAATCTGAGGTTGTGAAACCCAAGGAAGTGATACAGACGCTTCAACTGGGCGCGATGTTTGGAATTTGGTACCTTTTGAATATTTGTTATAATATTTACAACAAACAGGTACTCAAGGTTTTTCCATTTCCGGCGACTGTTACGGCCTCACAATTTGGCTGTGGGACTTTGTTAATACTCTTTATGTGGGGATTTCGTCTTCATCCGATACCAAAAATCAGTAAATCTCAA : TTTAAAGCAATATTCGCACTAGCTGCAATTCACACATTGGGTAATGTTCTAACGAACATCAGTCTTGGGAGAGTAGCCGTTTCGTTTACTCACACAATCAAAGCAATGGAACCATTCTTCACCGTGCTTCTTTCCGCGCTGTTTCTTGCAGAG : CGGCCATCTCCTTGGATTGTATCTTCTCTGGTTCCCGTTGTTGGTGGAGTAGCATTAGCATCAATGACAGAGGCCTCTTTTAATTG : GATAGGCTTTGGCAGTGCAATGGCTTCCAATCTGACTAACCAATCGCGTAATGTATTTAGCAAAAAATTCATGGTTAAAGAGGAG : GAGGCATTGGACAATATCAATTTGTTCTCTATGATCACAATCATTTCATTCATCCTTTTGGTACCTGCTGCCATTTTGATGGAAGGGATCAAGCTTACTCCATCCTATCTACAATATACTGCT : GCAAGTCAAGGTTTACATGTCAGAGAGCTTTGTGTGAGACTTCTTTTAGCTGGATTCTGCTTGCACAGTTACCAACAG : GTTTCATACATGATACTACAGATGGTATCACCAGTGACACATGCAGTTGGTAATTGTCTGAAGAGAGTGGTAGTCATTGTATCCTCAGTCATCTTCTTCCAAACACCCGTTTCACCAATTAACTCCCTTG : GGACTGCTATGGCTCTAGCTGGAGTCTTTCTTTATTCAAGAGTAAAGAGATTACGGGGGAAGCCAAAAGATGCGTGACAAGTGAAGAAAGTTGTCAAATCCTGTAGTCATAATGCCCTGTAAAGAAAAGGTTAACCAAAAACAGGAACTCGTGGATTGGGTTCGAGTTATAGGAAGATTAGGTCAGGAACTAGCAAGTAGTTTGAGAATCCCTGTCAATAATGGAAGGATGGCAAAAGATGGAAGAAGATATTTAAAGCAATCGTTATTGCATTTCAAGATGTGTAATTTATACATTAGTGCAATACCAAAATCAACTACTAAGGCCTATGACTGAAACTGAATTATTCTGATCTGGCGGAAAATCAT : ATGGAAACTAGCTGGAGCATCAGAGCCATGACCATGTCTATCTCTAAACAAATCACAACCAATTAGTCAGAACATGGAAAAAAAAAGGA</gDNA_template>
            <first_frame> W  L  F  L  L  P  A  K  V  V  Q  Y  S  F  F  I  C  C  Q  H  I  D  V  *  L  K  F  Q  W  K  N  V  N  H  Q  C  R  Y  K  L  I  R  N  R  F  S  S  Q  P  *  T  M  G  T  S  T  F  Y  M  S  L  P  T  P  F  L  K  P  Q  K  P  S  N  K  I  F  I  T  S  S  N  K  F  N  S  A  L  Q  H  Y  A  L  H  K  P  K  S  C  S  I  R  K  T  S  V  A  I  L  A  K  S  S  C  R  L  D  L  F  K  V  R  A  V  A  E  N  A  G  E  S  E  V  V  K  P  K  E  V  I  Q  T  L  Q  L  G  A  M  F  G  I  W  Y  L  L  N  I  C  Y  N  I  Y  N  K  Q  V  L  K  V  F  P  F  P  A  T  V  T  A  S  Q  F  G  C  G  T  L  L  I  L  F  M  W  G  F  R  L  H  P  I  P  K  I  S  K  S  Q  :  F  K  A  I  F  A  L  A  A  I  H  T  L  G  N  V  L  T  N  I  S  L  G  R  V  A  V  S  F  T  H  T  I  K  A  M  E  P  F  F  T  V  L  L  S  A  L  F  L  A  E  :  R  P  S  P  W  I  V  S  S  L  V  P  V  V  G  G  V  A  L  A  S  M  T  E  A  S  F  N  W :   I  G  F  G  S  A  M  A  S  N  L  T  N  Q  S  R  N  V  F  S  K  K  F  M  V  K  E  E  :  E  A  L  D  N  I  N  L  F  S  M  I  T  I  I  S  F  I  L  L  V  P  A  A  I  L  M  E  G  I  K  L  T  P  S  Y  L  Q  Y  T  A  :  A  S  Q  G  L  H  V  R  E  L  C  V  R  L  L  L  A  G  F  C  L  H  S  Y  Q  Q  :  V  S  Y  M  I  L  Q  M  V  S  P  V  T  H  A  V  G  N  C  L  K  R  V  V  V  I  V  S  S  V  I  F  F  Q  T  P  V  S  P  I  N  S  L   : G  T  A  M  A  L  A  G  V  F  L  Y  S  R  V  K  R  L  R  G  K  P  K  D  A  *  Q  V  K  K  V  V  K  S  C  S  H  N  A  L  *  R  K  G  *  P  K  T  G  T  R  G  L  G  S  S  Y  R  K  I  R  S  G  T  S  K  *  F  E  N  P  C  Q  *  W  K  D  G  K  R  W  K  K  I  F  K  A  I  V  I  A  F  Q  D  V  *  F  I  H  *  C  N  T  K  I  N  Y  *  G  L  *  L  K  L  N  Y  S  D  L  A  E  N  H  :  M  E  T  S  W  S  I  R  A  M  T  M  S  I  S  K  Q  I  T  T  N  *  S  E  H  G  K  K  K   </first_frame>
            <second_frame>  G  C  F  S  S  L  L  K  L  C  N  I  H  F  L  S  V  A  N  I  *  M  Y  N  *  N  F  N  G  R  M  S  T  I  N  V  D  I  S  *  Y  E  I  D  L  A  L  N  H  K  P  W  E  P  L  H  F  T  C  L  F  P  H  H  F  *  S  L  K  N  L  P  I  K  S  S  L  P  V  V  I  S  S  T  Q  L  F  S  I  M  L  C  T  S  Q  K  V  V  R  F  E  K  L  V  L  L  F  W  R  K  V  H  V  D  W  I  C  S  K  *  G  L  *  Q  K  M  Q  V  N  L  R  L  *  N  P  R  K  *  Y  R  R  F  N  W  A  R  C  L  E  F  G  T  F  *  I  F  V  I  I  F  T  T  N  R  Y  S  R  F  F  H  F  R  R  L  L  R  P  H  N  L  A  V  G  L  C  *  Y  S  L  C  G  D  F  V  F  I  R  Y  Q  K  S  V  N  L  N :   L  K  Q  Y  S  H  *  L  Q  F  T  H  W  V  M  F  *  R  T  S  V  L  G  E  *  P  F  R  L  L  T  Q  S  K  Q  W  N  H  S  S  P  C  F  F  P  R  C  F  L  Q  S :   G  H  L  L  G  L  Y  L  L  W  F  P  L  L  V  E  *  H  *  H  Q  *  Q  R  P  L  L  I   : G  *  A  L  A  V  Q  W  L  P  I  *  L  T  N  R  V  M  Y  L  A  K  N  S  W  L  K  R  R :   R  H  W  T  I  S  I  C  S  L  *  S  Q  S  F  H  S  S  F  W  Y  L  L  P  F  *  W  K  G  S  S  L  L  H  P  I  Y  N  I  L  L :   Q  V  K  V  Y  M  S  E  S  F  V  *  D  F  F  *  L  D  S  A  C  T  V  T  N  R :   F  H  T  *  Y  Y  R  W  Y  H  Q  *  H  M  Q  L  V  I  V  *  R  E  W  *  S  L  Y  P  Q  S  S  S  S  K  H  P  F  H  Q  L  T  P  L  :  G  L  L  W  L  *  L  E  S  F  F  I  Q  E  *  R  D  Y  G  G  S  Q  K  M  R  D  K  *  R  K  L  S  N  P  V  V  I  M  P  C  K  E  K  V  N  Q  K  Q  E  L  V  D  W  V  R  V  I  G  R  L  G  Q  E  L  A  S  S  L  R  I  P  V  N  N  G  R  M  A  K  D  G  R  R  Y  L  K  Q  S  L  L  H  F  K  M  C  N  L  Y  I  S  A  I  P  K  S  T  T  K  A  Y  D  *  N  *  I  I  L  I  W  R  K  I  I :   W  K  L  A  G  A  S  E  P  *  P  C  L  S  L  N  K  S  Q  P  I  S  Q  N  M  E  K  K  R  </second_frame>
            <third_frame>   V  V  S  P  P  C  *  S  C  A  I  F  I  F  Y  L  L  P  T  Y  R  C  I  I  E  I  S  M  E  E  C  Q  P  S  M  S  I  *  A  D  T  K  *  I  *  L  S  T  I  N  H  G  N  L  Y  I  L  H  V  S  S  H  T  I  S  K  A  S  K  T  F  Q  *  N  L  H  Y  Q  *  *  *  V  Q  L  S  S  S  A  L  C  F  A  Q  A  K  K  L  F  D  S  K  N  *  C  C  Y  S  G  E  K  F  M  *  T  G  S  V  Q  S  E  G  C  S  R  K  C  R  *  I  *  G  C  E  T  Q  G  S  D  T  D  A  S  T  G  R  D  V  W  N  L  V  P  F  E  Y  L  L  *  Y  L  Q  Q  T  G  T  Q  G  F  S  I  S  G  D  C  Y  G  L  T  I  W  L  W  D  F  V  N  T  L  Y  V  G  I  S  S  S  S  D  T  K  N  Q  *  I  S   : I  *  S  N  I  R  T  S  C  N  S  H  I  G  *  C  S  N  E  H  Q  S  W  E  S  S  R  F  V  Y  S  H  N  Q  S  N  G  T  I  L  H  R  A  S  F  R  A  V  S  C  R   : A  A  I  S  L  D  C  I  F  S  G  S  R  C  W  W  S  S  I  S  I  N  D  R  G  L  F  *  L  :  D  R  L  W  Q  C  N  G  F  Q  S  D  *  P  I  A  *  C  I  *  Q  K  I  H  G  *  R  G   : G  G  I  G  Q  Y  Q  F  V  L  Y  D  H  N  H  F  I  H  P  F  G  T  C  C  H  F  D  G  R  D  Q  A  Y  S  I  L  S  T  I  Y  C   : C  K  S  R  F  T  C  Q  R  A  L  C  E  T  S  F  S  W  I  L  L  A  Q  L  P  T   : G  F  I  H  D  T  T  D  G  I  T  S  D  T  C  S  W  *  L  S  E  E  S  G  S  H  C  I  L  S  H  L  L  P  N  T  R  F  T  N  *  L  P  W :   D  C  Y  G  S  S  W  S  L  S  L  F  K  S  K  E  I  T  G  E  A  K  R  C  V  T  S  E  E  S  C  Q  I  L  *  S  *  C  P  V  K  K  R  L  T  K  N  R  N  S  W  I  G  F  E  L  *  E  D  *  V  R  N  *  Q  V  V  *  E  S  L  S  I  M  E  G  W  Q  K  M  E  E  D  I  *  S  N  R  Y  C  I  S  R  C  V  I  Y  T  L  V  Q  Y  Q  N  Q  L  L  R  P  M  T  E  T  E  L  F  *  S  G  G  K  S   : Y  G  N  *  L  E  H  Q  S  H  D  H  V  Y  L  *  T  N  H  N  Q  L  V  R  T  W  K  K  K  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0123B22.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="160894" stop="160430"/>
                    <exon start="159759" stop="159607"/>
                    <exon start="159366" stop="159281"/>
                    <exon start="158990" stop="158906"/>
                    <exon start="158648" stop="158526"/>
                    <exon start="158433" stop="158356"/>
                    <exon start="158018" stop="157889"/>
                    <exon start="157751" stop="157675"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1194</number_coding_nucleotides>
                  <number_encoded_amino_acids>398</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMGTSTFYMSLPTPFLKPQKPSNKIFITSSNKFNSALQHYALHKPKSCSIRKTSVAILAKSSCRLDLFKVRAVAENAGESEVVKPKEVIQTLQLGAMFGIWYLLNICYNIYNKQVLKVFPFPATVTASQFGCGTLLILFMWGFRLHPIPKISKSQFKAIFALAAIHTLGNVLTNISLGRVAVSFTHTIKAMEPFFTVLLSALFLAERPSPWIVSSLVPVVGGVALASMTEASFNWIGFGSAMASNLTNQSRNVFSKKFMVKEEEALDNINLFSMITIISFILLVPAAILMEGIKLTPSYLQYTAASQGLHVRELCVRLLLAGFCLHSYQQVSYMILQMVSPVTHAVGNCLKRVVVIVSSVIFFQTPVSPINSLGTAMALAGVFLYSRVKRLRGKPKDA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0123B22.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="157667" stop="157416"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKLSNPVVIMPCKEKVNQKQELVDWVRVIGRLGQELASSLRIPVNNGRMAKDGRRYLKQSLLHFKMCNLYISAIPKSTTKAYD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="159541" e_stop="158786"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="159541" e_stop="158786" e_length="756"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="159541" stop="158786"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U587086" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTTTACTTGTTTACTAAACGCGTGATATAAGCTATAACCGCGTAGCATAACTTTATGGAGAACAGCCTCATGTATCTTTGATTCTGACGATCTGATTCTTATCCCTTTGAGTATTACACTAGAAATTCAGCTTATTTAGCATATATAATGATGAGCTTGTTGTGATCCACGTAGCGGCCATCTCCTTGGATTGTATCTTCTCTGGTTCCCGTTGTTGGTGGAGTAGCATTAGCATCAATGACAGAGGCCTCTTTTAATTGGTATGTCCCTCCCTAACTTTGTAAATTTTATCGTTTTGTTTCTGTAGGTTAGACCGGTCTATATATTGCTCTCTCCTTGTGCCTATTTTGCTGTAGGGGGCGGTTTACAGGTGTACAACCTCTGTAACTTCATGGTATATTTATGGATTGACAAGTTCTTATTAGAAGACTGCAATTTCCTAACTGTCGCACTATCTACTCCTGTTAATAGTTTTGCACAGTTATTGTTGTTACTGTGGGGTCTTAATAGCAGTTATACATTGATTCTGAACTCTCTGTCTTTGGAACAGGATAGGCTTTGGCAGTGCAATGGCTTCCAATCTGACTAACCAATCGCGTAATGTATTTAGCAAAAAATTCATGGTTAAAGAGGAGGTATAGACACTAAACATTCAGATGCTAGGAAAATAAATACTCAATTATTCTAACATCATAGGTATTCAAATTCAGCTATCTTACTTCTTATATTAAAAAAACAGTCGTAGCCTTGGGGTG</gDNA_template>
            <first_frame> T  L  L  V  Y  *  T  R  D  I  S  Y  N  R  V  A  *  L  Y  G  E  Q  P  H  V  S  L  I  L  T  I  *  F  L  S  L  *  V  L  H  *  K  F  S  L  F  S  I  Y  N  D  E  L  V  V  I  H  V  A  A  I  S  L  D  C  I  F  S  G  S  R  C  W  W  S  S  I  S  I  N  D  R  G  L  F  *  L  V  C  P  S  L  T  L  *  I  L  S  F  C  F  C  R  L  D  R  S  I  Y  C  S  L  L  V  P  I  L  L  *  G  A  V  Y  R  C  T  T  S  V  T  S  W  Y  I  Y  G  L  T  S  S  Y  *  K  T  A  I  S  *  L  S  H  Y  L  L  L  L  I  V  L  H  S  Y  C  C  Y  C  G  V  L  I  A  V  I  H  *  F  *  T  L  C  L  W  N  R  I  G  F  G  S  A  M  A  S  N  L  T  N  Q  S  R  N  V  F  S  K  K  F  M  V  K  E  E  V  *  T  L  N  I  Q  M  L  G  K  *  I  L  N  Y  S  N  I  I  G  I  Q  I  Q  L  S  Y  F  L  Y  *  K  N  S  R  S  L  G  V </first_frame>
            <second_frame>  L  Y  L  F  T  K  R  V  I  *  A  I  T  A  *  H  N  F  M  E  N  S  L  M  Y  L  *  F  *  R  S  D  S  Y  P  F  E  Y  Y  T  R  N  S  A  Y  L  A  Y  I  M  M  S  L  L  *  S  T  *  R  P  S  P  W  I  V  S  S  L  V  P  V  V  G  G  V  A  L  A  S  M  T  E  A  S  F  N  W  Y  V  P  P  *  L  C  K  F  Y  R  F  V  S  V  G  *  T  G  L  Y  I  A  L  S  L  C  L  F  C  C  R  G  R  F  T  G  V  Q  P  L  *  L  H  G  I  F  M  D  *  Q  V  L  I  R  R  L  Q  F  P  N  C  R  T  I  Y  S  C  *  *  F  C  T  V  I  V  V  T  V  G  S  *  *  Q  L  Y  I  D  S  E  L  S  V  F  G  T  G  *  A  L  A  V  Q  W  L  P  I  *  L  T  N  R  V  M  Y  L  A  K  N  S  W  L  K  R  R  Y  R  H  *  T  F  R  C  *  E  N  K  Y  S  I  I  L  T  S  *  V  F  K  F  S  Y  L  T  S  Y  I  K  K  T  V  V  A  L  G   </second_frame>
            <third_frame>   F  T  C  L  L  N  A  *  Y  K  L  *  P  R  S  I  T  L  W  R  T  A  S  C  I  F  D  S  D  D  L  I  L  I  P  L  S  I  T  L  E  I  Q  L  I  *  H  I  *  *  *  A  C  C  D  P  R  S  G  H  L  L  G  L  Y  L  L  W  F  P  L  L  V  E  *  H  *  H  Q  *  Q  R  P  L  L  I  G  M  S  L  P  N  F  V  N  F  I  V  L  F  L  *  V  R  P  V  Y  I  L  L  S  P  C  A  Y  F  A  V  G  G  G  L  Q  V  Y  N  L  C  N  F  M  V  Y  L  W  I  D  K  F  L  L  E  D  C  N  F  L  T  V  A  L  S  T  P  V  N  S  F  A  Q  L  L  L  L  L  W  G  L  N  S  S  Y  T  L  I  L  N  S  L  S  L  E  Q  D  R  L  W  Q  C  N  G  F  Q  S  D  *  P  I  A  *  C  I  *  Q  K  I  H  G  *  R  G  G  I  D  T  K  H  S  D  A  R  K  I  N  T  Q  L  F  *  H  H  R  Y  S  N  S  A  I  L  L  L  I  L  K  K  Q  S  *  P  W  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0123B22.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="159233" stop="158952"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VRPVYILLSPCAYFAVGGGLQVYNLCNFMVYLWIDKFLLEDCNFLTVALSTPVNSFAQLLLLLWGLNSSYTLILNSLSLEQDRLWQCNGFQSD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="168630" PGL_stop="164757"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="168630" e_stop="168487"/>
            <exon e_start="166838" e_stop="166363"/>
            <exon e_start="165486" e_stop="165242"/>
            <exon e_start="165146" e_stop="164757"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.958" acc_prob="0.992" e_score="0.993"/>
          <exon-intron don_prob="0.999" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.473" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="168630" e_stop="168487" e_length="144"/>
          </exon>
          <intron i_serial="1" don_prob="0.958" acc_prob="0.992">
            <gDNA_intron_boundary i_start="168486" i_stop="166839" i_length="1648"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="166838" e_stop="166363" e_length="476"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.988">
            <gDNA_intron_boundary i_start="166362" i_stop="165487" i_length="876"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="165486" e_stop="165242" e_length="245"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.473">
            <gDNA_intron_boundary i_start="165241" i_stop="165147" i_length="95"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="165146" e_stop="164757" e_length="390"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="168630" stop="168487"/>
              <exon start="166838" stop="166363"/>
              <exon start="165486" stop="165242"/>
              <exon start="165146" stop="164757"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U570897" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAACAACAATACATTACGTATACCCCAGACCCCGCCTCGTCTTCTTCCTCGAACTCACCAGTGCGAAACCCAGCAAGCCCAGACCCCGCTCTACTCGCTCTTCGTACAGTATTCCGGCCTTCATCGTCGGTAGCATCGGCATCT : ATAATTAAGATTCAACCATTCTACATGATTCTTCCAATTGACCCAGCAAATAAATTATCGTTTAAGCGTTTTATTAAAGATGGAGATTTGGTCATTGTGTACGAGAGGCACGACACAATGAAAGCAGTGAAAGTCAGTGAGGATGGGGTTCTGCAGAATCGTTTTGGTGCTTTTAAGCATTCTGAATGGATAGGTAAACCTTTTGGGTCCAAGGTTTTGAGTAACAAAGGTGCTTTTGTTTACTTGTTAGCTCCAACTCCTGAGCTATGGACGCTAGTACTGAGTCACAGAACCCAGATTCTTTATATAGCTGATATTAGTTTTGTTGTTATGTACCTGGAGATCGTTCCTGGTTGTGTGGTTCTTGAATCTGGTACTGGAAGTGGATCTTTGACGACTTCGCTTGCAAGGGCTGTTGCCCCCACTGGCCATGTTTATACCTTCGATTTCCATGAACAGAGAGCTGCCTCAGCTAG : GGAGGACTTTGAAAAAACAGGGTTGAGCAGTCTGGTCACAGTAGGAGTAAGAGATATACAGGGCGAGGGATTCCCTGATGAGTTTTGTGGGAGAGCAGATTCAGTATTCTTAGACCTTCCTCAACCTTGGCTTGTCATTCCTTCTGCTGGCAAAATGTTGAAACCAGATGGGGTATTGTGCTCCTTCTCTCCATGCATTGAGCAAGTACAGCGCTCATGTGAAGCACTCAAATCACAGTTTACAG : ATATAAGAACATTTGAAGTACTTCTTCGCACCTATGAAGTTAGACAAAAGATACTAGAGAGCTGCCCAGTAAATGAAGGAGATTCTATTGAGCGTCCTCCACGGAAGAGGAGGCAGGGTTCTGCTGAAGGAAGCAATGGGACTGAATGCTCCTCTTCTCCTGCGGTGGTGATTAGGCCTTCTGGTGAGGCAAGAGGTCATACAGGCTATTTGACATTTGCCAGACTCAAATGTTTTGTGTAATGTGTTTTGATGAATATCCAGTTCTTGTGGTCGAGTACACTGTTCGTTCTTTAGATGTTGTGCTTATTTTTCTTCTTGATTCTACAATTAGATATCAGACAATTTTGTCTTGAGATTTAACAAAAAGGAAAAGAATCGCTTCTATTCG</gDNA_template>
            <first_frame> E  Q  Q  Y  I  T  Y  T  P  D  P  A  S  S  S  S  S  N  S  P  V  R  N  P  A  S  P  D  P  A  L  L  A  L  R  T  V  F  R  P  S  S  S  V  A  S  A  S  :  I  I  K  I  Q  P  F  Y  M  I  L  P  I  D  P  A  N  K  L  S  F  K  R  F  I  K  D  G  D  L  V  I  V  Y  E  R  H  D  T  M  K  A  V  K  V  S  E  D  G  V  L  Q  N  R  F  G  A  F  K  H  S  E  W  I  G  K  P  F  G  S  K  V  L  S  N  K  G  A  F  V  Y  L  L  A  P  T  P  E  L  W  T  L  V  L  S  H  R  T  Q  I  L  Y  I  A  D  I  S  F  V  V  M  Y  L  E  I  V  P  G  C  V  V  L  E  S  G  T  G  S  G  S  L  T  T  S  L  A  R  A  V  A  P  T  G  H  V  Y  T  F  D  F  H  E  Q  R  A  A  S  A  R :   E  D  F  E  K  T  G  L  S  S  L  V  T  V  G  V  R  D  I  Q  G  E  G  F  P  D  E  F  C  G  R  A  D  S  V  F  L  D  L  P  Q  P  W  L  V  I  P  S  A  G  K  M  L  K  P  D  G  V  L  C  S  F  S  P  C  I  E  Q  V  Q  R  S  C  E  A  L  K  S  Q  F  T   : D  I  R  T  F  E  V  L  L  R  T  Y  E  V  R  Q  K  I  L  E  S  C  P  V  N  E  G  D  S  I  E  R  P  P  R  K  R  R  Q  G  S  A  E  G  S  N  G  T  E  C  S  S  S  P  A  V  V  I  R  P  S  G  E  A  R  G  H  T  G  Y  L  T  F  A  R  L  K  C  F  V  *  C  V  L  M  N  I  Q  F  L  W  S  S  T  L  F  V  L  *  M  L  C  L  F  F  F  L  I  L  Q  L  D  I  R  Q  F  C  L  E  I  *  Q  K  G  K  E  S  L  L  F  </first_frame>
            <second_frame>  N  N  N  T  L  R  I  P  Q  T  P  P  R  L  L  P  R  T  H  Q  C  E  T  Q  Q  A  Q  T  P  L  Y  S  L  F  V  Q  Y  S  G  L  H  R  R  *  H  R  H  L :   *  L  R  F  N  H  S  T  *  F  F  Q  L  T  Q  Q  I  N  Y  R  L  S  V  L  L  K  M  E  I  W  S  L  C  T  R  G  T  T  Q  *  K  Q  *  K  S  V  R  M  G  F  C  R  I  V  L  V  L  L  S  I  L  N  G  *  V  N  L  L  G  P  R  F  *  V  T  K  V  L  L  F  T  C  *  L  Q  L  L  S  Y  G  R  *  Y  *  V  T  E  P  R  F  F  I  *  L  I  L  V  L  L  L  C  T  W  R  S  F  L  V  V  W  F  L  N  L  V  L  E  V  D  L  *  R  L  R  L  Q  G  L  L  P  P  L  A  M  F  I  P  S  I  S  M  N  R  E  L  P  Q  L   : G  R  T  L  K  K  Q  G  *  A  V  W  S  Q  *  E  *  E  I  Y  R  A  R  D  S  L  M  S  F  V  G  E  Q  I  Q  Y  S  *  T  F  L  N  L  G  L  S  F  L  L  L  A  K  C  *  N  Q  M  G  Y  C  A  P  S  L  H  A  L  S  K  Y  S  A  H  V  K  H  S  N  H  S  L  Q  :  I  *  E  H  L  K  Y  F  F  A  P  M  K  L  D  K  R  Y  *  R  A  A  Q  *  M  K  E  I  L  L  S  V  L  H  G  R  G  G  R  V  L  L  K  E  A  M  G  L  N  A  P  L  L  L  R  W  *  L  G  L  L  V  R  Q  E  V  I  Q  A  I  *  H  L  P  D  S  N  V  L  C  N  V  F  *  *  I  S  S  S  C  G  R  V  H  C  S  F  F  R  C  C  A  Y  F  S  S  *  F  Y  N  *  I  S  D  N  F  V  L  R  F  N  K  K  E  K  N  R  F  Y  S </second_frame>
            <third_frame>   T  T  I  H  Y  V  Y  P  R  P  R  L  V  F  F  L  E  L  T  S  A  K  P  S  K  P  R  P  R  S  T  R  S  S  Y  S  I  P  A  F  I  V  G  S  I  G  I   : Y  N  *  D  S  T  I  L  H  D  S  S  N  *  P  S  K  *  I  I  V  *  A  F  Y  *  R  W  R  F  G  H  C  V  R  E  A  R  H  N  E  S  S  E  S  Q  *  G  W  G  S  A  E  S  F  W  C  F  *  A  F  *  M  D  R  *  T  F  W  V  Q  G  F  E  *  Q  R  C  F  C  L  L  V  S  S  N  S  *  A  M  D  A  S  T  E  S  Q  N  P  D  S  L  Y  S  *  Y  *  F  C  C  Y  V  P  G  D  R  S  W  L  C  G  S  *  I  W  Y  W  K  W  I  F  D  D  F  A  C  K  G  C  C  P  H  W  P  C  L  Y  L  R  F  P  *  T  E  S  C  L  S  *  :  G  G  L  *  K  N  R  V  E  Q  S  G  H  S  R  S  K  R  Y  T  G  R  G  I  P  *  *  V  L  W  E  S  R  F  S  I  L  R  P  S  S  T  L  A  C  H  S  F  C  W  Q  N  V  E  T  R  W  G  I  V  L  L  L  S  M  H  *  A  S  T  A  L  M  *  S  T  Q  I  T  V  Y  R :   Y  K  N  I  *  S  T  S  S  H  L  *  S  *  T  K  D  T  R  E  L  P  S  K  *  R  R  F  Y  *  A  S  S  T  E  E  E  A  G  F  C  *  R  K  Q  W  D  *  M  L  L  F  S  C  G  G  D  *  A  F  W  *  G  K  R  S  Y  R  L  F  D  I  C  Q  T  Q  M  F  C  V  M  C  F  D  E  Y  P  V  L  V  V  E  Y  T  V  R  S  L  D  V  V  L  I  F  L  L  D  S  T  I  R  Y  Q  T  I  L  S  *  D  L  T  K  R  K  R  I  A  S  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0123B22.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="168630" stop="168487"/>
                    <exon start="166838" stop="166363"/>
                    <exon start="165486" stop="165242"/>
                    <exon start="165146" stop="164905"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1104</number_coding_nucleotides>
                  <number_encoded_amino_acids>368</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EQQYITYTPDPASSSSSNSPVRNPASPDPALLALRTVFRPSSSVASASIIKIQPFYMILPIDPANKLSFKRFIKDGDLVIVYERHDTMKAVKVSEDGVLQNRFGAFKHSEWIGKPFGSKVLSNKGAFVYLLAPTPELWTLVLSHRTQILYIADISFVVMYLEIVPGCVVLESGTGSGSLTTSLARAVAPTGHVYTFDFHEQRAASAREDFEKTGLSSLVTVGVRDIQGEGFPDEFCGRADSVFLDLPQPWLVIPSAGKMLKPDGVLCSFSPCIEQVQRSCEALKSQFTDIRTFEVLLRTYEVRQKILESCPVNEGDSIERPPRKRRQGSAEGSNGTECSSSPAVVIRPSGEARGHTGYLTFARLKCFV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="195025" PGL_stop="189687"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="195025" e_stop="194708"/>
            <exon e_start="194630" e_stop="194587"/>
            <exon e_start="194481" e_stop="194372"/>
            <exon e_start="194070" e_stop="194033"/>
            <exon e_start="193558" e_stop="193481"/>
            <exon e_start="192951" e_stop="192898"/>
            <exon e_start="192818" e_stop="192717"/>
            <exon e_start="192611" e_stop="192523"/>
            <exon e_start="192421" e_stop="192318"/>
            <exon e_start="192175" e_stop="192107"/>
            <exon e_start="192015" e_stop="191900"/>
            <exon e_start="191758" e_stop="191724"/>
            <exon e_start="191641" e_stop="191499"/>
            <exon e_start="190582" e_stop="190460"/>
            <exon e_start="190008" e_stop="189687"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.970" acc_prob="0.998" e_score="0.997"/>
          <exon-intron don_prob="0.997" acc_prob="0.768" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.108" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.717" acc_prob="0.922" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.782" e_score="1.000"/>
          <exon-intron don_prob="0.964" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.922" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.400" acc_prob="0.937" e_score="1.000"/>
          <exon-intron don_prob="0.799" acc_prob="0.973" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.999" e_score="0.986"/>
          <exon-intron don_prob="0.997" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="195025" e_stop="194708" e_length="318"/>
          </exon>
          <intron i_serial="1" don_prob="0.970" acc_prob="0.998">
            <gDNA_intron_boundary i_start="194707" i_stop="194631" i_length="77"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="194630" e_stop="194587" e_length="44"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.768">
            <gDNA_intron_boundary i_start="194586" i_stop="194482" i_length="105"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="194481" e_stop="194372" e_length="110"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="194371" i_stop="194071" i_length="301"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="194070" e_stop="194033" e_length="38"/>
          </exon>
          <intron i_serial="4" don_prob="0.108" acc_prob="0.958">
            <gDNA_intron_boundary i_start="194032" i_stop="193559" i_length="474"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="193558" e_stop="193481" e_length="78"/>
          </exon>
          <intron i_serial="5" don_prob="0.717" acc_prob="0.922">
            <gDNA_intron_boundary i_start="193480" i_stop="192952" i_length="529"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="192951" e_stop="192898" e_length="54"/>
          </exon>
          <intron i_serial="6" don_prob="0.993" acc_prob="0.782">
            <gDNA_intron_boundary i_start="192897" i_stop="192819" i_length="79"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="192818" e_stop="192717" e_length="102"/>
          </exon>
          <intron i_serial="7" don_prob="0.964" acc_prob="0.998">
            <gDNA_intron_boundary i_start="192716" i_stop="192612" i_length="105"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="192611" e_stop="192523" e_length="89"/>
          </exon>
          <intron i_serial="8" don_prob="0.922" acc_prob="0.935">
            <gDNA_intron_boundary i_start="192522" i_stop="192422" i_length="101"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="192421" e_stop="192318" e_length="104"/>
          </exon>
          <intron i_serial="9" don_prob="0.990" acc_prob="0.992">
            <gDNA_intron_boundary i_start="192317" i_stop="192176" i_length="142"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="192175" e_stop="192107" e_length="69"/>
          </exon>
          <intron i_serial="10" don_prob="0.400" acc_prob="0.937">
            <gDNA_intron_boundary i_start="192106" i_stop="192016" i_length="91"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="192015" e_stop="191900" e_length="116"/>
          </exon>
          <intron i_serial="11" don_prob="0.799" acc_prob="0.973">
            <gDNA_intron_boundary i_start="191899" i_stop="191759" i_length="141"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="191758" e_stop="191724" e_length="35"/>
          </exon>
          <intron i_serial="12" don_prob="0.000" acc_prob="0.966">
            <gDNA_intron_boundary i_start="191723" i_stop="191642" i_length="82"/>
          </intron>
          <exon e_serial="13" e_score="0.986">
            <gDNA_exon_boundary e_start="191641" e_stop="191499" e_length="143"/>
          </exon>
          <intron i_serial="13" don_prob="0.981" acc_prob="0.999">
            <gDNA_intron_boundary i_start="191498" i_stop="190583" i_length="916"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="190582" e_stop="190460" e_length="123"/>
          </exon>
          <intron i_serial="14" don_prob="0.997" acc_prob="0.994">
            <gDNA_intron_boundary i_start="190459" i_stop="190009" i_length="451"/>
          </intron>
          <exon e_serial="15" e_score="0.997">
            <gDNA_exon_boundary e_start="190008" e_stop="189687" e_length="322"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="195025" stop="194708"/>
              <exon start="194630" stop="194587"/>
              <exon start="194481" stop="194372"/>
              <exon start="194070" stop="194033"/>
              <exon start="193558" stop="193481"/>
              <exon start="192951" stop="192898"/>
              <exon start="192818" stop="192717"/>
              <exon start="192611" stop="192523"/>
              <exon start="192421" stop="192318"/>
              <exon start="192175" stop="192107"/>
              <exon start="192015" stop="191900"/>
              <exon start="191758" stop="191724"/>
              <exon start="191641" stop="191499"/>
              <exon start="190582" stop="190460"/>
              <exon start="190008" stop="189687"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U584636" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGGACAAACACAACCGAGTTTTCTCACAGCGGCATTGACAACTTCTTAAAGCCAACTAAAGTGTTATGCTCGCCGTCCGACCCAGACTCCGGTGTTCCTCCATGGCCGGCGTCGCTTCTTTTGTCTCATCTTCATCGGCTTCAGCATCATCTATAGCTAGTAAAAAATTCTATTTTCAAGTCAATTCCAATCGGCAGCTCTTCAATAACAGAGTATCTCTCACTACGCGAATCCCTAATGCCTCCATTCGGTGCTTCGCTTCCACCTCTGGTCCGACTAGCAAAATCCTCGTTCAAAATCCCATAGTCGAAATGGACG : GTGATGAAATGACGAGGGTTATATGGAAAATGATCAAAGACAAG : CTAATCTATCCTTATCTAGAGTTGGATACAAAGTATTATGATTTAGGTATATTGAACCGTGATGCCACTGATGACCAAGTTACTGTTGAAAGTGCTGAGGCAACCCTGAA : ATACAATGTTGCTGTGAAATGCGCTACTATAACACCTG : ATGAGACCAGAGTCAAGGAATTTGGGCTGAAGTCTATGTGGAAAAGTCCCAATGGCACAATCAGAAACATTTTAAACG : GTACTGTTTTCCGGGAGCCTATACTATGCACGAACATTCCCAGGATTGTTCCTG : GTTGGAAGAAACCCATTTGTATTGGTAGGCATGCTTTTGGTGATCAGTATCGTGCCACAGATGCAATTATTAATGGGCCCGGAAAGCTCAAAATGGTTTTTG : TGCCGGAAAATGGGGAATCCCCTACGGAGCTGGATGTTTATGATTTTAAAGGTCCGGGTATTGCACTTGCCATGTACAATGTCGACCAG : TCAATTCGAGCATTTGCTGAATCATCAATGTCAATGGCATTTTCAAAGAAATGGCCTCTTTACTTGAGTACAAAAAACACAATTTTAAAGAAATACGATGGAAG : GTTTAAGGACATTTTTCAAGAGGTATACGAAGAGAAGTGGAAGCAACAGTTTGAGGAACACTCAATATG : GTATGAGCATAGACTGATAGATGACATGGTCGCTTATGTGTTAAAAAGCGAGGGTGGATATGTTTGGGCATGCAAGAACTATGATGGAGATGTCCAGAGTGATCTGCTCGCTCAAG : GATTTGGTTCTCTGGGCCTCATGACTTCTGTATTG : TTATCTTCTGATGGCAAGACATTAGAAGCTGAAGCAGCTCACGGCACTGTAACAAGACATTTTCGGCTGCATCAAAAGGGTCAAGAAACTAGTACAAACAGTGTTGCTTCCATTTTTGCATGGACAAGGGGACTTGGACATAG : GGCTCAGCTTGATGGGAATCAAAAGTTGTTGGAATTTGTTCACACCCTTGAAGCTTCTTGCATTGGGACAATAGAGTCCGGGAAGATGACTAAGGACTTAGCTATATTAGCTCACGGACCCAA : GGTGTCAAGAGAATTCTACTTGAACACTGAAGAATTTATTGATGCTGTAGCACAGAAACTTCAAGAGAAGCTTCATGCCTCGGCGCCTATTTAAGTTGTACTGGATTATGTAGTGAGAACATACATGTATGAGCTGAAGAAGATCATGAGCAGCATCCTTTCACTGTTAACATAACTCTACTCACACTGCCCGTTGAGACATTCTTTACTCTAGTTTTTGTAGTTGTTCAGGTACAAGATAACAGGTTGTTGAGTGGTCCCTTCATACTGATCTTCAATGGGTTGTGTATATTATTGTCTCGTTTTATTTAGGATCCTTCAT</gDNA_template>
            <first_frame> R  T  N  T  T  E  F  S  H  S  G  I  D  N  F  L  K  P  T  K  V  L  C  S  P  S  D  P  D  S  G  V  P  P  W  P  A  S  L  L  L  S  H  L  H  R  L  Q  H  H  L  *  L  V  K  N  S  I  F  K  S  I  P  I  G  S  S  S  I  T  E  Y  L  S  L  R  E  S  L  M  P  P  F  G  A  S  L  P  P  L  V  R  L  A  K  S  S  F  K  I  P  *  S  K  W  T  :  V  M  K  *  R  G  L  Y  G  K  *  S  K  T  S :   *  S  I  L  I  *  S  W  I  Q  S  I  M  I  *  V  Y  *  T  V  M  P  L  M  T  K  L  L  L  K  V  L  R  Q  P  *   : N  T  M  L  L  *  N  A  L  L  *  H  L  :  M  R  P  E  S  R  N  L  G  *  S  L  C  G  K  V  P  M  A  Q  S  E  T  F  *  T  :  V  L  F  S  G  S  L  Y  Y  A  R  T  F  P  G  L  F  L  :  V  G  R  N  P  F  V  L  V  G  M  L  L  V  I  S  I  V  P  Q  M  Q  L  L  M  G  P  E  S  S  K  W  F  L  :  C  R  K  M  G  N  P  L  R  S  W  M  F  M  I  L  K  V  R  V  L  H  L  P  C  T  M  S  T  S :   Q  F  E  H  L  L  N  H  Q  C  Q  W  H  F  Q  R  N  G  L  F  T  *  V  Q  K  T  Q  F  *  R  N  T  M  E   : G  L  R  T  F  F  K  R  Y  T  K  R  S  G  S  N  S  L  R  N  T  Q  Y   : G  M  S  I  D  *  *  M  T  W  S  L  M  C  *  K  A  R  V  D  M  F  G  H  A  R  T  M  M  E  M  S  R  V  I  C  S  L  K  :  D  L  V  L  W  A  S  *  L  L  Y  C :   Y  L  L  M  A  R  H  *  K  L  K  Q  L  T  A  L  *  Q  D  I  F  G  C  I  K  R  V  K  K  L  V  Q  T  V  L  L  P  F  L  H  G  Q  G  D  L  D  I   : G  L  S  L  M  G  I  K  S  C  W  N  L  F  T  P  L  K  L  L  A  L  G  Q  *  S  P  G  R  *  L  R  T  *  L  Y  *  L  T  D  P   : R  C  Q  E  N  S  T  *  T  L  K  N  L  L  M  L  *  H  R  N  F  K  R  S  F  M  P  R  R  L  F  K  L  Y  W  I  M  *  *  E  H  T  C  M  S  *  R  R  S  *  A  A  S  F  H  C  *  H  N  S  T  H  T  A  R  *  D  I  L  Y  S  S  F  C  S  C  S  G  T  R  *  Q  V  V  E  W  S  L  H  T  D  L  Q  W  V  V  Y  I  I  V  S  F  Y  L  G  S  F   </first_frame>
            <second_frame>  G  Q  T  Q  P  S  F  L  T  A  A  L  T  T  S  *  S  Q  L  K  C  Y  A  R  R  P  T  Q  T  P  V  F  L  H  G  R  R  R  F  F  C  L  I  F  I  G  F  S  I  I  Y  S  *  *  K  I  L  F  S  S  Q  F  Q  S  A  A  L  Q  *  Q  S  I  S  H  Y  A  N  P  *  C  L  H  S  V  L  R  F  H  L  W  S  D  *  Q  N  P  R  S  K  S  H  S  R  N  G  R :   *  *  N  D  E  G  Y  M  E  N  D  Q  R  Q   : A  N  L  S  L  S  R  V  G  Y  K  V  L  *  F  R  Y  I  E  P  *  C  H  *  *  P  S  Y  C  *  K  C  *  G  N  P  E  :  I  Q  C  C  C  E  M  R  Y  Y  N  T  * :   *  D  Q  S  Q  G  I  W  A  E  V  Y  V  E  K  S  Q  W  H  N  Q  K  H  F  K  R :   Y  C  F  P  G  A  Y  T  M  H  E  H  S  Q  D  C  S  W :   L  E  E  T  H  L  Y  W  *  A  C  F  W  *  S  V  S  C  H  R  C  N  Y  *  W  A  R  K  A  Q  N  G  F  C :   A  G  K  W  G  I  P  Y  G  A  G  C  L  *  F  *  R  S  G  Y  C  T  C  H  V  Q  C  R  P   : V  N  S  S  I  C  *  I  I  N  V  N  G  I  F  K  E  M  A  S  L  L  E  Y  K  K  H  N  F  K  E  I  R  W  K  :  V  *  G  H  F  S  R  G  I  R  R  E  V  E  A  T  V  *  G  T  L  N  M  :  V  *  A  *  T  D  R  *  H  G  R  L  C  V  K  K  R  G  W  I  C  L  G  M  Q  E  L  *  W  R  C  P  E  *  S  A  R  S  R :   I  W  F  S  G  P  H  D  F  C  I   : V  I  F  *  W  Q  D  I  R  S  *  S  S  S  R  H  C  N  K  T  F  S  A  A  S  K  G  S  R  N  *  Y  K  Q  C  C  F  H  F  C  M  D  K  G  T  W  T  *  :  G  S  A  *  W  E  S  K  V  V  G  I  C  S  H  P  *  S  F  L  H  W  D  N  R  V  R  E  D  D  *  G  L  S  Y  I  S  S  R  T  Q  :  G  V  K  R  I  L  L  E  H  *  R  I  Y  *  C  C  S  T  E  T  S  R  E  A  S  C  L  G  A  Y  L  S  C  T  G  L  C  S  E  N  I  H  V  *  A  E  E  D  H  E  Q  H  P  F  T  V  N  I  T  L  L  T  L  P  V  E  T  F  F  T  L  V  F  V  V  V  Q  V  Q  D  N  R  L  L  S  G  P  F  I  L  I  F  N  G  L  C  I  L  L  S  R  F  I  *  D  P  S  </second_frame>
            <third_frame>   D  K  H  N  R  V  F  S  Q  R  H  *  Q  L  L  K  A  N  *  S  V  M  L  A  V  R  P  R  L  R  C  S  S  M  A  G  V  A  S  F  V  S  S  S  S  A  S  A  S  S  I  A  S  K  K  F  Y  F  Q  V  N  S  N  R  Q  L  F  N  N  R  V  S  L  T  T  R  I  P  N  A  S  I  R  C  F  A  S  T  S  G  P  T  S  K  I  L  V  Q  N  P  I  V  E  M  D   : G  D  E  M  T  R  V  I  W  K  M  I  K  D  K  :  L  I  Y  P  Y  L  E  L  D  T  K  Y  Y  D  L  G  I  L  N  R  D  A  T  D  D  Q  V  T  V  E  S  A  E  A  T  L  K :   Y  N  V  A  V  K  C  A  T  I  T  P   : D  E  T  R  V  K  E  F  G  L  K  S  M  W  K  S  P  N  G  T  I  R  N  I  L  N   : G  T  V  F  R  E  P  I  L  C  T  N  I  P  R  I  V  P   : G  W  K  K  P  I  C  I  G  R  H  A  F  G  D  Q  Y  R  A  T  D  A  I  I  N  G  P  G  K  L  K  M  V  F   : V  P  E  N  G  E  S  P  T  E  L  D  V  Y  D  F  K  G  P  G  I  A  L  A  M  Y  N  V  D  Q  :  S  I  R  A  F  A  E  S  S  M  S  M  A  F  S  K  K  W  P  L  Y  L  S  T  K  N  T  I  L  K  K  Y  D  G  R :   F  K  D  I  F  Q  E  V  Y  E  E  K  W  K  Q  Q  F  E  E  H  S  I  W :   Y  E  H  R  L  I  D  D  M  V  A  Y  V  L  K  S  E  G  G  Y  V  W  A  C  K  N  Y  D  G  D  V  Q  S  D  L  L  A  Q   : G  F  G  S  L  G  L  M  T  S  V  L  :  L  S  S  D  G  K  T  L  E  A  E  A  A  H  G  T  V  T  R  H  F  R  L  H  Q  K  G  Q  E  T  S  T  N  S  V  A  S  I  F  A  W  T  R  G  L  G  H  R :   A  Q  L  D  G  N  Q  K  L  L  E  F  V  H  T  L  E  A  S  C  I  G  T  I  E  S  G  K  M  T  K  D  L  A  I  L  A  H  G  P  K :   V  S  R  E  F  Y  L  N  T  E  E  F  I  D  A  V  A  Q  K  L  Q  E  K  L  H  A  S  A  P  I  *  V  V  L  D  Y  V  V  R  T  Y  M  Y  E  L  K  K  I  M  S  S  I  L  S  L  L  T  *  L  Y  S  H  C  P  L  R  H  S  L  L  *  F  L  *  L  F  R  Y  K  I  T  G  C  *  V  V  P  S  Y  *  S  S  M  G  C  V  Y  Y  C  L  V  L  F  R  I  L  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0123B22.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="194966" stop="194708"/>
                    <exon start="194630" stop="194587"/>
                    <exon start="194481" stop="194372"/>
                    <exon start="194070" stop="194033"/>
                    <exon start="193558" stop="193481"/>
                    <exon start="192951" stop="192898"/>
                    <exon start="192818" stop="192717"/>
                    <exon start="192611" stop="192523"/>
                    <exon start="192421" stop="192318"/>
                    <exon start="192175" stop="192107"/>
                    <exon start="192015" stop="191900"/>
                    <exon start="191758" stop="191724"/>
                    <exon start="191641" stop="191499"/>
                    <exon start="190582" stop="190460"/>
                    <exon start="190008" stop="189915"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1455</number_coding_nucleotides>
                  <number_encoded_amino_acids>485</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SVMLAVRPRLRCSSMAGVASFVSSSSASASSIASKKFYFQVNSNRQLFNNRVSLTTRIPNASIRCFASTSGPTSKILVQNPIVEMDGDEMTRVIWKMIKDKLIYPYLELDTKYYDLGILNRDATDDQVTVESAEATLKYNVAVKCATITPDETRVKEFGLKSMWKSPNGTIRNILNGTVFREPILCTNIPRIVPGWKKPICIGRHAFGDQYRATDAIINGPGKLKMVFVPENGESPTELDVYDFKGPGIALAMYNVDQSIRAFAESSMSMAFSKKWPLYLSTKNTILKKYDGRFKDIFQEVYEEKWKQQFEEHSIWYEHRLIDDMVAYVLKSEGGYVWACKNYDGDVQSDLLAQGFGSLGLMTSVLLSSDGKTLEAEAAHGTVTRHFRLHQKGQETSTNSVASIFAWTRGLGHRAQLDGNQKLLEFVHTLEASCIGTIESGKMTKDLAILAHGPKVSREFYLNTEEFIDAVAQKLQEKLHASAPI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="199774" PGL_stop="202521"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="199774" e_stop="199787"/>
            <exon e_start="199875" e_stop="200045"/>
            <exon e_start="200479" e_stop="200604"/>
            <exon e_start="200685" e_stop="200730"/>
            <exon e_start="200830" e_stop="200846"/>
            <exon e_start="200982" e_stop="201101"/>
            <exon e_start="201504" e_stop="201641"/>
            <exon e_start="201758" e_stop="201920"/>
            <exon e_start="202464" e_stop="202521"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="0.929"/>
          <exon-intron don_prob="0.963" acc_prob="0.898" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.477" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.944" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.983" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.929">
            <gDNA_exon_boundary e_start="199774" e_stop="199787" e_length="14"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="199788" i_stop="199874" i_length="87"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="199875" e_stop="200045" e_length="171"/>
          </exon>
          <intron i_serial="2" don_prob="0.963" acc_prob="0.898">
            <gDNA_intron_boundary i_start="200046" i_stop="200478" i_length="433"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="200479" e_stop="200604" e_length="126"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.998">
            <gDNA_intron_boundary i_start="200605" i_stop="200684" i_length="80"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="200685" e_stop="200730" e_length="46"/>
          </exon>
          <intron i_serial="4" don_prob="0.477" acc_prob="0.000">
            <gDNA_intron_boundary i_start="200731" i_stop="200829" i_length="99"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="200830" e_stop="200846" e_length="17"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.944">
            <gDNA_intron_boundary i_start="200847" i_stop="200981" i_length="135"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="200982" e_stop="201101" e_length="120"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.984">
            <gDNA_intron_boundary i_start="201102" i_stop="201503" i_length="402"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="201504" e_stop="201641" e_length="138"/>
          </exon>
          <intron i_serial="7" don_prob="0.988" acc_prob="0.987">
            <gDNA_intron_boundary i_start="201642" i_stop="201757" i_length="116"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="201758" e_stop="201920" e_length="163"/>
          </exon>
          <intron i_serial="8" don_prob="0.956" acc_prob="0.983">
            <gDNA_intron_boundary i_start="201921" i_stop="202463" i_length="543"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="202464" e_stop="202521" e_length="58"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="199774" stop="199787"/>
              <exon start="199875" stop="200045"/>
              <exon start="200479" stop="200604"/>
              <exon start="200685" stop="200730"/>
              <exon start="200830" stop="200846"/>
              <exon start="200982" stop="201101"/>
              <exon start="201504" stop="201641"/>
              <exon start="201758" stop="201920"/>
              <exon start="202464" stop="202521"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U603640" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCACGAGGTGCAG : GTAATGGCAAGTGTGCTTTCATCTGACGGGAAACAAGATCCAGATATATTGGCAGCTAATGCATCATCTGCTGCTCTAATGTTGTCAGATATTCCTTGGGGTGGGCCAATTGGAGTAATACGTATTGGAAGGATTTCAGGTCAATTTGTTGTAAATCCAAGCATGGAGGAG : CTTAGCATCAGTGATCTTAACTTGGTATATGCATGTACGAGGGATAAAACTTTGATGATAGATGTCCAAGCTCGTGAAATATCTGAAAAGGATTTGGAAGCTGCTTTGAGACTTGCTCATCCAGAG : GCTGTTAAGTATCTTGACCCTCAAATTAGACTCGCAGCTAAAGCTG : ACCCTACTTATGGAAAG : TTCGAGCGTGGAGAAGCTTTGGAAAAAATCACACAGGACGTTAAAAGAGCTCTTGAGGAAGAAGGTGATGAGGAAGGCCTAAAAATTCTACCAAAGACAGTTGATACAGTAAGGAAACAG : GTTGTTCGCAGAAGGATCATTTCTGAAGGGCTTAGAGTGGACGGAAGGTGTCTTGATGAAGTTAGGCCTTTGTACTGTGAAGCTGGTAATTTACCTGTATTACATGGATCTGCAATTTTTTCAAGAGGGGATACTCAG : GTCCTTTGCACTGTTACCCTTGGAGCACCTGGGGATGCTCAACGTCTGGATTCCCTGGTCGGTCCTTCAAGCAAGCGTTTCATGCTGCATTATAGCTTTCCACCGTTTTGTACAAATGAAGTTGGCAAACGAACTGGCCTGAATAGGCGTGAAGTTGGTCATG : GCACTCTTGCTGAAAAGGCTCTGCTTGCTGTATTACCCCCGGAAGATGATTTTCCATA</gDNA_template>
            <first_frame> T  T  R  C  R :   *  W  Q  V  C  F  H  L  T  G  N  K  I  Q  I  Y  W  Q  L  M  H  H  L  L  L  *  C  C  Q  I  F  L  G  V  G  Q  L  E  *  Y  V  L  E  G  F  Q  V  N  L  L  *  I  Q  A  W  R  S :   L  A  S  V  I  L  T  W  Y  M  H  V  R  G  I  K  L  *  *  *  M  S  K  L  V  K  Y  L  K  R  I  W  K  L  L  *  D  L  L  I  Q  R :   L  L  S  I  L  T  L  K  L  D  S  Q  L  K  L  :  T  L  L  M  E  S :   S  S  V  E  K  L  W  K  K  S  H  R  T  L  K  E  L  L  R  K  K  V  M  R  K  A  *  K  F  Y  Q  R  Q  L  I  Q  *  G  N  R :   L  F  A  E  G  S  F  L  K  G  L  E  W  T  E  G  V  L  M  K  L  G  L  C  T  V  K  L  V  I  Y  L  Y  Y  M  D  L  Q  F  F  Q  E  G  I  L  R :   S  F  A  L  L  P  L  E  H  L  G  M  L  N  V  W  I  P  W  S  V  L  Q  A  S  V  S  C  C  I  I  A  F  H  R  F  V  Q  M  K  L  A  N  E  L  A  *  I  G  V  K  L  V  M  :  A  L  L  L  K  R  L  C  L  L  Y  Y  P  R  K  M  I  F  H  </first_frame>
            <second_frame>  P  R  G  A   : G  N  G  K  C  A  F  I  *  R  E  T  R  S  R  Y  I  G  S  *  C  I  I  C  C  S  N  V  V  R  Y  S  L  G  W  A  N  W  S  N  T  Y  W  K  D  F  R  S  I  C  C  K  S  K  H  G  G   : A  *  H  Q  *  S  *  L  G  I  C  M  Y  E  G  *  N  F  D  D  R  C  P  S  S  *  N  I  *  K  G  F  G  S  C  F  E  T  C  S  S  R   : G  C  *  V  S  *  P  S  N  *  T  R  S  *  S  * :   P  Y  L  W  K   : V  R  A  W  R  S  F  G  K  N  H  T  G  R  *  K  S  S  *  G  R  R  *  *  G  R  P  K  N  S  T  K  D  S  *  Y  S  K  E  T   : G  C  S  Q  K  D  H  F  *  R  A  *  S  G  R  K  V  S  *  *  S  *  A  F  V  L  *  S  W  *  F  T  C  I  T  W  I  C  N  F  F  K  R  G  Y  S   : G  P  L  H  C  Y  P  W  S  T  W  G  C  S  T  S  G  F  P  G  R  S  F  K  Q  A  F  H  A  A  L  *  L  S  T  V  L  Y  K  *  S  W  Q  T  N  W  P  E  *  A  *  S  W  S  W :   H  S  C  *  K  G  S  A  C  C  I  T  P  G  R  *  F  S  I </second_frame>
            <third_frame>   H  E  V  Q  :  V  M  A  S  V  L  S  S  D  G  K  Q  D  P  D  I  L  A  A  N  A  S  S  A  A  L  M  L  S  D  I  P  W  G  G  P  I  G  V  I  R  I  G  R  I  S  G  Q  F  V  V  N  P  S  M  E  E  :  L  S  I  S  D  L  N  L  V  Y  A  C  T  R  D  K  T  L  M  I  D  V  Q  A  R  E  I  S  E  K  D  L  E  A  A  L  R  L  A  H  P  E  :  A  V  K  Y  L  D  P  Q  I  R  L  A  A  K  A   : D  P  T  Y  G  K  :  F  E  R  G  E  A  L  E  K  I  T  Q  D  V  K  R  A  L  E  E  E  G  D  E  E  G  L  K  I  L  P  K  T  V  D  T  V  R  K  Q  :  V  V  R  R  R  I  I  S  E  G  L  R  V  D  G  R  C  L  D  E  V  R  P  L  Y  C  E  A  G  N  L  P  V  L  H  G  S  A  I  F  S  R  G  D  T  Q  :  V  L  C  T  V  T  L  G  A  P  G  D  A  Q  R  L  D  S  L  V  G  P  S  S  K  R  F  M  L  H  Y  S  F  P  P  F  C  T  N  E  V  G  K  R  T  G  L  N  R  R  E  V  G  H   : G  T  L  A  E  K  A  L  L  A  V  L  P  P  E  D  D  F  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLe0123B22.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="199776" stop="199787"/>
                    <exon start="199875" stop="200045"/>
                    <exon start="200479" stop="200604"/>
                    <exon start="200685" stop="200730"/>
                    <exon start="200830" stop="200846"/>
                    <exon start="200982" stop="201101"/>
                    <exon start="201504" stop="201641"/>
                    <exon start="201758" stop="201920"/>
                    <exon start="202464" stop="202519"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>849</number_coding_nucleotides>
                  <number_encoded_amino_acids>283</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HEVQVMASVLSSDGKQDPDILAANASSAALMLSDIPWGGPIGVIRIGRISGQFVVNPSMEELSISDLNLVYACTRDKTLMIDVQAREISEKDLEAALRLAHPEAVKYLDPQIRLAAKADPTYGKFERGEALEKITQDVKRALEEEGDEEGLKILPKTVDTVRKQVVRRRIISEGLRVDGRCLDEVRPLYCEAGNLPVLHGSAIFSRGDTQVLCTVTLGAPGDAQRLDSLVGPSSKRFMLHYSFPPFCTNEVGKRTGLNRREVGHGTLAEKALLAVLPPEDDFP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 116 chains have been computed
$ 
$ memory statistics:
$ 70376 bytes spliced alignments in total
$ 15 spliced alignments have been stored
$ 4691 bytes was the average size of a spliced alignment
$ 20712 bytes predicted gene locations in total
$ 12 predicted gene locations have been stored
$ 1726 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 134 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 11:33:15
-->
