<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 11:28:08"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/GenomeThreader_SGN_markers/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="TG583-F" ref_strand="+" ref_description="TG583-F">
      <seq>gggagacagcttgcatgcctgcagcagatgccttctttgcagcaccttgcgatacatccagttccagaaggataaaggtggtgcagttggggagaaattcgagtccatcaactcataatcaaatagcatttctcaaaggaattacgttcttggtgtcacagaagcagaacatttttcttacaaagtacaaaattgattccttttcaacttgctctagagaaaaatgcatttgacaacggactagcagaagcagctgaaaagatgcatatatactgaccacacccctacgcagtaatatcctaataaagattgttattgttgtaacaatttgctctccagctatgacttccgagtgcctgccactgttacttttttttttttttttgggggaaagaaggtttcctttagggggggaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02SLm0020N19.2" temp_strand="+" temp_description="C02SLm0020N19.2  AC215474.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0020N19 sequenced_by:kribb upload_account_name:korea">
        <position start="40147" stop="41153"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40432" g_stop="40853" g_length="422"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="421" r_length="421" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020N19.2" gen_strand="+" ref_id="TG583-F" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>422</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020N19.2" gen_strand="+"/>
        <rDNA rDNA_id="TG583-F" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40432" e_stop="40853"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATACAACAGCAGATCCTGCAGCAGATGCCTTCTTTGCAAGCACCTTGCGATACATCCAGTTCCAGAAGGATAAAGGTGGTGCAGTTGGGGAGAAATTCGAGTCCATCAACTCATAATCAAATAGCATTTCTCAAAGGAATTACGTTCTTGGTGTCACAGAAGCAGCACATTTTTCTTACAAAGTACAAAATTGATTCCTTTTCAACTTGCTCTAGAGAAAAATGCATTTGACAACGGACTAGCAGAAGCAGCTGAAAAGATGCATATATACTGACCACACCCCTACGCAGTAATATCCTAATAAAGATTGTTATTGTTGTAACAATTTGCTCTCCAGCTATGACTTCCGAGTGCCTGCCACTGTTACTTTTTTTTTTTTTTTTGGTGGAGAGTAGGTTTTCTTTTGAGGTGGAAGAGAC</genome_strand>
        <mrna_strand>GGGAGACAGCTTGCATGCCTGCAGCAGATGCCTTCTTTGCA-GCACCTTGCGATACATCCAGTTCCAGAAGGATAAAGGTGGTGCAGTTGGGGAGAAATTCGAGTCCATCAACTCATAATCAAATAGCATTTCTCAAAGGAATTACGTTCTTGGTGTCACAGAAGCAGAACATTTTTCTTACAAAGTACAAAATTGATTCCTTTTCAACTTGCTCTAGAGAAAAATGCATTTGACAACGGACTAGCAGAAGCAGCTGAAAAGATGCATATATACTGACCACACCCCTACGCAGTAATATCCTAATAAAGATTGTTATTGTTGTAACAATTTGCTCTCCAGCTATGACTTCCGAGTGCCTGCCACTGTTACTTTTTTTTTTTTTTTTGGGGGAAAGAAGGTTTCCTTTAGGGGGGGAAAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="TG582-R" ref_strand="+" ref_description="TG582-R">
      <seq>ggagacagcttgcatgcctgcagcagatgccttctttgcagcaccttgcgatacatccagttccagaaggataaaggtggtgcagttggggagaaattcgagtccatcaactcataatcaaatagcatttctcaaaggaattacgttcttggtgtcacagaagcagaacatttttcttacaaagtacaaaattgattccttttcaacttgctctagagaaaaatgcatttgacaacggactagcagaagcagctgaaaagatgcatatatactgaccacacccctacgcagtaatatcctaataaagattgttattgttgtaacaatttgctctccagctatgacttccgagtgcctgccactgttacttttttttttttttttggtggagagtaggttttcttttgaggtggaagagacaaggagtggagaagtagttcattaatttgtagttcagaaatgtgattatgacgagtactagaataatttgtccctcagttttgtataacatgttctgtcccatttaacacatttcgcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02SLm0020N19.2" temp_strand="+" temp_description="C02SLm0020N19.2  AC215474.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0020N19 sequenced_by:kribb upload_account_name:korea">
        <position start="40147" stop="41272"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40433" g_stop="40972" g_length="540"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="539" r_length="539" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020N19.2" gen_strand="+" ref_id="TG582-R" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020N19.2" gen_strand="+"/>
        <rDNA rDNA_id="TG582-R" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40433" e_stop="40972"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATACAACAGCAGATCCTGCAGCAGATGCCTTCTTTGCAAGCACCTTGCGATACATCCAGTTCCAGAAGGATAAAGGTGGTGCAGTTGGGGAGAAATTCGAGTCCATCAACTCATAATCAAATAGCATTTCTCAAAGGAATTACGTTCTTGGTGTCACAGAAGCAGCACATTTTTCTTACAAAGTACAAAATTGATTCCTTTTCAACTTGCTCTAGAGAAAAATGCATTTGACAACGGACTAGCAGAAGCAGCTGAAAAGATGCATATATACTGACCACACCCCTACGCAGTAATATCCTAATAAAGATTGTTATTGTTGTAACAATTTGCTCTCCAGCTATGACTTCCGAGTGCCTGCCACTGTTACTTTTTTTTTTTTTTTTGGTGGAGAGTAGGTTTTCTTTTGAGGTGGAAGAGACAAGGAGTGGAGAAGTAGTTCATTAATTTGTAGTTCAGAAATGTGATTATGACGAGTACTAGAATAATTTGTCCCTCAGTTTTGTATAACATGTTCTGTCCCATTTAACACATTTCGCAG</genome_strand>
        <mrna_strand>GGAGACAGCTTGCATGCCTGCAGCAGATGCCTTCTTTGC-AGCACCTTGCGATACATCCAGTTCCAGAAGGATAAAGGTGGTGCAGTTGGGGAGAAATTCGAGTCCATCAACTCATAATCAAATAGCATTTCTCAAAGGAATTACGTTCTTGGTGTCACAGAAGCAGAACATTTTTCTTACAAAGTACAAAATTGATTCCTTTTCAACTTGCTCTAGAGAAAAATGCATTTGACAACGGACTAGCAGAAGCAGCTGAAAAGATGCATATATACTGACCACACCCCTACGCAGTAATATCCTAATAAAGATTGTTATTGTTGTAACAATTTGCTCTCCAGCTATGACTTCCGAGTGCCTGCCACTGTTACTTTTTTTTTTTTTTTTGGTGGAGAGTAGGTTTTCTTTTGAGGTGGAAGAGACAAGGAGTGGAGAAGTAGTTCATTAATTTGTAGTTCAGAAATGTGATTATGACGAGTACTAGAATAATTTGTCCCTCAGTTTTGTATAACATGTTCTGTCCCATTTAACACATTTCGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="TG582-F" ref_strand="+" ref_description="TG582-F">
      <seq>tacacaccaatattacaactagtaattttcccagatttaaagtagaagatagttttgaagatttgttatactaatatttttcaggtccagtagctcaggatatgtttcattggcaagcaactattattggtccaaatgatagcccttatgctggtggtgttttccaagtcaccatccattttcctcctgattaccctttcaaacctcccaaggtatgttttcaattgatcactttccacaaagggactgctgatattaagttttcatatatatattgacaggtggctttcacgaccatagtttttcatccaaatataaacaataatggaaatatttgtttggacatactgaaggatcaatggagtcctgccctcaccatatccaaggtgctactgctttctagctcttccttttcctcaatgctttactatttcatgaatcaaaagggatacacattagttagtgtttggttgctggctaacataaaaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02SLm0020N19.2" temp_strand="-" temp_description="C02SLm0020N19.2  AC215474.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0020N19 sequenced_by:kribb upload_account_name:korea">
        <position start="42563" stop="41473"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42263" g_stop="41773" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="491" r_length="491" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020N19.2" gen_strand="-" ref_id="TG582-F" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020N19.2" gen_strand="-"/>
        <rDNA rDNA_id="TG582-F" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42263" e_stop="41773"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACACACCAATATTACAACTAGTAATTTTCCCAAATTTAAAGTAGAAGATAGTTTTGAAGATTTGTTATACTAATATTTTTCAGGTCCAGTAGCTCAGGATATGTTTCATTGGCAAGCAACTATTATTGGTCCAAATGATAGCCCTTATGCTGGTGGTGTTTTCCAAGTCACCATCCATTTTCCTCCTGATTACCCTTTCAAACCTCCCAAGGTATGTTTTCAATTGATCACTCTCCACAAAGGGACTGCTGATATTAAGTTTTCATATATATATTGACAGGTGGCTTTCAGGACCAGAGTTTTTCATCCAAATATAAACAATAATGGAAATATTTGTTTGGACATACTGAAGGATCAATGGAGTCCTGCCCTCACCATATCCAAGGTGCTACTGCTTTCTAGCTCTTCCTTTTCCTCAATGATTTACTATTTCATAAATCAAAAGGGATACACATTAGTTAGTGTTTGGTTGCTGGCTAACATAAAAATA</genome_strand>
        <mrna_strand>TACACACCAATATTACAACTAGTAATTTTCCCAGATTTAAAGTAGAAGATAGTTTTGAAGATTTGTTATACTAATATTTTTCAGGTCCAGTAGCTCAGGATATGTTTCATTGGCAAGCAACTATTATTGGTCCAAATGATAGCCCTTATGCTGGTGGTGTTTTCCAAGTCACCATCCATTTTCCTCCTGATTACCCTTTCAAACCTCCCAAGGTATGTTTTCAATTGATCACTTTCCACAAAGGGACTGCTGATATTAAGTTTTCATATATATATTGACAGGTGGCTTTCACGACCATAGTTTTTCATCCAAATATAAACAATAATGGAAATATTTGTTTGGACATACTGAAGGATCAATGGAGTCCTGCCCTCACCATATCCAAGGTGCTACTGCTTTCTAGCTCTTCCTTTTCCTCAATGCTTTACTATTTCATGAATCAAAAGGGATACACATTAGTTAGTGTTTGGTTGCTGGCTAACATAAAAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="TG583-R" ref_strand="+" ref_description="TG583-R">
      <seq>tacacaccaatattacaactagtaattttcccaaatttaaagtagaagatagttttgaagatttgttatactaatatttttcaggtccagtagctcaggatatgtttcattggcaagcaactattattggtccaaatgatagcccttatgctggtggtgttttccaagtcaccatccattttcctcctgattaccctttcaaacctcccaaggtatgttttcaattgatcactttccacaaagggactgctgatattaagttttcatatatatattgacaggtggctttcaggaccagagtttttcatccaaatataaacaataatggaaatatttgtttggacatactgaaggatcaatggagtcctgccctcaccatatccaaggtgctactgctttctagctcttccttttcctcaatgctttactatttcatgaatcaaaagggatacacattacctagtgtttggttgctggctaacataaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02SLm0020N19.2" temp_strand="-" temp_description="C02SLm0020N19.2  AC215474.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0020N19 sequenced_by:kribb upload_account_name:korea">
        <position start="42563" stop="41476"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42263" g_stop="41776" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="488" r_length="488" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020N19.2" gen_strand="-" ref_id="TG583-R" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020N19.2" gen_strand="-"/>
        <rDNA rDNA_id="TG583-R" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42263" e_stop="41776"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACACACCAATATTACAACTAGTAATTTTCCCAAATTTAAAGTAGAAGATAGTTTTGAAGATTTGTTATACTAATATTTTTCAGGTCCAGTAGCTCAGGATATGTTTCATTGGCAAGCAACTATTATTGGTCCAAATGATAGCCCTTATGCTGGTGGTGTTTTCCAAGTCACCATCCATTTTCCTCCTGATTACCCTTTCAAACCTCCCAAGGTATGTTTTCAATTGATCACTCTCCACAAAGGGACTGCTGATATTAAGTTTTCATATATATATTGACAGGTGGCTTTCAGGACCAGAGTTTTTCATCCAAATATAAACAATAATGGAAATATTTGTTTGGACATACTGAAGGATCAATGGAGTCCTGCCCTCACCATATCCAAGGTGCTACTGCTTTCTAGCTCTTCCTTTTCCTCAATGATTTACTATTTCATAAATCAAAAGGGATACACATTAGTTAGTGTTTGGTTGCTGGCTAACATAAAA</genome_strand>
        <mrna_strand>TACACACCAATATTACAACTAGTAATTTTCCCAAATTTAAAGTAGAAGATAGTTTTGAAGATTTGTTATACTAATATTTTTCAGGTCCAGTAGCTCAGGATATGTTTCATTGGCAAGCAACTATTATTGGTCCAAATGATAGCCCTTATGCTGGTGGTGTTTTCCAAGTCACCATCCATTTTCCTCCTGATTACCCTTTCAAACCTCCCAAGGTATGTTTTCAATTGATCACTTTCCACAAAGGGACTGCTGATATTAAGTTTTCATATATATATTGACAGGTGGCTTTCAGGACCAGAGTTTTTCATCCAAATATAAACAATAATGGAAATATTTGTTTGGACATACTGAAGGATCAATGGAGTCCTGCCCTCACCATATCCAAGGTGCTACTGCTTTCTAGCTCTTCCTTTTCCTCAATGCTTTACTATTTCATGAATCAAAAGGGATACACATTACCTAGTGTTTGGTTGCTGGCTAACATAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="TG527-R" ref_strand="+" ref_description="TG527-R">
      <seq>ggagacagcttgcatgcctgcagccatgtcttccacaggggatgccttgatacttgggtgaacgatggacacgtcacttgccccttgtgcagatctatgttgctaccccctaagttgacctctttccgatctaattctctaaatccatccattagttagttttcgatgcttattacaaacttctgctttaactataacagatgcaaaattagtgtttacagacatttcctgtacagatttccatactttttctaataaaaaatctgataaacttattgagacttttgcataagctgtagaacagttacaaagttagtttcctgtacagattgcaatactattgcttatcaaagctctgctttaagctcatgagttttctgagctcttccatttttgtttgtttcttccgtttttgatagagaggtatgatggttaggcttttcttttagtcaaggaaagaatggtggaaaccatcaacttgctgtctatgggcttggttaaataagcatccataccaacctgtaagcattttgcttcatctgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02SLm0020N19.2" temp_strand="+" temp_description="C02SLm0020N19.2  AC215474.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0020N19 sequenced_by:kribb upload_account_name:korea">
        <position start="92577" stop="93705"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92878" g_stop="93405" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="545" r_length="528" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020N19.2" gen_strand="+" ref_id="TG527-R" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020N19.2" gen_strand="+"/>
        <rDNA rDNA_id="TG527-R" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92878" e_stop="93405"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCAGCCATGTCTTCCACAGGGGATGCCTTGATACTTGGGTGAACGATGGACACGTCACTTGCCCCTTGTGCAGATCTATGTTGCTACCCCCTAAGTTGACCTCTTTCCGATCTAATTCTCTAAATCCATCCATTAGTTAGTTTTCGATGCTTATTACAAACTTCTGCTTTAACTATAACAGATGCAAAATTAGTGTTTACAGACATTTCCTGTACAGATTTCCATACTTTTTCTAATAAAAAATCTGATAAACTTATTGAGACTTTTGCATAAGCTATAGAACAGTTACAAAGTTAGTTTCCTGTACAGATTGCAATACTATTGCTTATCAAAGCTCTGCTTTAAGCTCATGAGTTTTCTGAGCTCTTCCATTTTTGTTTGTTTCTTCCGTTTTTGATAGAGAGGTATGATGGTTAGGCTTTTCTTTTAGTCAAGGAAAGAATGGTGGAAACCATCAACTTGCTGTCTATGGGCTTGGTTAAATAAGCATCCATACCAACCTGTAAGCATTTTGCTTCATCTGATG</genome_strand>
        <mrna_strand>CTGCAGCCATGTCTTCCACAGGGGATGCCTTGATACTTGGGTGAACGATGGACACGTCACTTGCCCCTTGTGCAGATCTATGTTGCTACCCCCTAAGTTGACCTCTTTCCGATCTAATTCTCTAAATCCATCCATTAGTTAGTTTTCGATGCTTATTACAAACTTCTGCTTTAACTATAACAGATGCAAAATTAGTGTTTACAGACATTTCCTGTACAGATTTCCATACTTTTTCTAATAAAAAATCTGATAAACTTATTGAGACTTTTGCATAAGCTGTAGAACAGTTACAAAGTTAGTTTCCTGTACAGATTGCAATACTATTGCTTATCAAAGCTCTGCTTTAAGCTCATGAGTTTTCTGAGCTCTTCCATTTTTGTTTGTTTCTTCCGTTTTTGATAGAGAGGTATGATGGTTAGGCTTTTCTTTTAGTCAAGGAAAGAATGGTGGAAACCATCAACTTGCTGTCTATGGGCTTGGTTAAATAAGCATCCATACCAACCTGTAAGCATTTTGCTTCATCTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="TG527-F" ref_strand="+" ref_description="TG527-F">
      <seq>tcttttggtaatgcaccagtagaaggagattcgcatgaatgccttgaaattgatcctaaccactccgatatcgcctgctcggatgattctgacaagtcagataatggaaatgacaaatgcgcaagtgcattcctttctgaaaaaaagagggaagaaaattttgtcaacgcctctctttcacactatgggaccttaaacaactacttcattgacttcaatagcgtagatctggaagaaaatgctcctgacaggactcatctgggacaaactagggatggagaacataatttaacaagcacctccaccaaagaggtcacaaatgcctgctcaaataaggtagcagggcagaaatctctagcaggtttatgtatactgcttgctgaggataccccagttctgcaaagagtcgctaccataatgctggaaaaattgggagctaaagtggtggttgtaggagatggactacaggcagtggaagcactgaaacccgtgcctaattcagatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02SLm0020N19.2" temp_strand="-" temp_description="C02SLm0020N19.2  AC215474.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0020N19 sequenced_by:kribb upload_account_name:korea">
        <position start="94482" stop="93378"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94182" g_stop="93678" g_length="505"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="505" r_length="505" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020N19.2" gen_strand="-" ref_id="TG527-F" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020N19.2" gen_strand="-"/>
        <rDNA rDNA_id="TG527-F" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94182" e_stop="93678"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTTTGTAATGCACCAGTAGAAGGAGATTCGCATGAATGCCTTGAAATTGATCCTAACCACTCCGATATCGCCTGCTCGGATGATTCTGACAAGTCAGATAATGGAAATGACAAATGCGCAAGTGCATTCCTTCCTGAAAAAAAGAGGGAAGAAAATTTTGTCAACGCCTCTCTTTCACACTATGGGACCTTAAACAACTACTTCATTGACTTCAATAGCGTAGATCTGGAAGAAAATGCTCCTGACAGGACTCATCTGGGACAAACTAGGGATGGAGAACATAATTTAACAAGCACCTCCACCAAAGAGGTCACAAATGCCTGCTCAAATAAGGTAGCAGGGCAGAAATCTCTAGCAGGTTTATGCATACTGCTTGCTGAGGATACCCCAGTTCTGCAAAGAGTCGCTACCATAATGCTGGAAAAATTGGGAGCTAAAGTGGTGGTTGTAGGAGATGGACTACAGGCAGTGGAAGCACTGAAACCTGTGCCTAATTCAGATG</genome_strand>
        <mrna_strand>TCTTTTGGTAATGCACCAGTAGAAGGAGATTCGCATGAATGCCTTGAAATTGATCCTAACCACTCCGATATCGCCTGCTCGGATGATTCTGACAAGTCAGATAATGGAAATGACAAATGCGCAAGTGCATTCCTTTCTGAAAAAAAGAGGGAAGAAAATTTTGTCAACGCCTCTCTTTCACACTATGGGACCTTAAACAACTACTTCATTGACTTCAATAGCGTAGATCTGGAAGAAAATGCTCCTGACAGGACTCATCTGGGACAAACTAGGGATGGAGAACATAATTTAACAAGCACCTCCACCAAAGAGGTCACAAATGCCTGCTCAAATAAGGTAGCAGGGCAGAAATCTCTAGCAGGTTTATGTATACTGCTTGCTGAGGATACCCCAGTTCTGCAAAGAGTCGCTACCATAATGCTGGAAAAATTGGGAGCTAAAGTGGTGGTTGTAGGAGATGGACTACAGGCAGTGGAAGCACTGAAACCCGTGCCTAATTCAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="TG484-R" ref_strand="+" ref_description="TG484-R">
      <seq>acagtttagttgaaggcataattgcatcactgttcctggtccatttttctttacaactttaatctctccacccattttgttaacctgtatatcatcctatcatcatcagaagctgtcaaagcagtcaatatatcttcacttttatgcttaaagccaattccaagggaaacattttaagaaatgatggatagtggaactttgctcagagagttgttgttcatgccatcctttacctagtaaggggcttatgaccacatcaagtcttagaaaatcataaggtagaacctgaaatttatttagagaaaaaaattgaacttaccagggtacgtacaatgcatagtccgaggccagtcccaccatgcctgagtgtgaacataatcaaacgatgagttttttccttcgcaggtactaactagcttttaaggtagtaaattcatgcatgtaatctgttatttaactaaagaagttcacccatatatgagaacgatgtgaaaacttcttacaagcgagtggtaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02SLm0020N19.2" temp_strand="+" temp_description="C02SLm0020N19.2  AC215474.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0020N19 sequenced_by:kribb upload_account_name:korea">
        <position start="94548" stop="95665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94848" g_stop="95365" g_length="518"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="517" r_length="517" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020N19.2" gen_strand="+" ref_id="TG484-R" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020N19.2" gen_strand="+"/>
        <rDNA rDNA_id="TG484-R" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94848" e_stop="95365"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAGTTTAGTTGAAGGCATAATTGCATCACTGTTCCTGGTCCATTTTTCTTTACAACTTTAATCTCTCCACCCATTTTGTTAACCTGTATATCATCCTATCATCATCAGAAGCTGTCAAAGCAGTCAATATATCTTCACTTTTATGCTTAAAGCCAATTCCAAGGGAAACATTTTAAGAAATGATGGATAGTGGAACTTTGCTCAGAGAGTTGTTGTTCATGCCATCCTTTACCTTGTAAGAGGCTTATGACCACATCAAGTCTTAGAAAATCACAAGATAGAACCTGAAATTTATTTAGAGAAAAAAATTGAACTCACCAGGGTACGTACAATGCATAGTCCGAGGCCAGTCCCACCATGCCTGAGTGTGAACATAATCAAACGATGAGTTTTTTTCCTTCCCAGGTACTAACTAGCTTTTAAGGTAGTAAATTCATGCATGTAATCTGTTATTTAACTAAAGAAGTTCACCCATATATGAGAACGATGTGAAAACTTCTTACAAGCGAGTGGTAGA</genome_strand>
        <mrna_strand>ACAGTTTAGTTGAAGGCATAATTGCATCACTGTTCCTGGTCCATTTTTCTTTACAACTTTAATCTCTCCACCCATTTTGTTAACCTGTATATCATCCTATCATCATCAGAAGCTGTCAAAGCAGTCAATATATCTTCACTTTTATGCTTAAAGCCAATTCCAAGGGAAACATTTTAAGAAATGATGGATAGTGGAACTTTGCTCAGAGAGTTGTTGTTCATGCCATCCTTTACCTAGTAAGGGGCTTATGACCACATCAAGTCTTAGAAAATCATAAGGTAGAACCTGAAATTTATTTAGAGAAAAAAATTGAACTTACCAGGGTACGTACAATGCATAGTCCGAGGCCAGTCCCACCATGCCTGAGTGTGAACATAATCAAACGATGAG-TTTTTTCCTTCGCAGGTACTAACTAGCTTTTAAGGTAGTAAATTCATGCATGTAATCTGTTATTTAACTAAAGAAGTTCACCCATATATGAGAACGATGTGAAAACTTCTTACAAGCGAGTGGTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="TG484-F" ref_strand="+" ref_description="TG484-F">
      <seq>ttattggcttgctggacattcttataagtgatggttttcttacaaatgaacagtatgcaactattactcagattcgtaaatgctcaactgccttgcttcggcttctaaacaacattttggatctcagcaaggtaagatgcacactaacaactcttatgatgatactattcgaaagagtttactctttgattaactaaggtcaccctactgttcctcggagagattatggcatagatgaaatggtaatagactatttagggtaatgttgcagctagcttaagctcattactcagaagagtgttttgattagacctgagaaaaatcatatattcattgggcaggtagaatctggaaaactagtgttggaagaaacagaatttgacttggctcgagaacttgaaggacttgttgatatgttctctgtccagtgcattaatcacaatgttgagacagttctagatctctctggtacttcattgttctcctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02SLm0020N19.2" temp_strand="-" temp_description="C02SLm0020N19.2  AC215474.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0020N19 sequenced_by:kribb upload_account_name:korea">
        <position start="96840" stop="95753"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96540" g_stop="96053" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="488" r_length="488" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020N19.2" gen_strand="-" ref_id="TG484-F" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020N19.2" gen_strand="-"/>
        <rDNA rDNA_id="TG484-F" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96540" e_stop="96053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTGGCTTGCTGGACATTCTTATAAGTGATGGTTTTCTTACAAATGAACAGTATGCAACTATTACTCAAATTCGTAAATGCTCAACTGCCTTGCTTCGGCTTCTAAACAACATTTTGGATCTCAGTAAGGTAAGATGCACACTAACAACTCTTTTGATGATACTTTTCGAAAGAGTTTACTCTTTGATTAACTAAGGTCACCCTACTGTTCCTCGGAGAGATTATAGCATAGATGAAATGGTAATAGACTATTTAGGGTAATGTTGCAGCTAGCTTAAGCTCATTACTCAAAAGAGTGTTTTAATTAGACCTGAGAAAAATCATATATTCATTGGGCAGGTAGAATCTGGAAAACTAGTGTTGGAAGAAACAGAATTTGACTTGGCTCGAGAACTTGAAGGACTTGTTGATATGTTCTCTGTCCAGTGCATTAATCACAATGTTGAGACAGTTCTAGATCTCTCTGGTACATCATTGTTCTCCTTA</genome_strand>
        <mrna_strand>TTATTGGCTTGCTGGACATTCTTATAAGTGATGGTTTTCTTACAAATGAACAGTATGCAACTATTACTCAGATTCGTAAATGCTCAACTGCCTTGCTTCGGCTTCTAAACAACATTTTGGATCTCAGCAAGGTAAGATGCACACTAACAACTCTTATGATGATACTATTCGAAAGAGTTTACTCTTTGATTAACTAAGGTCACCCTACTGTTCCTCGGAGAGATTATGGCATAGATGAAATGGTAATAGACTATTTAGGGTAATGTTGCAGCTAGCTTAAGCTCATTACTCAGAAGAGTGTTTTGATTAGACCTGAGAAAAATCATATATTCATTGGGCAGGTAGAATCTGGAAAACTAGTGTTGGAAGAAACAGAATTTGACTTGGCTCGAGAACTTGAAGGACTTGTTGATATGTTCTCTGTCCAGTGCATTAATCACAATGTTGAGACAGTTCTAGATCTCTCTGGTACTTCATTGTTCTCCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="TG191-R" ref_strand="+" ref_description="TG191-R">
      <seq>ctcgttctgctgatttgtcgatgcttaatgatctgcaaactttgcacgtaggagttatcatcattccaaggaaatatataatgggaaaggtagatgagagggctatcaagactcttgtaatattgatctcagcatcaatatgcatcctaatcattggatgtgtctgcatcttcgtactaacagatggagtgtcaaaggaaatgaaacttagagcagagctgataagccagttagatgcaagaaggaaagcagaggcatcgagcaattacaaaagccaatttctagcgaacatgaggtgaatattcatcagtcctttgttacttccgctcttctactctacatcttgcctctgcgaaagactcattctcagtttaaatttttagtttctcaaatgtacatttctacagttacttcatgctatgttttttcacagtcatgaattacgaacacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02SLm0020N19.2" temp_strand="-" temp_description="C02SLm0020N19.2  AC215474.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0020N19 sequenced_by:kribb upload_account_name:korea">
        <position start="97302" stop="96251"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97002" g_stop="96551" g_length="452"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="452" r_length="452" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020N19.2" gen_strand="-" ref_id="TG191-R" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>452</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020N19.2" gen_strand="-"/>
        <rDNA rDNA_id="TG191-R" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97002" e_stop="96551"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGTTCTGCTGATTTATCGATGCTTAATGATCTGCAAACTTTGCAGGTAGGAGTTATCATCATTCCAAGGAAATATATAATGGGAAAGGTAGATGAGAGGGCTATCAAGACTCTTGTAATATTGATCTCAGCATCAATATGCATCCTAATCATTGGATGTGTCTGCATCTTCGTACTAACAGATGGAGTGTCAAAGGAAATGAAACTTAGAGCAGAGCTGATAAGCCAGTTAGATGCAAGAAGGAAAGCAGAGGCATCGAGCAATTACAAAAGCCAATTTCTAGCGAACATGAGGTGAATATTCATCACTCCTTTGTTACTTCCGCTCTTCTATTCTACATCTTACCTCTGCGAAAGATTCATTCTCAGTTTAAATTTTTAGTTTCTCATATGTACATTTCTACAGTTACTTCATGCTTTGTTTTTTCACAGTCATGAATTACGAACACCT</genome_strand>
        <mrna_strand>CTCGTTCTGCTGATTTGTCGATGCTTAATGATCTGCAAACTTTGCACGTAGGAGTTATCATCATTCCAAGGAAATATATAATGGGAAAGGTAGATGAGAGGGCTATCAAGACTCTTGTAATATTGATCTCAGCATCAATATGCATCCTAATCATTGGATGTGTCTGCATCTTCGTACTAACAGATGGAGTGTCAAAGGAAATGAAACTTAGAGCAGAGCTGATAAGCCAGTTAGATGCAAGAAGGAAAGCAGAGGCATCGAGCAATTACAAAAGCCAATTTCTAGCGAACATGAGGTGAATATTCATCAGTCCTTTGTTACTTCCGCTCTTCTACTCTACATCTTGCCTCTGCGAAAGACTCATTCTCAGTTTAAATTTTTAGTTTCTCAAATGTACATTTCTACAGTTACTTCATGCTATGTTTTTTCACAGTCATGAATTACGAACACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="TG191-F" ref_strand="+" ref_description="TG191-F">
      <seq>cacttcagtgtcatgattggataatctcgttctgctgatttggcgatgcttaaagatctgcaaactttgctggtaggagttatcatcattccgaggaaatatataatgggaaaggtagatgacagggctatcaagactcttgtactattgatctcatcatcaatatgcatcctaatcattggatgtgtctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02SLm0020N19.2" temp_strand="-" temp_description="C02SLm0020N19.2  AC215474.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0020N19 sequenced_by:kribb upload_account_name:korea">
        <position start="97327" stop="96537"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97027" g_stop="96837" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="191" r_length="191" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020N19.2" gen_strand="-" ref_id="TG191-F" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>191</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020N19.2" gen_strand="-"/>
        <rDNA rDNA_id="TG191-F" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97027" e_stop="96837"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTCAGTATCATGATTGGATAAGCTCGTTCTGCTGATTTATCGATGCTTAATGATCTGCAAACTTTGCAGGTAGGAGTTATCATCATTCCAAGGAAATATATAATGGGAAAGGTAGATGAGAGGGCTATCAAGACTCTTGTAATATTGATCTCAGCATCAATATGCATCCTAATCATTGGATGTGTCTG</genome_strand>
        <mrna_strand>CACTTCAGTGTCATGATTGGATAATCTCGTTCTGCTGATTTGGCGATGCTTAAAGATCTGCAAACTTTGCTGGTAGGAGTTATCATCATTCCGAGGAAATATATAATGGGAAAGGTAGATGACAGGGCTATCAAGACTCTTGTACTATTGATCTCATCATCAATATGCATCCTAATCATTGGATGTGTCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_markers" ref_id="C2_At4g38630" ref_strand="+" ref_description="C2_At4g38630">
      <seq>tacgcgaactatctcttcggattgtgatttttcctcctttaagcagcaactccctccgcaagtaaactcaaattccttccaattttcagagagagacgaaacgatttctcagttcaatcttccaatcattggatttttcttcaatcgttaaccatggtgctcgaggcgacaatgatctgcatcgacaattcggagtggatgcgaaacggtgattactcgcccaataggttccaagctctagcagacgctgttaatctaatctgtggtgccaaaacccagtctaatcccgagaatacagttggaattttgacgatggctggtaaaggggttcgagtgttggtcactccgactagcgatcttggaaaaatcttagcttgtatgcacggattggagataggcggtgagatgaatttggctgctggaatccaggtagcccagttggcattgaagcaccgacaaaacaagaagcagcaacaaaggatcattgtttttgctggcagccctgttaaatatgacaagaaggtcttggagatgattgggagaaagttgaagaagaatagtgtagctcttgatgtggttaattttggtgaagatgatgaagggaaagctgagaagctagaggcactagttgctgcgcttaataccaatgacagtagtcacatcattcatattcctcctggtcctaatgctctctctgatgttctcataagtactcctattttcactggtgatggtgaaggtggcagtggatttgctgctgctgctgcagcggctgctgctggtggagtgtctgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0020N19-UNxiF/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C02SLm0020N19.2" temp_strand="-" temp_description="C02SLm0020N19.2  AC215474.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0020N19 sequenced_by:kribb upload_account_name:korea">
        <position start="127905" stop="124397"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="127600" g_stop="127445" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="165" r_length="152" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="127444" i_stop="127350" i_length="95">
            <donor d_prob="0.948" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="127349" g_stop="127236" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="279" r_length="114" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="127235" i_stop="127111" i_length="125">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="127110" g_stop="127005" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="385" r_length="106" r_score="0.972"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="127004" i_stop="125314" i_length="1691">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="125313" g_stop="125199" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="500" r_length="115" r_score="0.974"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="125198" i_stop="125118" i_length="81">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="125117" g_stop="124908" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="710" r_length="210" r_score="0.995"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="124907" i_stop="124782" i_length="126">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.521" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="124781" g_stop="124697" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="711" r_stop="795" r_length="85" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0020N19.2" gen_strand="-" ref_id="C2_At4g38630" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>786</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0020N19.2" gen_strand="-"/>
        <rDNA rDNA_id="C2_At4g38630" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="127600" e_stop="127445"/>
          <exon e_start="127349" e_stop="127236"/>
          <exon e_start="127110" e_stop="127005"/>
          <exon e_start="125313" e_stop="125199"/>
          <exon e_start="125117" e_stop="124908"/>
          <exon e_start="124781" e_stop="124697"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCGGATTGTGATTTTTCCTCCTTAAAGCACCAACTCCCTCCGCAAGTAAACTCAAATTCCTTCCAATTTATTTTTCAGAGAGAACGAAAAGATTTCTCAGTTTAATCTTCCAATTATTGGATTTTTCTTCAATCGTTAACCATGGTGCTCGAGGTCTGCATAATGTTTATTGATTCCAATTTCAGTTCTATCTCTACAATGTTATAGCGAACTAGGGTTAATTTTTGTTAACTTTTTTTTTTAATCAGGCGACAATGATCTGCATCGACAATTCGGAGTGGATGAGAAACGGTGATTACTCGCCCAATAGGTTCCAAGCTCTAGCAGACGCTGTTAATCTAATCTGTGGTGCCAAAACCCAGGTTTCGATTATATTTCTCAAGTTATATTCTTTCTAGGGTTTATGATATATCTGGGTGTTCTCGTACTTTTAGTGAAAACTAATTGCGCTAAGTTTAACTGTTCCTTTTTTTTGTGTGTGATCCAGTCTAATCCCGAGAATACAGTTGGAATTTTGACGATGGCTGGTAAAGGGGTTCGAGTGTTAGTCACTCCGACCAGCGATCTTGGAAAAATTTTAGCTTGTATGCACGGTAAGCTCTGTTCCTTGTTTTTTACGCTTTTTTAAAGGCATTTATTACAACTTATCTAGCCCAGAGCTTTCGTTACCTTGACATGGAATATATTGGGGCGCTAGGTTTATTAAGGTACCTGGAAAAGAGTAGACATGTGGAGATGAGTTTTGTATTTAGAAGTATCTTAAAGAGCTCAGTTTCCTCGGACTTTGTTTTGGGTGTAATGCATCATATATAGAAGAGGTGTGACTAGACAGATTATGATATCTATCATTAGAGGTGCTAGAGTACCTGTCATTGCATGTTTAACTACTTCTTGCCTTACTCCATGGGTTGTTACACTTGTCTTGTTAGTGACTTAATGTCATCTTCTTACTGTGCCTAATCACTTGTTCTATGCCTTTTCAGAAGGATAATATTGTATGTAAGGAGTATGATAGGCACACCAACAACAACATACACACTGGGGTTTTAAGAGGGTGTAGGTGGGGGTACACATACCTTATCCTTTCCTTCGGGGAGTTAGAGAGGCTGTTTCCAATTAGAACCTCTACCAAGAAAAATATTTTCAAAACAGGTCAAGAGCAAAAGGCTATGATGAAAATATGAAGAAGAGAAGTATTGACATCAAAATAGTATTGATAACAAAGTAAAAGGAACAACAATAACAATAAAATTTAGGTATATGATAAAAATAGCACACTAGTAGTGATTGATAAGGGGGATAAAGTGCTCTAAAGTAGAGTCAAGCCCTCCCATAGAATAGAGAGAAAATGTTCAACTACCTACTGGCCTTCTACCCTAATCCTTGACCTCCATGCTCTCTGGTCTAGAGCAATGTATCGAGGAAGTTCAATTAGTTGACTTCATAGGATTACTGTAATTGGCCTCTCTTAAGTTCAAATTTTTGGAGGTGACCAGCATGCCGAGGAATGCTAAGTTACCAGTTCAAATAACAAAAAGAATTTCAAAAAGGTGTCTTATGCTTAAGCTTAAATTCTGGAGTATTTACATGTAGAGTTGAAGCCACTTTGTAATTTCAAAGAAATTCCAGATGCATAGAGCCTGAGGAGAAAAGATGTCTGGAAAGAAAAAAAAGGGGGCGAGGGAGAATGATATGCCAATTATCTGTTAAGTGTATAGAGTAGCAAAATAGGAGTCAAGATTGGGGGCTAGGTAGGAAGTGAACTGCATAATTACATTATCTTGTGAATTGTTCTCCAGATGTTTGCACAAAAGGATACGTATGTATTATTGCTTTGATTTTCACTATAAAATCATCAAGAAAATCAGGAGAATGGTCCCAACTCCCATCAGTACTTTTGGTGTGTATTCATGGAACGATATTGTGCTATGTTTTGATGGTCTACTCCAAACCACTCGTTGAAAGCTAGGTGCCTATTGGGTCTATTTAGCTGGAGCAAACTGTCCCTTGTAAATAACACTGATCTTATATAGATTTTGGGAGCTTCCAGTCTTGGCTTAATCCCCATATTATGGAGCTATCTGAATCACTTTTGTACTCCTATATCTTCTCGATGCCATCAATGGATATATTTTTTTCATCAAAAAGGTGGTTCCGAAGTCCTTGTGGTGCTTGAGTTCTATATTACTGCATGACAGTAGTATCTCTTAGTGTCTTGGGCTGTTCAATGAACTCTTGTATTAACTCTTTAGTTGCTGATTTGGCCTTGTCTTCCCTCATTCAGGATTGGAGATAGGCGGTGAGATGAATTTGGCTGCTGGAATCCAGGTAGCCCAGTTGGCTTTGAAGCACCGACAAAACAAGAAGCAACAACAAAGGATTATTGTTTTTGCTGGCAGGTGATGTTCAGATGCTTTTCTCTGTTTTGTCTTTGCTGCTTTCAACTTTTGATCATTCTATTGACATTTCACTTCTTTCAGCCCTGTTAAATATGACAAGAAGGTCTTGGAGATGATTGGGAGAAAGTTGAAGAAGAATAGTGTAGCTCTTGATGTGGTTAATTTTGGTGAAGATGATGAAGGGAAAGCTGAGAAGCTAGAGGCACTAGTTGCTGCGCTTAATACCAACGACAGTAGTCACATCATTCATATTCCTCCTGGTCCTAATGCTCTCTCTGATGTTCTCATAAGGTGATCCCTGATATAACCATCTTCTTATCCTACCATTTTGTTATCATTACTAAATAAGATTTTTTCTGCCTGTACTTGTGAAAAGCAATTCCTTAATAAGTTGTATCCCTCATCTGTCATCGGCAGTACTCCTATTTTCACTGGTGATGGAGAAGGTGGCAGTGGATTTGCTGCTGCTGCTGCAGCGGCTGCTGCTGGTGGAGTGTCTGGA</genome_strand>
        <mrna_strand>TCTTCGGATTGTGATTTTTCCTCCTTTAAGCAGCAACTCCCTCCGCAAGTAAACTCAAATTCCTTCCAA--T-TTTCAGAGAGAG-ACGAAACGATTTCTCAGTTCAATCTTCCAATCATTGGATTTTTCTTCAATCGTTAACCATGGTGCTCGAG...............................................................................................GCGACAATGATCTGCATCGACAATTCGGAGTGGATGCGAAACGGTGATTACTCGCCCAATAGGTTCCAAGCTCTAGCAGACGCTGTTAATCTAATCTGTGGTGCCAAAACCCAG.............................................................................................................................TCTAATCCCGAGAATACAGTTGGAATTTTGACGATGGCTGGTAAAGGGGTTCGAGTGTTGGTCACTCCGACTAGCGATCTTGGAAAAATCTTAGCTTGTATGCACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGGAGATAGGCGGTGAGATGAATTTGGCTGCTGGAATCCAGGTAGCCCAGTTGGCATTGAAGCACCGACAAAACAAGAAGCAGCAACAAAGGATCATTGTTTTTGCTGGCAG.................................................................................CCCTGTTAAATATGACAAGAAGGTCTTGGAGATGATTGGGAGAAAGTTGAAGAAGAATAGTGTAGCTCTTGATGTGGTTAATTTTGGTGAAGATGATGAAGGGAAAGCTGAGAAGCTAGAGGCACTAGTTGCTGCGCTTAATACCAATGACAGTAGTCACATCATTCATATTCCTCCTGGTCCTAATGCTCTCTCTGATGTTCTCATAAG..............................................................................................................................TACTCCTATTTTCACTGGTGATGGTGAAGGTGGCAGTGGATTTGCTGCTGCTGCTGCAGCGGCTGCTGCTGGTGGAGTGTCTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>11</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="40432" PGL_stop="40972"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40432" e_stop="40972"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.976">
            <gDNA_exon_boundary e_start="40432" e_stop="40972" e_length="541"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40432" stop="40853"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="TG583-F" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40433" stop="40972"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="TG582-R" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAATACAACAGCAGATCCTGCAGCAGATGCCTTCTTTGCAAGCACCTTGCGATACATCCAGTTCCAGAAGGATAAAGGTGGTGCAGTTGGGGAGAAATTCGAGTCCATCAACTCATAATCAAATAGCATTTCTCAAAGGAATTACGTTCTTGGTGTCACAGAAGCAGCACATTTTTCTTACAAAGTACAAAATTGATTCCTTTTCAACTTGCTCTAGAGAAAAATGCATTTGACAACGGACTAGCAGAAGCAGCTGAAAAGATGCATATATACTGACCACACCCCTACGCAGTAATATCCTAATAAAGATTGTTATTGTTGTAACAATTTGCTCTCCAGCTATGACTTCCGAGTGCCTGCCACTGTTACTTTTTTTTTTTTTTTTGGTGGAGAGTAGGTTTTCTTTTGAGGTGGAAGAGACAAGGAGTGGAGAAGTAGTTCATTAATTTGTAGTTCAGAAATGTGATTATGACGAGTACTAGAATAATTTGTCCCTCAGTTTTGTATAACATGTTCTGTCCCATTTAACACATTTCGCAG</gDNA_template>
            <first_frame> K  I  Q  Q  Q  I  L  Q  Q  M  P  S  L  Q  A  P  C  D  T  S  S  S  R  R  I  K  V  V  Q  L  G  R  N  S  S  P  S  T  H  N  Q  I  A  F  L  K  G  I  T  F  L  V  S  Q  K  Q  H  I  F  L  T  K  Y  K  I  D  S  F  S  T  C  S  R  E  K  C  I  *  Q  R  T  S  R  S  S  *  K  D  A  Y  I  L  T  T  P  L  R  S  N  I  L  I  K  I  V  I  V  V  T  I  C  S  P  A  M  T  S  E  C  L  P  L  L  L  F  F  F  F  L  V  E  S  R  F  S  F  E  V  E  E  T  R  S  G  E  V  V  H  *  F  V  V  Q  K  C  D  Y  D  E  Y  *  N  N  L  S  L  S  F  V  *  H  V  L  S  H  L  T  H  F  A  </first_frame>
            <second_frame>  K  Y  N  S  R  S  C  S  R  C  L  L  C  K  H  L  A  I  H  P  V  P  E  G  *  R  W  C  S  W  G  E  I  R  V  H  Q  L  I  I  K  *  H  F  S  K  E  L  R  S  W  C  H  R  S  S  T  F  F  L  Q  S  T  K  L  I  P  F  Q  L  A  L  E  K  N  A  F  D  N  G  L  A  E  A  A  E  K  M  H  I  Y  *  P  H  P  Y  A  V  I  S  *  *  R  L  L  L  L  *  Q  F  A  L  Q  L  *  L  P  S  A  C  H  C  Y  F  F  F  F  F  W  W  R  V  G  F  L  L  R  W  K  R  Q  G  V  E  K  *  F  I  N  L  *  F  R  N  V  I  M  T  S  T  R  I  I  C  P  S  V  L  Y  N  M  F  C  P  I  *  H  I  S  Q </second_frame>
            <third_frame>   N  T  T  A  D  P  A  A  D  A  F  F  A  S  T  L  R  Y  I  Q  F  Q  K  D  K  G  G  A  V  G  E  K  F  E  S  I  N  S  *  S  N  S  I  S  Q  R  N  Y  V  L  G  V  T  E  A  A  H  F  S  Y  K  V  Q  N  *  F  L  F  N  L  L  *  R  K  M  H  L  T  T  D  *  Q  K  Q  L  K  R  C  I  Y  T  D  H  T  P  T  Q  *  Y  P  N  K  D  C  Y  C  C  N  N  L  L  S  S  Y  D  F  R  V  P  A  T  V  T  F  F  F  F  F  G  G  E  *  V  F  F  *  G  G  R  D  K  E  W  R  S  S  S  L  I  C  S  S  E  M  *  L  *  R  V  L  E  *  F  V  P  Q  F  C  I  T  C  S  V  P  F  N  T  F  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020N19.2" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40432" stop="40665"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>231</number_coding_nucleotides>
                  <number_encoded_amino_acids>77</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KIQQQILQQMPSLQAPCDTSSSRRIKVVQLGRNSSPSTHNQIAFLKGITFLVSQKQHIFLTKYKIDSFSTCSREKCI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="42263" PGL_stop="41773"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="42263" e_stop="41773"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="42263" e_stop="41773" e_length="491"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42263" stop="41773"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="TG582-F" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42263" stop="41776"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="TG583-R" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TACACACCAATATTACAACTAGTAATTTTCCCAAATTTAAAGTAGAAGATAGTTTTGAAGATTTGTTATACTAATATTTTTCAGGTCCAGTAGCTCAGGATATGTTTCATTGGCAAGCAACTATTATTGGTCCAAATGATAGCCCTTATGCTGGTGGTGTTTTCCAAGTCACCATCCATTTTCCTCCTGATTACCCTTTCAAACCTCCCAAGGTATGTTTTCAATTGATCACTCTCCACAAAGGGACTGCTGATATTAAGTTTTCATATATATATTGACAGGTGGCTTTCAGGACCAGAGTTTTTCATCCAAATATAAACAATAATGGAAATATTTGTTTGGACATACTGAAGGATCAATGGAGTCCTGCCCTCACCATATCCAAGGTGCTACTGCTTTCTAGCTCTTCCTTTTCCTCAATGATTTACTATTTCATAAATCAAAAGGGATACACATTAGTTAGTGTTTGGTTGCTGGCTAACATAAAAATA</gDNA_template>
            <first_frame> Y  T  P  I  L  Q  L  V  I  F  P  N  L  K  *  K  I  V  L  K  I  C  Y  T  N  I  F  Q  V  Q  *  L  R  I  C  F  I  G  K  Q  L  L  L  V  Q  M  I  A  L  M  L  V  V  F  S  K  S  P  S  I  F  L  L  I  T  L  S  N  L  P  R  Y  V  F  N  *  S  L  S  T  K  G  L  L  I  L  S  F  H  I  Y  I  D  R  W  L  S  G  P  E  F  F  I  Q  I  *  T  I  M  E  I  F  V  W  T  Y  *  R  I  N  G  V  L  P  S  P  Y  P  R  C  Y  C  F  L  A  L  P  F  P  Q  *  F  T  I  S  *  I  K  R  D  T  H  *  L  V  F  G  C  W  L  T  *  K   </first_frame>
            <second_frame>  T  H  Q  Y  Y  N  *  *  F  S  Q  I  *  S  R  R  *  F  *  R  F  V  I  L  I  F  F  R  S  S  S  S  G  Y  V  S  L  A  S  N  Y  Y  W  S  K  *  *  P  L  C  W  W  C  F  P  S  H  H  P  F  S  S  *  L  P  F  Q  T  S  Q  G  M  F  S  I  D  H  S  P  Q  R  D  C  *  Y  *  V  F  I  Y  I  L  T  G  G  F  Q  D  Q  S  F  S  S  K  Y  K  Q  *  W  K  Y  L  F  G  H  T  E  G  S  M  E  S  C  P  H  H  I  Q  G  A  T  A  F  *  L  F  L  F  L  N  D  L  L  F  H  K  S  K  G  I  H  I  S  *  C  L  V  A  G  *  H  K  N  </second_frame>
            <third_frame>   H  T  N  I  T  T  S  N  F  P  K  F  K  V  E  D  S  F  E  D  L  L  Y  *  Y  F  S  G  P  V  A  Q  D  M  F  H  W  Q  A  T  I  I  G  P  N  D  S  P  Y  A  G  G  V  F  Q  V  T  I  H  F  P  P  D  Y  P  F  K  P  P  K  V  C  F  Q  L  I  T  L  H  K  G  T  A  D  I  K  F  S  Y  I  Y  *  Q  V  A  F  R  T  R  V  F  H  P  N  I  N  N  N  G  N  I  C  L  D  I  L  K  D  Q  W  S  P  A  L  T  I  S  K  V  L  L  L  S  S  S  S  F  S  S  M  I  Y  Y  F  I  N  Q  K  G  Y  T  L  V  S  V  W  L  L  A  N  I  K  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020N19.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41985" stop="41773"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QVAFRTRVFHPNINNNGNICLDILKDQWSPALTISKVLLLSSSSFSSMIYYFINQKGYTLVSVWLLANIKI</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020N19.2" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42189" stop="41986"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YFSGPVAQDMFHWQATIIGPNDSPYAGGVFQVTIHFPPDYPFKPPKVCFQLITLHKGTADIKFSYIY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="92878" PGL_stop="93405"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92878" e_stop="93405"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="92878" e_stop="93405" e_length="528"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92878" stop="93405"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="TG527-R" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGCAGCCATGTCTTCCACAGGGGATGCCTTGATACTTGGGTGAACGATGGACACGTCACTTGCCCCTTGTGCAGATCTATGTTGCTACCCCCTAAGTTGACCTCTTTCCGATCTAATTCTCTAAATCCATCCATTAGTTAGTTTTCGATGCTTATTACAAACTTCTGCTTTAACTATAACAGATGCAAAATTAGTGTTTACAGACATTTCCTGTACAGATTTCCATACTTTTTCTAATAAAAAATCTGATAAACTTATTGAGACTTTTGCATAAGCTATAGAACAGTTACAAAGTTAGTTTCCTGTACAGATTGCAATACTATTGCTTATCAAAGCTCTGCTTTAAGCTCATGAGTTTTCTGAGCTCTTCCATTTTTGTTTGTTTCTTCCGTTTTTGATAGAGAGGTATGATGGTTAGGCTTTTCTTTTAGTCAAGGAAAGAATGGTGGAAACCATCAACTTGCTGTCTATGGGCTTGGTTAAATAAGCATCCATACCAACCTGTAAGCATTTTGCTTCATCTGATG</gDNA_template>
            <first_frame> L  Q  P  C  L  P  Q  G  M  P  *  Y  L  G  E  R  W  T  R  H  L  P  L  V  Q  I  Y  V  A  T  P  *  V  D  L  F  P  I  *  F  S  K  S  I  H  *  L  V  F  D  A  Y  Y  K  L  L  L  *  L  *  Q  M  Q  N  *  C  L  Q  T  F  P  V  Q  I  S  I  L  F  L  I  K  N  L  I  N  L  L  R  L  L  H  K  L  *  N  S  Y  K  V  S  F  L  Y  R  L  Q  Y  Y  C  L  S  K  L  C  F  K  L  M  S  F  L  S  S  S  I  F  V  C  F  F  R  F  *  *  R  G  M  M  V  R  L  F  F  *  S  R  K  E  W  W  K  P  S  T  C  C  L  W  A  W  L  N  K  H  P  Y  Q  P  V  S  I  L  L  H  L  M </first_frame>
            <second_frame>  C  S  H  V  F  H  R  G  C  L  D  T  W  V  N  D  G  H  V  T  C  P  L  C  R  S  M  L  L  P  P  K  L  T  S  F  R  S  N  S  L  N  P  S  I  S  *  F  S  M  L  I  T  N  F  C  F  N  Y  N  R  C  K  I  S  V  Y  R  H  F  L  Y  R  F  P  Y  F  F  *  *  K  I  *  *  T  Y  *  D  F  C  I  S  Y  R  T  V  T  K  L  V  S  C  T  D  C  N  T  I  A  Y  Q  S  S  A  L  S  S  *  V  F  *  A  L  P  F  L  F  V  S  S  V  F  D  R  E  V  *  W  L  G  F  S  F  S  Q  G  K  N  G  G  N  H  Q  L  A  V  Y  G  L  G  *  I  S  I  H  T  N  L  *  A  F  C  F  I  *   </second_frame>
            <third_frame>   A  A  M  S  S  T  G  D  A  L  I  L  G  *  T  M  D  T  S  L  A  P  C  A  D  L  C  C  Y  P  L  S  *  P  L  S  D  L  I  L  *  I  H  P  L  V  S  F  R  C  L  L  Q  T  S  A  L  T  I  T  D  A  K  L  V  F  T  D  I  S  C  T  D  F  H  T  F  S  N  K  K  S  D  K  L  I  E  T  F  A  *  A  I  E  Q  L  Q  S  *  F  P  V  Q  I  A  I  L  L  L  I  K  A  L  L  *  A  H  E  F  S  E  L  F  H  F  C  L  F  L  P  F  L  I  E  R  Y  D  G  *  A  F  L  L  V  K  E  R  M  V  E  T  I  N  L  L  S  M  G  L  V  K  *  A  S  I  P  T  C  K  H  F  A  S  S  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0020N19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="94182" PGL_stop="93678"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94182" e_stop="93678"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="94182" e_stop="93678" e_length="505"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94182" stop="93678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="TG527-F" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTTTTTGTAATGCACCAGTAGAAGGAGATTCGCATGAATGCCTTGAAATTGATCCTAACCACTCCGATATCGCCTGCTCGGATGATTCTGACAAGTCAGATAATGGAAATGACAAATGCGCAAGTGCATTCCTTCCTGAAAAAAAGAGGGAAGAAAATTTTGTCAACGCCTCTCTTTCACACTATGGGACCTTAAACAACTACTTCATTGACTTCAATAGCGTAGATCTGGAAGAAAATGCTCCTGACAGGACTCATCTGGGACAAACTAGGGATGGAGAACATAATTTAACAAGCACCTCCACCAAAGAGGTCACAAATGCCTGCTCAAATAAGGTAGCAGGGCAGAAATCTCTAGCAGGTTTATGCATACTGCTTGCTGAGGATACCCCAGTTCTGCAAAGAGTCGCTACCATAATGCTGGAAAAATTGGGAGCTAAAGTGGTGGTTGTAGGAGATGGACTACAGGCAGTGGAAGCACTGAAACCTGTGCCTAATTCAGATG</gDNA_template>
            <first_frame> S  F  C  N  A  P  V  E  G  D  S  H  E  C  L  E  I  D  P  N  H  S  D  I  A  C  S  D  D  S  D  K  S  D  N  G  N  D  K  C  A  S  A  F  L  P  E  K  K  R  E  E  N  F  V  N  A  S  L  S  H  Y  G  T  L  N  N  Y  F  I  D  F  N  S  V  D  L  E  E  N  A  P  D  R  T  H  L  G  Q  T  R  D  G  E  H  N  L  T  S  T  S  T  K  E  V  T  N  A  C  S  N  K  V  A  G  Q  K  S  L  A  G  L  C  I  L  L  A  E  D  T  P  V  L  Q  R  V  A  T  I  M  L  E  K  L  G  A  K  V  V  V  V  G  D  G  L  Q  A  V  E  A  L  K  P  V  P  N  S  D  </first_frame>
            <second_frame>  L  F  V  M  H  Q  *  K  E  I  R  M  N  A  L  K  L  I  L  T  T  P  I  S  P  A  R  M  I  L  T  S  Q  I  M  E  M  T  N  A  Q  V  H  S  F  L  K  K  R  G  K  K  I  L  S  T  P  L  F  H  T  M  G  P  *  T  T  T  S  L  T  S  I  A  *  I  W  K  K  M  L  L  T  G  L  I  W  D  K  L  G  M  E  N  I  I  *  Q  A  P  P  P  K  R  S  Q  M  P  A  Q  I  R  *  Q  G  R  N  L  *  Q  V  Y  A  Y  C  L  L  R  I  P  Q  F  C  K  E  S  L  P  *  C  W  K  N  W  E  L  K  W  W  L  *  E  M  D  Y  R  Q  W  K  H  *  N  L  C  L  I  Q  M </second_frame>
            <third_frame>   F  L  *  C  T  S  R  R  R  F  A  *  M  P  *  N  *  S  *  P  L  R  Y  R  L  L  G  *  F  *  Q  V  R  *  W  K  *  Q  M  R  K  C  I  P  S  *  K  K  E  G  R  K  F  C  Q  R  L  S  F  T  L  W  D  L  K  Q  L  L  H  *  L  Q  *  R  R  S  G  R  K  C  S  *  Q  D  S  S  G  T  N  *  G  W  R  T  *  F  N  K  H  L  H  Q  R  G  H  K  C  L  L  K  *  G  S  R  A  E  I  S  S  R  F  M  H  T  A  C  *  G  Y  P  S  S  A  K  S  R  Y  H  N  A  G  K  I  G  S  *  S  G  G  C  R  R  W  T  T  G  S  G  S  T  E  T  C  A  *  F  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020N19.2" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94182" stop="93679"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>504</number_coding_nucleotides>
                  <number_encoded_amino_acids>168</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFCNAPVEGDSHECLEIDPNHSDIACSDDSDKSDNGNDKCASAFLPEKKREENFVNASLSHYGTLNNYFIDFNSVDLEENAPDRTHLGQTRDGEHNLTSTSTKEVTNACSNKVAGQKSLAGLCILLAEDTPVLQRVATIMLEKLGAKVVVVGDGLQAVEALKPVPNSD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="94848" PGL_stop="95365"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94848" e_stop="95365"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="94848" e_stop="95365" e_length="518"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94848" stop="95365"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="TG484-R" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAGTTTAGTTGAAGGCATAATTGCATCACTGTTCCTGGTCCATTTTTCTTTACAACTTTAATCTCTCCACCCATTTTGTTAACCTGTATATCATCCTATCATCATCAGAAGCTGTCAAAGCAGTCAATATATCTTCACTTTTATGCTTAAAGCCAATTCCAAGGGAAACATTTTAAGAAATGATGGATAGTGGAACTTTGCTCAGAGAGTTGTTGTTCATGCCATCCTTTACCTTGTAAGAGGCTTATGACCACATCAAGTCTTAGAAAATCACAAGATAGAACCTGAAATTTATTTAGAGAAAAAAATTGAACTCACCAGGGTACGTACAATGCATAGTCCGAGGCCAGTCCCACCATGCCTGAGTGTGAACATAATCAAACGATGAGTTTTTTTCCTTCCCAGGTACTAACTAGCTTTTAAGGTAGTAAATTCATGCATGTAATCTGTTATTTAACTAAAGAAGTTCACCCATATATGAGAACGATGTGAAAACTTCTTACAAGCGAGTGGTAGA</gDNA_template>
            <first_frame> T  V  *  L  K  A  *  L  H  H  C  S  W  S  I  F  L  Y  N  F  N  L  S  T  H  F  V  N  L  Y  I  I  L  S  S  S  E  A  V  K  A  V  N  I  S  S  L  L  C  L  K  P  I  P  R  E  T  F  *  E  M  M  D  S  G  T  L  L  R  E  L  L  F  M  P  S  F  T  L  *  E  A  Y  D  H  I  K  S  *  K  I  T  R  *  N  L  K  F  I  *  R  K  K  L  N  S  P  G  Y  V  Q  C  I  V  R  G  Q  S  H  H  A  *  V  *  T  *  S  N  D  E  F  F  S  F  P  G  T  N  *  L  L  R  *  *  I  H  A  C  N  L  L  F  N  *  R  S  S  P  I  Y  E  N  D  V  K  T  S  Y  K  R  V  V   </first_frame>
            <second_frame>  Q  F  S  *  R  H  N  C  I  T  V  P  G  P  F  F  F  T  T  L  I  S  P  P  I  L  L  T  C  I  S  S  Y  H  H  Q  K  L  S  K  Q  S  I  Y  L  H  F  Y  A  *  S  Q  F  Q  G  K  H  F  K  K  *  W  I  V  E  L  C  S  E  S  C  C  S  C  H  P  L  P  C  K  R  L  M  T  T  S  S  L  R  K  S  Q  D  R  T  *  N  L  F  R  E  K  N  *  T  H  Q  G  T  Y  N  A  *  S  E  A  S  P  T  M  P  E  C  E  H  N  Q  T  M  S  F  F  P  S  Q  V  L  T  S  F  *  G  S  K  F  M  H  V  I  C  Y  L  T  K  E  V  H  P  Y  M  R  T  M  *  K  L  L  T  S  E  W  *  </second_frame>
            <third_frame>   S  L  V  E  G  I  I  A  S  L  F  L  V  H  F  S  L  Q  L  *  S  L  H  P  F  C  *  P  V  Y  H  P  I  I  I  R  S  C  Q  S  S  Q  Y  I  F  T  F  M  L  K  A  N  S  K  G  N  I  L  R  N  D  G  *  W  N  F  A  Q  R  V  V  V  H  A  I  L  Y  L  V  R  G  L  *  P  H  Q  V  L  E  N  H  K  I  E  P  E  I  Y  L  E  K  K  I  E  L  T  R  V  R  T  M  H  S  P  R  P  V  P  P  C  L  S  V  N  I  I  K  R  *  V  F  F  L  P  R  Y  *  L  A  F  K  V  V  N  S  C  M  *  S  V  I  *  L  K  K  F  T  H  I  *  E  R  C  E  N  F  L  Q  A  S  G  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0020N19.2"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="96540" PGL_stop="96053"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="96540" e_stop="96053"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.984">
            <gDNA_exon_boundary e_start="96540" e_stop="96053" e_length="488"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96540" stop="96053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="TG484-F" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATTGGCTTGCTGGACATTCTTATAAGTGATGGTTTTCTTACAAATGAACAGTATGCAACTATTACTCAAATTCGTAAATGCTCAACTGCCTTGCTTCGGCTTCTAAACAACATTTTGGATCTCAGTAAGGTAAGATGCACACTAACAACTCTTTTGATGATACTTTTCGAAAGAGTTTACTCTTTGATTAACTAAGGTCACCCTACTGTTCCTCGGAGAGATTATAGCATAGATGAAATGGTAATAGACTATTTAGGGTAATGTTGCAGCTAGCTTAAGCTCATTACTCAAAAGAGTGTTTTAATTAGACCTGAGAAAAATCATATATTCATTGGGCAGGTAGAATCTGGAAAACTAGTGTTGGAAGAAACAGAATTTGACTTGGCTCGAGAACTTGAAGGACTTGTTGATATGTTCTCTGTCCAGTGCATTAATCACAATGTTGAGACAGTTCTAGATCTCTCTGGTACATCATTGTTCTCCTTA</gDNA_template>
            <first_frame> L  L  A  C  W  T  F  L  *  V  M  V  F  L  Q  M  N  S  M  Q  L  L  L  K  F  V  N  A  Q  L  P  C  F  G  F  *  T  T  F  W  I  S  V  R  *  D  A  H  *  Q  L  F  *  *  Y  F  S  K  E  F  T  L  *  L  T  K  V  T  L  L  F  L  G  E  I  I  A  *  M  K  W  *  *  T  I  *  G  N  V  A  A  S  L  S  S  L  L  K  R  V  F  *  L  D  L  R  K  I  I  Y  S  L  G  R  *  N  L  E  N  *  C  W  K  K  Q  N  L  T  W  L  E  N  L  K  D  L  L  I  C  S  L  S  S  A  L  I  T  M  L  R  Q  F  *  I  S  L  V  H  H  C  S  P   </first_frame>
            <second_frame>  Y  W  L  A  G  H  S  Y  K  *  W  F  S  Y  K  *  T  V  C  N  Y  Y  S  N  S  *  M  L  N  C  L  A  S  A  S  K  Q  H  F  G  S  Q  *  G  K  M  H  T  N  N  S  F  D  D  T  F  R  K  S  L  L  F  D  *  L  R  S  P  Y  C  S  S  E  R  L  *  H  R  *  N  G  N  R  L  F  R  V  M  L  Q  L  A  *  A  H  Y  S  K  E  C  F  N  *  T  *  E  K  S  Y  I  H  W  A  G  R  I  W  K  T  S  V  G  R  N  R  I  *  L  G  S  R  T  *  R  T  C  *  Y  V  L  C  P  V  H  *  S  Q  C  *  D  S  S  R  S  L  W  Y  I  I  V  L  L  </second_frame>
            <third_frame>   I  G  L  L  D  I  L  I  S  D  G  F  L  T  N  E  Q  Y  A  T  I  T  Q  I  R  K  C  S  T  A  L  L  R  L  L  N  N  I  L  D  L  S  K  V  R  C  T  L  T  T  L  L  M  I  L  F  E  R  V  Y  S  L  I  N  *  G  H  P  T  V  P  R  R  D  Y  S  I  D  E  M  V  I  D  Y  L  G  *  C  C  S  *  L  K  L  I  T  Q  K  S  V  L  I  R  P  E  K  N  H  I  F  I  G  Q  V  E  S  G  K  L  V  L  E  E  T  E  F  D  L  A  R  E  L  E  G  L  V  D  M  F  S  V  Q  C  I  N  H  N  V  E  T  V  L  D  L  S  G  T  S  L  F  S  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020N19.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96265" stop="96053"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LKLITQKSVLIRPEKNHIFIGQVESGKLVLEETEFDLARELEGLVDMFSVQCINHNVETVLDLSGTSLFSL</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020N19.2" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96538" stop="96344"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IGLLDILISDGFLTNEQYATITQIRKCSTALLRLLNNILDLSKVRCTLTTLLMILFERVYSLIN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="97027" PGL_stop="96551"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="97027" e_stop="96551"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="97027" e_stop="96551" e_length="477"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97027" stop="96837"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="TG191-F" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97002" stop="96551"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="TG191-R" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACTTCAGTATCATGATTGGATAAGCTCGTTCTGCTGATTTATCGATGCTTAATGATCTGCAAACTTTGCAGGTAGGAGTTATCATCATTCCAAGGAAATATATAATGGGAAAGGTAGATGAGAGGGCTATCAAGACTCTTGTAATATTGATCTCAGCATCAATATGCATCCTAATCATTGGATGTGTCTGCATCTTCGTACTAACAGATGGAGTGTCAAAGGAAATGAAACTTAGAGCAGAGCTGATAAGCCAGTTAGATGCAAGAAGGAAAGCAGAGGCATCGAGCAATTACAAAAGCCAATTTCTAGCGAACATGAGGTGAATATTCATCACTCCTTTGTTACTTCCGCTCTTCTATTCTACATCTTACCTCTGCGAAAGATTCATTCTCAGTTTAAATTTTTAGTTTCTCATATGTACATTTCTACAGTTACTTCATGCTTTGTTTTTTCACAGTCATGAATTACGAACACCT</gDNA_template>
            <first_frame> H  F  S  I  M  I  G  *  A  R  S  A  D  L  S  M  L  N  D  L  Q  T  L  Q  V  G  V  I  I  I  P  R  K  Y  I  M  G  K  V  D  E  R  A  I  K  T  L  V  I  L  I  S  A  S  I  C  I  L  I  I  G  C  V  C  I  F  V  L  T  D  G  V  S  K  E  M  K  L  R  A  E  L  I  S  Q  L  D  A  R  R  K  A  E  A  S  S  N  Y  K  S  Q  F  L  A  N  M  R  *  I  F  I  T  P  L  L  L  P  L  F  Y  S  T  S  Y  L  C  E  R  F  I  L  S  L  N  F  *  F  L  I  C  T  F  L  Q  L  L  H  A  L  F  F  H  S  H  E  L  R  T  P </first_frame>
            <second_frame>  T  S  V  S  *  L  D  K  L  V  L  L  I  Y  R  C  L  M  I  C  K  L  C  R  *  E  L  S  S  F  Q  G  N  I  *  W  E  R  *  M  R  G  L  S  R  L  L  *  Y  *  S  Q  H  Q  Y  A  S  *  S  L  D  V  S  A  S  S  Y  *  Q  M  E  C  Q  R  K  *  N  L  E  Q  S  *  *  A  S  *  M  Q  E  G  K  Q  R  H  R  A  I  T  K  A  N  F  *  R  T  *  G  E  Y  S  S  L  L  C  Y  F  R  S  S  I  L  H  L  T  S  A  K  D  S  F  S  V  *  I  F  S  F  S  Y  V  H  F  Y  S  Y  F  M  L  C  F  F  T  V  M  N  Y  E  H   </second_frame>
            <third_frame>   L  Q  Y  H  D  W  I  S  S  F  C  *  F  I  D  A  *  *  S  A  N  F  A  G  R  S  Y  H  H  S  K  E  I  Y  N  G  K  G  R  *  E  G  Y  Q  D  S  C  N  I  D  L  S  I  N  M  H  P  N  H  W  M  C  L  H  L  R  T  N  R  W  S  V  K  G  N  E  T  *  S  R  A  D  K  P  V  R  C  K  K  E  S  R  G  I  E  Q  L  Q  K  P  I  S  S  E  H  E  V  N  I  H  H  S  F  V  T  S  A  L  L  F  Y  I  L  P  L  R  K  I  H  S  Q  F  K  F  L  V  S  H  M  Y  I  S  T  V  T  S  C  F  V  F  S  Q  S  *  I  T  N  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020N19.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97003" stop="96704"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>297</number_coding_nucleotides>
                  <number_encoded_amino_acids>99</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ARSADLSMLNDLQTLQVGVIIIPRKYIMGKVDERAIKTLVILISASICILIIGCVCIFVLTDGVSKEMKLRAELISQLDARRKAEASSNYKSQFLANMR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020N19.2" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96791" stop="96564"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRADKPVRCKKESRGIEQLQKPISSEHEVNIHHSFVTSALLFYILPLRKIHSQFKFLVSHMYISTVTSCFVFSQS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="127600" PGL_stop="124697"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="127600" e_stop="127445"/>
            <exon e_start="127349" e_stop="127236"/>
            <exon e_start="127110" e_stop="127005"/>
            <exon e_start="125313" e_stop="125199"/>
            <exon e_start="125117" e_stop="124908"/>
            <exon e_start="124781" e_stop="124697"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.948" acc_prob="0.999" e_score="0.923"/>
          <exon-intron don_prob="0.999" acc_prob="0.987" e_score="0.991"/>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="0.972"/>
          <exon-intron don_prob="0.991" acc_prob="0.993" e_score="0.974"/>
          <exon-intron don_prob="1.000" acc_prob="0.521" e_score="0.995"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.923">
            <gDNA_exon_boundary e_start="127600" e_stop="127445" e_length="156"/>
          </exon>
          <intron i_serial="1" don_prob="0.948" acc_prob="0.999">
            <gDNA_intron_boundary i_start="127444" i_stop="127350" i_length="95"/>
          </intron>
          <exon e_serial="2" e_score="0.991">
            <gDNA_exon_boundary e_start="127349" e_stop="127236" e_length="114"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.987">
            <gDNA_intron_boundary i_start="127235" i_stop="127111" i_length="125"/>
          </intron>
          <exon e_serial="3" e_score="0.972">
            <gDNA_exon_boundary e_start="127110" e_stop="127005" e_length="106"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="127004" i_stop="125314" i_length="1691"/>
          </intron>
          <exon e_serial="4" e_score="0.974">
            <gDNA_exon_boundary e_start="125313" e_stop="125199" e_length="115"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.993">
            <gDNA_intron_boundary i_start="125198" i_stop="125118" i_length="81"/>
          </intron>
          <exon e_serial="5" e_score="0.995">
            <gDNA_exon_boundary e_start="125117" e_stop="124908" e_length="210"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.521">
            <gDNA_intron_boundary i_start="124907" i_stop="124782" i_length="126"/>
          </intron>
          <exon e_serial="6" e_score="0.988">
            <gDNA_exon_boundary e_start="124781" e_stop="124697" e_length="85"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="127600" stop="127445"/>
              <exon start="127349" stop="127236"/>
              <exon start="127110" stop="127005"/>
              <exon start="125313" stop="125199"/>
              <exon start="125117" stop="124908"/>
              <exon start="124781" stop="124697"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="C2_At4g38630" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTTCGGATTGTGATTTTTCCTCCTTAAAGCACCAACTCCCTCCGCAAGTAAACTCAAATTCCTTCCAATTTATTTTTCAGAGAGAACGAAAAGATTTCTCAGTTTAATCTTCCAATTATTGGATTTTTCTTCAATCGTTAACCATGGTGCTCGAG : GCGACAATGATCTGCATCGACAATTCGGAGTGGATGAGAAACGGTGATTACTCGCCCAATAGGTTCCAAGCTCTAGCAGACGCTGTTAATCTAATCTGTGGTGCCAAAACCCAG : TCTAATCCCGAGAATACAGTTGGAATTTTGACGATGGCTGGTAAAGGGGTTCGAGTGTTAGTCACTCCGACCAGCGATCTTGGAAAAATTTTAGCTTGTATGCACG : GATTGGAGATAGGCGGTGAGATGAATTTGGCTGCTGGAATCCAGGTAGCCCAGTTGGCTTTGAAGCACCGACAAAACAAGAAGCAACAACAAAGGATTATTGTTTTTGCTGGCAG : CCCTGTTAAATATGACAAGAAGGTCTTGGAGATGATTGGGAGAAAGTTGAAGAAGAATAGTGTAGCTCTTGATGTGGTTAATTTTGGTGAAGATGATGAAGGGAAAGCTGAGAAGCTAGAGGCACTAGTTGCTGCGCTTAATACCAACGACAGTAGTCACATCATTCATATTCCTCCTGGTCCTAATGCTCTCTCTGATGTTCTCATAAG : TACTCCTATTTTCACTGGTGATGGAGAAGGTGGCAGTGGATTTGCTGCTGCTGCTGCAGCGGCTGCTGCTGGTGGAGTGTCTGGA</gDNA_template>
            <first_frame> S  S  D  C  D  F  S  S  L  K  H  Q  L  P  P  Q  V  N  S  N  S  F  Q  F  I  F  Q  R  E  R  K  D  F  S  V  *  S  S  N  Y  W  I  F  L  Q  S  L  T  M  V  L  E  :  A  T  M  I  C  I  D  N  S  E  W  M  R  N  G  D  Y  S  P  N  R  F  Q  A  L  A  D  A  V  N  L  I  C  G  A  K  T  Q  :  S  N  P  E  N  T  V  G  I  L  T  M  A  G  K  G  V  R  V  L  V  T  P  T  S  D  L  G  K  I  L  A  C  M  H   : G  L  E  I  G  G  E  M  N  L  A  A  G  I  Q  V  A  Q  L  A  L  K  H  R  Q  N  K  K  Q  Q  Q  R  I  I  V  F  A  G  S :   P  V  K  Y  D  K  K  V  L  E  M  I  G  R  K  L  K  K  N  S  V  A  L  D  V  V  N  F  G  E  D  D  E  G  K  A  E  K  L  E  A  L  V  A  A  L  N  T  N  D  S  S  H  I  I  H  I  P  P  G  P  N  A  L  S  D  V  L  I  S :   T  P  I  F  T  G  D  G  E  G  G  S  G  F  A  A  A  A  A  A  A  A  A  G  G  V  S  G </first_frame>
            <second_frame>  L  R  I  V  I  F  P  P  *  S  T  N  S  L  R  K  *  T  Q  I  P  S  N  L  F  F  R  E  N  E  K  I  S  Q  F  N  L  P  I  I  G  F  F  F  N  R  *  P  W  C  S  R :   R  Q  *  S  A  S  T  I  R  S  G  *  E  T  V  I  T  R  P  I  G  S  K  L  *  Q  T  L  L  I  *  S  V  V  P  K  P  S :   L  I  P  R  I  Q  L  E  F  *  R  W  L  V  K  G  F  E  C  *  S  L  R  P  A  I  L  E  K  F  *  L  V  C  T  :  D  W  R  *  A  V  R  *  I  W  L  L  E  S  R  *  P  S  W  L  *  S  T  D  K  T  R  S  N  N  K  G  L  L  F  L  L  A   : A  L  L  N  M  T  R  R  S  W  R  *  L  G  E  S  *  R  R  I  V  *  L  L  M  W  L  I  L  V  K  M  M  K  G  K  L  R  S  *  R  H  *  L  L  R  L  I  P  T  T  V  V  T  S  F  I  F  L  L  V  L  M  L  S  L  M  F  S  *   : V  L  L  F  S  L  V  M  E  K  V  A  V  D  L  L  L  L  L  Q  R  L  L  L  V  E  C  L   </second_frame>
            <third_frame>   F  G  L  *  F  F  L  L  K  A  P  T  P  S  A  S  K  L  K  F  L  P  I  Y  F  S  E  R  T  K  R  F  L  S  L  I  F  Q  L  L  D  F  S  S  I  V  N  H  G  A  R   : G  D  N  D  L  H  R  Q  F  G  V  D  E  K  R  *  L  L  A  Q  *  V  P  S  S  S  R  R  C  *  S  N  L  W  C  Q  N  P   : V  *  S  R  E  Y  S  W  N  F  D  D  G  W  *  R  G  S  S  V  S  H  S  D  Q  R  S  W  K  N  F  S  L  Y  A  R :   I  G  D  R  R  *  D  E  F  G  C  W  N  P  G  S  P  V  G  F  E  A  P  T  K  Q  E  A  T  T  K  D  Y  C  F  C  W  Q  :  P  C  *  I  *  Q  E  G  L  G  D  D  W  E  K  V  E  E  E  *  C  S  S  *  C  G  *  F  W  *  R  *  *  R  E  S  *  E  A  R  G  T  S  C  C  A  *  Y  Q  R  Q  *  S  H  H  S  Y  S  S  W  S  *  C  S  L  *  C  S  H  K  :  Y  S  Y  F  H  W  *  W  R  R  W  Q  W  I  C  C  C  C  C  S  G  C  C  W  W  S  V  W  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0020N19.2" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="127492" stop="127445"/>
                    <exon start="127349" stop="127236"/>
                    <exon start="127110" stop="127005"/>
                    <exon start="125313" stop="125199"/>
                    <exon start="125117" stop="124908"/>
                    <exon start="124781" stop="124697"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>678</number_coding_nucleotides>
                  <number_encoded_amino_acids>226</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSNYWIFLQSLTMVLEATMICIDNSEWMRNGDYSPNRFQALADAVNLICGAKTQSNPENTVGILTMAGKGVRVLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPVKYDKKVLEMIGRKLKKNSVALDVVNFGEDDEGKAEKLEALVAALNTNDSSHIIHIPPGPNALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 19 chains have been computed
$ 
$ memory statistics:
$ 21656 bytes spliced alignments in total
$ 11 spliced alignments have been stored
$ 1968 bytes was the average size of a spliced alignment
$ 13920 bytes predicted gene locations in total
$ 8 predicted gene locations have been stored
$ 1740 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 19 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 11:28:11
-->
