<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-12-01 11:48:07"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E324728" ref_strand="+" ref_description="SGN-E324728 [cTOC-8-D22]">
      <seq>ccatcgggaaaattaaaaattagcagctaaagtgggatcgtacaaaaccgattggtgcacattcacgaaagccttgttaaccctaggaaatacatgtggttcgagctgtcgctgagaattttagtgtgaaggggattgagaagcttttctttttggtatattacccctcaaatttcagagctcatattccagtcaggtttaacaaggctgaccaactttaatgtggtgttcttatgggtttacggatttggatttttgagttgtattatgaaattgttggagttctgagtggttacagttgtgagaccgtgttgcactagcattttccagttaccattatctttctccagcatgtgagctttcattaagggttcgttcaaggaataagcagaataataccgacttagagtgtatcaagagaaaagaagagaagagtctggcacttttaacacccataatgctgaaactctttgattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="4863" stop="2453"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4563" g_stop="4372" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4371" i_stop="3137" i_length="1235">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.393" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3136" g_stop="3031" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="298" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="3030" i_stop="2932" i_length="99">
            <donor d_prob="0.629" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="2931" g_stop="2753" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="477" r_length="179" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E324728" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E324728" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4563" e_stop="4372"/>
          <exon e_start="3136" e_stop="3031"/>
          <exon e_start="2931" e_stop="2753"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATCGGGAAAATTAAAAATTAGCAGCTAAAATAAGATCGTACAAAACCGATTGGTGCACATTCACGAAAGCCTTGTTAACCCTAGGAAATAGATGTGGTTCGAGCTGTCGCTGAGAATTTTAGTGTGAAGGGGATTGAGAAGCTTTTCTTTTTGGTATATTACCCCTCAAATTTCAGAGCTCATATTCCAGGTACTTAATTGTTCATTCCAAGAAAATTTCTTAAATTTCTTGTAATTGGAGTTAATGGGTGTTTGAAAAATTCAATCTTTATTACTCAGACATATGTAACAGATAGGAAGATGGTGATGGGGATAAGAAAGCCTTTGTTGCGTAGCTTTTTGCAAAATTATGTCTTTGGAGGATGGTGTTTGAGAAGTTGTAAACACAGCTTTAAGCTTCCACTTAAACCCTAAATAAGAGGGAAATTGAGACTAGCTGATTTGCTTAACGTGATTTTCAAGATTAACAATACTACAACAACAAAAACATACTAATACACTGGTGAGGGTAGGATGCATGCAAACCTCACCCTACGTAGAGAGACAGTTTATGATAGATCCTTGAAACTAGTGATGAACTGATGATAAATAGAGTGAATGTATGACTTATGTTCTCTGTTTAGTAATCCTTAGATATCCGTGAAACTCTTCTGCCACAAATGTGTGTCTTTGTTAGTAACATAAATAAATAAATACAAAAAAATGGGAGCTGCATCTAGTGACATTTTTATAGTGGTTGAGTAAACTTTTAGCGAAAATTGCTTATCTGTTGGTCCTCTTTATGTTGTTTTCCTACTTATATTATCTGTTTATTTATCCAGTTTGTAACTTGCTTACTTCTTTCTGCTTGTTCTCATTGGTTTGTTTTCTTCTTTCTGGTGTTTAGATCAATAAGAATTACTTTTACTTTATCGGGAATTAGAAATAGGAAGAATGGCTACTTTGGTTTAAAGAAAGAGGAAGAGTCGTTTCAGAATCGAGCCTGATTTATTGATGATGAATTTAAGACCATCGGAATTGGAAAATCAAATAGTTTCGTCATGTTTTTCGTTTTGATTCCGCCCACCCAGTGGTAACATTCAGATAATTTACTTCAAGCTGATACCCAATGTCTAATAGTATGAGCACCTGAGTTGCAGGTTCACCATACTGCGATTTCACTGGTTTTATTGTGTACGCTCCTTATTTGAGGTTCAAGACTAAAAATTGGTTGTAGAGATGTACGTTGAGTGTAGCCTTGTGTATGAACTTCCATTTTTGGCATAATCATATTTGTTTCAGTTCAACTTTAGGTTGTTAAGAAGACTCTAAATAGCCAAGAGAGTGACTTGGTTAGACATTAGAATTCCCAAGCAACACTTATCCTGTTTGAAAGTATTTTTCTTTAACTCAAAGCGTTACTCTCATTTTGCTGCGTGCATGCAGTCAGGTTTAACAAGGCTGACCAACTTTAATGTGGTGTTCTTATGGGTTTACGGATTTGGATTTTTGAGTTGTATTATGAAATTGTTGGAGTTCTGAGTGGTTACAGGTACTTCATTTTATTTCAGCGTTTGATTTGTGCAGATTCCTTTAAGTCATTTGCTTCTCATACATACACAAGCTAGTTACACCTTAATCTATCATACAGTTGTGAGACCGTGTTGCACTAGCATCTTCCAGTTACCATTATCTTTCTCCAGCATGTGAGCTTTCATTAAGGGTTCGTTCAAGGAATAAGCAGTATAATACCGACTTAGAGTGTATCAAGAGAAAAGAAGAGAAGAGTCTGGCAGTTTTAAGACCCATAATGCTGAAACTCTTTGATTC</genome_strand>
        <mrna_strand>CCATCGGGAAAATTAAAAATTAGCAGCTAAAGTGGGATCGTACAAAACCGATTGGTGCACATTCACGAAAGCCTTGTTAACCCTAGGAAATACATGTGGTTCGAGCTGTCGCTGAGAATTTTAGTGTGAAGGGGATTGAGAAGCTTTTCTTTTTGGTATATTACCCCTCAAATTTCAGAGCTCATATTCCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGTTTAACAAGGCTGACCAACTTTAATGTGGTGTTCTTATGGGTTTACGGATTTGGATTTTTGAGTTGTATTATGAAATTGTTGGAGTTCTGAGTGGTTACAG...................................................................................................TTGTGAGACCGTGTTGCACTAGCATTTTCCAGTTACCATTATCTTTCTCCAGCATGTGAGCTTTCATTAAGGGTTCGTTCAAGGAATAAGCAGAATAATACCGACTTAGAGTGTATCAAGAGAAAAGAAGAGAAGAGTCTGGCACTTTTAACACCCATAATGCTGAAACTCTTTGATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E720065" ref_strand="+" ref_description="SGN-E720065 [FC09CH07]">
      <seq>gcggccaaatcggccgaattgactcctcaatttcttctctctgctatcaccaggaaaccatttcgctcgctagcagctccaacttactaatctacaaagttaagggttattttactcgttgtatggcttcctcaatggttggggcacaaccatcattctcaacactagcaatatcaaccaacgaacctgttgtttcagttgactggctccatgcaaacatcaaagaccccgacttaaaggtgttagatgcatcttggtacatgccagatgagcagagaaatccactccaggagtatcaggtcgcttgcattcctggagcactattctttgatatagacggaataactgatcggactacaaatttgccacatatgttgccgtctgaagaagcatttgcagctgctgtgtctgctcttggtatcaagaacaaagatggggttgttatatacgatggcaagggcattttcagtgctgcccgtgtttggtggatgtttcgagcttttggacatgacaaagtttgggttttggatggtggcttgccaagatggcgtgcttcaggttatgatgtcgagtcacctggtgatgccattctgaaagctagtgttgccactgaggcaattgagaaagtataccaaggacagatggttggaccttctaccttccagaccaagtttcagcctcatcttgtctggagtcttgatcaggttaaaaggaacattcaagaccagacatatcagcatatagatgctcgatccaaagctaggtttgatggtgttgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="6557" stop="10887"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6862" g_stop="6889" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="51" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6890" i_stop="7522" i_length="633">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.728" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7523" g_stop="7710" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="239" r_length="188" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7711" i_stop="8030" i_length="320">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8031" g_stop="8090" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="299" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8091" i_stop="8275" i_length="185">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.786" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8276" g_stop="8338" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="362" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8339" i_stop="8583" i_length="245">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="8584" g_stop="8708" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="487" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="8709" i_stop="8789" i_length="81">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="8790" g_stop="8946" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="644" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="8947" i_stop="9785" i_length="839">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="9786" g_stop="9845" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="645" r_stop="704" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="9846" i_stop="10526" i_length="681">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="10527" g_stop="10585" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="705" r_stop="763" r_length="59" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E720065" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E720065" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6862" e_stop="6889"/>
          <exon e_start="7523" e_stop="7710"/>
          <exon e_start="8031" e_stop="8090"/>
          <exon e_start="8276" e_stop="8338"/>
          <exon e_start="8584" e_stop="8708"/>
          <exon e_start="8790" e_stop="8946"/>
          <exon e_start="9786" e_stop="9845"/>
          <exon e_start="10527" e_stop="10585"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTCAATTTCTTCTCTCTGCTATCACCGTAAGTTCCCTATATCTCCTCCTTGATTTCCTTTCTCTGATTTCTATTCATTTTGATTTTGATTTGCATTTTTCTTCAATTATTTGAAACCAGATTTTACTGAAGTTGCAGATTTTGATTTTGTTGGATATTTTTGTTTCTCAATGCACAGTTCATTTGTTCTTGCTATCTCTCTTCTTACTATAAAAAATTTGTTACTTGTATACTTTCATGGCTTATCAAAGATTTAACTAACAATTTGATTGTTTGATTTTGACTTTGACACTGAGTTTAAGAAAACAAAGAGATTTTTGAATGTTGTGGGATCTTGTGGTTATGTGGGAAGTTCCAAAAAGGAAAATTGAAACTACACAAACAAATACGAATGGAGGGGTACATGTATTTGTTAATTTTTCATCTTTTGCAAGTTACAGTTTCATTAGTGGATAAAGCTTAAAATTTAAGATGTGGGTTTATTCCTCTTACTGGAAAGATTAAGATTAAGAGTTATTGGAATTTTAATGCATGGCAAAATTGTGATTTCTATGTGAAAACTCTTTATTAGCAGCATCAATTTCTGGGCTTGTATATTCTTGAATTTCATTTTCCTTGGGAAGTTGGCAAGAATGTTCATCATTTGCTTAATCCTTGCAGAGGAAACCATTTCGCTCGCTAGCAGCTCCAACTTACTAATCTACAAAGTTAAGGGTTATTTTACTCGTTGTATGGCTTCCTCAATGGTTGGGGCACAACCATCATTCTCAACACTAGCAATATCAACCAACGAACCTGTTGTTTCAGTTGACTGGCTCCATGCAAACATCAGAGACCCCGACTTAAAGGTTTCTGATCTTTTCAGTCTTAGCAGTCAAAATACTTGATAAAGAATAAGATGGTGATAGTATGGCCGTTATTACAACTGTCTAAACTACATTTGCTGCTCTAAATATTAAATCTGAAGTTGCATTTTTTGTTCACTCAACTCATGCCTATAAAAAGGACAATTCTTTTCCTTTTCTGTTCATTTCTATTTAGCAACACATTTGCACATGTTTTCTTTCTCTTCCAATTTTTCGGGTGGGGTGTGTGGTGCTGGTTGTATTATGTGAGGCATCTGTCAAATAGTACTGAGATTTTGTTTCTTTTTCCTATTCTTCTAAAGGTGTTAGATGCATCTTGGTACATGCCAGATGAGCAGAGAAATCCACTCCAGGAGTATCAGGTGCTGACTCCTGAGAAATTCTTTTCTGAATGACACTGCTTTATCTTGAATCACTGATTGCTTTCTAGAAAATATGTTCACAGATAAGCAATTTTCTTTTTCTCAGTCGCATTTATGGTAATTTTGTTCAACAGTCACTTTCATTCTGTTTTTCTGGTAGAATTTTCTAACTTCAACTAGAGCAGGTCGCTTGCATTCCTGGAGCACTATTCTTTGATATAGACGGAATAACTGATCGGACTACAAATGTGAGATATCTTCCCTGCTAAATTATTTCTCCTCTAGAAAGAGTGATTTTGCTCGACATAATCTTTGCAAATTACTAAACCTTCTCTGGTTTCAGTTTCTCTTCTTTGCAAATTATTTCTGTTTCATTTTTGTCCCATATATGTTTCTCCCTGTACTGTAATAGATGCTTCAGCTAGCCATCCTGCATGCTTTTGAGATAGATTTCATCATCTTTTATGATATAAAAGCTTTATTGATTTATCAGTTGCCACATATGTTGCCGTCTGAAGAAGCATTTGCAGCTGCTGTGTCTGCTCTTGGTATCAAGAACAAAGATGGGGTTGTTATATACGATGGCAAGGGCATTTTCAGTGCTGCCCGTGTTTGGTGGTGAGTTATTCAATTGATGATAAAAGGCGGTTAAGTTCATATTATGCAAAAGTGTCTAATCAATGGAATATGGGTAATCAGGATGTTTCGAGCTTTTGGACATGACAAAGTTTGGGTTTTGGATGGTGGCTTGCCAAGATGGCGTGCTTCAGGTTATGATGTCGAGTCACCTGGTGATGCCATTCTGAAAGCTAGTGTTGCCACTGAGGCAATTGAGAAAGTATACCAAGGACAGATGGTAAGATGAACATTTCTCAATTTCCTTTATCTCACTAAGCTTGTAGCCTTGTACATCTTTAAATAAAACAAGATTCCACAAGAATAGCACCTTTTGAAGCAATAGGGTGAGGTTCTCTAAGTTTTATTGTCTTCTCGGGACTTTTGCTGCATCGTTCCAAATAATGCTTAAGTAATGACTCTGTTGGTGCTTCTTGAATATCCGGAGGGCTCCACAGACTCATCTTGTTCATGTTATAACCGTTCATTATGTAAGGATGAACAACTTTTGTTTTTACCTCAAGTCAGACTATCTTAGATTCTTTTTCCCCTTAACCGATTTAAGAAATAATTCTCTCATTATGTTACTTAAATGAAAATCTATCCTTTTTATAAGTAAATTTACTGAAAAGTGAAAACAGTACCCAGGTGATGCAAAAATTACAGAGATGGACTTAAGAACTCCTAGTATATGCTTGAAGAGTCAATCAAGTCCATCATATTTGCTTGCTCCTTAATTGTATCCCCTCTGTTCCAAAAATACAAGTATTAAAGATAACTATACTTTACAAAAGTTTCAAGGAACTGTAGTTGTCTTCCATAGGATGCAGTGAATGATTTGATGTTTGACAAGTTCCCAATTCCTTAATTCTTTTTTTATTGGGGATGTATATGATGAAAATACCTTTTCAATCACACTTTGTCCACTTGGAATTTATGAATATAAAGTTGAAACATTAGTTTTTCTTGCTGTGTAGAACTTCTAGGTACATTTTCTTTCTCCCTCTCTTCGTATGTTCTGACGTTGTGCATTTAATGTTATATTGTTCAAATGTTTCTCTTAGAACCTTTAATGTGCAGGTTGGACCTTCTACCTTCCAGACCAAGTTTCAGCCTCATCTTGTCTGGAGTCTTGATCAGGTTGGTTTCCTTGATTGCTTTCTGCCGTACAACACTTGGTGGTGGTTGCATCTAGCCATGTATCATGAAGCTGATGGTAATGGCAAGGACTTTTTTTGGATTATTGACATTCAGGCGGTATTCAAAATCCAACTATTTAAAATTAGATTTTTTTTAAGAGAAAGGTAAGAGTAGTATTATGAAGTCTCCAGCACAAAGACTATGCTAGGAACAATATCTACTGTTCAAAAAGCAAAACAAAAGGTAAAACATGAACGACACTACAAGTGGACTGCAATTTAGTGGGTATTAGATTGTAAGTTTGTTGGTTGATATTTGTTACCCTTAGTGCAACTTTGTTCTGCAAAAATCTACCTCCGTTTCCCTGATTGACTGGTACAACTCTATGAAGTTTGTGAAGAAAATCTAGGAGGACTAGAACTATGACAATTGGAGGATGTTTTCTACAGAATATTTTGATCTGTTCGTGGATTCTGGTAATAGCTGCTCTTTGTGAAGGTTAATAGTTTGATGATTGTATGATAGTCCAATACTGGAAAAAAATGTGAACACAATCTTGTCACTTGACATAGGTCAGAAAGATTGGATCTTTCAATATATTCTCCATAAATGTATGTATTCTTATCAGAATACTTCTAGCTTGGCTATAGAAATGGAGATATGATTTCTGTATATTTTCAGGTTAAAAGGAACATTCAAGACCAGACATATCAGCATATAGATGCTCGATCCAAAGCTAG</genome_strand>
        <mrna_strand>TCCTCAATTTCTTCTCTCTGCTATCACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAAACCATTTCGCTCGCTAGCAGCTCCAACTTACTAATCTACAAAGTTAAGGGTTATTTTACTCGTTGTATGGCTTCCTCAATGGTTGGGGCACAACCATCATTCTCAACACTAGCAATATCAACCAACGAACCTGTTGTTTCAGTTGACTGGCTCCATGCAAACATCAAAGACCCCGACTTAAAG................................................................................................................................................................................................................................................................................................................................GTGTTAGATGCATCTTGGTACATGCCAGATGAGCAGAGAAATCCACTCCAGGAGTATCAG.........................................................................................................................................................................................GTCGCTTGCATTCCTGGAGCACTATTCTTTGATATAGACGGAATAACTGATCGGACTACAAAT.....................................................................................................................................................................................................................................................TTGCCACATATGTTGCCGTCTGAAGAAGCATTTGCAGCTGCTGTGTCTGCTCTTGGTATCAAGAACAAAGATGGGGTTGTTATATACGATGGCAAGGGCATTTTCAGTGCTGCCCGTGTTTGGTG.................................................................................GATGTTTCGAGCTTTTGGACATGACAAAGTTTGGGTTTTGGATGGTGGCTTGCCAAGATGGCGTGCTTCAGGTTATGATGTCGAGTCACCTGGTGATGCCATTCTGAAAGCTAGTGTTGCCACTGAGGCAATTGAGAAAGTATACCAAGGACAGATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGACCTTCTACCTTCCAGACCAAGTTTCAGCCTCATCTTGTCTGGAGTCTTGATCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAGGAACATTCAAGACCAGACATATCAGCATATAGATGCTCGATCCAAAGCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E391811" ref_strand="+" ref_description="SGN-E391811 [TUS-24-J1]">
      <seq>atttcttctctctgctatcaccaggaaaccatttcgctcgctagcagctccaacttactaatctacaaagttaagggttattttactcgttgtatggcttcctcaatggttggggcacaaccatcattctcaacactagcaatatcaaccaacgaacctgttgtttcagttgactggctccatgcaaacatcagagaccccgacttaaaggtgttagatgcatcttggtacatgccagatgagcagagaaatccactccaggagtatcaggtcgcttgcattcctggagcactattctttgatatagacggaataactgatcggactacaaatttgccacatatgttgccgtctgaagaagcatttgcagctgctgtgtctgctcttggtatcaagaacaaagatggggttgttatatacgatggcaagggcattttcagtgctgcccgtgtttggtggatgtttcgagcttttggacatgacaaagtttgggttttggatggtggcttgccaagatggcgtgcttcaggttatgatgtcgagtcacctggtgatgccattctgaaagctagtgttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="6568" stop="9209"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="6868" g_stop="6889" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="22" r_length="22" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="6890" i_stop="7522" i_length="633">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.728" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7523" g_stop="7710" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="210" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7711" i_stop="8030" i_length="320">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8031" g_stop="8090" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="270" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8091" i_stop="8275" i_length="185">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.786" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8276" g_stop="8338" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="333" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8339" i_stop="8583" i_length="245">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="8584" g_stop="8708" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="334" r_stop="458" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="8709" i_stop="8789" i_length="81">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="8790" g_stop="8909" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="578" r_length="120" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E391811" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E391811" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="6868" e_stop="6889"/>
          <exon e_start="7523" e_stop="7710"/>
          <exon e_start="8031" e_stop="8090"/>
          <exon e_start="8276" e_stop="8338"/>
          <exon e_start="8584" e_stop="8708"/>
          <exon e_start="8790" e_stop="8909"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCTTCTCTCTGCTATCACCGTAAGTTCCCTATATCTCCTCCTTGATTTCCTTTCTCTGATTTCTATTCATTTTGATTTTGATTTGCATTTTTCTTCAATTATTTGAAACCAGATTTTACTGAAGTTGCAGATTTTGATTTTGTTGGATATTTTTGTTTCTCAATGCACAGTTCATTTGTTCTTGCTATCTCTCTTCTTACTATAAAAAATTTGTTACTTGTATACTTTCATGGCTTATCAAAGATTTAACTAACAATTTGATTGTTTGATTTTGACTTTGACACTGAGTTTAAGAAAACAAAGAGATTTTTGAATGTTGTGGGATCTTGTGGTTATGTGGGAAGTTCCAAAAAGGAAAATTGAAACTACACAAACAAATACGAATGGAGGGGTACATGTATTTGTTAATTTTTCATCTTTTGCAAGTTACAGTTTCATTAGTGGATAAAGCTTAAAATTTAAGATGTGGGTTTATTCCTCTTACTGGAAAGATTAAGATTAAGAGTTATTGGAATTTTAATGCATGGCAAAATTGTGATTTCTATGTGAAAACTCTTTATTAGCAGCATCAATTTCTGGGCTTGTATATTCTTGAATTTCATTTTCCTTGGGAAGTTGGCAAGAATGTTCATCATTTGCTTAATCCTTGCAGAGGAAACCATTTCGCTCGCTAGCAGCTCCAACTTACTAATCTACAAAGTTAAGGGTTATTTTACTCGTTGTATGGCTTCCTCAATGGTTGGGGCACAACCATCATTCTCAACACTAGCAATATCAACCAACGAACCTGTTGTTTCAGTTGACTGGCTCCATGCAAACATCAGAGACCCCGACTTAAAGGTTTCTGATCTTTTCAGTCTTAGCAGTCAAAATACTTGATAAAGAATAAGATGGTGATAGTATGGCCGTTATTACAACTGTCTAAACTACATTTGCTGCTCTAAATATTAAATCTGAAGTTGCATTTTTTGTTCACTCAACTCATGCCTATAAAAAGGACAATTCTTTTCCTTTTCTGTTCATTTCTATTTAGCAACACATTTGCACATGTTTTCTTTCTCTTCCAATTTTTCGGGTGGGGTGTGTGGTGCTGGTTGTATTATGTGAGGCATCTGTCAAATAGTACTGAGATTTTGTTTCTTTTTCCTATTCTTCTAAAGGTGTTAGATGCATCTTGGTACATGCCAGATGAGCAGAGAAATCCACTCCAGGAGTATCAGGTGCTGACTCCTGAGAAATTCTTTTCTGAATGACACTGCTTTATCTTGAATCACTGATTGCTTTCTAGAAAATATGTTCACAGATAAGCAATTTTCTTTTTCTCAGTCGCATTTATGGTAATTTTGTTCAACAGTCACTTTCATTCTGTTTTTCTGGTAGAATTTTCTAACTTCAACTAGAGCAGGTCGCTTGCATTCCTGGAGCACTATTCTTTGATATAGACGGAATAACTGATCGGACTACAAATGTGAGATATCTTCCCTGCTAAATTATTTCTCCTCTAGAAAGAGTGATTTTGCTCGACATAATCTTTGCAAATTACTAAACCTTCTCTGGTTTCAGTTTCTCTTCTTTGCAAATTATTTCTGTTTCATTTTTGTCCCATATATGTTTCTCCCTGTACTGTAATAGATGCTTCAGCTAGCCATCCTGCATGCTTTTGAGATAGATTTCATCATCTTTTATGATATAAAAGCTTTATTGATTTATCAGTTGCCACATATGTTGCCGTCTGAAGAAGCATTTGCAGCTGCTGTGTCTGCTCTTGGTATCAAGAACAAAGATGGGGTTGTTATATACGATGGCAAGGGCATTTTCAGTGCTGCCCGTGTTTGGTGGTGAGTTATTCAATTGATGATAAAAGGCGGTTAAGTTCATATTATGCAAAAGTGTCTAATCAATGGAATATGGGTAATCAGGATGTTTCGAGCTTTTGGACATGACAAAGTTTGGGTTTTGGATGGTGGCTTGCCAAGATGGCGTGCTTCAGGTTATGATGTCGAGTCACCTGGTGATGCCATTCTGAAAGCTAGTGTTGC</genome_strand>
        <mrna_strand>ATTTCTTCTCTCTGCTATCACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAAACCATTTCGCTCGCTAGCAGCTCCAACTTACTAATCTACAAAGTTAAGGGTTATTTTACTCGTTGTATGGCTTCCTCAATGGTTGGGGCACAACCATCATTCTCAACACTAGCAATATCAACCAACGAACCTGTTGTTTCAGTTGACTGGCTCCATGCAAACATCAGAGACCCCGACTTAAAG................................................................................................................................................................................................................................................................................................................................GTGTTAGATGCATCTTGGTACATGCCAGATGAGCAGAGAAATCCACTCCAGGAGTATCAG.........................................................................................................................................................................................GTCGCTTGCATTCCTGGAGCACTATTCTTTGATATAGACGGAATAACTGATCGGACTACAAAT.....................................................................................................................................................................................................................................................TTGCCACATATGTTGCCGTCTGAAGAAGCATTTGCAGCTGCTGTGTCTGCTCTTGGTATCAAGAACAAAGATGGGGTTGTTATATACGATGGCAAGGGCATTTTCAGTGCTGCCCGTGTTTGGTG.................................................................................GATGTTTCGAGCTTTTGGACATGACAAAGTTTGGGTTTTGGATGGTGGCTTGCCAAGATGGCGTGCTTCAGGTTATGATGTCGAGTCACCTGGTGATGCCATTCTGAAAGCTAGTGTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E346366" ref_strand="+" ref_description="SGN-E346366 [cTOF-23-K13]">
      <seq>aggaaaccatttcgctcgctagcagctccaacttactaatctacaaagttaagggttattttactcgttgtatggcttcctcaatggttggggcacaaccatcattctcaacactagcaatatcaaccaacgaacctgttgtttcagttgactggctccatgcaaacatcagagaccccgacttaaaggtgttagatgcatcttggtacatgccagatgagcagagaaatccactccaggagtatcaggtcgcttgcattcctggagcactattctttgatatagacggaataactgatcggactacaaatttgccacatatgttgccgtctgaagaagcatttgcagctgctgtgtctgctcttggtatcaagaacaaagatggggttgttatatacgatggcaagggcattttcagtgctgcccgtgtttggtggatgtttcgagcttttggacatgacaaagtttgggttttggatggtggcttgccaagatggcgtgcttcaggttatgatgtcgagtcacctggtgatgccattctgaaagctagtgttgccactgaggcaattgagaaagtataccaaggacagatggttggaccttctaccttccagaccaagtttcagcctcatcttgtctggagtcttgatcaggttaaaaggaacattcaagaccagacatatcagcatatagatgctcgatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="7223" stop="10877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7523" g_stop="7710" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7711" i_stop="8030" i_length="320">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8031" g_stop="8090" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="248" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8091" i_stop="8275" i_length="185">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.786" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8276" g_stop="8338" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="311" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8339" i_stop="8583" i_length="245">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8584" g_stop="8708" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="436" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8709" i_stop="8789" i_length="81">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="8790" g_stop="8946" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="593" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="8947" i_stop="9785" i_length="839">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="9786" g_stop="9845" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="594" r_stop="653" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="9846" i_stop="10526" i_length="681">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="10527" g_stop="10577" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="654" r_stop="704" r_length="51" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E346366" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>704</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E346366" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7523" e_stop="7710"/>
          <exon e_start="8031" e_stop="8090"/>
          <exon e_start="8276" e_stop="8338"/>
          <exon e_start="8584" e_stop="8708"/>
          <exon e_start="8790" e_stop="8946"/>
          <exon e_start="9786" e_stop="9845"/>
          <exon e_start="10527" e_stop="10577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAACCATTTCGCTCGCTAGCAGCTCCAACTTACTAATCTACAAAGTTAAGGGTTATTTTACTCGTTGTATGGCTTCCTCAATGGTTGGGGCACAACCATCATTCTCAACACTAGCAATATCAACCAACGAACCTGTTGTTTCAGTTGACTGGCTCCATGCAAACATCAGAGACCCCGACTTAAAGGTTTCTGATCTTTTCAGTCTTAGCAGTCAAAATACTTGATAAAGAATAAGATGGTGATAGTATGGCCGTTATTACAACTGTCTAAACTACATTTGCTGCTCTAAATATTAAATCTGAAGTTGCATTTTTTGTTCACTCAACTCATGCCTATAAAAAGGACAATTCTTTTCCTTTTCTGTTCATTTCTATTTAGCAACACATTTGCACATGTTTTCTTTCTCTTCCAATTTTTCGGGTGGGGTGTGTGGTGCTGGTTGTATTATGTGAGGCATCTGTCAAATAGTACTGAGATTTTGTTTCTTTTTCCTATTCTTCTAAAGGTGTTAGATGCATCTTGGTACATGCCAGATGAGCAGAGAAATCCACTCCAGGAGTATCAGGTGCTGACTCCTGAGAAATTCTTTTCTGAATGACACTGCTTTATCTTGAATCACTGATTGCTTTCTAGAAAATATGTTCACAGATAAGCAATTTTCTTTTTCTCAGTCGCATTTATGGTAATTTTGTTCAACAGTCACTTTCATTCTGTTTTTCTGGTAGAATTTTCTAACTTCAACTAGAGCAGGTCGCTTGCATTCCTGGAGCACTATTCTTTGATATAGACGGAATAACTGATCGGACTACAAATGTGAGATATCTTCCCTGCTAAATTATTTCTCCTCTAGAAAGAGTGATTTTGCTCGACATAATCTTTGCAAATTACTAAACCTTCTCTGGTTTCAGTTTCTCTTCTTTGCAAATTATTTCTGTTTCATTTTTGTCCCATATATGTTTCTCCCTGTACTGTAATAGATGCTTCAGCTAGCCATCCTGCATGCTTTTGAGATAGATTTCATCATCTTTTATGATATAAAAGCTTTATTGATTTATCAGTTGCCACATATGTTGCCGTCTGAAGAAGCATTTGCAGCTGCTGTGTCTGCTCTTGGTATCAAGAACAAAGATGGGGTTGTTATATACGATGGCAAGGGCATTTTCAGTGCTGCCCGTGTTTGGTGGTGAGTTATTCAATTGATGATAAAAGGCGGTTAAGTTCATATTATGCAAAAGTGTCTAATCAATGGAATATGGGTAATCAGGATGTTTCGAGCTTTTGGACATGACAAAGTTTGGGTTTTGGATGGTGGCTTGCCAAGATGGCGTGCTTCAGGTTATGATGTCGAGTCACCTGGTGATGCCATTCTGAAAGCTAGTGTTGCCACTGAGGCAATTGAGAAAGTATACCAAGGACAGATGGTAAGATGAACATTTCTCAATTTCCTTTATCTCACTAAGCTTGTAGCCTTGTACATCTTTAAATAAAACAAGATTCCACAAGAATAGCACCTTTTGAAGCAATAGGGTGAGGTTCTCTAAGTTTTATTGTCTTCTCGGGACTTTTGCTGCATCGTTCCAAATAATGCTTAAGTAATGACTCTGTTGGTGCTTCTTGAATATCCGGAGGGCTCCACAGACTCATCTTGTTCATGTTATAACCGTTCATTATGTAAGGATGAACAACTTTTGTTTTTACCTCAAGTCAGACTATCTTAGATTCTTTTTCCCCTTAACCGATTTAAGAAATAATTCTCTCATTATGTTACTTAAATGAAAATCTATCCTTTTTATAAGTAAATTTACTGAAAAGTGAAAACAGTACCCAGGTGATGCAAAAATTACAGAGATGGACTTAAGAACTCCTAGTATATGCTTGAAGAGTCAATCAAGTCCATCATATTTGCTTGCTCCTTAATTGTATCCCCTCTGTTCCAAAAATACAAGTATTAAAGATAACTATACTTTACAAAAGTTTCAAGGAACTGTAGTTGTCTTCCATAGGATGCAGTGAATGATTTGATGTTTGACAAGTTCCCAATTCCTTAATTCTTTTTTTATTGGGGATGTATATGATGAAAATACCTTTTCAATCACACTTTGTCCACTTGGAATTTATGAATATAAAGTTGAAACATTAGTTTTTCTTGCTGTGTAGAACTTCTAGGTACATTTTCTTTCTCCCTCTCTTCGTATGTTCTGACGTTGTGCATTTAATGTTATATTGTTCAAATGTTTCTCTTAGAACCTTTAATGTGCAGGTTGGACCTTCTACCTTCCAGACCAAGTTTCAGCCTCATCTTGTCTGGAGTCTTGATCAGGTTGGTTTCCTTGATTGCTTTCTGCCGTACAACACTTGGTGGTGGTTGCATCTAGCCATGTATCATGAAGCTGATGGTAATGGCAAGGACTTTTTTTGGATTATTGACATTCAGGCGGTATTCAAAATCCAACTATTTAAAATTAGATTTTTTTTAAGAGAAAGGTAAGAGTAGTATTATGAAGTCTCCAGCACAAAGACTATGCTAGGAACAATATCTACTGTTCAAAAAGCAAAACAAAAGGTAAAACATGAACGACACTACAAGTGGACTGCAATTTAGTGGGTATTAGATTGTAAGTTTGTTGGTTGATATTTGTTACCCTTAGTGCAACTTTGTTCTGCAAAAATCTACCTCCGTTTCCCTGATTGACTGGTACAACTCTATGAAGTTTGTGAAGAAAATCTAGGAGGACTAGAACTATGACAATTGGAGGATGTTTTCTACAGAATATTTTGATCTGTTCGTGGATTCTGGTAATAGCTGCTCTTTGTGAAGGTTAATAGTTTGATGATTGTATGATAGTCCAATACTGGAAAAAAATGTGAACACAATCTTGTCACTTGACATAGGTCAGAAAGATTGGATCTTTCAATATATTCTCCATAAATGTATGTATTCTTATCAGAATACTTCTAGCTTGGCTATAGAAATGGAGATATGATTTCTGTATATTTTCAGGTTAAAAGGAACATTCAAGACCAGACATATCAGCATATAGATGCTCGATCC</genome_strand>
        <mrna_strand>AGGAAACCATTTCGCTCGCTAGCAGCTCCAACTTACTAATCTACAAAGTTAAGGGTTATTTTACTCGTTGTATGGCTTCCTCAATGGTTGGGGCACAACCATCATTCTCAACACTAGCAATATCAACCAACGAACCTGTTGTTTCAGTTGACTGGCTCCATGCAAACATCAGAGACCCCGACTTAAAG................................................................................................................................................................................................................................................................................................................................GTGTTAGATGCATCTTGGTACATGCCAGATGAGCAGAGAAATCCACTCCAGGAGTATCAG.........................................................................................................................................................................................GTCGCTTGCATTCCTGGAGCACTATTCTTTGATATAGACGGAATAACTGATCGGACTACAAAT.....................................................................................................................................................................................................................................................TTGCCACATATGTTGCCGTCTGAAGAAGCATTTGCAGCTGCTGTGTCTGCTCTTGGTATCAAGAACAAAGATGGGGTTGTTATATACGATGGCAAGGGCATTTTCAGTGCTGCCCGTGTTTGGTG.................................................................................GATGTTTCGAGCTTTTGGACATGACAAAGTTTGGGTTTTGGATGGTGGCTTGCCAAGATGGCGTGCTTCAGGTTATGATGTCGAGTCACCTGGTGATGCCATTCTGAAAGCTAGTGTTGCCACTGAGGCAATTGAGAAAGTATACCAAGGACAGATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGACCTTCTACCTTCCAGACCAAGTTTCAGCCTCATCTTGTCTGGAGTCTTGATCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAGGAACATTCAAGACCAGACATATCAGCATATAGATGCTCGATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E249260" ref_strand="+" ref_description="SGN-E249260 [cLEF-50-D24]">
      <seq>aaccatttcgctcgctagcagctccaacttactaatctacaaagttaaaggttattttactcgttgtatggcttcctcaatggttggggcacaaccatcattctcaacactagcaatatcaaccaacgaacctgttgtttcagttgactggctccatgcaaacatcagagaccccgacttaaaggtgttagatgcatcttggtacatgccagatgagcagagaaatccactccaggagtatcaagtcgcttgcattcctggagcactattctttgatatagacggaataactgatcggactacaaatttgccacatatgttgccgtctgaagaagcattttcagctgctgtgtctgctcttggtatcaagaacaaagatggggttgttatatacgatggcaagggcattttcagtgctgcccgtgtttggtggatgtttcgagcttttggacatgacaaagtttgggttttggatggtggcttgccaagatggcgtgcttcaagttatgatgtcgagtcacctggtgatgccattctgaaagctagtgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="7227" stop="9207"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7527" g_stop="7710" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7711" i_stop="8030" i_length="320">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="8031" g_stop="8090" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="244" r_length="60" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="8091" i_stop="8275" i_length="185">
            <donor d_prob="0.968" d_score="0.98"/>
            <acceptor a_prob="0.786" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="8276" g_stop="8338" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="307" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="8339" i_stop="8583" i_length="245">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="8584" g_stop="8708" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="432" r_length="125" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="8709" i_stop="8789" i_length="81">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="8790" g_stop="8907" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="550" r_length="118" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E249260" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249260" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7527" e_stop="7710"/>
          <exon e_start="8031" e_stop="8090"/>
          <exon e_start="8276" e_stop="8338"/>
          <exon e_start="8584" e_stop="8708"/>
          <exon e_start="8790" e_stop="8907"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCATTTCGCTCGCTAGCAGCTCCAACTTACTAATCTACAAAGTTAAGGGTTATTTTACTCGTTGTATGGCTTCCTCAATGGTTGGGGCACAACCATCATTCTCAACACTAGCAATATCAACCAACGAACCTGTTGTTTCAGTTGACTGGCTCCATGCAAACATCAGAGACCCCGACTTAAAGGTTTCTGATCTTTTCAGTCTTAGCAGTCAAAATACTTGATAAAGAATAAGATGGTGATAGTATGGCCGTTATTACAACTGTCTAAACTACATTTGCTGCTCTAAATATTAAATCTGAAGTTGCATTTTTTGTTCACTCAACTCATGCCTATAAAAAGGACAATTCTTTTCCTTTTCTGTTCATTTCTATTTAGCAACACATTTGCACATGTTTTCTTTCTCTTCCAATTTTTCGGGTGGGGTGTGTGGTGCTGGTTGTATTATGTGAGGCATCTGTCAAATAGTACTGAGATTTTGTTTCTTTTTCCTATTCTTCTAAAGGTGTTAGATGCATCTTGGTACATGCCAGATGAGCAGAGAAATCCACTCCAGGAGTATCAGGTGCTGACTCCTGAGAAATTCTTTTCTGAATGACACTGCTTTATCTTGAATCACTGATTGCTTTCTAGAAAATATGTTCACAGATAAGCAATTTTCTTTTTCTCAGTCGCATTTATGGTAATTTTGTTCAACAGTCACTTTCATTCTGTTTTTCTGGTAGAATTTTCTAACTTCAACTAGAGCAGGTCGCTTGCATTCCTGGAGCACTATTCTTTGATATAGACGGAATAACTGATCGGACTACAAATGTGAGATATCTTCCCTGCTAAATTATTTCTCCTCTAGAAAGAGTGATTTTGCTCGACATAATCTTTGCAAATTACTAAACCTTCTCTGGTTTCAGTTTCTCTTCTTTGCAAATTATTTCTGTTTCATTTTTGTCCCATATATGTTTCTCCCTGTACTGTAATAGATGCTTCAGCTAGCCATCCTGCATGCTTTTGAGATAGATTTCATCATCTTTTATGATATAAAAGCTTTATTGATTTATCAGTTGCCACATATGTTGCCGTCTGAAGAAGCATTTGCAGCTGCTGTGTCTGCTCTTGGTATCAAGAACAAAGATGGGGTTGTTATATACGATGGCAAGGGCATTTTCAGTGCTGCCCGTGTTTGGTGGTGAGTTATTCAATTGATGATAAAAGGCGGTTAAGTTCATATTATGCAAAAGTGTCTAATCAATGGAATATGGGTAATCAGGATGTTTCGAGCTTTTGGACATGACAAAGTTTGGGTTTTGGATGGTGGCTTGCCAAGATGGCGTGCTTCAGGTTATGATGTCGAGTCACCTGGTGATGCCATTCTGAAAGCTAGTGTT</genome_strand>
        <mrna_strand>AACCATTTCGCTCGCTAGCAGCTCCAACTTACTAATCTACAAAGTTAAAGGTTATTTTACTCGTTGTATGGCTTCCTCAATGGTTGGGGCACAACCATCATTCTCAACACTAGCAATATCAACCAACGAACCTGTTGTTTCAGTTGACTGGCTCCATGCAAACATCAGAGACCCCGACTTAAAG................................................................................................................................................................................................................................................................................................................................GTGTTAGATGCATCTTGGTACATGCCAGATGAGCAGAGAAATCCACTCCAGGAGTATCAA.........................................................................................................................................................................................GTCGCTTGCATTCCTGGAGCACTATTCTTTGATATAGACGGAATAACTGATCGGACTACAAAT.....................................................................................................................................................................................................................................................TTGCCACATATGTTGCCGTCTGAAGAAGCATTTTCAGCTGCTGTGTCTGCTCTTGGTATCAAGAACAAAGATGGGGTTGTTATATACGATGGCAAGGGCATTTTCAGTGCTGCCCGTGTTTGGTG.................................................................................GATGTTTCGAGCTTTTGGACATGACAAAGTTTGGGTTTTGGATGGTGGCTTGCCAAGATGGCGTGCTTCAAGTTATGATGTCGAGTCACCTGGTGATGCCATTCTGAAAGCTAGTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E251090" ref_strand="+" ref_description="SGN-E251090 [cLEG-17-B5]">
      <seq>caagtttcagccttatcttgtctggagtcttgatcaggttggtttccttgattgctttctgccgtacaacacttggtggtggttgcatctagccatgtatcatgaagctgatggtaatggcaaggactttttttggattattgacattcaggcggtattcaaaatccaactatttaaaattagattttttttaagagaaaggtaagagtagtattatgaagtctccagcacaaagactatgctaggaacaatatctactgttcaaaaagcaaaacaaaaggtaaaacatgaacgacactacaagtggactgcaatttagtgggtattagattgtaagtttgttggttgatatttgttacccttagtgcaactttgttctgcaaaaatctacctccgtttccctgattgactggtacaactctatgaagtttgtgaagaaaatctatgaggactagaactatgacaattggaggatgttttctacagaatattttgatctgttcgtggattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="9509" stop="10619"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9809" g_stop="10319" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="511" r_length="511" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E251090" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E251090" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9809" e_stop="10319"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGTTTCAGCCTCATCTTGTCTGGAGTCTTGATCAGGTTGGTTTCCTTGATTGCTTTCTGCCGTACAACACTTGGTGGTGGTTGCATCTAGCCATGTATCATGAAGCTGATGGTAATGGCAAGGACTTTTTTTGGATTATTGACATTCAGGCGGTATTCAAAATCCAACTATTTAAAATTAGATTTTTTTTAAGAGAAAGGTAAGAGTAGTATTATGAAGTCTCCAGCACAAAGACTATGCTAGGAACAATATCTACTGTTCAAAAAGCAAAACAAAAGGTAAAACATGAACGACACTACAAGTGGACTGCAATTTAGTGGGTATTAGATTGTAAGTTTGTTGGTTGATATTTGTTACCCTTAGTGCAACTTTGTTCTGCAAAAATCTACCTCCGTTTCCCTGATTGACTGGTACAACTCTATGAAGTTTGTGAAGAAAATCTAGGAGGACTAGAACTATGACAATTGGAGGATGTTTTCTACAGAATATTTTGATCTGTTCGTGGATTC</genome_strand>
        <mrna_strand>CAAGTTTCAGCCTTATCTTGTCTGGAGTCTTGATCAGGTTGGTTTCCTTGATTGCTTTCTGCCGTACAACACTTGGTGGTGGTTGCATCTAGCCATGTATCATGAAGCTGATGGTAATGGCAAGGACTTTTTTTGGATTATTGACATTCAGGCGGTATTCAAAATCCAACTATTTAAAATTAGATTTTTTTTAAGAGAAAGGTAAGAGTAGTATTATGAAGTCTCCAGCACAAAGACTATGCTAGGAACAATATCTACTGTTCAAAAAGCAAAACAAAAGGTAAAACATGAACGACACTACAAGTGGACTGCAATTTAGTGGGTATTAGATTGTAAGTTTGTTGGTTGATATTTGTTACCCTTAGTGCAACTTTGTTCTGCAAAAATCTACCTCCGTTTCCCTGATTGACTGGTACAACTCTATGAAGTTTGTGAAGAAAATCTATGAGGACTAGAACTATGACAATTGGAGGATGTTTTCTACAGAATATTTTGATCTGTTCGTGGATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E276325" ref_strand="+" ref_description="SGN-E276325 [cLEN-21-D10]">
      <seq>gcacgaggaagtctccagcttaaagactatgctagtatacaatatctactgtgcaaaaagcaaaacggaaggttaaacatgaacgacactacaagtggactgcaatttagtgggtattagattgtaagtttgttggttgatatttgttacccttagtgcaactttgttctgcaaaaatctacctccgtttccctgattgactggtacaactctatgaagtttgtgaagaaaatctaggaggactagaactatgacaattggaggatgttttctacagaatattttgatctgttcgtggattctggtaatagctgctctttgtgaaggttaatagtttgatgattgtatgatagtccaatactggaaaaaaatgtgaacacaatcttgtcacttgacataggttaaaaggaacattcaagaccagacatatcagcatatagatgctcgatccaaagctaggtttgatggtgttgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="9719" stop="10887"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10019" g_stop="10417" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="400" r_length="400" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10418" i_stop="10526" i_length="109">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10527" g_stop="10585" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="459" r_length="59" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E276325" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E276325" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10019" e_stop="10417"/>
          <exon e_start="10527" e_stop="10585"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATTATGAAGTCTCCAGCACAAAGACTATGCTAGGA-ACAATATCTACTGTTCAAAAAGCAAAACAAAAGGTAAAACATGAACGACACTACAAGTGGACTGCAATTTAGTGGGTATTAGATTGTAAGTTTGTTGGTTGATATTTGTTACCCTTAGTGCAACTTTGTTCTGCAAAAATCTACCTCCGTTTCCCTGATTGACTGGTACAACTCTATGAAGTTTGTGAAGAAAATCTAGGAGGACTAGAACTATGACAATTGGAGGATGTTTTCTACAGAATATTTTGATCTGTTCGTGGATTCTGGTAATAGCTGCTCTTTGTGAAGGTTAATAGTTTGATGATTGTATGATAGTCCAATACTGGAAAAAAATGTGAACACAATCTTGTCACTTGACATAGGTCAGAAAGATTGGATCTTTCAATATATTCTCCATAAATGTATGTATTCTTATCAGAATACTTCTAGCTTGGCTATAGAAATGGAGATATGATTTCTGTATATTTTCAGGTTAAAAGGAACATTCAAGACCAGACATATCAGCATATAGATGCTCGATCCAAAGCTAG</genome_strand>
        <mrna_strand>GCACGAGGAAGTCTCCAGCTTAAAGACTATGCTAGTATACAATATCTACTGTGCAAAAAGCAAAACGGAAGGTTAAACATGAACGACACTACAAGTGGACTGCAATTTAGTGGGTATTAGATTGTAAGTTTGTTGGTTGATATTTGTTACCCTTAGTGCAACTTTGTTCTGCAAAAATCTACCTCCGTTTCCCTGATTGACTGGTACAACTCTATGAAGTTTGTGAAGAAAATCTAGGAGGACTAGAACTATGACAATTGGAGGATGTTTTCTACAGAATATTTTGATCTGTTCGTGGATTCTGGTAATAGCTGCTCTTTGTGAAGGTTAATAGTTTGATGATTGTATGATAGTCCAATACTGGAAAAAAATGTGAACACAATCTTGTCACTTGACATAG.............................................................................................................GTTAAAAGGAACATTCAAGACCAGACATATCAGCATATAGATGCTCGATCCAAAGCTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E276299" ref_strand="+" ref_description="SGN-E276299 [cLEN-21-O6]">
      <seq>agtctccagcacaaagactatgctaggaacaatatctactgttcaaaaagcaaaacaaaaggtaaaacatgaacgacactacaagtggactgcaatttagtgggtattagattgtaagtttgttggttgatatttgttacccttagtgcaactttgttctgcaaaaatctacctccgtttccctgattgactggtacaactctatgaagtttgtgaagaaaatctaggaggactagaactatgacaattggaggatgttttctacagaatattttgatctgttcgtggattctggtaatagctgctctttgtgaaggttaatagtttgatgattgtatgatagtccaatactggaaaaaaatgtgaacacaatcttgtcacttgacataggttaaaaggaacattcaagaccagacatatcagcatatagatgctcgatccaaagctaggtttgatggtgttgcaccagagcctcgaaaaggaattaacagtggacatgtacccgggagcaagtgtattccttttccacagatgttggatggctcacagacactcttatcccgtgaagagctcgagaaaaaatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="9728" stop="18616"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10028" g_stop="10417" g_length="390"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="390" r_length="390" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10418" i_stop="10526" i_length="109">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="10527" g_stop="10585" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="449" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="10586" i_stop="15364" i_length="4779">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15365" g_stop="15446" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="450" r_stop="531" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="15447" i_stop="18261" i_length="2815">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="18262" g_stop="18316" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="532" r_stop="586" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E276299" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E276299" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10028" e_stop="10417"/>
          <exon e_start="10527" e_stop="10585"/>
          <exon e_start="15365" e_stop="15446"/>
          <exon e_start="18262" e_stop="18316"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCTCCAGCACAAAGACTATGCTAGGAACAATATCTACTGTTCAAAAAGCAAAACAAAAGGTAAAACATGAACGACACTACAAGTGGACTGCAATTTAGTGGGTATTAGATTGTAAGTTTGTTGGTTGATATTTGTTACCCTTAGTGCAACTTTGTTCTGCAAAAATCTACCTCCGTTTCCCTGATTGACTGGTACAACTCTATGAAGTTTGTGAAGAAAATCTAGGAGGACTAGAACTATGACAATTGGAGGATGTTTTCTACAGAATATTTTGATCTGTTCGTGGATTCTGGTAATAGCTGCTCTTTGTGAAGGTTAATAGTTTGATGATTGTATGATAGTCCAATACTGGAAAAAAATGTGAACACAATCTTGTCACTTGACATAGGTCAGAAAGATTGGATCTTTCAATATATTCTCCATAAATGTATGTATTCTTATCAGAATACTTCTAGCTTGGCTATAGAAATGGAGATATGATTTCTGTATATTTTCAGGTTAAAAGGAACATTCAAGACCAGACATATCAGCATATAGATGCTCGATCCAAAGCTAGGTACTTCATCATGTCTGCAAACCCATATTTTAAAATGTGATTGACTAATATGCTAAGCTATTTGTTCAACAACACTCACATGATGAGGAGAGTAGATTTTATTTGTCAATTATCTTTTGAAGCAGTTATAACCCTTGTGAATTTACTTTTTAGATTTTACTTCTCCCTCCTAATTTATGCGACACATTAAGTCAGAAAATGTTTGGCACATGTTATGAATAATAGTGATGTTCAATTTGACCATTCTATACTCTTAAGAGTTCAACTTCAAACTCAAATAATGAGGTTATGCTTTCCTTTGCAACAGTTAGCTCTATAGCAAGTCAAATTGTCTTTGTGCCTTGTTAAATATGTCGTTTGATTAGAGAGTAATATCTTTTGGCATGTCTTGTCATCTATAGGGCCTTGTTGGATGCTTTCCTTACAAACAATTAGTTCAATATGCTAGTCAAAGAGAGGCTGCTGTCTTGTTGTATGGTTAGAAAGGTCGGAGTAATAAATTTTGGCACATCTTGGGATTTAGATAGTTAGATTGCCGTTATATGAATATGTATTTCTTTCTTATGCTACATTATCTTTAGGACATGTAGACAGAAACTTCTTCTCCTAAAGTGAAATGTTGGCATAGCCAACTTTAACATTTTGTAATGGCTGCAATTGATGTGCCTTAGTGAGCAGGAAAACTTAGATAAACATTATTAGTGGTTACCATCGAGAAAGGATGGAATCTGAAAATGTTGCAATTATATCTTTCCTGACAACTCTCAAGTTTACCACAGTCATGAAGTCATGAGTTATTAGGGACCACTCATTACATAATGTGTGAAAGGCTAATTGGGGTGCTTATATATTTTTTCTTTATACAACATAACGTGTGATCTGGAGAGGGTAGAGTGCACACAGACTTTATCCCTGCCTTGAGAAGGTAGATATGTTGTTTCCGATAGACCCTCGACTCATGTAAAACATTTCAAAGCAGTTTAAAAAGGGAAAACAATAGTAAAGTAGACATATCAAATAGGGAAAGCATTACTTAACATTCAAAAAAAGGAAAAGTAGCAATAGCAAAATAATGTGACAAACAAGGTACTAGAAATAACAGGCAGCAGTAGAAGTCACAGGGCTAGGAACTACGAGAACAGATACTAATACTACTAGAATGAGAGGAGAACAAGTACACTTCTCTACACTACCACCAAGCCTTTCCTGCAGGAATGCGAGACAATACTTAATTACCTACTAATATCTACCCTAATCCATGATTTCCATAATTTCTATTTAAAGTCATTCCTCGGTGAGCTAAAGATGCATCATGTTATGTCCAATAACCTCTCTCTAATACTTTTTTGGTCTACTTCTTCTTGAACCCAACATTGCCAACCTTTCACACCTCCTAAATAGAGTATTTGTGCATTTCCTCTTCACATGTCTTCATCATTTTAGCCTCGTTTCTCTTATCTTATCCACACGGGCCACTCCCATCTTGTTTTAGATGTTCTCATTCCTAATCTTATCTCTCTAAATATGCCCACACATCAAGCACAACATCTTCATTTTCGCACCTCACATCTTCTGGACACGTGAGTTCTTAACTGACCAACAATCTGCCCCATAAAACAGTAGGCCTAACTACCGCTCGATAGAACTTGCCTTTAAGTTTTGGTGGTGTATTTTTATCACACAAGACTCTAGAAGCGAGCCTCTATTTTGTCATTCAACACCAATACGAAGTGTGAGATCATCGTTGATGTCTCATTCTTTTGGATTAAACAACAATAACAACACACCCATTGTAATCCCATAAAGTAGGGTCAGGTAGAGTGTACGAAAACTTTACCCCTACCTTGGAGGTAGAGAATCTATTTCCAATAGATCCTCAGCTCAAGAAAAAATGGTTCAAAGTAGTATGAAATAGTAAATGACAGAAGTGAGAAACTATGACAAATCATTCTAAACAGTGGCTACAATTGAATAATACAACAATTGTTGAAGAGTCCCACATCAGATTAAAAAAGGACATGTGGTCTCTTTATAGGCTTGAGCAATCCTTCCTTTGAGCTAGCTTTTGGGGTTTGAGTTAAGCCCAAAACTTAATTTAACATGGTATCAAATCAGAATCCATCTCAATTAATGTTTACTGATGATAAGCCTATAAATTAGATTGTCCACACACCAGATGTCCAATCCTAGGCGAAGAGTCCCAAGAGCTATTCTTCATTTTCTTCCAGATCTCTAAATGTATTACCAAAACTAGGAGCTTATGTTGGTTCATAAGCGTCTCACCCGGGATGACTTTGTAGTCTTTACAAAGACCTTTATCAACTTTCTTAGGGGGAAAAATAGTCTATTTGTCTTGCCCAATGTACTGTGGAACTTACCAAGTTCTCCTCCTTATTTGAGAAACTCAAACTGGCTACCCCAACCTAAAGGCTCCTGCATAATCTAGAAGTGAGCCTTTTCTTTTTCCTGTTCCCGGAACCGAAACCTCTATGCACTTGTCATAGCCCCGTGGAGTTGACCCGATTTGTCCATTAAAATCTCCTCATACGGATAACTTCTCAGTGAACGATATATCTTCCATTACCTTGTCAAAATCAGTTCTTGTCCGTTTTGCCCAAGCCCGCTTGTGGTGTGCATGGACTAACGATGTTCAAAGTGGACCCTCCAATGACTAATTTAATCGTTATCATCTTGTCGTTGATTCTCCAAACCTCTACCACTTGCTCCCTTATTTCTCTATCTATTAAGAATCCTACTCCATTTGTATTACTCAAGACTACTAAGTACCAAAATTTGTACTTGTCCACATCTAACGCCTTAGTACCTACCCATATGGTCTCCTAGGCACTAGCTACACATCTTCCTCTTTTTGAGAATCTTCATTAGTTTATGGACTTCCCCATTAAAGTCCCTATGTTCCAAGACCCCAATCTCAGCCTAGAAGATCCCATAACCCACTTACCATCCCTGACCCTAGCCTCTGTCCCCGACTGAGAAAATAACTAATCAAGGGCTTACATCAAAATGAGCAGGAATCAATACTCAAGAGTAAAGACAGAGTAAGAATCCAAGGACCAAAGTCAATAAGGCAGGAGCTGAAGCACAATTGAGCAAGAATTTAAAGACGAGTACAACTAATAAGACAAGAATGGTAGCACTAACGGCTGAGAGAATTGTACACAAGAATTACTAGGGCAGGATCAAAGCACAAGCAAGCAAGGATCTAAAGGCAAGAATTTCTATAAGACAAGGATGATTTCACCCGAATACAAACCTTTGATATTTGGAACTTCTTCTCTTGGGGATGACCTGCTTATCAAGCCTCACTTCTACGCCAACCTCTTGTGTCTCATCACTGAACTTGCAGTATAAGCACTCCTTTGGGGTCCCACTCAACCTGGACCCTTTAGACTCTAAGATTCGTGTCCAAACTTCCAGCCTACTGTTAACTCCATTGCGTGTCTGGTCAATCAGTACTATGTCATTTGCCAATAACATTCACAATGGCACCTTTCCTTGGATATGACGTGTCAACTCATCCAACACCAACAACACAAATAGAAACAGGCTTAGAGCGGATCTCTGGTGCAACCCCATTATGACTTAGAAGTGTTCTAAGTCTTCTTCCAGTGTTCTTACCGGCTTGGCTATTGTACATGTTCTGAATCACTCTACTGTATGCCACCGATACACTTCTAACCTCCAAACACCTCCATAGAACCTCTCTTGGGACTTCATCATAAGTCTTTTCTAGGTCAATGAACACCACAGGTATGTCCTTATCCAAATGAGCCCATTAACTCTACAAAATGCAAAACCTCAACTTTTTCATGTAAGAAACTAAGATGCCTATGATGCCAAGTATAATCAGAATTTTTTACTATACTCTTCCAGATGTCACAGCTTGCGGACCCAGTTAAGAGCCATTTGATTGCTTGATATGCATTGACATGTATGTGCATAAGATTTAGAAAGAAAAACCACTTCTCTTTATATTTTAAGAATATTACTAGTTTCGTTCTTTGTGTGATGTCAAGGAGCAATTCTCACATTAACTTCTTTGTAGGATTTCTTCCCTTTGTGGTGTCAGTTCCTTGTTTACGAATAAATAAGGATTGATATATTCTGTTCATAGGTACTTGTATGATGATGGTCTAGGAAAAAATCATCTGTTCTAGAATAGTGTTTACAGGGTAGGGCATATTTACATTTTCAAGTTGTTTTGGTGAAGTTACGCTCTTAGTCATTATTATTTCAAGAACTGCAATTGTTTTGTATAGTCATTCCCGTTACGAGTGGCTTCTGTCCAAGAACGAGTAGTTGTGCATATCTTCTTTTCCCAATAAATTACAATACAAACACTGCTCTCTGCAGGTTTTGAGTTTAAAAAGCTATGTAAATGTGGTACCTATACTCTACATACTTAAGATATGATGTTGAGGAGAAATAGTTTTTTAATTTGGATATTTAAAGATGGGCGTAATCTTCCTCTATGAGCGAGACGCCATCCAAATCTTCCACTCCTTGGGCGAGGCCTTCTGTTCTATGAACACCCCATCACTGAATGATTCACTTTCAAATTCTCGCTGTAAATACCCGGTCGTAAAATTAGGAAAAAACTTTGACTAAGAAGAGGTAATAGAGGGAATAAATTTATCAACTGCAGCAAACTGAAGCAACTGTAATTGGTTAATGTGTAAATTTTCTAGAGTTCAAATGCAAGCTTAATTTTTTTCATAGAGTTAAGTTATCTGGATTTTTGTTTTGCAACTGTTTTAGGTTTGATGGTGTTGCACCAGAGCCTCGAAAAGGAATTAACAGTGGACATGTACCCGGGAGCAAGTGTATTCCTTTTCCACAGGTGAGGATCTGTGCATTGAAGAAAAAAAACGATTTTTCAATATTCTATGGCAGTTTTCCTGTTTCATCTCCTGTATAAAAACATTTCCTGCTTTCAAATGAAGATATGGTGAAGTATTTCTGTTTGAATAGGTTAAACTATTTGTCTCATATTTCCACTGTGCTTGATGCTCCTTGACCATGGATAATTTACTTCCAGTCATTGATATCATCTGGACTACCGAGTGCATGACAATATAAGTTTCTAACAGTTGACAATGATCAAAACCATGAGCTTGTACTAAGTTTGATGCATTTTGCTTAAAACCTTGTAACAGAATGTTAAGGCCCAAATTATGAAATTTCAATACTATGCCTCTCAGAGATGCAAGTCACAAAAATGAATGTGAAAATGCTCTCAGGCACAGTTATTGAGGTCAGAAAAGACTTGTTCTTTTCCAGCCGTTTGTAAAGTTTCTGGCATCTTTACAGTTATTCGTTAATCACATTCATCAGTTATTACTACAAAAATTGGTATAGATTCAACATGTGTGGGGAAGGTTTGGTTTGAATGGGTGGAATAAAACAGAAGGTTGATGTGCGGAGCTACTTTTAGTAGAAAAACCATGGAGTTATTGTGCTTTGTTTTATGGGAGGTATCAAGACATTCTGATATGCATGGCCGGAGATGGAAACTAAACGAACATCATTCAAGTTACTTTGTATACACTATTAAACGAATCTGGTTTAAGATTGATCCAACAGCCTATGCCAGTTAAAGTGATGGGGTAACAAATATTTCAATTAGGCTCAGTTTTATTTACCGAGTCCCAGCTCTTTAAACCAAACCATTTTACTATGGTCGGTTTATAATAAAATGGGACCAATCTTTGTGGAGATTGAAGCAAATAAATCAGTCCTTGGTAACTCCAAATGCAGCTCTGGAAAGAGAAAAACAGCAGGAGTTTTGAAAATTGGCATAATAGCTTACAGAAGATCAAGATGGATGCTTAGCTCTTTTCTATTTTTGGTGTAAACAAGATATTAACTAGGACAGAAAATATCTTTGATGTGCTAGATTGTTCATAGGTAGCAGTTTAGACTAAGACTATTTTATTCGAGAAAATGGTTTAGAACCCCCCTAATTTATATCTGAAATCTCAACTACACACTTATTCATTACGAAAGTCCCATTACACTATTTTAAAGTAGAATTATTTGCTCCCTGGATGATAATGTGGCAAGGTAAGTGTAGGACACTCTCTCAAAGAGAGTGAGAGGTAAAAATACTAATTAAAACTTTAGATTTTAAAAATATTTCTTAAATTTATATTATAATTTTTTTATTCTTCAAAAATCTTTTGTTTCTTTTTTTAAAAAAATTATTTTTTATGGTCTTTCTTCTTCTCTTTACCAAAGCTACATCGGCGGCGGTTCTGCTCCACCACCAAGTCGGCGCCCTCACCGACTCTAATCATTAAGTTAACTCTTTTTTTTCAAATCACAAATTTCTCACAGTTAGTGTGAAAAATTGACAAGAACTGAAAATCGAAATCGAAAGTCAAGAGGATCGAACTTTAAAGTTATTAATGGAGAAAAATTCATCAAGTTACAGATCCATCGATGGAGAAGAACTCATCAACAAAATCATTAGGTAACAAACCCATTTATGAAAAAGACCCAATAATCGAAATGAGTTGCTGAACATTGTTAAATTCTAGCTTCAATACAAATCATCAAAAATTTTCTTGTGCTCATAACTCCAATGAGGCTCGAAGAAGATGGTGGCAGTCATATAAAGTATCTCCAAATCTGAAAAATTTGTTGTCGAGATTAAAGAAAAAGATGAATGGAAAAGGAAAGTGAATCAAAGAAGAAGAGGAATGGAAAAAGGAAAGTGAAAGAGAAAGATGAAAATATAGATGAAAAAATATTGCAGCATAAAGTTTTTTTGTTTTTTTTTAAAAAATGGTTAGATTACGTGGCTGAGCGCATGAGATTCATTATTTCATATAAATCTGGTTGTGTTTTTAAGGGGTATATATTTTACTTTTAAAATGTTCTGGGGGGTAATAGAACTCCCGTAATGAATAAGTGTGTAGTTGGAATATCGGGTATAGTAGATTAGGGGGGTTTTAGACCATTTTCTCATTTTATTCTGTTATTTGTAAAACTTTTGAAGGGGAACTACACTGTTGTTATAGTATACCTGTGGATATATAGACTAAAGTTATCAGTTTAAAAAAAAAAAAGATTCCTTGTAAGAGAAGCAAGGATGGTAGTTATTTTTGGGTCCTTAGATGTAACACTCATATATTTGGTTTCCAGAACAATCTTTGATGATTTATATACTGATCTTGTTATATTCTCAAAAAAGAAAAAAAATCAACTCTTCTCTGGTCTTCCAAGAATCATTTTGGGCATATTGGCTCTTGGATCCTACACTGATGCCTTCGTCTGCCTGCAAAGATTCTTGAAAACTGAGGCATTCTCATCTCTTTGTCCCCTTATGCTTGACTTTGCGCCTAAGCCCTGGAAAACCTAGTGTGTGTAGTACCTGTTCAGTTTATTAGCTTCTATCTACTCTTTGATGATTTATGTAGAGACTATCTGGTTGAAGCTCTGAAATAACCTTGGGTAGTCATCATCATCAGTATGAGAGTGTGAAACAATAAATGAGCTTTACATGTTTTGCCTGTATTTCCTTGTTTCAAAGCTTAATCCCTACTGAGTAATTCCTAGATCAAGTTCTGTAGCTGTGATAGATTCAAATCTATTTTTTTTTTTTAAAAAAAATCAAATATTCAAATCTATATGTTTGTGGTGATTCTTATCAGATGTTGGATGGCTCACAGACACTCTTATCCCGTGAAGAGCTCGAGAAAAAATTTG</genome_strand>
        <mrna_strand>AGTCTCCAGCACAAAGACTATGCTAGGAACAATATCTACTGTTCAAAAAGCAAAACAAAAGGTAAAACATGAACGACACTACAAGTGGACTGCAATTTAGTGGGTATTAGATTGTAAGTTTGTTGGTTGATATTTGTTACCCTTAGTGCAACTTTGTTCTGCAAAAATCTACCTCCGTTTCCCTGATTGACTGGTACAACTCTATGAAGTTTGTGAAGAAAATCTAGGAGGACTAGAACTATGACAATTGGAGGATGTTTTCTACAGAATATTTTGATCTGTTCGTGGATTCTGGTAATAGCTGCTCTTTGTGAAGGTTAATAGTTTGATGATTGTATGATAGTCCAATACTGGAAAAAAATGTGAACACAATCTTGTCACTTGACATAG.............................................................................................................GTTAAAAGGAACATTCAAGACCAGACATATCAGCATATAGATGCTCGATCCAAAGCTAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGATGGTGTTGCACCAGAGCCTCGAAAAGGAATTAACAGTGGACATGTACCCGGGAGCAAGTGTATTCCTTTTCCACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTGGATGGCTCACAGACACTCTTATCCCGTGAAGAGCTCGAGAAAAAATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E342933" ref_strand="+" ref_description="SGN-E342933 [cTOF-11-I2]">
      <seq>tcgtgtccaaacttccagcctactgttaactccattgcgtgtctggtcaatcagtactatgtcatttgccaataacattcacaatggcacctttccttggatatgacgtgtcaactcatccaacaccaacaacacaaatagaaacaggcttagagcggatctctggtgcaaccccattatgacttagaagtgttctaagtcttcttccagtgttcttaccggcttggctattgtacatgttctgaatcactctactgtatgccaccgatacacttctaacctccaaacacctccatagaacctctcttgggacttcatcataagtcttttctaggtcaatgaacaccacaggtatgtccttatccaaatgagcccattaactctacaaaatgcaaaacctcaactttttcatgtaagaaactaagatgcctatgatgccaagtataatcagaattttttactatactcttccagatgtcacagcttgcggacccagttaagagccatttgattgcttgatatgcattgacatgtatgtgcataagatttagaaagaaaaaccacttctctttatattttaagaatattactagtttcgttctttgtgtgatgtcaaggagcaattctcacattaacttctttgtaggatttcttcccttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="13706" stop="14965"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14006" g_stop="14665" g_length="660"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="660" r_length="660" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E342933" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342933" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14006" e_stop="14665"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTGTCCAAACTTCCAGCCTACTGTTAACTCCATTGCGTGTCTGGTCAATCAGTACTATGTCATTTGCCAATAACATTCACAATGGCACCTTTCCTTGGATATGACGTGTCAACTCATCCAACACCAACAACACAAATAGAAACAGGCTTAGAGCGGATCTCTGGTGCAACCCCATTATGACTTAGAAGTGTTCTAAGTCTTCTTCCAGTGTTCTTACCGGCTTGGCTATTGTACATGTTCTGAATCACTCTACTGTATGCCACCGATACACTTCTAACCTCCAAACACCTCCATAGAACCTCTCTTGGGACTTCATCATAAGTCTTTTCTAGGTCAATGAACACCACAGGTATGTCCTTATCCAAATGAGCCCATTAACTCTACAAAATGCAAAACCTCAACTTTTTCATGTAAGAAACTAAGATGCCTATGATGCCAAGTATAATCAGAATTTTTTACTATACTCTTCCAGATGTCACAGCTTGCGGACCCAGTTAAGAGCCATTTGATTGCTTGATATGCATTGACATGTATGTGCATAAGATTTAGAAAGAAAAACCACTTCTCTTTATATTTTAAGAATATTACTAGTTTCGTTCTTTGTGTGATGTCAAGGAGCAATTCTCACATTAACTTCTTTGTAGGATTTCTTCCCTTT</genome_strand>
        <mrna_strand>TCGTGTCCAAACTTCCAGCCTACTGTTAACTCCATTGCGTGTCTGGTCAATCAGTACTATGTCATTTGCCAATAACATTCACAATGGCACCTTTCCTTGGATATGACGTGTCAACTCATCCAACACCAACAACACAAATAGAAACAGGCTTAGAGCGGATCTCTGGTGCAACCCCATTATGACTTAGAAGTGTTCTAAGTCTTCTTCCAGTGTTCTTACCGGCTTGGCTATTGTACATGTTCTGAATCACTCTACTGTATGCCACCGATACACTTCTAACCTCCAAACACCTCCATAGAACCTCTCTTGGGACTTCATCATAAGTCTTTTCTAGGTCAATGAACACCACAGGTATGTCCTTATCCAAATGAGCCCATTAACTCTACAAAATGCAAAACCTCAACTTTTTCATGTAAGAAACTAAGATGCCTATGATGCCAAGTATAATCAGAATTTTTTACTATACTCTTCCAGATGTCACAGCTTGCGGACCCAGTTAAGAGCCATTTGATTGCTTGATATGCATTGACATGTATGTGCATAAGATTTAGAAAGAAAAACCACTTCTCTTTATATTTTAAGAATATTACTAGTTTCGTTCTTTGTGTGATGTCAAGGAGCAATTCTCACATTAACTTCTTTGTAGGATTTCTTCCCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E392059" ref_strand="+" ref_description="SGN-E392059 [TUS-24-J1](-)">
      <seq>atggtgttgcaccagagcctcgaaaaggaattaacagtggacatgtacccgggagcaagtgtattccttttccacagatgttggatggctcacagacactcttatcccgtgaagagctcgagaaaaaatttggtcaagaaggtatctctttggacaagcctatagttgcctcttgtggcacaggtgtaactgcttgcgtacttgtcttgggcctccatcgactggggaagactgacattccagtctatgatggttcatggacagaatgggcaacacagccagatacacctctctgcacatctgaaagatgaagacgtttgtatggcctgcctagtttttatgggtgagcaatgatgattgtgaatctagatctggttccttttcttaatggttagtgcaacaacttacattgtattgttgaatgataacaacggaaaaatttcttctctgttgtacaaaatgccttaattttaccttcattaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="15070" stop="19605"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15370" g_stop="15446" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15447" i_stop="18261" i_length="2815">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18262" g_stop="18325" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="141" r_length="64" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18326" i_stop="18830" i_length="505">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18831" g_stop="18898" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="209" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="18899" i_stop="19030" i_length="132">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="19031" g_stop="19302" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="481" r_length="272" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="482" polyA_stop="493"/>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E392059" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392059" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15370" e_stop="15446"/>
          <exon e_start="18262" e_stop="18325"/>
          <exon e_start="18831" e_stop="18898"/>
          <exon e_start="19031" e_stop="19302"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGTGTTGCACCAGAGCCTCGAAAAGGAATTAACAGTGGACATGTACCCGGGAGCAAGTGTATTCCTTTTCCACAGGTGAGGATCTGTGCATTGAAGAAAAAAAACGATTTTTCAATATTCTATGGCAGTTTTCCTGTTTCATCTCCTGTATAAAAACATTTCCTGCTTTCAAATGAAGATATGGTGAAGTATTTCTGTTTGAATAGGTTAAACTATTTGTCTCATATTTCCACTGTGCTTGATGCTCCTTGACCATGGATAATTTACTTCCAGTCATTGATATCATCTGGACTACCGAGTGCATGACAATATAAGTTTCTAACAGTTGACAATGATCAAAACCATGAGCTTGTACTAAGTTTGATGCATTTTGCTTAAAACCTTGTAACAGAATGTTAAGGCCCAAATTATGAAATTTCAATACTATGCCTCTCAGAGATGCAAGTCACAAAAATGAATGTGAAAATGCTCTCAGGCACAGTTATTGAGGTCAGAAAAGACTTGTTCTTTTCCAGCCGTTTGTAAAGTTTCTGGCATCTTTACAGTTATTCGTTAATCACATTCATCAGTTATTACTACAAAAATTGGTATAGATTCAACATGTGTGGGGAAGGTTTGGTTTGAATGGGTGGAATAAAACAGAAGGTTGATGTGCGGAGCTACTTTTAGTAGAAAAACCATGGAGTTATTGTGCTTTGTTTTATGGGAGGTATCAAGACATTCTGATATGCATGGCCGGAGATGGAAACTAAACGAACATCATTCAAGTTACTTTGTATACACTATTAAACGAATCTGGTTTAAGATTGATCCAACAGCCTATGCCAGTTAAAGTGATGGGGTAACAAATATTTCAATTAGGCTCAGTTTTATTTACCGAGTCCCAGCTCTTTAAACCAAACCATTTTACTATGGTCGGTTTATAATAAAATGGGACCAATCTTTGTGGAGATTGAAGCAAATAAATCAGTCCTTGGTAACTCCAAATGCAGCTCTGGAAAGAGAAAAACAGCAGGAGTTTTGAAAATTGGCATAATAGCTTACAGAAGATCAAGATGGATGCTTAGCTCTTTTCTATTTTTGGTGTAAACAAGATATTAACTAGGACAGAAAATATCTTTGATGTGCTAGATTGTTCATAGGTAGCAGTTTAGACTAAGACTATTTTATTCGAGAAAATGGTTTAGAACCCCCCTAATTTATATCTGAAATCTCAACTACACACTTATTCATTACGAAAGTCCCATTACACTATTTTAAAGTAGAATTATTTGCTCCCTGGATGATAATGTGGCAAGGTAAGTGTAGGACACTCTCTCAAAGAGAGTGAGAGGTAAAAATACTAATTAAAACTTTAGATTTTAAAAATATTTCTTAAATTTATATTATAATTTTTTTATTCTTCAAAAATCTTTTGTTTCTTTTTTTAAAAAAATTATTTTTTATGGTCTTTCTTCTTCTCTTTACCAAAGCTACATCGGCGGCGGTTCTGCTCCACCACCAAGTCGGCGCCCTCACCGACTCTAATCATTAAGTTAACTCTTTTTTTTCAAATCACAAATTTCTCACAGTTAGTGTGAAAAATTGACAAGAACTGAAAATCGAAATCGAAAGTCAAGAGGATCGAACTTTAAAGTTATTAATGGAGAAAAATTCATCAAGTTACAGATCCATCGATGGAGAAGAACTCATCAACAAAATCATTAGGTAACAAACCCATTTATGAAAAAGACCCAATAATCGAAATGAGTTGCTGAACATTGTTAAATTCTAGCTTCAATACAAATCATCAAAAATTTTCTTGTGCTCATAACTCCAATGAGGCTCGAAGAAGATGGTGGCAGTCATATAAAGTATCTCCAAATCTGAAAAATTTGTTGTCGAGATTAAAGAAAAAGATGAATGGAAAAGGAAAGTGAATCAAAGAAGAAGAGGAATGGAAAAAGGAAAGTGAAAGAGAAAGATGAAAATATAGATGAAAAAATATTGCAGCATAAAGTTTTTTTGTTTTTTTTTAAAAAATGGTTAGATTACGTGGCTGAGCGCATGAGATTCATTATTTCATATAAATCTGGTTGTGTTTTTAAGGGGTATATATTTTACTTTTAAAATGTTCTGGGGGGTAATAGAACTCCCGTAATGAATAAGTGTGTAGTTGGAATATCGGGTATAGTAGATTAGGGGGGTTTTAGACCATTTTCTCATTTTATTCTGTTATTTGTAAAACTTTTGAAGGGGAACTACACTGTTGTTATAGTATACCTGTGGATATATAGACTAAAGTTATCAGTTTAAAAAAAAAAAAGATTCCTTGTAAGAGAAGCAAGGATGGTAGTTATTTTTGGGTCCTTAGATGTAACACTCATATATTTGGTTTCCAGAACAATCTTTGATGATTTATATACTGATCTTGTTATATTCTCAAAAAAGAAAAAAAATCAACTCTTCTCTGGTCTTCCAAGAATCATTTTGGGCATATTGGCTCTTGGATCCTACACTGATGCCTTCGTCTGCCTGCAAAGATTCTTGAAAACTGAGGCATTCTCATCTCTTTGTCCCCTTATGCTTGACTTTGCGCCTAAGCCCTGGAAAACCTAGTGTGTGTAGTACCTGTTCAGTTTATTAGCTTCTATCTACTCTTTGATGATTTATGTAGAGACTATCTGGTTGAAGCTCTGAAATAACCTTGGGTAGTCATCATCATCAGTATGAGAGTGTGAAACAATAAATGAGCTTTACATGTTTTGCCTGTATTTCCTTGTTTCAAAGCTTAATCCCTACTGAGTAATTCCTAGATCAAGTTCTGTAGCTGTGATAGATTCAAATCTATTTTTTTTTTTTAAAAAAAATCAAATATTCAAATCTATATGTTTGTGGTGATTCTTATCAGATGTTGGATGGCTCACAGACACTCTTATCCCGTGAAGAGCTCGAGAAAAAATTTGGTCAAGAAGGTTAGAACTAGTCTCATTTTCTGAGCTAGAGTTTGGGCATGCTGCATTTCTGTGGTTTTGCTTTCCTGCTACCCCTAGCTTTGCTGAATGTTAGACTTCATAAAAACAGTGAGCCATGTGTTAAAAAGGTATGTTGTATGTGGCACGTTTAGGCCTGAAGCTACCATGGAGCTCAGGTTGGGAACTTAAGTGCAAGATCGTCATTGCAAAACATCCATGTCATTGCCTATAGGCAATTAGAGACCCCCTTTAAAAGGACAACACTAGGCAATAAATATAGTCAGCAAAGTGGAGGCTTAATTATTAACAAAATGTTTTCTGTAGTGATTTGGGTGCTCTTTAATCCCCAAATCACTACAGAAAACATTTTGTTAATAATTAAATCTCCACTTTGCTGACAATATTTATTGCTTGAATAATTCTTGTATAACCATGGAATGTATGTTATTTGAAAATGTCCTTGCTCTTTAGGTAACTAATCTAACAGTACATGGTTCTTTCGCAGGTATCTCTTTGGACAAGCCTATAGTTGCCTCTTGTGGCACAGGTGTAACTGCTTGCGTACTTGTCTTGGTCAGTTGAATCCTCTCTCTCTCTCATACAGCTTTCGCTTGTACTGTTGTACATTAATCTATGCCCAGTATTCATATGGCTATTCCATCGTCTCAAAAGAGGGATGAATTCAAAGTTCATTTATCTTTTTAGGGCCTCCATCGACTGGGGAAGACTGACATTCCAGTCTATGATGGTTCATGGACAGAATGGGCAACACAGCCAGATACACCTCTCTGCACATCTGAAAGATGAAGACGTTTGTATGGCCTGCCTAGTTTTTATGGGTGAGCAATGATGATTGTGAATCTAGATCTGGTTCCTTTTCTTAATGGTTAGTGCAACAACTTACATTGTATTGTTGAATGATAACAACGGAAAAATTTCTTCTCTGTTGTACAAAATGCCTTAATTTTACCTTCATT</genome_strand>
        <mrna_strand>ATGGTGTTGCACCAGAGCCTCGAAAAGGAATTAACAGTGGACATGTACCCGGGAGCAAGTGTATTCCTTTTCCACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTGGATGGCTCACAGACACTCTTATCCCGTGAAGAGCTCGAGAAAAAATTTGGTCAAGAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTCTTTGGACAAGCCTATAGTTGCCTCTTGTGGCACAGGTGTAACTGCTTGCGTACTTGTCTTG....................................................................................................................................GGCCTCCATCGACTGGGGAAGACTGACATTCCAGTCTATGATGGTTCATGGACAGAATGGGCAACACAGCCAGATACACCTCTCTGCACATCTGAAAGATGAAGACGTTTGTATGGCCTGCCTAGTTTTTATGGGTGAGCAATGATGATTGTGAATCTAGATCTGGTTCCTTTTCTTAATGGTTAGTGCAACAACTTACATTGTATTGTTGAATGATAACAACGGAAAAATTTCTTCTCTGTTGTACAAAATGCCTTAATTTTACCTTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E744700" ref_strand="+" ref_description="SGN-E744700 [GI|19571830]">
      <seq>ggtatctcttggacaagcctataggtgcctcttgtggcacaggtgtaactgcttgcgtacttgtcttgggcctccatcgactggggaagactgacattccagtctatgatggttcatggacagaatgggcaacacagccagatacacctctctgcacatctgaaagatgaagacgtttgtatggcctgcctagtttttatgggtgagcaatgatgattgtgaatctagatctggttccttttcttaatggttagtgcaacaacttacattgtattgttgaatgataacaacggaaaaatttcttctctgttggacaaaatgccttaattttaccttcattatatttttggttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="18530" stop="19615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18830" g_stop="18898" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18899" i_stop="19030" i_length="132">
            <donor d_prob="0.923" d_score="0.98"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="19031" g_stop="19315" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="353" r_length="285" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="354" polyA_stop="386"/>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E744700" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>354</cumulative_length_of_scored_exons>
        <coverage percentage="0.917" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E744700" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18830" e_stop="18898"/>
          <exon e_start="19031" e_stop="19315"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTATCTCTTTGGACAAGCCTATAGTTGCCTCTTGTGGCACAGGTGTAACTGCTTGCGTACTTGTCTTGGTCAGTTGAATCCTCTCTCTCTCTCATACAGCTTTCGCTTGTACTGTTGTACATTAATCTATGCCCAGTATTCATATGGCTATTCCATCGTCTCAAAAGAGGGATGAATTCAAAGTTCATTTATCTTTTTAGGGCCTCCATCGACTGGGGAAGACTGACATTCCAGTCTATGATGGTTCATGGACAGAATGGGCAACACAGCCAGATACACCTCTCTGCACATCTGAAAGATGAAGACGTTTGTATGGCCTGCCTAGTTTTTATGGGTGAGCAATGATGATTGTGAATCTAGATCTGGTTCCTTTTCTTAATGGTTAGTGCAACAACTTACATTGTATTGTTGAATGATAACAACGGAAAAATTTCTTCTCTGTTGTACAAAATGCCTTAATTTTACCTTCATTATATTTTTGGTTA</genome_strand>
        <mrna_strand>GGTATCTC-TTGGACAAGCCTATAGGTGCCTCTTGTGGCACAGGTGTAACTGCTTGCGTACTTGTCTTG....................................................................................................................................GGCCTCCATCGACTGGGGAAGACTGACATTCCAGTCTATGATGGTTCATGGACAGAATGGGCAACACAGCCAGATACACCTCTCTGCACATCTGAAAGATGAAGACGTTTGTATGGCCTGCCTAGTTTTTATGGGTGAGCAATGATGATTGTGAATCTAGATCTGGTTCCTTTTCTTAATGGTTAGTGCAACAACTTACATTGTATTGTTGAATGATAACAACGGAAAAATTTCTTCTCTGTTGGACAAAATGCCTTAATTTTACCTTCATTATATTTTTGGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E253670" ref_strand="-" ref_description="SGN-E253670 [cLEG-32-D9]">
      <seq>attccagtctatgatggttcatggacagaatgggcaacacagccagatacacctctctgcacatctgaaagatgaagacgtttgtatggcctgcctagtttttatgggtgagcaatgatgattgtgaatctagatctggttccttttcttaatggttagtgcaacaacttacattgtattgttgaatgataacaacggaaaaatttcttctctgttgtacaaaatgccttaattttaccttcattatatttttggttagtgcaacaacttccattaactatactttgtactaaaaaacactcttatgcttggataagtgaacttagaaaggcccctgaaatcaaatgtattcatgcgttgtccagttggagtttatatttgatgtgtcattgaacataaaactacgctatgcgtgattataaatatttagcgaaatagatatttgtatttatacatataatcatttttggaacttataaaaaaaaaaaaaaaaaaaaaactcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="18758" stop="19837"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19058" g_stop="19536" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="479" r_length="479" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="480" polyA_stop="500"/>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E253670" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E253670" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="19058" e_stop="19536"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCCAGTCTATGATGGTTCATGGACAGAATGGGCAACACAGCCAGATACACCTCTCTGCACATCTGAAAGATGAAGACGTTTGTATGGCCTGCCTAGTTTTTATGGGTGAGCAATGATGATTGTGAATCTAGATCTGGTTCCTTTTCTTAATGGTTAGTGCAACAACTTACATTGTATTGTTGAATGATAACAACGGAAAAATTTCTTCTCTGTTGTACAAAATGCCTTAATTTTACCTTCATTATATTTTTGGTTAGTGCAACAACTTCCATTAACTATACTTTGTACTAAAAAACACTCTTATGCTTGGATAAGTGAACTTAGAAAGGCCCCTGAAATCAAATGTATTCATGCGTTGTCCAGTTGGAGTTTATATTTGATGTGTCATTGAACATAAAACTACGCTATGCGTGATTATAAATATTTAGCGAAATAGATATTTGTATTTATACATATAATCATTTTTGGAACTTATAA</genome_strand>
        <mrna_strand>ATTCCAGTCTATGATGGTTCATGGACAGAATGGGCAACACAGCCAGATACACCTCTCTGCACATCTGAAAGATGAAGACGTTTGTATGGCCTGCCTAGTTTTTATGGGTGAGCAATGATGATTGTGAATCTAGATCTGGTTCCTTTTCTTAATGGTTAGTGCAACAACTTACATTGTATTGTTGAATGATAACAACGGAAAAATTTCTTCTCTGTTGTACAAAATGCCTTAATTTTACCTTCATTATATTTTTGGTTAGTGCAACAACTTCCATTAACTATACTTTGTACTAAAAAACACTCTTATGCTTGGATAAGTGAACTTAGAAAGGCCCCTGAAATCAAATGTATTCATGCGTTGTCCAGTTGGAGTTTATATTTGATGTGTCATTGAACATAAAACTACGCTATGCGTGATTATAAATATTTAGCGAAATAGATATTTGTATTTATACATATAATCATTTTTGGAACTTATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E449035" ref_strand="+" ref_description="SGN-E449035 [cSTS-5-M9]">
      <seq>cttgcgtagacaattcagtttttccgacgagcaagaccggagacaaattcagtttttccgacgagaaagagagctgaaaccgaagcattagcttcgtattctctaagcttctcaatgcatctaaccacgactcctcctcctcaacagctgaactcaatacaattatcttcaaaacccctttttctcacattgccattcaaatgtagaaggaagttttcccgtataagaagacctaccattgtagcttcttcttccaatactaataacagtcccgaagggttttcttggctgcaactttcacagtccattcgccgtggttccgaacgtttcttgaatcaattggaagactctgtgaagaaagagacaggttttgattttcaggatgttaaagttaaagttggggaattttcaggtcgagctgttgattcagccaagaatggccaaattttgctgcaacgttttcagtctgagttgtttcctgagttcttgaattggaacaaattcgagtcctggaaggacgtcaagaaatgggattccaaaagagttggtgtcttcattctctatgttatagttacggtatgttcttgtcaaaaaatatatatggcaattcgagctcctattattaataggggaaagaaaagaacttactgaggcatacatggaangcattgattcctgaacctactcctgttaatgtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="20769" stop="22129"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21058" g_stop="21573" g_length="516"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="516" r_length="516" r_score="0.950"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21574" i_stop="21648" i_length="75">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.884" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21649" g_stop="21829" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="699" r_length="183" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E449035" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E449035" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21058" e_stop="21573"/>
          <exon e_start="21649" e_stop="21829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCCCAAAGCCCCATTCGGTTTTTCCGACGACCAAGACCGGCGAC-AATTCAGTTTTTCCGACGAGCAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAGGTGAATTTTCCCATTTCTTATTTGAGTTATTTGTATAACTTTGTGCTCACATTATCCTTTTTCCCCTTCCCCCAGGACGTCAAGAAATGGGATTCCAAAAGAGTTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTCAAAAAATATATATGGCAATTCGAGCTCCTATTATTAATA-GGGAAAGAAAAGAACTTACTGAGGCATACATGGAA-GCATTGATTCCTGAACCTACTCCTGTTAATGTCA</genome_strand>
        <mrna_strand>CTTGCGTAG-ACAATTCAGTTTTTCCGACGAGCAAGACCGGAGACAAATTCAGTTTTTCCGACGAGAAAGAGAGCTGAAACCGAAGCATTAGCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACGACTCCTCCTCCTCAACAGCTGAACTCAATACAATTATCTTCAAAACCCCTTTTTCTCACATTGCCATTCAAATGTAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCCGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGAAAGAGACAGGTTTTGATTTTCAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAATTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAG...........................................................................GACGTCAAGAAATGGGATTCCAAAAGAGTTGGTGTCTTCATTCTCTATGTTATAGTTACGGTATGTTCTTGTCAAAAAATATATATGGCAATTCGAGCTCCTATTATTAATAGGGGAAAGAAAAGAACTTACTGAGGCATACATGGAANGCATTGATTCCTGAACCTACTCCTGTTAATGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E452169" ref_strand="+" ref_description="SGN-E452169 [cSTS-15-J18]">
      <seq>gacaattcagtttttccgacgagcaagaccggagacaaattcagtttttccgacgagaaagagagccgaaaccgaagcattatcttcgtattctctaagcttctcaatgcatctaaccacgactcctcctcctcaacagctgaactcaatacaattatcttcaaaacccctttttctcacattgccattcaaatgtagaaggaagttttcccgtataagaagacctaccattgtagcttcttcttccaatactaataacagtcccgaaaggttttcttggctgcaactttcacagtccattcgccgtggttccgaacgtttcttgaatcacttggaagactctgtgaagaaagagacaggttttgattttcaggatgttaaagttaaagttggggaattttcaggtcgagctgttgattcagccaagaatggccaaattttgctgcaacgttttcagtctgagttgtttcctgagttcttgaattggaacaaattcgagtcctggaaggacgtcaagaaatgggattccaaaagagttggtgtattcattctctatattatagttacggtatgttcttgtcaaaaaatatatatggcaattcgagctcctattattaatanggaaagaaaagagcttactgaggcatacatggaagcattgattcctgaaccta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="20769" stop="22114"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21067" g_stop="21573" g_length="507"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="508" r_length="508" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21574" i_stop="21648" i_length="75">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.884" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21649" g_stop="21814" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="674" r_length="166" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E452169" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E452169" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21067" e_stop="21573"/>
          <exon e_start="21649" e_stop="21814"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCCATTCGGTTTTTCCGACGACCAAGACCGGCGAC-AATTCAGTTTTTCCGACGAGCAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAGGTGAATTTTCCCATTTCTTATTTGAGTTATTTGTATAACTTTGTGCTCACATTATCCTTTTTCCCCTTCCCCCAGGACGTCAAGAAATGGGATTCCAAAAGAGTTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTCAAAAAATATATATGGCAATTCGAGCTCCTATTATTAATAGGGAAAGAAAAGAACTTACTGAGGCATACATGGAAGCATTGATTCCTGAACCTA</genome_strand>
        <mrna_strand>GACAATTCAGTTTTTCCGACGAGCAAGACCGGAGACAAATTCAGTTTTTCCGACGAGAAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACGACTCCTCCTCCTCAACAGCTGAACTCAATACAATTATCTTCAAAACCCCTTTTTCTCACATTGCCATTCAAATGTAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCCGAAAGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCACTTGGAAGACTCTGTGAAGAAAGAGACAGGTTTTGATTTTCAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAATTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAG...........................................................................GACGTCAAGAAATGGGATTCCAAAAGAGTTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTCAAAAAATATATATGGCAATTCGAGCTCCTATTATTAATANGGAAAGAAAAGAGCTTACTGAGGCATACATGGAAGCATTGATTCCTGAACCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E440424" ref_strand="+" ref_description="SGN-E440424 [cSTA-16-P3]">
      <seq>gacaattcagtttttccgacgagcaagaccggagacaaattcagtttttccgacgagaaagagagccgaaaccgaagcattatcttcgtattctctaagcttctcaatgcatctaaccactactcctcctcctcaacagctgaactcaatacaattatcttcaaaacccctttttctcacattgccattcaaatgtagaaggaagttttcccgtataagaagacctaccattgtagcttcttcttccaatactaataacagtcccgaagggttttcttggctgcaactttcacagtccattcgccgtggttctgaacgtctcttgaatcaattggaagactctgtgaagaaagagacagattttgattttcaggatgttaaagttaaagttggggaattttcaggtcgagctgttgattcagccaagaatggccaaattttgctgcaacgttttcagtctgagttgtttcctgagttcttgaattggaacaaattcgagtcctggaaggacgtcaagaaatgggattccaaaagagttggtgtcttcattctctatgttatagttacggtatgttcttgtcaaaaaatatatatggcaattcgagctcctattattaatagggaaagaaaagaacttactgaggcatacatggaagcattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="20769" stop="22102"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21067" g_stop="21573" g_length="507"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="508" r_length="508" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="21574" i_stop="21648" i_length="75">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.884" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21649" g_stop="21802" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="662" r_length="154" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E440424" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E440424" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21067" e_stop="21573"/>
          <exon e_start="21649" e_stop="21802"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCCATTCGGTTTTTCCGACGACCAAGACCGGCGAC-AATTCAGTTTTTCCGACGAGCAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAGGTGAATTTTCCCATTTCTTATTTGAGTTATTTGTATAACTTTGTGCTCACATTATCCTTTTTCCCCTTCCCCCAGGACGTCAAGAAATGGGATTCCAAAAGAGTTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTCAAAAAATATATATGGCAATTCGAGCTCCTATTATTAATAGGGAAAGAAAAGAACTTACTGAGGCATACATGGAAGCATTGA</genome_strand>
        <mrna_strand>GACAATTCAGTTTTTCCGACGAGCAAGACCGGAGACAAATTCAGTTTTTCCGACGAGAAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAACTCAATACAATTATCTTCAAAACCCCTTTTTCTCACATTGCCATTCAAATGTAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCCGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCTGAACGTCTCTTGAATCAATTGGAAGACTCTGTGAAGAAAGAGACAGATTTTGATTTTCAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAATTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAG...........................................................................GACGTCAAGAAATGGGATTCCAAAAGAGTTGGTGTCTTCATTCTCTATGTTATAGTTACGGTATGTTCTTGTCAAAAAATATATATGGCAATTCGAGCTCCTATTATTAATAGGGAAAGAAAAGAACTTACTGAGGCATACATGGAAGCATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E317983" ref_strand="+" ref_description="SGN-E317983 [cTOA-30-H13]">
      <seq>agaccggcgacaattcagtttttccgacgagcaagagagccgaaaccgaagcattatcttcgtattctctaagcttctcaatgcatctaaccactactcctcctcctcaacagctgaattcaatacaattatcttcaaaaccccttttactcacattgccattcaaatgcagaaggaagttttcccgtataagaagacctaccattgtagcttcttcttccaatactaataacagtcctgaagggttttcttggctgcaactttcacagtccattcgccgtggttccgaacgtttcttgaatcaattggaagactctgtgaagcaagagacgggttttgattttaaggatgttaaagttaaagttggggaattttcaggtcgagctgttgattcagccaagaatggccaagttttgctgcaacgttttcagtctgagttgtttcctgagttcttgaattggaacaaattcgagtcctggaaggtgaattttcccatttcttatttgagttatttgtataactttgtgctcacattatcctttttccccttcccccaggacgtcaagaaatgggattccaaaagagttggtgtattcattctctatattatagttacggtatgttcttgtcaaaaatatatatggcaattcgagctcctattattaatagggaaagaaaagaacttactgaggcatacatggaagcattgattcctgaacctactcctggtaatgtcaaaaggtaaacacaatcaaactgctaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="20792" stop="22157"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21092" g_stop="21857" g_length="766"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="763" r_length="763" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E317983" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>766</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E317983" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21092" e_stop="21857"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACCGGCGACAATTCAGTTTTTCCGACGAGCAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAGGTGAATTTTCCCATTTCTTATTTGAGTTATTTGTATAACTTTGTGCTCACATTATCCTTTTTCCCCTTCCCCCAGGACGTCAAGAAATGGGATTCCAAAAGAGTTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTCAAAAAATATATATGGCAATTCGAGCTCCTATTATTAATAGGGAAAGAAAAGAACTTACTGAGGCATACATGGAAGCATTGATTCCTGAACCTACTCCTGTTAATGTCAAAAGGTAAAACACAAATCAAACTGCTAA</genome_strand>
        <mrna_strand>AGACCGGCGACAATTCAGTTTTTCCGACGAGCAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAGGTGAATTTTCCCATTTCTTATTTGAGTTATTTGTATAACTTTGTGCTCACATTATCCTTTTTCCCCTTCCCCCAGGACGTCAAGAAATGGGATTCCAAAAGAGTTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTC-AAAAATATATATGGCAATTCGAGCTCCTATTATTAATAGGGAAAGAAAAGAACTTACTGAGGCATACATGGAAGCATTGATTCCTGAACCTACTCCTGGTAATGTCAAAAGGT-AAACAC-AATCAAACTGCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E317746" ref_strand="+" ref_description="SGN-E317746 [cTOA-30-I13]">
      <seq>agaccggcgacaattcagtttttccgacgagcaagagagccgaaaccgaagcattatcttcgtattctctaagcttctcaatgcatctaaccactactcctcctcctcaacagctgaattcaatacaattatcttcaaaaccccttttactcacattgccattcaaatgcagaaggaagttttcccgtataagaagacctaccattgtagcttcttcttccaatactaataacagtcctgaagggttttcttggctgcaactttcacagtccattcgccgtggttccgaacgtttcttgaatcaattggaagactctgtgaagcaagagacgggttttgattttaaggatgttaaagttaaagttggggaattttcaggtcgagctgttgattcagccaagaatggccaagttttgctgcaacgttttcagtctgagttgtttcctgagttcttgaattggaacaaattcgagtcctggaaggtgaattttcccatttcttatttgagttatttgtataactttgtgctcacattatcctttttccccttccccccaggacgtcaagaaatgggattccaaaagaagtggtgtattcattctctatattatagttacggtatgttcttgtcaaaaatatatatggcaattcgagctcctatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="20792" stop="22053"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21092" g_stop="21753" g_length="662"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="662" r_length="662" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E317746" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E317746" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21092" e_stop="21753"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACCGGCGACAATTCAGTTTTTCCGACGAGCAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAGGTGAATTTTCCCATTTCTTATTTGAGTTATTTGTATAACTTTGTGCTCACATTATCCTTTTTCCCCTT-CCCCCAGGACGTCAAGAAATGGGATTCCAAAAGAGTTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTCAAAAAATATATATGGCAATTCGAGCTCCTATT</genome_strand>
        <mrna_strand>AGACCGGCGACAATTCAGTTTTTCCGACGAGCAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAGGTGAATTTTCCCATTTCTTATTTGAGTTATTTGTATAACTTTGTGCTCACATTATCCTTTTTCCCCTTCCCCCCAGGACGTCAAGAAATGGGATTCCAAAAGAAGTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTC-AAAAATATATATGGCAATTCGAGCTCCTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E425616" ref_strand="+" ref_description="SGN-E425616 [STM-45-G18]">
      <seq>aggaaggagaagatggcagaacaattagattcagtaaatgcgaggtatgtggttgaatttgacatgaaggaagttgagaacagccttcgcaaagatgtggttgagaagacaagagaaactcaaggaaccagggcattgtggatctcgaaaagatggtggagatatcgcccgaaacttccctatatctattttcttcaaaaacttgatacttctgaggtggctgctatagtcttcacagaggatctgaagagagtgtttgtcacaatgaaagaaggattccctcttgaatatattgttgatattccactagatcctttcttatttgagatgatatcaagttctggagctgaagtagatctacttcagaagcggcagattcactactttttcaaagttctttttgctttattgcctggaatactgattttgtggtttataagagaatctatgatgcttctgaacatcacgacaaatcgcctcctctataagaaatataaacaactcttcgatatggcttatgctgaaaattttattttgttggagaagttggtgagacgaaatcgatgtataaagaaatagtattgggaggagatgtttgggatcttttggatgaattgatgatttatatgggaaatccaatgcaatattatgagaaagatgtcaattttgtgcggggtgtgcttctgtctggtccccctggaacaggtaaaacactgtttgctcggacacttgcaaaggaaagtgggatgccttttgtatttgcttctggtgcagagttactgatagtgaaaagatggtgctgcacgatcatgaaatgtttctgttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="23549" stop="25625"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23849" g_stop="24064" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24065" i_stop="24438" i_length="374">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24439" g_stop="24516" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="294" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24517" i_stop="24606" i_length="90">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24607" g_stop="24849" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="537" r_length="243" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24850" i_stop="24946" i_length="97">
            <donor d_prob="0.928" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24947" g_stop="25083" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="538" r_stop="674" r_length="137" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25084" i_stop="25167" i_length="84">
            <donor d_prob="0.963" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25168" g_stop="25325" g_length="158"/>
          <reference_exon_boundary r_type="cDNA" r_start="675" r_stop="827" r_length="153" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E425616" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>832</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E425616" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23849" e_stop="24064"/>
          <exon e_start="24439" e_stop="24516"/>
          <exon e_start="24607" e_stop="24849"/>
          <exon e_start="24947" e_stop="25083"/>
          <exon e_start="25168" e_stop="25325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAGGAGAAGATGGCAGAACAATTAGATTCAGTAAATGCGAGGTATGTGGTTGAATTTGACATGAAGGAAGTTGAGAACAGCCTTCGCAAAGATGTTGTTGAGAAGACAAGAGAAACTCAAGGAACCAGGGCATTGTGGATCTCGAAAAGATGGTGGAGATATCGCCCGAAACTTCCCTATACCTATTTTCTTCAAAAACTTGATACTTCTGAGGTAAATGTTTATCTTCTCACTTCTGTATCTCTTCATACTCAGATATGGTTGGTCCCTTCTGGTTCTAATGCTTCCAAGTGGAAATAAGTGTGGATGCTTTTAAATCTACAGTATTAATGAATACATGGTACATTTTAAGGATTGTACTTCAAGTTGTGGCATGGGTGACTTGATGCCACCCTATTCTTCATTCTTTTGAATGATGTTATAAGGGAAAATAGCAAAAGATAGATTTCTTAAAGAAAACAGTTTCCTTTTCTTGAACTCTAGCTGGAAACTAAAATTATCTTTTACATGTGGATCAAACTAATTTATTTTCTTTACTTGGATATGGACGCACTTCCAACTAGATTTACTGACTTAGTGTTCTGCAGGTGGCTGCTATAGTCTTCACAGAGGATCTGAAGAGAGTGTTTGTCACAATGAAAGAAGGATTCCCTCTTGAATATATTGTGCGTAAGACATATTAACCTTTCCAGAATAAAGTCATCACTGTTCCTGAACTCCTGACCTTTATACTGATTAATGTATTCTCTTCTCAGGTTGATATTCCACTAGATCCTTTCTTATTTGAGATGATATCAAGTTCTGGAGCTGAAGTAGATCTACTTCAGAAGCGGCAGATTCATTACTTTTTCAAAGTTCTTTTTGCTTTATTGCCTGGAATACTGATTTTGTGGTTTATAAGAGAATCTATGATGCTTCTGAACATCACGACAAATCGCCTCCTCTATAAGAAATATAAACAACTCTTCGATATGGCTTATGCTGAAAATTTTATTTTGGTAACTTTTCATCATCTAATACTAGTCTCTTTTATTTTTCTGAATATTTTGAATCTACAGTCACCTTTTAACTCCTATTCCTTGCCTACTTAGCCAGTTGGAGAAGTTGGTGAGACGAAATCGATGTATAAAGAAATAGTATTGGGAGGAGATGTTTGGGATCTTTTGGATGAATTGATGATTTATATGGGAAATCCAATGCAATATTATGAGAAAGATGTCAAATTTGTGCGGGTAAACTCAATGATCCTTTCCAGACGTGCTAAAACTATATACTATGTAAATCTTGTTCAGTATGATTCATTTAATGCACTGCAGGGTGTGCTTCTGTCTGGCCCCCCTGGAACAGGTAAAACACTGTTTGCTCGGACACTTGCAAAGGAAAGTGGGATGCCTTTTGTATTTGCTTCTGGTGCAGAGTTTACTGATAGTGAAAAGAGTGGTGCTGCACGAATCAATGAAATGTTTTCTGTTGC</genome_strand>
        <mrna_strand>AGGAAGGAGAAGATGGCAGAACAATTAGATTCAGTAAATGCGAGGTATGTGGTTGAATTTGACATGAAGGAAGTTGAGAACAGCCTTCGCAAAGATGTGGTTGAGAAGACAAGAGAAACTCAAGGAACCAGGGCATTGTGGATCTCGAAAAGATGGTGGAGATATCGCCCGAAACTTCCCTATATCTATTTTCTTCAAAAACTTGATACTTCTGAG......................................................................................................................................................................................................................................................................................................................................................................................GTGGCTGCTATAGTCTTCACAGAGGATCTGAAGAGAGTGTTTGTCACAATGAAAGAAGGATTCCCTCTTGAATATATT..........................................................................................GTTGATATTCCACTAGATCCTTTCTTATTTGAGATGATATCAAGTTCTGGAGCTGAAGTAGATCTACTTCAGAAGCGGCAGATTCACTACTTTTTCAAAGTTCTTTTTGCTTTATTGCCTGGAATACTGATTTTGTGGTTTATAAGAGAATCTATGATGCTTCTGAACATCACGACAAATCGCCTCCTCTATAAGAAATATAAACAACTCTTCGATATGGCTTATGCTGAAAATTTTATTTTG.................................................................................................TTGGAGAAGTTGGTGAGACGAAATCGATGTATAAAGAAATAGTATTGGGAGGAGATGTTTGGGATCTTTTGGATGAATTGATGATTTATATGGGAAATCCAATGCAATATTATGAGAAAGATGTCAATTTTGTGCGG....................................................................................GGTGTGCTTCTGTCTGGTCCCCCTGGAACAGGTAAAACACTGTTTGCTCGGACACTTGCAAAGGAAAGTGGGATGCCTTTTGTATTTGCTTCTGGTGCAGAG-TTACTGATAGTGAAAAGA-TGGTGCTGCACG-ATC-ATGAAATG-TTTCTGTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E455024" ref_strand="+" ref_description="SGN-E455024 [cSTS-25-G23]">
      <seq>aggaaggagaagatggcagaacaattagattcagtaaatgcgaggtatgtggttgaatttgacatgaaggaagttgagaacagccttcgcaaagatgtggttgagaagacaagagaaactcaaggaaccagggcattgtggatctcgaaaagatggtggagatatcgcccgaaacttccctatatctattttcttcaaaaacttgatacttctgaggtggctgctatagtcttcacagaggatctgaagagagtgtttgtcacaatgaaagaaggattccctcttgaatatattgttgatattccactagatcctttcttatttgagatgatatcaagttctggagctgaagtagatctacttcagaagcggcagattcactactttttcaaagttctttttgctttattgcctggaatactgattttgtggtttataagagaatctatgatgcttctgaacatcacgacaaatcgcctcctctataagaaatataaacaactcttcgatatggcttatgctgaaaattttattttgttggagaagttggtgagacgaaatcgatgtataaagaaatagtattgggaggagatgtttgggatcttttggatgaattgatgatttatatgggaaatccaatgcaatattatgagaaagatgtcaaatttgtgcggggtgtgcttctgtctggtccccctggaacaggtaaaacactgtttgctcggacacttgcaaaggaaagtgggatgccttttgtatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="23549" stop="25555"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23849" g_stop="24064" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24065" i_stop="24438" i_length="374">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24439" g_stop="24516" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="294" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24517" i_stop="24606" i_length="90">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24607" g_stop="24849" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="537" r_length="243" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24850" i_stop="24946" i_length="97">
            <donor d_prob="0.928" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24947" g_stop="25083" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="538" r_stop="674" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25084" i_stop="25167" i_length="84">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25168" g_stop="25255" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="675" r_stop="762" r_length="88" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E455024" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E455024" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23849" e_stop="24064"/>
          <exon e_start="24439" e_stop="24516"/>
          <exon e_start="24607" e_stop="24849"/>
          <exon e_start="24947" e_stop="25083"/>
          <exon e_start="25168" e_stop="25255"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAGGAGAAGATGGCAGAACAATTAGATTCAGTAAATGCGAGGTATGTGGTTGAATTTGACATGAAGGAAGTTGAGAACAGCCTTCGCAAAGATGTTGTTGAGAAGACAAGAGAAACTCAAGGAACCAGGGCATTGTGGATCTCGAAAAGATGGTGGAGATATCGCCCGAAACTTCCCTATACCTATTTTCTTCAAAAACTTGATACTTCTGAGGTAAATGTTTATCTTCTCACTTCTGTATCTCTTCATACTCAGATATGGTTGGTCCCTTCTGGTTCTAATGCTTCCAAGTGGAAATAAGTGTGGATGCTTTTAAATCTACAGTATTAATGAATACATGGTACATTTTAAGGATTGTACTTCAAGTTGTGGCATGGGTGACTTGATGCCACCCTATTCTTCATTCTTTTGAATGATGTTATAAGGGAAAATAGCAAAAGATAGATTTCTTAAAGAAAACAGTTTCCTTTTCTTGAACTCTAGCTGGAAACTAAAATTATCTTTTACATGTGGATCAAACTAATTTATTTTCTTTACTTGGATATGGACGCACTTCCAACTAGATTTACTGACTTAGTGTTCTGCAGGTGGCTGCTATAGTCTTCACAGAGGATCTGAAGAGAGTGTTTGTCACAATGAAAGAAGGATTCCCTCTTGAATATATTGTGCGTAAGACATATTAACCTTTCCAGAATAAAGTCATCACTGTTCCTGAACTCCTGACCTTTATACTGATTAATGTATTCTCTTCTCAGGTTGATATTCCACTAGATCCTTTCTTATTTGAGATGATATCAAGTTCTGGAGCTGAAGTAGATCTACTTCAGAAGCGGCAGATTCATTACTTTTTCAAAGTTCTTTTTGCTTTATTGCCTGGAATACTGATTTTGTGGTTTATAAGAGAATCTATGATGCTTCTGAACATCACGACAAATCGCCTCCTCTATAAGAAATATAAACAACTCTTCGATATGGCTTATGCTGAAAATTTTATTTTGGTAACTTTTCATCATCTAATACTAGTCTCTTTTATTTTTCTGAATATTTTGAATCTACAGTCACCTTTTAACTCCTATTCCTTGCCTACTTAGCCAGTTGGAGAAGTTGGTGAGACGAAATCGATGTATAAAGAAATAGTATTGGGAGGAGATGTTTGGGATCTTTTGGATGAATTGATGATTTATATGGGAAATCCAATGCAATATTATGAGAAAGATGTCAAATTTGTGCGGGTAAACTCAATGATCCTTTCCAGACGTGCTAAAACTATATACTATGTAAATCTTGTTCAGTATGATTCATTTAATGCACTGCAGGGTGTGCTTCTGTCTGGCCCCCCTGGAACAGGTAAAACACTGTTTGCTCGGACACTTGCAAAGGAAAGTGGGATGCCTTTTGTATTTG</genome_strand>
        <mrna_strand>AGGAAGGAGAAGATGGCAGAACAATTAGATTCAGTAAATGCGAGGTATGTGGTTGAATTTGACATGAAGGAAGTTGAGAACAGCCTTCGCAAAGATGTGGTTGAGAAGACAAGAGAAACTCAAGGAACCAGGGCATTGTGGATCTCGAAAAGATGGTGGAGATATCGCCCGAAACTTCCCTATATCTATTTTCTTCAAAAACTTGATACTTCTGAG......................................................................................................................................................................................................................................................................................................................................................................................GTGGCTGCTATAGTCTTCACAGAGGATCTGAAGAGAGTGTTTGTCACAATGAAAGAAGGATTCCCTCTTGAATATATT..........................................................................................GTTGATATTCCACTAGATCCTTTCTTATTTGAGATGATATCAAGTTCTGGAGCTGAAGTAGATCTACTTCAGAAGCGGCAGATTCACTACTTTTTCAAAGTTCTTTTTGCTTTATTGCCTGGAATACTGATTTTGTGGTTTATAAGAGAATCTATGATGCTTCTGAACATCACGACAAATCGCCTCCTCTATAAGAAATATAAACAACTCTTCGATATGGCTTATGCTGAAAATTTTATTTTG.................................................................................................TTGGAGAAGTTGGTGAGACGAAATCGATGTATAAAGAAATAGTATTGGGAGGAGATGTTTGGGATCTTTTGGATGAATTGATGATTTATATGGGAAATCCAATGCAATATTATGAGAAAGATGTCAAATTTGTGCGG....................................................................................GGTGTGCTTCTGTCTGGTCCCCCTGGAACAGGTAAAACACTGTTTGCTCGGACACTTGCAAAGGAAAGTGGGATGCCTTTTGTATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E315442" ref_strand="+" ref_description="SGN-E315442 [cTOA-22-B11]">
      <seq>agaacaattagattcagtaaatgcgaggtatgtggttgaatttgacatgaaggaagttgagaacagccttcgcaaagatgttgttgagaagacaagagaaactcaaggaaccagggcattgtggatctcgaaaagatggtggagatatcgcccgaaacttccctatacctattttcttcaaaaacttgatacttctgaggtggctgctatagtcttcacagaggatctgaagagagtgtttgtcacaatgaaagaaggattccctcttgaatatattgttgatattccactagatcctttcttatttgagatgatatcaagttctggagctgaagtagatctacttcagaagcggcagattcattactttttcaaagttctttttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="23566" stop="25017"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23866" g_stop="24064" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="199" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24065" i_stop="24438" i_length="374">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24439" g_stop="24516" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="277" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24517" i_stop="24606" i_length="90">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24607" g_stop="24717" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="388" r_length="111" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E315442" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>388</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E315442" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23866" e_stop="24064"/>
          <exon e_start="24439" e_stop="24516"/>
          <exon e_start="24607" e_stop="24717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAACAATTAGATTCAGTAAATGCGAGGTATGTGGTTGAATTTGACATGAAGGAAGTTGAGAACAGCCTTCGCAAAGATGTTGTTGAGAAGACAAGAGAAACTCAAGGAACCAGGGCATTGTGGATCTCGAAAAGATGGTGGAGATATCGCCCGAAACTTCCCTATACCTATTTTCTTCAAAAACTTGATACTTCTGAGGTAAATGTTTATCTTCTCACTTCTGTATCTCTTCATACTCAGATATGGTTGGTCCCTTCTGGTTCTAATGCTTCCAAGTGGAAATAAGTGTGGATGCTTTTAAATCTACAGTATTAATGAATACATGGTACATTTTAAGGATTGTACTTCAAGTTGTGGCATGGGTGACTTGATGCCACCCTATTCTTCATTCTTTTGAATGATGTTATAAGGGAAAATAGCAAAAGATAGATTTCTTAAAGAAAACAGTTTCCTTTTCTTGAACTCTAGCTGGAAACTAAAATTATCTTTTACATGTGGATCAAACTAATTTATTTTCTTTACTTGGATATGGACGCACTTCCAACTAGATTTACTGACTTAGTGTTCTGCAGGTGGCTGCTATAGTCTTCACAGAGGATCTGAAGAGAGTGTTTGTCACAATGAAAGAAGGATTCCCTCTTGAATATATTGTGCGTAAGACATATTAACCTTTCCAGAATAAAGTCATCACTGTTCCTGAACTCCTGACCTTTATACTGATTAATGTATTCTCTTCTCAGGTTGATATTCCACTAGATCCTTTCTTATTTGAGATGATATCAAGTTCTGGAGCTGAAGTAGATCTACTTCAGAAGCGGCAGATTCATTACTTTTTCAAAGTTCTTTTTGCT</genome_strand>
        <mrna_strand>AGAACAATTAGATTCAGTAAATGCGAGGTATGTGGTTGAATTTGACATGAAGGAAGTTGAGAACAGCCTTCGCAAAGATGTTGTTGAGAAGACAAGAGAAACTCAAGGAACCAGGGCATTGTGGATCTCGAAAAGATGGTGGAGATATCGCCCGAAACTTCCCTATACCTATTTTCTTCAAAAACTTGATACTTCTGAG......................................................................................................................................................................................................................................................................................................................................................................................GTGGCTGCTATAGTCTTCACAGAGGATCTGAAGAGAGTGTTTGTCACAATGAAAGAAGGATTCCCTCTTGAATATATT..........................................................................................GTTGATATTCCACTAGATCCTTTCTTATTTGAGATGATATCAAGTTCTGGAGCTGAAGTAGATCTACTTCAGAAGCGGCAGATTCATTACTTTTTCAAAGTTCTTTTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E452109" ref_strand="+" ref_description="SGN-E452109 [cSTS-15-N15]">
      <seq>atcgcctcctctataagaaatataaacaactcttcgatatggcttatgctgaaaattttattttgccagttggagaagttggtgagacgaaatcgatgtataaagaaatagtattgggaggagatgtttgggatcttttggatgaattgatgatttatatgggaaatccaatgcagtattatgagaaagatgtcaaatttgtgcggggtgtgcttctgtctggcccccctggaacaggtaaaacactgtttgctcggacacttgcaaaggaaagtgggatgccttttgtatttgcttctggtgcagagtttactgatagtgaaaagagtggtgctgcacgaatcaatgaaatgttttctgttgctaggagaaatgctccagcttttgtatttatagatgagattgatgctattgctggaaggcatgcaagaaaggatccacgcaggaaggcaacatttgaggctctgatttctcagcttgacggggagaaagaaaaaactggtgttgataggttttcactaagacaagctgtcatattcatctgtgcaaccaatcggccagatgaacttgacttagaatttgtccgccctggacgtattgacagacgtgtgtatattggtttaccagatgcaaagcaacgagtgcaaatttttggagttcacagtgctgggaaacagctttccgaggatattgcctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="24485" stop="27838"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24785" g_stop="24849" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24850" i_stop="24942" i_length="93">
            <donor d_prob="0.928" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24943" g_stop="25083" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="206" r_length="141" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25084" i_stop="25167" i_length="84">
            <donor d_prob="0.963" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25168" g_stop="25335" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="374" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25336" i_stop="26551" i_length="1216">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26552" g_stop="26664" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="487" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26665" i_stop="27326" i_length="662">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.880" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="27327" g_stop="27538" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="699" r_length="212" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E452109" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E452109" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24785" e_stop="24849"/>
          <exon e_start="24943" e_stop="25083"/>
          <exon e_start="25168" e_stop="25335"/>
          <exon e_start="26552" e_stop="26664"/>
          <exon e_start="27327" e_stop="27538"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGCCTCCTCTATAAGAAATATAAACAACTCTTCGATATGGCTTATGCTGAAAATTTTATTTTGGTAACTTTTCATCATCTAATACTAGTCTCTTTTATTTTTCTGAATATTTTGAATCTACAGTCACCTTTTAACTCCTATTCCTTGCCTACTTAGCCAGTTGGAGAAGTTGGTGAGACGAAATCGATGTATAAAGAAATAGTATTGGGAGGAGATGTTTGGGATCTTTTGGATGAATTGATGATTTATATGGGAAATCCAATGCAATATTATGAGAAAGATGTCAAATTTGTGCGGGTAAACTCAATGATCCTTTCCAGACGTGCTAAAACTATATACTATGTAAATCTTGTTCAGTATGATTCATTTAATGCACTGCAGGGTGTGCTTCTGTCTGGCCCCCCTGGAACAGGTAAAACACTGTTTGCTCGGACACTTGCAAAGGAAAGTGGGATGCCTTTTGTATTTGCTTCTGGTGCAGAGTTTACTGATAGTGAAAAGAGTGGTGCTGCACGAATCAATGAAATGTTTTCTGTTGCTAGGAGAAATGTAAGTCTACTTCTTCTAATAAAAAAATTGACATCATATAGGGATGGGAATGTTCCTCAAAGTAAAAAAATTGCATCTTATGATTTCTATACCGAAAGCAGCTACCAGTCAAATGTTAAAGGGGGTGGGGGGGGGGGGGGGTAAGTCTCCAAGGAAACTTCTAAACCAGTAACAAATATTCAGTCTAACTCAAAACCAGAAACTTATTTTTGTCTAGTGTGCTTTTACGATGCATTAAGCATAAGTTACTTTAGCTGTTAGTCTTTTTTCAATTTATGTTAAACTCTTGGTCTCACTATTTGAAGTTTGAACCAAACACGAATAACCAGGTCTTGAGCATGCTGAGTAACTACTGGGGATGAAGTACAACAACAACAATCCAGTATATTCCCTCATGTGGAGTCTGTGGAGGGTCAGGTGTACGCAGATTCCTACCTTGAGGGGGTATAGAGGTTGTTTTCCGATATACCCTTGGTTCGAGAATAGTTTTGAAAGAAGAACAAGAGTAAAAATCAATGATGAGGATAATGAAGAAAGTAAAGCACTGAGAGTAAAATAGTGTAGATAACCAAAGTAAATGAAACATCACCAGTGTTTTGGAGAGTGAGAAGCGGAAAAGAGCGACAAGGGCTCGGCGTGAAGCAAAGCACACTTCTTTCAACTGAACTGCTATTCAATACAAAAATAAAGAAATATCAAATATGTTTTACTATCTTACCTAATTTGGCCCACTTCGTGCCCCAGAAGGTAGCACTTAATACGAAAATATTAGCCATGTGGGTGCATATACTGGCTGGTACTTCTTGCGGTAGCGGAAGCTATTTGTGTCTACTAAGATCGTAGATGTTTTGATACCATGTGAAAATAATTAAAAAACTTCTCATGAACTTGATTAACAAGGTACAAGAGGTGGTCCTTATAGGAGTATTAGGTTACATATAGTAAGAAGGTAATCGATCTCTATGCTGATAAGGTTAATAAATTCTATTTATTAAATACAATATATGCTAAGGTACCTTATAAATTTTTTAAAATGAATTTCCTTGGGTTGAGGCCCTTTTCCCAACCCTACTGCATTTATGACCGGTCTGCCTTTTTTTTTTAATGTACAAGAAACAAGATTATATGAATCTAGACACATATTTACTCGTAATTCAACAATTTACTTTTGCTAATTCAAGGGGATAAAATTTACATTCAGTTGTCCTCTTTGTAGGCTCCAGCTTTTGTATTTATAGATGAGATTGATGCTATTGCTGGAAGGCATGCAAGAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTGATTTCTCAGCTTGACGGGGAGTGAGTATCGTAATCTCATTTCATGGATATAATACTCTTCTTTGCAATGAAAATTTCATATTGGAGAACACTATAGTACAGCTGTTTTTGATGAGATCTGATTCTAGAATCTTATTCTGCAGTCTGGTTGATATGGCTTCTCAAAGAAGAACATTTCCCTTTCTTCCCTACCCTGTCTACAATCTTTAGCCAGTGAAATCTTTTGCTGTTGAATTATGCATTTTTATATTATGAGGCAATGAAAAATCTTGTGAACTTTGGAGTCTTTTGCTCTTTTTGTCGAACTATGAACAAATATGAGTTAATGTGTCTTGGCAAATTGACTAACTTGCAGCACCTAACAGTTTAATTAATATGTGGACATCACTTTATAATGTCCTTTAAGTGTTGTTTCAAAGAAGAGAAAATATGACGCATGTTCTGTTTGCATCTTCTGTTACGAGTTAGCAATATTTTCTCATACTGGAAACGCCAAGATTTCTGTGATTATTTATTTTGGTATGTTTATCAAGTGTACTGCTAGAGATAGAAATTACAGTAACATGCCTAGCAAAAAAGATTACTCTAATATTCTAGAGAAGTATTGAAGGCAAAGCCATTTTTTCTCTCCTATATCCCTGTATGGTTGTGCAGCCAAGATAATAAAGGACTTGTTTGTGCAGGAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGTCATATTCATTTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGTCCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGAGTTCACAGTGCTGGGAAACAGCTTTCCGAGGATATTGCCTTTG</genome_strand>
        <mrna_strand>ATCGCCTCCTCTATAAGAAATATAAACAACTCTTCGATATGGCTTATGCTGAAAATTTTATTTTG.............................................................................................CCAGTTGGAGAAGTTGGTGAGACGAAATCGATGTATAAAGAAATAGTATTGGGAGGAGATGTTTGGGATCTTTTGGATGAATTGATGATTTATATGGGAAATCCAATGCAGTATTATGAGAAAGATGTCAAATTTGTGCGG....................................................................................GGTGTGCTTCTGTCTGGCCCCCCTGGAACAGGTAAAACACTGTTTGCTCGGACACTTGCAAAGGAAAGTGGGATGCCTTTTGTATTTGCTTCTGGTGCAGAGTTTACTGATAGTGAAAAGAGTGGTGCTGCACGAATCAATGAAATGTTTTCTGTTGCTAGGAGAAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGCTTTTGTATTTATAGATGAGATTGATGCTATTGCTGGAAGGCATGCAAGAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTGATTTCTCAGCTTGACGGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGTCATATTCATCTGTGCAACCAATCGGCCAGATGAACTTGACTTAGAATTTGTCCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGAGTTCACAGTGCTGGGAAACAGCTTTCCGAGGATATTGCCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E315508" ref_strand="+" ref_description="SGN-E315508 [cTOA-22-L20]">
      <seq>ctgcacgaatcaatgaaatgttttctgttgctaggagaaatgctccagcttttgtatttatagatgagattgatgctattgctggaaggcatgcaagaaaggatccacgcaggaaggcaacatttgaggctctgatttctcagcttgacggggagaaagaaaaaactggtgttgataggttttcactaagacaagctgtcatattcatttgtgcaaccaatcggccagatgaactggacttagaatttgtcccgccctggacgtattgacagacgtgtgtatattggtttaccagatgcaaagcaacgagtgcaaatttttgggagtcacagtgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="24995" stop="27807"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25295" g_stop="25335" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25336" i_stop="26551" i_length="1216">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26552" g_stop="26664" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="154" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26665" i_stop="27326" i_length="662">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.880" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27327" g_stop="27507" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="336" r_length="182" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E315508" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>335</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E315508" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25295" e_stop="25335"/>
          <exon e_start="26552" e_stop="26664"/>
          <exon e_start="27327" e_stop="27507"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCACGAATCAATGAAATGTTTTCTGTTGCTAGGAGAAATGTAAGTCTACTTCTTCTAATAAAAAAATTGACATCATATAGGGATGGGAATGTTCCTCAAAGTAAAAAAATTGCATCTTATGATTTCTATACCGAAAGCAGCTACCAGTCAAATGTTAAAGGGGGTGGGGGGGGGGGGGGGTAAGTCTCCAAGGAAACTTCTAAACCAGTAACAAATATTCAGTCTAACTCAAAACCAGAAACTTATTTTTGTCTAGTGTGCTTTTACGATGCATTAAGCATAAGTTACTTTAGCTGTTAGTCTTTTTTCAATTTATGTTAAACTCTTGGTCTCACTATTTGAAGTTTGAACCAAACACGAATAACCAGGTCTTGAGCATGCTGAGTAACTACTGGGGATGAAGTACAACAACAACAATCCAGTATATTCCCTCATGTGGAGTCTGTGGAGGGTCAGGTGTACGCAGATTCCTACCTTGAGGGGGTATAGAGGTTGTTTTCCGATATACCCTTGGTTCGAGAATAGTTTTGAAAGAAGAACAAGAGTAAAAATCAATGATGAGGATAATGAAGAAAGTAAAGCACTGAGAGTAAAATAGTGTAGATAACCAAAGTAAATGAAACATCACCAGTGTTTTGGAGAGTGAGAAGCGGAAAAGAGCGACAAGGGCTCGGCGTGAAGCAAAGCACACTTCTTTCAACTGAACTGCTATTCAATACAAAAATAAAGAAATATCAAATATGTTTTACTATCTTACCTAATTTGGCCCACTTCGTGCCCCAGAAGGTAGCACTTAATACGAAAATATTAGCCATGTGGGTGCATATACTGGCTGGTACTTCTTGCGGTAGCGGAAGCTATTTGTGTCTACTAAGATCGTAGATGTTTTGATACCATGTGAAAATAATTAAAAAACTTCTCATGAACTTGATTAACAAGGTACAAGAGGTGGTCCTTATAGGAGTATTAGGTTACATATAGTAAGAAGGTAATCGATCTCTATGCTGATAAGGTTAATAAATTCTATTTATTAAATACAATATATGCTAAGGTACCTTATAAATTTTTTAAAATGAATTTCCTTGGGTTGAGGCCCTTTTCCCAACCCTACTGCATTTATGACCGGTCTGCCTTTTTTTTTTAATGTACAAGAAACAAGATTATATGAATCTAGACACATATTTACTCGTAATTCAACAATTTACTTTTGCTAATTCAAGGGGATAAAATTTACATTCAGTTGTCCTCTTTGTAGGCTCCAGCTTTTGTATTTATAGATGAGATTGATGCTATTGCTGGAAGGCATGCAAGAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTGATTTCTCAGCTTGACGGGGAGTGAGTATCGTAATCTCATTTCATGGATATAATACTCTTCTTTGCAATGAAAATTTCATATTGGAGAACACTATAGTACAGCTGTTTTTGATGAGATCTGATTCTAGAATCTTATTCTGCAGTCTGGTTGATATGGCTTCTCAAAGAAGAACATTTCCCTTTCTTCCCTACCCTGTCTACAATCTTTAGCCAGTGAAATCTTTTGCTGTTGAATTATGCATTTTTATATTATGAGGCAATGAAAAATCTTGTGAACTTTGGAGTCTTTTGCTCTTTTTGTCGAACTATGAACAAATATGAGTTAATGTGTCTTGGCAAATTGACTAACTTGCAGCACCTAACAGTTTAATTAATATGTGGACATCACTTTATAATGTCCTTTAAGTGTTGTTTCAAAGAAGAGAAAATATGACGCATGTTCTGTTTGCATCTTCTGTTACGAGTTAGCAATATTTTCTCATACTGGAAACGCCAAGATTTCTGTGATTATTTATTTTGGTATGTTTATCAAGTGTACTGCTAGAGATAGAAATTACAGTAACATGCCTAGCAAAAAAGATTACTCTAATATTCTAGAGAAGTATTGAAGGCAAAGCCATTTTTTCTCTCCTATATCCCTGTATGGTTGTGCAGCCAAGATAATAAAGGACTTGTTTGTGCAGGAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGTCATATTCATTTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGT-CCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGAGTTCACAGTGCT</genome_strand>
        <mrna_strand>CTGCACGAATCAATGAAATGTTTTCTGTTGCTAGGAGAAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCAGCTTTTGTATTTATAGATGAGATTGATGCTATTGCTGGAAGGCATGCAAGAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTGATTTCTCAGCTTGACGGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGTCATATTCATTTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGTCCCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGGAGTCACAGTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E365904" ref_strand="+" ref_description="SGN-E365904 [cLPT-11-D11]">
      <seq>gaaggcatgcaataaaggatccacgcaggaaggcaacatttgaggctcttatttctcagcttgacggggagaaagaaaaaactggtgttgataggttttcactaagacaagctgtcatatttatctgtgcaaccaatcggccagatgaactggacttagaatttgtccgccctggacgtattgacagacgtgtgtatattggtttaccagatgcaaagcaacgagtgcaaatttttggagttcacagtgctgggaaacagctttccgaggatattgcctttgagaaacttgtctttcgtacagttggatattctggggcagacataagaaatctagtcaatgaagctggaataatgtctgtaagaaaaggacattctaagatcaaccagcaggatatcgtcgatgttttggacaagcaattgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="26295" stop="30347"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26595" g_stop="26664" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26665" i_stop="27326" i_length="662">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.880" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="27327" g_stop="27543" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="287" r_length="217" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="27544" i_stop="28897" i_length="1354">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28898" g_stop="28969" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="359" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28970" i_stop="29982" i_length="1013">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.164" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29983" g_stop="30047" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="424" r_length="65" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E365904" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E365904" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26595" e_stop="26664"/>
          <exon e_start="27327" e_stop="27543"/>
          <exon e_start="28898" e_stop="28969"/>
          <exon e_start="29983" e_stop="30047"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGGCATGCAAGAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTGATTTCTCAGCTTGACGGGGAGTGAGTATCGTAATCTCATTTCATGGATATAATACTCTTCTTTGCAATGAAAATTTCATATTGGAGAACACTATAGTACAGCTGTTTTTGATGAGATCTGATTCTAGAATCTTATTCTGCAGTCTGGTTGATATGGCTTCTCAAAGAAGAACATTTCCCTTTCTTCCCTACCCTGTCTACAATCTTTAGCCAGTGAAATCTTTTGCTGTTGAATTATGCATTTTTATATTATGAGGCAATGAAAAATCTTGTGAACTTTGGAGTCTTTTGCTCTTTTTGTCGAACTATGAACAAATATGAGTTAATGTGTCTTGGCAAATTGACTAACTTGCAGCACCTAACAGTTTAATTAATATGTGGACATCACTTTATAATGTCCTTTAAGTGTTGTTTCAAAGAAGAGAAAATATGACGCATGTTCTGTTTGCATCTTCTGTTACGAGTTAGCAATATTTTCTCATACTGGAAACGCCAAGATTTCTGTGATTATTTATTTTGGTATGTTTATCAAGTGTACTGCTAGAGATAGAAATTACAGTAACATGCCTAGCAAAAAAGATTACTCTAATATTCTAGAGAAGTATTGAAGGCAAAGCCATTTTTTCTCTCCTATATCCCTGTATGGTTGTGCAGCCAAGATAATAAAGGACTTGTTTGTGCAGGAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGTCATATTCATTTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGTCCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGAGTTCACAGTGCTGGGAAACAGCTTTCCGAGGATATTGCCTTTGAGAAAGTAAATCACTTGCTTCATTACCCCTTTTTTTCCACTAATCCATTCATTCTTATTCATTACTGAGTCATTAAGTAATAAAAGCTACAAATGTAACATTTTTTTCAACCCAACAAAAGCACTACCCTTTAACTTGCCCAAAATCCAAACAACCCCAAACACCTGTCTAAGAACTAGTAAATTCGGCAACAGCCTTAGAGCGTGTTTGGTTTGACTTATTTTAGGTGCTTTTAAGATAAAATAGTTTTATAGCAGTTTTGGAGTGTTTGGATAAAATAAAAAAATGGTTTGGACTTGGGACTTCCATGTTGGATGTCTCAAGTTCGAAACCCCTTGCTAGCGAAAGAAAGGGGTTTGCCTTCTGGGTCGAGCTCGTCGCATCGGGCTTGCCTAGTGCTGGTTACCTCTCCTATGTAGTTTATTGCATAGGAGCGGGAGTTTTACCTTGTGCGGACCCAAAGGGTAGCGGCTGCGGGTTTCCCTTGTCATTAGAAAAAAAAAGTGCTTATAAGCACCTGTTTTAAGCCAAAATAACATAAATAACTTATGGCTTATAAGTCATAAGCCAAAAGCCAATCCAAACAGGCTCTTTGTCCTCTTAGTTCAGAAACATCATGTTTAGCCAACTCACCGGACAACAAAAGCCTAACAGCAGTCTGAATTTCCCTAGAAGTGATAGTAGGCTTCTTATTATACCTAGCCAATCTTGAAGACTCCTGAGCAAGCTTCTCAACTATATCATTGATGAAATTGTTCATGTTCCCCATAGTCTTGCTTGAAATATCAATATCTGGGTGAACTTGATTCAGCACCTTGAAAATGTAGATGTAAGTCTCAACAGTCAACACTCTTTTCATTGTCAGCACCACCAGCACCTGATTTCTTTGGTAACTTCTTCCCTGCCCTTGGATTCTTCTCTGCTGGTGCTTTTTCAGCCTTTCCTCCTCTGTTGCTGCTGGTTTCCTCTCTGCTGGATTTTTATCTGCTTTTTGTGCCAATGAAACAGAAATTCAGAATCTGAAAATGGGTTACTAAGAAAAGGGAAGTAAAAGATTCTTGGCTTGTGAAATGAGTTTGTCTTGGTGCTTCATTAGTTCTCATTGTTGGCTTGGGATCTCCTCTTCCAGTTGATTTGCTTGAATGTAAAATTACTTTCACGTTATATACAGCTTCTTTCAAGGGTTAGCAGCAACACTACTGCAGTGTAGTAACTGCACATGCCAAAAGCTAGTTGTTCCTTTCTTGTACTTAGTTGCTAGAAGACAATGATGTTCTTTTTGTTAGACTTAATGTATGCTCCATTTGGGCTCAGGTTTAGGAATTTGATTGTTGAACTGTATTCCTTGCACTTCTGCAGCTTGTCTTTCGTACAGTTGGATATTCTGGGGCAGACATAAGAAATCTAGTCAATGAAGCTGGAATAATGTCTGTAAGTTTGTTCTTTGTATTTTCCGTTGATATATAACGTCTCTACTCACTTTTGGAGCTTCATATTAGTTGACGGTTGACCTATTGTTTTCTTGACAAGTTCTGTTATCTTAAACAATGTATGTTATTGACAATTGACTTCAAATAATTAACATTGAGACTTGTAGAACACAACATACATTTTTTTCTTGTAAAAATGTATATTAGATTGCATATTTGAGATCATGTAATTAGCTTTTTGCTGTAACGGTAGACTTCACAGCATGATTTTCTTGGGAAAAAAAAAAGAAAATTTAATGGTGGATAGCGAGGAGTTTACCTTTTGGATCGAGCTCGTCGCATTGGGCCTGCCTAGTGCGGGTTAACTCTCTTGTGTGGTTTGCGAGTATTGCATAGGAGCAAGAGTTTTACCTTGTGTGCACCCAAAGAGTAGCGAGTGTAAGTTTCCCTTGACATCAAAAAATTAGGTGGTGGATAGGAAAACATAGAATATTTTAAGAGAAGTAAATGAGGCAAGCTTAGGTGGCTCCGACTGAAAGTTGTTGAGCAGATTCCTGGAAAGTAAACCAACGAGCTGTCACCACAAGTGCCTTTTAAAATCACCTTTCTTAATGATCAATTTATCTATAGCAGGGGAAAACACAAACCATAAAATTGATTAAAACATCTTCTCAGGCACCCTTATAACTTAAGTGCATGCATCGCCTAACCTCCACCTTAACTCCTCCATCACATACCAATATCAAACAGACACTGATAAATCCAAACTTCGACGACTGATTAAACTAATTAAAACTTAAAATATATGTGATATATGCTAACTACTGTCCTCATTAGGAATCATTATTATAAGATTAAGGCTCGGTTAATCCAAGTTGAAATAGGGTGTCTTTCCAGTTTCACTCTTTTTAAATAGGGTGTCTTATCACTTATGTATGGAGGGAAGATGTTTTCCTCAAGGACAATCATGTTTTCTGGCTTTCCATTTTCTTGAGAGTGGTAGCTTACATGCAGGTAAGAAAAGGACATTCTAAGATCAACCAGCAGGATATCGTCGATGTTTTGGACAAGCAATTGCT</genome_strand>
        <mrna_strand>GAAGGCATGCAATAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTTATTTCTCAGCTTGACGGGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGTCATATTTATCTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGTCCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGAGTTCACAGTGCTGGGAAACAGCTTTCCGAGGATATTGCCTTTGAGAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCTTTCGTACAGTTGGATATTCTGGGGCAGACATAAGAAATCTAGTCAATGAAGCTGGAATAATGTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGAAAAGGACATTCTAAGATCAACCAGCAGGATATCGTCGATGTTTTGGACAAGCAATTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E464936" ref_strand="+" ref_description="SGN-E464936 [cPRO-19-H13]">
      <seq>gtcatattcatctgtgcaaccaatcggccagatgaactggacttagaatttgtccgccctggacgtattgacagacgtgtgtatattggtttaccagatgcaaagcaacgagtgcaaatttttggagttcacagtgctgggaaacagctttccgaggatattgcctttgagaaacttgtctttcgtacagttggatattctggggcagacataagaaatctagtcaatgaagctggaataatgtctgtaagaaaaggacattctaagatcaaccagcaggatatcgtcgatgttttggacaagcaattgcttgagggtatgggtgttctcctgacagaggaagagcagcagaagtgtgagcaaagtgtatctcgtgaaaaaagacaattgttggcagtacatgaagctggtcacattgtgttggcgcacttgttccctcagtttgattggcatgctttttctcagcttctacctgngggaaaggaaactgcagtatcagttttctaccctagagaagatgtggttgatcaaggttatacaacctttggctacatgaaaatgcaaatggtagtagctcatggcgggcgctgtgccgaacgtattgtatttggtgatgacattactgatggaggagtagatgatctagaaaagattaccaagattgctcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="27070" stop="30880"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27370" g_stop="27543" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="174" r_length="174" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27544" i_stop="28897" i_length="1354">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.946" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28898" g_stop="28969" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="246" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28970" i_stop="29982" i_length="1013">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.164" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="29983" g_stop="30102" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="366" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30103" i_stop="30184" i_length="82">
            <donor d_prob="0.918" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30185" g_stop="30301" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="483" r_length="117" r_score="0.966"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30302" i_stop="30395" i_length="94">
            <donor d_prob="0.972" d_score="0.96"/>
            <acceptor a_prob="0.965" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="30396" g_stop="30572" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="660" r_length="177" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E464936" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E464936" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27370" e_stop="27543"/>
          <exon e_start="28898" e_stop="28969"/>
          <exon e_start="29983" e_stop="30102"/>
          <exon e_start="30185" e_stop="30301"/>
          <exon e_start="30396" e_stop="30572"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCATATTCATTTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGTCCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGAGTTCACAGTGCTGGGAAACAGCTTTCCGAGGATATTGCCTTTGAGAAAGTAAATCACTTGCTTCATTACCCCTTTTTTTCCACTAATCCATTCATTCTTATTCATTACTGAGTCATTAAGTAATAAAAGCTACAAATGTAACATTTTTTTCAACCCAACAAAAGCACTACCCTTTAACTTGCCCAAAATCCAAACAACCCCAAACACCTGTCTAAGAACTAGTAAATTCGGCAACAGCCTTAGAGCGTGTTTGGTTTGACTTATTTTAGGTGCTTTTAAGATAAAATAGTTTTATAGCAGTTTTGGAGTGTTTGGATAAAATAAAAAAATGGTTTGGACTTGGGACTTCCATGTTGGATGTCTCAAGTTCGAAACCCCTTGCTAGCGAAAGAAAGGGGTTTGCCTTCTGGGTCGAGCTCGTCGCATCGGGCTTGCCTAGTGCTGGTTACCTCTCCTATGTAGTTTATTGCATAGGAGCGGGAGTTTTACCTTGTGCGGACCCAAAGGGTAGCGGCTGCGGGTTTCCCTTGTCATTAGAAAAAAAAAGTGCTTATAAGCACCTGTTTTAAGCCAAAATAACATAAATAACTTATGGCTTATAAGTCATAAGCCAAAAGCCAATCCAAACAGGCTCTTTGTCCTCTTAGTTCAGAAACATCATGTTTAGCCAACTCACCGGACAACAAAAGCCTAACAGCAGTCTGAATTTCCCTAGAAGTGATAGTAGGCTTCTTATTATACCTAGCCAATCTTGAAGACTCCTGAGCAAGCTTCTCAACTATATCATTGATGAAATTGTTCATGTTCCCCATAGTCTTGCTTGAAATATCAATATCTGGGTGAACTTGATTCAGCACCTTGAAAATGTAGATGTAAGTCTCAACAGTCAACACTCTTTTCATTGTCAGCACCACCAGCACCTGATTTCTTTGGTAACTTCTTCCCTGCCCTTGGATTCTTCTCTGCTGGTGCTTTTTCAGCCTTTCCTCCTCTGTTGCTGCTGGTTTCCTCTCTGCTGGATTTTTATCTGCTTTTTGTGCCAATGAAACAGAAATTCAGAATCTGAAAATGGGTTACTAAGAAAAGGGAAGTAAAAGATTCTTGGCTTGTGAAATGAGTTTGTCTTGGTGCTTCATTAGTTCTCATTGTTGGCTTGGGATCTCCTCTTCCAGTTGATTTGCTTGAATGTAAAATTACTTTCACGTTATATACAGCTTCTTTCAAGGGTTAGCAGCAACACTACTGCAGTGTAGTAACTGCACATGCCAAAAGCTAGTTGTTCCTTTCTTGTACTTAGTTGCTAGAAGACAATGATGTTCTTTTTGTTAGACTTAATGTATGCTCCATTTGGGCTCAGGTTTAGGAATTTGATTGTTGAACTGTATTCCTTGCACTTCTGCAGCTTGTCTTTCGTACAGTTGGATATTCTGGGGCAGACATAAGAAATCTAGTCAATGAAGCTGGAATAATGTCTGTAAGTTTGTTCTTTGTATTTTCCGTTGATATATAACGTCTCTACTCACTTTTGGAGCTTCATATTAGTTGACGGTTGACCTATTGTTTTCTTGACAAGTTCTGTTATCTTAAACAATGTATGTTATTGACAATTGACTTCAAATAATTAACATTGAGACTTGTAGAACACAACATACATTTTTTTCTTGTAAAAATGTATATTAGATTGCATATTTGAGATCATGTAATTAGCTTTTTGCTGTAACGGTAGACTTCACAGCATGATTTTCTTGGGAAAAAAAAAAGAAAATTTAATGGTGGATAGCGAGGAGTTTACCTTTTGGATCGAGCTCGTCGCATTGGGCCTGCCTAGTGCGGGTTAACTCTCTTGTGTGGTTTGCGAGTATTGCATAGGAGCAAGAGTTTTACCTTGTGTGCACCCAAAGAGTAGCGAGTGTAAGTTTCCCTTGACATCAAAAAATTAGGTGGTGGATAGGAAAACATAGAATATTTTAAGAGAAGTAAATGAGGCAAGCTTAGGTGGCTCCGACTGAAAGTTGTTGAGCAGATTCCTGGAAAGTAAACCAACGAGCTGTCACCACAAGTGCCTTTTAAAATCACCTTTCTTAATGATCAATTTATCTATAGCAGGGGAAAACACAAACCATAAAATTGATTAAAACATCTTCTCAGGCACCCTTATAACTTAAGTGCATGCATCGCCTAACCTCCACCTTAACTCCTCCATCACATACCAATATCAAACAGACACTGATAAATCCAAACTTCGACGACTGATTAAACTAATTAAAACTTAAAATATATGTGATATATGCTAACTACTGTCCTCATTAGGAATCATTATTATAAGATTAAGGCTCGGTTAATCCAAGTTGAAATAGGGTGTCTTTCCAGTTTCACTCTTTTTAAATAGGGTGTCTTATCACTTATGTATGGAGGGAAGATGTTTTCCTCAAGGACAATCATGTTTTCTGGCTTTCCATTTTCTTGAGAGTGGTAGCTTACATGCAGGTAAGAAAAGGACATTCTAAGATCAACCAGCAGGATATCGTCGATGTTTTGGACAAGCAATTGCTTGAGGGTATGGGTGTTCTACTGACAGAGGAAGAGCAGCAGAAGTGTGAGCAAAGTGTATGCAATCTTACCCTGTTGCTCCTAAAAAGAACAAGATGTATTGGTTTATTGTTTTGATCGATTTGAAAATTTGTAATAGGTATCTCGCGAAAAAAGACAACTGTTGGCAGTACATGAAGCTGGTCACATTGTGTTGGCGCACTTGTTCCCTCAGTTTGATTGGCATGCTTTTTCTCAGCTTCTACCTGGGGGCAAGGTGTATTATGTTTTCTGTGAACATAAGTTGTGTCATATTCATTCCAAGCTTTTGTTGACTCCAGTACTCAACTGTTGCTCGTTTGTCTGACCAGGAAACTGCTGTATCAGTTTTCTACCCTAGAGAAGATGTGGTTGATCAAGGTTATACAACCTTTGGCTACATGAAAATGCAAATGGTAGTAGCTCATGGCGGGCGCTGTGCCGAACGTATTGTATTTGGTGATGACATTACTGATGGAGGAGTAGATGATCTAGAAAAGATTACCAAG</genome_strand>
        <mrna_strand>GTCATATTCATCTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGTCCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGAGTTCACAGTGCTGGGAAACAGCTTTCCGAGGATATTGCCTTTGAGAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGTCTTTCGTACAGTTGGATATTCTGGGGCAGACATAAGAAATCTAGTCAATGAAGCTGGAATAATGTCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGAAAAGGACATTCTAAGATCAACCAGCAGGATATCGTCGATGTTTTGGACAAGCAATTGCTTGAGGGTATGGGTGTTCTCCTGACAGAGGAAGAGCAGCAGAAGTGTGAGCAAAGT..................................................................................GTATCTCGTGAAAAAAGACAATTGTTGGCAGTACATGAAGCTGGTCACATTGTGTTGGCGCACTTGTTCCCTCAGTTTGATTGGCATGCTTTTTCTCAGCTTCTACCTGNGGGAAAG..............................................................................................GAAACTGCAGTATCAGTTTTCTACCCTAGAGAAGATGTGGTTGATCAAGGTTATACAACCTTTGGCTACATGAAAATGCAAATGGTAGTAGCTCATGGCGGGCGCTGTGCCGAACGTATTGTATTTGGTGATGACATTACTGATGGAGGAGTAGATGATCTAGAAAAGATTACCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E598608" ref_strand="+" ref_description="SGN-E598608 [74282]">
      <seq>ctcagcttctacctgggggaaaggaaactgcagtatcagttttctaccctaggagaagatgtggttgatcaaggttatacaacctttggctacatgaaaatgcaaatggtagtagctcatggcgggcgctgtgccgaacgtattgtatttggtgatgacattactgatggaggagtagatgatctagaaaagattaccaagattgctcgggaaatggtgataagtcctagaaactctaggttgggcctcacttctttgacaaaaaaaataggattgggtgatctgcctgacagtcctgatggtgagattataaaatataagtgggatgatcctcatataattcctgctgatatgacagttgaagttgctgagctatttactcgtgaattgacaaggtatattgatgagacggaggaacttgcaatgagggggttattggccaacaggcatatactggatttgatttccaatgagcttcttgaacactcaagaataactggattggaagtagaagacaaacatgagagggttacggcctgccatgtttgaagattttgtgaagcctttccaaataaacatggaggacgaaggacattgcctcataatgaccgtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="29979" stop="36742"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30279" g_stop="30301" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30302" i_stop="30395" i_length="94">
            <donor d_prob="0.972" d_score="0.00"/>
            <acceptor a_prob="0.965" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30396" g_stop="30572" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="201" r_length="178" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30573" i_stop="31311" i_length="739">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31312" g_stop="31431" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="321" r_length="120" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31432" i_stop="31539" i_length="108">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31540" g_stop="31614" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="396" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="31615" i_stop="32291" i_length="677">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="32292" g_stop="32399" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="397" r_stop="504" r_length="108" r_score="0.972"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="32400" i_stop="35980" i_length="3581">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="35981" g_stop="36061" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="586" r_length="82" r_score="0.938"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="36062" i_stop="36412" i_length="351">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="36413" g_stop="36442" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="587" r_stop="615" r_length="29" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E598608" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E598608" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30279" e_stop="30301"/>
          <exon e_start="30396" e_stop="30572"/>
          <exon e_start="31312" e_stop="31431"/>
          <exon e_start="31540" e_stop="31614"/>
          <exon e_start="32292" e_stop="32399"/>
          <exon e_start="35981" e_stop="36061"/>
          <exon e_start="36413" e_stop="36442"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAGCTTCTACCTGGGGGCAAGGTGTATTATGTTTTCTGTGAACATAAGTTGTGTCATATTCATTCCAAGCTTTTGTTGACTCCAGTACTCAACTGTTGCTCGTTTGTCTGACCAGGAAACTGCTGTATCAGTTTTCTACCCTA-GAGAAGATGTGGTTGATCAAGGTTATACAACCTTTGGCTACATGAAAATGCAAATGGTAGTAGCTCATGGCGGGCGCTGTGCCGAACGTATTGTATTTGGTGATGACATTACTGATGGAGGAGTAGATGATCTAGAAAAGATTACCAAGGTAGACACCATTTCTTCAAATGTTGCAACATCCAGTAGTGACCGATGAAGTACTCTTGATTTTACCCTTTGTTGTGTTGGTTGTGCTGGTAGCAAAACTATAGGGTGGTGGGGTAGTACATTTTATTGGCACATGAATGTTGTTGAATCTCACGTCAATGGTGGGATTGGGTACTTGGCCTCCTTATATGGTCTTGCAATCCACACCTCTTGAACTAGCTTATTGTGTTGAGTTAGGCCTAAGGTCAATTTCTTATCTTGGTATCAAATTCAGACCTATCCAAATTCTTGGTTTACATGATGTCGAGCACCCATTTATATTGTTTACGCTCCAGTTGGCAGGTCTGAGCATCGCAGTGGGTGGGGGGTGGGGATGTTGAATCCCACATAGGCGGTGGGATGGGGACTTGATCTACTTATATGGTCTTGGGAAATTCTCAGATCTTTAGCTAGTTTTTCGGGGTTGAATCACGCCGAAAGTCCATTTTGTACAAATGTTCTTGAGGTGTGGAGGAAGATAAAATTTAAGGTATTGAGGAAATTACAACATCATGAATGTGGATTATTATTAACAAAATCTTTGCTGGCCTTTTACATACCTACATATCTGTATGTTAGTACAAATGTGTGTATATATGCTAACTTTGCCTTGGCTGGCGTTAGTAGTGGGGAGGTGAAGAAGGGACAATTTTTGAGTATGTGATTGCTGTGAACTCAAATTTTTACTACTTCTATGCCAGATTGCTCGGGAAATGGTGATAAGTCCTAGAAACTCTAGGTTGGGCCTCACTTCTTTGACAAAAAAAATAGGATTGGGTGATCGACCTGACAATCCTGATGGTGAGATTATAAAATATAAGGTATGATTCCTTTGTGAAGCATGAACTGGCTTGGTTTAATGCTTTATATTTATTTTTCACAACATATTCTCGATTCACTAACTTGTTCACCTCCTTGGATGAATTCAGTGGGATGATCCTCATATAGTTCCTGCTGATATGACAGTTGAAGTTGCTGAGCTATTTACTCGTGAATTGACAAGGGTAACTCAAATGTCTTCTCTTATGGTTATATTTGGTTATTCCGGACAACAGATTTTGTTTCTACATTTGTAATCTTTCAAAGCATGAATTTTGCTTGCGGATATACTACTTGTACCACTTGTTAAATACATCAACAATTTACAGCTGTCTAGGTGTATGCAACCAGCCACCACCCTAGCCTCTCCGCACCATTTTTTAATTAACCAGAGTGTCTGGCCCAGCTAACTCTCCACTCCGACCTAAATAGGAAAGAAATAGAATCAAACCAGGCTTCTTGATTATACAATGCAAGTTTTGAAATTTCAAGTGCCATTGGCCTTCTTCCTATGTTCTTTGGTAATAACTTGTGGAAAGGTCATCTCAAATGGTTAATGATTGCGGTACTTCTTTTACATTAATCTAGTTTTCCTTTTTCTTTTTCTTTTTGCTTTATGGCTGATTTAAATCACACAATCTAAAGCTGTAGGTCTAACTTCAGTTTCATTCTATTGCCATCAAAATACTATTAACTGCCACAAAAAAAATTGAAAACTGGAGAGCACTACAAATTCAGAAGGAAGATAGCTGCTAGCTTATTTAGTTCCATGATGCAACTTTGAGTCATCAATCTGTTACAAGTAGTTCATCTTCTACTCTTTTGCAATATAAAAGATAATCTAACTTAATTTATATCACAGTATATTGATGAGACGGAAGAACTTGCAATGAGGGGGTTATTGGCCAACAGACATATACTGGACTTGATTTCCAATGAGCTTCTTGAACACTCAAGAATAACTGGATTGGTAAGATGAACCTGCAGTTGTATTCTCTACTCCGTTAAAAATATATATGGTTAGAAATGGAAATTTATGTTTTCACCTGCTTTTCACAAATCAACTTTTTATCTCACAACAAGCAATGTTCTTCAACCAAGTGCAATTACTTTGCCTATTCTTTTCATTATTATGAATGCACAGAGTTGTATGAGTTGAGGCCTCACCAACAAGTCAATTGTATGAGTCGTTACATGCTACTTATTTTCTGATTAGTTGAGGCCTTTACTTTCAACAGTTGCTGATATGCTAGATGTATCCAATCTTTAAAGCTTAGTTTCAGGAATAGTTCTCAAAATAATAAAAGACAATATAAAAATGGTGCATCTATAAAAACTTCAAACAGTAGAAATGGTGAAAAAAATTTAATGGAAATGTTATTTTTTTTTGTGAAATAAATGGTTTCAGAAATATTCTGTGAGCCTGCAAGCAGATTTTCACATGCAATCACGCCAGAATAGGATAAAAATAGGATGGTTGAAATGGAGAAAATCTACTGCAGAGTCATGCGACCAAAGGCTACCTACCAAATTGAAAGGTAGTTCTATAAACAGTACAAGACTACAATAATAACATACACATTGTAATTCCACAAGTGGGGTAGGGTAAATGTACACAGACCTTCCACCTACCTTTGTTGGGATAGAACAGTATAAGACTAACAATATCATATGGGAGCGAGTGTTGTGCTGCTAAAGTTTAAAATATTCACAAGATGAGTATTGCGAGATGCGTATGATAAGATAGATGAGCGGCATACAAGATTAGAAATCATAAACTTACCTAGATATATTGATGTCAAGGGGGTGAGGTTCCTCAGTGGTGAACATTGGCAAAATTGAGATGGGTGGAGTTGGCCAAATGGTGGATTAAGAGTGTTTGGGTGAAGAGAAAGACCAATTTGGTGGTTGGGGCTTATTTTCTGTTTTTTTTGCTTTTGGGAAGGAGAATAATGTTTTGGGGTGGATAAGCTAGAGAATTCTTATTTCAATAGATGGTATATCCAGGGAGGGTTACCTTTTTTGGCATTACTTGTGTTCAATAGGCACATTTTGCACATAAAGCGGTCTTCAATAGGTTACACCCTTAGTTGACGTGTCTAATTAAAAACATTTGACAAGTTCAGGGGGCTGTATATGTCATCTGCCTAAATAATATTTGAACTAGCATGAGTAGTCCAACAACTAGAAGGTATATTTTGATGCTGAAATTTCTGACTATGTTCATTGTAATTCAAATGTTTTATGATTGATGGTTGGTTTCGGGATTGAAATGTTAGATTTGAGGATGAAAATATCTGGCAGAAAAAGTTGGGAGTTGATTTCCTACTTGAGACACAAAAAATTTGACTGGACTTGGAAGTGCATATAGAATGATATCGCAAGCACAAGAAAATGTATATCACATTACCTCATGATAAAGTTTTAATGGACTCTGTCACTCGTGGTATACTTAGGGAGACAATTTATGGTGTCAAAAACAATTTGCTCAACTTTGTACCCCTTAGGGGTCGTTTGGTAGAGTGTATAAGAATAATGCAAAATAGAGTGCATTAGTAATGCTTGCATTAGTAGTGCTTGCATTATTAATACTTGCATTAGTTATACAAGCATTATTTCTTATACATGTTTAGTTTGATGTACTAGAATAACAAATCTTGCATAATTACTATTTGAAAATATATGTTTACAAAAATACCCTTCACACTTTATTTATTTATACACTTTCTTGCAAGCTGCAACAAAGTCATTTGCTAAAACATCATTAACTCCTCCTCTTCTTCTTCTTCTTCTTTTTCAAAAATAATATTAAATAGTTGTACTATTGAGTCATAATATTTTTGTGAAAAGTTGGAAAAGAATTTCTTTTATCAAATTTATCGCCACAATAGTAATTTTTCTTATTAAATTATGTTGAAATTAGATTATTATTTTTTTACAAAAAATATATCTAAGAGGCCATAAAGTCTATTAAAACACCAACAAATTAAAAGACAGAAAAATAGATGAAAATGAAAACACATAACAAAGAAATTAAAAGAAAAGAAAATGTTGGGAAATGTTTCAAAAAGGCTTTGAGGGTAGTTTTGTAATTATTAATTTAATGCAAGTTTTAAATATAATGCATTGCATAATATTTTTAGAAAAAAAAAATTGTTTAAAAAATACCCTCCTTAAATATGGTGGAAAGGATAAAAAAAGTTTTTAAGGCCAATTGTGTCTTTTATAATGTTAATGCATGCATTAGAACCCATTGCATTACTAATGCATAGAAATAGATGGCATTAGTAATACACTCTTTAATACACAATAGAGTGTATTACTAACACAAGCATTAGTTATGCATTGGCTAGAAAAGTGTACCAAACAAAGTACTACTAATACATCAAACTAATGCATGCATTATTTTCTCTAATACACTCTATCAAACGACCCCTTAGAGTATTGTCAGGCTTAGAAACTCCCCAATTCCCTAATGTAAACCATATTTACTGAAAAAAAACCTATTATAAACTATTTGTATGTTCATTTTTACAAAGGGAATCTCACATAGAATTTCTTGAAAAGAATGCGTAGTGGAGCAGTATATGAGCTACACAGGTTAGTTATAATTGAACTAGCAGAGAGAAGAACCTATGTAATACCTATCATTCACGACAGAATCAAATAAGAGATATGTGTATACACCAAATGCCACTTTTAACCAAACTTTCAAGGGCTCATGGACTTAATTTGGTTCAGAAGGATTTACTTGGAACGTCAAACGAAATGGTTCCTTTATATCTTGCTATATGTAGGAAGCTGTCAAGTGCCAGAGCATTGACAAATACTAGAGAGGATCTTCTTGATAGTTAGAAAAAGAGGATGCTATGACACAAAAGGAGCCTTAGTTGAGCGAACTCTTCATTGTTGATGCCGCACCCATCTCGGATTCTTCAAAAATACACTACTTTTGGCGAATTTGACACGCACCTATTCGCATTTTTGAAGAGTCCGAGCAACATAGAAAGGAGCTCATTGTAGTACTGATACTGAAACATACATGCCAATTAACATTCTTCATTGTCGCTCCTCAAGCTGTCAGACAGTGATAAATTCAAGATTGATAATAAATTTGAAACTTGAACAGGAGATTTAAAATGACTTGCAGACTTCGTTTAATTATCACTTGGTACCTCCACAGATGTTTAGAGTGGATAACCACCTTTTGATGAGCTAATATCAATTAGTTTAAGCCTTGATAAACTGTTTCAAATGCATATTTCAATTTGTTTCCACATTACCAAGATTCAGGAAACTGGTAGTTTTTCCAAGCAAAACATTGAACATTTTAACTCTTATCCTCTGGCAGCTTTATTTGGGCAATACTGCCTGGAATGGTAAAAATTTAACCATTTTGCCACCCGTAACCTATACTTATAGGTTTTTTTAGAACAGAGAATACCTGATAATTTTCATCAAAATCTCCAAGTGTACTCCCAGTTTGTTTAGCTTGTCTACATCTTTTGTTTGCATCCTTATTTCTGTTGACACCCTCTGTTGCTTCTTCAGGAAGTAGAAGACAAA-ATGAGAGGGTTACAGCCTGCCATGTTCGAAGATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAGGTAATATAATATTTTCAGATTCTCAATCTTCATATTTACTTTCAAGAGATAATGTGAAGTCTTTATAACAATACCATTCTCTTTAGAAACGTGAGAATAGGGATAATATAGAATGTGTACAATGCAACCCAGTAATATGTCTGCTGTTATTTTTGTTTTAAACATCCTGTTGCTTTGCATGACGGGGATGGGGCTCTCAAAGTAGATTGTACGAGGCTTGTCGCGTGCTTTTGCTTAATGATCTGAGTCAGGGGCAACCTTCTTCCTTGTGAATATTTTTAGCTCGCAATCTCATGCAGATTTTGATTTTCTCAATTGTACTGTGCCTATAAAAATGTTTTAAATTCTCAGGAAGGACCATTGCCTCATAATGACCGTTTG</genome_strand>
        <mrna_strand>CTCAGCTTCTACCTGGGGGAAAG..............................................................................................GAAACTGCAGTATCAGTTTTCTACCCTAGGAGAAGATGTGGTTGATCAAGGTTATACAACCTTTGGCTACATGAAAATGCAAATGGTAGTAGCTCATGGCGGGCGCTGTGCCGAACGTATTGTATTTGGTGATGACATTACTGATGGAGGAGTAGATGATCTAGAAAAGATTACCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCTCGGGAAATGGTGATAAGTCCTAGAAACTCTAGGTTGGGCCTCACTTCTTTGACAAAAAAAATAGGATTGGGTGATCTGCCTGACAGTCCTGATGGTGAGATTATAAAATATAAG............................................................................................................TGGGATGATCCTCATATAATTCCTGCTGATATGACAGTTGAAGTTGCTGAGCTATTTACTCGTGAATTGACAAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTGATGAGACGGAGGAACTTGCAATGAGGGGGTTATTGGCCAACAGGCATATACTGGATTTGATTTCCAATGAGCTTCTTGAACACTCAAGAATAACTGGATTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTAGAAGACAAACATGAGAGGGTTACGGCCTGCCATGTTTGAAGATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAC...............................................................................................................................................................................................................................................................................................................................................................GAAGGA-CATTGCCTCATAATGACCGTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E425617" ref_strand="-" ref_description="SGN-E425617 [STM-45-G18]">
      <seq>cgggaaatggtgataagtcctagaaactctaggtggggctcacttctttgacaaaaaaaataggattgggtgatcagcctgacagtcctgatggtgagattataaaatataagtgggatgatcctcatataattcctgctgatatgacagttgaagttgctgagctatttactcgtgaattgacaaggtatattgatgagacggaggaacttgcaatgagggggttattggccaacaggcatatactggatttgatttccaatgagcttcttgaacactcaagaataactggattggaagtagaagacaaaatgagagggttacggcctgccatgtttgaagattttgtgaagcctttccaaataaacatggaggaggaaggaccattgcctcataatgaccgtttgagttatcaaccgctggacatttatcccgcgcccctccacagaagttaacatcaatggtggttgtatgagttttctagtcagatcgacatcggaagttgccaagtaatgaatgttgaggtgtagagataatgtcctttttcacatcaactctgaccaatacctttgcaaaccaacagaaagcgtgcttagtagatagttaggttgggttgcaattgcttcatcttttattatttttcttctttccttcttttgctctcttttcttttcccttcaatttatttcatggtctatatagaggaacttcgtacaagaaagaccaatgagaattcagtatgtaaaatttggctatttatttataaaataaattaatgttaaggaaaaaaaaggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="31018" stop="37111"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="31318" g_stop="31431" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="113" r_length="113" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="31432" i_stop="31539" i_length="108">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31540" g_stop="31614" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="114" r_stop="188" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31615" i_stop="32291" i_length="677">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="32292" g_stop="32399" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="296" r_length="108" r_score="0.972"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="32400" i_stop="35980" i_length="3581">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="35981" g_stop="36061" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="377" r_length="81" r_score="0.975"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="36062" i_stop="36412" i_length="351">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="36413" g_stop="36808" g_length="396"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="760" r_length="383" r_score="0.899"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E425617" ref_strand="-">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>774</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E425617" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="31318" e_stop="31431"/>
          <exon e_start="31540" e_stop="31614"/>
          <exon e_start="32292" e_stop="32399"/>
          <exon e_start="35981" e_stop="36061"/>
          <exon e_start="36413" e_stop="36808"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGGAAATGGTGATAAGTCCTAGAAACTCTAGGTTGGGCCTCACTTCTTTGACAAAAAAAATAGGATTGGGTGATCGACCTGACAATCCTGATGGTGAGATTATAAAATATAAGGTATGATTCCTTTGTGAAGCATGAACTGGCTTGGTTTAATGCTTTATATTTATTTTTCACAACATATTCTCGATTCACTAACTTGTTCACCTCCTTGGATGAATTCAGTGGGATGATCCTCATATAGTTCCTGCTGATATGACAGTTGAAGTTGCTGAGCTATTTACTCGTGAATTGACAAGGGTAACTCAAATGTCTTCTCTTATGGTTATATTTGGTTATTCCGGACAACAGATTTTGTTTCTACATTTGTAATCTTTCAAAGCATGAATTTTGCTTGCGGATATACTACTTGTACCACTTGTTAAATACATCAACAATTTACAGCTGTCTAGGTGTATGCAACCAGCCACCACCCTAGCCTCTCCGCACCATTTTTTAATTAACCAGAGTGTCTGGCCCAGCTAACTCTCCACTCCGACCTAAATAGGAAAGAAATAGAATCAAACCAGGCTTCTTGATTATACAATGCAAGTTTTGAAATTTCAAGTGCCATTGGCCTTCTTCCTATGTTCTTTGGTAATAACTTGTGGAAAGGTCATCTCAAATGGTTAATGATTGCGGTACTTCTTTTACATTAATCTAGTTTTCCTTTTTCTTTTTCTTTTTGCTTTATGGCTGATTTAAATCACACAATCTAAAGCTGTAGGTCTAACTTCAGTTTCATTCTATTGCCATCAAAATACTATTAACTGCCACAAAAAAAATTGAAAACTGGAGAGCACTACAAATTCAGAAGGAAGATAGCTGCTAGCTTATTTAGTTCCATGATGCAACTTTGAGTCATCAATCTGTTACAAGTAGTTCATCTTCTACTCTTTTGCAATATAAAAGATAATCTAACTTAATTTATATCACAGTATATTGATGAGACGGAAGAACTTGCAATGAGGGGGTTATTGGCCAACAGACATATACTGGACTTGATTTCCAATGAGCTTCTTGAACACTCAAGAATAACTGGATTGGTAAGATGAACCTGCAGTTGTATTCTCTACTCCGTTAAAAATATATATGGTTAGAAATGGAAATTTATGTTTTCACCTGCTTTTCACAAATCAACTTTTTATCTCACAACAAGCAATGTTCTTCAACCAAGTGCAATTACTTTGCCTATTCTTTTCATTATTATGAATGCACAGAGTTGTATGAGTTGAGGCCTCACCAACAAGTCAATTGTATGAGTCGTTACATGCTACTTATTTTCTGATTAGTTGAGGCCTTTACTTTCAACAGTTGCTGATATGCTAGATGTATCCAATCTTTAAAGCTTAGTTTCAGGAATAGTTCTCAAAATAATAAAAGACAATATAAAAATGGTGCATCTATAAAAACTTCAAACAGTAGAAATGGTGAAAAAAATTTAATGGAAATGTTATTTTTTTTTGTGAAATAAATGGTTTCAGAAATATTCTGTGAGCCTGCAAGCAGATTTTCACATGCAATCACGCCAGAATAGGATAAAAATAGGATGGTTGAAATGGAGAAAATCTACTGCAGAGTCATGCGACCAAAGGCTACCTACCAAATTGAAAGGTAGTTCTATAAACAGTACAAGACTACAATAATAACATACACATTGTAATTCCACAAGTGGGGTAGGGTAAATGTACACAGACCTTCCACCTACCTTTGTTGGGATAGAACAGTATAAGACTAACAATATCATATGGGAGCGAGTGTTGTGCTGCTAAAGTTTAAAATATTCACAAGATGAGTATTGCGAGATGCGTATGATAAGATAGATGAGCGGCATACAAGATTAGAAATCATAAACTTACCTAGATATATTGATGTCAAGGGGGTGAGGTTCCTCAGTGGTGAACATTGGCAAAATTGAGATGGGTGGAGTTGGCCAAATGGTGGATTAAGAGTGTTTGGGTGAAGAGAAAGACCAATTTGGTGGTTGGGGCTTATTTTCTGTTTTTTTTGCTTTTGGGAAGGAGAATAATGTTTTGGGGTGGATAAGCTAGAGAATTCTTATTTCAATAGATGGTATATCCAGGGAGGGTTACCTTTTTTGGCATTACTTGTGTTCAATAGGCACATTTTGCACATAAAGCGGTCTTCAATAGGTTACACCCTTAGTTGACGTGTCTAATTAAAAACATTTGACAAGTTCAGGGGGCTGTATATGTCATCTGCCTAAATAATATTTGAACTAGCATGAGTAGTCCAACAACTAGAAGGTATATTTTGATGCTGAAATTTCTGACTATGTTCATTGTAATTCAAATGTTTTATGATTGATGGTTGGTTTCGGGATTGAAATGTTAGATTTGAGGATGAAAATATCTGGCAGAAAAAGTTGGGAGTTGATTTCCTACTTGAGACACAAAAAATTTGACTGGACTTGGAAGTGCATATAGAATGATATCGCAAGCACAAGAAAATGTATATCACATTACCTCATGATAAAGTTTTAATGGACTCTGTCACTCGTGGTATACTTAGGGAGACAATTTATGGTGTCAAAAACAATTTGCTCAACTTTGTACCCCTTAGGGGTCGTTTGGTAGAGTGTATAAGAATAATGCAAAATAGAGTGCATTAGTAATGCTTGCATTAGTAGTGCTTGCATTATTAATACTTGCATTAGTTATACAAGCATTATTTCTTATACATGTTTAGTTTGATGTACTAGAATAACAAATCTTGCATAATTACTATTTGAAAATATATGTTTACAAAAATACCCTTCACACTTTATTTATTTATACACTTTCTTGCAAGCTGCAACAAAGTCATTTGCTAAAACATCATTAACTCCTCCTCTTCTTCTTCTTCTTCTTTTTCAAAAATAATATTAAATAGTTGTACTATTGAGTCATAATATTTTTGTGAAAAGTTGGAAAAGAATTTCTTTTATCAAATTTATCGCCACAATAGTAATTTTTCTTATTAAATTATGTTGAAATTAGATTATTATTTTTTTACAAAAAATATATCTAAGAGGCCATAAAGTCTATTAAAACACCAACAAATTAAAAGACAGAAAAATAGATGAAAATGAAAACACATAACAAAGAAATTAAAAGAAAAGAAAATGTTGGGAAATGTTTCAAAAAGGCTTTGAGGGTAGTTTTGTAATTATTAATTTAATGCAAGTTTTAAATATAATGCATTGCATAATATTTTTAGAAAAAAAAAATTGTTTAAAAAATACCCTCCTTAAATATGGTGGAAAGGATAAAAAAAGTTTTTAAGGCCAATTGTGTCTTTTATAATGTTAATGCATGCATTAGAACCCATTGCATTACTAATGCATAGAAATAGATGGCATTAGTAATACACTCTTTAATACACAATAGAGTGTATTACTAACACAAGCATTAGTTATGCATTGGCTAGAAAAGTGTACCAAACAAAGTACTACTAATACATCAAACTAATGCATGCATTATTTTCTCTAATACACTCTATCAAACGACCCCTTAGAGTATTGTCAGGCTTAGAAACTCCCCAATTCCCTAATGTAAACCATATTTACTGAAAAAAAACCTATTATAAACTATTTGTATGTTCATTTTTACAAAGGGAATCTCACATAGAATTTCTTGAAAAGAATGCGTAGTGGAGCAGTATATGAGCTACACAGGTTAGTTATAATTGAACTAGCAGAGAGAAGAACCTATGTAATACCTATCATTCACGACAGAATCAAATAAGAGATATGTGTATACACCAAATGCCACTTTTAACCAAACTTTCAAGGGCTCATGGACTTAATTTGGTTCAGAAGGATTTACTTGGAACGTCAAACGAAATGGTTCCTTTATATCTTGCTATATGTAGGAAGCTGTCAAGTGCCAGAGCATTGACAAATACTAGAGAGGATCTTCTTGATAGTTAGAAAAAGAGGATGCTATGACACAAAAGGAGCCTTAGTTGAGCGAACTCTTCATTGTTGATGCCGCACCCATCTCGGATTCTTCAAAAATACACTACTTTTGGCGAATTTGACACGCACCTATTCGCATTTTTGAAGAGTCCGAGCAACATAGAAAGGAGCTCATTGTAGTACTGATACTGAAACATACATGCCAATTAACATTCTTCATTGTCGCTCCTCAAGCTGTCAGACAGTGATAAATTCAAGATTGATAATAAATTTGAAACTTGAACAGGAGATTTAAAATGACTTGCAGACTTCGTTTAATTATCACTTGGTACCTCCACAGATGTTTAGAGTGGATAACCACCTTTTGATGAGCTAATATCAATTAGTTTAAGCCTTGATAAACTGTTTCAAATGCATATTTCAATTTGTTTCCACATTACCAAGATTCAGGAAACTGGTAGTTTTTCCAAGCAAAACATTGAACATTTTAACTCTTATCCTCTGGCAGCTTTATTTGGGCAATACTGCCTGGAATGGTAAAAATTTAACCATTTTGCCACCCGTAACCTATACTTATAGGTTTTTTTAGAACAGAGAATACCTGATAATTTTCATCAAAATCTCCAAGTGTACTCCCAGTTTGTTTAGCTTGTCTACATCTTTTGTTTGCATCCTTATTTCTGTTGACACCCTCTGTTGCTTCTTCAGGAAGTAGAAGACAAAATGAGAGGGTTACAGCCTGCCATGTTCGAAGATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAGGTAATATAATATTTTCAGATTCTCAATCTTCATATTTACTTTCAAGAGATAATGTGAAGTCTTTATAACAATACCATTCTCTTTAGAAACGTGAGAATAGGGATAATATAGAATGTGTACAATGCAACCCAGTAATATGTCTGCTGTTATTTTTGTTTTAAACATCCTGTTGCTTTGCATGACGGGGATGGGGCTCTCAAAGTAGATTGTACGAGGCTTGTCGCGTGCTTTTGCTTAATGATCTGAGTCAGGGGCAACCTTCTTCCTTGTGAATATTTTTAGCTCGCAATCTCATGCAGATTTTGATTTTCTCAATTGTACTGTGCCTATAAAAATGTTTTAAATTCTCAGGAAGGACCATTGCCTCATAATGACCGTTTGAGTTATCAACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAACATCAATGGTGGTTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTT-AATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTAT</genome_strand>
        <mrna_strand>CGGGAAATGGTGATAAGTCCTAGAAACTCTAGGT-GGGGCTCACTTCTTTGACAAAAAAAATAGGATTGGGTGATCAGCCTGACAGTCCTGATGGTGAGATTATAAAATATAAG............................................................................................................TGGGATGATCCTCATATAATTCCTGCTGATATGACAGTTGAAGTTGCTGAGCTATTTACTCGTGAATTGACAAGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTGATGAGACGGAGGAACTTGCAATGAGGGGGTTATTGGCCAACAGGCATATACTGGATTTGATTTCCAATGAGCTTCTTGAACACTCAAGAATAACTGGATTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTAGAAGACAAAATGAGAGGGTTACGGCCTGCCATGTTTGAAGATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAG...............................................................................................................................................................................................................................................................................................................................................................GAAGGACCATTGCCTCATAATGACCGTTTGAGTTATCAACCGCTGGACATTTATCCCGCGCCCCTCCACAGAAGTTAACATCAATGGTGGTTGTATGAGTTTTCTAGTCAGATCGACATCGGAAGTTGCCAAGTAATGAATGTTGAGGTGTAGAGATAATGTCCTTTTTCACATCAACTCTGACCAATACCTTTGCAAACCAACAGAAAGCGTGCTTAGTAGATAGTTAGGTTGGGTTGCAATTGCTTCA--TCTT-TTA-TT------A---TT-TTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTCAATTTATTTCATGGTCTATATAGAGGAACTTCGTACAAGAAAGACCAATGAGAATTCAGTATGTAAAATTTGGCTATTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E607539" ref_strand="+" ref_description="SGN-E607539 [23506]">
      <seq>ctggatttgatttccaatgagcttcttgaacactcaagaataactggattggaagtagaagacaaaatgagagggttacggcctgccatgtttgaagattttgtgaagcctttccaaataaacatggaggaggaaggaccattgcctcataatgaccgtttgagttatcaaccgctggacatttatcccgcacctctccacagaagctaacatcaatggtggttttctgagttttctggtcagatcgacatcggaagttgccaagtaatgaatgttgaggtgtagagataatgtcctccttcacatcaactctgaccaatacctttgcaaaccaacagaaagcctgcttagtagatagttaggttgggttgcaattgtttcatcttttattattttggcacatttttttcttctttccttcttttgctctcttttcttttccctttaatttatttcatggtctatatagaggaacttcgtacaagaaagaccaatgagaattgaatatgtaaaatttggctatttatttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="32049" stop="37111"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="32349" g_stop="32399" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="32400" i_stop="35980" i_length="3581">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="35981" g_stop="36061" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="132" r_length="81" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36062" i_stop="36412" i_length="351">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36413" g_stop="36812" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="133" r_stop="531" r_length="399" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E607539" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E607539" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="32349" e_stop="32399"/>
          <exon e_start="35981" e_stop="36061"/>
          <exon e_start="36413" e_stop="36812"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGACTTGATTTCCAATGAGCTTCTTGAACACTCAAGAATAACTGGATTGGTAAGATGAACCTGCAGTTGTATTCTCTACTCCGTTAAAAATATATATGGTTAGAAATGGAAATTTATGTTTTCACCTGCTTTTCACAAATCAACTTTTTATCTCACAACAAGCAATGTTCTTCAACCAAGTGCAATTACTTTGCCTATTCTTTTCATTATTATGAATGCACAGAGTTGTATGAGTTGAGGCCTCACCAACAAGTCAATTGTATGAGTCGTTACATGCTACTTATTTTCTGATTAGTTGAGGCCTTTACTTTCAACAGTTGCTGATATGCTAGATGTATCCAATCTTTAAAGCTTAGTTTCAGGAATAGTTCTCAAAATAATAAAAGACAATATAAAAATGGTGCATCTATAAAAACTTCAAACAGTAGAAATGGTGAAAAAAATTTAATGGAAATGTTATTTTTTTTTGTGAAATAAATGGTTTCAGAAATATTCTGTGAGCCTGCAAGCAGATTTTCACATGCAATCACGCCAGAATAGGATAAAAATAGGATGGTTGAAATGGAGAAAATCTACTGCAGAGTCATGCGACCAAAGGCTACCTACCAAATTGAAAGGTAGTTCTATAAACAGTACAAGACTACAATAATAACATACACATTGTAATTCCACAAGTGGGGTAGGGTAAATGTACACAGACCTTCCACCTACCTTTGTTGGGATAGAACAGTATAAGACTAACAATATCATATGGGAGCGAGTGTTGTGCTGCTAAAGTTTAAAATATTCACAAGATGAGTATTGCGAGATGCGTATGATAAGATAGATGAGCGGCATACAAGATTAGAAATCATAAACTTACCTAGATATATTGATGTCAAGGGGGTGAGGTTCCTCAGTGGTGAACATTGGCAAAATTGAGATGGGTGGAGTTGGCCAAATGGTGGATTAAGAGTGTTTGGGTGAAGAGAAAGACCAATTTGGTGGTTGGGGCTTATTTTCTGTTTTTTTTGCTTTTGGGAAGGAGAATAATGTTTTGGGGTGGATAAGCTAGAGAATTCTTATTTCAATAGATGGTATATCCAGGGAGGGTTACCTTTTTTGGCATTACTTGTGTTCAATAGGCACATTTTGCACATAAAGCGGTCTTCAATAGGTTACACCCTTAGTTGACGTGTCTAATTAAAAACATTTGACAAGTTCAGGGGGCTGTATATGTCATCTGCCTAAATAATATTTGAACTAGCATGAGTAGTCCAACAACTAGAAGGTATATTTTGATGCTGAAATTTCTGACTATGTTCATTGTAATTCAAATGTTTTATGATTGATGGTTGGTTTCGGGATTGAAATGTTAGATTTGAGGATGAAAATATCTGGCAGAAAAAGTTGGGAGTTGATTTCCTACTTGAGACACAAAAAATTTGACTGGACTTGGAAGTGCATATAGAATGATATCGCAAGCACAAGAAAATGTATATCACATTACCTCATGATAAAGTTTTAATGGACTCTGTCACTCGTGGTATACTTAGGGAGACAATTTATGGTGTCAAAAACAATTTGCTCAACTTTGTACCCCTTAGGGGTCGTTTGGTAGAGTGTATAAGAATAATGCAAAATAGAGTGCATTAGTAATGCTTGCATTAGTAGTGCTTGCATTATTAATACTTGCATTAGTTATACAAGCATTATTTCTTATACATGTTTAGTTTGATGTACTAGAATAACAAATCTTGCATAATTACTATTTGAAAATATATGTTTACAAAAATACCCTTCACACTTTATTTATTTATACACTTTCTTGCAAGCTGCAACAAAGTCATTTGCTAAAACATCATTAACTCCTCCTCTTCTTCTTCTTCTTCTTTTTCAAAAATAATATTAAATAGTTGTACTATTGAGTCATAATATTTTTGTGAAAAGTTGGAAAAGAATTTCTTTTATCAAATTTATCGCCACAATAGTAATTTTTCTTATTAAATTATGTTGAAATTAGATTATTATTTTTTTACAAAAAATATATCTAAGAGGCCATAAAGTCTATTAAAACACCAACAAATTAAAAGACAGAAAAATAGATGAAAATGAAAACACATAACAAAGAAATTAAAAGAAAAGAAAATGTTGGGAAATGTTTCAAAAAGGCTTTGAGGGTAGTTTTGTAATTATTAATTTAATGCAAGTTTTAAATATAATGCATTGCATAATATTTTTAGAAAAAAAAAATTGTTTAAAAAATACCCTCCTTAAATATGGTGGAAAGGATAAAAAAAGTTTTTAAGGCCAATTGTGTCTTTTATAATGTTAATGCATGCATTAGAACCCATTGCATTACTAATGCATAGAAATAGATGGCATTAGTAATACACTCTTTAATACACAATAGAGTGTATTACTAACACAAGCATTAGTTATGCATTGGCTAGAAAAGTGTACCAAACAAAGTACTACTAATACATCAAACTAATGCATGCATTATTTTCTCTAATACACTCTATCAAACGACCCCTTAGAGTATTGTCAGGCTTAGAAACTCCCCAATTCCCTAATGTAAACCATATTTACTGAAAAAAAACCTATTATAAACTATTTGTATGTTCATTTTTACAAAGGGAATCTCACATAGAATTTCTTGAAAAGAATGCGTAGTGGAGCAGTATATGAGCTACACAGGTTAGTTATAATTGAACTAGCAGAGAGAAGAACCTATGTAATACCTATCATTCACGACAGAATCAAATAAGAGATATGTGTATACACCAAATGCCACTTTTAACCAAACTTTCAAGGGCTCATGGACTTAATTTGGTTCAGAAGGATTTACTTGGAACGTCAAACGAAATGGTTCCTTTATATCTTGCTATATGTAGGAAGCTGTCAAGTGCCAGAGCATTGACAAATACTAGAGAGGATCTTCTTGATAGTTAGAAAAAGAGGATGCTATGACACAAAAGGAGCCTTAGTTGAGCGAACTCTTCATTGTTGATGCCGCACCCATCTCGGATTCTTCAAAAATACACTACTTTTGGCGAATTTGACACGCACCTATTCGCATTTTTGAAGAGTCCGAGCAACATAGAAAGGAGCTCATTGTAGTACTGATACTGAAACATACATGCCAATTAACATTCTTCATTGTCGCTCCTCAAGCTGTCAGACAGTGATAAATTCAAGATTGATAATAAATTTGAAACTTGAACAGGAGATTTAAAATGACTTGCAGACTTCGTTTAATTATCACTTGGTACCTCCACAGATGTTTAGAGTGGATAACCACCTTTTGATGAGCTAATATCAATTAGTTTAAGCCTTGATAAACTGTTTCAAATGCATATTTCAATTTGTTTCCACATTACCAAGATTCAGGAAACTGGTAGTTTTTCCAAGCAAAACATTGAACATTTTAACTCTTATCCTCTGGCAGCTTTATTTGGGCAATACTGCCTGGAATGGTAAAAATTTAACCATTTTGCCACCCGTAACCTATACTTATAGGTTTTTTTAGAACAGAGAATACCTGATAATTTTCATCAAAATCTCCAAGTGTACTCCCAGTTTGTTTAGCTTGTCTACATCTTTTGTTTGCATCCTTATTTCTGTTGACACCCTCTGTTGCTTCTTCAGGAAGTAGAAGACAAAATGAGAGGGTTACAGCCTGCCATGTTCGAAGATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAGGTAATATAATATTTTCAGATTCTCAATCTTCATATTTACTTTCAAGAGATAATGTGAAGTCTTTATAACAATACCATTCTCTTTAGAAACGTGAGAATAGGGATAATATAGAATGTGTACAATGCAACCCAGTAATATGTCTGCTGTTATTTTTGTTTTAAACATCCTGTTGCTTTGCATGACGGGGATGGGGCTCTCAAAGTAGATTGTACGAGGCTTGTCGCGTGCTTTTGCTTAATGATCTGAGTCAGGGGCAACCTTCTTCCTTGTGAATATTTTTAGCTCGCAATCTCATGCAGATTTTGATTTTCTCAATTGTACTGTGCCTATAAAAATGTTTTAAATTCTCAGGAAGGACCATTGCCTCATAATGACCGTTTGAGTTATCAACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAACATCAATGGTGGTTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCC-TTAATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTATATAA</genome_strand>
        <mrna_strand>CTGGATTTGATTTCCAATGAGCTTCTTGAACACTCAAGAATAACTGGATTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTAGAAGACAAAATGAGAGGGTTACGGCCTGCCATGTTTGAAGATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAG...............................................................................................................................................................................................................................................................................................................................................................GAAGGACCATTGCCTCATAATGACCGTTTGAGTTATCAACCGCTGGACATTTATCCCGCACCTCTCCACAGAAGCTAACATCAATGGTGGTTTTCTGAGTTTTCTGGTCAGATCGACATCGGAAGTTGCCAAGTAATGAATGTTGAGGTGTAGAGATAATGTCCTCCTTCACATCAACTCTGACCAATACCTTTGCAAACCAACAGAAAGCCTGCTTAGTAGATAGTTAGGTTGGGTTGCAATTGTTTCATCTTTTATTATTTTGGCACA-TTTT-TTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTTAATTTATTTCATGGTCTATATAGAGGAACTTCGTACAAGAAAGACCAATGAGAATTGAATATGTAAAATTTGGCTATTTATTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E294407" ref_strand="+" ref_description="SGN-E294407 [cLET-14-E6]">
      <seq>ttacagcctgccatgttcgaagattttgtgaagcctttccaaataaacatggaggaggaaggaccattgcctcataatgaccgtttgagttatcaaccgctggacatttatcctgcgcccctccacagaagttaacatcaatggtggttgtttgagttttctggtcagaccgacatcggaagttgcctagtagtgaatgttgaggtttagagacaatgtcctttttcacatcaactctgaccaaaacctttgcaaaccaacagaaaggctgcttagtagatagtaaggttgggttgcaaatgttccattttttattatttaggcacatttttgtttcttctttccttcttttgctctcttttcttttcccttaatttatttcatggtttaaatagagcaactttgtacaagaaagaccaatgagaatcgaaaatgtaaaatttggctatttatataagttaatgttaagtaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="35705" stop="37130"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36005" g_stop="36061" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36062" i_stop="36412" i_length="351">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36413" g_stop="36823" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="468" r_length="411" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="36824" i_stop="36917" i_length="94">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="36918" g_stop="36931" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="482" r_length="14" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E294407" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E294407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36005" e_stop="36061"/>
          <exon e_start="36413" e_stop="36823"/>
          <exon e_start="36918" e_stop="36931"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACAGCCTGCCATGTTCGAAGATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAGGTAATATAATATTTTCAGATTCTCAATCTTCATATTTACTTTCAAGAGATAATGTGAAGTCTTTATAACAATACCATTCTCTTTAGAAACGTGAGAATAGGGATAATATAGAATGTGTACAATGCAACCCAGTAATATGTCTGCTGTTATTTTTGTTTTAAACATCCTGTTGCTTTGCATGACGGGGATGGGGCTCTCAAAGTAGATTGTACGAGGCTTGTCGCGTGCTTTTGCTTAATGATCTGAGTCAGGGGCAACCTTCTTCCTTGTGAATATTTTTAGCTCGCAATCTCATGCAGATTTTGATTTTCTCAATTGTACTGTGCCTATAAAAATGTTTTAAATTCTCAGGAAGGACCATTGCCTCATAATGACCGTTTGAGTTATCAACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAACATCAATGGTGGTTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTAATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTATATAAGTTAATGTTAAGTATATATTCATCCTCTCGATGTTCTCAAATGGAGTAGTAAATGTACAATACTATGACTTGTTTGAGTTATTCTCAATATTCTTATATCTATAGGTAAAAAGAAAAAA</genome_strand>
        <mrna_strand>TTACAGCCTGCCATGTTCGAAGATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAG...............................................................................................................................................................................................................................................................................................................................................................GAAGGACCATTGCCTCATAATGACCGTTTGAGTTATCAACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAACATCAATGGTGGTTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTAATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTATATAAGTTAATGTTAA..............................................................................................GTAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E341394" ref_strand="+" ref_description="SGN-E341394 [cTOE-23-B9]">
      <seq>tttgagttatcaaccgctggacatttatcctgcgttcctccacagaagttaacatcaatggtgggtgtttgagttttctggtcagaccgacatcggaagttgcctagtagtgaatgttgaggtttagagacaatgtcctttttcacatcaactctgaccaaaacctttgcaaaccaacagaaaggctgcttagtagatagtaaggttgggttgcaaatgttccattttttattatttaggcacatttttgtttcttctttccttcttttgctctcttttcttttcccttaatttatttcatggtttaaatagagcaactttgtacaagaaagaccaatgagaatcgaaaatgtaaaatttggctatttatataagttaatgttaagtatatattcaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="36139" stop="37134"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36439" g_stop="36833" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="395" r_length="395" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="36834" i_stop="36917" i_length="84">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="36918" g_stop="36929" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="407" r_length="12" r_score="0.750"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E341394" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>407</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E341394" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36439" e_stop="36833"/>
          <exon e_start="36918" e_stop="36929"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGAGTTATCAACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAACATCAATGGTGGTTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTAATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTATATAAGTTAATGTTAAGTATATATTCATCCTCTCGATGTTCTCAAATGGAGTAGTAAATGTACAATACTATGACTTGTTTGAGTTATTCTCAATATTCTTATATCTATAGGTAAAAAGAAAA</genome_strand>
        <mrna_strand>TTTGAGTTATCAACCGCTGGACATTTATCCTGCGTTCCTCCACAGAAGTTAACATCAATGGTGGGTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTAATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTATATAAGTTAATGTTAAGTATATATTC....................................................................................AAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E485600" ref_strand="+" ref_description="SGN-E485600 [cSTE-18-P21]">
      <seq>cttcacctgcttcttcactcaccggaaaagcaaaaaattaagatagggttatcgaagaaaatggcgaacagtttaattctatcgattaaggttgtgctaatatcaattggtgcaatttccttagcgatggtagcaaaagcgtcgattccattaatttattatgagctcccagcaatttggagtgtagttatagcttggcttaagcctccgtatctctactttgttatcaatggtataatcctcatcatcgtcgccacttctcgctcgtcgaaccataaggagtctagctccgacgatcaatttcagccgttgattaccgctagaacacctccgcagtcagatttgatagcgattactcaatcggagcttcattcagtccaaagtgaagtgaaggtgtttgaggccgtgcctgtaccggtggacgaaccgcaggtgtttgaggttaagccagtactggtgaacggctccgtcgtggttatgaatcatgaagatgaagacgtgatcgatgagcctgatgcaagcgaagcgatagtgatttcgaaatctgttgtctctccgttgccggaaattgaatctaaaaatgagttgcttctaataccggcgacggagaaacctctggtttcttccaggttcggtaaccgaaaacctgctgtgaaaatgagtccggaaggggtgaagtcactgaaagtgtcgcggtcgaaaaagccagagacattagagaacacatggaaaatgataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="47560" stop="49004"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47868" g_stop="48490" g_length="623"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="670" r_length="623" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="48491" i_stop="48643" i_length="153">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="48644" g_stop="48688" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="671" r_stop="715" r_length="45" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E485600" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="0.904" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E485600" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47868" e_stop="48490"/>
          <exon e_start="48644" e_stop="48688"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTATCGGAGAAAATGGCGAACAGTTTAATTCTATCCATTAAGGTTGTGCTAATATCAATTGGTGCAATTTCCTTAGCGATGGTAGCGAAAGCGTCGATTCCATTAATTTATCATGAGCTACCAGCAATTTGGAGTGTACTTATAGCTTGGCTTAAGCCTCCGTATCTCTACTTTGTTATCAATGCTATAATCCTCATAATTTTCGCCACTTCTCGCTCGTCCAACCATAAGGAGTACTCCAGCTCCGACGAACAATTACAACCGCTGATTACCGCTAGAACACCTCCGCAGTCAGATTTGATAGCGATTACTCAATCGGAGCTTCATTCAGTCCAAAGTGAAGTGAAGGTGTTTGAGGTGAAGCCTGTAGTGGTGGATGAACCGCAGGTGTTTGAGGTTAAGCCAGTACTGGTGAACGGCTCCGTCGTGGTTATGAATCATGAAGATGAAGA--TCA-CGATGATCCCGATGAAAGCGAAGCGATCGTGATTCCGAAATCAGTTGTTTCTCCGTTGCCGGAAATTGAATCTAAAAATGAGCTGCTTCTAATACCGGCGACGGAGAAACCTCTGGTTTCTTCCAGATTCGGTAACAGAAAACCTGCTGTGAAAATGAGTCCGGAAGGTACGTGAAAAGTATACACATTGTTACTACTTTCTTCGTCTCAATTTATGTTTGCACATTTAAAATTCAGTTCGAAACGGAGGCATCCATCACGCATTTTTCATCTTATTTCAATCGGTATAAGTTTTAAAACTAGATATTTTACAATTTCAGGGGTGAAGTCACTGAAAGTGTCCCGGTCGAAAAAGCCAGAGACAT</genome_strand>
        <mrna_strand>GTTATCGAAGAAAATGGCGAACAGTTTAATTCTATCGATTAAGGTTGTGCTAATATCAATTGGTGCAATTTCCTTAGCGATGGTAGCAAAAGCGTCGATTCCATTAATTTATTATGAGCTCCCAGCAATTTGGAGTGTAGTTATAGCTTGGCTTAAGCCTCCGTATCTCTACTTTGTTATCAATGGTATAATCCTCATCATCGTCGCCACTTCTCGCTCGTCGAACCATAAGGAGT-CT--AGCTCCGACGATCAATTTCAGCCGTTGATTACCGCTAGAACACCTCCGCAGTCAGATTTGATAGCGATTACTCAATCGGAGCTTCATTCAGTCCAAAGTGAAGTGAAGGTGTTTGAGGCCGTGCCTGTACCGGTGGACGAACCGCAGGTGTTTGAGGTTAAGCCAGTACTGGTGAACGGCTCCGTCGTGGTTATGAATCATGAAGATGAAGACGTGATCGATGAGCCTGATGCAAGCGAAGCGATAGTGATTTCGAAATCTGTTGTCTCTCCGTTGCCGGAAATTGAATCTAAAAATGAGTTGCTTCTAATACCGGCGACGGAGAAACCTCTGGTTTCTTCCAGGTTCGGTAACCGAAAACCTGCTGTGAAAATGAGTCCGGAAG.........................................................................................................................................................GGGTGAAGTCACTGAAAGTGTCGCGGTCGAAAAAGCCAGAGACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E427227" ref_strand="+" ref_description="SGN-E427227 [STM-48-C7]">
      <seq>cttcacctgcttcttcactcaccggaaaagcaaaaaattaagatagggttatcgaagaaaatggcgaacagtttaattctatcgattaaggttgtgctaatatcaattggtgcaatttccttagcgatggtagcaaaagcgtcgattccattaatttattatgagctcccagcaatttggagtgtagttatagcttggcttaagcctccgtatctctactttgttatcaatggtataatcctcatcatcgtcgccacttctcgctcgtcgaaccataaggagtctagctccgacgatcaatttcagccgttgattaccgctagaacacctccgcagtcagatttgatagcgattactcaatcggagcttcattcagtccaaagtgaagtgaaggtgtttgaggccgtgcctgtaccggtggacgaaccgcaggtgtttgaggttaagccagtactggtgaacggctccgtcgtggttatgaatcatgaagatgaagacgtgatcgatgagcctgatgcaagcgaagcgatagtgattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="47560" stop="48630"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47868" g_stop="48358" g_length="491"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="538" r_length="491" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E427227" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>491</cumulative_length_of_scored_exons>
        <coverage percentage="0.913" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E427227" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47868" e_stop="48358"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTATCGGAGAAAATGGCGAACAGTTTAATTCTATCCATTAAGGTTGTGCTAATATCAATTGGTGCAATTTCCTTAGCGATGGTAGCGAAAGCGTCGATTCCATTAATTTATCATGAGCTACCAGCAATTTGGAGTGTACTTATAGCTTGGCTTAAGCCTCCGTATCTCTACTTTGTTATCAATGCTATAATCCTCATAATTTTCGCCACTTCTCGCTCGTCCAACCATAAGGAGTACTCCAGCTCCGACGAACAATTACAACCGCTGATTACCGCTAGAACACCTCCGCAGTCAGATTTGATAGCGATTACTCAATCGGAGCTTCATTCAGTCCAAAGTGAAGTGAAGGTGTTTGAGGTGAAGCCTGTAGTGGTGGATGAACCGCAGGTGTTTGAGGTTAAGCCAGTACTGGTGAACGGCTCCGTCGTGGTTATGAATCATGAAGATGAAGA--TCA-CGATGATCCCGATGAAAGCGAAGCGATCGTGATTC</genome_strand>
        <mrna_strand>GTTATCGAAGAAAATGGCGAACAGTTTAATTCTATCGATTAAGGTTGTGCTAATATCAATTGGTGCAATTTCCTTAGCGATGGTAGCAAAAGCGTCGATTCCATTAATTTATTATGAGCTCCCAGCAATTTGGAGTGTAGTTATAGCTTGGCTTAAGCCTCCGTATCTCTACTTTGTTATCAATGGTATAATCCTCATCATCGTCGCCACTTCTCGCTCGTCGAACCATAAGGAGT-CT--AGCTCCGACGATCAATTTCAGCCGTTGATTACCGCTAGAACACCTCCGCAGTCAGATTTGATAGCGATTACTCAATCGGAGCTTCATTCAGTCCAAAGTGAAGTGAAGGTGTTTGAGGCCGTGCCTGTACCGGTGGACGAACCGCAGGTGTTTGAGGTTAAGCCAGTACTGGTGAACGGCTCCGTCGTGGTTATGAATCATGAAGATGAAGACGTGATCGATGAGCCTGATGCAAGCGAAGCGATAGTGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E555621" ref_strand="+" ref_description="SGN-E555621 [cTSC-6-F6]">
      <seq>gtgcattcaagccctcagcatgaagagctgaacattgaaggttctgttgatcccaattaccttaatgagaagaaatcttctgttgaggatcccaattaccttgatgagaagaaatcttcagttgatgacacaaattaccttagtgagaagatatcttctgttgatgaccccagctaccttaatgagaaggaatcttctgttgatgatcccaacatcctgaatgagaagaaatcttctgttgatgatcctaactgcctgaatgagaagaaatctgctgttgatgatcccaactacgtggatgagaggaaatcttctgttgatgatcccaattgccttaaggagaagaaatcttctgcttcaccatttaaaggtgaatttgacctgaatgctaagccagatagggacgacgagctttcaccaggctctgattctggtagcatgatgcgcatgatcaaacgtgctgctgagcaatatgtcaggcactgtgataatggaagttccgtgggtaaccaaagagatggagatggtgctggggagacaaatccgggtaattgtgttattgttagtggtagtcatcaagctgatgtagatcataataggcctttacccataagcgctgctgcatctttggcacctaatgaccagtaagttgctccctacatgaggcacctaaattagctgtgctatattaaaaaccagaggtactccgcagtgtatggaaatttgtacattttggctttgctggcgtcatgcattgtacatagatagacgtagcaagtagcaactgatgtaatctttctgcaatccacaggttgcattttgcaatgggcgcgaggtggcttacatatttattatataaatggctggaaaggttttggagtttaaaaaaaaaaaaaaaaaaanaaaaannaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="51802" stop="50318"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51502" g_stop="50632" g_length="871"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="871" r_length="871" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="884" polyA_stop="908"/>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E555621" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>871</cumulative_length_of_scored_exons>
        <coverage percentage="0.936" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E555621" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51502" e_stop="50632"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATGAGAAGAAATCTTCAGTTGATGACACAAATTACCTTAGTGAGAAGATATCTTCTGTTGATGACCCCAGCTACCTTAATGAGAAGGAATCTTCTGTTGATGATCCCAACATCCTGAATGAGAAGAAATCTTCTGTTGATGATCCTAACTGCCTGAATGAGAAGAAATCTGCTGTTGATGATCCCAACTACGTGGATGAGAGGAAATCTTCTGTTGATGATCCCAATTGCCTTAAGGAGAAGAAATCTTCTGCTTCACCATTTAAAGGTGAATTTGACCTGAATGCTAAGCCAGATAGGGACGACGAGCTTTCACCAGGCTCTGATTCTGGTAGCATGATGCGCATGATCAAACGTGCTGCTGAGCAATATGTCAGGCACTGTGATAATGGAAGTTCCGTGGGTAACCAAAGAGATGGAGATGGTGCTGGGGAGACAAATCCGGGTAATTGTGTTATTGTTAGTGGTAGTCATCAAGCTGATGTAGATCATAATAGGCCTTTACCCATAAGCGCTGCTGCATCTTTGGCACCTAATGACCAGTAAGTTGCTCCCTACATGAGGCACCTAAATTAGCTGTGCTATATTAAAAACCAGAGGTACTCCGCAGTGTATGGAAATTTGTACATTTTGGCTTTGCTGGCGTCATGCATTGTACATAGATAGACGTAGCAAGTAGCAACTGATGTAATCTTTCTGCAATCCACAGGTTGCATTTTGCAATGGCCGCGAGGTGCCTTACATATTTATTATATAAATGGCTGGAAAG</genome_strand>
        <mrna_strand>GTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATGAGAAGAAATCTTCAGTTGATGACACAAATTACCTTAGTGAGAAGATATCTTCTGTTGATGACCCCAGCTACCTTAATGAGAAGGAATCTTCTGTTGATGATCCCAACATCCTGAATGAGAAGAAATCTTCTGTTGATGATCCTAACTGCCTGAATGAGAAGAAATCTGCTGTTGATGATCCCAACTACGTGGATGAGAGGAAATCTTCTGTTGATGATCCCAATTGCCTTAAGGAGAAGAAATCTTCTGCTTCACCATTTAAAGGTGAATTTGACCTGAATGCTAAGCCAGATAGGGACGACGAGCTTTCACCAGGCTCTGATTCTGGTAGCATGATGCGCATGATCAAACGTGCTGCTGAGCAATATGTCAGGCACTGTGATAATGGAAGTTCCGTGGGTAACCAAAGAGATGGAGATGGTGCTGGGGAGACAAATCCGGGTAATTGTGTTATTGTTAGTGGTAGTCATCAAGCTGATGTAGATCATAATAGGCCTTTACCCATAAGCGCTGCTGCATCTTTGGCACCTAATGACCAGTAAGTTGCTCCCTACATGAGGCACCTAAATTAGCTGTGCTATATTAAAAACCAGAGGTACTCCGCAGTGTATGGAAATTTGTACATTTTGGCTTTGCTGGCGTCATGCATTGTACATAGATAGACGTAGCAAGTAGCAACTGATGTAATCTTTCTGCAATCCACAGGTTGCATTTTGCAATGGGCGCGAGGTGGCTTACATATTTATTATATAAATGGCTGGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E553095" ref_strand="+" ref_description="SGN-E553095 [cTSB-1-B12]">
      <seq>gtgcattcaagccctcagcatgaagagctgaacattgaaggttctgttgatcccaattaccttaatgagaagaaatcttctgttgaggatcccaattaccttgatgagaagaaatcttcagttgatgacacaaattaccttagtgagaagatatcttctgttgatgaccccagctaccttaatgagaaggaatcttctgttgatgatcccaacatcctgaatgagaagaaatcttctgttgatgatcctaactgcctgaatgagaagaaatctgctgttgatgatcccaactacgtggatgagaggaaatcttctgttgatgatcccaattgccttaaggagaagaaatcttctgcttcaccatttaaaggtgaatttgacctgaatgctaagccagatagggacgacgagctttcaccaggctctgattctggtagcatgatgcgcatgatcaaacgtgctgctgagcaatatgtcaggcactgtgataatggaagttccgtgggtaaccaaagagatggagatggtgctggggagacaaatccgggtaattgtgttattgttagtggtagtcatcaagctgatgtagatcataataggcctttacccataagcgctgctgcatctttggcacctaatgaccagtaagttgctccctacatgaggcacctaaattagctgtgctatattaaaaaccagaggtactccgcagtgtatggaaatttgtacattttggctttgctggcgtcatgcattgtacatagatagacgtagcaagtagcaactgatgtaatctttctgcaatccacaggttgcatttttgcatggccgcgaggtgccttacatatttattatataaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="51802" stop="50342"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51502" g_stop="50642" g_length="861"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="861" r_length="861" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E553095" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>861</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E553095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51502" e_stop="50642"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATGAGAAGAAATCTTCAGTTGATGACACAAATTACCTTAGTGAGAAGATATCTTCTGTTGATGACCCCAGCTACCTTAATGAGAAGGAATCTTCTGTTGATGATCCCAACATCCTGAATGAGAAGAAATCTTCTGTTGATGATCCTAACTGCCTGAATGAGAAGAAATCTGCTGTTGATGATCCCAACTACGTGGATGAGAGGAAATCTTCTGTTGATGATCCCAATTGCCTTAAGGAGAAGAAATCTTCTGCTTCACCATTTAAAGGTGAATTTGACCTGAATGCTAAGCCAGATAGGGACGACGAGCTTTCACCAGGCTCTGATTCTGGTAGCATGATGCGCATGATCAAACGTGCTGCTGAGCAATATGTCAGGCACTGTGATAATGGAAGTTCCGTGGGTAACCAAAGAGATGGAGATGGTGCTGGGGAGACAAATCCGGGTAATTGTGTTATTGTTAGTGGTAGTCATCAAGCTGATGTAGATCATAATAGGCCTTTACCCATAAGCGCTGCTGCATCTTTGGCACCTAATGACCAGTAAGTTGCTCCCTACATGAGGCACCTAAATTAGCTGTGCTATATTAAAAACCAGAGGTACTCCGCAGTGTATGGAAATTTGTACATTTTGGCTTTGCTGGCGTCATGCATTGTACATAGATAGACGTAGCAAGTAGCAACTGATGTAATCTTTCTGCAATCCACAGGTTGCATTTTGCAATGGCCGCGAGGTGCCTTACATATTTATTATATAAAT</genome_strand>
        <mrna_strand>GTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATGAGAAGAAATCTTCAGTTGATGACACAAATTACCTTAGTGAGAAGATATCTTCTGTTGATGACCCCAGCTACCTTAATGAGAAGGAATCTTCTGTTGATGATCCCAACATCCTGAATGAGAAGAAATCTTCTGTTGATGATCCTAACTGCCTGAATGAGAAGAAATCTGCTGTTGATGATCCCAACTACGTGGATGAGAGGAAATCTTCTGTTGATGATCCCAATTGCCTTAAGGAGAAGAAATCTTCTGCTTCACCATTTAAAGGTGAATTTGACCTGAATGCTAAGCCAGATAGGGACGACGAGCTTTCACCAGGCTCTGATTCTGGTAGCATGATGCGCATGATCAAACGTGCTGCTGAGCAATATGTCAGGCACTGTGATAATGGAAGTTCCGTGGGTAACCAAAGAGATGGAGATGGTGCTGGGGAGACAAATCCGGGTAATTGTGTTATTGTTAGTGGTAGTCATCAAGCTGATGTAGATCATAATAGGCCTTTACCCATAAGCGCTGCTGCATCTTTGGCACCTAATGACCAGTAAGTTGCTCCCTACATGAGGCACCTAAATTAGCTGTGCTATATTAAAAACCAGAGGTACTCCGCAGTGTATGGAAATTTGTACATTTTGGCTTTGCTGGCGTCATGCATTGTACATAGATAGACGTAGCAAGTAGCAACTGATGTAATCTTTCTGCAATCCACAGGTTGCATTTTTGCATGGCCGCGAGGTGCCTTACATATTTATTATATAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E698551" ref_strand="+" ref_description="SGN-E698551 [FA06DA03]">
      <seq>cccccttaaaagagggagagacccttccagcatcaccacaggccccaactaagcatccacgtcatagacctgggtgtacatgcattgtctgcatccagccccctagtggaaaaggtcctaagcacaagcaatcatgtgattgtaacgtctgtaaatcagtaaagcgtcgtttcaaaacattgatgatgaagcgtgaaaaaaagttatcagagaaagaagcagaagctacttgtcaaaagctgcagccgcaatcagctgggcaattgcttgatgctgatgacattcaagaacctattgatgatgcagtgcattcaagccctcagcatgaagagctgaacattgaaggttctgttgatcccaattaccttaatgagaagaaatcttctgttgaggatcccaattaccttgatgagaagaaatcttcagttgatgacacaaattaccttagtgagaagatatcttctgttgatgaccccagctaccttaatgagaaggaatcttctgttgatgatcccaacatcctgaatgagaagaaatcttctgttgatgatcctaactgcctgaatgagaagaaatctgctgttgatgatcccaactacgtggatgagaggaaatcttctgttgatgatcccaattgccttaaggagaagaaatcttctgcttcaccatttaaaggtgaatttgacctgaatgctaagccagatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="52103" stop="50802"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51807" g_stop="51102" g_length="706"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="706" r_length="706" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E698551" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51807" e_stop="51102"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATCCTAGAAGAGGGAGAGACCCTTCCAGCATCACCACAGGCCACAACTAAGCATCCACGTCATAGACCTGGGTGTACATGCATTGTCTGCATCCAGCCCCCTAGTGGAAAAGGTCCTAAGCACAAGCAATCATGTGATTGTAACGTCTGTAAATCAGTAAAGCGTCGTTTCAAAACATTGATGATGAAGCGTGAAAAAAAGTTATCAGAGAAAGAAGCAGAAGCTACTTGTCAAAAGCTGCAGCCGCAATCAGCTGGGCAATTGCTTGATGCTGATGACATTCAAGAACCTATTGATGATGCAGTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATGAGAAGAAATCTTCAGTTGATGACACAAATTACCTTAGTGAGAAGATATCTTCTGTTGATGACCCCAGCTACCTTAATGAGAAGGAATCTTCTGTTGATGATCCCAACATCCTGAATGAGAAGAAATCTTCTGTTGATGATCCTAACTGCCTGAATGAGAAGAAATCTGCTGTTGATGATCCCAACTACGTGGATGAGAGGAAATCTTCTGTTGATGATCCCAATTGCCTTAAGGAGAAGAAATCTTCTGCTTCACCATTTAAAGGTGAATTTGACCTGAATGCTAAGCCAGATAG</genome_strand>
        <mrna_strand>CCCCCTTAAAAGAGGGAGAGACCCTTCCAGCATCACCACAGGCCCCAACTAAGCATCCACGTCATAGACCTGGGTGTACATGCATTGTCTGCATCCAGCCCCCTAGTGGAAAAGGTCCTAAGCACAAGCAATCATGTGATTGTAACGTCTGTAAATCAGTAAAGCGTCGTTTCAAAACATTGATGATGAAGCGTGAAAAAAAGTTATCAGAGAAAGAAGCAGAAGCTACTTGTCAAAAGCTGCAGCCGCAATCAGCTGGGCAATTGCTTGATGCTGATGACATTCAAGAACCTATTGATGATGCAGTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATGAGAAGAAATCTTCAGTTGATGACACAAATTACCTTAGTGAGAAGATATCTTCTGTTGATGACCCCAGCTACCTTAATGAGAAGGAATCTTCTGTTGATGATCCCAACATCCTGAATGAGAAGAAATCTTCTGTTGATGATCCTAACTGCCTGAATGAGAAGAAATCTGCTGTTGATGATCCCAACTACGTGGATGAGAGGAAATCTTCTGTTGATGATCCCAATTGCCTTAAGGAGAAGAAATCTTCTGCTTCACCATTTAAAGGTGAATTTGACCTGAATGCTAAGCCAGATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E314839" ref_strand="+" ref_description="SGN-E314839 [cTOA-20-H16]">
      <seq>gaaaagttcctgacaatgttgaccttccatcgagatggacttgttcagacaactcatgcgaccccgagaggtctgtgtgctcagcagttcaagaattaacagcagatcatctgagggacctactacctcatattaataaagcttccaagaaaaggaaggcttctaaacaggaaatggacttggttgaaactctggatgggcttgatgcccttgctcatctagctatcctagaagagggagagacccttccagcatcaccacaggccacaactaagcatccacgtcatagacctgggtgtacatgcattgtctgcatccagccccctagtggaaaaggtcctaagcacaagcaatcatgtgattgtaacgtctgtaaatcagtaaagcgtcgtttcaaaacattgatgatgaagcgtgaaaaaaagttatcagagaaagaagcagaagctacttgtcaaaagctgcagccgcaatcagctgggcaattgcttgatgctgatgacattcaagaacctattgatgatgcagtgcattcaagccctcagcatgaagagctgaacattgaaggttctgttgatcccaattaccttaatgagaagaaatcttctgttgaggatcccaattaccttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="53324" stop="51097"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53024" g_stop="52955" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52954" i_stop="52087" i_length="868">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52086" g_stop="52016" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="141" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52015" i_stop="51889" i_length="127">
            <donor d_prob="0.918" d_score="1.00"/>
            <acceptor a_prob="0.942" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="51888" g_stop="51397" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="633" r_length="492" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E314839" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314839" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53024" e_stop="52955"/>
          <exon e_start="52086" e_stop="52016"/>
          <exon e_start="51888" e_stop="51397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGTTCCTGACAATGTTGACCTTCCATCGAGATGGACTTGTTCAGACAACTCATGCGACCCCGAGAGGTATGATGGAAATTCTTTAACCTACCTAAGATGCAGTTAAAATGTCAATAGAATACATGAAGGAAAGCGCACATGCTTTTGTTAGTGTAAATGCTGAAGTGGATTGCATTAAGCAATCTGGACAAGCCAAAACCTCTAACTTCAATAATCAAGCTTGTCAGTGGAAGAAAAGGTTGTACTGGTGAATTACTCCTCATGAAATGTGCTTCATAGGTAGGAGTAAGGTCTGCAACATTCTACTCTCCCCAGTCCTACTTGTGGGATTACACCGGAGATGTGGTTGTTGTTGTTGAAATGTGCTTCTGATATTAGATATTGAAAATCATTTTAAAAATTGTCCTGCAGACACAAATTTATCCTTTTTCTTTCCAAAGTCTAACTGAACCTTGCTATTTGGAATTGGCAACCTGATGAGGTTTTCTATGGTTGGTTTCTCCCCTTTTCTTTTAGCAGTTTGTCCCTTTAATCAACTCTGTAGCATTCTTCTTCTCTCTCCAATTTTCTATTCTTTCAGAAAGTTAACTTTGAACCACCTTCATCACCTGTGCCTGCATTATATGAGTTTCCATCATTAGAAAAAAAAAAACTTCGTCAGTTTCCATTTTCTACGATTCTCGTTTTCTTTAAGTTACATCTGGCTGTCTTTTGCTTTAATAGAAATAAACTAACGTCTGTTCATTTCCATCCTGATAAAAAAAAAAGTTTGTCTCCAAAATAGTATTGACAATTCCTGAATGATCTTTATCATAGATAGAAATACACAAAGTTATCAATCTTTTTTTAAAAAAAAGTATTGACAATTCCTGAAATTCAGTCAAGTATTCAATTGCAGTTTGAGTATTTGGGTTATGATCTTTCTTCTTTTTAGGTCTGTGTGCTCAGCAGTTCAAGAATTAACAGCAGATCATCTGAGGGACCTACTACCTCATATTAATAAAGGTAAAAGTGCTTGCTCGTGTAGGTCATAAATTTCTACACTATTGAACCGGTGCTTATGTGTCTGCCTCATCTTGACAATGAATTGCAAGTCCTTCAGGTTTACTGAAGTTATATGATTCTTTTGCAGCTTCCAAGAAAAGGAAGGCTTCTAAACAGGAAATGGACTTGGTTGAAACTCTGGATGGGCTTGATGCCCTTGCTCATCTAGCTATCCTAGAAGAGGGAGAGACCCTTCCAGCATCACCACAGGCCACAACTAAGCATCCACGTCATAGACCTGGGTGTACATGCATTGTCTGCATCCAGCCCCCTAGTGGAAAAGGTCCTAAGCACAAGCAATCATGTGATTGTAACGTCTGTAAATCAGTAAAGCGTCGTTTCAAAACATTGATGATGAAGCGTGAAAAAAAGTTATCAGAGAAAGAAGCAGAAGCTACTTGTCAAAAGCTGCAGCCGCAATCAGCTGGGCAATTGCTTGATGCTGATGACATTCAAGAACCTATTGATGATGCAGTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATG</genome_strand>
        <mrna_strand>GAAAAGTTCCTGACAATGTTGACCTTCCATCGAGATGGACTTGTTCAGACAACTCATGCGACCCCGAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTGTGCTCAGCAGTTCAAGAATTAACAGCAGATCATCTGAGGGACCTACTACCTCATATTAATAAAG...............................................................................................................................CTTCCAAGAAAAGGAAGGCTTCTAAACAGGAAATGGACTTGGTTGAAACTCTGGATGGGCTTGATGCCCTTGCTCATCTAGCTATCCTAGAAGAGGGAGAGACCCTTCCAGCATCACCACAGGCCACAACTAAGCATCCACGTCATAGACCTGGGTGTACATGCATTGTCTGCATCCAGCCCCCTAGTGGAAAAGGTCCTAAGCACAAGCAATCATGTGATTGTAACGTCTGTAAATCAGTAAAGCGTCGTTTCAAAACATTGATGATGAAGCGTGAAAAAAAGTTATCAGAGAAAGAAGCAGAAGCTACTTGTCAAAAGCTGCAGCCGCAATCAGCTGGGCAATTGCTTGATGCTGATGACATTCAAGAACCTATTGATGATGCAGTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E344187" ref_strand="+" ref_description="SGN-E344187 [cTOF-16-H9]">
      <seq>tatggaggaagccgatctgcacccaaagtatttagtgacgatgtaaagcccctgctagaggatgcaaatattcactatacactgcaagaaactaaatatcggttacatgcaaaggaagttgctcattcgttggatcttttgcgatatgatggagttctttgtgtcagtggtgatggaattttggttgaggtagtgaatggactgcttgaaagggaggattggagtactgcaataaagatgcctcttggagtaatacccgcaggaacttcaaatgggatggccaagtctcttctagattctgttggtgaatcttgtactgcatttaatgcaactcttgctataatcagaggccacaagagatcactagatgtagctacagttttacaggggcagaaaaaatatttcagtgtgctgatgcttgcctggggtcttatagctgatatagatatagagtctgagaagtataggtggatgggtagtgctcgaatggatttttatgcaatacagcggatattttgtcttagaaagtatcatggctgtatcaaatttgtggctgcaccagggtttgaaaattttggagaaccaaatgaacttggaggtgaaattgatgagcttaactcgaaatttgttatgcaagatggctattgtggtcccacttttgacatgaaggttttcaaccgcaagaattgagggccttttgtctcaatctggcttcataatgtaccttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="70882" stop="67403"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70582" g_stop="70495" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70494" i_stop="70399" i_length="96">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.707" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70398" g_stop="70298" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="189" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70297" i_stop="69437" i_length="861">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="69436" g_stop="69364" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="262" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="69363" i_stop="68938" i_length="426">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="68937" g_stop="68851" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="263" r_stop="349" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="68850" i_stop="68738" i_length="113">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="68737" g_stop="68660" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="427" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="68659" i_stop="68530" i_length="130">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="68529" g_stop="68459" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="498" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="68458" i_stop="67935" i_length="524">
            <donor d_prob="0.810" d_score="1.00"/>
            <acceptor a_prob="0.849" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="67934" g_stop="67703" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="499" r_stop="730" r_length="232" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E344187" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344187" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70582" e_stop="70495"/>
          <exon e_start="70398" e_stop="70298"/>
          <exon e_start="69436" e_stop="69364"/>
          <exon e_start="68937" e_stop="68851"/>
          <exon e_start="68737" e_stop="68660"/>
          <exon e_start="68529" e_stop="68459"/>
          <exon e_start="67934" e_stop="67703"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGGAGGAAGCCGATCTGCACCCAAAGTATTTAGTGACGATGTAAAGCCCCTGCTAGAGGATGCAAATATTCACTATACACTGCAAGGTTTGCAATATTAAATATCTTATTCATGTGTAACAGTTGGTTTTTCAGTGATTCTTTTTGTGTCATTAATCTTGCCTTTTAATCTTCCCCTCTCAGAAACTAAATATCGGTTACATGCAAAGGAAGTTGCTCATTCGTTGGATCTTTTGCGATATGATGGAGTTCTTTGTGTCAGTGGTGATGGAATTTTGGTTGAGGTAAGTTGGCATGTCTATTCTTGTTTTTGATATCTTCTGTATGACCTATTGTTGTTTGCCTTTCACTTGAACAATTACGCTATAACAACTACTTTTTGTCATATATTTGATCATGGAATACCTAACTTAATTGTTGACTGGCATGTTATGCTTTCCTGATGAAAAACTCAAGATATTTCAGTTTATATATTGTTCTGATTTAAAGATATCAAAGATGAACCTACAGTGGGATAACTGCTATATAAAACTTATTCCTTCACCAGCGGTTTTTCCTGACTTTTACCCAGCTTCACTTCAAACATGAAACTGCTGAAAGGAGTTGCTGAATGCGAAGGAATAAATTTGTAGTATCATGGTTAAATGAAAAACAATTGAAAGATAAACTGATTGTGTTTATTCCAAAACTTTAGAGGGCTTATATGTAGGTATCTTATTCTCGTGCTTCAACTTCTGAAATGCATACAAAAAGAGAAGCACAGAGGCTTATCCCCCCCCTCCCCCCCCCCCCCCCCCACAAGGAAAAAAACAGAGTAAGTATATTGCACTGATGTAGTTGAGAACTTGACATTTCTTAGAGGTCAGTCCTGGAACAACTTCAAAGTTGCTCCAGTGATATTGATGGTAGCCACAACATGGGTACAAAATCTCTGTTCTTCACTAATCCTGTATTCTAGAAGGTCTGTTCCCTGAGGGATCTATCTTTAAGATTTTTGGCTTATTATTTATTGTCGTAAATGGATGATAATCAGAGGGTCCGACTCCTCTTGCGCACTTGTGATAAAAGTTTCCTGATCAATAAGAGAAATGGATGATAACCAACCAGTGATCCTCTTACTTTCATGTTTTTACAATTTTTAGTAGGTAGTGAATGGACTGCTTGAAAGGGAGGATTGGAGTACTGCAATAAAGATGCCTCTTGGAGTAATACCCGCAGGTATATTTTCTTCTCTTGCTGGTGCTTGCCTTTAGTAAACACTAAGCGGGTCTGTATATTTTGCTTAGCTTTTATTGTGGAGCTTGATATACATTATTTTGGTTTTGTCACATTAAGCTTTTAATCACATTGTTATACCTATATAGTATGTTAAACCACCAGATAAGCACTTCCATCTAATTTCTAAAAGGTGGTCAAGGGAACGAGGTGGTGAAACACATGTAACTTGACACAACTTTCAGAAATTAGACTGAAATGCTGATCTGGTTTCTTATATACATTATACATAGTTTGATCTGTAACTTCTTATACAGTATAATGTACATATTTTGGTTTGTAACTTCTTACAAACATTTTTGCACATGGAAGCTATTATTTACTTTCTTCTACTGTTCTATAATTGCATTTTTGTGTATGCTAATGCAGGAACTTCAAATGGGATGGCCAAGTCTCTTCTAGATTCTGTTGGTGAATCTTGTACTGCATTTAATGCAACTCTTGCTATAATCAGAGGTAAATATCCTTTTAACAAAAATGTGTATTCCTGAACTGGAGTTTTAATTGAATTACTATTCTTGTTGAATGAAAGAAGACTTTTATATCTATGCATGTTTGGTCTATGGCAGGCCACAAGAGATCACTAGATGTAGCTACAGTTTTACAGGGGCAGAAAAAATATTTCAGTGTGCTGATGCTTGCCTGGGGTATGTATATCTGACATTGTCTCTGGTGGTTTTGATACCTTTTTTGTTTCATTTAATGCAATGTGATGCACTTATTGTTGCAAATTGAAATATCATACTAAACTATCTGACAGGATTCGTTGTTTTTCAGGTCTTATAGCTGATATAGATATAGAGTCTGAGAAGTATAGGTGGATGGGTAGTGCTCGAATGGATTTTTATGTATGTTCTAAATCTATTTCCTCTAATATATATTTTTCTTAGATTTCAGTATCAGAACTTACACCCTTTGTGTAGTTTGTTATGAATATACAAATATGTTACCTGTTTCAAAAAAACGCTGTACCTCCATATTTCCTCACTGGATTTATTTACAAATTTTCTGCTTGCTGTAGAACTTCATTCCTTGATCTCTCTCTCTCTCTCTCCCTCCTCTCTTTTTGCACCTTGCTCCTTCTCGTTTTTTGGAAGGTTTGGTCTCATTACAATATTCGAGATTCACTGACCCAGAAATTTGCCAGTATTTTGTGTACCTGAACCGTTCTTCATGGACAATAGTTCCACCCCCCTTCCATCCTATCTTTTTCCAGGAGAAAAAAAAAATGAAAGAAAGAAAAAGACAAAGTTGAATGTCTCTTCAGTTGATTGCATGATTCATGGTTCTAAGATACAGAGGGAATCTAATATATGGCTATTGAAGCATCATGGCTTGCTTTTTAATTGCTAGTCTTTTGTTATTGGTCCAGGCAATACAGCGGATATTTTGTCTTAGAAAGTATCATGGCTGTATCAAATTTGTGGCTGCACCAGGGTTTGAAAATTTTGGAGAACCAAATGAACTTGGAGGTGAAATTGATGAGCTTAACTCGAATTTGGTTATGCAAGATGGCTATTGTGGTCCCACTTTTGACATGAAGGGTTTCAACCGCAAGATTGAGGGGCCTTTTGTCTCAATCTGGCTTCATAATGTACCTTGGG</genome_strand>
        <mrna_strand>TATGGAGGAAGCCGATCTGCACCCAAAGTATTTAGTGACGATGTAAAGCCCCTGCTAGAGGATGCAAATATTCACTATACACTGCAAG................................................................................................AAACTAAATATCGGTTACATGCAAAGGAAGTTGCTCATTCGTTGGATCTTTTGCGATATGATGGAGTTCTTTGTGTCAGTGGTGATGGAATTTTGGTTGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGTGAATGGACTGCTTGAAAGGGAGGATTGGAGTACTGCAATAAAGATGCCTCTTGGAGTAATACCCGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTCAAATGGGATGGCCAAGTCTCTTCTAGATTCTGTTGGTGAATCTTGTACTGCATTTAATGCAACTCTTGCTATAATCAGAG.................................................................................................................GCCACAAGAGATCACTAGATGTAGCTACAGTTTTACAGGGGCAGAAAAAATATTTCAGTGTGCTGATGCTTGCCTGGG..................................................................................................................................GTCTTATAGCTGATATAGATATAGAGTCTGAGAAGTATAGGTGGATGGGTAGTGCTCGAATGGATTTTTAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATACAGCGGATATTTTGTCTTAGAAAGTATCATGGCTGTATCAAATTTGTGGCTGCACCAGGGTTTGAAAATTTTGGAGAACCAAATGAACTTGGAGGTGAAATTGATGAGCTTAACTCGAAATTTGTTATGCAAGATGGCTATTGTGGTCCCACTTTTGACATGAAGGTTTTCAACCGCAAGAATTGAGGGCCTTTTGTCTCAATCTGGCTTCATAATGTACCTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E436302" ref_strand="+" ref_description="SGN-E436302 [STM-62-F14]">
      <seq>ggaatacaaagataacgacattccttacttatttctcgctatgctactcaaccgggttttccaccttataataaatcgatgcgcctgacggaaaccgagatattaacaatggatccgacggacgccggagctcctcttctatctgaccgggttcaaatcagcggcaatgtagttccgatgactctcactaccggaggaaaactccgatggcctgaccggtgtttgtcaattgcgaaagatgtcctcggcttcaccgtcgaaggttctcggatcaaaatcaatgccgtcattgagagtggacctggaatttgctgccccggtaatgtaggagctccgatgaggaagactttcacttttgagccattatctgaggattctcttcggctttggaatcaacgactccaatcagtcatcgactcactcggtcgtcctaagagactttttgtacttctgaatccatatggaggaagccgatctgcacccaaagtatttagtgacgatgtgaagcccctgctcgatgatgcaaatattcactacacactgcaagaaactaaatatcgattacatgcgaaggaagttgctcattcattggatgttatgggatatgatggagttctttgtgtcagtggtgacggaattttggttgaggtagtgaatggactgcttgaaagagaggattcggagttctgcataaagatgcctcttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="72365" stop="69078"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72065" g_stop="71642" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="424" r_length="424" r_score="0.939"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71641" i_stop="70618" i_length="1024">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.958" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70617" g_stop="70495" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="547" r_length="123" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70494" i_stop="70399" i_length="96">
            <donor d_prob="0.985" d_score="0.92"/>
            <acceptor a_prob="0.707" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70398" g_stop="70298" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="548" r_stop="648" r_length="101" r_score="0.931"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="70297" i_stop="69437" i_length="861">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="69436" g_stop="69378" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="649" r_stop="707" r_length="59" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E436302" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E436302" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72065" e_stop="71642"/>
          <exon e_start="70617" e_stop="70495"/>
          <exon e_start="70398" e_stop="70298"/>
          <exon e_start="69436" e_stop="69378"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATACAAAGATAACGACATTCCTTACTTGTTTCTCGCTACGTTATTGAACCGTTTTTTTCGCCTTATAATAAATCGCTGCGCCTGACGGAAACCGAGGTATAAACAATGGACCCGACGGACGCCGGAGCTCCTCTTCTATCCGACCGGGTTCAAATCAGCGGCAATGTAGTTCCGATGACTCTGACAACTGGAGGAAAACTCCGATGGCTTGACCGGTGTTTGTCAATTGCGAAAGATGTCCTCGGTTTTACCGTCGAAGGTTGTCGGATCAAAATCAATGCCGTCATTGAGAGTGGACCTGGAATTTGCTGCCCCGGTAATGTAGGAGCTTCGATGAGGAAGAATTTCACTTTTGAGCCATTGTCTGAGGATTCTCTTCGGCTTTGGAATCAACGACTCCAATCAGTCATCGATTCGCTCGGTAACTATTTCATTTTGTTTTCGAGGAATGCTGTACTACTATATATGCAAAGATTCTGAACTGTTGAATATGGATTTCACCACCATTTCCTTTTAATAGGAAACATGATGATATTAATTCATGTTTTTTAATTACACCGATTTTTTTATAATGTGTGAATAGTGATTTGATGGAACTATGATGCAAGTCAAACATCTTTTCTACAAGATTTGGGGTACTTAAAAGTCTGGTATGGCAGTCTTCACCGGGGGATAGTAATGTCTAGCGCACAGCCTGAAGCTGTGTTTTTGGGAACAGATAAAATGGAATGAAAAGCATATAGTACTTTATTTATGTTGGAATGTATGACCAGATACTTGCTTCTTGTTTTATTTGTTTTTTGTAATAATTTTTCTTTTGCTTTCCTAAATCATACCATTTTGCGTGTCTGTTAGGTGGTGCGCGTTTATTTGAGGTAATTTTTTGTTAGACTTCCTGATAATATCAAGTTGTAATAATAGCAAGATTTTTTTGGTTTGTTCTTCTTAGGATGTTGTTGTCATCTTCTCTTTCGCAATACGTAGTCATTGTCTTTTTGTTCTGTGATACATTTATCTTGAGAGGGAAGTACACGATACAGATTAAAAGGCACATGTGGCTTTATGTGAGGAAAAAAAAGGATTTTCTGGTAAATGTGAATACAATAATTTAGCATCAGAAATTCAACAAGTTAATCAGTTAGAAAGTTCTTTCTTCTAAAGTAAAGAATTTTGATCTCATTTTGTGTCAAATCTTGATCCGATGTGTGATAGAACATGAATATGACATGTCTTACAAGCATATATTGTGTAACAGAGAAGAAATGTTAAAGCAAATGAGTGCTTCTTGCTTTTTTTTGTCCTTAAGCCTAATTTTTCTTGAGATAAGCTGCTTTGACTTGGAAGTAAGAAGCACTTTTGATATATGGTATGCTTTGCTTCATTTCTTGCTTAAAATGATGTTGTGCTTTTAACCACATGGGATACTTGACATCATGGAATTTTAGGTCGTCCTAAGAGACTTCTTGTACTTCTGAATCCATATGGAGGAAGCCGATCTGCACCCAAAGTATTTAGTGACGATGTAAAGCCCCTGCTAGAGGATGCAAATATTCACTATACACTGCAAGGTTTGCAATATTAAATATCTTATTCATGTGTAACAGTTGGTTTTTCAGTGATTCTTTTTGTGTCATTAATCTTGCCTTTTAATCTTCCCCTCTCAGAAACTAAATATCGGTTACATGCAAAGGAAGTTGCTCATTCGTTGGATCTTTTGCGATATGATGGAGTTCTTTGTGTCAGTGGTGATGGAATTTTGGTTGAGGTAAGTTGGCATGTCTATTCTTGTTTTTGATATCTTCTGTATGACCTATTGTTGTTTGCCTTTCACTTGAACAATTACGCTATAACAACTACTTTTTGTCATATATTTGATCATGGAATACCTAACTTAATTGTTGACTGGCATGTTATGCTTTCCTGATGAAAAACTCAAGATATTTCAGTTTATATATTGTTCTGATTTAAAGATATCAAAGATGAACCTACAGTGGGATAACTGCTATATAAAACTTATTCCTTCACCAGCGGTTTTTCCTGACTTTTACCCAGCTTCACTTCAAACATGAAACTGCTGAAAGGAGTTGCTGAATGCGAAGGAATAAATTTGTAGTATCATGGTTAAATGAAAAACAATTGAAAGATAAACTGATTGTGTTTATTCCAAAACTTTAGAGGGCTTATATGTAGGTATCTTATTCTCGTGCTTCAACTTCTGAAATGCATACAAAAAGAGAAGCACAGAGGCTTATCCCCCCCCTCCCCCCCCCCCCCCCCCACAAGGAAAAAAACAGAGTAAGTATATTGCACTGATGTAGTTGAGAACTTGACATTTCTTAGAGGTCAGTCCTGGAACAACTTCAAAGTTGCTCCAGTGATATTGATGGTAGCCACAACATGGGTACAAAATCTCTGTTCTTCACTAATCCTGTATTCTAGAAGGTCTGTTCCCTGAGGGATCTATCTTTAAGATTTTTGGCTTATTATTTATTGTCGTAAATGGATGATAATCAGAGGGTCCGACTCCTCTTGCGCACTTGTGATAAAAGTTTCCTGATCAATAAGAGAAATGGATGATAACCAACCAGTGATCCTCTTACTTTCATGTTTTTACAATTTTTAGTAGGTAGTGAATGGACTGCTTGAAAGGGAGGATT-GGAGTACTGCAATAAAGATGCCTCTTGG</genome_strand>
        <mrna_strand>GGAATACAAAGATAACGACATTCCTTACTTATTTCTCGCTATGCTACTCAACCGGGTTTTCCACCTTATAATAAATCGATGCGCCTGACGGAAACCGAGATATTAACAATGGATCCGACGGACGCCGGAGCTCCTCTTCTATCTGACCGGGTTCAAATCAGCGGCAATGTAGTTCCGATGACTCTCACTACCGGAGGAAAACTCCGATGGCCTGACCGGTGTTTGTCAATTGCGAAAGATGTCCTCGGCTTCACCGTCGAAGGTTCTCGGATCAAAATCAATGCCGTCATTGAGAGTGGACCTGGAATTTGCTGCCCCGGTAATGTAGGAGCTCCGATGAGGAAGACTTTCACTTTTGAGCCATTATCTGAGGATTCTCTTCGGCTTTGGAATCAACGACTCCAATCAGTCATCGACTCACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTCCTAAGAGACTTTTTGTACTTCTGAATCCATATGGAGGAAGCCGATCTGCACCCAAAGTATTTAGTGACGATGTGAAGCCCCTGCTCGATGATGCAAATATTCACTACACACTGCAAG................................................................................................AAACTAAATATCGATTACATGCGAAGGAAGTTGCTCATTCATTGGATGTTATGGGATATGATGGAGTTCTTTGTGTCAGTGGTGACGGAATTTTGGTTGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGTGAATGGACTGCTTGAAAGAGAGGATTCGGAGTTCTGC-ATAAAGATGCCTCTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E460589" ref_strand="+" ref_description="SGN-E460589 [cPRO-31-D4]">
      <seq>ggaatacaaagataacgacattccttacttatttctcgctatgctactcaaccgggttttccaccttataataaatcgatgcgcctgacggaaaccgagatattaacaatggatccgacggacgccggagctcctcttctatctgaccgggttcaaatcagcggcaatgtagttccgatgactctcactaccggaggaaaactccgatggcctgaccggtgtttgtcaattgcgaaagatgtcctcggcttcaccgtcgaaggttctcggatcaaaatcaatgccgtcattgagagtggacctggaatttgctgccccggtaatgtaggagctccgatgaggaagactttcacttttgagccattatctgaggattctcttcggctttggaatcaacgactccaatcagtcatcgactcactcggtcgtcctaagagactttttgtacttctgaatccatatggaggaagccgatctgcacccaaagtatttagtgacgatgtgaagcccctgctcgatgatgcaaatattcactacacactggcagaaactaaatatcgattacatgcgaaggaaagtgctcattcattggatngtatgggatatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="72365" stop="70036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72065" g_stop="71642" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="424" r_length="424" r_score="0.939"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71641" i_stop="70618" i_length="1024">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.958" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="70617" g_stop="70495" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="547" r_length="123" r_score="0.943"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="70494" i_stop="70399" i_length="96">
            <donor d_prob="0.985" d_score="0.88"/>
            <acceptor a_prob="0.707" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70398" g_stop="70336" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="548" r_stop="610" r_length="63" r_score="0.857"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E460589" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E460589" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72065" e_stop="71642"/>
          <exon e_start="70617" e_stop="70495"/>
          <exon e_start="70398" e_stop="70336"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATACAAAGATAACGACATTCCTTACTTGTTTCTCGCTACGTTATTGAACCGTTTTTTTCGCCTTATAATAAATCGCTGCGCCTGACGGAAACCGAGGTATAAACAATGGACCCGACGGACGCCGGAGCTCCTCTTCTATCCGACCGGGTTCAAATCAGCGGCAATGTAGTTCCGATGACTCTGACAACTGGAGGAAAACTCCGATGGCTTGACCGGTGTTTGTCAATTGCGAAAGATGTCCTCGGTTTTACCGTCGAAGGTTGTCGGATCAAAATCAATGCCGTCATTGAGAGTGGACCTGGAATTTGCTGCCCCGGTAATGTAGGAGCTTCGATGAGGAAGAATTTCACTTTTGAGCCATTGTCTGAGGATTCTCTTCGGCTTTGGAATCAACGACTCCAATCAGTCATCGATTCGCTCGGTAACTATTTCATTTTGTTTTCGAGGAATGCTGTACTACTATATATGCAAAGATTCTGAACTGTTGAATATGGATTTCACCACCATTTCCTTTTAATAGGAAACATGATGATATTAATTCATGTTTTTTAATTACACCGATTTTTTTATAATGTGTGAATAGTGATTTGATGGAACTATGATGCAAGTCAAACATCTTTTCTACAAGATTTGGGGTACTTAAAAGTCTGGTATGGCAGTCTTCACCGGGGGATAGTAATGTCTAGCGCACAGCCTGAAGCTGTGTTTTTGGGAACAGATAAAATGGAATGAAAAGCATATAGTACTTTATTTATGTTGGAATGTATGACCAGATACTTGCTTCTTGTTTTATTTGTTTTTTGTAATAATTTTTCTTTTGCTTTCCTAAATCATACCATTTTGCGTGTCTGTTAGGTGGTGCGCGTTTATTTGAGGTAATTTTTTGTTAGACTTCCTGATAATATCAAGTTGTAATAATAGCAAGATTTTTTTGGTTTGTTCTTCTTAGGATGTTGTTGTCATCTTCTCTTTCGCAATACGTAGTCATTGTCTTTTTGTTCTGTGATACATTTATCTTGAGAGGGAAGTACACGATACAGATTAAAAGGCACATGTGGCTTTATGTGAGGAAAAAAAAGGATTTTCTGGTAAATGTGAATACAATAATTTAGCATCAGAAATTCAACAAGTTAATCAGTTAGAAAGTTCTTTCTTCTAAAGTAAAGAATTTTGATCTCATTTTGTGTCAAATCTTGATCCGATGTGTGATAGAACATGAATATGACATGTCTTACAAGCATATATTGTGTAACAGAGAAGAAATGTTAAAGCAAATGAGTGCTTCTTGCTTTTTTTTGTCCTTAAGCCTAATTTTTCTTGAGATAAGCTGCTTTGACTTGGAAGTAAGAAGCACTTTTGATATATGGTATGCTTTGCTTCATTTCTTGCTTAAAATGATGTTGTGCTTTTAACCACATGGGATACTTGACATCATGGAATTTTAGGTCGTCCTAAGAGACTTCTTGTACTTCTGAATCCATATGGAGGAAGCCGATCTGCACCCAAAGTATTTAGTGACGATGTAAAGCCCCTGCTAGAGGATGCAAATATTCACTATACACTGCAAGGTTTGCAATATTAAATATCTTATTCATGTGTAACAGTTGGTTTTTCAGTGATTCTTTTTGTGTCATTAATCTTGCCTTTTAATCTTCCCCTCTCAGAAACTAAATATCGGTTACATGCAAAGGAAGTTGCTCATTCGTTGGATCTTTTGCGATATGATG</genome_strand>
        <mrna_strand>GGAATACAAAGATAACGACATTCCTTACTTATTTCTCGCTATGCTACTCAACCGGGTTTTCCACCTTATAATAAATCGATGCGCCTGACGGAAACCGAGATATTAACAATGGATCCGACGGACGCCGGAGCTCCTCTTCTATCTGACCGGGTTCAAATCAGCGGCAATGTAGTTCCGATGACTCTCACTACCGGAGGAAAACTCCGATGGCCTGACCGGTGTTTGTCAATTGCGAAAGATGTCCTCGGCTTCACCGTCGAAGGTTCTCGGATCAAAATCAATGCCGTCATTGAGAGTGGACCTGGAATTTGCTGCCCCGGTAATGTAGGAGCTCCGATGAGGAAGACTTTCACTTTTGAGCCATTATCTGAGGATTCTCTTCGGCTTTGGAATCAACGACTCCAATCAGTCATCGACTCACTCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTCCTAAGAGACTTTTTGTACTTCTGAATCCATATGGAGGAAGCCGATCTGCACCCAAAGTATTTAGTGACGATGTGAAGCCCCTGCTCGATGATGCAAATATTCACTACACACTGGCAG................................................................................................AAACTAAATATCGATTACATGCGAAGGAAAGTGCTCATTCATTGGATNGTATGGGATATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E484095" ref_strand="+" ref_description="SGN-E484095 [cSTE-12-G5]">
      <seq>aaagaggaagccatcaaaatagaaacattcatagaatgatacttccatgaactttcccagaaacatctcttcatcttctttcttctttcaattttttcccgctttccctttttgcgctcttttttctcactttcttgtatccactgagaaaaaaagaagaaagttttgagtctcactatacaaacagttgaataattaaacaaagaaaaagaaaaagaaagaaactttagatcagatctgaaaatttgaagaagaggagtgcttaatagtcaaagaaaatgcagacaaggtatatggaaaaacgtgttttggatccaagtagtagtgaggaaggtcaacctgataggaaaagacctgctcttgcaagtgtcattgttgaagcgctaaaggtggacagtctgcagaaactctgctcatcactggagccaattcttcgaagagttgttagtgaagaagtggagcgtgctttggctaaacttggacctgctaaacttaatgcaagggtttcgccaaaaagaattgaagggcctgatgggagaaatttgcagcttcagtttcggtccaaactgtcactacctctcttccaggaggaaaagtagaaggagagcagggttccgcaatacatattgtcttgattgatggaaatacaaaccatgttgtaacatcaggtcccgagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="75152" stop="79281"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75452" g_stop="75821" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="0.930"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75822" i_stop="76944" i_length="1123">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76945" g_stop="77020" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="443" r_length="76" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77021" i_stop="77865" i_length="845">
            <donor d_prob="0.710" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77866" g_stop="77924" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="502" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="77925" i_stop="78804" i_length="880">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78805" g_stop="78981" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="678" r_length="176" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E484095" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>682</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E484095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75452" e_stop="75821"/>
          <exon e_start="76945" e_stop="77020"/>
          <exon e_start="77866" e_stop="77924"/>
          <exon e_start="78805" e_stop="78981"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGAGGAAGCCATCAAAATAGAAACATTCATAGAATGATAGTTCCATGAACTTTCCGAGAAACATCTCTTCATCTTCTTTCTTCTTTCAATTTTTTTCCCGCTTTCCCCTTTTTTCGCTCCTTTTTCTCACTTTCTTCTATCCACTGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGA-AAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAGGTAATTTGATTTTTAAAAAAATGTTTTTTTTTTAGACTTTTTGTTGAGGGGTATTTTTTCTTTTGGTCTTGTTTTATGTATTATAGCAAATTTTAGTACTGAACAATGCAGTTGGTTTGTTTGAATGATTGGTTATTATGAAAGGTTTTGCTGGGAATATTTGTTGGTTTGAAGAAATTGTAGAGTTTGGGTATTGCAAAAATTATTGTGGAAAGGGGAGAATGGTGATTCTGTTTTGTTGGGGTGGTGGTGAATTAAAATTTTTAGTAAGAAAAATGTGATCTTGATGAATTATGTGTGACGAATGAGGTATTATTATCAAGATCCTTGGAGAGAAGAGAGTGGGAAGCTTTATTGTCTGGTTGTTTGGTGTTGACTGCAAGTGAAGGAAGTTTTTTGATTGAATCTGGCTTGATAACTAGCTTGCTCTTTGTTTTGGTTTATGAGAGAAAAATGAGTATTTTGCTTTGTCATAACTACAAACAATCTACTATTTGATCAGCTGTGGCACTGAAAGAAGAGATTTATAGTGGTTAATTCATGATTCCTTTTTAAGATTTGTGTCATTCGAGGAGGTGATTTGAAGGATTTTGATCATGTTGCAAATAACTTACAATGAATAACATTACATGACTGCCCCTGTCACAGCCCCACAGGACAGAAAGTGGTCCACTAGATCAACTTTTAAATGGGATCTTCACTGTTGGTTGCCAATAAGATTATCCACATTTCATATTCTCAATCATCATTCAGAGGGGAAGTTGTCTCGGTATCCTGCCGGGGACATACTTGAGATTTCTAAGGGAAGTCATTACCAGGTGTTTGTAATCCTGCAAACACTTGTAGCTTTCTCTGAGTGTCTAAGTGATAGATTGATGGTCCACTCTACCCTTTTCTTTTTCTCTTAGCAAGTGATCAGAAAAAAGCTTTTCATTTTAGAGGTTTTTATTTCTGTTGATTGTTTGTTGTGGTATCATCTGACCTGACATCATGTGACCTGGATGTCTTATATTTTCTTAGAGAAGCTGAAATTCAGTGCCCTGTTATAGCTTTACTCATCTTTCTGTGCACTGTTCATGTTAACTGTTGCACACCCTTATTGAAAAGTACATGGTTACTGCAGTGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTTGTAAGATTATTAGGCCCCCTTTAGAACTCTCATCCTATTCATTGGGCATTACTTATGTGAAATTTCATTTAACCAACCAACCACTCCATGGTAACTTGTGAAAGTTTGGTTTTCAATTACATAACTACTGTGGCATGATACATATTTCCAGAAGACTCAGCATGACAGATATTTTACTTCTGAAGGAATACAATGAAATAATCGTAACTGCAAGCTTTGTGACTATACAGGCCAAGAAAAGCCACTGCCAGATATTTGAAATGGATATGTCATTGTTTTGTGTAAAACCATTTATTTCATATGCTGAAATATTTTTTCAAACTATTTGTGCTTTGATCATTGTAGCAGTTACACTGAGAAACCCCTCCCCCCTCCCTCTCTCTCACCAGCGAGAGCTGTCTCCATATCCTGCTTATATGCATAGTTTCTGGAGATAAGTAGCTTTAAATTTTCCTGTCAAGAGCTTACTGAGTGCAGAAATTTACTTCTGTCTTTATTTTTGATGTGAACAACATATTTTAAGCATGTCTGCGCTCCAGGTGACCTTTTAGCAGTTCTTCTCTTGGACTCAAAATGTATTTGAGTTGGTAGTAAAAAGACTTTTGCGTGTTACCATGGCTTTATTCAACTTTTAGCTGTAAGAGCTAAGATATTAATGTCTTATGTACATTTACTTGAAACATTTGGATTCGATGGGCTTGTCACCAGCCCATCGAATGCTAATATTTTATGTGATTGGGATGACTAGACTATGCAAACATGTCCATTCGTGTTTTATTTGTACAAGGTTTCTTCTATAGTGGCTTTTGTTTACTTATTTATGAATGTCCATTTTTGTTTACCAGGTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAGGTATGGTTTCACATATCATCACTCAAACCTTTCAGAGCACAAATCTGATTCCCATATTTTGTCAGGATATTTGCATGTATGGGAAATATCCCATCACTCATCAGAGTCATTTGGTATATCCAATTGTGAACTGGTCAATGTTTAACTGAATTAGAGTGGGATATGAATTGTAGATGTTGGAAACACTTGAGGGGAGGTTTCCCTGGTCTTGTGCAATTATATATTTAGATTTAGGTAAGGTCAATATTTGTTACAGCAGTCAATCCCTATGATTAATGGGAGTGTGGGAGGGTTTGAGCACTTGCTGCAGCCAGAGTCAAAGGTAGATTAGTGAAACTAGTTACAGATGCAGGAAGTCAATTTAGGAAAGAACTAAATCTTAATAATGCTTTTAGAGTTTTGAAAAAGAGTTTTGCTAACATGAACCACAGACTACTAAAACCATTTACATGGACATGGTCCTATGTGTCTATCAGATTGTAATTGACTATTTATTTTGTTTGATATGCTTCTTATTATATAAGTTCCATGGTATTAAACCTTCTCACAGGGAATATCCTTCTGCTTCAGCGGTTTGTATGAGTCATTCTGACTTCTAGTTCATTTCAGTGCTAGAGCAGATTGATTTTCCCAATACTATGTGTGAAATGTGAAAAGACTTTTAGCAAGTCTCCTTCCCATTGGATACTGATCAAAGAATTGACCTAATATGCCAAACATTAGCATGACTATGAAGTGCAGTGTGAGGATGTGACCCCTAATTCAATTTTGCATCAAAGATCAATCTATGCCTATGCTTGCTTGAGCTGTTCATGTACTCCATTTTCTATAATTGAATGTTCACCCTGTTCCGGGATTGAATTTTGTGATAATTATGCAGGGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTC</genome_strand>
        <mrna_strand>AAAGAGGAAGCCATCAAAATAGAAACATTCATAGAATGATACTTCCATGAACTTTCCCAGAAACATCTCTTCATCTTCTTTCTTCTTTCAA-TTTTTTCCCGCTTT-CCCTTTTTGCGCTCTTTTTTCTCACTTTCTTGTATCCACTGAGAAAAAAAGAAGAAAGTTTTGAGTCTCACTATAC-AAACAGTTGAATAATTAAACAAAGAAAAAGAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAAGAAGAGGAGTG-CTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAAAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAGAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCGCCAAAAAGAATTGAAGGGCCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTC-CAGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E560753" ref_strand="+" ref_description="SGN-E560753 [20456]">
      <seq>atgatacttccatgaactttcccagaaaacatctcttcatcttctttcttctttcaattttttcccgctttccctttttgcgctcttttttctcactttcttgtatccactgagaaaaaaagaagaaagttttgagtctcactatacaaacagttgaataattaaacaaagaaaaagaaaaagaaagaaactttagaatcagatctgaaaatttcgaagaagaggagtgcttaatagtcaaagaaaatgcagacaaggtatatggaaaaacgtgttttggatccaagtagtagtgaggaaggtcaacctgataggaaaagacctgctcttgcaagtgtcattgttgaagcgctaaaggtggacagtctgcagaaactttgctcatcactggagccaattcttcgaagagttgttagtgaagaagtggagcgtgctttggctaaacttggacctgctaaacttaatgcaagggtttcgccaaaaagaattgaagggcctgatgggagaaatttgcagcttcagtttcggtccaaactgtcactacctctcttcacaggaggaaaagtagaaggagagcagggttccacaatacatattgtcttgattgatggaaatacaaaccatgttgtaacatcaggtcccggagtccttagttaaactagaattgttgttgtgcttggaaggagatttttaaacaatgaaggatgaatgatggcttggactcaaagaagaattgagtctcata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="75187" stop="79370"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75487" g_stop="75821" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="335" r_length="335" r_score="0.907"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75822" i_stop="76944" i_length="1123">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76945" g_stop="77020" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="411" r_length="76" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77021" i_stop="77865" i_length="845">
            <donor d_prob="0.710" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77866" g_stop="77924" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="470" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="77925" i_stop="78804" i_length="880">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78805" g_stop="79070" g_length="266"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="745" r_length="275" r_score="0.898"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E560753" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E560753" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75487" e_stop="75821"/>
          <exon e_start="76945" e_stop="77020"/>
          <exon e_start="77866" e_stop="77924"/>
          <exon e_start="78805" e_stop="79070"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATAGTTCCATGAACTTTCCGAG-AAACATCTCTTCATCTTCTTTCTTCTTTCAATTTTTTTCCCGCTTTCCCCTTTTTTCGCTCCTTTTTCTCACTTTCTTCTATCCACTGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGA-AAAAAGAAAGAAACTTTAG-ATCAGATCTGAAAATTT-GAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAGGTAATTTGATTTTTAAAAAAATGTTTTTTTTTTAGACTTTTTGTTGAGGGGTATTTTTTCTTTTGGTCTTGTTTTATGTATTATAGCAAATTTTAGTACTGAACAATGCAGTTGGTTTGTTTGAATGATTGGTTATTATGAAAGGTTTTGCTGGGAATATTTGTTGGTTTGAAGAAATTGTAGAGTTTGGGTATTGCAAAAATTATTGTGGAAAGGGGAGAATGGTGATTCTGTTTTGTTGGGGTGGTGGTGAATTAAAATTTTTAGTAAGAAAAATGTGATCTTGATGAATTATGTGTGACGAATGAGGTATTATTATCAAGATCCTTGGAGAGAAGAGAGTGGGAAGCTTTATTGTCTGGTTGTTTGGTGTTGACTGCAAGTGAAGGAAGTTTTTTGATTGAATCTGGCTTGATAACTAGCTTGCTCTTTGTTTTGGTTTATGAGAGAAAAATGAGTATTTTGCTTTGTCATAACTACAAACAATCTACTATTTGATCAGCTGTGGCACTGAAAGAAGAGATTTATAGTGGTTAATTCATGATTCCTTTTTAAGATTTGTGTCATTCGAGGAGGTGATTTGAAGGATTTTGATCATGTTGCAAATAACTTACAATGAATAACATTACATGACTGCCCCTGTCACAGCCCCACAGGACAGAAAGTGGTCCACTAGATCAACTTTTAAATGGGATCTTCACTGTTGGTTGCCAATAAGATTATCCACATTTCATATTCTCAATCATCATTCAGAGGGGAAGTTGTCTCGGTATCCTGCCGGGGACATACTTGAGATTTCTAAGGGAAGTCATTACCAGGTGTTTGTAATCCTGCAAACACTTGTAGCTTTCTCTGAGTGTCTAAGTGATAGATTGATGGTCCACTCTACCCTTTTCTTTTTCTCTTAGCAAGTGATCAGAAAAAAGCTTTTCATTTTAGAGGTTTTTATTTCTGTTGATTGTTTGTTGTGGTATCATCTGACCTGACATCATGTGACCTGGATGTCTTATATTTTCTTAGAGAAGCTGAAATTCAGTGCCCTGTTATAGCTTTACTCATCTTTCTGTGCACTGTTCATGTTAACTGTTGCACACCCTTATTGAAAAGTACATGGTTACTGCAGTGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTTGTAAGATTATTAGGCCCCCTTTAGAACTCTCATCCTATTCATTGGGCATTACTTATGTGAAATTTCATTTAACCAACCAACCACTCCATGGTAACTTGTGAAAGTTTGGTTTTCAATTACATAACTACTGTGGCATGATACATATTTCCAGAAGACTCAGCATGACAGATATTTTACTTCTGAAGGAATACAATGAAATAATCGTAACTGCAAGCTTTGTGACTATACAGGCCAAGAAAAGCCACTGCCAGATATTTGAAATGGATATGTCATTGTTTTGTGTAAAACCATTTATTTCATATGCTGAAATATTTTTTCAAACTATTTGTGCTTTGATCATTGTAGCAGTTACACTGAGAAACCCCTCCCCCCTCCCTCTCTCTCACCAGCGAGAGCTGTCTCCATATCCTGCTTATATGCATAGTTTCTGGAGATAAGTAGCTTTAAATTTTCCTGTCAAGAGCTTACTGAGTGCAGAAATTTACTTCTGTCTTTATTTTTGATGTGAACAACATATTTTAAGCATGTCTGCGCTCCAGGTGACCTTTTAGCAGTTCTTCTCTTGGACTCAAAATGTATTTGAGTTGGTAGTAAAAAGACTTTTGCGTGTTACCATGGCTTTATTCAACTTTTAGCTGTAAGAGCTAAGATATTAATGTCTTATGTACATTTACTTGAAACATTTGGATTCGATGGGCTTGTCACCAGCCCATCGAATGCTAATATTTTATGTGATTGGGATGACTAGACTATGCAAACATGTCCATTCGTGTTTTATTTGTACAAGGTTTCTTCTATAGTGGCTTTTGTTTACTTATTTATGAATGTCCATTTTTGTTTACCAGGTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAGGTATGGTTTCACATATCATCACTCAAACCTTTCAGAGCACAAATCTGATTCCCATATTTTGTCAGGATATTTGCATGTATGGGAAATATCCCATCACTCATCAGAGTCATTTGGTATATCCAATTGTGAACTGGTCAATGTTTAACTGAATTAGAGTGGGATATGAATTGTAGATGTTGGAAACACTTGAGGGGAGGTTTCCCTGGTCTTGTGCAATTATATATTTAGATTTAGGTAAGGTCAATATTTGTTACAGCAGTCAATCCCTATGATTAATGGGAGTGTGGGAGGGTTTGAGCACTTGCTGCAGCCAGAGTCAAAGGTAGATTAGTGAAACTAGTTACAGATGCAGGAAGTCAATTTAGGAAAGAACTAAATCTTAATAATGCTTTTAGAGTTTTGAAAAAGAGTTTTGCTAACATGAACCACAGACTACTAAAACCATTTACATGGACATGGTCCTATGTGTCTATCAGATTGTAATTGACTATTTATTTTGTTTGATATGCTTCTTATTATATAAGTTCCATGGTATTAAACCTTCTCACAGGGAATATCCTTCTGCTTCAGCGGTTTGTATGAGTCATTCTGACTTCTAGTTCATTTCAGTGCTAGAGCAGATTGATTTTCCCAATACTATGTGTGAAATGTGAAAAGACTTTTAGCAAGTCTCCTTCCCATTGGATACTGATCAAAGAATTGACCTAATATGCCAAACATTAGCATGACTATGAAGTGCAGTGTGAGGATGTGACCCCTAATTCAATTTTGCATCAAAGATCAATCTATGCCTATGCTTGCTTGAGCTGTTCATGTACTCCATTTTCTATAATTGAATGTTCACCCTGTTCCGGGATTGAATTTTGTGATAATTATGCAGGGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCC-GAGTCCTTGGTTAAGTTAG-AT-GTTGTTGTGCTT-GAAGGAGA-TTTT-AACAATG-AGGATG-ATGATGGC-TGGACTC-AAGAAGAATTTGAGTCTCATA</genome_strand>
        <mrna_strand>ATGATACTTCCATGAACTTTCCCAGAAAACATCTCTTCATCTTCTTTCTTCTTTCAA-TTTTTTCCCGCTTT-CCCTTTTTGCGCTCTTTTTTCTCACTTTCTTGTATCCACTGAGAAAAAAAGAAGAAAGTTTTGAGTCTCACTATAC-AAACAGTTGAATAATTAAACAAAGAAAAAGAAAAAGAAAGAAACTTTAGAATCAGATCTGAAAATTTCGAAGAAGAGGAGTG-CTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAAAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAGAAACTTTGCTCATCACTGGAGCCAATTCTTCGAAGAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCGCCAAAAAGAATTGAAGGGCCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACAGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCACAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGGAGTCCTTAGTTAAACTAGAATTGTTGTTGTGCTTGGAAGGAGATTTTTAAACAATGAAGGATGAATGATGGCTTGGACTCAAAGAAGAA-TTGAGTCTCATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E331683" ref_strand="+" ref_description="SGN-E331683 [cTOD-7-B17]">
      <seq>atcttctttcttctttcaatttttttcccgctttccccttgtgtcgctcctttttctcactttcttctatccactgagaaaaaaagaagaaaattttgagtctcactatacgaaacagactgttgaataatcaaacaaagaaaaaagaaagaaactttagatcagatctgaaaatttgaacaagaggagtgttttaatagtcaaagaaaatgcagacaaggtatatggagaaacgtgttttggatccaagtagtagtgaggaaggtcaacctgataggaaaagacctgctcttgcaagtgtcattgttgaagcgctaaaggtggacagtctgcaaaaactctgctcatcactggagccaattcttcgaagagttgttagtgaagaagtggagcgtgctttggctaaacttggacctgctaaacttaatgcaagggtttcgccaaaaagaattgaaggacctgatgggagaaatttgcagcttcagtttccgtccaaactgtcactacctctcttcact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="75224" stop="79189"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75524" g_stop="75821" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="298" r_length="298" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75822" i_stop="76944" i_length="1123">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76945" g_stop="77020" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="299" r_stop="374" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77021" i_stop="77865" i_length="845">
            <donor d_prob="0.710" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77866" g_stop="77924" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="433" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="77925" i_stop="78804" i_length="880">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78805" g_stop="78889" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="518" r_length="85" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E331683" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>518</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331683" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75524" e_stop="75821"/>
          <exon e_start="76945" e_stop="77020"/>
          <exon e_start="77866" e_stop="77924"/>
          <exon e_start="78805" e_stop="78889"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTCTTTCTTCTTTCAATTTTTTTCCCGCTTTCCCCTTTTTTCGCTCCTTTTTCTCACTTTCTTCTATCCACTGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAGGTAATTTGATTTTTAAAAAAATGTTTTTTTTTTAGACTTTTTGTTGAGGGGTATTTTTTCTTTTGGTCTTGTTTTATGTATTATAGCAAATTTTAGTACTGAACAATGCAGTTGGTTTGTTTGAATGATTGGTTATTATGAAAGGTTTTGCTGGGAATATTTGTTGGTTTGAAGAAATTGTAGAGTTTGGGTATTGCAAAAATTATTGTGGAAAGGGGAGAATGGTGATTCTGTTTTGTTGGGGTGGTGGTGAATTAAAATTTTTAGTAAGAAAAATGTGATCTTGATGAATTATGTGTGACGAATGAGGTATTATTATCAAGATCCTTGGAGAGAAGAGAGTGGGAAGCTTTATTGTCTGGTTGTTTGGTGTTGACTGCAAGTGAAGGAAGTTTTTTGATTGAATCTGGCTTGATAACTAGCTTGCTCTTTGTTTTGGTTTATGAGAGAAAAATGAGTATTTTGCTTTGTCATAACTACAAACAATCTACTATTTGATCAGCTGTGGCACTGAAAGAAGAGATTTATAGTGGTTAATTCATGATTCCTTTTTAAGATTTGTGTCATTCGAGGAGGTGATTTGAAGGATTTTGATCATGTTGCAAATAACTTACAATGAATAACATTACATGACTGCCCCTGTCACAGCCCCACAGGACAGAAAGTGGTCCACTAGATCAACTTTTAAATGGGATCTTCACTGTTGGTTGCCAATAAGATTATCCACATTTCATATTCTCAATCATCATTCAGAGGGGAAGTTGTCTCGGTATCCTGCCGGGGACATACTTGAGATTTCTAAGGGAAGTCATTACCAGGTGTTTGTAATCCTGCAAACACTTGTAGCTTTCTCTGAGTGTCTAAGTGATAGATTGATGGTCCACTCTACCCTTTTCTTTTTCTCTTAGCAAGTGATCAGAAAAAAGCTTTTCATTTTAGAGGTTTTTATTTCTGTTGATTGTTTGTTGTGGTATCATCTGACCTGACATCATGTGACCTGGATGTCTTATATTTTCTTAGAGAAGCTGAAATTCAGTGCCCTGTTATAGCTTTACTCATCTTTCTGTGCACTGTTCATGTTAACTGTTGCACACCCTTATTGAAAAGTACATGGTTACTGCAGTGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTTGTAAGATTATTAGGCCCCCTTTAGAACTCTCATCCTATTCATTGGGCATTACTTATGTGAAATTTCATTTAACCAACCAACCACTCCATGGTAACTTGTGAAAGTTTGGTTTTCAATTACATAACTACTGTGGCATGATACATATTTCCAGAAGACTCAGCATGACAGATATTTTACTTCTGAAGGAATACAATGAAATAATCGTAACTGCAAGCTTTGTGACTATACAGGCCAAGAAAAGCCACTGCCAGATATTTGAAATGGATATGTCATTGTTTTGTGTAAAACCATTTATTTCATATGCTGAAATATTTTTTCAAACTATTTGTGCTTTGATCATTGTAGCAGTTACACTGAGAAACCCCTCCCCCCTCCCTCTCTCTCACCAGCGAGAGCTGTCTCCATATCCTGCTTATATGCATAGTTTCTGGAGATAAGTAGCTTTAAATTTTCCTGTCAAGAGCTTACTGAGTGCAGAAATTTACTTCTGTCTTTATTTTTGATGTGAACAACATATTTTAAGCATGTCTGCGCTCCAGGTGACCTTTTAGCAGTTCTTCTCTTGGACTCAAAATGTATTTGAGTTGGTAGTAAAAAGACTTTTGCGTGTTACCATGGCTTTATTCAACTTTTAGCTGTAAGAGCTAAGATATTAATGTCTTATGTACATTTACTTGAAACATTTGGATTCGATGGGCTTGTCACCAGCCCATCGAATGCTAATATTTTATGTGATTGGGATGACTAGACTATGCAAACATGTCCATTCGTGTTTTATTTGTACAAGGTTTCTTCTATAGTGGCTTTTGTTTACTTATTTATGAATGTCCATTTTTGTTTACCAGGTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAGGTATGGTTTCACATATCATCACTCAAACCTTTCAGAGCACAAATCTGATTCCCATATTTTGTCAGGATATTTGCATGTATGGGAAATATCCCATCACTCATCAGAGTCATTTGGTATATCCAATTGTGAACTGGTCAATGTTTAACTGAATTAGAGTGGGATATGAATTGTAGATGTTGGAAACACTTGAGGGGAGGTTTCCCTGGTCTTGTGCAATTATATATTTAGATTTAGGTAAGGTCAATATTTGTTACAGCAGTCAATCCCTATGATTAATGGGAGTGTGGGAGGGTTTGAGCACTTGCTGCAGCCAGAGTCAAAGGTAGATTAGTGAAACTAGTTACAGATGCAGGAAGTCAATTTAGGAAAGAACTAAATCTTAATAATGCTTTTAGAGTTTTGAAAAAGAGTTTTGCTAACATGAACCACAGACTACTAAAACCATTTACATGGACATGGTCCTATGTGTCTATCAGATTGTAATTGACTATTTATTTTGTTTGATATGCTTCTTATTATATAAGTTCCATGGTATTAAACCTTCTCACAGGGAATATCCTTCTGCTTCAGCGGTTTGTATGAGTCATTCTGACTTCTAGTTCATTTCAGTGCTAGAGCAGATTGATTTTCCCAATACTATGTGTGAAATGTGAAAAGACTTTTAGCAAGTCTCCTTCCCATTGGATACTGATCAAAGAATTGACCTAATATGCCAAACATTAGCATGACTATGAAGTGCAGTGTGAGGATGTGACCCCTAATTCAATTTTGCATCAAAGATCAATCTATGCCTATGCTTGCTTGAGCTGTTCATGTACTCCATTTTCTATAATTGAATGTTCACCCTGTTCCGGGATTGAATTTTGTGATAATTATGCAGGGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACT</genome_strand>
        <mrna_strand>ATCTTCTTTCTTCTTTCAATTTTTTTCCCGCTTTCCCCTTGTGTCGCTCCTTTTTCTCACTTTCTTCTATCCACTGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCCGTCCAAACTGTCACTACCTCTCTTCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E746149" ref_strand="+" ref_description="SGN-E746149 [GI|47104905]">
      <seq>ggagaaaaaaagaagaaaattttgagtctcactatacgaaacagactgttgaataatcaaacaaagaaaaaagaaagaaactttagatcagatctgaaaatttgaataagaggagtgttttaatagtcaaagaaaatgcagacaaggtatatggagaaacgtgttttggatccaagtagtagtgaggaaggtcaacctgataggaaaagacctgctcttgcaagtgtcattgttgaagcgctaaaggtggacagtctgcaaaaactctgctcatcactggagccaattcttcgaagagttgttagtgaagaagtggagcgtgctttggctaaacttggacctgctaaacttaatgcaagggtttcgccaaaaagaattgaaggacctgatgggagaaatttgcagcttcagtttcggtccaaactgtcactacctctcttcactggaggaaaagtagaaggagagcagggttccgcaatacatattgtcttgattgatggaaatacaaaccatgttgtaacatcaggtcccgagtccttggttaagttagatgttgttgtgcttgaaggagattttaacaatgaggatgatgatggctggactcaagaagaatttgagtctcatatcgtcaaggagcgtgaaggcaagaggcctctccttactggagaattgcaagtgatattgaaggaaggtgttggcacccttggcgagttgacatttactgacaactccagctggatcagaagcagaaagttcaggctaggcttaaaggtggcatcaggttgctgtgagggaatccgcattcgtgaggcaaaaacagatgccttcactgtcaaggatcatagaggagaattgtacaagaaacattatccacctgcattagatgatgaagtttggagattggaaaagatagggaaagatggatccttccacaagaggctaaataaagctggcatacataaagtggaagactttctgcgtcttgttgtgagagactcgcagaggctccgaaatgtcctgggaagtggaatgtcaaataaaatgtgggatgctcttctggaccatgcaaaaacctgtgtactaagtgggaagctatatgtctactatcctgatgatatgagaaatgtcggtgttgtttttaataatatctatgaattatgtggtttaatctctggcggacagtatcattcaatggattctctttcaggcaatcagaagatatatgtggatactttagttaagaaggcgtatgacaactggatgcaagttgttgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcagaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgctgctagcacgcctaatccttataagggagctgaggacttcttaacagaggaagagatacgtatgaaaagtcatgagatgctcgaaaatgaagacatgcaacatttgctacgtatgttcagcatgggacagggtcatgcgtcttctagtgttgcagaagagaattaccagtatggatcagcatacatgcccagcatgtcttctaattttggttttgatgaggaacgtacacgttcttcaggtaaggctgttgtagggtggctcaaactcaaagctgccttgagatggggcattttcataaggaagaaagctgcagaaagaagagcacaaattactgaactggatgactcttagatttgattttccccttagcaaccacttggatatgatgtgtaagggctttcctctaagaagcatattatcgatcttggaatttggtttgacaatccatatgcatctggtgctgggttgggctcaatctgaacctaggagcctcttataatgtacagttatgcctgtccatggagattgctctctctccattaacagaataacataagcttatgatagttctctcagcatattatatgcagttcaaagactggagcagttttcatggctctagctgaagggaaattcccatggtttagacctgatttcttctactagggactgaaggaagtgacttcatttgccttgtgctaactcaagattgtagcaagtatgttttgatgagttatgtttgactgatgctgtaatttttagtgttttgttgtaatgagtttatcaaaagaaaacataatatttgtctccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="75299" stop="82799"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75598" g_stop="75821" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="224" r_length="224" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75822" i_stop="76944" i_length="1123">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76945" g_stop="77020" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="300" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77021" i_stop="77865" i_length="845">
            <donor d_prob="0.710" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77866" g_stop="77924" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="359" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="77925" i_stop="78804" i_length="880">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78805" g_stop="79298" g_length="494"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="853" r_length="494" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="79299" i_stop="79384" i_length="86">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="79385" g_stop="79545" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="854" r_stop="1014" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="79546" i_stop="79640" i_length="95">
            <donor d_prob="0.854" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="79641" g_stop="79844" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="1015" r_stop="1218" r_length="204" r_score="0.995"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="79845" i_stop="80651" i_length="807">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="80652" g_stop="80889" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1219" r_stop="1456" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="80890" i_stop="81487" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="81488" g_stop="82490" g_length="1003"/>
          <reference_exon_boundary r_type="cDNA" r_start="1457" r_stop="2459" r_length="1003" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2461" polyA_stop="2475"/>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E746149" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>2459</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E746149" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75598" e_stop="75821"/>
          <exon e_start="76945" e_stop="77020"/>
          <exon e_start="77866" e_stop="77924"/>
          <exon e_start="78805" e_stop="79298"/>
          <exon e_start="79385" e_stop="79545"/>
          <exon e_start="79641" e_stop="79844"/>
          <exon e_start="80652" e_stop="80889"/>
          <exon e_start="81488" e_stop="82490"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAGGTAATTTGATTTTTAAAAAAATGTTTTTTTTTTAGACTTTTTGTTGAGGGGTATTTTTTCTTTTGGTCTTGTTTTATGTATTATAGCAAATTTTAGTACTGAACAATGCAGTTGGTTTGTTTGAATGATTGGTTATTATGAAAGGTTTTGCTGGGAATATTTGTTGGTTTGAAGAAATTGTAGAGTTTGGGTATTGCAAAAATTATTGTGGAAAGGGGAGAATGGTGATTCTGTTTTGTTGGGGTGGTGGTGAATTAAAATTTTTAGTAAGAAAAATGTGATCTTGATGAATTATGTGTGACGAATGAGGTATTATTATCAAGATCCTTGGAGAGAAGAGAGTGGGAAGCTTTATTGTCTGGTTGTTTGGTGTTGACTGCAAGTGAAGGAAGTTTTTTGATTGAATCTGGCTTGATAACTAGCTTGCTCTTTGTTTTGGTTTATGAGAGAAAAATGAGTATTTTGCTTTGTCATAACTACAAACAATCTACTATTTGATCAGCTGTGGCACTGAAAGAAGAGATTTATAGTGGTTAATTCATGATTCCTTTTTAAGATTTGTGTCATTCGAGGAGGTGATTTGAAGGATTTTGATCATGTTGCAAATAACTTACAATGAATAACATTACATGACTGCCCCTGTCACAGCCCCACAGGACAGAAAGTGGTCCACTAGATCAACTTTTAAATGGGATCTTCACTGTTGGTTGCCAATAAGATTATCCACATTTCATATTCTCAATCATCATTCAGAGGGGAAGTTGTCTCGGTATCCTGCCGGGGACATACTTGAGATTTCTAAGGGAAGTCATTACCAGGTGTTTGTAATCCTGCAAACACTTGTAGCTTTCTCTGAGTGTCTAAGTGATAGATTGATGGTCCACTCTACCCTTTTCTTTTTCTCTTAGCAAGTGATCAGAAAAAAGCTTTTCATTTTAGAGGTTTTTATTTCTGTTGATTGTTTGTTGTGGTATCATCTGACCTGACATCATGTGACCTGGATGTCTTATATTTTCTTAGAGAAGCTGAAATTCAGTGCCCTGTTATAGCTTTACTCATCTTTCTGTGCACTGTTCATGTTAACTGTTGCACACCCTTATTGAAAAGTACATGGTTACTGCAGTGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTTGTAAGATTATTAGGCCCCCTTTAGAACTCTCATCCTATTCATTGGGCATTACTTATGTGAAATTTCATTTAACCAACCAACCACTCCATGGTAACTTGTGAAAGTTTGGTTTTCAATTACATAACTACTGTGGCATGATACATATTTCCAGAAGACTCAGCATGACAGATATTTTACTTCTGAAGGAATACAATGAAATAATCGTAACTGCAAGCTTTGTGACTATACAGGCCAAGAAAAGCCACTGCCAGATATTTGAAATGGATATGTCATTGTTTTGTGTAAAACCATTTATTTCATATGCTGAAATATTTTTTCAAACTATTTGTGCTTTGATCATTGTAGCAGTTACACTGAGAAACCCCTCCCCCCTCCCTCTCTCTCACCAGCGAGAGCTGTCTCCATATCCTGCTTATATGCATAGTTTCTGGAGATAAGTAGCTTTAAATTTTCCTGTCAAGAGCTTACTGAGTGCAGAAATTTACTTCTGTCTTTATTTTTGATGTGAACAACATATTTTAAGCATGTCTGCGCTCCAGGTGACCTTTTAGCAGTTCTTCTCTTGGACTCAAAATGTATTTGAGTTGGTAGTAAAAAGACTTTTGCGTGTTACCATGGCTTTATTCAACTTTTAGCTGTAAGAGCTAAGATATTAATGTCTTATGTACATTTACTTGAAACATTTGGATTCGATGGGCTTGTCACCAGCCCATCGAATGCTAATATTTTATGTGATTGGGATGACTAGACTATGCAAACATGTCCATTCGTGTTTTATTTGTACAAGGTTTCTTCTATAGTGGCTTTTGTTTACTTATTTATGAATGTCCATTTTTGTTTACCAGGTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAGGTATGGTTTCACATATCATCACTCAAACCTTTCAGAGCACAAATCTGATTCCCATATTTTGTCAGGATATTTGCATGTATGGGAAATATCCCATCACTCATCAGAGTCATTTGGTATATCCAATTGTGAACTGGTCAATGTTTAACTGAATTAGAGTGGGATATGAATTGTAGATGTTGGAAACACTTGAGGGGAGGTTTCCCTGGTCTTGTGCAATTATATATTTAGATTTAGGTAAGGTCAATATTTGTTACAGCAGTCAATCCCTATGATTAATGGGAGTGTGGGAGGGTTTGAGCACTTGCTGCAGCCAGAGTCAAAGGTAGATTAGTGAAACTAGTTACAGATGCAGGAAGTCAATTTAGGAAAGAACTAAATCTTAATAATGCTTTTAGAGTTTTGAAAAAGAGTTTTGCTAACATGAACCACAGACTACTAAAACCATTTACATGGACATGGTCCTATGTGTCTATCAGATTGTAATTGACTATTTATTTTGTTTGATATGCTTCTTATTATATAAGTTCCATGGTATTAAACCTTCTCACAGGGAATATCCTTCTGCTTCAGCGGTTTGTATGAGTCATTCTGACTTCTAGTTCATTTCAGTGCTAGAGCAGATTGATTTTCCCAATACTATGTGTGAAATGTGAAAAGACTTTTAGCAAGTCTCCTTCCCATTGGATACTGATCAAAGAATTGACCTAATATGCCAAACATTAGCATGACTATGAAGTGCAGTGTGAGGATGTGACCCCTAATTCAATTTTGCATCAAAGATCAATCTATGCCTATGCTTGCTTGAGCTGTTCATGTACTCCATTTTCTATAATTGAATGTTCACCCTGTTCCGGGATTGAATTTTGTGATAATTATGCAGGGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCCAGCTGGATCAGAAGCAGAAAGTTCAGGCTAGGCTTAAAGGTGGCATCAGGTTGCTGTGAGGGAATCCGCATTCGTGAGGCAAAAACAGATGCCTTCACTGTCAAGGATCATAGAGGAGAATGTAAGCCCATATAATGTGTCTTTTGTATAGAAATGACAATTATGTTTGTTGAGGTTTGTAGTAACTCCAATCTTGTTTCCTTGCAGTGTACAAGAAACATTATCCACCTGCATTAGATGATGAAGTTTGGAGATTGGAAAAGATAGGGAAAGATGGATCCTTCCACAAGAGGCTAAATAAAGCTGGCATACATAAAGTGGAAGACTTTCTGCGTCTTGTTGTGAGAGACTCGCAGAGGCTCCGAAATGTAAAATTTCAAACTTGACATGTTGGAGAAAAAGAACTATAATTGTTAGTTGTAACTATATGATTAGTTTTTTGTTAATCATCTTGTTATCTCAGGTCCTGGGAAGTGGAATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAGGTTTGTAATCTGTAATTATTTTCTCTCTTTTGTATAATTTGGTATTGTGGATTCATCTAGACATGCTTAAGGGAAAATGAAGAAGGAAGACATGGGGGCTATGGTTTCCCATGCTTACCCAACCATCTTTTACAATGGATTACCAAGAGCTTTTTTTTCTCCTATCTGTGGCGTTTTGTGAAGTGACTACTCTTCAAGAAGCAAAACACATTCATTTTCATGTTTGTCTCCTCCCAGATCACATCTAGAAGAGATTTACTAACAAAAGTCCCTCAGAACAAACTTTCCTGCTTGCTACAGTTCGAAAAAACTTTTTCTTAGAAATTTAGCTGTTTGTAACTTAGAGATATATCTGCCAAGTTCTTATGGGATATTATCCAGAAATTAGTTGCTGAAGCAATGAAATGCCTTTGATTTAGCTTCTCTGTTCTTTTTCTACCTTTTACAGGCAATAGTTAGAAGGATACAAACTGCTGATTCTGTAAAAATTGATTACAATGAAATTTCCGAAGGCAATGTTGTACCCTTCGAGTTGCTTTGTATATATAGAATATTCAACCCTTTTGACCATATCCAAACAATATTTACAACTAATTTTATTTGATACTGCTAGAATTGCCACACTAGTTAGATGCGGTTTGCACTTTCTCCTTTGTCCCTGTGACATTTCGATACTTCACATAATAGTGGTCAATGGAGTTGTGAGAGTTGCTATCATTTGCATAAATCGACCTTTTTTGGATGATAGTTCTTTTTTTCCCGAGTTTATGATGAAGTTATTAAGCAAACATCAAACAAAATTTGCAGATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGATGAGGAACGTACACGTTCTTCAGGTAAGGCTGTTGTAGGGTGGCTCAAACTCAAAGCTGCCTTGAGATGGGGCATTTTCATAAGGAAGAAAGCTGCAGAAAGAAGAGCACAAATTACTGAACTGGATGACTCTTAGATTTGATTTTCCCCTTAGCAACCACTTGGATATGATGTGTAAGGGCTTTCCTCTAAGAAGCATATTATCGATCTTGGAATTTGGTTTGACAATCCATATGCATCTGGTGCTGGGTTGGGCTCAATCTGAACCTAGGAGCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGATTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTC</genome_strand>
        <mrna_strand>GGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAATAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCCAGCTGGATCAGAAGCAGAAAGTTCAGGCTAGGCTTAAAGGTGGCATCAGGTTGCTGTGAGGGAATCCGCATTCGTGAGGCAAAAACAGATGCCTTCACTGTCAAGGATCATAGAGGAGAAT......................................................................................TGTACAAGAAACATTATCCACCTGCATTAGATGATGAAGTTTGGAGATTGGAAAAGATAGGGAAAGATGGATCCTTCCACAAGAGGCTAAATAAAGCTGGCATACATAAAGTGGAAGACTTTCTGCGTCTTGTTGTGAGAGACTCGCAGAGGCTCCGAAAT...............................................................................................GTCCTGGGAAGTGGAATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGGCAATCAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGATGAGGAACGTACACGTTCTTCAGGTAAGGCTGTTGTAGGGTGGCTCAAACTCAAAGCTGCCTTGAGATGGGGCATTTTCATAAGGAAGAAAGCTGCAGAAAGAAGAGCACAAATTACTGAACTGGATGACTCTTAGATTTGATTTTCCCCTTAGCAACCACTTGGATATGATGTGTAAGGGCTTTCCTCTAAGAAGCATATTATCGATCTTGGAATTTGGTTTGACAATCCATATGCATCTGGTGCTGGGTTGGGCTCAATCTGAACCTAGGAGCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGATTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E487262" ref_strand="+" ref_description="SGN-E487262 [cSTE-25-A19]">
      <seq>ggagtgcttaatagtcaaagaaaatgcagacaaggtatatggaaaaacgtgttttggatccaagtagtagtgaggaaggtcaacctgataggaaaagacctgctcttgcaagtgtcattgttgaagcgctaaaggtggacagtctgcagaaactctgctcatcactggagccaattcttcgaagagttgttagtgaagaagtggagcgtgctttggctaaacttggacctgctaaacttaatgcaagggtttcgccaaaaagaattgaagggcctgatgggagaaatttgcagcttcagtttcggtccaaactgtcactacctctcttcacaggaggaaaagtagaaggagagcagggttccgcaatacatattgtcttgattgatggaaatacaaaccatgttgtaacatcaggtcccgagtccttagttaaactagatgttgttgtgcttgaaggagattttaacaatgaggatgatgatggctggactcaagaagaatttgagtctcatatagcgaaggagcgtgaaggcaagaggcctctccttactggagaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="75417" stop="79415"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="75709" g_stop="75821" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="75822" i_stop="76944" i_length="1123">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.931" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76945" g_stop="77020" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="188" r_length="76" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77021" i_stop="77865" i_length="845">
            <donor d_prob="0.710" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="77866" g_stop="77924" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="247" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="77925" i_stop="78804" i_length="880">
            <donor d_prob="0.951" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78805" g_stop="79115" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="558" r_length="311" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E487262" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E487262" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="75709" e_stop="75821"/>
          <exon e_start="76945" e_stop="77020"/>
          <exon e_start="77866" e_stop="77924"/>
          <exon e_start="78805" e_stop="79115"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAGGTAATTTGATTTTTAAAAAAATGTTTTTTTTTTAGACTTTTTGTTGAGGGGTATTTTTTCTTTTGGTCTTGTTTTATGTATTATAGCAAATTTTAGTACTGAACAATGCAGTTGGTTTGTTTGAATGATTGGTTATTATGAAAGGTTTTGCTGGGAATATTTGTTGGTTTGAAGAAATTGTAGAGTTTGGGTATTGCAAAAATTATTGTGGAAAGGGGAGAATGGTGATTCTGTTTTGTTGGGGTGGTGGTGAATTAAAATTTTTAGTAAGAAAAATGTGATCTTGATGAATTATGTGTGACGAATGAGGTATTATTATCAAGATCCTTGGAGAGAAGAGAGTGGGAAGCTTTATTGTCTGGTTGTTTGGTGTTGACTGCAAGTGAAGGAAGTTTTTTGATTGAATCTGGCTTGATAACTAGCTTGCTCTTTGTTTTGGTTTATGAGAGAAAAATGAGTATTTTGCTTTGTCATAACTACAAACAATCTACTATTTGATCAGCTGTGGCACTGAAAGAAGAGATTTATAGTGGTTAATTCATGATTCCTTTTTAAGATTTGTGTCATTCGAGGAGGTGATTTGAAGGATTTTGATCATGTTGCAAATAACTTACAATGAATAACATTACATGACTGCCCCTGTCACAGCCCCACAGGACAGAAAGTGGTCCACTAGATCAACTTTTAAATGGGATCTTCACTGTTGGTTGCCAATAAGATTATCCACATTTCATATTCTCAATCATCATTCAGAGGGGAAGTTGTCTCGGTATCCTGCCGGGGACATACTTGAGATTTCTAAGGGAAGTCATTACCAGGTGTTTGTAATCCTGCAAACACTTGTAGCTTTCTCTGAGTGTCTAAGTGATAGATTGATGGTCCACTCTACCCTTTTCTTTTTCTCTTAGCAAGTGATCAGAAAAAAGCTTTTCATTTTAGAGGTTTTTATTTCTGTTGATTGTTTGTTGTGGTATCATCTGACCTGACATCATGTGACCTGGATGTCTTATATTTTCTTAGAGAAGCTGAAATTCAGTGCCCTGTTATAGCTTTACTCATCTTTCTGTGCACTGTTCATGTTAACTGTTGCACACCCTTATTGAAAAGTACATGGTTACTGCAGTGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTTGTAAGATTATTAGGCCCCCTTTAGAACTCTCATCCTATTCATTGGGCATTACTTATGTGAAATTTCATTTAACCAACCAACCACTCCATGGTAACTTGTGAAAGTTTGGTTTTCAATTACATAACTACTGTGGCATGATACATATTTCCAGAAGACTCAGCATGACAGATATTTTACTTCTGAAGGAATACAATGAAATAATCGTAACTGCAAGCTTTGTGACTATACAGGCCAAGAAAAGCCACTGCCAGATATTTGAAATGGATATGTCATTGTTTTGTGTAAAACCATTTATTTCATATGCTGAAATATTTTTTCAAACTATTTGTGCTTTGATCATTGTAGCAGTTACACTGAGAAACCCCTCCCCCCTCCCTCTCTCTCACCAGCGAGAGCTGTCTCCATATCCTGCTTATATGCATAGTTTCTGGAGATAAGTAGCTTTAAATTTTCCTGTCAAGAGCTTACTGAGTGCAGAAATTTACTTCTGTCTTTATTTTTGATGTGAACAACATATTTTAAGCATGTCTGCGCTCCAGGTGACCTTTTAGCAGTTCTTCTCTTGGACTCAAAATGTATTTGAGTTGGTAGTAAAAAGACTTTTGCGTGTTACCATGGCTTTATTCAACTTTTAGCTGTAAGAGCTAAGATATTAATGTCTTATGTACATTTACTTGAAACATTTGGATTCGATGGGCTTGTCACCAGCCCATCGAATGCTAATATTTTATGTGATTGGGATGACTAGACTATGCAAACATGTCCATTCGTGTTTTATTTGTACAAGGTTTCTTCTATAGTGGCTTTTGTTTACTTATTTATGAATGTCCATTTTTGTTTACCAGGTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAGGTATGGTTTCACATATCATCACTCAAACCTTTCAGAGCACAAATCTGATTCCCATATTTTGTCAGGATATTTGCATGTATGGGAAATATCCCATCACTCATCAGAGTCATTTGGTATATCCAATTGTGAACTGGTCAATGTTTAACTGAATTAGAGTGGGATATGAATTGTAGATGTTGGAAACACTTGAGGGGAGGTTTCCCTGGTCTTGTGCAATTATATATTTAGATTTAGGTAAGGTCAATATTTGTTACAGCAGTCAATCCCTATGATTAATGGGAGTGTGGGAGGGTTTGAGCACTTGCTGCAGCCAGAGTCAAAGGTAGATTAGTGAAACTAGTTACAGATGCAGGAAGTCAATTTAGGAAAGAACTAAATCTTAATAATGCTTTTAGAGTTTTGAAAAAGAGTTTTGCTAACATGAACCACAGACTACTAAAACCATTTACATGGACATGGTCCTATGTGTCTATCAGATTGTAATTGACTATTTATTTTGTTTGATATGCTTCTTATTATATAAGTTCCATGGTATTAAACCTTCTCACAGGGAATATCCTTCTGCTTCAGCGGTTTGTATGAGTCATTCTGACTTCTAGTTCATTTCAGTGCTAGAGCAGATTGATTTTCCCAATACTATGTGTGAAATGTGAAAAGACTTTTAGCAAGTCTCCTTCCCATTGGATACTGATCAAAGAATTGACCTAATATGCCAAACATTAGCATGACTATGAAGTGCAGTGTGAGGATGTGACCCCTAATTCAATTTTGCATCAAAGATCAATCTATGCCTATGCTTGCTTGAGCTGTTCATGTACTCCATTTTCTATAATTGAATGTTCACCCTGTTCCGGGATTGAATTTTGTGATAATTATGCAGGGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAAT</genome_strand>
        <mrna_strand>GGAGTGCT-TAATAGTCAAAGAAAATGCAGACAAGGTATATGGAAAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAGAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCGCCAAAAAGAATTGAAGGGCCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACAGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTAGTTAAACTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATAGCGAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E279167" ref_strand="-" ref_description="SGN-E279167 [cLEL-4-P21](-)">
      <seq>gcacgagctttggctaaacttggacctgctaaacttaatgcaagggtttcgccaaaaagaattgaaggacctgatgcgagaaatttgcagcttcagtttcggtccaaactgtcactacctctcttcactggaggaaaagtagaaggagagcagggttccgcaatacatattgtcttgattgatggaaatacaaaccatgttgtaacatcaggtcccgagtccttggttaagttagatgttgttgtgcttgaaggagattttaacaatgaggatgatgatggctggactcaagaagaatttgagtctcatatcgtcaaggagcgtgaaggcaagaggcctctccttactggagaattgcaagtgatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="77584" stop="79428"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77881" g_stop="77924" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="0.932"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77925" i_stop="78804" i_length="880">
            <donor d_prob="0.951" d_score="0.93"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78805" g_stop="79128" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="368" r_length="324" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E279167" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>368</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E279167" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="77881" e_stop="77924"/>
          <exon e_start="78805" e_stop="79128"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAGGTATGGTTTCACATATCATCACTCAAACCTTTCAGAGCACAAATCTGATTCCCATATTTTGTCAGGATATTTGCATGTATGGGAAATATCCCATCACTCATCAGAGTCATTTGGTATATCCAATTGTGAACTGGTCAATGTTTAACTGAATTAGAGTGGGATATGAATTGTAGATGTTGGAAACACTTGAGGGGAGGTTTCCCTGGTCTTGTGCAATTATATATTTAGATTTAGGTAAGGTCAATATTTGTTACAGCAGTCAATCCCTATGATTAATGGGAGTGTGGGAGGGTTTGAGCACTTGCTGCAGCCAGAGTCAAAGGTAGATTAGTGAAACTAGTTACAGATGCAGGAAGTCAATTTAGGAAAGAACTAAATCTTAATAATGCTTTTAGAGTTTTGAAAAAGAGTTTTGCTAACATGAACCACAGACTACTAAAACCATTTACATGGACATGGTCCTATGTGTCTATCAGATTGTAATTGACTATTTATTTTGTTTGATATGCTTCTTATTATATAAGTTCCATGGTATTAAACCTTCTCACAGGGAATATCCTTCTGCTTCAGCGGTTTGTATGAGTCATTCTGACTTCTAGTTCATTTCAGTGCTAGAGCAGATTGATTTTCCCAATACTATGTGTGAAATGTGAAAAGACTTTTAGCAAGTCTCCTTCCCATTGGATACTGATCAAAGAATTGACCTAATATGCCAAACATTAGCATGACTATGAAGTGCAGTGTGAGGATGTGACCCCTAATTCAATTTTGCATCAAAGATCAATCTATGCCTATGCTTGCTTGAGCTGTTCATGTACTCCATTTTCTATAATTGAATGTTCACCCTGTTCCGGGATTGAATTTTGTGATAATTATGCAGGGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATT</genome_strand>
        <mrna_strand>GCACGAGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCGCCAAAAAGAATTGAAGGACCTGATGCGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E332029" ref_strand="+" ref_description="SGN-E332029 [cTOD-16-H20]">
      <seq>aagaattgaaggacctgatgggagaaatttgcagcttcagtttcggtccaaactgtcactacctctcttcactggaggaaaagtagaaggagagcagggttccgcaatacatattgtcttgattgatggaaatacaaaccatgttgtaacatcaggtcccgagtccttggttaagttagatgttgttgtgcttgaaggagattttaacaatgaggatgatgatggctggactcaagaagaatttgagtctcatatcgtcaaggagcgtgaaggcaagaggcctctccttactggagaattgcaagtgatattgaaggaaggtgttggcacccttggcgagttgacatttactgacaactccagctggatcagaagcagaaagttcaggctaggcttaaaggtggcatcaggttgctgtgagggaatccgcattcgtgaggcaaaaacagatgccttcactgtcaaggatcatagaggagaattgtacaagaaacattatccacctgcattagatgatgaagtttggagattggaaaagatagggaaagatggatccttccacaagaggctaaatacagctggcatacataaagtggaagactttctgcgtcttgttgtgagagactcgcagaggctccgaaatgtcctgngaagtggaaatgtcaataaaatgtgggatgctcttctggaccatgcaaaaacctgtgtactaagtgggaagctatatgtctactatcctgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="78517" stop="80040"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78817" g_stop="79298" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="482" r_length="482" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79299" i_stop="79384" i_length="86">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79385" g_stop="79545" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="643" r_length="161" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79546" i_stop="79640" i_length="95">
            <donor d_prob="0.854" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="79641" g_stop="79740" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="644" r_stop="743" r_length="100" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E332029" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>743</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332029" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78817" e_stop="79298"/>
          <exon e_start="79385" e_stop="79545"/>
          <exon e_start="79641" e_stop="79740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCCAGCTGGATCAGAAGCAGAAAGTTCAGGCTAGGCTTAAAGGTGGCATCAGGTTGCTGTGAGGGAATCCGCATTCGTGAGGCAAAAACAGATGCCTTCACTGTCAAGGATCATAGAGGAGAATGTAAGCCCATATAATGTGTCTTTTGTATAGAAATGACAATTATGTTTGTTGAGGTTTGTAGTAACTCCAATCTTGTTTCCTTGCAGTGTACAAGAAACATTATCCACCTGCATTAGATGATGAAGTTTGGAGATTGGAAAAGATAGGGAAAGATGGATCCTTCCACAAGAGGCTAAATAAAGCTGGCATACATAAAGTGGAAGACTTTCTGCGTCTTGTTGTGAGAGACTCGCAGAGGCTCCGAAATGTAAAATTTCAAACTTGACATGTTGGAGAAAAAGAACTATAATTGTTAGTTGTAACTATATGATTAGTTTTTTGTTAATCATCTTGTTATCTCAGGTCCTGGGAAGTGG-AATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATG</genome_strand>
        <mrna_strand>AAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCCAGCTGGATCAGAAGCAGAAAGTTCAGGCTAGGCTTAAAGGTGGCATCAGGTTGCTGTGAGGGAATCCGCATTCGTGAGGCAAAAACAGATGCCTTCACTGTCAAGGATCATAGAGGAGAAT......................................................................................TGTACAAGAAACATTATCCACCTGCATTAGATGATGAAGTTTGGAGATTGGAAAAGATAGGGAAAGATGGATCCTTCCACAAGAGGCTAAATACAGCTGGCATACATAAAGTGGAAGACTTTCTGCGTCTTGTTGTGAGAGACTCGCAGAGGCTCCGAAAT...............................................................................................GTCCTGNGAAGTGGAAATGTC-AATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E441281" ref_strand="+" ref_description="SGN-E441281 [cSTA-29-L2]">
      <seq>gaaatttgcagcttcagtttcggtccaaactgtcactacctctcttcacaggaggaaaagtagaaggagagcagggttccgcaatacatattgtcttgattgatggaaatacaaaccatgttgtaacatcaggtcccgagtccttagttaaactagatgttgttgtgcttgaaggagattttaacaatgaggatgatgatggctggactcaagaagaatttgagtctcatatagtgaaggagcgtgaaggcaagaggcctctccttactggagaattgcaagtgatattgaaggaaggtgttggcacccttggcgagttgacatttactgacaactccagctggatcagaagcagaaagttcaggctaggcttaaaggtagcatcaggttgctgtgagggaatccgcattcgtgaggcaaaaacagatgccttcactgtcaaggatcatagaggagaattgtacaagaaacattatccacctgcattagatgatgaagtttggagattggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="78540" stop="79738"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78840" g_stop="79298" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="459" r_length="459" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79299" i_stop="79384" i_length="86">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.964" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79385" g_stop="79438" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="513" r_length="54" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E441281" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E441281" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78840" e_stop="79298"/>
          <exon e_start="79385" e_stop="79438"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCCAGCTGGATCAGAAGCAGAAAGTTCAGGCTAGGCTTAAAGGTGGCATCAGGTTGCTGTGAGGGAATCCGCATTCGTGAGGCAAAAACAGATGCCTTCACTGTCAAGGATCATAGAGGAGAATGTAAGCCCATATAATGTGTCTTTTGTATAGAAATGACAATTATGTTTGTTGAGGTTTGTAGTAACTCCAATCTTGTTTCCTTGCAGTGTACAAGAAACATTATCCACCTGCATTAGATGATGAAGTTTGGAGATTGGAAA</genome_strand>
        <mrna_strand>GAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACAGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTAGTTAAACTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATAGTGAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCCAGCTGGATCAGAAGCAGAAAGTTCAGGCTAGGCTTAAAGGTAGCATCAGGTTGCTGTGAGGGAATCCGCATTCGTGAGGCAAAAACAGATGCCTTCACTGTCAAGGATCATAGAGGAGAAT......................................................................................TGTACAAGAAACATTATCCACCTGCATTAGATGATGAAGTTTGGAGATTGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E458331" ref_strand="+" ref_description="SGN-E458331 [cPRO-5-K8]">
      <seq>gagagcagggttccacaatacatattgtcttgattgatggaaatacaaaccatgttgtaacatcaggtcccgagtccttagttaaactagatgttgttgtgcttgaaggagattttaacaatgaggatgatgatggctggactcaagaagaatttgagtctcatatagtgaaggagcgtgaaggcaagaggcctctccttactggagaattgcaagtgatattgaaggaaggtgttggcacccttggcgagttgacatttactga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="78606" stop="79470"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78906" g_stop="79170" g_length="265"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="265" r_length="265" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E458331" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>265</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E458331" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78906" e_stop="79170"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGA</genome_strand>
        <mrna_strand>GAGAGCAGGGTTCCACAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTAGTTAAACTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATAGTGAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E305959" ref_strand="+" ref_description="SGN-E305959 [cLEY-17-I4]">
      <seq>tgagagactcgcagaggctccgaaatgtcctgggaagtggaatgtcaaataaaatgtgggatgctcttctggaccatgcaaaaacctgtgtactaagtgggaagctatatgtctactatcctgatgatatgagaaatgtcggtgttgtttttaataatatctatgaattatgtggtttaatctctggcggacagtatcattcaatggattctctttcagacaatcagaagatatatgtggatactttagttaagaaggcgtatgacaactggatgcaagttgttgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcagaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="79220" stop="81984"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79520" g_stop="79545" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="26" r_length="26" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79546" i_stop="79640" i_length="95">
            <donor d_prob="0.854" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79641" g_stop="79844" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="230" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79845" i_stop="80651" i_length="807">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80652" g_stop="80889" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="468" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80890" i_stop="81487" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="81488" g_stop="81684" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="665" r_length="197" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E305959" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>665</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E305959" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79520" e_stop="79545"/>
          <exon e_start="79641" e_stop="79844"/>
          <exon e_start="80652" e_stop="80889"/>
          <exon e_start="81488" e_stop="81684"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGAGACTCGCAGAGGCTCCGAAATGTAAAATTTCAAACTTGACATGTTGGAGAAAAAGAACTATAATTGTTAGTTGTAACTATATGATTAGTTTTTTGTTAATCATCTTGTTATCTCAGGTCCTGGGAAGTGGAATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAGGTTTGTAATCTGTAATTATTTTCTCTCTTTTGTATAATTTGGTATTGTGGATTCATCTAGACATGCTTAAGGGAAAATGAAGAAGGAAGACATGGGGGCTATGGTTTCCCATGCTTACCCAACCATCTTTTACAATGGATTACCAAGAGCTTTTTTTTCTCCTATCTGTGGCGTTTTGTGAAGTGACTACTCTTCAAGAAGCAAAACACATTCATTTTCATGTTTGTCTCCTCCCAGATCACATCTAGAAGAGATTTACTAACAAAAGTCCCTCAGAACAAACTTTCCTGCTTGCTACAGTTCGAAAAAACTTTTTCTTAGAAATTTAGCTGTTTGTAACTTAGAGATATATCTGCCAAGTTCTTATGGGATATTATCCAGAAATTAGTTGCTGAAGCAATGAAATGCCTTTGATTTAGCTTCTCTGTTCTTTTTCTACCTTTTACAGGCAATAGTTAGAAGGATACAAACTGCTGATTCTGTAAAAATTGATTACAATGAAATTTCCGAAGGCAATGTTGTACCCTTCGAGTTGCTTTGTATATATAGAATATTCAACCCTTTTGACCATATCCAAACAATATTTACAACTAATTTTATTTGATACTGCTAGAATTGCCACACTAGTTAGATGCGGTTTGCACTTTCTCCTTTGTCCCTGTGACATTTCGATACTTCACATAATAGTGGTCAATGGAGTTGTGAGAGTTGCTATCATTTGCATAAATCGACCTTTTTTGGATGATAGTTCTTTTTTTCCCGAGTTTATGATGAAGTTATTAAGCAAACATCAAACAAAATTTGCAGATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCT</genome_strand>
        <mrna_strand>TGAGAGACTCGCAGAGGCTCCGAAAT...............................................................................................GTCCTGGGAAGTGGAATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E278739" ref_strand="+" ref_description="SGN-E278739 [cLER-2-A22]">
      <seq>cgaaatgtcctgggaagtggaatgtcaaataaaatgtgggatgctcttctggaccatgcaaaaacctgtgtactaagtgggaagctatatgtctactatcctgatgatatgagaaatgtcggtgttgtttttaataatatctatgaattatgtggtttaatctctggcggacagtatcattcaatggattctctttcagacaatcagaagatatatgtggatactttagttaagaaggcgtatgacaactggatgcaagttgatgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgattcctcagaaccatttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="79339" stop="81892"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79540" g_stop="79545" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="6" r_length="6" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79546" i_stop="79640" i_length="95">
            <donor d_prob="0.854" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79641" g_stop="79844" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="210" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79845" i_stop="80651" i_length="807">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80652" g_stop="80889" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="448" r_length="238" r_score="0.996"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80890" i_stop="81487" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="81488" g_stop="81592" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="553" r_length="105" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E278739" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E278739" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79540" e_stop="79545"/>
          <exon e_start="79641" e_stop="79844"/>
          <exon e_start="80652" e_stop="80889"/>
          <exon e_start="81488" e_stop="81592"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAATGTAAAATTTCAAACTTGACATGTTGGAGAAAAAGAACTATAATTGTTAGTTGTAACTATATGATTAGTTTTTTGTTAATCATCTTGTTATCTCAGGTCCTGGGAAGTGGAATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAGGTTTGTAATCTGTAATTATTTTCTCTCTTTTGTATAATTTGGTATTGTGGATTCATCTAGACATGCTTAAGGGAAAATGAAGAAGGAAGACATGGGGGCTATGGTTTCCCATGCTTACCCAACCATCTTTTACAATGGATTACCAAGAGCTTTTTTTTCTCCTATCTGTGGCGTTTTGTGAAGTGACTACTCTTCAAGAAGCAAAACACATTCATTTTCATGTTTGTCTCCTCCCAGATCACATCTAGAAGAGATTTACTAACAAAAGTCCCTCAGAACAAACTTTCCTGCTTGCTACAGTTCGAAAAAACTTTTTCTTAGAAATTTAGCTGTTTGTAACTTAGAGATATATCTGCCAAGTTCTTATGGGATATTATCCAGAAATTAGTTGCTGAAGCAATGAAATGCCTTTGATTTAGCTTCTCTGTTCTTTTTCTACCTTTTACAGGCAATAGTTAGAAGGATACAAACTGCTGATTCTGTAAAAATTGATTACAATGAAATTTCCGAAGGCAATGTTGTACCCTTCGAGTTGCTTTGTATATATAGAATATTCAACCCTTTTGACCATATCCAAACAATATTTACAACTAATTTTATTTGATACTGCTAGAATTGCCACACTAGTTAGATGCGGTTTGCACTTTCTCCTTTGTCCCTGTGACATTTCGATACTTCACATAATAGTGGTCAATGGAGTTGTGAGAGTTGCTATCATTTGCATAAATCGACCTTTTTTGGATGATAGTTCTTTTTTTCCCGAGTTTATGATGAAGTTATTAAGCAAACATCAAACAAAATTTGCAGATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGC</genome_strand>
        <mrna_strand>CGAAAT...............................................................................................GTCCTGGGAAGTGGAATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGATGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGATTCCTCAGAACCATTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E250899" ref_strand="+" ref_description="SGN-E250899 [cLEG-13-A2]">
      <seq>gtgcaaaaacctgtgtactaagtgggaagctatatgtctactatcctgatgatatgagaaatgtcggtgttgtttttaataatatctatgaattatgtggtttaatctctggcggacagtatcattcaatggattctctttcagacaatcagaagatatatgtggatactttagttaagaaggcgtatgacaactggatgcaagttgttgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcagaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="79391" stop="81980"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79690" g_stop="79844" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79845" i_stop="80651" i_length="807">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80652" g_stop="80889" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="393" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80890" i_stop="81487" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81488" g_stop="81680" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="586" r_length="193" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E250899" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E250899" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79690" e_stop="79844"/>
          <exon e_start="80652" e_stop="80889"/>
          <exon e_start="81488" e_stop="81680"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAGGTTTGTAATCTGTAATTATTTTCTCTCTTTTGTATAATTTGGTATTGTGGATTCATCTAGACATGCTTAAGGGAAAATGAAGAAGGAAGACATGGGGGCTATGGTTTCCCATGCTTACCCAACCATCTTTTACAATGGATTACCAAGAGCTTTTTTTTCTCCTATCTGTGGCGTTTTGTGAAGTGACTACTCTTCAAGAAGCAAAACACATTCATTTTCATGTTTGTCTCCTCCCAGATCACATCTAGAAGAGATTTACTAACAAAAGTCCCTCAGAACAAACTTTCCTGCTTGCTACAGTTCGAAAAAACTTTTTCTTAGAAATTTAGCTGTTTGTAACTTAGAGATATATCTGCCAAGTTCTTATGGGATATTATCCAGAAATTAGTTGCTGAAGCAATGAAATGCCTTTGATTTAGCTTCTCTGTTCTTTTTCTACCTTTTACAGGCAATAGTTAGAAGGATACAAACTGCTGATTCTGTAAAAATTGATTACAATGAAATTTCCGAAGGCAATGTTGTACCCTTCGAGTTGCTTTGTATATATAGAATATTCAACCCTTTTGACCATATCCAAACAATATTTACAACTAATTTTATTTGATACTGCTAGAATTGCCACACTAGTTAGATGCGGTTTGCACTTTCTCCTTTGTCCCTGTGACATTTCGATACTTCACATAATAGTGGTCAATGGAGTTGTGAGAGTTGCTATCATTTGCATAAATCGACCTTTTTTGGATGATAGTTCTTTTTTTCCCGAGTTTATGATGAAGTTATTAAGCAAACATCAAACAAAATTTGCAGATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGC</genome_strand>
        <mrna_strand>GTGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E255169" ref_strand="+" ref_description="SGN-E255169 [cLEG-31-A22]">
      <seq>atgcaaaaacctgtgtactaagtgggaagctatatgtctactatcctgatgatatgagaaatgtcggtgttgattttaataatatctatgaattatgtggtttaatctctggcggacagtatcattcaatggattctctttcagacaatcagaagatatatgtggatactttagttaagaaggcgtatgacaactggatgcaagttgttgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="79390" stop="81841"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79690" g_stop="79844" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79845" i_stop="80651" i_length="807">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80652" g_stop="80889" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="393" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80890" i_stop="81487" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81488" g_stop="81541" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="447" r_length="54" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E255169" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E255169" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79690" e_stop="79844"/>
          <exon e_start="80652" e_stop="80889"/>
          <exon e_start="81488" e_stop="81541"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAGGTTTGTAATCTGTAATTATTTTCTCTCTTTTGTATAATTTGGTATTGTGGATTCATCTAGACATGCTTAAGGGAAAATGAAGAAGGAAGACATGGGGGCTATGGTTTCCCATGCTTACCCAACCATCTTTTACAATGGATTACCAAGAGCTTTTTTTTCTCCTATCTGTGGCGTTTTGTGAAGTGACTACTCTTCAAGAAGCAAAACACATTCATTTTCATGTTTGTCTCCTCCCAGATCACATCTAGAAGAGATTTACTAACAAAAGTCCCTCAGAACAAACTTTCCTGCTTGCTACAGTTCGAAAAAACTTTTTCTTAGAAATTTAGCTGTTTGTAACTTAGAGATATATCTGCCAAGTTCTTATGGGATATTATCCAGAAATTAGTTGCTGAAGCAATGAAATGCCTTTGATTTAGCTTCTCTGTTCTTTTTCTACCTTTTACAGGCAATAGTTAGAAGGATACAAACTGCTGATTCTGTAAAAATTGATTACAATGAAATTTCCGAAGGCAATGTTGTACCCTTCGAGTTGCTTTGTATATATAGAATATTCAACCCTTTTGACCATATCCAAACAATATTTACAACTAATTTTATTTGATACTGCTAGAATTGCCACACTAGTTAGATGCGGTTTGCACTTTCTCCTTTGTCCCTGTGACATTTCGATACTTCACATAATAGTGGTCAATGGAGTTGTGAGAGTTGCTATCATTTGCATAAATCGACCTTTTTTGGATGATAGTTCTTTTTTTCCCGAGTTTATGATGAAGTTATTAAGCAAACATCAAACAAAATTTGCAGATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATC</genome_strand>
        <mrna_strand>ATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGATTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E344977" ref_strand="+" ref_description="SGN-E344977 [cTOF-22-M2]">
      <seq>tgtctactatcctgatgatatgagaaatgtcggtgttgtttttaataatatctatgaattatgtggtttaatctctggcggacagtatcattcaatggattctctttcagacaatcagaagatatatgtggatactttagttaagaaggcgtatgacaactggatgcaagttgttgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcagaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgctgctagcacgcctaatccttataagggagctgaggacttcttaacagaggaagagatacgtatgaaaagtcatgagatgctcgaaaatgaagacatgcaacatttgctacgtatgttcagcatgggacagggtcatgcgtcttctagtgttgcagaagagattaccagtatggatcagcatacatgcccagcatgtcttctaattttggttttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="79424" stop="82197"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79724" g_stop="79844" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79845" i_stop="80651" i_length="807">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.928" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80652" g_stop="80889" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="359" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80890" i_stop="81487" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="81488" g_stop="81897" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="360" r_stop="768" r_length="409" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E344977" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>769</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344977" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79724" e_stop="79844"/>
          <exon e_start="80652" e_stop="80889"/>
          <exon e_start="81488" e_stop="81897"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAGGTTTGTAATCTGTAATTATTTTCTCTCTTTTGTATAATTTGGTATTGTGGATTCATCTAGACATGCTTAAGGGAAAATGAAGAAGGAAGACATGGGGGCTATGGTTTCCCATGCTTACCCAACCATCTTTTACAATGGATTACCAAGAGCTTTTTTTTCTCCTATCTGTGGCGTTTTGTGAAGTGACTACTCTTCAAGAAGCAAAACACATTCATTTTCATGTTTGTCTCCTCCCAGATCACATCTAGAAGAGATTTACTAACAAAAGTCCCTCAGAACAAACTTTCCTGCTTGCTACAGTTCGAAAAAACTTTTTCTTAGAAATTTAGCTGTTTGTAACTTAGAGATATATCTGCCAAGTTCTTATGGGATATTATCCAGAAATTAGTTGCTGAAGCAATGAAATGCCTTTGATTTAGCTTCTCTGTTCTTTTTCTACCTTTTACAGGCAATAGTTAGAAGGATACAAACTGCTGATTCTGTAAAAATTGATTACAATGAAATTTCCGAAGGCAATGTTGTACCCTTCGAGTTGCTTTGTATATATAGAATATTCAACCCTTTTGACCATATCCAAACAATATTTACAACTAATTTTATTTGATACTGCTAGAATTGCCACACTAGTTAGATGCGGTTTGCACTTTCTCCTTTGTCCCTGTGACATTTCGATACTTCACATAATAGTGGTCAATGGAGTTGTGAGAGTTGCTATCATTTGCATAAATCGACCTTTTTTGGATGATAGTTCTTTTTTTCCCGAGTTTATGATGAAGTTATTAAGCAAACATCAAACAAAATTTGCAGATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGAT</genome_strand>
        <mrna_strand>TGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAG-ATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E262765" ref_strand="+" ref_description="SGN-E262765 [cLEG-63-B20]">
      <seq>gcaagttgttgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcagaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgctgctagcacgcctaatccttataagggagctgaggacttcttaacagaggaagagatacgtatgaaaagtcatgagatgctcgaaaatgaagacatgcaacatttgctacgtatgttcagcatgggacagggtcatgcgtcttctagtggtgcagaagagaataccagtatggatcagcatacatgcccagcatgtcttctaaattttggttttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="80396" stop="82197"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80696" g_stop="80889" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="194" r_length="194" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80890" i_stop="81487" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81488" g_stop="81897" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="604" r_length="410" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E262765" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E262765" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80696" e_stop="80889"/>
          <exon e_start="81488" e_stop="81897"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCT-AATTTTGGTTTTGAT</genome_strand>
        <mrna_strand>GCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGGTGCAGAAGAGAA-TACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAAATTTTGGTTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E256298" ref_strand="+" ref_description="SGN-E256298 [cLEG-37-P16]">
      <seq>gcaagttgttgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcagaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgctgctagcacgcctaatccttataagggagctgaggacttcttaacagaggaagagatacgtatgaaaagtcatgagatgctcgaaaatgaagacatgcaacatttgctacgtatgttcagcatgggacagggtcatgcgtcttctagtgttgcagaagagaattaccagtatggatcagcatacatgcccagcatgtcttctaattttggttttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="80396" stop="82197"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80696" g_stop="80889" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="194" r_length="194" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80890" i_stop="81487" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81488" g_stop="81897" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="604" r_length="410" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E256298" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256298" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80696" e_stop="80889"/>
          <exon e_start="81488" e_stop="81897"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGAT</genome_strand>
        <mrna_strand>GCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E264681" ref_strand="+" ref_description="SGN-E264681 [cLEG-72-E23]">
      <seq>tgagtatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctcttttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcagaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgctgctagcacgcctaatccttataagggagctgaggacttcttaacagaggaagagatacgtatgaaaagtcatgagatgctcgaaaatgaagacatgcaacatttgctacgtatgttcagcatgggacagggtcatgcgtcttctagtgttgcagaagagaattaccagtatggatcagcatacatgcccagcatgcttctaattttgggtttgatgaggaacgtcacgttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="80405" stop="82214"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80705" g_stop="80889" g_length="185"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="185" r_length="185" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80890" i_stop="81487" i_length="598">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81488" g_stop="81914" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="186" r_stop="610" r_length="425" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E264681" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264681" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80705" e_stop="80889"/>
          <exon e_start="81488" e_stop="81914"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGATGAGGAACGTACACGTTC</genome_strand>
        <mrna_strand>TGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATG-CTTCTAATTTTGGGTTTGATGAGGAACGT-CACGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E252060" ref_strand="+" ref_description="SGN-E252060 [cLEG-8-N15]">
      <seq>tatgatggaaaatctctcctaagcctgggccagaataaagccgcagtttcgtctcaaaatgatcctacaattggctctcagaaccatacaatctctgttgatcaacaaactaatctaccaagtcttccagcttcaatatcatcagagcagccttctatgaattcatgactgaacatgggagggtataatgatagcctcagcggcagatacactatgcagcctcggaacatgaatctaaatggcaacatgcagttaaatggtgcttcgcttcctcagaaccatttgctcggcacgtcacaacaagctcagacgcatgggagtgatatcatgctggcccttcgcccacccccaacagccatgaatgtctagctattttgctgctagcacgcctaatccttataagggagctgaggacttcttaacagaggaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="80409" stop="81991"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80709" g_stop="80889" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80890" i_stop="81487" i_length="598">
            <donor d_prob="0.968" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81488" g_stop="81733" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="431" r_length="250" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E252060" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E252060" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80709" e_stop="80889"/>
          <exon e_start="81488" e_stop="81733"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCA---CCA-CAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAG</genome_strand>
        <mrna_strand>TATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTGTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCATGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGCGGCAGATACACTATGCAGCCTCGGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGCTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGACGCATGGGAGTGATATCATGCTGGCCCTTCGCCCACCCCCAACAGCCATGAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E709353" ref_strand="+" ref_description="SGN-E709353 [FA51CD07]">
      <seq>gccttctatgaattcaggactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcacaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgctgctaccacgcctaatccttataagggagctgaggactctcttaacagaggaagagatacgtatgaaaagtcatgagatgctccaaaatgaagacatgcaacatttgctacgtatgttcagccactgggacagggtcatgcgtcttctattgttgcacaagagaattaccactatggatcaaccatacatgcccagcatgtcttctaattttggctttgatgaggaacgtacacgttcttcaggcaaggctgttgtagggtggctcaacctcaaagctgccttgagatggggcattttcataaggaagaaagctgcacaaagaacagcaccaattactgacctggatgactcttaccatttgactttcccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="80558" stop="82331"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80858" g_stop="80889" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80890" i_stop="81487" i_length="598">
            <donor d_prob="0.968" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81488" g_stop="82046" g_length="559"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="596" r_length="564" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E709353" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E709353" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80858" e_stop="80889"/>
          <exon e_start="81488" e_stop="82046"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTTCTATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACT-TCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAG-CA-TGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATC-AGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGATGAGGAACGTACACGTTCTTCAGGTAAGGCTGTTGTAGGGTGGCTCAAACTCAAAGCTGCCTTGAGATGGGGCATTTTCATAAGGAAGAAAGCTGCAGAAAGAAGAGCACAAATTACTGAACTGGATGACTCTTA-GATTTGATTTTCCCC</genome_strand>
        <mrna_strand>GCCTTCTATGAATTCAGGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCACAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTACCACGCCTAATCCTTATAAGGGAGCTGAGGACTCTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCCAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCCACTGGGACAGGGTCATGCGTCTTCTATTGTTGCACAAGAGAATTACCACTATGGATCAACCATACATGCCCAGCATGTCTTCTAATTTTGGCTTTGATGAGGAACGTACACGTTCTTCAGGCAAGGCTGTTGTAGGGTGGCTCAACCTCAAAGCTGCCTTGAGATGGGGCATTTTCATAAGGAAGAAAGCTGCACAAAGAACAGCACCAATTACTGACCTGGATGACTCTTACCATTTGACTTTCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E204052" ref_strand="+" ref_description="SGN-E204052 [cLEC-22-M2]">
      <seq>atgaattcatgactgaacatgggagggtataatgatagcctcagtggcagatacactatgcagcctcagaacatgaatctaaatggcaacatgcagttaaatggtgcttcgtttcctcagaaccatttgctcggcacgtcacaacaagctcagccgcatgggagtgatagcatgctggcccttcgcccaccacagccatcaatgtctagctattttgctgctagcacgcctaatccttataagggagctgaggacttcttaacagaggaagagatacgtatgaaaagtcatgagatgctcaaaaatgaagacatgcaacatttgctacgtatgttcagcatgggacagggtcatgcgtcttctagtgttgcagaagagaattaccagtatggatcagcatacatgcccagcatgtcttctaatttcggttttgatgaggaacgtacacgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="80565" stop="82213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="80865" g_stop="80889" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="80890" i_stop="81487" i_length="598">
            <donor d_prob="0.968" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="81488" g_stop="81913" g_length="426"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="451" r_length="426" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E204052" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>451</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E204052" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="80865" e_stop="80889"/>
          <exon e_start="81488" e_stop="81913"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAATTCAGGACTGAACATGGGAGGTATAAATATGTCTTGGTGCCTAAGATATGTTCCTGCTAAAGTGTGAATTTTGCCCTCTCTGCTTTTACTGCTGTTTGGGACGGTTTCTGGGTGATTGGAACAAGAATTCTTCACAAAGATACATTCTTCATGAACTGTGTTGGATTCTGCTCACTCCTCTTTTTGCAGTTTTGGCTTCTTGGTGTGATTTCTTGTTGATTGGAATATAATTCCTCACTATAATAGTGTCTTAACAAGTTTCCAAAGTGAAAAAAGCATAAACACAAGCAGTGTCTGTCAGCGTCAAGCGTTGGATATACTATGACATGTTCCTTTTGTTCTTGAATTTGATACCAGCAAGGTCGTTTTTCCAAATCTTTTTGATATTTCTGTAAATAAAGTAATGTATATCTTGGCAAATTTTTTCGCACAGAAGTAGGTCTCTCAACCTGCATTGTTTACTGCTTTGCATGACGTGAAGGATACCTAGTATAAGGCTTAAAACCTGCAATTACCTGTTTAGTGAGCAGTTGACCATTATACTATGACCTCATTGGTTTGTTGGATTGTTATAAGTTCTTATTTGTAACTTTCAATGAGATATCTTTCTGTTACCAGGGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGATGAGGAACGTACACGTT</genome_strand>
        <mrna_strand>ATGAATTCATGACTGAACATGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCAAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTCGGTTTTGATGAGGAACGTACACGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E469158" ref_strand="+" ref_description="SGN-E469158 [cSTB-10-L19]">
      <seq>acactatgcagcctcagaacatgaatctaaatggcaacatgcatttaaatggtgcttcgtttcctcagaaccatttgctaggcacgtcacaacaagctcagctgcatgggagtgacagcatgctggcccttcgcccaccacagccatcaatgtctagctattttactgctagcacgcctaatccttataaaggagctgaggacttcttaacagaggaagagatacgtatgaaaagtcatgagatgctcgaaaatgaagacatgcaacatctactacgtatgttcaacatgggacagggtcatgcgtcttctagtgttgcagaagagaattaccaatatggatcagcatacatgcctaacacgtcttctacttttggttttgatgaggaacgtacacgttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="81215" stop="82215"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81515" g_stop="81915" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="401" r_length="401" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E469158" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E469158" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81515" e_stop="81915"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGATGAGGAACGTACACGTTCT</genome_strand>
        <mrna_strand>ACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCATTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTAGGCACGTCACAACAAGCTCAGCTGCATGGGAGTGACAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTACTGCTAGCACGCCTAATCCTTATAAAGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATCTACTACGTATGTTCAACATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAATATGGATCAGCATACATGCCTAACACGTCTTCTACTTTTGGTTTTGATGAGGAACGTACACGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E469154" ref_strand="+" ref_description="SGN-E469154 [cSTB-10-L9]">
      <seq>acactatgcagcctcagaacatgaatctagatggcgacatgcgtttaaatggtgcttcaattcctcagaaccatttgctaggcacgtcacaacaagctcagctgcatgggagtgacagcatgctggcccttggcccaccacaaccatcaatgtctagctattttactgctagcacgcctaatccttataaaggagctgaggacttcttaacagaggaagagatacctatgaaaagtcatgagatgctcgaaaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="81215" stop="82070"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81515" g_stop="81770" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="256" r_length="256" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E469154" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>256</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E469154" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81515" e_stop="81770"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGA</genome_strand>
        <mrna_strand>ACACTATGCAGCCTCAGAACATGAATCTAGATGGCGACATGCGTTTAAATGGTGCTTCAATTCCTCAGAACCATTTGCTAGGCACGTCACAACAAGCTCAGCTGCATGGGAGTGACAGCATGCTGGCCCTTGGCCCACCACAACCATCAATGTCTAGCTATTTTACTGCTAGCACGCCTAATCCTTATAAAGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACCTATGAAAAGTCATGAGATGCTCGAAAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E573806" ref_strand="+" ref_description="SGN-E573806 [33174]">
      <seq>tttttttttttttcaaagttaaacgaaacacaattatacattcaatataacaaatttttgaaggtccaccacatcacattttgatgatatgttcacaacaaatgtttctatgaggcaaatattatgttttcttttgataaactcattacaacaaaacactaaaaactacagcatcagtcaacataaacataaaaacatacttgctacaatcttgagttagcacaaggcaaatgaagtcacttccatccgtcgctagtagtagaaatcaggtctaaaccatgggaatttcccttcagctagagccatgaaaactgctcgtctttgaactgcatataatatgctgagaagactatcataagcttatgttattctgttaatggagagagcaatctccatggacaggcataactgtacattataagaggctcctagcttcagattgagcccaaaccagcaccagatgcatatggattgtcaaaccaaactccaagagcaataatacgcttcttagaggaaagcccttacacatcatatccaagtggttgctaaggggaaaatcaaatctaagagtcatccagctcagtaatttgtgctcttctttcagcagctttcttcctgatgaaataccccatctcaaggcagctttgagtttgagcaacctaaanagccttactgaagaacgtgtacgttcctcatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="82892" stop="81594"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82601" g_stop="81894" g_length="708"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="698" r_length="698" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E573806" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="1.014" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573806" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82601" e_stop="81894"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCTCAAATATTCAAAGTAATAAGAAACAAGATTATTCGTTCAATATAACAAATTTTTGAAGGTTTACCACATCACATTTTAATGATATGTTCACAACAAATGTTTCTATGAGACAAATATTATGTTTTCTTTTGATAAACTCATTACAACAAAACACTAAAAATTACAGCATCAGTCAAACATAACTCATCAAAACATACTTGCTACAATCTTGAGTTAGCACAAGGCAAATGAAGTCACTTCCTTCAGTCCCTAGTAGAAGAAATCAGGTCTAAACCATGGGAATTTCCCTTCAGCTAGAGCCATGAAAACTGCTCCAGTCTTTGAACTGCATATAATATGCTGAGAGAACTATCATAAGCTTATGTTATTCTGTTAATGGAGAGAGAGCAATCTCCATGGACAGGCATAACTGTACATTATAAGAGGCTCCTAGGTTCAGATTGAGCCCAACCCAGCACCAGATGCATATGGATTGTCAAACCAAATTCCAAGATCGATAATATGCTTCTTAGAGGAAAGCCCTTACACATCATATCCAAGTGGTTGCTAAGGGGAAAATCAAATCTAAGAGTCATCCAGTTCAGTAATTTGTGCTCTTCTTTCTGCAGCTTTCTTCCTTATGAAAATGCCCCATCTCAAGGCAGCTTTGAGTTTGAGCCACCCTACAACAGCCTTACCTGAAGAACGTGTACGTTCCTCATCA</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTCAAAGTTAAACGAAACACAATTATACATTCAATATAACAAATTTTTGAAGGTCCACCACATCACATTTTGATGATATGTTCACAACAAATGTTTCTATGAGGCAAATATTATGTTTTCTTTTGATAAACTCATTACAACAAAACACTAAAAACTACAGCATCAGTC-AACATAA-ACATAAAAACATACTTGCTACAATCTTGAGTTAGCACAAGGCAAATGAAGTCACTTCCATCCGTCGCTAGTAGTAGAAATCAGGTCTAAACCATGGGAATTTCCCTTCAGCTAGAGCCATGAAAACTGCT-C-GTCTTTGAACTGCATATAATATGCTGAGAAGACTATCATAAGCTTATGTTATTCTGTTAAT-G-GAGAGAGCAATCTCCATGGACAGGCATAACTGTACATTATAAGAGGCTCCTAGCTTCAGATTGAGCCCAAACCAGCACCAGATGCATATGGATTGTCAAACCAAACTCCAAGAGCAATAATACGCTTCTTAGAGGAAAGCCCTTACACATCATATCCAAGTGGTTGCTAAGGGGAAAATCAAATCTAAGAGTCATCCAGCTCAGTAATTTGTGCTCTTCTTTCAGCAGCTTTCTTCCTGATG-AAATACCCCATCTCAAGGCAGCTTTGAGTTTGAG-CAACCTA-AANAGCCTTA-CTGAAGAACGTGTACGTTCCTCATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E429900" ref_strand="+" ref_description="SGN-E429900 [STM-52-F24]">
      <seq>ataacaaatttttgaaggtccaccacatcacattttgatgatatgttcacaacaaatgtttctatgagtcaaatattatgttttcttttgataaactcattacaacaaaacacaaaaaattacagcatcagtcaacataaacataaaaacatacttgctacaatcttgagttagcacaaggcaaatgaagtcacttccatccgtccctagtagcagaaatcaggtctaaaccagggaatttcccttcagcaagggacatgaaaactgcttgtctttgaactgcatataatatgctgagaaaactatcataagcttatgttattctgttaatggagagagagcaatctccatggacaggcataactgtacattataagaggctcctaggttcagattgagcccaacccagcaccagatgcatatggattgtcaaaccaaatttcaagagcgataatatgcttcttagaggaaagcccttacacatcatatccaagtggttgctaaggggaaaatcaaatctaagagtcatccagttcagtaatttgtgctcttctttcggcagctttcttcctgatgaaaatgccccatctcaaggcagctttgagtttgagccaccctacaacagccttacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="82855" stop="81618"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82555" g_stop="81918" g_length="638"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="633" r_length="633" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E429900" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E429900" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82555" e_stop="81918"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAACAAATTTTTGAAGGTTTACCACATCACATTTTAATGATATGTTCACAACAAATGTTTCTATGAGACAAATATTATGTTTTCTTTTGATAAACTCATTACAACAAAACACTAAAAATTACAGCATCAGTCAAACATAACTCATCAAAACATACTTGCTACAATCTTGAGTTAGCACAAGGCAAATGAAGTCACTTCCTTCAGTCCCTAGTAGAAGAAATCAGGTCTAAACCATGGGAATTTCCCTTCAGCTAGAGCCATGAAAACTGCTCCAGTCTTTGAACTGCATATAATATGCTGAGAGAACTATCATAAGCTTATGTTATTCTGTTAATGGAGAGAGAGCAATCTCCATGGACAGGCATAACTGTACATTATAAGAGGCTCCTAGGTTCAGATTGAGCCCAACCCAGCACCAGATGCATATGGATTGTCAAACCAAATTCCAAGATCGATAATATGCTTCTTAGAGGAAAGCCCTTACACATCATATCCAAGTGGTTGCTAAGGGGAAAATCAAATCTAAGAGTCATCCAGTTCAGTAATTTGTGCTCTTCTTTCTGCAGCTTTCTTCCTTATGAAAATGCCCCATCTCAAGGCAGCTTTGAGTTTGAGCCACCCTACAACAGCCTTACCT</genome_strand>
        <mrna_strand>ATAACAAATTTTTGAAGGTCCACCACATCACATTTTGATGATATGTTCACAACAAATGTTTCTATGAGTCAAATATTATGTTTTCTTTTGATAAACTCATTACAACAAAACACAAAAAATTACAGCATCAGTC-AACATAA-ACATAAAAACATACTTGCTACAATCTTGAGTTAGCACAAGGCAAATGAAGTCACTTCCATCCGTCCCTAGTAGCAGAAATCAGGTCTAAACCA-GGGAATTTCCCTTCAGCAAGGGACATGAAAACTGCT--TGTCTTTGAACTGCATATAATATGCTGAGAAAACTATCATAAGCTTATGTTATTCTGTTAATGGAGAGAGAGCAATCTCCATGGACAGGCATAACTGTACATTATAAGAGGCTCCTAGGTTCAGATTGAGCCCAACCCAGCACCAGATGCATATGGATTGTCAAACCAAATTTCAAGAGCGATAATATGCTTCTTAGAGGAAAGCCCTTACACATCATATCCAAGTGGTTGCTAAGGGGAAAATCAAATCTAAGAGTCATCCAGTTCAGTAATTTGTGCTCTTCTTTCGGCAGCTTTCTTCCTGATGAAAATGCCCCATCTCAAGGCAGCTTTGAGTTTGAGCCACCCTACAACAGCCTTACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E549124" ref_strand="+" ref_description="SGN-E549124 [TUS-67-I10](-)">
      <seq>gcatattatcgatcttggaatttggtttgacaatccatatgcatctggtgctgggttgggctcaatctgaacctaggagcctcttataatgtacagttatgcctgtccatggagattgctctctctccattaacagaataacataagcttatgatagttctctcagcatattatatgcagttcaaagactggagcagttttcatggctctagctgaagggaaattcccatggtttagacctgatttcttctactagggactgaaggaagtgacttcatttgccttgtgctaactcaagattgtagcaagtatgttttgatgagttatgtttgactgatgctgtaatttttagtgttttgttgtaatgagtttatcaaaagaaaacataatatttgtctcatagaaacatttgttgtgaacatatcattaaaatgtgatgtggtaaaccttcaanaaatttgttatatgaacgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="81792" stop="82868"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82092" g_stop="82574" g_length="483"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="483" r_length="483" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E549124" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E549124" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82092" e_stop="82574"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATATTATCGATCTTGGAATTTGGTTTGACAATCCATATGCATCTGGTGCTGGGTTGGGCTCAATCTGAACCTAGGAGCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGATTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTCATAGAAACATTTGTTGTGAACATATCATTAAAATGTGATGTGGTAAACCTTCAA-AAATTTGTTATATTGAACGAATAATCTTGT</genome_strand>
        <mrna_strand>GCATATTATCGATCTTGGAATTTGGTTTGACAATCCATATGCATCTGGTGCTGGGTTGGGCTCAATCTGAACCTAGGAGCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGATTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTCATAGAAACATTTGTTGTGAACATATCATTAAAATGTGATGTGGTAAACCTTCAANAAATTTGTTATA-TGAACGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E544935" ref_strand="+" ref_description="SGN-E544935 [TUS-67-I10]">
      <seq>gcatattatcgatcttggaatttggtttgacaatccatatgcatctggtgctgggttgggctcaatctgaacctaggagcctcttataatgtacagttatgcctgtccatggagattgctctctctccattaacagaataacataagcttatgatagttctctcagcatattatatgcagttcaaagactggagcagttttcatggctctagctgaagggaaattcccatggtttagacctgatttcttctactagggactgaaggaagtgacttcatttgccttgtgctaactcaagattgtagcaagtatgttttgatgagttatgtttgactgatgctgtaatttttagtgttttgttgtaatgagtttatcaaaagaaaacataatatttgtctcatagaaacatttgttgtgaacatatcattaaaatgtgatgtggtaaaccttcaaaaatttgttatattgaacgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="81792" stop="82868"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82092" g_stop="82574" g_length="483"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="483" r_length="483" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E544935" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E544935" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82092" e_stop="82574"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATATTATCGATCTTGGAATTTGGTTTGACAATCCATATGCATCTGGTGCTGGGTTGGGCTCAATCTGAACCTAGGAGCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGATTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTCATAGAAACATTTGTTGTGAACATATCATTAAAATGTGATGTGGTAAACCTTCAAAAATTTGTTATATTGAACGAATAATCTTGT</genome_strand>
        <mrna_strand>GCATATTATCGATCTTGGAATTTGGTTTGACAATCCATATGCATCTGGTGCTGGGTTGGGCTCAATCTGAACCTAGGAGCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGATTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTCATAGAAACATTTGTTGTGAACATATCATTAAAATGTGATGTGGTAAACCTTCAAAAATTTGTTATATTGAACGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E309425" ref_strand="+" ref_description="SGN-E309425 [cLEY-22-N12]">
      <seq>atcgatcttggaatttggtttgaccaatcacatgccatctggtgcctgggttgggctcaatctgaacctaggagccctcttataatgtacagttatgcctgtccatggagacttgctctctctccattaacagaataacataagcttatgatagttctctcagcatattatatgcagttcaaagactggagcagttttcatggctctagctgaagggaaattcccatggtttagacctgatttcttctactagggactgaaggaagtgacttcatttgccttgtgctaactcaagattgtagcaagtatgttttgatgagttatgtttgactgatgctgtaatttttagtgttttgttgtaatgagtttatcaaaagaaaacataatatttgtctcatagaaacatnttgttgtgaacatatcattaaaatgtgaatgtggtaaaccttcaaaaatttgttatattgaacgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="81799" stop="82868"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="82099" g_stop="82574" g_length="476"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="482" r_length="482" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E309425" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>476</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E309425" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="82099" e_stop="82574"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGATCTTGGAATTTGGTTTGACAATCCATATG-CATCTGGTG-CTGGGTTGGGCTCAATCTGAACCTAGGAG-CCTCTTATAATGTACAGTTATGCCTGTCCATGGAGA-TTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTCATAGAAACAT-TTGTTGTGAACATATCATTAAAATGTG-ATGTGGTAAACCTTCAAAAATTTGTTATATTGAACGAATAATCTTGT</genome_strand>
        <mrna_strand>ATCGATCTTGGAATTTGGTTTGACCAATCACATGCCATCTGGTGCCTGGGTTGGGCTCAATCTGAACCTAGGAGCCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGACTTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTCATAGAAACATNTTGTTGTGAACATATCATTAAAATGTGAATGTGGTAAACCTTCAAAAATTTGTTATATTGAACGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E690702" ref_strand="+" ref_description="SGN-E690702 [LH_Ea04D04]">
      <seq>cgtaaagggccttggacgtgatttgagcaaaggggacagctttaaagatcccatagaagcggccctcttatgtattcctgatggatatcactgcattgatctctcgctttataaagagggtcaaattgttttactattaaacgaaactgcaaccacttctgagatttctggaaatgctttcatgatgattctacaagctggtgatctttcatttgtatctctttcaagatctaccgcccccaattcttggaagcttcacgaacttcaggattctgctatatacctgcaactggagagtgaaaaggttcgaagcattcctcattctgtggtctctcccttggcagttagtgcatcaagaggtgtagcttgtgtttttgctgcaagaaagcgtgctttggtttacatcttggacgaagatgaagatgaagtttctgatacagagtgacagtaccttgctgttcgctgggtcttttgcaggatctatcaattttgggtagataaagccagtgcctatccctttttactaaattgtagactctttgtacacttctagttaatagttattagttggatgatgttaaagctgaagaatcaacaaaattctacttcacattgaaaaatgaaaatatatttaatttgaaannaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="84504" stop="82517"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84205" g_stop="84091" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="0.896"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84090" i_stop="83998" i_length="93">
            <donor d_prob="0.980" d_score="0.98"/>
            <acceptor a_prob="0.783" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83997" g_stop="83845" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="268" r_length="153" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83844" i_stop="83624" i_length="221">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83623" g_stop="83542" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="350" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="83541" i_stop="83093" i_length="449">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.683" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83092" g_stop="82831" g_length="262"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="613" r_length="263" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="645" polyA_stop="668"/>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E690702" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E690702" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84205" e_stop="84091"/>
          <exon e_start="83997" e_stop="83845"/>
          <exon e_start="83623" e_stop="83542"/>
          <exon e_start="83092" e_stop="82831"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCAGGGGCCTTGCACGTGATTTGAGCAAAGTGGACAGTATACGTGATCCCATAGAAGCGGCCCTCTTATGTATTCCTGATGGATATCACTGTATTGATCTCTCGCTTTATAAAGTAAGTGGAAAATTCCCACCTGATGTTAATTTTCTATAACCTACAGCTTTCTAACCCTTGAACTGCTATTTAACATTTCATCATTCAAAGCAGGAGGGTCAAATTGTTTTACTATTAAACGAAACTGCAACCACTTCGGAGAGCTCTGGAAATGCTTTCATGATGATTCTACAAGCTGGTGACCTTTCATTTGTATCTCTTTCAAGATCTACCGCCCCCAATTCTTGGAAGCTTCACGAACTTCAGGTATATGACATCATTACTCTACCAGGAAATAATCTGCGTAAATTTCTCTTGGAAATTCTGTATCCAATGACATGCATTCTAGTTTGTTATGTTGGACGGATTGTCCATTGCGTCACTGAGTTTGAAATAGATGAAGGTGTATATACACGTGCTACATGGTTTGTTATTCTGAAGTCTGAACGTCAGAAACTAATTGACCTTTTTATCTGCATGATATCTAGGATTCTGCTATATACCTGCAACTGGAGAGTGAAAAGGTTCGAAGCATTCCTCATTCTGTGGTCTCTCCCTTGGCAGTTAGTGGTGAGTGGTTATATTTGTACTTTTTTGGGTGCCAACTGTTGTTAGTATCTATAGGAAAAGAGGCTAACACATTCATGAGAACTAACCAAGAACCTAAAATGTTTAATCGCTTGATACCAAAAATGAATACATCTGAACACCATTGTTCCTACTCATTTGAAGGCCGAAACACCTATTTCTTTGTCGATTAGAACTTCAGTTTCAAGCTAAGCTAAGCTAATGGTATTTAGAGAATCTAAAATCTTTATCTCCCCCCCACCCCCGGGATAGCTAATAGAGCCAGTGTGAATTTGAAATGCACTTAAAACTAGAATCCCGTAATGACAGATGGAATTTCATCCAAATACACATGATATTGTTGTTAACAGTTTTCTTGTAATATGGATGACTAATGCTAGACACTTACTTACCAAGAGATTTGACATTTTCAATATGATTTTCTCTATCAGCATCAAGAGGTGTAGCTTGTGTTTTTGCTGCAAGAAAGCGTGCTTTGGTTTACATCTTGGACGAAGATGAAGATGAAGTTTCTGATACAGAGTGACAGTACCTTGCTGTTCGCTGGGTCTTTTGCAGGATCTATCAATTTTGGGCAGAT-AAGCCAGTGTCTATCCCTTTTTACTAAATTGTAGACTCTTTGTACACTTCTAGTTAATAGTTATTAGTTGGATGATGTTAAAGCTGAAGAATCAACAAAATTCTACTTCACAT</genome_strand>
        <mrna_strand>CGTAAAGGGCCTTGGACGTGATTTGAGCAAAGGGGACAGCTTTAAAGATCCCATAGAAGCGGCCCTCTTATGTATTCCTGATGGATATCACTGCATTGATCTCTCGCTTTATAAA.............................................................................................GAGGGTCAAATTGTTTTACTATTAAACGAAACTGCAACCACTTCTGAGATTTCTGGAAATGCTTTCATGATGATTCTACAAGCTGGTGATCTTTCATTTGTATCTCTTTCAAGATCTACCGCCCCCAATTCTTGGAAGCTTCACGAACTTCAG.............................................................................................................................................................................................................................GATTCTGCTATATACCTGCAACTGGAGAGTGAAAAGGTTCGAAGCATTCCTCATTCTGTGGTCTCTCCCTTGGCAGTTAGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAGAGGTGTAGCTTGTGTTTTTGCTGCAAGAAAGCGTGCTTTGGTTTACATCTTGGACGAAGATGAAGATGAAGTTTCTGATACAGAGTGACAGTACCTTGCTGTTCGCTGGGTCTTTTGCAGGATCTATCAATTTTGGGTAGATAAAGCCAGTGCCTATCCCTTTTTACTAAATTGTAGACTCTTTGTACACTTCTAGTTAATAGTTATTAGTTGGATGATGTTAAAGCTGAAGAATCAACAAAATTCTACTTCACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E694542" ref_strand="+" ref_description="SGN-E694542 [LH_Ea04D04](-)">
      <seq>caggggccttgcacgtgatttgagcaaagtggacagtatacgtgatcccatagaagcggcccttttatgtattcctgatggatatcactgcattgatttttcgctttataaagagggtcaaattgtttttctattaaacgaaactgcaaccacttttgagatttttggaaatgctttcatgatgattttacaagctggggatttttcatttgtatttttttcaagatttaccgcccccaatttttggaagcttcacgaacttcaggattttgctatatacctgcaactggagagtgaaaaggtttgaagcattcctcattttgtggtttttcccttggcagttagtgcatcaagaggggtagtttgtgtttttgctgcaagaaagggtgctttggtttacattttggacgaagatgaagatgaagtttttgatacagagtgacagtaccttgttgtttgctgggttttttgcaggatttatcaattttgggtagataaagccagtgcctatccctttttagtaaattgtagactttttgtacccttttagttaatagttattagttggatgatgttaaaagggaagaatcaacaaaattttacttcccctgnaacataaaaaatatattttatttgcaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="84502" stop="82531"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84202" g_stop="84091" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84090" i_stop="83998" i_length="93">
            <donor d_prob="0.980" d_score="0.92"/>
            <acceptor a_prob="0.783" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83997" g_stop="83845" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="265" r_length="153" r_score="0.908"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83844" i_stop="83624" i_length="221">
            <donor d_prob="0.988" d_score="0.92"/>
            <acceptor a_prob="0.929" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83623" g_stop="83542" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="347" r_length="82" r_score="0.939"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="83541" i_stop="83093" i_length="449">
            <donor d_prob="0.975" d_score="0.92"/>
            <acceptor a_prob="0.683" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="83092" g_stop="82833" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="608" r_length="261" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="638" polyA_stop="665"/>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E694542" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="0.913" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E694542" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84202" e_stop="84091"/>
          <exon e_start="83997" e_stop="83845"/>
          <exon e_start="83623" e_stop="83542"/>
          <exon e_start="83092" e_stop="82833"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGGGCCTTGCACGTGATTTGAGCAAAGTGGACAGTATACGTGATCCCATAGAAGCGGCCCTCTTATGTATTCCTGATGGATATCACTGTATTGATCTCTCGCTTTATAAAGTAAGTGGAAAATTCCCACCTGATGTTAATTTTCTATAACCTACAGCTTTCTAACCCTTGAACTGCTATTTAACATTTCATCATTCAAAGCAGGAGGGTCAAATTGTTTTACTATTAAACGAAACTGCAACCACTTCGGAGAGCTCTGGAAATGCTTTCATGATGATTCTACAAGCTGGTGACCTTTCATTTGTATCTCTTTCAAGATCTACCGCCCCCAATTCTTGGAAGCTTCACGAACTTCAGGTATATGACATCATTACTCTACCAGGAAATAATCTGCGTAAATTTCTCTTGGAAATTCTGTATCCAATGACATGCATTCTAGTTTGTTATGTTGGACGGATTGTCCATTGCGTCACTGAGTTTGAAATAGATGAAGGTGTATATACACGTGCTACATGGTTTGTTATTCTGAAGTCTGAACGTCAGAAACTAATTGACCTTTTTATCTGCATGATATCTAGGATTCTGCTATATACCTGCAACTGGAGAGTGAAAAGGTTCGAAGCATTCCTCATTCTGTGGTCTCTCCCTTGGCAGTTAGTGGTGAGTGGTTATATTTGTACTTTTTTGGGTGCCAACTGTTGTTAGTATCTATAGGAAAAGAGGCTAACACATTCATGAGAACTAACCAAGAACCTAAAATGTTTAATCGCTTGATACCAAAAATGAATACATCTGAACACCATTGTTCCTACTCATTTGAAGGCCGAAACACCTATTTCTTTGTCGATTAGAACTTCAGTTTCAAGCTAAGCTAAGCTAATGGTATTTAGAGAATCTAAAATCTTTATCTCCCCCCCACCCCCGGGATAGCTAATAGAGCCAGTGTGAATTTGAAATGCACTTAAAACTAGAATCCCGTAATGACAGATGGAATTTCATCCAAATACACATGATATTGTTGTTAACAGTTTTCTTGTAATATGGATGACTAATGCTAGACACTTACTTACCAAGAGATTTGACATTTTCAATATGATTTTCTCTATCAGCATCAAGAGGTGTAGCTTGTGTTTTTGCTGCAAGAAAGCGTGCTTTGGTTTACATCTTGGACGAAGATGAAGATGAAGTTTCTGATACAGAGTGACAGTACCTTGCTGTTCGCTGGGTCTTTTGCAGGATCTATCAATTTTGGGCAGAT-AAGCCAGTGTCTATCCCTTTTTACTAAATTGTAGACTCTTTGTACACTTCTAGTTAATAGTTATTAGTTGGATGATGTTAAAGCTGAAGAATCAACAAAATTCTACTTCAC</genome_strand>
        <mrna_strand>CAGGGGCCTTGCACGTGATTTGAGCAAAGTGGACAGTATACGTGATCCCATAGAAGCGGCCCTTTTATGTATTCCTGATGGATATCACTGCATTGATTTTTCGCTTTATAAA.............................................................................................GAGGGTCAAATTGTTTTTCTATTAAACGAAACTGCAACCACTTTTGAGATTTTTGGAAATGCTTTCATGATGATTTTACAAGCTGGGGATTTTTCATTTGTATTTTTTTCAAGATTTACCGCCCCCAATTTTTGGAAGCTTCACGAACTTCAG.............................................................................................................................................................................................................................GATTTTGCTATATACCTGCAACTGGAGAGTGAAAAGGTTTGAAGCATTCCTCATTTTGTGGTTTTTCCCTTGGCAGTTAGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAAGAGGGGTAGTTTGTGTTTTTGCTGCAAGAAAGGGTGCTTTGGTTTACATTTTGGACGAAGATGAAGATGAAGTTTTTGATACAGAGTGACAGTACCTTGTTGTTTGCTGGGTTTTTTGCAGGATTTATCAATTTTGGGTAGATAAAGCCAGTGCCTATCCCTTTTTAGTAAATTGTAGACTTTTTGTACCCTTTTAGTTAATAGTTATTAGTTGGATGATGTTAAAAGGGAAGAATCAACAAAATTTTACTTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E212514" ref_strand="+" ref_description="SGN-E212514 [cLEC-74-C10]">
      <seq>atagtggcttcatggatgatggagaggattctttccaggagctatcaaattcttcacatcaaagatataacattttatgtagcggggacaaggatggaagtatctgcttcaatatctttggcatatttccaatagggacagttaatatacacaaccttgttgtctccagttcactctcaagcagcaatgttgctagccgacttctgaatgcttccatttgtaaggtggccttgtccaaagatctttgccatttagtagttttgtgcaatggggagctgatcacagatgaggttgatcaaggtgaaggacatcatgggttacttggctttcactgcttagtcctcaatacttcaatattttccaaaaggaaaactgaacttcaccaggttgcccaacaggcttccaacattgaagatctgagtgaagtcatccggacatcactatcagtcatgtctaaaatatggtccgatgctatgcatacatttcacgagaagttcaatgctgtatccacattgatcgctgatcatggacttgactctactcctcaggatgagtttcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="94188" stop="90190"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93888" g_stop="93746" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="143" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93745" i_stop="93617" i_length="129">
            <donor d_prob="0.838" d_score="1.00"/>
            <acceptor a_prob="0.144" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93616" g_stop="93536" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="224" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93535" i_stop="93084" i_length="452">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.859" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93083" g_stop="92941" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="367" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="92940" i_stop="90770" i_length="2171">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.859" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="90769" g_stop="90609" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="528" r_length="161" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="90608" i_stop="90522" i_length="87">
            <donor d_prob="0.743" d_score="1.00"/>
            <acceptor a_prob="0.904" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="90521" g_stop="90490" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="560" r_length="32" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E212514" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212514" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93888" e_stop="93746"/>
          <exon e_start="93616" e_stop="93536"/>
          <exon e_start="93083" e_stop="92941"/>
          <exon e_start="90769" e_stop="90609"/>
          <exon e_start="90521" e_stop="90490"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGTGGCTTCATGGATGATGGAGAGGATTCTTTCCAGGAGCTATCAAATTCTTCACATCAAAGATATAACATTTTATGTAGCGGGGACAAGGATGGAAGTATCTGCTTCAATATCTTTGGCATATTTCCAATAGGGACAGTTGTAAGTTGTTTGTCTTCATTAAAGATGTTTTGGTTTTTTAAAAAAAATATATTTTCATTTCACCTGTCTCTTTGACTAATTGTCTGATATTTATTTCTATTATGTGGATTACTTGGACTTACTCGCTAGAATATACACAACCTTGTTGTCTCCAGTTCACTCTCAAGCAGCAATGTTGCTAGCCGACTTCTGAATGCTTCCATTTGTAAGGTATGTTTACTTTGTTGTCAACGGTCTTATGATATCTTAGTAGTCCAAAGGTTGAAGTATTGATGTCTTGTTCAACGATGCATTTTGCTATATCCTGCTTATTCACATCAATATTTTCTTTTAGTTTCCATTTCAAATAATTTCGTTGGAATTGATACCTGGAAGGTCACAGAACAGTCTCAAACATCACAAAACAATAGTGATAAAAGTAGTAATAGTAATTTAAAAAGAAAAATAGCGATAAAGATAAAAGATGCTTATGCAGAATCAGCTTTTGTTGCTCAAAAGATTTAGTGTAAGTGTGTAACACATTCCAAAAAATGATGACACCTTTAGGAATCAGGTATTGGCACTTTTCATGTGACTTGTCAGGAGAATTTTTTTGCATAGATTGTGCCAAATTCATGCCTTATTCCTATTCATTGTTCTCACTATGTATGATGTCATTGAAGGTGGCCTTGTCCAAAGATCTTTGCCATTTAGTAGTTTTGTGCAATGGGGAGCTGATCACAGATGAGGTTGATCAAGGTGAAGGACATCATGGGTTACTTGGCTTTCACTGCTTAGTCCTCAATACTTCAATATTTTCCAAAAGGTAATTGTAAAGCGAAACTTTATGAATTTTCATCTCCTGTTTTAAGATGTGAATATTCTCTATTTTGCAGCAACCAGCAATTGTTGTTTCTGAGACAATCGTCATAGATGATGATTATAGAGATGATTTGAATTTTACTTGGATCGACTTTATGGGAAATTAAAAATGAAGGACTTGAATATTGGAGATAGAAGTGCTGGAAAATATTGTTTCAAGGATTAAAATAAATAGAACAAAAAGGGAAATTTGACAGGGTAGAATGTAGCATATATGTGACACGTGTTTTTGAGGGTACGATGTGCTTAGATTTTCTACGAGTGGCTCAGTGTGTCACTGCTAAAAGGGATATTAGGCGTCATTAATTTGTACAAGGAGCATAGGCTTCCAGTTCAGTGAGATTAGGCAGAAAAAGTAGTAAGACGCAAAAGAGAGATTAGGGAGAAAAGTAAAATCAATTTAGAGAGCGCCTTGAGCTAATAAGTTTTGATAGCTATGACCCATGAAGTTAAAGGGTATCTGAGAGGTACATATATAGAAGTTGGTTGATTGGAGGGAAGCTACTTGGAAGAAGAGGGACACTCTCCAGAAAGAATGGGCTTTGCTACAACAATTAGAATTTGTTTCTCTTTCAGTCTTTCATTAAGGCTTCATAGATGTTAGTTGGATGGGTCTTTTTGATATTAGTATGGGTACTCATACGGCATTCATGAATGAGTCTTGTATTTTTGTTAAAGCCAAAGATAGCCAAGTACTTTTGTTTTGATTATCTTGATTTGATTTAATAATAGAAATCCTTAAAGAAGAAAAAATATAAGTAGTTAATTTAGAATTTCCTGTCCTTGGAGAGAAGCAAAAACAAAGAGAATTCAGCGGAGGCAAAAGAACTAGGTGATTCTTCCCATCTATCTAGCCTTGGTGGATAGAGTTATCTGAACCTTTTGCTGGTGGGAGGTGGCGGTATCCCGTGGAATCAGTTCAGGTGCATGAAAGTTGACCTGGACACCACAGTCATATAAAAACAAGAAAGAGAAATTGTATGAGAGTAATATATAGTTATTGTATGTACTGAGTATTGGTTGCGAATAGTATGTCGTTGGTTTGCTTGATGGAAGTTGAAGGCATCGGATGCCGTTCATGTGCTGCTCATCCATTGGGGCGTGATAACGTTTGTTGGGGTGATGTTGATAGTAATCAAAACATTATTACTTTCCGTGGGACTTGGCTACATTTGGCGCATAGACCTTTCCAACATGGAGTTAGAATATTCAGACATGCTTAGAGGCTTATGGCTCTCTGTCAAGAGGAAGCAAAGTTGTGGATTTGATGGGCTATTTGATGGATTCGAACATACCTACACTCACCTTGCTAAGTAGGTCAAGATAGGGTGGTGTAGGGCCTGAAAGGACATGCCTCTGTCTATGACTCCTGGCTCCCAGCAGAGTAGTTCACATCAACAACATACCTAGTGAAATTCCACAAGTGGGGTGTGGGAGGGTAGAGTGCACGAAGACCTTACCACTATCTCATGGAGAGTAGTTTACATAAGTATAGTAATATGAAGACTGGAGAATATATCCCAGGTTTGGTTTGATCCCTTCATTTTAAATAATGGACTTCTCCAACATTTTTTCTCACAGTAGTGCTCCAAAAGTTTCTTGGGTTTCCTGGAAATGAGATTGAGTGCCTTATTATTTTCTCTCACCAATTGCTGGTCCTTGTTGGATAAGAGGACTTAGCTCCTTCAGGTCGGGGCTTTCAGTTGAGGATTTTCTGTGGATCTACTCCTTTTTACATTAAGATGAAAAGTGTCCTTTTGGTGGAGCTAGTTGCATGTATAAATATGAAGCAGCCGAATCTTATCCTTATTTAGCAGAGGATGTTGGAAGGGTTGGGCAAAGCACTTAATATGGAGCTATAGTGTGTTGCCATGAAGGTGTGCAAATTTATCAGGCAAATTCAGGCTTAGCACCTGCAAACTCTTTATTACTGTGATTTGCATTTGACCATTCATAATCACAATTGCAATATATGTTTTCATGCTAACAAAGATTCTTACAATCATACTTGGATACAGACATGGTTTTGATTTTCCCTTAAACTGCTTGAACTGTGTTCTATTGATTCGAGTTTATTTGGCATGTATGTTAACTGCTGTAACCAACCAACCTCAGGAAAACTGAACTTCACCAGGTTGCCCAACAGGCTTCCAACATTGAAGATCTGAGTGAAGTCATCCGGACATCACTATCAGTCATGTCTAAAATATGGTCCGATGCTATGCATACATTTCACGAGAAGTTCAATGCTGTATCCACATTGATCGCTGATCATGGTAATGCTCAAAATCCAAAACTCAACCTTAATGGTTTCCTTCTCTTCTGCGTTGATGTTAAACTTCTGTTTTCCATTTTTCGCCTAGGACTTGACTCTACTCCTCAGGATGAGTTTCTA</genome_strand>
        <mrna_strand>ATAGTGGCTTCATGGATGATGGAGAGGATTCTTTCCAGGAGCTATCAAATTCTTCACATCAAAGATATAACATTTTATGTAGCGGGGACAAGGATGGAAGTATCTGCTTCAATATCTTTGGCATATTTCCAATAGGGACAGTT.................................................................................................................................AATATACACAACCTTGTTGTCTCCAGTTCACTCTCAAGCAGCAATGTTGCTAGCCGACTTCTGAATGCTTCCATTTGTAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCCTTGTCCAAAGATCTTTGCCATTTAGTAGTTTTGTGCAATGGGGAGCTGATCACAGATGAGGTTGATCAAGGTGAAGGACATCATGGGTTACTTGGCTTTCACTGCTTAGTCCTCAATACTTCAATATTTTCCAAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAACTGAACTTCACCAGGTTGCCCAACAGGCTTCCAACATTGAAGATCTGAGTGAAGTCATCCGGACATCACTATCAGTCATGTCTAAAATATGGTCCGATGCTATGCATACATTTCACGAGAAGTTCAATGCTGTATCCACATTGATCGCTGATCATG.......................................................................................GACTTGACTCTACTCCTCAGGATGAGTTTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E315645" ref_strand="+" ref_description="SGN-E315645 [cTOA-22-P3]">
      <seq>ggaaagaacataacttccatatgttggcgtcctgatgggaaagcaattgcagttgggcttgaagatgggaccatctccttgcatgatgtagaaaatggaaagctgctgcgaaacataaaatcccactcggctgatgtcgtgtgtctccattgggaggaggatgggaagaaggacatgaacagtaatacctccagttatgaagatcgaacttcacggttctttcctcctccccctagagttcctaagatgcctggacttgtacctggggatagtggcttcatggatgatggagaggattctttccaggagctatcaaattcttcacatcaaagatataacattttatgtagcggggacaaggatggaagtatctgcttcaatatctttggcatatttccaatagggacagttaatatacacaaccttgttgtctccagttcactctcaagcagcaatgttgctagccgacttctgaatgcttccatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="96092" stop="93240"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95792" g_stop="95700" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95699" i_stop="94808" i_length="892">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="94807" g_stop="94730" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="171" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="94729" i_stop="93986" i_length="744">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93985" g_stop="93746" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="411" r_length="240" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93745" i_stop="93617" i_length="129">
            <donor d_prob="0.838" d_score="1.00"/>
            <acceptor a_prob="0.144" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93616" g_stop="93541" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="487" r_length="76" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E315645" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E315645" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95792" e_stop="95700"/>
          <exon e_start="94807" e_stop="94730"/>
          <exon e_start="93985" e_stop="93746"/>
          <exon e_start="93616" e_stop="93541"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAGAACATAACTTCCATATGTTGGCGTCCTGATGGGAAAGCAATTGCAGTTGGGCTTGAAGATGGGACCATCTCCTTGCATGATGTAGAAGTGAGTTTGATCATATAAACGATGCTTTTCTTAGTGCATGTAGCTGTTGGTTTAAGTATGTCATGAATCTGTTTAAGCAAAATATGATAGTTGCAGGATCAAAGATATTTACCGTTCGATGATCTTATAAATTCCTTGGATTATTTCATTTCTTACTCATAAAAACAAAGAAGTAAGTTATGCCATGAGGTAGCAAATAATTATTTGAAAATAAATCACTTGATAAGATAAATTTATCCAATGGTTTTCAAACTTCTCTTGCTCGGTCTAAGTTGTTGCCATTTTCCATCTGCAATATTTGCATCCTTGTCACTATTTGCTAGATACCTACACCTGCTGTCTTCCCTGAAAGAAGTTGTACTACCCTACTTTGGAATTTGTAATGCAGAAGATATTTCTTCTCCTTTTAGAAAACTTATAGATTGTTCTTTCCCTGTAAACCTTTTAAAAGCTTTTAGTGAAGGTACACCACTATAAGTGTTCATTAAACATATCTTATAAGATATTGCATCTTGCAATGATGTGATAAAAACTTATTTGAGGATCTTATATATGTAACTTCAATGTGCATTACTTGTTTTGTATTCTACAGAAGAATACAGCACTAGTTATCTCTTGAGCATTATATTTGATGAAGAGCCTAAAACTACTTTGTTTATTTAGCTGCAAATTAGAAAAAATCCACTATGGTGACACTGAGTAATTTGCTAAAAAATATTTTTTTTCAAGAGCTTGGTGGATTTCATTAGGATTAGGTTGAGTGAGAAGAATTCCATTTTGTTGGCTTGAGCCTTTAAGTTAAGATTTGTCCCTGTCAATTAGAACATTATTGGTTCATTCTCCTGTATGTTTTCTGTACATACTGTTTTCTCATTAGTCTGTTCCCTTGCAGAATGGAAAGCTGCTGCGAAACATAAAATCCCACTCGGCTGATGTCGTGTGTCTCCATTGGGAGGAGGATGGGAAGAAGGTTTTACTTTTTGTTCAAACTTCTGACAGACTACTTTTCCATGGTTAATAGTAGTGCAAGTTTATTCAAGTTTAATGCAAGTTATTTATCATGCAAGGATTAAACGTCAGCCAGTTGAGGTCTGACTTGTTCATTTGTGAACTAAACTGCACTATTTCAATTACATTGAGTAAAGGAAAATAGTTCCTTATGTGAAAATATATTGAAAATTAAAGCCAAACTGCCCTCTCTTTCTCGTATTGAGAAAATCCATTTCTACCACAGCAGCCAGTTAACATCCATTTTTTAAATCTGAAAGTGAAAAGTCATTTAGCGTCCACCTGCAGATTCAGTTTATGCTCCATGATGAAGCCATTCTTGATTTGTTTTAATCTCTAATTAACTCAAAGAAGCTTAAAGAGTTGTTTAGCCTTCTTGCTGGATTGAACTTCCGCTAGTTGTATCTCTAGTTCCAAGATCAAACGAATTGTCTCAGACTGTTAGTGTGCAGTATAATTCTGTTGGGGAACTGCATGTTTTGATCTTTGTTATCTCTGTTAAGGTGTCGTAGCAAATTTTACGGTGGAACAGATGACTTGCAGGGAGTTGCTGCCTTATGTAGAGCCTGAAACTTTATGCTATGATACTTATTAGTTCGGAGGGTTCTGGATATGTTTTGGGTGCTTTGCTTTCTGTGCCTTCTTAAATCTTGATACTTTTGTTTCACCTTTCCTGACCTTGTAACTCTTATCTCCTGGAATTTAGGACATGAACAGTAATACCTCCAGTTATGAAGATCGAACTTCACGGTTCTTTCCTCCTCCCCCTAGAGTTCCTAAGATGCCTGGACTTGTACCTGGGGATAGTGGCTTCATGGATGATGGAGAGGATTCTTTCCAGGAGCTATCAAATTCTTCACATCAAAGATATAACATTTTATGTAGCGGGGACAAGGATGGAAGTATCTGCTTCAATATCTTTGGCATATTTCCAATAGGGACAGTTGTAAGTTGTTTGTCTTCATTAAAGATGTTTTGGTTTTTTAAAAAAAATATATTTTCATTTCACCTGTCTCTTTGACTAATTGTCTGATATTTATTTCTATTATGTGGATTACTTGGACTTACTCGCTAGAATATACACAACCTTGTTGTCTCCAGTTCACTCTCAAGCAGCAATGTTGCTAGCCGACTTCTGAATGCTTCCATTT</genome_strand>
        <mrna_strand>GGAAAGAACATAACTTCCATATGTTGGCGTCCTGATGGGAAAGCAATTGCAGTTGGGCTTGAAGATGGGACCATCTCCTTGCATGATGTAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGGAAAGCTGCTGCGAAACATAAAATCCCACTCGGCTGATGTCGTGTGTCTCCATTGGGAGGAGGATGGGAAGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACATGAACAGTAATACCTCCAGTTATGAAGATCGAACTTCACGGTTCTTTCCTCCTCCCCCTAGAGTTCCTAAGATGCCTGGACTTGTACCTGGGGATAGTGGCTTCATGGATGATGGAGAGGATTCTTTCCAGGAGCTATCAAATTCTTCACATCAAAGATATAACATTTTATGTAGCGGGGACAAGGATGGAAGTATCTGCTTCAATATCTTTGGCATATTTCCAATAGGGACAGTT.................................................................................................................................AATATACACAACCTTGTTGTCTCCAGTTCACTCTCAAGCAGCAATGTTGCTAGCCGACTTCTGAATGCTTCCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E616578" ref_strand="+" ref_description="SGN-E616578 [90046]">
      <seq>ttttgatttcatgtgaagagggggaaacttagcaaagacaggaatgttaggccggttttttcacctttctagctatatcagtctggagatcttttgaatctacaagtgacaactatgaggaagatcttggggccctgttacctccctattctggagtcttattgagtgtgtcatatctttttcttttttcttttgggtcaaataagaaagtatcctttgttttgtttacattttgcggtcagttactggttggagatccgttggtaaatgatttgtcggttgatctgcgttctccttgtatgattcagatctcagattttggacctatagatttcatgtaactgtcttattcaaaactatttgatcctttcttttcatgctttcttctaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="98295" stop="97317"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97995" g_stop="97617" g_length="379"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="378" r_length="378" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97616" i_stop="97457" i_length="160">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97456" g_stop="97452" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="383" r_length="5" r_score="0.800"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="389" polyA_stop="405"/>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E616578" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E616578" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97995" e_stop="97617"/>
          <exon e_start="97456" e_stop="97452"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCT-CTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCATATGCGTTCTCCTTGATGCTGACCATTTGCCAATGTGTGTCTATAAATTACAGTTAGTAATTCTTAAAATTGTTGCGGAAATCAAACACAGTGACTTGAGATTGGATGCAACCTTTGTTCGAATTGTTGATACGTAATTCTACTTTGATTGCCAAATTCAGCCTTT</genome_strand>
        <mrna_strand>TTTTGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGAATGTTAGGCCGGTTTTTTCACCTTTCTAGCTATATCAGTCTGGAGATCTTTTGAATCTACAAGTGACAACTATGAGGAAGATCTTGGGGCCCTGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTT-T-TTCTTTTGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGCGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCGTTCTCCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCAT................................................................................................................................................................GCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E619621" ref_strand="-" ref_description="SGN-E619621 [70313]">
      <seq>tgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcaagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtggtaaatgcatatgatggttatgatgattttgatttcatgtgaagagggggaaacttagcaaagacaggaatgttaggccggttttttcacctttctagctatatcagtctggagatcttttgaatctacaagtgacaactatgaggaagatcttggggccctgttacctccctattctggagtcttattgagtgtgtcatatctttttcttttttcttttgggtcaaataagaaagtatcctttgttttgtttacattttgcggtcagttactggttggagatccgttggtaaatgatttgtcggttgatctgcgttctccttgtatgattcagatctcagattttggacctatagatttcatgtaactgtcttattcaaaactatttgatcctttcttttaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="98557" stop="17897"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98257" g_stop="98147" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="111" r_length="111" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98071" g_stop="97617" g_length="455"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="565" r_length="454" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="97616" i_stop="97565" i_length="52">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.678" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="97564" g_stop="97549" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="566" r_stop="581" r_length="16" r_score="0.438"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E619621" ref_strand="-">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E619621" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="98257" e_stop="98147"/>
          <exon e_start="98071" e_stop="97617"/>
          <exon e_start="97564" e_stop="97549"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCT-CTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCATATGCGTTCTCCTTGATGCTGACCATTTGCCAATGTGTGTCTATAAATTACAGTTAGTAATTCTTAAAA</genome_strand>
        <mrna_strand>TGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCAAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTGGTAAATGCATATGATGGTTATGATGATTTTGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGAATGTTAGGCCGGTTTTTTCACCTTTCTAGCTATATCAGTCTGGAGATCTTTTGAATCTACAAGTGACAACTATGAGGAAGATCTTGGGGCCCTGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTT-T-TTCTTTTGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGCGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCGTTCTCCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTAAA....................................................AAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E746588" ref_strand="+" ref_description="SGN-E746588 [GI|47104162]">
      <seq>cccccancttggactgcttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaatcaactagagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggtccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagcgagagtgacttcttggaatatgctgagctgatctctcataagctgcgaccatttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaagaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtggtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccggttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgaggaagatcttggggccctgttacctccctattctggagtcttattgagtgtgtcatatctttttctttttattccgtcgggtcaaataagaaagtatcctttgttttgtttacattttgtggtcagttactggttggagatccattggtaaatgatttgtcggttgatctgtgttctcttgtatgattcagatctcagattttggacctatagatttcatgtaactgtcttattcaaaactatttgatcctttcttttcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104493" stop="97316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104194" g_stop="104074" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="182" r_length="61" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="0.96"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="301" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="435" r_length="134" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="436" r_stop="586" r_length="151" r_score="0.980"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="0.96"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="587" r_stop="746" r_length="160" r_score="0.994"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="98071" g_stop="97615" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="747" r_stop="1203" r_length="457" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E746588" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>1203</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E746588" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104194" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97615"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCCATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCATAT</genome_strand>
        <mrna_strand>CCCCCAYCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATCAACTAGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGTCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGCGAGAGTGACTTCTTGGAATATGCTGAGCTGATCTCTCATAAGCTGCGACCATTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAAGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTGGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGGTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCCTGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTTTATTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCATTGGTAAATGATTTGTCGGTTGATCTGTGTTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E397973" ref_strand="+" ref_description="SGN-E397973 [TUS-37-E11](-)">
      <seq>cataagttgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgaggaagatcttggggccatgttacctccctattctggagtcttattgagtgtgtcatatctttttctttctgttccgtcgggtcaaataagaaagtatcctttgttttgtttacattttgtggtcagttactggttggagatccgttggtaaatgatttgtcggttgatctgcattctcttgtatgattcagatctcagattttggacctatagatttcatgtaactgtcttattcaaaactatttgatcctttcttttcataaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="98612" stop="97316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98421" g_stop="98401" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="181" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98071" g_stop="97617" g_length="455"/>
          <reference_exon_boundary r_type="cDNA" r_start="182" r_stop="636" r_length="455" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="637" polyA_stop="647"/>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E397973" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E397973" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98421" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97617"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCAT</genome_strand>
        <mrna_strand>CATAAGTTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E227047" ref_strand="+" ref_description="SGN-E227047 [cLED-1-N2](-)">
      <seq>agaagattaaagcagaaaagaaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgaggaagatcttggggccatgttacctccctattctggagtcttattgagtgtgtcatatctttttctttctgttccgtcgggtcaaataagaaagtatcctttgttttgtttacattttgtggtcagttactggttggagatccgttggtaaatgatttgtcggttgatctgcattctcttgtatgattcagatctcagattttggacctatagatttcatgtaactgtcttattcaaaactatttgatcctttcttttcataaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="98494" stop="97316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98194" g_stop="98147" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="48" r_length="48" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98071" g_stop="97617" g_length="455"/>
          <reference_exon_boundary r_type="cDNA" r_start="49" r_stop="503" r_length="455" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E227047" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E227047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98194" e_stop="98147"/>
          <exon e_start="98071" e_stop="97617"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCAT</genome_strand>
        <mrna_strand>AGAAGATTAAAGCAGAAAAGAAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E229994" ref_strand="+" ref_description="SGN-E229994 [cLEL-33-P20](-)">
      <seq>gaagacaggtgcaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactnacgagaagatcttggggccatgttacctccctattctggagtcttattgagtgtgtcatatctttttctttctgttccgtcgggtcaaataagaaagtatcctttgttttgtttacattttgtggtcagttactggttggagatccgttggtaaatgatttgtcggttgatctgcattctcttgtatgattcagatctcagattttggacctatagatttcatgtaactgtcttattcaaaactatttgatcctttcttttcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="98375" stop="97316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98154" g_stop="98147" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="8" r_length="8" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98071" g_stop="97619" g_length="453"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="460" r_length="452" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="461" polyA_stop="477"/>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E229994" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E229994" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98154" e_stop="98147"/>
          <exon e_start="98071" e_stop="97619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACT-ACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTC</genome_strand>
        <mrna_strand>GAAGACAG...........................................................................GTGC-AAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTNACGA-GAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E613109" ref_strand="+" ref_description="SGN-E613109 [62879]">
      <seq>gtcatatctttttcttttttcttttgggtcaaataagaaagtatcctttgttttgtttacattttgcggtcagttactggttggagatccgttggtaaatgatttgtcggttgatctgcgttctccttgtatgattcagatctcagattttggacctatagatttcatgtaactgtcttattcaaaactatttgatcctttcttttcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="98126" stop="97316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97826" g_stop="97619" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="207" r_length="207" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="208" polyA_stop="220"/>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E613109" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>208</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E613109" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97826" e_stop="97619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCT-CTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTC</genome_strand>
        <mrna_strand>GTCATATCTTTTTCTTT-T-TTCTTTTGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGCGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCGTTCTCCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E377233" ref_strand="+" ref_description="SGN-E377233 [TUS-19-N6](-)">
      <seq>tggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgaggaagatcttggggccatgttacctccctattctggagtcttattgagtgtgtcatatctttttctttctgttccgtcgggtcaaataagaaagtatcctttgttttgtttacattttgtggtcagttactggttggagatccgttggtaaatgatttgtcggttgatctgcattctcttgtatgattcagatctcagattttggacctatagatttcatgtaactgtcttattcaaaactatttgatcctttctttaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="98744" stop="97316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98444" g_stop="98401" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="204" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98071" g_stop="97621" g_length="451"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="655" r_length="451" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="656" polyA_stop="671"/>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E377233" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>655</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377233" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98444" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97621"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTT</genome_strand>
        <mrna_strand>TGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E616839" ref_strand="+" ref_description="SGN-E616839 [90310]">
      <seq>tgagctcacgcgggccggcgttcataaactagtggatcccccggcnctgcaggtagaagcagctacatgttgataaggcagatgatgatgcagtggtaaatgcatatgatggttatgatgattttgatttcatgtgaagagggggaaacttagcaaagacaggaatgttaggccggttttttcacctttctagctatatcagtctggagatcttttgaatctacaagtgacaactatgaggaagatcttggggccctgttacctccctattctggagtcttattgagtgtgtcatatctttttcttttttcttttgggtcaaataagaaagtatcctttgttttgtttacattttgcggtcagttactggttggagatccgttggtaaatgatttgtcggttgatctgcgttctccttgtatgattcagatctcagattttggacctatagatttcatgtaactgtcttattcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="98370" stop="97339"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98071" g_stop="97630" g_length="442"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="486" r_length="440" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E616839" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="0.909" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E616839" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98071" e_stop="97630"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCT-CTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGAT</genome_strand>
        <mrna_strand>CTGC-AGGTAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTGGTAAATGCATATGATGGTTATGATGATTTTGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGAATGTTAGGCCGGTTTTTTCACCTTTCTAGCTATATCAGTCTGGAGATCTTTTGAATCTACAAGTGACAACTATGAGGAAGATCTTGGGGCCCTGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTT-T-TTCTTTTGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGCGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCGTTCTCCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E600650" ref_strand="-" ref_description="SGN-E600650 [53666]">
      <seq>aattgtttgccaagaaaggtggtgatgcctagaccctggaaattttatcccataaagcgagagtgatttcttggaatacgctgacttgatctctcataagctgcgaccatatgagaaaagctaccactacattggcttgctcaagcctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcaagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtggtaaatgcatatgatggttatgatgattttgatttcatgtgaagagggggaaacttagcaaagacaggaatgttaggccggttttttcacctttctagctatatcagtctggagatcttttgaatctaaaagtgacaactatgaggaagatcttggggccctgttacctccctattctggagtcttattgagtgtgtcatatctttttcttttttcttttgggtcaaataagaaagtatcgtttgttttgtttacattttgcggtcagttactggttggagatccgttggtaaatgatttgtcggttgatctgcgttctccttctatgattcagatctcagattttggacctatagatttcatgtaactgtcttattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="98816" stop="97343"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98516" g_stop="98401" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="0.888"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="0.86"/>
            <acceptor a_prob="0.296" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="275" r_length="160" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98071" g_stop="97643" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="703" r_length="428" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E600650" ref_strand="-">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E600650" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="98516" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97643"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCT-CTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTC</genome_strand>
        <mrna_strand>AATTGTTTGCCAAGAAAGGTGGTGATGCCTAGACCCT-GGAAATTTTATCCCATAAAGCGAGAGTGATTTCTTGGAATACGCTGACTTGATCTCTCATAAGCTGCGACCATATGAG..............................................................................................AAAAGCTACCACTACATTGGCTTGCTCAAGCCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCAAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTGGTAAATGCATATGATGGTTATGATGATTTTGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGAATGTTAGGCCGGTTTTTTCACCTTTCTAGCTATATCAGTCTGGAGATCTTTTGAATCTAAAAGTGACAACTATGAGGAAGATCTTGGGGCCCTGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTT-T-TTCTTTTGGGTCAAATAAGAAAGTATCGTTTGTTTTGTTTACATTTTGCGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCGTTCTCCTTCTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E348279" ref_strand="+" ref_description="SGN-E348279 [cTOF-27-B9]">
      <seq>gaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgagggaagatcttggggccatgttacctccctattctggagtcttattgagtgtgtcatatctttttctttctgttccgtcgggtcaaataagaaagtatcctttgttttgttacattttgtggtcagttactggttggagatccgttggtaaatgatttgtcggttgatctgcattctctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="99034" stop="97398"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98734" g_stop="98691" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="195" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="355" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98071" g_stop="97698" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="729" r_length="374" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E348279" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>729</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E348279" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98734" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97698"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGA-GGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTT</genome_strand>
        <mrna_strand>GAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTG-TTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E243540" ref_strand="+" ref_description="SGN-E243540 [cLED-34-A17]">
      <seq>tgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgaggaagatcttggggccatgttacctccctattctggagtcttattgagtgtgtcatatctttttctttctgttccgtcgggtcaaataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="98836" stop="97489"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98536" g_stop="98401" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="136" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="296" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98071" g_stop="97789" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="579" r_length="283" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E243540" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243540" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98536" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97789"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAA</genome_strand>
        <mrna_strand>TGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E241667" ref_strand="+" ref_description="SGN-E241667 [cLED-36-G17]">
      <seq>tgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgaggaagatcttggggccatgttacctccctattctggagtcttattgagtgtgtcatatctttttctttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="98836" stop="97508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98536" g_stop="98401" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="136" r_length="136" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="296" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98071" g_stop="97808" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="560" r_length="264" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E241667" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E241667" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98536" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97808"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCT</genome_strand>
        <mrna_strand>TGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E227046" ref_strand="+" ref_description="SGN-E227046 [cLED-1-N2]">
      <seq>agtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagcagatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgaggaagatcttggggccatgttacctccctattctggagtcttattgagtgtgtcatatcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="98828" stop="97516"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98528" g_stop="98401" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="288" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98071" g_stop="97816" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="544" r_length="256" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E227046" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E227046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98528" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97816"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTT</genome_strand>
        <mrna_strand>AGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCAGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E236250" ref_strand="+" ref_description="SGN-E236250 [cLED-20-A5]">
      <seq>agtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaactacgaggaagatcttggggccatgttaccttccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="98828" stop="97550"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98528" g_stop="98401" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="288" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98071" g_stop="97849" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="511" r_length="223" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E236250" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E236250" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98528" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97849"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCT</genome_strand>
        <mrna_strand>AGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E706795" ref_strand="+" ref_description="SGN-E706795 [FA30DG12]">
      <seq>cgatttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaagacaggcatgttaggccgtttttttcacctttctagctacatcagtctggagatcttttgaatctactagtgacaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="103163" stop="97582"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102863" g_stop="102808" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="174" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="308" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="459" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="619" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98071" g_stop="97882" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="620" r_stop="809" r_length="190" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E706795" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>810</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E706795" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102863" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97882"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACT</genome_strand>
        <mrna_strand>CG-ATTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E616527" ref_strand="+" ref_description="SGN-E616527 [89994]">
      <seq>ctgagttgatctctcataagctgcgaccatatgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgtttgaaagggcagatgctaaagacattggtttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcaagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtggtaaatgcatatgatggttatgatgattttgatttcatgtgaagagggggaaacttagcaaagacaggaatgttaggccggttttttcacctttctagctatatcagtctggagatcttttgaatctaaaagtgacaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="98735" stop="97584"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98435" g_stop="98401" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="35" r_length="35" r_score="0.886"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="0.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="196" r_length="161" r_score="0.962"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98071" g_stop="97884" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="384" r_length="188" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E616527" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E616527" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98435" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97884"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCG-TTGAAAGGGCAAGATGCTAAAGACATTGG-TTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAA</genome_strand>
        <mrna_strand>CTGAGTTGATCTCTCATAAGCTGCGACCATATGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTTGAAAGGGC-AGATGCTAAAGACATTGGTTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCAAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTGGTAAATGCATATGATGGTTATGATGATTTTGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGAATGTTAGGCCGGTTTTTTCACCTTTCTAGCTATATCAGTCTGGAGATCTTTTGAATCTAAAAGTGACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E377234" ref_strand="+" ref_description="SGN-E377234 [TUS-19-N6]">
      <seq>aggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaactaacaaagacaggcatgttaggccgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="101463" stop="97639"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="253" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="404" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="564" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98071" g_stop="97939" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="696" r_length="132" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E377234" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E377234" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97939"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTT</genome_strand>
        <mrna_strand>AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAAC-TAACAAAGACAGGCATGTTAGGCCGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E604069" ref_strand="+" ref_description="SGN-E604069 [67260]">
      <seq>ctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaatcaactagagatggaggattgggaggatgtaccagttccagatctacttaagaaggatcagtcaacgagtaaatgggatgatgaagatgcagaggataatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctataccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagtcgaagttcataccaatgaggagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaggctgattataagtccacagctgaattgtttgccaagaaaggtggtgatgacatgacccttgaaaattttatcccaaaaagcgagagtgatttcttggaatatgctgagttgatctctcataagctgcgaccatatgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagtacatgttgataaggcggacgatgatgcagtgcgtaaatgcatatgatggttatgatgattatgatttcatgtgaagagggggaaacttagcaaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="103171" stop="97658"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="73" r_length="61" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="0.96"/>
            <acceptor a_prob="0.953" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="192" r_length="119" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="332" r_length="140" r_score="0.888"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="0.96"/>
            <acceptor a_prob="0.949" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="483" r_length="151" r_score="0.934"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="0.90"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="643" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98071" g_stop="97958" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="644" r_stop="757" r_length="114" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E604069" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>739</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E604069" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97958"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGC----AAG--GAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGT-AGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGA</genome_strand>
        <mrna_strand>ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATCAACTAGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATGTACCAGTTCCAGATCTACTTAAGAAGGATCAGTCAACGAGTAAATGGGATGATGAAGATGCAGAGGATAATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTATACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTCGAAGTTCATACCAATGAGGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAGGCTGATTATAAGTCCACAGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACATGACCCTTGAAAATTTTATCCCAAAAAGCGAGAGTGATTTCTTGGAATATGCTGAGTTGATCTCTCATAAGCTGCGACCATATGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAG-TACATGTTGATAAGGCGGACGATGATGCAGTGCGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E729548" ref_strand="+" ref_description="SGN-E729548 [LA21BF02]">
      <seq>gagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcatgtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104475" stop="97680"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104175" g_stop="104074" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="163" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="282" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="283" r_stop="416" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="567" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="727" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="98071" g_stop="97980" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="728" r_stop="819" r_length="92" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E729548" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>819</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E729548" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104175" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97980"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGA</genome_strand>
        <mrna_strand>GAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E244451" ref_strand="+" ref_description="SGN-E244451 [cLEF-3-K22]">
      <seq>aagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgatttcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="101367" stop="97684"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101067" g_stop="101045" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="0.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="157" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="308" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="309" r_stop="468" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98071" g_stop="97984" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="556" r_length="88" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E244451" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>556</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244451" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101067" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97984"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCAT</genome_strand>
        <mrna_strand>AAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E211081" ref_strand="+" ref_description="SGN-E211081 [cLEC-69-D17]">
      <seq>tcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="103164" stop="97687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102864" g_stop="102808" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="176" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="310" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="461" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="621" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98071" g_stop="97987" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="622" r_stop="706" r_length="85" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E211081" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E211081" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102864" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97987"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTT</genome_strand>
        <mrna_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E262473" ref_strand="+" ref_description="SGN-E262473 [cLEG-56-B22]">
      <seq>cttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaatgcatatgatggttatgatgattatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104478" stop="97689"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104178" g_stop="104074" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="166" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="285" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="419" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="570" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="571" r_stop="730" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="98071" g_stop="97989" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="731" r_stop="812" r_length="82" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E262473" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>813</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E262473" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104178" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97989"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGAT</genome_strand>
        <mrna_strand>CTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGT-AATGCATATGATGGTTATGATGATTATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E710667" ref_strand="+" ref_description="SGN-E710667 [FA56AF12]">
      <seq>tctcttcccatatactcgaacttaacaagtctttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="103171" stop="97689"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="72" r_length="61" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="0.98"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="73" r_stop="191" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="325" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="476" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="636" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98071" g_stop="97989" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="637" r_stop="719" r_length="83" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E710667" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>708</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E710667" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97989"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGAT</genome_strand>
        <mrna_strand>ATACTCGAACTTAACAAGTCTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E263068" ref_strand="+" ref_description="SGN-E263068 [cLEG-59-L7]">
      <seq>agaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttatgatgattatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104452" stop="97690"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104152" g_stop="104074" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="140" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="259" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="393" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="544" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="704" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="98071" g_stop="97990" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="705" r_stop="786" r_length="82" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E263068" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>786</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E263068" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104152" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97990"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGA</genome_strand>
        <mrna_strand>AGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E698650" ref_strand="+" ref_description="SGN-E698650 [FA07AF09]">
      <seq>ctcgaacttaaccgttttttgtggacggaagagaattaactggagatggaggactgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggctcttctattactgcatttgcaaatgagaagattacagcacaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaaccagctacatgttgataacgcagatgatgatgcagtactaaatgcatatgatggttatgatgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="103150" stop="97694"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102865" g_stop="102808" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="0.92"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="177" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="311" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="462" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="622" r_length="160" r_score="0.981"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98071" g_stop="97994" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="623" r_stop="700" r_length="78" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E698650" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698650" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102865" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="97994"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATT</genome_strand>
        <mrna_strand>CTCGAACTTAACCGTTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGACTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGCTCTTCTATTACTGCATTTGCAAATGAGAAGATTACAGCACAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAACCAGCTACATGTTGATAACGCAGATGATGATGCAGTACTAAATGCATATGATGGTTATGATGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E235625" ref_strand="+" ref_description="SGN-E235625 [cLED-15-I9]">
      <seq>gaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagaagacaggtgcaaagaagaagcagctacatgttgataaggcagatgatgatgcagtagtaaatgcatatgatggttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="101404" stop="97701"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101104" g_stop="101045" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="194" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="345" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="505" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98071" g_stop="98001" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="576" r_length="71" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E235625" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235625" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101104" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="98001"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTAT</genome_strand>
        <mrna_strand>GAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E233696" ref_strand="+" ref_description="SGN-E233696 [cLED-14-J1]">
      <seq>gaagatgcagatgatgatgatgcaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggcggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgactgcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagccactgcgagtaaaaagatgacaggtgcaaagaagaagcagctacatgttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="101404" stop="97744"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101104" g_stop="101045" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="194" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="345" r_length="151" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98306" g_stop="98147" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="505" r_length="160" r_score="0.994"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75">
            <donor d_prob="0.802" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98071" g_stop="98044" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="533" r_length="28" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E233696" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>533</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233696" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101104" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98147"/>
          <exon e_start="98071" e_stop="98044"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAGGTAGCGCTGTGCTTGCTTTCTTTCTATGATAATTGTGTCATCTATTGGTAGGGTTTGTGACTTTTTTCCGTACAGGTGCAAAGAAGAAGCAGCTACATGTTGA</genome_strand>
        <mrna_strand>GAAGATGCAGATGATGATGATGCAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGCGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTGCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGATGACAG...........................................................................GTGCAAAGAAGAAGCAGCTACATGTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E264948" ref_strand="+" ref_description="SGN-E264948 [cLEI-10-H9]">
      <seq>ttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaagaagccactgcgagtaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="103158" stop="97856"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102858" g_stop="102808" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="170" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="304" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="455" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98306" g_stop="98156" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="606" r_length="151" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E264948" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>606</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E264948" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102858" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98156"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAA</genome_strand>
        <mrna_strand>TTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAAGAAGCCACTGCGAGTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E213166" ref_strand="+" ref_description="SGN-E213166 [cLEC-72-I14]">
      <seq>ttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagaattaagcagaaaaggaagccactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104477" stop="97865"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104177" g_stop="104074" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="165" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="284" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="418" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="569" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98306" g_stop="98166" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="570" r_stop="710" r_length="141" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E213166" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>710</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E213166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104177" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACT</genome_strand>
        <mrna_strand>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGAATTAAGCAGAAAAGGAAGCCACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E316318" ref_strand="+" ref_description="SGN-E316318 [cTOA-25-E13]">
      <seq>ttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagattaaagcagaaaaggaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104477" stop="97870"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104177" g_stop="104074" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="165" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="284" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="418" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="569" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98306" g_stop="98170" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="570" r_stop="706" r_length="137" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E316318" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316318" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104177" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98170"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGC</genome_strand>
        <mrna_strand>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E233029" ref_strand="+" ref_description="SGN-E233029 [cLED-6-A7]">
      <seq>aggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgagaagat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="101463" stop="97888"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="253" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="404" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98306" g_stop="98188" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="523" r_length="119" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E233029" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>523</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E233029" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98188"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGAT</genome_strand>
        <mrna_strand>AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E260922" ref_strand="+" ref_description="SGN-E260922 [cLEG-55-F5]">
      <seq>ccaagggcattttggtcatcataaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactctaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaatatgcagatgatgatgatgtaaaataatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcatttgcaaatgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104472" stop="97892"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104172" g_stop="104074" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="160" r_length="61" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="279" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="413" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="564" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98306" g_stop="98192" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="679" r_length="115" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E260922" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E260922" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104172" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98192"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGA</genome_strand>
        <mrna_strand>CCAAGGGCATTTTGGTCATCATAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCTAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAATATGCAGATGATGATGATGTAAAATAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E237885" ref_strand="+" ref_description="SGN-E237885 [cLED-18-J24]">
      <seq>tcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattgggtcttctattactgcatttgcaaatgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="103164" stop="97893"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102864" g_stop="102808" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="176" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="310" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="461" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98306" g_stop="98193" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="575" r_length="114" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E237885" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E237885" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102864" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98193"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAG</genome_strand>
        <mrna_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGGTCTTCTATTACTGCATTTGCAAATGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E698728" ref_strand="+" ref_description="SGN-E698728 [FA07BF09]">
      <seq>gggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcacatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggctcttctattactgcatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="101464" stop="97901"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="4" r_stop="122" r_length="119" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="256" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="407" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98306" g_stop="98201" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="513" r_length="106" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E698728" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>510</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698728" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98201"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTG</genome_strand>
        <mrna_strand>AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCACATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGCTCTTCTATTACTGCATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E214856" ref_strand="+" ref_description="SGN-E214856 [cLEC-78-O11]">
      <seq>ttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggttcttctattactgcattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104423" stop="97902"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104123" g_stop="104074" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="111" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="230" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="364" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="515" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98306" g_stop="98202" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="620" r_length="105" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E214856" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E214856" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104123" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTT</genome_strand>
        <mrna_strand>TTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E235548" ref_strand="+" ref_description="SGN-E235548 [cLED-11-B6]">
      <seq>tcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgctaaagacattggatcttctattactgcattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="103164" stop="97902"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102864" g_stop="102808" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="176" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="310" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="461" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98306" g_stop="98202" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="566" r_length="105" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E235548" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E235548" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102864" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTT</genome_strand>
        <mrna_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGATCTTCTATTACTGCATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E202081" ref_strand="+" ref_description="SGN-E202081 [cLEC-7-A9]">
      <seq>aaaagaaaaggagcctgctccggcacctaaaccagaaccttctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatacactagcagaacaacttcgccagcaaaggcttgtagaagaagctaattataagtgcacggctgaattgtttgccaagaaaggtggtgatgacaagacccttgaaaattttataccaaaaagtgagagtgactcctaggaatatgctgagctgatatctcataacctgccaccgtttgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgctgaaagggcatgacgctaaagacattggatcttctattact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="99128" stop="97908"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="156" r_length="134" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="0.94"/>
            <acceptor a_prob="0.949" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="307" r_length="151" r_score="0.947"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="0.92"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98306" g_stop="98208" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="406" r_length="99" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E202081" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202081" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98208"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACT</genome_strand>
        <mrna_strand>GCACCTAAACCAGAACCTTCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATACACTAGCAGAACAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTAATTATAAGTGCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTTGAAAATTTTATACCAAAAAGTGAGAGTGACTCCTAGGAATATGCTGAGCTGATATCTCATAACCTGCCACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGCTGAAAGGGCATGACGCTAAAGACATTGGATCTTCTATTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E447173" ref_strand="+" ref_description="SGN-E447173 [cSTA-25-I1]">
      <seq>gttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaatcaactagagatggaggattgggaggatgtaccagttccagatctacttaagaaggatcagccaacgagtaaatgggatgatgaagatgcagaggataatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctataccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagtcgaagttcataccaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacagctgaattgtttgccaagaaaggtggtgatgacaagacccttgaaaattttatcccaaaaagcgagagtgatttcttggaatacgctgagttgatctctcataagctgcgaccatatgagaaaagctaccactacattgggttgctcaaggctgttatgagattgtcgatgacctcgttgaaagggcaagatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104390" stop="97933"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102888" g_stop="102808" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="0.877"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="0.96"/>
            <acceptor a_prob="0.953" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="197" r_length="119" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="337" r_length="140" r_score="0.896"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="0.98"/>
            <acceptor a_prob="0.949" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="338" r_stop="488" r_length="151" r_score="0.940"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="0.88"/>
            <acceptor a_prob="0.296" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98306" g_stop="98233" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="562" r_length="74" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E447173" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>559</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E447173" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102888" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98233"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGC----AAG--GAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGC</genome_strand>
        <mrna_strand>GTTATCT-CT-CTT-CCCATATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATCAACTAGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATGTACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACGAGTAAATGGGATGATGAAGATGCAGAGGATAATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTATACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTCGAAGTTCATACCAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACAGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTTGAAAATTTTATCCCAAAAAGCGAGAGTGATTTCTTGGAATACGCTGAGTTGATCTCTCATAAGCTGCGACCATATGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E266378" ref_strand="+" ref_description="SGN-E266378 [cLEI-3-C16]">
      <seq>tcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgggttgctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="103164" stop="97979"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102864" g_stop="102808" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="176" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="310" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="461" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98306" g_stop="98279" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="489" r_length="28" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E266378" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266378" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102864" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98279"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGGTTGCTCA</genome_strand>
        <mrna_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGGTTGCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E275174" ref_strand="+" ref_description="SGN-E275174 [cLEN-9-H8]">
      <seq>agaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104452" stop="97986"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104152" g_stop="104074" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="140" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="259" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="393" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="394" r_stop="544" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98306" g_stop="98286" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="565" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E275174" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E275174" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104152" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98286"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGGG</genome_strand>
        <mrna_strand>AGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E213049" ref_strand="+" ref_description="SGN-E213049 [cLEC-72-J7]">
      <seq>aacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacattgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104449" stop="97987"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104149" g_stop="104074" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="137" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="256" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="390" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="391" r_stop="541" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98306" g_stop="98287" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="561" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E213049" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E213049" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104149" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98287"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACATTGG</genome_strand>
        <mrna_strand>AACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E262485" ref_strand="+" ref_description="SGN-E262485 [cLEG-56-F20]">
      <seq>tgactgcttgtttttctttctccatcttggactgcttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaagtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104512" stop="97990"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104212" g_stop="104074" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="200" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="319" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="453" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="604" r_length="151" r_score="0.993"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98306" g_stop="98290" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="621" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E262485" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E262485" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104212" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98290"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTGCTTGTTTTTCTTTCTCCATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACAT</genome_strand>
        <mrna_strand>TGACTGCTTGTTTTTCTTTCTCCATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAAGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E246339" ref_strand="+" ref_description="SGN-E246339 [cLEF-40-J2]">
      <seq>atcttggactgcttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104489" stop="97991"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104189" g_stop="104074" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="177" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="296" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="430" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="581" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98306" g_stop="98291" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="582" r_stop="597" r_length="16" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E246339" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>597</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246339" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104189" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98291"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACA</genome_strand>
        <mrna_strand>ATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E242823" ref_strand="+" ref_description="SGN-E242823 [cLED-31-B14]">
      <seq>gaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagctaccactaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="101404" stop="97991"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101104" g_stop="101045" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="194" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="345" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98306" g_stop="98291" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="346" r_stop="361" r_length="16" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E242823" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>361</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242823" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101104" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98291"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGCTACCACTACA</genome_strand>
        <mrna_strand>GAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGCTACCACTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E272791" ref_strand="+" ref_description="SGN-E272791 [cLEM-21-J24]">
      <seq>cttggactgcttgagcccaaggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggaccggaagagaattaactggagatggaggattgggaggatatacccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgccagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatacctaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccccggctgaattgtttgccaagaaaggtggtgatgaccagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctgcgaccgtttgagaaaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104487" stop="98101"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104187" g_stop="104074" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="176" r_length="62" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="0.96"/>
            <acceptor a_prob="0.953" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="297" r_length="121" r_score="0.966"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="432" r_length="135" r_score="0.985"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="0.96"/>
            <acceptor a_prob="0.949" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98401" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="583" r_length="151" r_score="0.987"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.296" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98306" g_stop="98301" g_length="6"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="589" r_length="6" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E272791" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E272791" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104187" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98401"/>
          <exon e_start="98306" e_stop="98301"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGA-CGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATA-CCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATG-CAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATA-CTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAGGTTTGGCAAATTTAATCTTTTCAGTCTTTTCTAATATCTTAATTGTCGGGGTTAACTTGACTGGGCATTAAATGTTTGTCTGCCATTTTTTTAGAAAAGC</genome_strand>
        <mrna_strand>CTTGGACTGCTTGAGCCCAAGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACCGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACCTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCCCGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACCAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG..............................................................................................AAAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E245532" ref_strand="+" ref_description="SGN-E245532 [cLEF-43-H2]">
      <seq>gccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcataagctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104473" stop="98113"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104173" g_stop="104074" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="100" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="101" r_stop="161" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="280" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="414" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98413" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="415" r_stop="553" r_length="139" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E245532" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E245532" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104173" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98413"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTG</genome_strand>
        <mrna_strand>GCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E246132" ref_strand="+" ref_description="SGN-E246132 [cLEF-40-K2]">
      <seq>catcttggactgcttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagaatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgaatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaagcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaagcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaagtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104490" stop="98119"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104190" g_stop="104074" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="179" r_length="62" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="0.96"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="299" r_length="120" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="433" r_length="134" r_score="0.985"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="0.98"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98419" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="566" r_length="133" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E246132" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246132" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104190" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98419"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAG-ATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATG-ATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCAT</genome_strand>
        <mrna_strand>CATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGAATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGAATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAAGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAA...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAAGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E310377" ref_strand="+" ref_description="SGN-E310377 [cTOA-10-A24]">
      <seq>ttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccacttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgccgatgatgatgatgtaaaagaatcttgggaagatgaaaaggagcctgctccggcacctaaaccataacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtggaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctacaaaattttatcccacaaagtgagagtgacttcttggaatatgctgagctgatatctcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104477" stop="98119"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104177" g_stop="104074" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="165" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="284" r_length="119" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="418" r_length="134" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98419" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="551" r_length="133" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E310377" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310377" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104177" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98419"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCAT</genome_strand>
        <mrna_strand>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCACTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCCGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAAAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCATAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTGGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTACAAAATTTTATCCCACAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E249815" ref_strand="+" ref_description="SGN-E249815 [cLEF-57-L16]">
      <seq>atcttggactgcttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatatctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104489" stop="98120"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104189" g_stop="104074" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="177" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="296" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="430" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98420" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="562" r_length="132" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E249815" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249815" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104189" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98420"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCA</genome_strand>
        <mrna_strand>ATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E271454" ref_strand="+" ref_description="SGN-E271454 [cLEM-5-P17]">
      <seq>cattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgccaagaaaggtggtgatgacaagaccctanaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgaactgatatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104465" stop="98123"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104165" g_stop="104074" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="153" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="272" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="406" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98423" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="535" r_length="129" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E271454" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E271454" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104165" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98423"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATC</genome_strand>
        <mrna_strand>CATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTANAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAACTGATATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E331139" ref_strand="+" ref_description="SGN-E331139 [cTOD-6-P5]">
      <seq>aaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcgaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgtttgcctagaaaggtggtgatgacaagaccctagaaaattttatcccaaaaagtgagagtgacttcttggaatatgctgagctgatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104450" stop="98124"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104150" g_stop="104074" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="138" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="257" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="391" r_length="134" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98424" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="519" r_length="128" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E331139" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331139" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104150" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98424"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATAT</genome_strand>
        <mrna_strand>AAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCGAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCTAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E260854" ref_strand="+" ref_description="SGN-E260854 [cLEG-55-M11]">
      <seq>cttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtacaagaagctgattataagtccacggctgaattgtttgcccacaaaggtggtgatgacaagaccctagaaaattttatcccaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104478" stop="98162"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104178" g_stop="104074" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="166" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="285" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="419" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98462" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="509" r_length="90" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E260854" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E260854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104178" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98462"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAA</genome_strand>
        <mrna_strand>CTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTACAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCCACAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E228171" ref_strand="+" ref_description="SGN-E228171 [cLED-2-E19]">
      <seq>cattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgccagcaaaggcttgtagaagaagctgattataagtccacggctgaattgttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104465" stop="98209"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104165" g_stop="104074" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="153" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="272" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="406" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.949" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98509" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="449" r_length="43" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E228171" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>449</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E228171" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104165" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98509"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTT</genome_strand>
        <mrna_strand>CATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E308097" ref_strand="+" ref_description="SGN-E308097 [cLEY-14-A23]">
      <seq>gaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaaaaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctttagatccaattacagaaaaacttcgccagcaaaggcttgttgaagaagctgattataag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104451" stop="98227"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104151" g_stop="104074" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="139" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="258" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98691" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="392" r_length="134" r_score="0.963"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139">
            <donor d_prob="0.973" d_score="0.92"/>
            <acceptor a_prob="0.949" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98551" g_stop="98527" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="417" r_length="25" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E308097" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E308097" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104151" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98691"/>
          <exon e_start="98551" e_stop="98527"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAGGTTAGGATCTTACATGCCTCATATGGAGTAGTTTTGATTGAGAAATAGAGGATTATAGTTAATAAGTTGAACTAAGATAATACAATATGGCTATTGACATCAGGAGATATTCAAATTCTTATCACATTTCTCTTTACAGGCTTGTAGAAGAAGCTGATTATAAG</genome_strand>
        <mrna_strand>GAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAAAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTTTAGATCCAATTACAGAAAAACTTCGCCAGCAAAG...........................................................................................................................................GCTTGTTGAAGAAGCTGATTATAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E267815" ref_strand="+" ref_description="SGN-E267815 [cLEI-12-E3]">
      <seq>aaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaacttcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="101434" stop="98399"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101134" g_stop="101045" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98824" g_stop="98699" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="216" r_length="126" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E267815" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>216</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267815" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101134" e_stop="101045"/>
          <exon e_start="98824" e_stop="98699"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGC</genome_strand>
        <mrna_strand>AAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E262085" ref_strand="+" ref_description="SGN-E262085 [cLEG-58-G21]">
      <seq>tgactgcttgtttttctttctccatcttggactgcttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagagcctctagatccagtagcagaaaaactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104512" stop="98402"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104212" g_stop="104074" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="200" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="319" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98702" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="442" r_length="123" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E262085" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>442</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E262085" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104212" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98702"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTGCTTGTTTTTCTTTCTCCATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTT</genome_strand>
        <mrna_strand>TGACTGCTTGTTTTTCTTTCTCCATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E201767" ref_strand="+" ref_description="SGN-E201767 [cLEC-11-O4]">
      <seq>cattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgattatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatgaagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104465" stop="98429"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104165" g_stop="104074" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="153" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="272" r_length="119" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98729" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="273" r_stop="368" r_length="96" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E201767" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>368</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E201767" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104165" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98729"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAG</genome_strand>
        <mrna_strand>CATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATTATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E354699" ref_strand="+" ref_description="SGN-E354699 [cLHT-5-B19]">
      <seq>tcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaatcaactagagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgacgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggtccccaagaagtctgctgcaaaggctgatgaaaagaaaggcaaggaagttcatactaatgaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104457" stop="98431"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104157" g_stop="104074" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="145" r_length="61" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="0.96"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="264" r_length="119" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98731" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="265" r_stop="358" r_length="94" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E354699" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>358</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E354699" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104157" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98731"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAG</genome_strand>
        <mrna_strand>TCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATCAACTAGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGACGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGTCCCCAAGAAGTCTGCTGCAAAGGCTGATGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E244849" ref_strand="+" ref_description="SGN-E244849 [cLEF-2-K6]">
      <seq>ttttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaagcccccaagaagtctgctgcaaaggctggtgaaaagaaaggcaaggaagttcatactaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104463" stop="98433"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104163" g_stop="104074" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="151" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="270" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98824" g_stop="98733" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="362" r_length="92" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E244849" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>362</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244849" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104163" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98733"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGA</genome_strand>
        <mrna_strand>TTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAAGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E252481" ref_strand="+" ref_description="SGN-E252481 [cLEG-20-K7]">
      <seq>aacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgctccggcacctaaaccagaacctcctgctgagaaggcccccaagaagtctgctgctaaggctggtgaaaagaaaggcaaggaagttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="103161" stop="98442"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102861" g_stop="102808" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="173" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98824" g_stop="98742" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="256" r_length="83" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E252481" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>256</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E252481" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102861" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98742"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCA</genome_strand>
        <mrna_strand>AACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCTAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E267588" ref_strand="+" ref_description="SGN-E267588 [cLEI-8-D5]">
      <seq>tcgaacttaacaagtttttgtggacggcatataattaactggatatggaggagggggaggatataccatttccagatctacttaagaaggatcagccaacacgtaaatgggatgatgaagatgcatatgatgatgatgtaaaagaatcttgggaagatgaagaggagcctgcttctgcacctaaaccagaacctactgctgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="103164" stop="98497"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102864" g_stop="102808" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="57" r_length="57" r_score="0.895"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="0.88"/>
            <acceptor a_prob="0.953" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101163" g_stop="101045" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="58" r_stop="176" r_length="119" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98824" g_stop="98797" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="204" r_length="28" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E267588" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>204</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267588" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102864" e_stop="102808"/>
          <exon e_start="101163" e_stop="101045"/>
          <exon e_start="98824" e_stop="98797"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCGGTATAGTAGACAACTTATTGGTTTCCTGTGTCTGTTTCGAGAACACTCTTTTTACCATTCACCAATTCCCCCACCTCCAACAAAAAAATCATCTTAATTAAACTATCTTGTTCTGATAATGCAGTTAGTTGCCTCATACCTGCTAGTGTTGTTCATTAGTATCTTGAAAAGTGGAAATTATTCTTTTGCATTGAGAATATTTACTTGGAGTGACTTATCCATGAATCATCTGAGGAATTTTCATGTCGTTGCGGATCATATTTCTGTGTTTTGCTTATGTCTTAGCACATCTGCATTAGTAGGTTTGACAGATATTTTAATCGGCTGGTGAAGTGTTTATACCTGATTAGATATTTTGTCATTTTTTTTAATAAAAAAAGAAGACATTTTGTCATGTTTTTCATGCCAACCAAGAAGTGTATTCTAATATCTGGATATCTTTGGATCCAGTTGATTTTCTCTAATACATCAGATGCTTCTCATTCTAGGTGAATTCCACTTGTTTGAGTAGGTTGTTATGCACATAATTATTTAGTTATCATACTACTAATAGATAAGTAAAGCTATGTAGATTGGGATGAAACACAACACAATAACCATGGATCTTGTCATGTGAATTTCATTTTGTGGAGTCAAGTAAAACACTCGTATATCCAATCATCTAATCATAAATACAGGTTTATATGCCTCCATATCTTGTCATTGTTTGCTGTGTGTGTAGAAACCTATGGGATGATACTTGTGTTAGTGTTTGCATATGAGTTCATAGACTAGGAATCCTCACTTTGTGTCTAATACTGAGAACAATGATATAAGCCTGATCAAGATATTATGCGGTTTTTGTCGTTTAATGTAGTAGAAACGAATGACTCATAATAAAAAAGCTATTTTGTTTTGTTATTTTTTTTTTAGTTATCATTCTCAAAAAAAAAACCTATTTTAGTTTTTTTTTGTTTAGTTATATAAGCTGACTATGTGCTCTACTAGTTTGCAAATATGAAGCGAGTGGAGTTGAGGTAAGACTAGACAGGATTGCGGTGCCAAGTGCAAACAATGAAGATATCTAGGTTCGTCTTTTCAAGAGAATGGAATGATGGATGAATGAATATATTACTAATAGAGATGTGTACATTAATATTTATGAGAAGGTTGTGTATATTGATGAGGAAAGTTCATAGGTAATGTGAGATTAAGTAAGTTTAGAACTGACCATATTCACCGTAAGGTGCAAGTAGCACGTAATGAGGACAGAAGGAGCAAATGCTGCTTTAGGTGGTTTTGTCATGTCCTTTGTCAATCAAATGTATTGTTGGTGAAACAATGATGAGCTTAAGGTTTTAAAAGGGGGTTTGTGGGGTCGGGGGTGGGTGGGATCACATGAAAAGGTAGTTGTCTTGAAAGATCTACAATACCTCGAATTACTATAGGCTCAGCTATAGATAGGGCACAATGGAAGGAAACATTAAGTAGGAGATATGTACTAGCTGAAAATAGGTTTTAGTCTTGTTTGTAAATTGTTTTTGACCTATTGCTTTTCCGGGAGTATTTTGAACTTGTAATAGATTTATACGGCAGGAAAAACTTAAGAAACTTCTATTATAATTTATTTGTTACTACTGCTGCTATTTATTTGTATATTTACATTTTAGATTAATTCTTCACTTCTGTTTTTATTTTGGCATGATGATGACATGAGTTGAACTTAAATAGATAAATATGATGAATGGAGATTCATATAGTAGTGTTGTAGCCTTTCTTTTAGCTTTGTAATCACAAGACTTAGATTTCTTAAAAGTCATTTCTGGGATGTAATTATAAGATGCTCATATTAATTGTCCATTTTAAATTTTACTTTTAACAATGTTAAACTAAAGGTTTTTCTTGCATGATTGGAAAGTTATTGATCCATGGGGAGGAATCGTAAAGAACATTATTGAATGACCTCTTTATTTGTTTCATCAGCTATTTATAGAACCAATGCCTAACAGTAGGGTGATTCTCTTCCATGGAGTATTATTTTGTAATATAACTTAATTATTATCCTTCTTGTCTTCTGTAATCATATTTGTTTCACACCTATATTTTTCTATTCGATGTGCTCTTGCGTCATGCCGCCTCCTCTGTGATTCTCATTTCCTGGTGATATGTCCCCCATGTCAAGTACCGTCTCTGCATCCTACTTCTTGGTCTAATTAACTCAAGGTGTGGTGGATTAATCAGGCACCTAAACCAGAACCTCCTGCTGAGA</genome_strand>
        <mrna_strand>TCGAACTTAACAAGTTTTTGTGGACGGCATATAATTAACTGGATATGGAGGAGGGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCATTTCCAGATCTACTTAAGAAGGATCAGCCAACACGTAAATGGGATGATGAAGATGCATATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTTCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTAAACCAGAACCTACTGCTGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E247841" ref_strand="+" ref_description="SGN-E247841 [cLEF-47-K3]">
      <seq>tatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggaggatataccagttccagatctacttaagaaggatcagccaacaagtaaatgggatgatgaagatgcagatgatgatgatgtaaaagaatcttgggaagatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="103171" stop="100761"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="76" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.953" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101163" g_stop="101061" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="179" r_length="103" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E247841" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>164</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E247841" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="101163" e_stop="101061"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTATTGACATAATTGCCTAAGTTTTGTTATTTGGTAGCGACCTCTGAGTTTGATTCACTTGACAAATCTTTTAGTTTTAAGCCACATTTGATATGCAAGATAGTCTATAACATGCATGTTTTATTTCAGAGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGA</genome_strand>
        <mrna_strand>ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E317424" ref_strand="+" ref_description="SGN-E317424 [cTOA-28-H21]">
      <seq>aaaagagagatgcatccaaagaaactatattagatttagggagctaaagtccaaaacagaccagtgcaatttgaggtgctccaactaattaaccaggcatctagcttttgaagagtggacggatttgagattccatcaaaacatatacggttctaactgtgtaagtacaccaaaagatattcacagggatcataatccggatctcctctgactttaaaacttcatcaactccaagattcatagacttctgtgactctctgtggtatgaccctattgacttcaaaatagagtagaacgattcctcaagtcagcaacaattttgttttagccttatatatgctttgtcatcactcacaccacaacagggttttgtgtgtggcagaaatgaaacggaataaacaataatctaagaattcatctcactaatcaatggtaagctgcttatgctgtctctattgtggtaagcgtttaataatacttgcttctggattgtctaagtgctcagcctattcacttgaactcactggttcattttttagcatagcatttacaagaagcaactaccattgtaactggttgactgttcacagtaattggaataaaaccatagatgttggttccctatttctggagattttgcttgttcaaaccagtttatttttgggtttgattcatttgtctttctgagaagacttggattcccctctcatgggacattgacatggnttattgtgcatgcagaaaaagggatgtaccataatcttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="102354" stop="100989"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102054" g_stop="101289" g_length="766"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="766" r_length="766" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E317424" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>766</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E317424" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102054" e_stop="101289"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTAT</genome_strand>
        <mrna_strand>AAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCCTCTCATGGGACATTGACATGGNTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E334178" ref_strand="+" ref_description="SGN-E334178 [cTOD-21-B17]">
      <seq>ttgagccaagggcattttggtcatcagaaacgctgcttcacattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattggggtgtcaagaagatgcaaaaggtacaaaagagagatgcatccaaagaaactatattagatttagggagctaaagtccaaaacagaccagtgcaatttgaggtgctccaactaattaaccaggcatctagcttttgaagagtggacggatttgagattccatcaaaacatatacggttctaactgtgtaagtacaccaaaagatattcacagggatcataatccggatctcctctgactttaaaacttcatcaactccaagattcatagacttctgtgactctctgtggtatgaccctattgacttcaaaatagagtagaacgattcctcaagtcagcaacaattttgttttagccttatatatgctttgtcatcactcacaccacaacagggttttgtgtgtggcagaaatgaaacggaataaacaataatctaagaattcatctcactaatcaatggtaagctgcttatgctgtctctattgtggtaagcgtttaataatacttgcttctggattgtctaagtgctcagcctattcacttggactcactggttcattttttagcatagcatttacaagaagcaactaccattgtaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104477" stop="101180"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104177" g_stop="104074" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="165" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="102807" i_stop="102079" i_length="729">
            <donor d_prob="0.844" d_score="1.00"/>
            <acceptor a_prob="0.821" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="102078" g_stop="101480" g_length="599"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="764" r_length="599" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E334178" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>764</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E334178" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104177" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
          <exon e_start="102078" e_stop="101480"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGGGTAATGTTGATATTTCTAACTGTTTTTGTAACTATCTTCCTAAGGAAAACTAATTCAATTACTTGTGATGCTAATACATCTTGCTTTACTTAGGATTCAATTCATTTCCCTTCATACTTAATTGTTCTTACTGAAATGGAAAGCATTAAAACATGATTGTTTATGTATTCCCTTGCTATTTAATGATAGAGTATTCATTTATAAACTCTGTGTAACTTTTATATTGGAGTAAAATGTCCCTTGCTGAGTACTTAGTGCAAGACTGGTATGGTTTTTCCTTGTGCTGTATGTTCCTCAACATTGATATTTTTCAACTACTGTCCTGAAGGCTGTGGTCTGGTAGACAAAGTTCTGTACCATAAATCTAATTTGAAGATTTAAAATATATTTAGTGTTGTAGCTTCTCTTTTGCCAAATTCACCGAAGATACAATCACCGTGTTCATTTGTGATCCTTTCTATTCAAAAGAAGTTTTGAAATGTAGCATAGCAATCATGATCATGTAGGATTCCAGGTGTTTGAGGTGTGTAATCGCTCCCTGCAATTCCCCATTGCTACGGAAAATCTCAGTCTAACTAGGTGTACAATGTAAATAATGTTTCTCTTCTTTGGGGACAATGTCTTGTATGACTGCAGGACAACATTAACACAAGAGTCCTTGTTCCATATTTTGTACTTGGTGCGCGCAGTTCATTTTCTTTTGGATGAAGTAAGATGTTTCATTAATAGGTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTG</genome_strand>
        <mrna_strand>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGGACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E261316" ref_strand="+" ref_description="SGN-E261316 [cLEG-68-L10]">
      <seq>agggcattttggtcatcagaaacgctgcttcagcattctgctattgcttaaccatttttcatcagatttgttcacctctggttatctctcttcccatatactcgaacttaacaagtttttgtggacggaagagaattaactggagatggaggattgggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104469" stop="102508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104169" g_stop="104074" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="0.979"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.981" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="102868" g_stop="102808" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="158" r_length="61" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E261316" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>157</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E261316" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104169" e_stop="104074"/>
          <exon e_start="102868" e_stop="102808"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGCATTTTGGTCATCAGAAACGCTGCTTCA-CATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCATGTAAGTTTCTCCTTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTGTGTTATGTTTTTTGGCAAGTCTGTATGTGTGGATAATAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTTTATTGACACTTTGTTATGGTTTTTGACTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGATTGAGGTGATTTTCTTGATTAATATTGGAGTTCCATTGACTTTGTGTTATGGTTTTTGACAAGTTTGTGTGTGTGGGTATTAATAGAATCTTGGGAGCAAGGTGATTTTCTTGATTAGTATTGGGGTTCCATTGACATTTTGTTATGAGTTTTGGCAAGTCTGTATGTGTGGGTATTAATAGAATCCTGGGAGTTAGGTTAGGTTATTTTCTTGATTAATATTGGAGTTATATTGACACTTTGTTATGGTTTTTGATTATTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGCGATGTTCTTGATTAATCTTGGAGTTCTATTTGCATAATTGAATGATTTGATTTTCCTGTATATTAATGATTTGATTAAAAAGGTTTCTGTTGCTGATATTTTGGTTTCTCTGGAAAAAGAACTGACTTTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG</genome_strand>
        <mrna_strand>AGGGCATTTTGGTCATCAGAAACGCTGCTTCAGCATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E297013" ref_strand="+" ref_description="SGN-E297013 [cLEW-6-H1]">
      <seq>ttcttcatctattgggttattgctctgtttttggtttattcgttcaatcttgtttcttggttcaatttattgtttttctctgcgattggcgtcttcggaggtatatatatgcgtcagtatttgagtcgcacgcatcatatcatatattcttgtgtctatgaacggaaattagggctttcggatttgtaacttttgagaactgatttagtggcggttttagggttcagccgcctttgccgaccttttatacaatgtccgaccgactcgaacactgatgttaattgacacttttttcttccactgttttatggtttttgacaagtctctgtgtgtgtaggtattgatataatttgggcagcgaggtgatgttcttgattaatattggcgttttattgacactgtgttatggtttttgacaattttgtatgtgtgggtattgatagaatcttgggagtgaggtgaatttcttgattaatattggagttccattgacattgtgttatggtttttgacaagtttgtatgtgtgggtattaatagaatcttgggagcgaggtgattttcttgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104361" stop="103193"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104061" g_stop="103493" g_length="569"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="569" r_length="569" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E297013" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E297013" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104061" e_stop="103493"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATT</genome_strand>
        <mrna_strand>TTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E297011" ref_strand="+" ref_description="SGN-E297011 [cLEW-6-F1]">
      <seq>ttcttcatctattgggttattgctctgtttttggtttattcgttcaatcttgtttcttggttcaatttattgtttttctctgcgattggcgtcttcggaggtatatatatgcgtcagtatttgagtcgcacgcatcatatcatatattcttgtgtctatgaacggaaattagggctttcggatttgtaacttttgagaactgatttagtggcggttttagggttcagccgcctttgccgaccttttatacaatgtccgaccgactcgaacactgatgttaattgacacttttttcttccactgttttatggtttttgacaagtctctgtgtgtgtaggtattgatataatttgggcagcgaggtgatgttcttgattaatattggcgttttattgacactgtgttatggtttttgacaattttgtatgtgtgggtattgatagaatcttgggagtgaggtgaatttcttgattaatattggagttccattgacattgtgttatggtttttgacaagtttgtatgtgtgggtattaatagaatcttggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104361" stop="103213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104061" g_stop="103513" g_length="549"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="549" r_length="549" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E297011" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E297011" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104061" e_stop="103513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGA</genome_strand>
        <mrna_strand>TTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E297009" ref_strand="+" ref_description="SGN-E297009 [cLEW-6-D1]">
      <seq>ttcttcatctattgggttattgctctgtttttggtttattcgttcaatcttgtttcttggttcaatttattgtttttctctgcgattggcgtcttcggaggtatatatatgcgtcagtatttgagtcgcacgcatcatatcatatattcttgtgtctatgaacggaaattagggctttcggatttgtaacttttgagaactgatttaatggcggttttagggttcaaccgcctttgccgaccttttatacaatgtccgaccgactcgaacactgatgttaattgacacttttttcttccactgttttatggtttttgacaagtctctgtgtgtgtaggtattgatataatttgggcagctgaggtgatgttcttgattaatattggcgttttattgacactgtgttatggatgttgacaatcttgtatgtgtgggtatcgatagaatcttgggagtgaggtgaattacttgattaatattggagttccattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="-" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="104361" stop="103270"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104061" g_stop="103570" g_length="492"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="493" r_length="493" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="-" ref_id="SGN-E297009" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E297009" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104061" e_stop="103570"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGC-GAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGA</genome_strand>
        <mrna_strand>TTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAATGGCGGTTTTAGGGTTCAACCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCTGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGATGTTGACAATCTTGTATGTGTGGGTATCGATAGAATCTTGGGAGTGAGGTGAATTACTTGATTAATATTGGAGTTCCATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E745408" ref_strand="+" ref_description="SGN-E745408 [GI|47105670]">
      <seq>ggagtccccatttccccataacaaccaagaaaaagttgaagtgcttcatcttctcagttcaataatcaattggtgaagttggattgtatctgtttctgtgtggcagataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagccgtctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaataccaggtgttactgctggtaaagatgctggaatggcagtagttgctgtaccatctcttgcaaagcagtctcatctttatacctctgctgatgaagtgatcaattctcttctagatttgcaactagaaaagtggggactacctgcatttcaagataggatagaaggtactttgcctttagaaccttggtatataggtggtcctgtcattaagggatttgggcgcggctcaaaggttctcgggatccccacagctaatttatccccacaaggttattcagccattctttcagaacatccagcgggtgtatattttggatgggcaggactatcaggtcgaggtgtctacaagatggtcatgagcattggttggaatcctttcttcaacaatacagagaagacggttgaaccatggttgcttcatgacttcaatgaggacttctatggtgaggaattgcatctagttgttgtgggctacatacggccggaggccaacttttcgtcacttgaagccttgatagcaaaaattcacgaggacaggaagattgcagaaagagctctcgaacttcctcaatacttgaagtacaaggacgatccataccttaaaagttctctgcatcaacaaaattgatcattgaagtgttgaagttcattattgttctgattgggattgtatctgtttattctgtcctaattcctcagactacaatagtctccccatcaaaatgctctatacaataaaaagataaaaagaatttgaatgtatagctattcagaagttaaagaaccttccagggggtattagtgaatggcaaagggttcaagtgcaggatctttgtactgagaatttcaagttcctgtgtaaatgttgattaatgtaacttgttttctatctgtttataatatggaaacatgcaagctgatgcagattgtaaattgcttccttttaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="128664" stop="134260"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128962" g_stop="129046" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129047" i_stop="129663" i_length="617">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.549" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129664" g_stop="129773" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="195" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130371" g_stop="130557" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="382" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="513" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131728" g_stop="131797" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="514" r_stop="583" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="131889" g_stop="131954" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="584" r_stop="649" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="131955" i_stop="132502" i_length="548">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="132503" g_stop="132657" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="650" r_stop="804" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="132658" i_stop="132742" i_length="85">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="132743" g_stop="132838" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="805" r_stop="900" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="132839" i_stop="133116" i_length="278">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="133117" g_stop="133265" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="901" r_stop="1052" r_length="152" r_score="0.960"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="133266" i_stop="133342" i_length="77">
            <donor d_prob="0.575" d_score="0.87"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="133343" g_stop="133426" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1053" r_stop="1136" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="133427" i_stop="133501" i_length="75">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="133502" g_stop="133959" g_length="458"/>
          <reference_exon_boundary r_type="cDNA" r_start="1137" r_stop="1594" r_length="458" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1595" polyA_stop="1613"/>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E745408" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1591</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745408" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128962" e_stop="129046"/>
          <exon e_start="129664" e_stop="129773"/>
          <exon e_start="130371" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131797"/>
          <exon e_start="131889" e_stop="131954"/>
          <exon e_start="132503" e_stop="132657"/>
          <exon e_start="132743" e_stop="132838"/>
          <exon e_start="133117" e_stop="133265"/>
          <exon e_start="133343" e_stop="133426"/>
          <exon e_start="133502" e_stop="133959"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGTCCCCATTTCCCCATAACAACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATAGTAAGTCTTTATGACTGCTTTACTTGTATGACGTGTAGTCATGTACTTGATTTCTCTTCCAATTTTTGACTGGAAGCATATGCAGGGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTC-AC-ATACAGAG-AGACGGTTGTAAGTGTGTCGTGACATATGTTTCTTCTGTATTCTTGACTTCTTTGGTGTTTGTTGAAAGACAACTTTACTTTTAGGAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACATACGGCCGGAGGTATTGTGGCCTAGTTACTCTTATTTTTCCCTTTCCTTTCTTACATCACTTGCTGATATTACTGTCTATTTGCAGGCCAACTTTTCGTCACTTGAAGCCTTGATAGCAAAAATTCACGAGGACAGGAAGATTGCAGAAAGAGCTCTCGAACTTCCTCAATACTTGAAGTACAAGGACGATCCATACCTTAAAAGTTCTCTGCATCAACAAAATTGATCATTGAAGTGTTGAAGTTCATTATTGTTCTGATTGGGATTGTATCTGTTTATTCTGTCCTAATTCCTCAGACTACAATAGTCTCCCCATCAAAATGCTCTATACAATAAAAAGATAAAAAGAATTTGAATGTATAGCTATTCAGAAGTTAAAGAACCTTCCAGGGGGTATTAGTGAATGGCAAAGGGTTCAAGTGCAGGATCTTTGTACTGAGAATTTCAAGTTCCTGTGTAAATGTTGATTAATGTAACTTGTTTTCTATCTGTTTATAATATGGAAACATGCAAGCTGATGCAGATTGTAAATTGCTTCCTTTT</genome_strand>
        <mrna_strand>GGAGTCCCCATTTCCCCATAACAACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA.....................................................................................GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAG......................................................................................................................................................................................................................................................................................CTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTT.............................................................................GAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACATACGGCCGGAG...........................................................................GCCAACTTTTCGTCACTTGAAGCCTTGATAGCAAAAATTCACGAGGACAGGAAGATTGCAGAAAGAGCTCTCGAACTTCCTCAATACTTGAAGTACAAGGACGATCCATACCTTAAAAGTTCTCTGCATCAACAAAATTGATCATTGAAGTGTTGAAGTTCATTATTGTTCTGATTGGGATTGTATCTGTTTATTCTGTCCTAATTCCTCAGACTACAATAGTCTCCCCATCAAAATGCTCTATACAATAAAAAGATAAAAAGAATTTGAATGTATAGCTATTCAGAAGTTAAAGAACCTTCCAGGGGGTATTAGTGAATGGCAAAGGGTTCAAGTGCAGGATCTTTGTACTGAGAATTTCAAGTTCCTGTGTAAATGTTGATTAATGTAACTTGTTTTCTATCTGTTTATAATATGGAAACATGCAAGCTGATGCAGATTGTAAATTGCTTCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E313806" ref_strand="+" ref_description="SGN-E313806 [cTOA-17-A11]">
      <seq>aacaaccaagattaagttgaggtgcttcatcttctcaggggaataatcaattggtgaagttggattataattgctctccatgtctgtggaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="128681" stop="130687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128981" g_stop="129046" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="0.909"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129047" i_stop="129684" i_length="638">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.976" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129685" g_stop="129773" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="155" r_length="89" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130371" g_stop="130387" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="172" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E313806" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>172</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E313806" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128981" e_stop="129046"/>
          <exon e_start="129685" e_stop="129773"/>
          <exon e_start="130371" e_stop="130387"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAG</genome_strand>
        <mrna_strand>AACAACCAAGATTAAGTTGAGGTGCTTCATCTTCTCAGGGGAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTGGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E324511" ref_strand="+" ref_description="SGN-E324511 [cTOC-9-K17]">
      <seq>accaagaaaaagttgaagtgcttcatcttctcagttcaataatcaattggtgaagttggattataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="128685" stop="132083"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128985" g_stop="129046" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129047" i_stop="129684" i_length="638">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129685" g_stop="129773" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="151" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130371" g_stop="130557" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="338" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="469" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131728" g_stop="131783" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="470" r_stop="525" r_length="56" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E324511" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E324511" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128985" e_stop="129046"/>
          <exon e_start="129685" e_stop="129773"/>
          <exon e_start="130371" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131783"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAG</genome_strand>
        <mrna_strand>ACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E589912" ref_strand="+" ref_description="SGN-E589912 [43496]">
      <seq>ctcagttccattgcttcatcttctcagttcaataatcaattggtgaagttggatttatagcattatcaggtatctgtttctgtgtggtagataattgctctccatgtctgttgaacgaactttgaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagcagggaaaaccccaacagaagctgcggctgctgttgttgaagattatgggctgccactgtcaacagatgaatttctttcgcaattttacccaatgctgtctgaccagtggcgcaatatcaaagctgttccaggggccaatcgattgattaaccatttgaggggtcatggtgtacccatggcattggcgtcaaattcttctagatctaacatagaggccaaaatttttcatcatgcaggatggaaagaatccttctcagctattgttggaggagacgaagtgaaagctggaaagccatctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaataccaggtgttactgctggtaaggctgctggaatggcagtagttgctgtaccatctcttgcaaagcagtctcatctttatacttctgctgatgacgtgatcaattctcttctagatttgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="128695" stop="132922"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128992" g_stop="129060" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="0.812"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129061" i_stop="129663" i_length="603">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.549" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129664" g_stop="129773" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="179" r_length="110" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130371" g_stop="130557" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="366" r_length="187" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="497" r_length="131" r_score="0.969"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131728" g_stop="131797" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="567" r_length="70" r_score="0.957"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91">
            <donor d_prob="0.968" d_score="0.96"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="131889" g_stop="131954" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="568" r_stop="633" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="131955" i_stop="132502" i_length="548">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="132503" g_stop="132622" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="753" r_length="120" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E589912" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>753</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E589912" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128992" e_stop="129060"/>
          <exon e_start="129664" e_stop="129773"/>
          <exon e_start="130371" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131797"/>
          <exon e_start="131889" e_stop="131954"/>
          <exon e_start="132503" e_stop="132622"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCA</genome_strand>
        <mrna_strand>CTCAGTTCCATTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTTATAGCATTATCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGTTTCTGTGTGGTAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTGAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGCAGGGAAAACCCCAACAGAAGCTGCGGCTGCTGTTGTTGAAGATTATGGGCTGCCACTGTCAACAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTGTTCCAGGGGCCAATCGATTGATTAACCATTTGAGGGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAGATCTAACATAGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAATCCTTCTCAGCTATTGTTGGAGGAGACGAAGTGAAAGCTGGAAAGCCATCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAGGCTGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACTTCTGCTGATGACGTGATCAATTCTCTTCTAGATTTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E264327" ref_strand="+" ref_description="SGN-E264327 [cLEG-70-F24]">
      <seq>aaagttgaagtgcttcatcttctcagttcaataatcaattggtgaagttggattataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="128693" stop="132061"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128993" g_stop="129046" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129047" i_stop="129684" i_length="638">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129685" g_stop="129773" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="143" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130371" g_stop="130557" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="330" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="461" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131728" g_stop="131761" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="495" r_length="34" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E264327" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>495</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264327" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128993" e_stop="129046"/>
          <exon e_start="129685" e_stop="129773"/>
          <exon e_start="130371" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131761"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGG</genome_strand>
        <mrna_strand>AAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E688590" ref_strand="+" ref_description="SGN-E688590 [t3_tus_54_B10]">
      <seq>ttgaagtgcttcatcttctcagttcaataatcaattggtgaagttggattataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="128697" stop="132082"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128997" g_stop="129046" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129047" i_stop="129684" i_length="638">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129685" g_stop="129773" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="139" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130371" g_stop="130557" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="326" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="457" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131728" g_stop="131782" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="512" r_length="55" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E688590" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E688590" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128997" e_stop="129046"/>
          <exon e_start="129685" e_stop="129773"/>
          <exon e_start="130371" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131782"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAA</genome_strand>
        <mrna_strand>TTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E252181" ref_strand="+" ref_description="SGN-E252181 [cLEG-8-L1]">
      <seq>tgaagtgcttcatcttctcagttcaataatcaattggtgaagttggattataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattngattaaaaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagccgtctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaataccaggtgttactgctggtaaagatgctggaatggcagtagttgctgtaccatctcttgcaaagcagtctcatctttatacctctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="128698" stop="132890"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128998" g_stop="129046" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129047" i_stop="129684" i_length="638">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129685" g_stop="129773" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="138" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130371" g_stop="130557" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="325" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="460" r_length="135" r_score="0.939"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131728" g_stop="131797" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="530" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="131889" g_stop="131954" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="531" r_stop="596" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="131955" i_stop="132502" i_length="548">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="132503" g_stop="132590" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="597" r_stop="684" r_length="88" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E252181" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E252181" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128998" e_stop="129046"/>
          <exon e_start="129685" e_stop="129773"/>
          <exon e_start="130371" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131797"/>
          <exon e_start="131889" e_stop="131954"/>
          <exon e_start="132503" e_stop="132590"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATT-GATT---AACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCT</genome_strand>
        <mrna_strand>TGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTNGATTAAAAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E251527" ref_strand="+" ref_description="SGN-E251527 [cLEG-9-M1]">
      <seq>tgaagtgcttcatcttctcagttcaataatcaattggtgaagttggattataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagccgtctccggaaatatttcttgaagcagctaaaagactcaacatggatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="128698" stop="132223"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128998" g_stop="129046" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129047" i_stop="129684" i_length="638">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129685" g_stop="129773" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="138" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130371" g_stop="130557" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="325" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="456" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131728" g_stop="131797" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="526" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="131889" g_stop="131923" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="561" r_length="35" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E251527" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E251527" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128998" e_stop="129046"/>
          <exon e_start="129685" e_stop="129773"/>
          <exon e_start="130371" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131797"/>
          <exon e_start="131889" e_stop="131923"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATC</genome_strand>
        <mrna_strand>TGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E251408" ref_strand="+" ref_description="SGN-E251408 [cLEG-9-M13]">
      <seq>tgaagtgcttcatcttctcagttcaataatcaattggtgaagttggattataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="128698" stop="132051"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128998" g_stop="129046" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129047" i_stop="129684" i_length="638">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129685" g_stop="129773" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="138" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130371" g_stop="130557" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="325" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="456" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131728" g_stop="131751" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="480" r_length="24" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E251408" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E251408" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128998" e_stop="129046"/>
          <exon e_start="129685" e_stop="129773"/>
          <exon e_start="130371" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131751"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTA</genome_strand>
        <mrna_strand>TGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E614797" ref_strand="+" ref_description="SGN-E614797 [64588]">
      <seq>cattgcttcatcttctcagttcaataatcaattggtgaagttggatttatagcattatcaggtatctgtttctgtgtggtagataattgctctccatgtctgttgaacgaactttgaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagcagggaaaaccccaacagaagctgcggctgctgttgttgaagattatgggctgccactgtcaacagatgaatttctttcgcaattttacccaatgctgtctgaccagtggcgcaatatcaaagctgttccaggggccaatcgattgattaaccatttgaggggtcatggtgtacccatggcattggcgtcaaattcttctagatctaacatagaggccaaaatttttcatcatgcaggatggaaagaatccttctcagctattgttggaggagacgaagtgaaagctggaaagccatctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgacagattcaataccaggtgttactgctggtaaggctgctggaaatggcagtagttgcttgtaccatctcttggcaaagcagtctccatctttatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="128701" stop="132883"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129000" g_stop="129060" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.852"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129061" i_stop="129663" i_length="603">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.549" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129664" g_stop="129773" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="171" r_length="110" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130371" g_stop="130557" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="358" r_length="187" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="489" r_length="131" r_score="0.969"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131728" g_stop="131797" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="559" r_length="70" r_score="0.957"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91">
            <donor d_prob="0.968" d_score="0.96"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="131889" g_stop="131954" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="560" r_stop="626" r_length="67" r_score="0.970"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="131955" i_stop="132502" i_length="548">
            <donor d_prob="0.991" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="132503" g_stop="132583" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="627" r_stop="711" r_length="85" r_score="0.877"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E614797" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E614797" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129000" e_stop="129060"/>
          <exon e_start="129664" e_stop="129773"/>
          <exon e_start="130371" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131797"/>
          <exon e_start="131889" e_stop="131954"/>
          <exon e_start="132503" e_stop="132583"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGA-AGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGG-AATGGCAGTAGTTGC-TGTACCATCTCTT-GCAAAGCAGTCT-CATCTTTATAC</genome_strand>
        <mrna_strand>CATTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTTATAGCATTATCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGTTTCTGTGTGGTAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTGAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGCAGGGAAAACCCCAACAGAAGCTGCGGCTGCTGTTGTTGAAGATTATGGGCTGCCACTGTCAACAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTGTTCCAGGGGCCAATCGATTGATTAACCATTTGAGGGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAGATCTAACATAGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAATCCTTCTCAGCTATTGTTGGAGGAGACGAAGTGAAAGCTGGAAAGCCATCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGACAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAGGCTGCTGGAAATGGCAGTAGTTGCTTGTACCATCTCTTGGCAAAGCAGTCTCCATCTTTATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E550858" ref_strand="+" ref_description="SGN-E550858 [TUS-54-B10]">
      <seq>aagtgcttcatcttctcagttcaataatcaattggtgaagttggattataattgctctccatgtctgttgaacgaactttcaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="128700" stop="132084"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129000" g_stop="129046" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="47" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129047" i_stop="129684" i_length="638">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129685" g_stop="129773" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="136" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130371" g_stop="130557" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="323" r_length="187" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="454" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131728" g_stop="131784" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="511" r_length="57" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E550858" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E550858" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129000" e_stop="129046"/>
          <exon e_start="129685" e_stop="129773"/>
          <exon e_start="130371" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131784"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGC</genome_strand>
        <mrna_strand>AAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E576859" ref_strand="+" ref_description="SGN-E576859 [60144]">
      <seq>caagcttcggtttctcagttcccatttcttcatcttctcagttccattgcttcgatcttctcagttcaataatcaattggtgaagttggatttatagcattatcaggtatctgtttctgtgtggtagataattgctctccatgtctgttgaacgaactttgaagaagttagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgcggctgctgttgttgaagattatgggctgccactgtcaacagatgaatttctttcgcaattttacccaatgctgtctgaccagtggcgcaatatcaaagctgttccaggggccaatcgattgattaaccatttgaggggtcatggtgtacccatggcattggcgtcaaattcttctagatctaacatagaggccaaaatttttcatcatgcaggatggaaagaatccttctcagctattgttggaggagacgaagtgaaagctggaaagccatctccggaaatatttcttgaagcggtaaaagactcaacatggatccatccagctttcttgtcattgaagattcaataccaggtgttactgctggtaaggctgctggaatggcagtagttgctgtaccatctcttgcaaagcagtctcatctttatacttctgctgatgaagtgatcaattctcttctagatttgcactagaaaagtggggactacctgcattcaagatagatagaaggtactttgctttaaacctggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="128695" stop="133075"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129003" g_stop="129060" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="106" r_length="59" r_score="0.845"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129061" i_stop="129663" i_length="603">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.549" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129664" g_stop="129773" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="216" r_length="110" r_score="0.973"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130371" g_stop="130557" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="403" r_length="187" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="404" r_stop="534" r_length="131" r_score="0.969"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131728" g_stop="131797" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="535" r_stop="604" r_length="70" r_score="0.957"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91">
            <donor d_prob="0.968" d_score="0.96"/>
            <acceptor a_prob="0.686" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="131889" g_stop="131954" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="669" r_length="65" r_score="0.970"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="131955" i_stop="132502" i_length="548">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="132503" g_stop="132657" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="670" r_stop="822" r_length="153" r_score="0.968"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="132658" i_stop="132742" i_length="85">
            <donor d_prob="0.903" d_score="0.96"/>
            <acceptor a_prob="0.905" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="132743" g_stop="132776" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="823" r_stop="852" r_length="30" r_score="0.853"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E576859" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>811</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E576859" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129003" e_stop="129060"/>
          <exon e_start="129664" e_stop="129773"/>
          <exon e_start="130371" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131797"/>
          <exon e_start="131889" e_stop="131954"/>
          <exon e_start="132503" e_stop="132657"/>
          <exon e_start="132743" e_stop="132776"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTC-ATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATAGTAAGTCTTTATGACTGCTTTACTTGTATGACGTGTAGTCATGTACTTGATTTCTCTTCCAATTTTTGACTGGAAGCATATGCAGGGATAGAAGGTACTTTGCCTTTAGAACCTTGGTA</genome_strand>
        <mrna_strand>TGCTTCGATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTTATAGCATTATCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGTTTCTGTGTGGTAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTGAAGAAGTTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCGGCTGCTGTTGTTGAAGATTATGGGCTGCCACTGTCAACAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTGTTCCAGGGGCCAATCGATTGATTAACCATTTGAGGGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAGATCTAACATAGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAATCCTTCTCAGCTATTGTTGGAGGAGACGAAGTGAAAGCTGGAAAGCCATCTCCGGAAAT...........................................................................................ATTTCTTGAAGC-GGTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAGGCTGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACTTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGC-ACTAGAAAAGTGGGGACTACCTGCA-TTCAAGATA.....................................................................................-GATAGAAGGTACTTTG-CTTTA-AACC-TGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E562455" ref_strand="+" ref_description="SGN-E562455 [895]">
      <seq>tgctcagttccattgcttcatcttctcagttcaataatcaattggtgaagttggatttatagcattatcaggtatctgtttctgtgtggtagataattgctctccatggtctgttgaacgaactttgaagaagctagtttctgggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagcagggaaaaccccaacagaagctgcggctgctgttgttgaagattatgggctgccactgtcaacagatgaatttctttcgcaattttacccaatgctgtctgaccagtggcgcaatatcaaagctgttccaggggccaatcgattgattaaccatttgaggggtcatggtgtacccatggcattggcgtccaattcttctagatctaacatagaggccaaaatttttcatcatgcaggatggacagaatccttctcagctatcgtnggaggagacgaagtgaaagctggaaagccatctccgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="128695" stop="132093"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129003" g_stop="129060" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="71" r_length="58" r_score="0.879"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129061" i_stop="129663" i_length="603">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.549" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129664" g_stop="129773" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="72" r_stop="183" r_length="112" r_score="0.945"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130371" g_stop="130557" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="370" r_length="187" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="501" r_length="131" r_score="0.962"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="0.94"/>
            <acceptor a_prob="0.991" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131728" g_stop="131793" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="567" r_length="66" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E562455" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="0.974" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E562455" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129003" e_stop="129060"/>
          <exon e_start="129664" e_stop="129773"/>
          <exon e_start="130371" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131793"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCAT-GTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCT-GGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGG</genome_strand>
        <mrna_strand>TGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTTATAGCATTATCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGTTTCTGTGTGGTAGATAATTGCTCTCCATGGTCTGTTGAACGAACTTTGAAGAAGCTAGTTTCTGGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGCAGGGAAAACCCCAACAGAAGCTGCGGCTGCTGTTGTTGAAGATTATGGGCTGCCACTGTCAACAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTGTTCCAGGGGCCAATCGATTGATTAACCATTTGAGGGGTCATGGTGTACCCATGGCATTGGCGTCCAATTCTTCTAGATCTAACATAGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGACAGAATCCTTCTCAGCTATCGTNGGAGGAGACGAAGTGAAAGCTGGAAAGCCATCTCCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E567464" ref_strand="+" ref_description="SGN-E567464 [11594]">
      <seq>cttcatcttctcagttcaataatcaattggtgaagttggatttatagcattatcagataattgctctccatggtctgttgaacgaactttgaagaagctagtttctggtgtcatccttggatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagcaggggaaaaccccaacagaagctgcggctgctgttgttgaagattatgggctgccactgtcaacagatgaatttctttcgcaattttacccaatgctgtctgaccagtggcgcaatatcaaagctgttccaggggccaatcgattgattaaccatttgaggggtcatggtgtacccatgngcattggcgtcaaattcttctagatctaacatagaggccaaaatttttcatcatgcaggatggaaagaatccttctcaggctattgttggaggagacgaagtgaaagctggaaagccatctccggaaatatttcttgaagcagctaaaagactcaacatgggatccatccagctttcttgtccattgaagattcaataccaggtgttactgctggtaagcgctgctggaatggcaagtagttgctgtaccatctcttggcaaagcagtctcatctttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="128705" stop="132881"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129005" g_stop="129060" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="0.875"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129061" i_stop="129684" i_length="624">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.976" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129685" g_stop="129773" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="147" r_length="91" r_score="0.944"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130371" g_stop="130557" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="335" r_length="188" r_score="0.963"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="467" r_length="132" r_score="0.954"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131728" g_stop="131797" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="538" r_length="71" r_score="0.929"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91">
            <donor d_prob="0.968" d_score="0.96"/>
            <acceptor a_prob="0.686" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="131889" g_stop="131954" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="606" r_length="68" r_score="0.939"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="131955" i_stop="132502" i_length="548">
            <donor d_prob="0.991" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="132503" g_stop="132581" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="607" r_stop="688" r_length="82" r_score="0.899"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E567464" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E567464" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129005" e_stop="129060"/>
          <exon e_start="129685" e_stop="129773"/>
          <exon e_start="130371" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131797"/>
          <exon e_start="131889" e_stop="131954"/>
          <exon e_start="132503" e_stop="132581"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCAT-GTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTT-GATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTA-GGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATG-GCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCA-GCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACAT-GGATCCATCCAGCTTTCTTGT-CATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAA-AGATGCTGGAATGGC-AGTAGTTGCTGTACCATCTCTT-GCAAAGCAGTCTCATCTTTAT</genome_strand>
        <mrna_strand>CTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTTATAGCATTATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCTCTCCATGGTCTGTTGAACGAACTTTGAAGAAGCTAGTTTCTGGTGTCATCCTTGGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGCAGGGGAAAACCCCAACAGAAGCTGCGGCTGCTGTTGTTGAAGATTATGGGCTGCCACTGTCAACAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTGTTCCAGGGGCCAATCGATTGATTAACCATTTGAGGGGTCATGGTGTACCCATGNGCATTGGCGTCAAATTCTTCTAGATCTAACATAGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAATCCTTCTCAGGCTATTGTTGGAGGAGACGAAGTGAAAGCTGGAAAGCCATCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGGATCCATCCAGCTTTCTTGTCCATTGAAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAGCGCTGCTGGAATGGCAAGTAGTTGCTGTACCATCTCTTGGCAAAGCAGTCTCATCTTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E469217" ref_strand="+" ref_description="SGN-E469217 [cSTB-10-J16]">
      <seq>cttcatcttctcagttcaataatcaattggttaagttggatttatagcattatcaggtatctgtttctgtgtggtagataattgctctccatgtctgttgaacgaactttgaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaagctgcggctgctgttgttgaagattatgggctgccactgtcaacagatgaatttctttcgcaattttacccaatgctgtctgaccagtggcgcaatatcaaagctgttccaggggccaatcgattgattaaccatttgaggggtcatggtgtacccatggcattggcgtcaaattcttctagatctaacatagaggccaaaatttttcatcatgcaggatggaaagaatccttctcagcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="128705" stop="131905"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129005" g_stop="129060" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="0.857"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129061" i_stop="129663" i_length="603">
            <donor d_prob="0.000" d_score="0.84"/>
            <acceptor a_prob="0.549" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129664" g_stop="129773" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="166" r_length="110" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="130371" g_stop="130557" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="353" r_length="187" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="484" r_length="131" r_score="0.969"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131728" g_stop="131751" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="508" r_length="24" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E469217" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E469217" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129005" e_stop="129060"/>
          <exon e_start="129664" e_stop="129773"/>
          <exon e_start="130371" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131751"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACATCATTTAGCTTATTTTATTGATTGGTGATGCAAATTAGCTGATCGTATGTAGAATTTTGTTATTTCAATGTTCAATAATCAATTTGGTTGTTATCCTTGTCACTTCCTGTTTTAAGTTCATTCAGTGATCATTTAATCAAGTTCCCTAAAATTTTTCATGCTTCTCTTGTTTGTTTGAGGCTTTATTTTCTCATGTTATCTCAACCACATAGACAGTAAACGTATTTCTAGAAACTTCCGATCATAGTCCTTAGCGCCCTCTATGGAAGAGCTAAAAGTCTGGCTATGAGAGCGAAAAACTAATACAATTATACAGTTTTGATGACCAGGAAAGTTAAAATGAAATCCAAGTAATAGTAGTTTTGGTTCTGTTGTAATCCATATTAATCGGTTTCATTCCGACAATCTTAGGTGGTTAGCTTGGGCGTTAATGGTATTTTATATTCATAATACATTGTCTAATGACAATCTTCCTTACTTGAATCATGATAAATTGATATTGTATATTGATTTTTATGGTTTACATTTGACTTCAAGATTAAATTCATGTATTTGGATTAATTATTGTGCAAGTATATCTCATATTCACATAACATGAACATAGGTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTA</genome_strand>
        <mrna_strand>CTTCATCTTCTCAGTTCAATAATCAATTGGTTAAGTTGGATTTATAGCATTATCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCTGTTTCTGTGTGGTAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTGAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCGGCTGCTGTTGTTGAAGATTATGGGCTGCCACTGTCAACAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTGTTCCAGGGGCCAATCGATTGATTAACCATTTGAGGGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAGATCTAACATAGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAATCCTTCTCAGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E584184" ref_strand="+" ref_description="SGN-E584184 [10005]">
      <seq>tggtgaagttggatttatagcattatcaggtatctgtatctgtgtggtagataattgctctccatgtctgttgaacgaactttgaagaagctagtttctggtgtcatccttgatttggatggtacacttcttaatacagatggcattgtgagtgagattttaaaggttctcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagcacggaaaacccctacagaagctgcggctgctgttgttgaagattatgggctgccactgtcaacagatgaatttctttcgcaattttacccaatgctgtctgaccagtggcgcaatatcaaagctgttccaggggccaatcgattgattaaccatttgaggggtcatggtgtacccatggcattggcgtcaaagttcttctatatctaacatagaggccagagtttttcatcatgcaggatggaaagaatccttctcagctattgttggaggagacgaagtgaaagctggaaagccatctccggaaatatttcttgaagcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="129354" stop="132099"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129664" g_stop="129773" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="139" r_length="110" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="130371" g_stop="130557" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="326" r_length="187" r_score="0.957"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="458" r_length="132" r_score="0.939"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="0.88"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131728" g_stop="131797" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="528" r_length="70" r_score="0.957"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91">
            <donor d_prob="0.968" d_score="0.96"/>
            <acceptor a_prob="0.686" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131889" g_stop="131903" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="543" r_length="15" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E584184" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E584184" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129664" e_stop="129773"/>
          <exon e_start="130371" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131797"/>
          <exon e_start="131889" e_stop="131903"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAA-TTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGC</genome_strand>
        <mrna_strand>GTATCTGTATCTGTGTGGTAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTGAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTCTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGCACGGAAAACCCCTACAGAAGCTGCGGCTGCTGTTGTTGAAGATTATGGGCTGCCACTGTCAACAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTGTTCCAGGGGCCAATCGATTGATTAACCATTTGAGGGGTCATGGTGTACCCATGGCATTGGCGTCAAAGTTCTTCTATATCTAACATAGAGGCCAGAGTTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAATCCTTCTCAGCTATTGTTGGAGGAGACGAAGTGAAAGCTGGAAAGCCATCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E569374" ref_strand="+" ref_description="SGN-E569374 [13802]">
      <seq>ttggatttatagcattatcaggtatctgtttctgtgtggtagataattgctctccatgtctgttgaacgaactttgaagaagctagtttccggtgtcatcctttgatttggatggtacacttcttaaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagcagggaaaaccccaacagaagctgcggctgctgttgttgaagattatgggctgccactgtcaacagatgaatttctttcgcaattttacccaatgctgtctgaccagtaataaaccagcaaacatagtttcatttccttcctgtttattgattaagcttatacaaactgaaattgaatagcctgttggaagattattcgccttaaaatattagtaggcagactcttttcctcacatcctattaatggatgttgaaggataaagttacaaagtaaaaaccttctgctcttttatagctagagcatggatgataaatttgcaaggctagttagtaagaaaagagtatggagaacatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="129354" stop="131105"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129664" g_stop="129773" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="133" r_length="112" r_score="0.936"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="130371" g_stop="130807" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="570" r_length="437" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E569374" ref_strand="+">
        <total_alignment_score>0.927</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E569374" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129664" e_stop="129773"/>
          <exon e_start="130371" e_stop="130807"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCC-TTGATTTGGATGGTACACTTCTT-AATACAGGTCAGTAGTACTCTTCGTGTTTTGACTTTACACTTCTCAAATTATATTCTTGGCCGTTCACCTAAATCATTCATGGTATTAGTTCTTGATATATGAACTACTACTTTTAATATTCAAAAGCATTTTCTAGAGTTCCTTTCATTTCCTTCCAACTTTTACATATCCAATAGAACTATGAAATTACCAGAATTTTTTGAATATTTGGATGCATATATTTACAATTTGATTTTTGTTACTGCTGTAATCTTTATTCTAAGTGTAGGTTATATCATTGCAGTATAATTGTTTTATCCTTTCAAATTTCTCTAATCAAACTCTATTGTCTGAGGACATACTTAATATGAGGTCTCTGTAAGCTTAGTGGGCCTGCAGCTATTTCGAAATTCGATTCCGAAACTTGAGAAGTACTCTGGCAATCAAGTCTCAAGTATGAACAACTTACAACTATGAAGTCCTCTTTATGCAAAAGAAATTTGGATCTAGGCATTCTGTTATAGAGTTAACTGCAGCACAGTGTCAATCCTTATATTACCAATGTCTTGCGTTTCTTTATAGTTTCAGGTTTCCAATGTTAATTTGATCTCTTTGTTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAA-TTGCAA-GCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAG</genome_strand>
        <mrna_strand>GTATCTGTTTCTGTGTGGTAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTGAAGAAGCTAGTTTCCGGTGTCATCCTTTGATTTGGATGGTACACTTCTTAAATACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGCAGGGAAAACCCCAACAGAAGCTGCGGCTGCTGTTGTTGAAGATTATGGGCTGCCACTGTCAACAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGACCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTCCTGTTTATTGATTAAGCTTATACAAACTGAAATTGAATAGCCTGTTGGAAGATTATTCGCCTTAAAATATTAGTAGGCAGACTCTTTTCCTCACATCCTATTAATGGATGTTGAAGGATAAAGTTACAAAGTAAAAACCTTCTGCTCTTTTATAGCTAGAGCATGGATGATAAATTTGCAAGGCTAGTTAGTA-AGAAAAGAG-TATGGAGAACATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E273774" ref_strand="+" ref_description="SGN-E273774 [cLEN-7-F13]">
      <seq>ttaatacagatggcattgtgagtgagattttaaaggttttcttagttaagtatggaaagcaatgggatgggagagaagctccccacatagtagggaaaaccccaacagaaactgctgctgccgttgttgaaaattatgggctgccactgtcaagagatgaatttctttcccaattttacccaatgctgtctgatcaatggcgcagtatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctcaatctaacattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="130067" stop="131877"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="130362" g_stop="130557" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="196" r_length="196" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="0.98"/>
            <acceptor a_prob="0.996" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="131470" g_stop="131577" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="197" r_stop="304" r_length="108" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E273774" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>304</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273774" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="130362" e_stop="130557"/>
          <exon e_start="131470" e_stop="131577"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGA</genome_strand>
        <mrna_strand>TTAATACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAACTGCTGCTGCCGTTGTTGAAAATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCCCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCGCAGTATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTCAATCTAACATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E703408" ref_strand="+" ref_description="SGN-E703408 [FA21BF08]">
      <seq>agagaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagccgtctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaataccaggtgttactgctggtaaagatgctggaatggcagtagttgctgtaccatctcttgcaaagcagtctcatctttatacctctgctgatgaagtgatcaattctcttctagatttgcaactagaaaagtggggactacctgcatttcaagataggatagaaggtactttgcctttagaaccttggtatataggtggtcctgtcattaagggatttgggcgcggctcaaaggttctcgggatccccacagctaatttatccccacaaggttattcagccattctttcagaacatccagcgggtgtatattttggatgggcaggactatcaggtcgaggtgtctacaagatggtcatgagcattggttggaatcctttcttcaacaatacagagaagacggttgaaccatggttgcttcatgacttcaatgaggacttctatggtgaggaattgcatctagttgttgtgggctacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="130133" stop="133716"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="130433" g_stop="130557" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="256" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="131728" g_stop="131797" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="326" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131889" g_stop="131954" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="392" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131955" i_stop="132502" i_length="548">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="132503" g_stop="132657" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="547" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="132658" i_stop="132742" i_length="85">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="132743" g_stop="132838" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="548" r_stop="643" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="132839" i_stop="133116" i_length="278">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="133117" g_stop="133265" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="644" r_stop="795" r_length="152" r_score="0.960"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="133266" i_stop="133342" i_length="77">
            <donor d_prob="0.575" d_score="0.87"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="133343" g_stop="133416" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="796" r_stop="869" r_length="74" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E703408" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>866</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E703408" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="130433" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131797"/>
          <exon e_start="131889" e_stop="131954"/>
          <exon e_start="132503" e_stop="132657"/>
          <exon e_start="132743" e_stop="132838"/>
          <exon e_start="133117" e_stop="133265"/>
          <exon e_start="133343" e_stop="133416"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATAGTAAGTCTTTATGACTGCTTTACTTGTATGACGTGTAGTCATGTACTTGATTTCTCTTCCAATTTTTGACTGGAAGCATATGCAGGGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTC-AC-ATACAGAG-AGACGGTTGTAAGTGTGTCGTGACATATGTTTCTTCTGTATTCTTGACTTCTTTGGTGTTTGTTGAAAGACAACTTTACTTTTAGGAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACAT</genome_strand>
        <mrna_strand>AGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA.....................................................................................GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAG......................................................................................................................................................................................................................................................................................CTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTT.............................................................................GAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E214154" ref_strand="+" ref_description="SGN-E214154 [cLEC-77-A5]">
      <seq>gaagctccccacatagtagggaaaaccccaacagaagctgctgctgccgttgttgaagattatgggctgccactgtcaagagatgaatttctttcgcaattttacccaatgctgtctgatcagtggcgcaatatcaaagctcttccaggggccaatcgattgattaaccatttgagcggtcatggtgtacccatggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagccgtctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaataccaggtgttactgctggtaaagatgctggaatggcagtagttgctgtaccatctcttgcaaagcagtctcatctttatacctctgctgatgaagtgatcaattctcttctagatttgcaactagaaaagtggggactacctgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="130136" stop="132947"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="130436" g_stop="130557" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="253" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="131728" g_stop="131797" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="323" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131889" g_stop="131954" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="389" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131955" i_stop="132502" i_length="548">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="132503" g_stop="132647" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="390" r_stop="534" r_length="145" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E214154" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E214154" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="130436" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131797"/>
          <exon e_start="131889" e_stop="131954"/>
          <exon e_start="132503" e_stop="132647"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCA</genome_strand>
        <mrna_strand>GAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E406182" ref_strand="+" ref_description="SGN-E406182 [PPI-3-C1]">
      <seq>cccaacagaagctgcggctgctgttgttgaagattatgggctgccactgtcaacagatgaatttctttcgcaattttacccaatgctgtctgaccagtggcgcaatatcaaagctgttccaggggccaatcgattgattaaccatttgaggggtcatggtgtacccatggcattggcgtcaaattcttctagatctaacatagaggccaaaatttttcatcatgcaggatggaaagaatccttctcagctattgttggaggagacgaagtgaaagctggaaagccatctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaataccaggtgttactgctggtaaggctgctggaatggcagtagttgctgtaccatctcttgcaaagcagtctcatctttatacttctgctgatgaagtgatcaattctcttctagatttgcaactagaaaagtggggactacctgcatttcaagataggatggaaggtactttgcctttagaaccttggtgtattggtggtcctgtcattaagggatttgggcgcggctcanaggttcttcgggatccccacagctaatttatccccagaaggttattcagccattctttcagaaacatcagcgggtgtatattttggatgggcaggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="130162" stop="133491"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="130462" g_stop="130557" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="227" r_length="131" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="131728" g_stop="131797" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="297" r_length="70" r_score="0.957"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91">
            <donor d_prob="0.968" d_score="0.96"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131889" g_stop="131954" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="363" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131955" i_stop="132502" i_length="548">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="132503" g_stop="132657" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="518" r_length="155" r_score="0.981"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="132658" i_stop="132742" i_length="85">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="132743" g_stop="132838" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="519" r_stop="615" r_length="97" r_score="0.938"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="132839" i_stop="133116" i_length="278">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.935" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="133117" g_stop="133191" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="616" r_stop="690" r_length="75" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E406182" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>689</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E406182" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="130462" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131797"/>
          <exon e_start="131889" e_stop="131954"/>
          <exon e_start="132503" e_stop="132657"/>
          <exon e_start="132743" e_stop="132838"/>
          <exon e_start="133117" e_stop="133191"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATAGTAAGTCTTTATGACTGCTTTACTTGTATGACGTGTAGTCATGTACTTGATTTCTCTTCCAATTTTTGACTGGAAGCATATGCAGGGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTC-TCGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGAC</genome_strand>
        <mrna_strand>CCCAACAGAAGCTGCGGCTGCTGTTGTTGAAGATTATGGGCTGCCACTGTCAACAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTGTTCCAGGGGCCAATCGATTGATTAACCATTTGAGGGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAGATCTAACATAGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAATCCTTCTCAGCTATTGTTGGAGGAGACGAAGTGAAAGCTGGAAAGCCATCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAGGCTGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACTTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA.....................................................................................GGATGGAAGGTACTTTGCCTTTAGAACCTTGGTGTATTGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCANAGGTTCTTCGGGATCCCCACAG......................................................................................................................................................................................................................................................................................CTAATTTATCCCCAGAAGGTTATTCAGCCATTCTTTCAGAAACATCAGCGGGTGTATATTTTGGATGGGCAGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E602832" ref_strand="+" ref_description="SGN-E602832 [55906]">
      <seq>tgcggctgctgttgttgaagattatgggctgccactgtcaacagatgaatttctttcgcaattttacccaatgctgtctgaccagtggcgcaatatcaaagctgttccaggggccaatcgattgattaaccatttgaggggtcatggtgtacccatggcattggcgtcaaattcttctagatctaacatagaggccaaaatttttcatcatgcaggatggaaagaatccttctcagctattgttggaggagacgaagtgaaagctggaaagccatctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaataccaggtgttactgctggtaaggctgctggaatggcagtagttgctgtaccatctcttgcaaagcagtctcatctttatacttctgctgatgaagtgatcaattctcttctagatttgcaactagaaaagtggggactacctgcatttcaagataggatggaaggtactttgcctttagaaccttggtgtattggtggtcctgtcattaagggatttgggcgcgggtcaaaggttctcgggatccccacaaggtaaatttatccccagaaggttattcagccatttctttcagaacatcagggggtgtata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="130174" stop="133474"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="130474" g_stop="130557" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912">
            <donor d_prob="0.764" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="131470" g_stop="131600" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="215" r_length="131" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="131728" g_stop="131797" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="285" r_length="70" r_score="0.957"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91">
            <donor d_prob="0.968" d_score="0.96"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="131889" g_stop="131954" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="351" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="131955" i_stop="132502" i_length="548">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="132503" g_stop="132657" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="506" r_length="155" r_score="0.981"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="132658" i_stop="132742" i_length="85">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="132743" g_stop="132838" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="603" r_length="97" r_score="0.938"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="132839" i_stop="133116" i_length="278">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.935" a_score="0.85"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="133117" g_stop="133174" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="604" r_stop="662" r_length="59" r_score="0.862"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E602832" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E602832" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="130474" e_stop="130557"/>
          <exon e_start="131470" e_stop="131600"/>
          <exon e_start="131728" e_stop="131797"/>
          <exon e_start="131889" e_stop="131954"/>
          <exon e_start="132503" e_stop="132657"/>
          <exon e_start="132743" e_stop="132838"/>
          <exon e_start="133117" e_stop="133174"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAGTCCTGCAGTGTTTGTTCTGCTTAAAACCCTTACAAAAAAGTATGTAGGTACTGGATAGTAATTAATATTGTGGAGAATTACTAAACGGGGAACCACTCATTTTGTTCTCCAATTTAGAAAATGCAAATATTCTTGTTTCTTTCTTTCATTTATCTTCTTTGCTTTTGGTGATAAAAATAGATATCCAATGAAGAGCAAAGAAAAAAAGAGGCAAGCAAGAACGGAACAACTACATTAACTTATCAAAAAGAGATAACTACATTTTGTTTATTAGTTGATCATCTGTGTCTTGTATGTCAAACTTGTTTTTTAAAATTTAAATGGAGTGAATTTCCCTTTTTTTCTTTTGTTCATCTGTTTCATTTTGGGGTAGGGGGAGAGGAGGGGAAGGGGTAGAAGCTCTGGAAGGACTAAGAGTGATATACTCATCTATGGCCTTGTTGGTTTAAGGAAGATGATTTCATTCAATCTTGCTGAGAGTGGAAGCAATGTTGGATTGGTGTTACCTTTTTCTTTTCTTTGAGCTAGTAAAACTCTGATTATCTTTTGACTGTTTGCGAGATCTTGTGATGTACAATTATGTAACTTGTATATCTATTCTCTTCTGCATATACATTCCAGTTCAAAGTTCTTATAAAATTTTGTCAATCAATTTGGTATAGGTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATAGTAAGTCTTTATGACTGCTTTACTTGTATGACGTGTAGTCATGTACTTGATTTCTCTTCCAATTTTTGACTGGAAGCATATGCAGGGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCAC-AGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCT-AATTTATCCCCACAAGGTTATTCAGCCA-TTCTTTCAGAACATCCAGCGGGTGTATA</genome_strand>
        <mrna_strand>TGCGGCTGCTGTTGTTGAAGATTATGGGCTGCCACTGTCAACAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCGCAATATCAAAGCTGTTCCAGGGGCCAATCGATTGATTAACCATTTGAGGGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAGATCTAACATAGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAATCCTTCTCAGCTATTGTTGGAGGAGACGAAGTGAAAGCTGGAAAGCCATCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAGGCTGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACTTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA.....................................................................................GGATGGAAGGTACTTTGCCTTTAGAACCTTGGTGTATTGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGGTCAAAGGTTCTCGGGATCCCCACAAG......................................................................................................................................................................................................................................................................................GTAAATTTATCCCCAGAAGGTTATTCAGCCATTTCTTTCAGAACAT-CAGGGGGTGTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E440226" ref_strand="+" ref_description="SGN-E440226 [cSTA-15-P22]">
      <seq>gccaatcgattgattaaccatttgaggggtcatggtgtacccatggcattggcgtcaaattcttctagatctaacatagaggccaaaatttttcatcatgcaggatggaaagaatccttctcagctattgttggaggagacgaagtgaaagctggaaagccatctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaataccaggtgttactgctggtaaggctgctggaatggcagtagttgctgtaccatctcttgcaaagcagtctcatctttatacttctgctgatgaagtgatcaattctcttctagatttgcaactagaaaagtggggacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="131198" stop="132941"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131498" g_stop="131600" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127">
            <donor d_prob="0.602" d_score="0.96"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="131728" g_stop="131797" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="173" r_length="70" r_score="0.957"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91">
            <donor d_prob="0.968" d_score="0.96"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="131889" g_stop="131954" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="239" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="131955" i_stop="132502" i_length="548">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="132503" g_stop="132641" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="378" r_length="139" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E440226" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>378</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E440226" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131498" e_stop="131600"/>
          <exon e_start="131728" e_stop="131797"/>
          <exon e_start="131889" e_stop="131954"/>
          <exon e_start="132503" e_stop="132641"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTA</genome_strand>
        <mrna_strand>GCCAATCGATTGATTAACCATTTGAGGGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAGATCTAACATAGAGGCCAAAATTTTTCATCATGCAG...............................................................................................................................GATGGAAAGAATCCTTCTCAGCTATTGTTGGAGGAGACGAAGTGAAAGCTGGAAAGCCATCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAGGCTGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACTTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E243460" ref_strand="+" ref_description="SGN-E243460 [cLED-34-O14]">
      <seq>tggcattggcgtcaaattcttctaaatctaacattgaggccaaaatttttcatcatgcaggtagagttctaacatgtattgctagagaggtatttctttccttaggaaggtattttgtgccagtccagcatgtaagatggcatttatgcttggtgctttgattgggatagtctttattttttttcaggatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagccgtctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaatatttgcaactagaaaaggggggactacctgcatttcaagataggatagaaggtactttgcctttagaaccttggtata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="131241" stop="133078"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131541" g_stop="131797" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="257" r_length="257" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="131889" g_stop="131954" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="323" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="131955" i_stop="132615" i_length="661">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="132616" g_stop="132657" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="365" r_length="42" r_score="0.976"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="132658" i_stop="132742" i_length="85">
            <donor d_prob="0.903" d_score="0.98"/>
            <acceptor a_prob="0.905" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="132743" g_stop="132778" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="366" r_stop="401" r_length="36" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E243460" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243460" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131541" e_stop="131797"/>
          <exon e_start="131889" e_stop="131954"/>
          <exon e_start="132616" e_stop="132657"/>
          <exon e_start="132743" e_stop="132778"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATAGTAAGTCTTTATGACTGCTTTACTTGTATGACGTGTAGTCATGTACTTGATTTCTCTTCCAATTTTTGACTGGAAGCATATGCAGGGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATA</genome_strand>
        <mrna_strand>TGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGCAACTAGAAAAGGGGGGACTACCTGCATTTCAAGATA.....................................................................................GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E264355" ref_strand="+" ref_description="SGN-E264355 [cLEG-67-E17]">
      <seq>gatggaaagagtccttctcagctattgttggaggagatgaagtgaaagctggaaagccgtctccggaaatatttcttgaagcagctaaaagactcaacatggatccatccagctttcttgtcattgaagattcaataccaggtgttactgctggtaaagatgctggaatggcagtagttgctgtaccatctcttgcaaagcagtctcatctttatacctctgctgatgaagtgatcaattctcttctagatttgcaactagaaaagtggggactacctgcatttcaagataggata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="131428" stop="132960"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131728" g_stop="131797" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="131889" g_stop="131954" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="136" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="131955" i_stop="132502" i_length="548">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="132503" g_stop="132657" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="291" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="132658" i_stop="132742" i_length="85">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.905" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="132743" g_stop="132747" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="296" r_length="5" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E264355" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>296</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264355" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131728" e_stop="131797"/>
          <exon e_start="131889" e_stop="131954"/>
          <exon e_start="132503" e_stop="132657"/>
          <exon e_start="132743" e_stop="132747"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAATGTAAAACTTGATGAATTGATTATCTTTGTCCTCCACATTTCATAATCTGGTATTCTGGATGTTAAATTAACTTAATATCTTCTTTTGTAAGATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAATGTGAGTTTTTATCTTCAAAACTTTTGTAGCGGTATGTAGGAAAATCTAACTACTGGTCAAAAGAAGAAAAAAAGAAATGTGCCTGTCGGCTAGATAAGCAGCATGGTTGACTCTAGCTACTAACTTGTGACATCATAATTTACAATTCGGAAAAGGGCCAAAAATACCCTTAGACTATTTGAAAAGGTTCAATGTTACCCCTCATCCACCTATTGGGTTAAAAATACCCCTCAATCCACCTATTTGGTTTGTTTCTACCCTTAAAACTAACAACCTTTTAAAAAAAATTATTATTATTATCACTTATTATTTTTCTTTTTTATTGGATAAATCAAATCCCAACCTATTTAATTTTTTCCTACCCACCCATTTTAGTGTCCATGACCCAAACTCAATTAGAAGAGTTAAAATAACTTGTCATTGCTTTTGCATTTTCTAGGCTGAATATGAACTTTTTTTCTCTCCCAAGAGCATATTATTTTGAATTGGATGTAAATTATTTTATCTCATAACTTAGTGAGAGTAACTCGACCAGATACATATGTTAGACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATAGTAAGTCTTTATGACTGCTTTACTTGTATGACGTGTAGTCATGTACTTGATTTCTCTTCCAATTTTTGACTGGAAGCATATGCAGGGATA</genome_strand>
        <mrna_strand>GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT...........................................................................................ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA.....................................................................................GGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E236449" ref_strand="+" ref_description="SGN-E236449 [cLED-13-L5]">
      <seq>cgggatccccacaggtatgcggtcttctttattccttctgctgaatggctaaaataaatgcttgactcgttatctgtgtatacttgaaatgacttgagaatttctcagaagtttgttattggaatttcagtttcttgtgagcctgtcatatcagagatattgatttttatgtcaaattattatctggattcgaactccaattgttggaggggcatggaagattagtatcttgcctcgtatgacttaacagtgatgtgtttttctattcttatggggtcaatattcttttcagctaatttatccccacaaggttattcagccattctttcagaacatccagcgggtgtatattttggatgggcaggactatcaggtcgaggtgtctacaagatggtcatgagcattggttggaatcctttcttcaacaatacagagaagacggttgtaagtgtgtcgggacatatgtttcttctgtattcttgacttctttggtgtttgttgaaagacaactttacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="132525" stop="133639"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132825" g_stop="133339" g_length="515"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="518" r_length="518" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E236449" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E236449" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="132825" e_stop="133339"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTC-AC-ATACAGAG-AGACGGTTGTAAGTGTGTCGTGACATATGTTTCTTCTGTATTCTTGACTTCTTTGGTGTTTGTTGAAAGACAACTTTACTTT</genome_strand>
        <mrna_strand>CGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGGGACATATGTTTCTTCTGTATTCTTGACTTCTTTGGTGTTTGTTGAAAGACAACTTTACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E235635" ref_strand="+" ref_description="SGN-E235635 [cLED-15-M1]">
      <seq>cgggatccccacaggtatgcggtcttctttattccttctgctgaatggctaaaataaatgcttgactcgttatctgtgtatacttgaaatgacttgagaatttctcagaagtttgttattggaatttcagtttcttgtgagcctgtcatatcagagatattgatttttatgtcaaattattatctggattcgaactccaattgttggaggggcatggaagattagtatcttgcctcgtatgacttaacagtgatgtgtttttctattcttatggggtcaatattcttttcagctaatttatccccacaaggttattcagccattctttcagaacatccagcgggtgtatattttggatgggcaggactatcaggtcgaggtgtctacaagatggtcatgagcattggttggaatcctttcttcaacaatacagagaagacggttgtaagtgtgtcgtgacatatgtntcttctgtattcttgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="132525" stop="133605"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132825" g_stop="133305" g_length="481"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="484" r_length="484" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E235635" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E235635" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="132825" e_stop="133305"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTC-AC-ATACAGAG-AGACGGTTGTAAGTGTGTCGTGACATATGTTTCTTCTGTATTCTTGAC</genome_strand>
        <mrna_strand>CGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGTGACATATGTNTCTTCTGTATTCTTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E231386" ref_strand="+" ref_description="SGN-E231386 [cLED-10-L5]">
      <seq>cgggatccccacaggtatgcgggcttctttattccttctgctgaatggctaaaataaatgcttgactcgttatctgtgtatacttgaaatgacttgagaatttctcagaagtttggtattggaatttcaatttcttgtgagcctgtcatatcaaagatattgatttttatgtcaaattattatctggattcgaactccaattgttggaggggcatggaagattagtatcttgcctcgcatgacttaacagtgatgtgtttttctattcttatggggtcaatattcttttcagctaatttatccccacaaggttattcagccattctttcagaacatccagcgggtgtatattttggatgggcaggactatcatgtcgaggtgtctacaagatggtcatgagcattggttggaatcctttcttcaacaatacagagaagacggttgtaagtgtgtcgngacatatgtttcttctgtattct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="132525" stop="133601"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132825" g_stop="133301" g_length="477"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="480" r_length="480" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E231386" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>477</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E231386" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="132825" e_stop="133301"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTC-AC-ATACAGAG-AGACGGTTGTAAGTGTGTCGTGACATATGTTTCTTCTGTATTCT</genome_strand>
        <mrna_strand>CGGGATCCCCACAGGTATGCGGGCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGGTATTGGAATTTCAATTTCTTGTGAGCCTGTCATATCAAAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGCATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCATGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCAACAATACAGAGAAGACGGTTGTAAGTGTGTCGNGACATATGTTTCTTCTGTATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E238443" ref_strand="+" ref_description="SGN-E238443 [cLED-17-J18]">
      <seq>cggaaacccctattgaagctgtagaagagaaaccatcggaagaaccttacccttggccggttattcagtatgatgttccgccgtatctaacctatcatttcttcaatcagttcaggacgccttcaaaccctaataatttcttaaagggtgtcaaatggtctcctgatggttctggtttcctcacttgctctgatgataataccttttgtttatataacttgccatatgatgaaagtggacagcttgctgatttttcctcatcagctgctgatacagattcgtatgctgcaagtcttgtcatgagtgacggggagtctgtatatgactattgctggtatccctatatgtcttcttcaagtccagagacatgtgtttttgcaagtactacccgtgatcaccctattcatctctgggatgctactactggacagttacgttgtacataccgtgcttatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="134161" stop="136221"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="134461" g_stop="134617" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="157" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="134618" i_stop="134719" i_length="102">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="134720" g_stop="134782" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="220" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="134783" i_stop="135269" i_length="487">
            <donor d_prob="0.672" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="135270" g_stop="135325" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="276" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="135326" i_stop="135505" i_length="180">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="135506" g_stop="135586" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="357" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="135587" i_stop="135667" i_length="81">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="135668" g_stop="135741" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="431" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="135742" i_stop="135894" i_length="153">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="135895" g_stop="135921" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="458" r_length="27" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E238443" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>458</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E238443" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="134461" e_stop="134617"/>
          <exon e_start="134720" e_stop="134782"/>
          <exon e_start="135270" e_stop="135325"/>
          <exon e_start="135506" e_stop="135586"/>
          <exon e_start="135668" e_stop="135741"/>
          <exon e_start="135895" e_stop="135921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGAAACCCCTATTGAAGCTGTAGAAGAGAAACCATCGGAAGAACCTTACCCTTGGCCGGTTATTCAGTATGATGTTCCGCCGTATCTAACCTATCATTTCTTCAATCAGTTCAGGACGCCTTCAAACCCTAATAATTTCTTAAAGGGTGTCAAATGGTATGCTTTTCTCCTCTTTTTGATTCTCCATTTCTTATGCCGTGTTTTCTCTGTTTTTTCCCTATGTAGTCTAATGGCTATTTTTTTTTCCTGGAATTATAGGTCTCCTGATGGTTCTGGTTTCCTCACTTGCTCTGATGATAATACCTTTTGTTTATATAACTTGTAAGTTTCTTCCCAGTTTCTGATGATAAATGATAAATTTCTTTGTAGGAGCAAATTAGAAATATATGAATTCGAAGTCTCGAATAACTGTTAAGCTTATATGAGTAGCTTCTCTTGTAACTTTTTGGTGATTGGATCTGCTGGGATTAAAATTTATTGACAGATAGAGTTTCATTTAACTCTGCCTGTGTGATCTTAGCTTTCCGGTCAAAGCCTGGATATCGTGAGAAAGGTTGTGGTAGGTTGATAACTAGCATTAAAAATAGTCATGATATGATGAATCATCTAAACATAGAGGGGAATGGATATAGATAATTCATATAGACAGACTCAAGGAGTTTGTGATTGAGATACATTAATTCATTGACCAGATAGTGTTTGCTGGGCTGACTATGAGGCACAATGCTGATAGTAGAAAATGGTAGTTATTCTTGCATTTCCATTGTCCTTGAGTTGCTTTGTTAATTTGGCTCTGGTTCATTGATAGGCCATATGATGAAAGTGGACAGCTTGCTGATTTTTCCTCATCAGCTGCTGATACAGGTAATATATGCTACTAGTTTATATAGGTTTGAATGTGAAGTAACATTGTGGAAGTATGCTATAGTAGATTGCTTTCAGTGTTGGAATTTGTTGATCATGTGTGTTCAATATTGAACTTGATATGATTTTCTTTCTCCTGTTTTTGTTTATTTTGATTAAACACTGACTGTTTTTTTGCAGATTCGTATGCTGCAAGTCTTGTCATGAGTGACGGGGAGTCTGTATATGACTATTGCTGGTATCCCTATATGTCTTCTTCAAGTATGTCACTCGTCTTGTTATTTTGTTATAACGCTGATGGTGATTAGAAAAAAATAACTAGAATTTGCTTTAATGCCTTAGGTCCAGAGACATGTGTTTTTGCAAGTACTACCCGTGATCACCCTATTCATCTCTGGGATGCTACTACTGGACAGGTGTGTCATTGTCTTTAAAGCTGTTGCTAAAGATGCTTTTTCCTCTCACTGCTCTTTGAAAGGTGGCTAGCAGCCCACGACTTGTGACACTGCTCAATGAGCTTTGCTAGGAAGATATTCTTCCCTACATTATCTTTTCTTGGGTGATTGCAGTTACGTTGTACATACCGTGCTTATGAT</genome_strand>
        <mrna_strand>CGGAAACCCCTATTGAAGCTGTAGAAGAGAAACCATCGGAAGAACCTTACCCTTGGCCGGTTATTCAGTATGATGTTCCGCCGTATCTAACCTATCATTTCTTCAATCAGTTCAGGACGCCTTCAAACCCTAATAATTTCTTAAAGGGTGTCAAATG......................................................................................................GTCTCCTGATGGTTCTGGTTTCCTCACTTGCTCTGATGATAATACCTTTTGTTTATATAACTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATATGATGAAAGTGGACAGCTTGCTGATTTTTCCTCATCAGCTGCTGATACAG....................................................................................................................................................................................ATTCGTATGCTGCAAGTCTTGTCATGAGTGACGGGGAGTCTGTATATGACTATTGCTGGTATCCCTATATGTCTTCTTCAA.................................................................................GTCCAGAGACATGTGTTTTTGCAAGTACTACCCGTGATCACCCTATTCATCTCTGGGATGCTACTACTGGACAG.........................................................................................................................................................TTACGTTGTACATACCGTGCTTATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E367164" ref_strand="+" ref_description="SGN-E367164 [cLPT-5-J10]">
      <seq>ggttattcactatgatgttccgccgtatctaacctatcatttcttcaatcagttcaggacgccttcaaaccctaataatttcttaaagggtgtcaaatggtctcctgatggttctggtttcctcacttgctctgatgataataccttttgtttatataacttgccatatgatgaaagtggacagcttgctgatttttcctcatcagctgctgatacagattcgtatgctgcaagtcttgtcatgagtgacggggagtctgtatatgactattgctggtatccctatatgtcttcttcaagtccagagacgtgtgtttttgcaagtactacccgtgatcaccctattcatctctgggatgctactactggacagttacgctgtacataccgtgcttatgatgccatggacgagatcactgctgccttttcgattgccttcaatcccgcagggactaagatatttgctggttacaacaaatccataagaatatttgatattcatcggcctggcagagattttacccagcactccacccttcaaggaaataaagaagggcaatcaggcattatatcctcaatggctttctgtccaagccattcaaggttactggcaactggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="134219" stop="137181"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="134519" g_stop="134617" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="134618" i_stop="134719" i_length="102">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="134720" g_stop="134782" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="162" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="134783" i_stop="135269" i_length="487">
            <donor d_prob="0.672" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="135270" g_stop="135325" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="218" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="135326" i_stop="135505" i_length="180">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="135506" g_stop="135586" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="299" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="135587" i_stop="135667" i_length="81">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.686" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="135668" g_stop="135741" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="373" r_length="74" r_score="0.986"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="135742" i_stop="135894" i_length="153">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="135895" g_stop="135977" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="456" r_length="83" r_score="0.976"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="135978" i_stop="136444" i_length="467">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.634" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="136445" g_stop="136551" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="563" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="136552" i_stop="136824" i_length="273">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.447" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="136825" g_stop="136881" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="620" r_length="57" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E367164" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E367164" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="134519" e_stop="134617"/>
          <exon e_start="134720" e_stop="134782"/>
          <exon e_start="135270" e_stop="135325"/>
          <exon e_start="135506" e_stop="135586"/>
          <exon e_start="135668" e_stop="135741"/>
          <exon e_start="135895" e_stop="135977"/>
          <exon e_start="136445" e_stop="136551"/>
          <exon e_start="136825" e_stop="136881"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTATTCAGTATGATGTTCCGCCGTATCTAACCTATCATTTCTTCAATCAGTTCAGGACGCCTTCAAACCCTAATAATTTCTTAAAGGGTGTCAAATGGTATGCTTTTCTCCTCTTTTTGATTCTCCATTTCTTATGCCGTGTTTTCTCTGTTTTTTCCCTATGTAGTCTAATGGCTATTTTTTTTTCCTGGAATTATAGGTCTCCTGATGGTTCTGGTTTCCTCACTTGCTCTGATGATAATACCTTTTGTTTATATAACTTGTAAGTTTCTTCCCAGTTTCTGATGATAAATGATAAATTTCTTTGTAGGAGCAAATTAGAAATATATGAATTCGAAGTCTCGAATAACTGTTAAGCTTATATGAGTAGCTTCTCTTGTAACTTTTTGGTGATTGGATCTGCTGGGATTAAAATTTATTGACAGATAGAGTTTCATTTAACTCTGCCTGTGTGATCTTAGCTTTCCGGTCAAAGCCTGGATATCGTGAGAAAGGTTGTGGTAGGTTGATAACTAGCATTAAAAATAGTCATGATATGATGAATCATCTAAACATAGAGGGGAATGGATATAGATAATTCATATAGACAGACTCAAGGAGTTTGTGATTGAGATACATTAATTCATTGACCAGATAGTGTTTGCTGGGCTGACTATGAGGCACAATGCTGATAGTAGAAAATGGTAGTTATTCTTGCATTTCCATTGTCCTTGAGTTGCTTTGTTAATTTGGCTCTGGTTCATTGATAGGCCATATGATGAAAGTGGACAGCTTGCTGATTTTTCCTCATCAGCTGCTGATACAGGTAATATATGCTACTAGTTTATATAGGTTTGAATGTGAAGTAACATTGTGGAAGTATGCTATAGTAGATTGCTTTCAGTGTTGGAATTTGTTGATCATGTGTGTTCAATATTGAACTTGATATGATTTTCTTTCTCCTGTTTTTGTTTATTTTGATTAAACACTGACTGTTTTTTTGCAGATTCGTATGCTGCAAGTCTTGTCATGAGTGACGGGGAGTCTGTATATGACTATTGCTGGTATCCCTATATGTCTTCTTCAAGTATGTCACTCGTCTTGTTATTTTGTTATAACGCTGATGGTGATTAGAAAAAAATAACTAGAATTTGCTTTAATGCCTTAGGTCCAGAGACATGTGTTTTTGCAAGTACTACCCGTGATCACCCTATTCATCTCTGGGATGCTACTACTGGACAGGTGTGTCATTGTCTTTAAAGCTGTTGCTAAAGATGCTTTTTCCTCTCACTGCTCTTTGAAAGGTGGCTAGCAGCCCACGACTTGTGACACTGCTCAATGAGCTTTGCTAGGAAGATATTCTTCCCTACATTATCTTTTCTTGGGTGATTGCAGTTACGTTGTACATACCGTGCTTATGATGCCATGGACGAGATCACTGCTGCCTTTTCAATTGCCTTCAATCCCGCAGGGACTAAGTAAACATTCTTCTTTATCAAAGTGCTCATCTCCTTCCTTGCTCTTGTGGTCACTGTTCATGTAGAGGCACCTGTTTCATCTTTCTTTAATATTTATTTGTAGTTTTTTAAAGAGAGGAAAAAATGAGTTCTTTTGATTTATTGAGAAAGTAATCTATCCATAATTTCTGGCAGTGTGATTAGATTGACAGTAATGAGGCCTAGTTGTTAATTTAGGTGGTTGCAAGTTTTGATACTCTGTCCTCACAAAGGATCATTTTCCTATTTTGTTTTTTCATTATATTGTTTAGACTTAAAGACATGCATTTTCAGTTTTTCTTCTAGTATCTTCTTACTTCATATGCTCTATACTAACTTCTTATGTGTTATTGTGATTTGCTTCACTTTCTTTATTTATGTACTTACAGTTGTTAATATGCTAAGTTTAAACGAAAGTTTTCATTGTTACTTCATTCTTCTCGAATTAGGATATTTGCTGGTTACAACAAATCCATAAGAATATTTGATATTCATCGGCCTGGCAGAGATTTTACCCAGCACTCCACCCTTCAAGGAAATAAAGAAGGGCAATCAGGTATGTTCAGCTAGCTGCTTTTCTTTATGATCACGTTTTTAGCATTTGACTTTATAAATAAGACAATTAGCTAACAATATCTGTGTTAAACACATCAATCTGATAGTTATCTCAAAGAGAAACTATTAAGTCCTCTTGAGGCTAATTAATTTTACCACTTTTGATGCCTCCATTATTATTCATTAAACATTTATTACTCTGGCACCTTTTCTCTAATCTGTTAAGGCATTATTCCTCATTTATTATTCCAACTCCTTTTCTCTTATCTGTTAGGAATTATATCCTCAATGGCTTTCTGTCCAAGCCATTCAGGGTTATTGGCAACTGGCT</genome_strand>
        <mrna_strand>GGTTATTCACTATGATGTTCCGCCGTATCTAACCTATCATTTCTTCAATCAGTTCAGGACGCCTTCAAACCCTAATAATTTCTTAAAGGGTGTCAAATG......................................................................................................GTCTCCTGATGGTTCTGGTTTCCTCACTTGCTCTGATGATAATACCTTTTGTTTATATAACTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATATGATGAAAGTGGACAGCTTGCTGATTTTTCCTCATCAGCTGCTGATACAG....................................................................................................................................................................................ATTCGTATGCTGCAAGTCTTGTCATGAGTGACGGGGAGTCTGTATATGACTATTGCTGGTATCCCTATATGTCTTCTTCAA.................................................................................GTCCAGAGACGTGTGTTTTTGCAAGTACTACCCGTGATCACCCTATTCATCTCTGGGATGCTACTACTGGACAG.........................................................................................................................................................TTACGCTGTACATACCGTGCTTATGATGCCATGGACGAGATCACTGCTGCCTTTTCGATTGCCTTCAATCCCGCAGGGACTAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATTTGCTGGTTACAACAAATCCATAAGAATATTTGATATTCATCGGCCTGGCAGAGATTTTACCCAGCACTCCACCCTTCAAGGAAATAAAGAAGGGCAATCAG.................................................................................................................................................................................................................................................................................GCATTATATCCTCAATGGCTTTCTGTCCAAGCCATTCAAGGTTACTGGCAACTGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E572087" ref_strand="+" ref_description="SGN-E572087 [31186]">
      <seq>ctggttacaacaaatccataagaatatttgatattcatcggcctggcagagactttacccagcactccacccttcaaggaaataaagaagggcaatcaggcattatatcctcaatggctttctgtccaagccattcagggttactggcaacaggctcctatagccaaactactgccatacatagggaagataacatggaacttctctatgtcttgcatggtcaagaaggtggggttacacatgtccaattctcaaaagacggaaactacttgtacactggtggccggaaggacccttacatactgtgctgggacattcggaagactgctgaaattgtttacaagatgtacagatcatcagaaactaccaatcagcggatatattttgatattgaacctcgaggtcagcatcttggctctggaggacaggatggctcagttcacatttataatcttcaaaccggacagtgggtatccagcttccgagctgcatcagacacggttaatggcttttcatttcatcctttcctgccgatggctgcctcttcatcaggccaccggagatttggagttatagatgactcccacgaggatatgctcctaacaggtgatgaaaattgtgtttccgtgtggagcttcgcctattcagcattcgtagaaaatgatggtagtcgcatttctgggggctcaaatggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="136153" stop="141017"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136453" g_stop="136551" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="136552" i_stop="136824" i_length="273">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.447" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="136825" g_stop="136967" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="242" r_length="143" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="136968" i_stop="137061" i_length="94">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.771" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="137062" g_stop="137109" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="290" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="137110" i_stop="139410" i_length="2301">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.844" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="139411" g_stop="139463" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="343" r_length="53" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="139464" i_stop="139876" i_length="413">
            <donor d_prob="0.873" d_score="1.00"/>
            <acceptor a_prob="0.352" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="139877" g_stop="139961" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="428" r_length="85" r_score="0.976"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="139962" i_stop="140045" i_length="84">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="140046" g_stop="140112" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="495" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="140113" i_stop="140197" i_length="85">
            <donor d_prob="0.321" d_score="1.00"/>
            <acceptor a_prob="0.608" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="140198" g_stop="140308" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="606" r_length="111" r_score="0.982"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="140309" i_stop="140628" i_length="320">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.993" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="140629" g_stop="140717" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="607" r_stop="695" r_length="89" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E572087" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E572087" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="136453" e_stop="136551"/>
          <exon e_start="136825" e_stop="136967"/>
          <exon e_start="137062" e_stop="137109"/>
          <exon e_start="139411" e_stop="139463"/>
          <exon e_start="139877" e_stop="139961"/>
          <exon e_start="140046" e_stop="140112"/>
          <exon e_start="140198" e_stop="140308"/>
          <exon e_start="140629" e_stop="140717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGTTACAACAAATCCATAAGAATATTTGATATTCATCGGCCTGGCAGAGATTTTACCCAGCACTCCACCCTTCAAGGAAATAAAGAAGGGCAATCAGGTATGTTCAGCTAGCTGCTTTTCTTTATGATCACGTTTTTAGCATTTGACTTTATAAATAAGACAATTAGCTAACAATATCTGTGTTAAACACATCAATCTGATAGTTATCTCAAAGAGAAACTATTAAGTCCTCTTGAGGCTAATTAATTTTACCACTTTTGATGCCTCCATTATTATTCATTAAACATTTATTACTCTGGCACCTTTTCTCTAATCTGTTAAGGCATTATTCCTCATTTATTATTCCAACTCCTTTTCTCTTATCTGTTAGGAATTATATCCTCAATGGCTTTCTGTCCAAGCCATTCAGGGTTATTGGCAACTGGCTCATATAGCCAAACTACTGCCATACATAGGGAAGATAACATGGAACTTCTCTATGTCTTGCATGGTCAAGAAGGTGGGGTTACACATGTAAGTTGGCCGAGCTATCATTCGTATTTTTTTTACTATACTGTACTCAGATACTTCAAATGATTCATCAACCGTTAACATATTCACTTATTAGGTCCAATTCTCAAAAGACGGAAACTACTTGTACACTGGTGGCCGGAAGGTTAGAACGATGATACATTACTGTTCATTACTTTCAATGCCTATTTATCATTGAATTGTACTGTTATTTGGTCCTTCCTTTGCAAAGAGAATGCTGGATCTATAATTTCGTCATATCCGTCACAGATAATGGAGAGGTGCACTTGCCACCTCAAACAGTTTCTGATTTTCTAAGCTCTAACAGATAAGAAACCAGAATGAATAGACAGTCAAAACAAGGGAACACAGAGCATTATACATTTGAGTCGATTTCATTTTCCTGTGCTAGCTTTTAATTCTGAGTTTTCTTATTTGGTTGGGATAGGGTTGGGACAGTGGAACCCAGGATCTGTTTCAGTGCTAAGTAGGAGTGGTAATCGAGCGAGTCGAGTCGAATATGAGTCGATCAAAAAACGAGTTAAATAAAAATGGGTAAGTTACCTGACTCGCCTCATATTTTAAATGGGTAAAAACGAGTTACCCATTGGATAATATGGGTAACCATATTTACCCATATTGTATTAGAGATTTTTTTTTTAATGACTTCACTCCACCCCTACCAGTCCCCGGCCACCCCCACAAACCACCCACCCACCCCACCCTAAAAAAATTAACAAAATTTAAAAAAAAATCATTAATTTTTTTTAAAAAAATTATTACCCCACCCCCTAAAAGCCCCCTCCACAACCCCATCCAAAAAAAGTTTAACCCCCCCCCCCCCAACACCCCATCCCAAAAAGAAATTAACAATTTTTTCATTAATACTTTAATTTTTTTTTGAAAAAAATTACCACCCCACCCCCTACCACTACCAACCCCTATCCATAATTAAATGTAAAAAAAAGTTTCATTTTTTTTATAGATTTTTTTTTTTAAAACTTTCTTACTACCCAACCCTTTATCACTTTTTTCTTTTTTTGCTTCTATCCATTTGACTACCCATTTTTAAATGGGTAATATGGGTATTACTCGTTTTTTACCCATTTTTTAAATGAGTTGGATACTCAATTCATTTAGAATGGGTAATATGAATGGATACCCAATTCATTTAAAATGTGTAATATGAATGGATACCCATATTATTTACCTATTTTGCCACCCCTAGTGCTATGAAATTGACTAAAAGTAGAACAGAAATATCTTTGGCTTAACAAAGTAATACATAAATCACTGTATCTTCCTTAATTTTTTCGAGCAAGTCTTTGAGCTTGGGACTTCCATGTTGGAGGTCTCAAGTTCGAAACCCCTTGTCAGCGAAAGCAAGGGGTTTGCCTTCTGGGTCGAGCAAGCTTGGTGCGGTTTACCTCTCCTATGTGGTTTGCGAGGTATTGCATAGGAGGAGGGGTTTTACCCTGTGCGCACCCAAAGGGTAGCAGCTGCGGGTTTCCCTTGTCGTCAACAAAATAATATAAAACGATTCTGCACTGGAAAAAGACAATCAAGAATAGCTCAAGGTCGATTACTGATCAATGATTTTGCAAAATTATTAAAAGTTCAGTTACCTTTTTCAACTATGCCCTAGTAAAAGTATAATATTACAATCTCATTAACTTTTTTTTGCAAATTATTACTAAACAGAGAAATGCTTTCCTCACGATCAATGTTAATGGAAGAGATTATTCATCAATATTTAATGGTAACCATATTTCAGACTTGGATTCCTGTTTATTAATGATCCTAGCACCTTCTCTTCTTTTACCTTTGTTTATCCTTTAATTTTTCTCCTATTCTATTAAGGGTTAGATGAGGTGAGATCAGGAAAGCAGTTTATGACTTTAGTGTTACCATAGAATTAGTGCCAGAAGATGTTTATGGGGAGATGCAGAACAAAGTTGGCGAGCATTTGAAGTTCATTTATTTTTCACCCGTTCCTCCAAACCCACTACATTAGCCTTATAGGATACCTATAAATGAACTCTGAACAGCCTTGAATCCAGTCGAATGTATAATTGACCACTTGGCCTCATAAAGAGGTTTAAAATATACTTTAACATCTCTACCAACTCGAAAGGCTCAAGTATCAATCTTTTCAATTTCTATCTTGACATTTTAGTGTATAGTTTGTAAACTTGAGTAATAATTTTAAAATAAGATCTGTTTTCATTTCCTTCATCCAAAGAAATATAAACTTTGTGCCCGTTCCTCTGTAAGGCATGCTTGCTACTTGTTGATTTCCTTCACTTTTCTATTTATGATCTAAAATTTGACCCTTTCTTCTTCGGACTCAATTCTTGTCTATTGTCACGTGTATGCTAGTATCCTGTCATGCATGCATGTTGTGTTAAACATATGTTTGACCAAGTTCATCTCAAACTTCTTTTAGGACCCTTACATACTGTGCTGGGACATTCGGAAGACTGCTGAAATTGTTTACAAGTAAGTTTCTTTTTACTGATTGGACACTTGACTTGGGGAACTGGAGCATTGGAATGATTGTCTTGATAACTCTGTTTTTGTTCAGTAAAGAAGCTAATGAGATGCATCCCTCTTCCAAATTAATTGCATTTTACAAGTCGGAGACGTCTCACACTCCTGCTAGAAATGTGAATTGTTTAGCAGTTACTTTGTCCTATAAAATAACACTATATATGTTCACATGATTTTTTTTCCTGGAAAGTAACTTTCATAGTCTATATTCACAGTTTTTTGAATTATCCATGTCGAAAATAACAATTTGCATGAATTAAGTAATTTGCTATGCACAACGATAACTTTTGTAAGTTTGAATTTATTATGACCTAGTGCTTCAGTGATCAACTAAAGTTCCCCTTTTGGCTTCATTTAATTAGGATGTACAGATCATCAGAAACTACCAATCAGCGGATATATTTTGATATTGAACCTCGAGGTCAGCATCTCGGCTCCGGAGGACAGGTAATGTTTTGCTTAGCTCAAAATTACATTCCTTGTCAGAATGAAATACAAGATCTTATCTTCCATTCTTGTTCGTCTCTCTAGGATGGCTCAGTTCACATTTATAATCTTCAAACCGGACAGTGGGTATCCAGCTTCCGAGCTGCATCAGGTATTTCGTTGTGTTCATTGAAGAATAAGTTGGGAGAAGGTCCACCTAGTTTCCTTTATTTCTTACTCAGTGTATCCTGTTACAGACACGGTTAATGGCTTTTCATTTCATCCTTTCCTGCCGATGGCTGCCTCTTCATCAGGCCAACGGAGATTTGGAGTTATAGATGACTCCCACGAGGATATGCTCCTTACAGGTAAATTCGTTCAACCTACATTGTTTGAATAATTCCCAAGTACTGTGAATTAAAGCTTTTGTAGTTGTCTGGAGTCAATTATTTTCAATGTTCATTTCATATCTTCTCCTTCTATGCTTTGTTCTGTCAATTCCTCATTCCCATTTGCCTTTTTAGGAAAACAAATTTGTTGCCATACTTCTTAGTCCTATTTCCTTCCATTCCTTAACACTAAAATGCTTAAATCATCTTCTTTGTCAAGTCAAGCATCACATTTTTTCTACAAAATGACCTTTTAAGATGAAAAGTTCTTAAAATATGGTTGTGTTTTCCTTGTTTAGGTGATGAAAATTGTGTTTCTGTGTGGAGCTTCGCCTATTCAGCATCTGTAGAAAATGATGTTAGTCCCATTTCCGGGGTCTCAAATGGT</genome_strand>
        <mrna_strand>CTGGTTACAACAAATCCATAAGAATATTTGATATTCATCGGCCTGGCAGAGACTTTACCCAGCACTCCACCCTTCAAGGAAATAAAGAAGGGCAATCAG.................................................................................................................................................................................................................................................................................GCATTATATCCTCAATGGCTTTCTGTCCAAGCCATTCAGGGTTACTGGCAACAGGCTCCTATAGCCAAACTACTGCCATACATAGGGAAGATAACATGGAACTTCTCTATGTCTTGCATGGTCAAGAAGGTGGGGTTACACAT..............................................................................................GTCCAATTCTCAAAAGACGGAAACTACTTGTACACTGGTGGCCGGAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCCTTACATACTGTGCTGGGACATTCGGAAGACTGCTGAAATTGTTTACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................GATGTACAGATCATCAGAAACTACCAATCAGCGGATATATTTTGATATTGAACCTCGAGGTCAGCATCTTGGCTCTGGAGGACAG....................................................................................GATGGCTCAGTTCACATTTATAATCTTCAAACCGGACAGTGGGTATCCAGCTTCCGAGCTGCATCAG.....................................................................................ACACGGTTAATGGCTTTTCATTTCATCCTTTCCTGCCGATGGCTGCCTCTTCATCAGGCCACCGGAGATTTGGAGTTATAGATGACTCCCACGAGGATATGCTCCTAACAG................................................................................................................................................................................................................................................................................................................................GTGATGAAAATTGTGTTTCCGTGTGGAGCTTCGCCTATTCAGCATTCGTAGAAAATGATGGTAGTCGCATTTCTGGGGGCTCAAATGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/gth_cdna_fileCXGN::TomatoGenome::BACSubmission::Analysis::GenomeThreader::SGN_E_tomato_potato" ref_id="SGN-E443600" ref_strand="+" ref_description="SGN-E443600 [cSTA-39-C23]">
      <seq>aatttgtattacaaattacaatttacaactattagtagagtgcatagtttacgcagccaccttctaggaagggttctgtttcaactaagcctcaaatgtaatactaatagttgtatagtcccgtaaattctttctctaactcagctatagattgaccgtaatcaactactggtcttggtaaagctcgttgacgatcttgaagttccatgccatcgtcactaccacatccaatggcggaatctatgaaaagttcaaattgactatccaactttggaagtccttgatttctccgctcagcatttattcaatctcttaacaacaccgatatctccaaactgtcttctgctaacgaatatctgtggtctccaatttgaaatcttgccgcgctgaaagctgccttcgaagcaactgatgatccttgaattgcaagcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C02SLm0114O11-4SgcP/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C02SLm0114O11.1" temp_strand="+" temp_description="C02SLm0114O11.1  AC215491.2 htgs_phase:3 submitted_to_sgn_as:C02SLm0114O11 sequenced_by:kribb upload_account_name:korea">
        <position start="146375" stop="147079"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="146663" g_stop="147079" g_length="417"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="413" r_length="413" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C02SLm0114O11.1" gen_strand="+" ref_id="SGN-E443600" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C02SLm0114O11.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E443600" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="146663" e_stop="147079"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTGTAATAAATTACAATTTCAATTTACAACTATTAGTAGAGTACATAGCTTACGCAGCCACCTTCTAGGAAGGGTTCTGTTTCAACTATGTCTCGAATGTAATATTAATAGTTGTATAGTCCCGTAAATCCTCTTTCTAACTCAGCTATGGATTGATTGTGATCAACTTCTGGTCTTGGTAAAGCTCGTTGACGATCTTGAATTTCGATGCCATCATCACTACCATATCCAATAGCTGAATCTATGAAAAGTTCAAATTGACTATCTAACTTTGGAAGTCCTTGATTTCTACGCTCAGCATTTATCCAGTCTCTAAATAACACTGATATCTCCAGGGTGTGTTCTGCTAACGAATATCTGTGGTCTCCAATTTGAAATCTTGTCGCGCTGAAAGCTGCCTCCGAAGCTACTGAT</genome_strand>
        <mrna_strand>AATTTGT-ATTA--CA-AATTACAATTTACAACTATTAGTAGAGTGCATAGTTTACGCAGCCACCTTCTAGGAAGGGTTCTGTTTCAACTAAGCCTCAAATGTAATACTAATAGTTGTATAGTCCCGTAAATTCTTTCTCTAACTCAGCTATAGATTGACCGTAATCAACTACTGGTCTTGGTAAAGCTCGTTGACGATCTTGAAGTTCCATGCCATCGTCACTACCACATCCAATGGCGGAATCTATGAAAAGTTCAAATTGACTATCCAACTTTGGAAGTCCTTGATTTCTCCGCTCAGCATTTATTCAATCTCTTAACAACACCGATATCTCCAAACTGTCTTCTGCTAACGAATATCTGTGGTCTCCAATTTGAAATCTTGCCGCGCTGAAAGCTGCCTTCGAAGCAACTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>170</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="4563" PGL_stop="2753"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4563" e_stop="4372"/>
            <exon e_start="3136" e_stop="3031"/>
            <exon e_start="2931" e_stop="2753"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.393" e_score="0.979"/>
          <exon-intron don_prob="0.629" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.978"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="4563" e_stop="4372" e_length="192"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.393">
            <gDNA_intron_boundary i_start="4371" i_stop="3137" i_length="1235"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="3136" e_stop="3031" e_length="106"/>
          </exon>
          <intron i_serial="2" don_prob="0.629" acc_prob="0.000">
            <gDNA_intron_boundary i_start="3030" i_stop="2932" i_length="99"/>
          </intron>
          <exon e_serial="3" e_score="0.978">
            <gDNA_exon_boundary e_start="2931" e_stop="2753" e_length="179"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4563" stop="4372"/>
              <exon start="3136" stop="3031"/>
              <exon start="2931" stop="2753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324728" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCATCGGGAAAATTAAAAATTAGCAGCTAAAATAAGATCGTACAAAACCGATTGGTGCACATTCACGAAAGCCTTGTTAACCCTAGGAAATAGATGTGGTTCGAGCTGTCGCTGAGAATTTTAGTGTGAAGGGGATTGAGAAGCTTTTCTTTTTGGTATATTACCCCTCAAATTTCAGAGCTCATATTCCAG : TCAGGTTTAACAAGGCTGACCAACTTTAATGTGGTGTTCTTATGGGTTTACGGATTTGGATTTTTGAGTTGTATTATGAAATTGTTGGAGTTCTGAGTGGTTACAG : TTGTGAGACCGTGTTGCACTAGCATCTTCCAGTTACCATTATCTTTCTCCAGCATGTGAGCTTTCATTAAGGGTTCGTTCAAGGAATAAGCAGTATAATACCGACTTAGAGTGTATCAAGAGAAAAGAAGAGAAGAGTCTGGCAGTTTTAAGACCCATAATGCTGAAACTCTTTGATTC</gDNA_template>
            <first_frame> P  S  G  K  L  K  I  S  S  *  N  K  I  V  Q  N  R  L  V  H  I  H  E  S  L  V  N  P  R  K  *  M  W  F  E  L  S  L  R  I  L  V  *  R  G  L  R  S  F  S  F  W  Y  I  T  P  Q  I  S  E  L  I  F  Q  :  S  G  L  T  R  L  T  N  F  N  V  V  F  L  W  V  Y  G  F  G  F  L  S  C  I  M  K  L  L  E  F  *  V  V  T   : V  V  R  P  C  C  T  S  I  F  Q  L  P  L  S  F  S  S  M  *  A  F  I  K  G  S  F  K  E  *  A  V  *  Y  R  L  R  V  Y  Q  E  K  R  R  E  E  S  G  S  F  K  T  H  N  A  E  T  L  *  F </first_frame>
            <second_frame>  H  R  E  N  *  K  L  A  A  K  I  R  S  Y  K  T  D  W  C  T  F  T  K  A  L  L  T  L  G  N  R  C  G  S  S  C  R  *  E  F  *  C  E  G  D  *  E  A  F  L  F  G  I  L  P  L  K  F  Q  S  S  Y  S  S :   Q  V  *  Q  G  *  P  T  L  M  W  C  S  Y  G  F  T  D  L  D  F  *  V  V  L  *  N  C  W  S  S  E  W  L  Q  :  L  *  D  R  V  A  L  A  S  S  S  Y  H  Y  L  S  P  A  C  E  L  S  L  R  V  R  S  R  N  K  Q  Y  N  T  D  L  E  C  I  K  R  K  E  E  K  S  L  A  V  L  R  P  I  M  L  K  L  F  D   </second_frame>
            <third_frame>   I  G  K  I  K  N  *  Q  L  K  *  D  R  T  K  P  I  G  A  H  S  R  K  P  C  *  P  *  E  I  D  V  V  R  A  V  A  E  N  F  S  V  K  G  I  E  K  L  F  F  L  V  Y  Y  P  S  N  F  R  A  H  I  P   : V  R  F  N  K  A  D  Q  L  *  C  G  V  L  M  G  L  R  I  W  I  F  E  L  Y  Y  E  I  V  G  V  L  S  G  Y  S :   C  E  T  V  L  H  *  H  L  P  V  T  I  I  F  L  Q  H  V  S  F  H  *  G  F  V  Q  G  I  S  S  I  I  P  T  *  S  V  S  R  E  K  K  R  R  V  W  Q  F  *  D  P  *  C  *  N  S  L  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0114O11.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="6862" PGL_stop="19536"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9809" e_stop="10417"/>
            <exon e_start="10527" e_stop="10585"/>
            <exon e_start="15365" e_stop="15446"/>
            <exon e_start="18262" e_stop="18325"/>
            <exon e_start="18831" e_stop="18898"/>
            <exon e_start="19031" e_stop="19536"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.968" acc_prob="0.999" e_score="0.996"/>
          <exon-intron don_prob="0.992" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.940" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.961" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="9809" e_stop="10417" e_length="609"/>
          </exon>
          <intron i_serial="1" don_prob="0.968" acc_prob="0.999">
            <gDNA_intron_boundary i_start="10418" i_stop="10526" i_length="109"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="10527" e_stop="10585" e_length="59"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="1.000">
            <gDNA_intron_boundary i_start="10586" i_stop="15364" i_length="4779"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="15365" e_stop="15446" e_length="82"/>
          </exon>
          <intron i_serial="3" don_prob="0.940" acc_prob="0.999">
            <gDNA_intron_boundary i_start="15447" i_stop="18261" i_length="2815"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="18262" e_stop="18325" e_length="64"/>
          </exon>
          <intron i_serial="4" don_prob="0.978" acc_prob="0.945">
            <gDNA_intron_boundary i_start="18326" i_stop="18830" i_length="505"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="18831" e_stop="18898" e_length="68"/>
          </exon>
          <intron i_serial="5" don_prob="0.923" acc_prob="0.961">
            <gDNA_intron_boundary i_start="18899" i_stop="19030" i_length="132"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="19031" e_stop="19536" e_length="506"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9809" stop="10319"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251090" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10019" stop="10417"/>
              <exon start="10527" stop="10585"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276325" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10028" stop="10417"/>
              <exon start="10527" stop="10585"/>
              <exon start="15365" stop="15446"/>
              <exon start="18262" stop="18316"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276299" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15370" stop="15446"/>
              <exon start="18262" stop="18325"/>
              <exon start="18831" stop="18898"/>
              <exon start="19031" stop="19302"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19058" stop="19536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253670" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAGTTTCAGCCTCATCTTGTCTGGAGTCTTGATCAGGTTGGTTTCCTTGATTGCTTTCTGCCGTACAACACTTGGTGGTGGTTGCATCTAGCCATGTATCATGAAGCTGATGGTAATGGCAAGGACTTTTTTTGGATTATTGACATTCAGGCGGTATTCAAAATCCAACTATTTAAAATTAGATTTTTTTTAAGAGAAAGGTAAGAGTAGTATTATGAAGTCTCCAGCACAAAGACTATGCTAGGAACAATATCTACTGTTCAAAAAGCAAAACAAAAGGTAAAACATGAACGACACTACAAGTGGACTGCAATTTAGTGGGTATTAGATTGTAAGTTTGTTGGTTGATATTTGTTACCCTTAGTGCAACTTTGTTCTGCAAAAATCTACCTCCGTTTCCCTGATTGACTGGTACAACTCTATGAAGTTTGTGAAGAAAATCTAGGAGGACTAGAACTATGACAATTGGAGGATGTTTTCTACAGAATATTTTGATCTGTTCGTGGATTCTGGTAATAGCTGCTCTTTGTGAAGGTTAATAGTTTGATGATTGTATGATAGTCCAATACTGGAAAAAAATGTGAACACAATCTTGTCACTTGACATAG : GTTAAAAGGAACATTCAAGACCAGACATATCAGCATATAGATGCTCGATCCAAAGCTAG : GTTTGATGGTGTTGCACCAGAGCCTCGAAAAGGAATTAACAGTGGACATGTACCCGGGAGCAAGTGTATTCCTTTTCCACAG : ATGTTGGATGGCTCACAGACACTCTTATCCCGTGAAGAGCTCGAGAAAAAATTTGGTCAAGAAG : GTATCTCTTTGGACAAGCCTATAGTTGCCTCTTGTGGCACAGGTGTAACTGCTTGCGTACTTGTCTTG : GGCCTCCATCGACTGGGGAAGACTGACATTCCAGTCTATGATGGTTCATGGACAGAATGGGCAACACAGCCAGATACACCTCTCTGCACATCTGAAAGATGAAGACGTTTGTATGGCCTGCCTAGTTTTTATGGGTGAGCAATGATGATTGTGAATCTAGATCTGGTTCCTTTTCTTAATGGTTAGTGCAACAACTTACATTGTATTGTTGAATGATAACAACGGAAAAATTTCTTCTCTGTTGTACAAAATGCCTTAATTTTACCTTCATTATATTTTTGGTTAGTGCAACAACTTCCATTAACTATACTTTGTACTAAAAAACACTCTTATGCTTGGATAAGTGAACTTAGAAAGGCCCCTGAAATCAAATGTATTCATGCGTTGTCCAGTTGGAGTTTATATTTGATGTGTCATTGAACATAAAACTACGCTATGCGTGATTATAAATATTTAGCGAAATAGATATTTGTATTTATACATATAATCATTTTTGGAACTTATAA</gDNA_template>
            <first_frame> Q  V  S  A  S  S  C  L  E  S  *  S  G  W  F  P  *  L  L  S  A  V  Q  H  L  V  V  V  A  S  S  H  V  S  *  S  *  W  *  W  Q  G  L  F  L  D  Y  *  H  S  G  G  I  Q  N  P  T  I  *  N  *  I  F  F  K  R  K  V  R  V  V  L  *  S  L  Q  H  K  D  Y  A  R  N  N  I  Y  C  S  K  S  K  T  K  G  K  T  *  T  T  L  Q  V  D  C  N  L  V  G  I  R  L  *  V  C  W  L  I  F  V  T  L  S  A  T  L  F  C  K  N  L  P  P  F  P  *  L  T  G  T  T  L  *  S  L  *  R  K  S  R  R  T  R  T  M  T  I  G  G  C  F  L  Q  N  I  L  I  C  S  W  I  L  V  I  A  A  L  C  E  G  *  *  F  D  D  C  M  I  V  Q  Y  W  K  K  M  *  T  Q  S  C  H  L  T  *  :  V  K  R  N  I  Q  D  Q  T  Y  Q  H  I  D  A  R  S  K  A  R :   F  D  G  V  A  P  E  P  R  K  G  I  N  S  G  H  V  P  G  S  K  C  I  P  F  P  Q  :  M  L  D  G  S  Q  T  L  L  S  R  E  E  L  E  K  K  F  G  Q  E   : G  I  S  L  D  K  P  I  V  A  S  C  G  T  G  V  T  A  C  V  L  V  L  :  G  L  H  R  L  G  K  T  D  I  P  V  Y  D  G  S  W  T  E  W  A  T  Q  P  D  T  P  L  C  T  S  E  R  *  R  R  L  Y  G  L  P  S  F  Y  G  *  A  M  M  I  V  N  L  D  L  V  P  F  L  N  G  *  C  N  N  L  H  C  I  V  E  *  *  Q  R  K  N  F  F  S  V  V  Q  N  A  L  I  L  P  S  L  Y  F  W  L  V  Q  Q  L  P  L  T  I  L  C  T  K  K  H  S  Y  A  W  I  S  E  L  R  K  A  P  E  I  K  C  I  H  A  L  S  S  W  S  L  Y  L  M  C  H  *  T  *  N  Y  A  M  R  D  Y  K  Y  L  A  K  *  I  F  V  F  I  H  I  I  I  F  G  T  Y   </first_frame>
            <second_frame>  K  F  Q  P  H  L  V  W  S  L  D  Q  V  G  F  L  D  C  F  L  P  Y  N  T  W  W  W  L  H  L  A  M  Y  H  E  A  D  G  N  G  K  D  F  F  W  I  I  D  I  Q  A  V  F  K  I  Q  L  F  K  I  R  F  F  L  R  E  R  *  E  *  Y  Y  E  V  S  S  T  K  T  M  L  G  T  I  S  T  V  Q  K  A  K  Q  K  V  K  H  E  R  H  Y  K  W  T  A  I  *  W  V  L  D  C  K  F  V  G  *  Y  L  L  P  L  V  Q  L  C  S  A  K  I  Y  L  R  F  P  D  *  L  V  Q  L  Y  E  V  C  E  E  N  L  G  G  L  E  L  *  Q  L  E  D  V  F  Y  R  I  F  *  S  V  R  G  F  W  *  *  L  L  F  V  K  V  N  S  L  M  I  V  *  *  S  N  T  G  K  K  C  E  H  N  L  V  T  *  H  R :   L  K  G  T  F  K  T  R  H  I  S  I  *  M  L  D  P  K  L   : G  L  M  V  L  H  Q  S  L  E  K  E  L  T  V  D  M  Y  P  G  A  S  V  F  L  F  H  R :   C  W  M  A  H  R  H  S  Y  P  V  K  S  S  R  K  N  L  V  K  K  :  V  S  L  W  T  S  L  *  L  P  L  V  A  Q  V  *  L  L  A  Y  L  S  W :   A  S  I  D  W  G  R  L  T  F  Q  S  M  M  V  H  G  Q  N  G  Q  H  S  Q  I  H  L  S  A  H  L  K  D  E  D  V  C  M  A  C  L  V  F  M  G  E  Q  *  *  L  *  I  *  I  W  F  L  F  L  M  V  S  A  T  T  Y  I  V  L  L  N  D  N  N  G  K  I  S  S  L  L  Y  K  M  P  *  F  Y  L  H  Y  I  F  G  *  C  N  N  F  H  *  L  Y  F  V  L  K  N  T  L  M  L  G  *  V  N  L  E  R  P  L  K  S  N  V  F  M  R  C  P  V  G  V  Y  I  *  C  V  I  E  H  K  T  T  L  C  V  I  I  N  I  *  R  N  R  Y  L  Y  L  Y  I  *  S  F  L  E  L  I  </second_frame>
            <third_frame>   S  F  S  L  I  L  S  G  V  L  I  R  L  V  S  L  I  A  F  C  R  T  T  L  G  G  G  C  I  *  P  C  I  M  K  L  M  V  M  A  R  T  F  F  G  L  L  T  F  R  R  Y  S  K  S  N  Y  L  K  L  D  F  F  *  E  K  G  K  S  S  I  M  K  S  P  A  Q  R  L  C  *  E  Q  Y  L  L  F  K  K  Q  N  K  R  *  N  M  N  D  T  T  S  G  L  Q  F  S  G  Y  *  I  V  S  L  L  V  D  I  C  Y  P  *  C  N  F  V  L  Q  K  S  T  S  V  S  L  I  D  W  Y  N  S  M  K  F  V  K  K  I  *  E  D  *  N  Y  D  N  W  R  M  F  S  T  E  Y  F  D  L  F  V  D  S  G  N  S  C  S  L  *  R  L  I  V  *  *  L  Y  D  S  P  I  L  E  K  N  V  N  T  I  L  S  L  D  I   : G  *  K  E  H  S  R  P  D  I  S  A  Y  R  C  S  I  Q  S  *  :  V  *  W  C  C  T  R  A  S  K  R  N  *  Q  W  T  C  T  R  E  Q  V  Y  S  F  S  T   : D  V  G  W  L  T  D  T  L  I  P  *  R  A  R  E  K  I  W  S  R  R :   Y  L  F  G  Q  A  Y  S  C  L  L  W  H  R  C  N  C  L  R  T  C  L   : G  P  P  S  T  G  E  D  *  H  S  S  L  *  W  F  M  D  R  M  G  N  T  A  R  Y  T  S  L  H  I  *  K  M  K  T  F  V  W  P  A  *  F  L  W  V  S  N  D  D  C  E  S  R  S  G  S  F  S  *  W  L  V  Q  Q  L  T  L  Y  C  *  M  I  T  T  E  K  F  L  L  C  C  T  K  C  L  N  F  T  F  I  I  F  L  V  S  A  T  T  S  I  N  Y  T  L  Y  *  K  T  L  L  C  L  D  K  *  T  *  K  G  P  *  N  Q  M  Y  S  C  V  V  Q  L  E  F  I  F  D  V  S  L  N  I  K  L  R  Y  A  *  L  *  I  F  S  E  I  D  I  C  I  Y  T  Y  N  H  F  W  N  L  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10527" stop="10585"/>
                    <exon start="15365" stop="15446"/>
                    <exon start="18262" stop="18325"/>
                    <exon start="18831" stop="18898"/>
                    <exon start="19031" stop="19132"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>372</number_coding_nucleotides>
                  <number_encoded_amino_acids>124</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKRNIQDQTYQHIDARSKARFDGVAPEPRKGINSGHVPGSKCIPFPQMLDGSQTLLSREELEKKFGQEGISLDKPIVASCGTGVTACVLVLGLHRLGKTDIPVYDGSWTEWATQPDTPLCTSER*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9810" stop="10013"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KFQPHLVWSLDQVGFLDCFLPYNTWWWLHLAMYHEADGNGKDFFWIIDIQAVFKIQLFKIRFFLRER*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19250" stop="19450"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QRKNFFSVVQNALILPSLYFWLVQQLPLTILCTKKHSYAWISELRKAPEIKCIHALSSWSLYLMCH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="6862" e_stop="6889"/>
            <exon e_start="7523" e_stop="7710"/>
            <exon e_start="8031" e_stop="8090"/>
            <exon e_start="8276" e_stop="8338"/>
            <exon e_start="8584" e_stop="8708"/>
            <exon e_start="8790" e_stop="8946"/>
            <exon e_start="9786" e_stop="9845"/>
            <exon e_start="10527" e_stop="10585"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.728" e_score="1.000"/>
          <exon-intron don_prob="0.957" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.786" e_score="1.000"/>
          <exon-intron don_prob="0.983" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.959" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="6862" e_stop="6889" e_length="28"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.728">
            <gDNA_intron_boundary i_start="6890" i_stop="7522" i_length="633"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7523" e_stop="7710" e_length="188"/>
          </exon>
          <intron i_serial="2" don_prob="0.957" acc_prob="0.981">
            <gDNA_intron_boundary i_start="7711" i_stop="8030" i_length="320"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="8031" e_stop="8090" e_length="60"/>
          </exon>
          <intron i_serial="3" don_prob="0.968" acc_prob="0.786">
            <gDNA_intron_boundary i_start="8091" i_stop="8275" i_length="185"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="8276" e_stop="8338" e_length="63"/>
          </exon>
          <intron i_serial="4" don_prob="0.983" acc_prob="0.996">
            <gDNA_intron_boundary i_start="8339" i_stop="8583" i_length="245"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="8584" e_stop="8708" e_length="125"/>
          </exon>
          <intron i_serial="5" don_prob="0.959" acc_prob="0.953">
            <gDNA_intron_boundary i_start="8709" i_stop="8789" i_length="81"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="8790" e_stop="8946" e_length="157"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.991">
            <gDNA_intron_boundary i_start="8947" i_stop="9785" i_length="839"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="9786" e_stop="9845" e_length="60"/>
          </exon>
          <intron i_serial="7" don_prob="0.973" acc_prob="0.999">
            <gDNA_intron_boundary i_start="9846" i_stop="10526" i_length="681"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="10527" e_stop="10585" e_length="59"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6862" stop="6889"/>
              <exon start="7523" stop="7710"/>
              <exon start="8031" stop="8090"/>
              <exon start="8276" stop="8338"/>
              <exon start="8584" stop="8708"/>
              <exon start="8790" stop="8946"/>
              <exon start="9786" stop="9845"/>
              <exon start="10527" stop="10585"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720065" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="6868" stop="6889"/>
              <exon start="7523" stop="7710"/>
              <exon start="8031" stop="8090"/>
              <exon start="8276" stop="8338"/>
              <exon start="8584" stop="8708"/>
              <exon start="8790" stop="8909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E391811" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7523" stop="7710"/>
              <exon start="8031" stop="8090"/>
              <exon start="8276" stop="8338"/>
              <exon start="8584" stop="8708"/>
              <exon start="8790" stop="8946"/>
              <exon start="9786" stop="9845"/>
              <exon start="10527" stop="10577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346366" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7527" stop="7710"/>
              <exon start="8031" stop="8090"/>
              <exon start="8276" stop="8338"/>
              <exon start="8584" stop="8708"/>
              <exon start="8790" stop="8907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249260" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCTCAATTTCTTCTCTCTGCTATCACC : AGGAAACCATTTCGCTCGCTAGCAGCTCCAACTTACTAATCTACAAAGTTAAGGGTTATTTTACTCGTTGTATGGCTTCCTCAATGGTTGGGGCACAACCATCATTCTCAACACTAGCAATATCAACCAACGAACCTGTTGTTTCAGTTGACTGGCTCCATGCAAACATCAGAGACCCCGACTTAAAG : GTGTTAGATGCATCTTGGTACATGCCAGATGAGCAGAGAAATCCACTCCAGGAGTATCAG : GTCGCTTGCATTCCTGGAGCACTATTCTTTGATATAGACGGAATAACTGATCGGACTACAAAT : TTGCCACATATGTTGCCGTCTGAAGAAGCATTTGCAGCTGCTGTGTCTGCTCTTGGTATCAAGAACAAAGATGGGGTTGTTATATACGATGGCAAGGGCATTTTCAGTGCTGCCCGTGTTTGGTG : GATGTTTCGAGCTTTTGGACATGACAAAGTTTGGGTTTTGGATGGTGGCTTGCCAAGATGGCGTGCTTCAGGTTATGATGTCGAGTCACCTGGTGATGCCATTCTGAAAGCTAGTGTTGCCACTGAGGCAATTGAGAAAGTATACCAAGGACAGATG : GTTGGACCTTCTACCTTCCAGACCAAGTTTCAGCCTCATCTTGTCTGGAGTCTTGATCAG : GTTAAAAGGAACATTCAAGACCAGACATATCAGCATATAGATGCTCGATCCAAAGCTAG</gDNA_template>
            <first_frame> S  S  I  S  S  L  C  Y  H   : Q  E  T  I  S  L  A  S  S  S  N  L  L  I  Y  K  V  K  G  Y  F  T  R  C  M  A  S  S  M  V  G  A  Q  P  S  F  S  T  L  A  I  S  T  N  E  P  V  V  S  V  D  W  L  H  A  N  I  R  D  P  D  L  K  :  V  L  D  A  S  W  Y  M  P  D  E  Q  R  N  P  L  Q  E  Y  Q  :  V  A  C  I  P  G  A  L  F  F  D  I  D  G  I  T  D  R  T  T  N  :  L  P  H  M  L  P  S  E  E  A  F  A  A  A  V  S  A  L  G  I  K  N  K  D  G  V  V  I  Y  D  G  K  G  I  F  S  A  A  R  V  W  W :   M  F  R  A  F  G  H  D  K  V  W  V  L  D  G  G  L  P  R  W  R  A  S  G  Y  D  V  E  S  P  G  D  A  I  L  K  A  S  V  A  T  E  A  I  E  K  V  Y  Q  G  Q  M  :  V  G  P  S  T  F  Q  T  K  F  Q  P  H  L  V  W  S  L  D  Q  :  V  K  R  N  I  Q  D  Q  T  Y  Q  H  I  D  A  R  S  K  A   </first_frame>
            <second_frame>  P  Q  F  L  L  S  A  I  T  :  R  K  P  F  R  S  L  A  A  P  T  Y  *  S  T  K  L  R  V  I  L  L  V  V  W  L  P  Q  W  L  G  H  N  H  H  S  Q  H  *  Q  Y  Q  P  T  N  L  L  F  Q  L  T  G  S  M  Q  T  S  E  T  P  T  *  R :   C  *  M  H  L  G  T  C  Q  M  S  R  E  I  H  S  R  S  I  R :   S  L  A  F  L  E  H  Y  S  L  I  *  T  E  *  L  I  G  L  Q  I :   C  H  I  C  C  R  L  K  K  H  L  Q  L  L  C  L  L  L  V  S  R  T  K  M  G  L  L  Y  T  M  A  R  A  F  S  V  L  P  V  F  G   : G  C  F  E  L  L  D  M  T  K  F  G  F  W  M  V  A  C  Q  D  G  V  L  Q  V  M  M  S  S  H  L  V  M  P  F  *  K  L  V  L  P  L  R  Q  L  R  K  Y  T  K  D  R  W :   L  D  L  L  P  S  R  P  S  F  S  L  I  L  S  G  V  L  I  R :   L  K  G  T  F  K  T  R  H  I  S  I  *  M  L  D  P  K  L  </second_frame>
            <third_frame>   L  N  F  F  S  L  L  S  P :   G  N  H  F  A  R  *  Q  L  Q  L  T  N  L  Q  S  *  G  L  F  Y  S  L  Y  G  F  L  N  G  W  G  T  T  I  I  L  N  T  S  N  I  N  Q  R  T  C  C  F  S  *  L  A  P  C  K  H  Q  R  P  R  L  K   : G  V  R  C  I  L  V  H  A  R  *  A  E  K  S  T  P  G  V  S   : G  R  L  H  S  W  S  T  I  L  *  Y  R  R  N  N  *  S  D  Y  K   : F  A  T  Y  V  A  V  *  R  S  I  C  S  C  C  V  C  S  W  Y  Q  E  Q  R  W  G  C  Y  I  R  W  Q  G  H  F  Q  C  C  P  C  L  V  :  D  V  S  S  F  W  T  *  Q  S  L  G  F  G  W  W  L  A  K  M  A  C  F  R  L  *  C  R  V  T  W  *  C  H  S  E  S  *  C  C  H  *  G  N  *  E  S  I  P  R  T  D   : G  W  T  F  Y  L  P  D  Q  V  S  A  S  S  C  L  E  S  *  S   : G  *  K  E  H  S  R  P  D  I  S  A  Y  R  C  S  I  Q  S  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6862" stop="6889"/>
                    <exon start="7523" stop="7710"/>
                    <exon start="8031" stop="8090"/>
                    <exon start="8276" stop="8338"/>
                    <exon start="8584" stop="8708"/>
                    <exon start="8790" stop="8946"/>
                    <exon start="9786" stop="9845"/>
                    <exon start="10527" stop="10583"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>738</number_coding_nucleotides>
                  <number_encoded_amino_acids>246</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSISSLCYHQETISLASSSNLLIYKVKGYFTRCMASSMVGAQPSFSTLAISTNEPVVSVDWLHANIRDPDLKVLDASWYMPDEQRNPLQEYQVACIPGALFFDIDGITDRTTNLPHMLPSEEAFAAAVSALGIKNKDGVVIYDGKGIFSAARVWWMFRAFGHDKVWVLDGGLPRWRASGYDVESPGDAILKASVATEAIEKVYQGQMVGPSTFQTKFQPHLVWSLDQVKRNIQDQTYQHIDARSKA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="18830" e_stop="18898"/>
            <exon e_start="19031" e_stop="19536"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.923" acc_prob="0.961" e_score="0.971"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.971">
            <gDNA_exon_boundary e_start="18830" e_stop="18898" e_length="69"/>
          </exon>
          <intron i_serial="1" don_prob="0.923" acc_prob="0.961">
            <gDNA_intron_boundary i_start="18899" i_stop="19030" i_length="132"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="19031" e_stop="19536" e_length="506"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18830" stop="18898"/>
              <exon start="19031" stop="19315"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744700" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19058" stop="19536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253670" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGTATCTCTTTGGACAAGCCTATAGTTGCCTCTTGTGGCACAGGTGTAACTGCTTGCGTACTTGTCTTG : GGCCTCCATCGACTGGGGAAGACTGACATTCCAGTCTATGATGGTTCATGGACAGAATGGGCAACACAGCCAGATACACCTCTCTGCACATCTGAAAGATGAAGACGTTTGTATGGCCTGCCTAGTTTTTATGGGTGAGCAATGATGATTGTGAATCTAGATCTGGTTCCTTTTCTTAATGGTTAGTGCAACAACTTACATTGTATTGTTGAATGATAACAACGGAAAAATTTCTTCTCTGTTGTACAAAATGCCTTAATTTTACCTTCATTATATTTTTGGTTAGTGCAACAACTTCCATTAACTATACTTTGTACTAAAAAACACTCTTATGCTTGGATAAGTGAACTTAGAAAGGCCCCTGAAATCAAATGTATTCATGCGTTGTCCAGTTGGAGTTTATATTTGATGTGTCATTGAACATAAAACTACGCTATGCGTGATTATAAATATTTAGCGAAATAGATATTTGTATTTATACATATAATCATTTTTGGAACTTATAA</gDNA_template>
            <first_frame> G  I  S  L  D  K  P  I  V  A  S  C  G  T  G  V  T  A  C  V  L  V  L  :  G  L  H  R  L  G  K  T  D  I  P  V  Y  D  G  S  W  T  E  W  A  T  Q  P  D  T  P  L  C  T  S  E  R  *  R  R  L  Y  G  L  P  S  F  Y  G  *  A  M  M  I  V  N  L  D  L  V  P  F  L  N  G  *  C  N  N  L  H  C  I  V  E  *  *  Q  R  K  N  F  F  S  V  V  Q  N  A  L  I  L  P  S  L  Y  F  W  L  V  Q  Q  L  P  L  T  I  L  C  T  K  K  H  S  Y  A  W  I  S  E  L  R  K  A  P  E  I  K  C  I  H  A  L  S  S  W  S  L  Y  L  M  C  H  *  T  *  N  Y  A  M  R  D  Y  K  Y  L  A  K  *  I  F  V  F  I  H  I  I  I  F  G  T  Y   </first_frame>
            <second_frame>  V  S  L  W  T  S  L  *  L  P  L  V  A  Q  V  *  L  L  A  Y  L  S  W :   A  S  I  D  W  G  R  L  T  F  Q  S  M  M  V  H  G  Q  N  G  Q  H  S  Q  I  H  L  S  A  H  L  K  D  E  D  V  C  M  A  C  L  V  F  M  G  E  Q  *  *  L  *  I  *  I  W  F  L  F  L  M  V  S  A  T  T  Y  I  V  L  L  N  D  N  N  G  K  I  S  S  L  L  Y  K  M  P  *  F  Y  L  H  Y  I  F  G  *  C  N  N  F  H  *  L  Y  F  V  L  K  N  T  L  M  L  G  *  V  N  L  E  R  P  L  K  S  N  V  F  M  R  C  P  V  G  V  Y  I  *  C  V  I  E  H  K  T  T  L  C  V  I  I  N  I  *  R  N  R  Y  L  Y  L  Y  I  *  S  F  L  E  L  I  </second_frame>
            <third_frame>   Y  L  F  G  Q  A  Y  S  C  L  L  W  H  R  C  N  C  L  R  T  C  L   : G  P  P  S  T  G  E  D  *  H  S  S  L  *  W  F  M  D  R  M  G  N  T  A  R  Y  T  S  L  H  I  *  K  M  K  T  F  V  W  P  A  *  F  L  W  V  S  N  D  D  C  E  S  R  S  G  S  F  S  *  W  L  V  Q  Q  L  T  L  Y  C  *  M  I  T  T  E  K  F  L  L  C  C  T  K  C  L  N  F  T  F  I  I  F  L  V  S  A  T  T  S  I  N  Y  T  L  Y  *  K  T  L  L  C  L  D  K  *  T  *  K  G  P  *  N  Q  M  Y  S  C  V  V  Q  L  E  F  I  F  D  V  S  L  N  I  K  L  R  Y  A  *  L  *  I  F  S  E  I  D  I  C  I  Y  T  Y  N  H  F  W  N  L  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19250" stop="19450"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QRKNFFSVVQNALILPSLYFWLVQQLPLTILCTKKHSYAWISELRKAPEIKCIHALSSWSLYLMCH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="14006" e_stop="14665"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="14006" e_stop="14665" e_length="660"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14006" stop="14665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342933" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCGTGTCCAAACTTCCAGCCTACTGTTAACTCCATTGCGTGTCTGGTCAATCAGTACTATGTCATTTGCCAATAACATTCACAATGGCACCTTTCCTTGGATATGACGTGTCAACTCATCCAACACCAACAACACAAATAGAAACAGGCTTAGAGCGGATCTCTGGTGCAACCCCATTATGACTTAGAAGTGTTCTAAGTCTTCTTCCAGTGTTCTTACCGGCTTGGCTATTGTACATGTTCTGAATCACTCTACTGTATGCCACCGATACACTTCTAACCTCCAAACACCTCCATAGAACCTCTCTTGGGACTTCATCATAAGTCTTTTCTAGGTCAATGAACACCACAGGTATGTCCTTATCCAAATGAGCCCATTAACTCTACAAAATGCAAAACCTCAACTTTTTCATGTAAGAAACTAAGATGCCTATGATGCCAAGTATAATCAGAATTTTTTACTATACTCTTCCAGATGTCACAGCTTGCGGACCCAGTTAAGAGCCATTTGATTGCTTGATATGCATTGACATGTATGTGCATAAGATTTAGAAAGAAAAACCACTTCTCTTTATATTTTAAGAATATTACTAGTTTCGTTCTTTGTGTGATGTCAAGGAGCAATTCTCACATTAACTTCTTTGTAGGATTTCTTCCCTTT</gDNA_template>
            <first_frame> S  C  P  N  F  Q  P  T  V  N  S  I  A  C  L  V  N  Q  Y  Y  V  I  C  Q  *  H  S  Q  W  H  L  S  L  D  M  T  C  Q  L  I  Q  H  Q  Q  H  K  *  K  Q  A  *  S  G  S  L  V  Q  P  H  Y  D  L  E  V  F  *  V  F  F  Q  C  S  Y  R  L  G  Y  C  T  C  S  E  S  L  Y  C  M  P  P  I  H  F  *  P  P  N  T  S  I  E  P  L  L  G  L  H  H  K  S  F  L  G  Q  *  T  P  Q  V  C  P  Y  P  N  E  P  I  N  S  T  K  C  K  T  S  T  F  S  C  K  K  L  R  C  L  *  C  Q  V  *  S  E  F  F  T  I  L  F  Q  M  S  Q  L  A  D  P  V  K  S  H  L  I  A  *  Y  A  L  T  C  M  C  I  R  F  R  K  K  N  H  F  S  L  Y  F  K  N  I  T  S  F  V  L  C  V  M  S  R  S  N  S  H  I  N  F  F  V  G  F  L  P  F </first_frame>
            <second_frame>  R  V  Q  T  S  S  L  L  L  T  P  L  R  V  W  S  I  S  T  M  S  F  A  N  N  I  H  N  G  T  F  P  W  I  *  R  V  N  S  S  N  T  N  N  T  N  R  N  R  L  R  A  D  L  W  C  N  P  I  M  T  *  K  C  S  K  S  S  S  S  V  L  T  G  L  A  I  V  H  V  L  N  H  S  T  V  C  H  R  Y  T  S  N  L  Q  T  P  P  *  N  L  S  W  D  F  I  I  S  L  F  *  V  N  E  H  H  R  Y  V  L  I  Q  M  S  P  L  T  L  Q  N  A  K  P  Q  L  F  H  V  R  N  *  D  A  Y  D  A  K  Y  N  Q  N  F  L  L  Y  S  S  R  C  H  S  L  R  T  Q  L  R  A  I  *  L  L  D  M  H  *  H  V  C  A  *  D  L  E  R  K  T  T  S  L  Y  I  L  R  I  L  L  V  S  F  F  V  *  C  Q  G  A  I  L  T  L  T  S  L  *  D  F  F  P   </second_frame>
            <third_frame>   V  S  K  L  P  A  Y  C  *  L  H  C  V  S  G  Q  S  V  L  C  H  L  P  I  T  F  T  M  A  P  F  L  G  Y  D  V  S  T  H  P  T  P  T  T  Q  I  E  T  G  L  E  R  I  S  G  A  T  P  L  *  L  R  S  V  L  S  L  L  P  V  F  L  P  A  W  L  L  Y  M  F  *  I  T  L  L  Y  A  T  D  T  L  L  T  S  K  H  L  H  R  T  S  L  G  T  S  S  *  V  F  S  R  S  M  N  T  T  G  M  S  L  S  K  *  A  H  *  L  Y  K  M  Q  N  L  N  F  F  M  *  E  T  K  M  P  M  M  P  S  I  I  R  I  F  Y  Y  T  L  P  D  V  T  A  C  G  P  S  *  E  P  F  D  C  L  I  C  I  D  M  Y  V  H  K  I  *  K  E  K  P  L  L  F  I  F  *  E  Y  Y  *  F  R  S  L  C  D  V  K  E  Q  F  S  H  *  L  L  C  R  I  S  S  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0114O11.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="21058" PGL_stop="21857"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21058" e_stop="21573"/>
            <exon e_start="21649" e_stop="21829"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.884" e_score="0.961"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.961">
            <gDNA_exon_boundary e_start="21058" e_stop="21573" e_length="516"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.884">
            <gDNA_intron_boundary i_start="21574" i_stop="21648" i_length="75"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="21649" e_stop="21829" e_length="181"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21058" stop="21573"/>
              <exon start="21649" stop="21829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E449035" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21067" stop="21573"/>
              <exon start="21649" stop="21814"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E452169" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21067" stop="21573"/>
              <exon start="21649" stop="21802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440424" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACCCCAAAGCCCCATTCGGTTTTTCCGACGACCAAGACCGGCGACAATTCAGTTTTTCCGACGAGCAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAG : GACGTCAAGAAATGGGATTCCAAAAGAGTTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTCAAAAAATATATATGGCAATTCGAGCTCCTATTATTAATAGGGAAAGAAAAGAACTTACTGAGGCATACATGGAAGCATTGATTCCTGAACCTACTCCTGTTAATGTCA</gDNA_template>
            <first_frame> T  P  K  P  H  S  V  F  P  T  T  K  T  G  D  N  S  V  F  P  T  S  K  R  A  E  T  E  A  L  S  S  Y  S  L  S  F  S  M  H  L  T  T  T  P  P  P  Q  Q  L  N  S  I  Q  L  S  S  K  P  L  L  L  T  L  P  F  K  C  R  R  K  F  S  R  I  R  R  P  T  I  V  A  S  S  S  N  T  N  N  S  P  E  G  F  S  W  L  Q  L  S  Q  S  I  R  R  G  S  E  R  F  L  N  Q  L  E  D  S  V  K  Q  E  T  G  F  D  F  K  D  V  K  V  K  V  G  E  F  S  G  R  A  V  D  S  A  K  N  G  Q  V  L  L  Q  R  F  Q  S  E  L  F  P  E  F  L  N  W  N  K  F  E  S  W  K  :  D  V  K  K  W  D  S  K  R  V  G  V  F  I  L  Y  I  I  V  T  V  C  S  C  Q  K  I  Y  M  A  I  R  A  P  I  I  N  R  E  R  K  E  L  T  E  A  Y  M  E  A  L  I  P  E  P  T  P  V  N  V  </first_frame>
            <second_frame>  P  Q  S  P  I  R  F  F  R  R  P  R  P  A  T  I  Q  F  F  R  R  A  R  E  P  K  P  K  H  Y  L  R  I  L  *  A  S  Q  C  I  *  P  L  L  L  L  L  N  S  *  I  Q  Y  N  Y  L  Q  N  P  F  Y  S  H  C  H  S  N  A  E  G  S  F  P  V  *  E  D  L  P  L  *  L  L  L  P  I  L  I  T  V  L  K  G  F  L  G  C  N  F  H  S  P  F  A  V  V  P  N  V  S  *  I  N  W  K  T  L  *  S  K  R  R  V  L  I  L  R  M  L  K  L  K  L  G  N  F  Q  V  E  L  L  I  Q  P  R  M  A  K  F  C  C  N  V  F  S  L  S  C  F  L  S  S  *  I  G  T  N  S  S  P  G  R :   T  S  R  N  G  I  P  K  E  L  V  Y  S  F  S  I  L  *  L  R  Y  V  L  V  K  K  Y  I  W  Q  F  E  L  L  L  L  I  G  K  E  K  N  L  L  R  H  T  W  K  H  *  F  L  N  L  L  L  L  M  S </second_frame>
            <third_frame>   P  K  A  P  F  G  F  S  D  D  Q  D  R  R  Q  F  S  F  S  D  E  Q  E  S  R  N  R  S  I  I  F  V  F  S  K  L  L  N  A  S  N  H  Y  S  S  S  S  T  A  E  F  N  T  I  I  F  K  T  P  F  T  H  I  A  I  Q  M  Q  K  E  V  F  P  Y  K  K  T  Y  H  C  S  F  F  F  Q  Y  *  *  Q  S  *  R  V  F  L  A  A  T  F  T  V  H  S  P  W  F  R  T  F  L  E  S  I  G  R  L  C  E  A  R  D  G  F  *  F  *  G  C  *  S  *  S  W  G  I  F  R  S  S  C  *  F  S  Q  E  W  P  S  F  A  A  T  F  S  V  *  V  V  S  *  V  L  E  L  E  Q  I  R  V  L  E   : G  R  Q  E  M  G  F  Q  K  S  W  C  I  H  S  L  Y  Y  S  Y  G  M  F  L  S  K  N  I  Y  G  N  S  S  S  Y  Y  *  *  G  K  K  R  T  Y  *  G  I  H  G  S  I  D  S  *  T  Y  S  C  *  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21058" stop="21573"/>
                    <exon start="21649" stop="21828"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>696</number_coding_nucleotides>
                  <number_encoded_amino_acids>232</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TPKPHSVFPTTKTGDNSVFPTSKRAETEALSSYSLSFSMHLTTTPPPQQLNSIQLSSKPLLLTLPFKCRRKFSRIRRPTIVASSSNTNNSPEGFSWLQLSQSIRRGSERFLNQLEDSVKQETGFDFKDVKVKVGEFSGRAVDSAKNGQVLLQRFQSELFPEFLNWNKFESWKDVKKWDSKRVGVFILYIIVTVCSCQKIYMAIRAPIINRERKELTEAYMEALIPEPTPVNV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="21092" e_stop="21857"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="21092" e_stop="21857" e_length="766"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21092" stop="21857"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317983" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21092" stop="21753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317746" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGACCGGCGACAATTCAGTTTTTCCGACGAGCAAGAGAGCCGAAACCGAAGCATTATCTTCGTATTCTCTAAGCTTCTCAATGCATCTAACCACTACTCCTCCTCCTCAACAGCTGAATTCAATACAATTATCTTCAAAACCCCTTTTACTCACATTGCCATTCAAATGCAGAAGGAAGTTTTCCCGTATAAGAAGACCTACCATTGTAGCTTCTTCTTCCAATACTAATAACAGTCCTGAAGGGTTTTCTTGGCTGCAACTTTCACAGTCCATTCGCCGTGGTTCCGAACGTTTCTTGAATCAATTGGAAGACTCTGTGAAGCAAGAGACGGGTTTTGATTTTAAGGATGTTAAAGTTAAAGTTGGGGAATTTTCAGGTCGAGCTGTTGATTCAGCCAAGAATGGCCAAGTTTTGCTGCAACGTTTTCAGTCTGAGTTGTTTCCTGAGTTCTTGAATTGGAACAAATTCGAGTCCTGGAAGGTGAATTTTCCCATTTCTTATTTGAGTTATTTGTATAACTTTGTGCTCACATTATCCTTTTTCCCCTTCCCCCAGGACGTCAAGAAATGGGATTCCAAAAGAGTTGGTGTATTCATTCTCTATATTATAGTTACGGTATGTTCTTGTCAAAAAATATATATGGCAATTCGAGCTCCTATTATTAATAGGGAAAGAAAAGAACTTACTGAGGCATACATGGAAGCATTGATTCCTGAACCTACTCCTGTTAATGTCAAAAGGTAAAACACAAATCAAACTGCTAA</gDNA_template>
            <first_frame> R  P  A  T  I  Q  F  F  R  R  A  R  E  P  K  P  K  H  Y  L  R  I  L  *  A  S  Q  C  I  *  P  L  L  L  L  L  N  S  *  I  Q  Y  N  Y  L  Q  N  P  F  Y  S  H  C  H  S  N  A  E  G  S  F  P  V  *  E  D  L  P  L  *  L  L  L  P  I  L  I  T  V  L  K  G  F  L  G  C  N  F  H  S  P  F  A  V  V  P  N  V  S  *  I  N  W  K  T  L  *  S  K  R  R  V  L  I  L  R  M  L  K  L  K  L  G  N  F  Q  V  E  L  L  I  Q  P  R  M  A  K  F  C  C  N  V  F  S  L  S  C  F  L  S  S  *  I  G  T  N  S  S  P  G  R  *  I  F  P  F  L  I  *  V  I  C  I  T  L  C  S  H  Y  P  F  S  P  S  P  R  T  S  R  N  G  I  P  K  E  L  V  Y  S  F  S  I  L  *  L  R  Y  V  L  V  K  K  Y  I  W  Q  F  E  L  L  L  L  I  G  K  E  K  N  L  L  R  H  T  W  K  H  *  F  L  N  L  L  L  L  M  S  K  G  K  T  Q  I  K  L  L  </first_frame>
            <second_frame>  D  R  R  Q  F  S  F  S  D  E  Q  E  S  R  N  R  S  I  I  F  V  F  S  K  L  L  N  A  S  N  H  Y  S  S  S  S  T  A  E  F  N  T  I  I  F  K  T  P  F  T  H  I  A  I  Q  M  Q  K  E  V  F  P  Y  K  K  T  Y  H  C  S  F  F  F  Q  Y  *  *  Q  S  *  R  V  F  L  A  A  T  F  T  V  H  S  P  W  F  R  T  F  L  E  S  I  G  R  L  C  E  A  R  D  G  F  *  F  *  G  C  *  S  *  S  W  G  I  F  R  S  S  C  *  F  S  Q  E  W  P  S  F  A  A  T  F  S  V  *  V  V  S  *  V  L  E  L  E  Q  I  R  V  L  E  G  E  F  S  H  F  L  F  E  L  F  V  *  L  C  A  H  I  I  L  F  P  L  P  P  G  R  Q  E  M  G  F  Q  K  S  W  C  I  H  S  L  Y  Y  S  Y  G  M  F  L  S  K  N  I  Y  G  N  S  S  S  Y  Y  *  *  G  K  K  R  T  Y  *  G  I  H  G  S  I  D  S  *  T  Y  S  C  *  C  Q  K  V  K  H  K  S  N  C  * </second_frame>
            <third_frame>   T  G  D  N  S  V  F  P  T  S  K  R  A  E  T  E  A  L  S  S  Y  S  L  S  F  S  M  H  L  T  T  T  P  P  P  Q  Q  L  N  S  I  Q  L  S  S  K  P  L  L  L  T  L  P  F  K  C  R  R  K  F  S  R  I  R  R  P  T  I  V  A  S  S  S  N  T  N  N  S  P  E  G  F  S  W  L  Q  L  S  Q  S  I  R  R  G  S  E  R  F  L  N  Q  L  E  D  S  V  K  Q  E  T  G  F  D  F  K  D  V  K  V  K  V  G  E  F  S  G  R  A  V  D  S  A  K  N  G  Q  V  L  L  Q  R  F  Q  S  E  L  F  P  E  F  L  N  W  N  K  F  E  S  W  K  V  N  F  P  I  S  Y  L  S  Y  L  Y  N  F  V  L  T  L  S  F  F  P  F  P  Q  D  V  K  K  W  D  S  K  R  V  G  V  F  I  L  Y  I  I  V  T  V  C  S  C  Q  K  I  Y  M  A  I  R  A  P  I  I  N  R  E  R  K  E  L  T  E  A  Y  M  E  A  L  I  P  E  P  T  P  V  N  V  K  R  *  N  T  N  Q  T  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21094" stop="21837"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>741</number_coding_nucleotides>
                  <number_encoded_amino_acids>247</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TGDNSVFPTSKRAETEALSSYSLSFSMHLTTTPPPQQLNSIQLSSKPLLLTLPFKCRRKFSRIRRPTIVASSSNTNNSPEGFSWLQLSQSIRRGSERFLNQLEDSVKQETGFDFKDVKVKVGEFSGRAVDSAKNGQVLLQRFQSELFPEFLNWNKFESWKVNFPISYLSYLYNFVLTLSFFPFPQDVKKWDSKRVGVFILYIIVTVCSCQKIYMAIRAPIINRERKELTEAYMEALIPEPTPVNVKR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="23849" PGL_stop="36931"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23849" e_stop="24064"/>
            <exon e_start="24439" e_stop="24516"/>
            <exon e_start="24607" e_stop="24849"/>
            <exon e_start="24947" e_stop="25083"/>
            <exon e_start="25168" e_stop="25335"/>
            <exon e_start="26552" e_stop="26664"/>
            <exon e_start="27327" e_stop="27543"/>
            <exon e_start="28898" e_stop="28969"/>
            <exon e_start="29983" e_stop="30102"/>
            <exon e_start="30185" e_stop="30301"/>
            <exon e_start="30396" e_stop="30572"/>
            <exon e_start="31312" e_stop="31431"/>
            <exon e_start="31540" e_stop="31614"/>
            <exon e_start="32292" e_stop="32399"/>
            <exon e_start="35981" e_stop="36061"/>
            <exon e_start="36413" e_stop="36823"/>
            <exon e_start="36918" e_stop="36931"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.928" acc_prob="0.000" e_score="0.996"/>
          <exon-intron don_prob="0.963" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.993" e_score="0.962"/>
          <exon-intron don_prob="0.996" acc_prob="0.880" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.946" e_score="0.991"/>
          <exon-intron don_prob="0.984" acc_prob="0.164" e_score="1.000"/>
          <exon-intron don_prob="0.918" acc_prob="0.998" e_score="0.992"/>
          <exon-intron don_prob="0.972" acc_prob="0.965" e_score="0.966"/>
          <exon-intron don_prob="0.966" acc_prob="0.998" e_score="0.994"/>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="0.975"/>
          <exon-intron don_prob="0.981" acc_prob="0.999" e_score="0.987"/>
          <exon-intron don_prob="0.989" acc_prob="0.998" e_score="0.972"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.970" e_score="1.000"/>
          <exon-only e_score="0.929"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="23849" e_stop="24064" e_length="216"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.995">
            <gDNA_intron_boundary i_start="24065" i_stop="24438" i_length="374"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24439" e_stop="24516" e_length="78"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.982">
            <gDNA_intron_boundary i_start="24517" i_stop="24606" i_length="90"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="24607" e_stop="24849" e_length="243"/>
          </exon>
          <intron i_serial="3" don_prob="0.928" acc_prob="0.000">
            <gDNA_intron_boundary i_start="24850" i_stop="24946" i_length="97"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="24947" e_stop="25083" e_length="137"/>
          </exon>
          <intron i_serial="4" don_prob="0.963" acc_prob="0.999">
            <gDNA_intron_boundary i_start="25084" i_stop="25167" i_length="84"/>
          </intron>
          <exon e_serial="5" e_score="0.962">
            <gDNA_exon_boundary e_start="25168" e_stop="25335" e_length="168"/>
          </exon>
          <intron i_serial="5" don_prob="0.991" acc_prob="0.993">
            <gDNA_intron_boundary i_start="25336" i_stop="26551" i_length="1216"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="26552" e_stop="26664" e_length="113"/>
          </exon>
          <intron i_serial="6" don_prob="0.996" acc_prob="0.880">
            <gDNA_intron_boundary i_start="26665" i_stop="27326" i_length="662"/>
          </intron>
          <exon e_serial="7" e_score="0.991">
            <gDNA_exon_boundary e_start="27327" e_stop="27543" e_length="217"/>
          </exon>
          <intron i_serial="7" don_prob="0.994" acc_prob="0.946">
            <gDNA_intron_boundary i_start="27544" i_stop="28897" i_length="1354"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="28898" e_stop="28969" e_length="72"/>
          </exon>
          <intron i_serial="8" don_prob="0.984" acc_prob="0.164">
            <gDNA_intron_boundary i_start="28970" i_stop="29982" i_length="1013"/>
          </intron>
          <exon e_serial="9" e_score="0.992">
            <gDNA_exon_boundary e_start="29983" e_stop="30102" e_length="120"/>
          </exon>
          <intron i_serial="9" don_prob="0.918" acc_prob="0.998">
            <gDNA_intron_boundary i_start="30103" i_stop="30184" i_length="82"/>
          </intron>
          <exon e_serial="10" e_score="0.966">
            <gDNA_exon_boundary e_start="30185" e_stop="30301" e_length="117"/>
          </exon>
          <intron i_serial="10" don_prob="0.972" acc_prob="0.965">
            <gDNA_intron_boundary i_start="30302" i_stop="30395" i_length="94"/>
          </intron>
          <exon e_serial="11" e_score="0.994">
            <gDNA_exon_boundary e_start="30396" e_stop="30572" e_length="177"/>
          </exon>
          <intron i_serial="11" don_prob="0.966" acc_prob="0.998">
            <gDNA_intron_boundary i_start="30573" i_stop="31311" i_length="739"/>
          </intron>
          <exon e_serial="12" e_score="0.975">
            <gDNA_exon_boundary e_start="31312" e_stop="31431" e_length="120"/>
          </exon>
          <intron i_serial="12" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="31432" i_stop="31539" i_length="108"/>
          </intron>
          <exon e_serial="13" e_score="0.987">
            <gDNA_exon_boundary e_start="31540" e_stop="31614" e_length="75"/>
          </exon>
          <intron i_serial="13" don_prob="0.981" acc_prob="0.999">
            <gDNA_intron_boundary i_start="31615" i_stop="32291" i_length="677"/>
          </intron>
          <exon e_serial="14" e_score="0.972">
            <gDNA_exon_boundary e_start="32292" e_stop="32399" e_length="108"/>
          </exon>
          <intron i_serial="14" don_prob="0.989" acc_prob="0.998">
            <gDNA_intron_boundary i_start="32400" i_stop="35980" i_length="3581"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="35981" e_stop="36061" e_length="81"/>
          </exon>
          <intron i_serial="15" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="36062" i_stop="36412" i_length="351"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="36413" e_stop="36823" e_length="411"/>
          </exon>
          <intron i_serial="16" don_prob="0.000" acc_prob="0.970">
            <gDNA_intron_boundary i_start="36824" i_stop="36917" i_length="94"/>
          </intron>
          <exon e_serial="17" e_score="0.929">
            <gDNA_exon_boundary e_start="36918" e_stop="36931" e_length="14"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23849" stop="24064"/>
              <exon start="24439" stop="24516"/>
              <exon start="24607" stop="24849"/>
              <exon start="24947" stop="25083"/>
              <exon start="25168" stop="25325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425616" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23849" stop="24064"/>
              <exon start="24439" stop="24516"/>
              <exon start="24607" stop="24849"/>
              <exon start="24947" stop="25083"/>
              <exon start="25168" stop="25255"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455024" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23866" stop="24064"/>
              <exon start="24439" stop="24516"/>
              <exon start="24607" stop="24717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25295" stop="25335"/>
              <exon start="26552" stop="26664"/>
              <exon start="27327" stop="27507"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26595" stop="26664"/>
              <exon start="27327" stop="27543"/>
              <exon start="28898" stop="28969"/>
              <exon start="29983" stop="30047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365904" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27370" stop="27543"/>
              <exon start="28898" stop="28969"/>
              <exon start="29983" stop="30102"/>
              <exon start="30185" stop="30301"/>
              <exon start="30396" stop="30572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464936" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30279" stop="30301"/>
              <exon start="30396" stop="30572"/>
              <exon start="31312" stop="31431"/>
              <exon start="31540" stop="31614"/>
              <exon start="32292" stop="32399"/>
              <exon start="35981" stop="36061"/>
              <exon start="36413" stop="36442"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E598608" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31318" stop="31431"/>
              <exon start="31540" stop="31614"/>
              <exon start="32292" stop="32399"/>
              <exon start="35981" stop="36061"/>
              <exon start="36413" stop="36808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425617" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32349" stop="32399"/>
              <exon start="35981" stop="36061"/>
              <exon start="36413" stop="36812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E607539" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36005" stop="36061"/>
              <exon start="36413" stop="36823"/>
              <exon start="36918" stop="36931"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294407" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGAAGGAGAAGATGGCAGAACAATTAGATTCAGTAAATGCGAGGTATGTGGTTGAATTTGACATGAAGGAAGTTGAGAACAGCCTTCGCAAAGATGTTGTTGAGAAGACAAGAGAAACTCAAGGAACCAGGGCATTGTGGATCTCGAAAAGATGGTGGAGATATCGCCCGAAACTTCCCTATACCTATTTTCTTCAAAAACTTGATACTTCTGAG : GTGGCTGCTATAGTCTTCACAGAGGATCTGAAGAGAGTGTTTGTCACAATGAAAGAAGGATTCCCTCTTGAATATATT : GTTGATATTCCACTAGATCCTTTCTTATTTGAGATGATATCAAGTTCTGGAGCTGAAGTAGATCTACTTCAGAAGCGGCAGATTCATTACTTTTTCAAAGTTCTTTTTGCTTTATTGCCTGGAATACTGATTTTGTGGTTTATAAGAGAATCTATGATGCTTCTGAACATCACGACAAATCGCCTCCTCTATAAGAAATATAAACAACTCTTCGATATGGCTTATGCTGAAAATTTTATTTTG : TTGGAGAAGTTGGTGAGACGAAATCGATGTATAAAGAAATAGTATTGGGAGGAGATGTTTGGGATCTTTTGGATGAATTGATGATTTATATGGGAAATCCAATGCAATATTATGAGAAAGATGTCAAATTTGTGCGG : GGTGTGCTTCTGTCTGGCCCCCCTGGAACAGGTAAAACACTGTTTGCTCGGACACTTGCAAAGGAAAGTGGGATGCCTTTTGTATTTGCTTCTGGTGCAGAGTTTACTGATAGTGAAAAGAGTGGTGCTGCACGAATCAATGAAATGTTTTCTGTTGCTAGGAGAAAT : GCTCCAGCTTTTGTATTTATAGATGAGATTGATGCTATTGCTGGAAGGCATGCAAGAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTGATTTCTCAGCTTGACGGGGA : GAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGTCATATTCATTTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGTCCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGAGTTCACAGTGCTGGGAAACAGCTTTCCGAGGATATTGCCTTTGAGAAA : CTTGTCTTTCGTACAGTTGGATATTCTGGGGCAGACATAAGAAATCTAGTCAATGAAGCTGGAATAATGTCT : GTAAGAAAAGGACATTCTAAGATCAACCAGCAGGATATCGTCGATGTTTTGGACAAGCAATTGCTTGAGGGTATGGGTGTTCTACTGACAGAGGAAGAGCAGCAGAAGTGTGAGCAAAGT : GTATCTCGCGAAAAAAGACAACTGTTGGCAGTACATGAAGCTGGTCACATTGTGTTGGCGCACTTGTTCCCTCAGTTTGATTGGCATGCTTTTTCTCAGCTTCTACCTGGGGGCAAG : GAAACTGCTGTATCAGTTTTCTACCCTAGAGAAGATGTGGTTGATCAAGGTTATACAACCTTTGGCTACATGAAAATGCAAATGGTAGTAGCTCATGGCGGGCGCTGTGCCGAACGTATTGTATTTGGTGATGACATTACTGATGGAGGAGTAGATGATCTAGAAAAGATTACCAAG : ATTGCTCGGGAAATGGTGATAAGTCCTAGAAACTCTAGGTTGGGCCTCACTTCTTTGACAAAAAAAATAGGATTGGGTGATCGACCTGACAATCCTGATGGTGAGATTATAAAATATAAG : TGGGATGATCCTCATATAGTTCCTGCTGATATGACAGTTGAAGTTGCTGAGCTATTTACTCGTGAATTGACAAGG : TATATTGATGAGACGGAAGAACTTGCAATGAGGGGGTTATTGGCCAACAGACATATACTGGACTTGATTTCCAATGAGCTTCTTGAACACTCAAGAATAACTGGATTG : GAAGTAGAAGACAAAATGAGAGGGTTACAGCCTGCCATGTTCGAAGATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAG : GAAGGACCATTGCCTCATAATGACCGTTTGAGTTATCAACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAACATCAATGGTGGTTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTAATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTATATAAGTTAATGTTAA : GTAAAAAGAAAAAA</gDNA_template>
            <first_frame> R  K  E  K  M  A  E  Q  L  D  S  V  N  A  R  Y  V  V  E  F  D  M  K  E  V  E  N  S  L  R  K  D  V  V  E  K  T  R  E  T  Q  G  T  R  A  L  W  I  S  K  R  W  W  R  Y  R  P  K  L  P  Y  T  Y  F  L  Q  K  L  D  T  S  E  :  V  A  A  I  V  F  T  E  D  L  K  R  V  F  V  T  M  K  E  G  F  P  L  E  Y  I  :  V  D  I  P  L  D  P  F  L  F  E  M  I  S  S  S  G  A  E  V  D  L  L  Q  K  R  Q  I  H  Y  F  F  K  V  L  F  A  L  L  P  G  I  L  I  L  W  F  I  R  E  S  M  M  L  L  N  I  T  T  N  R  L  L  Y  K  K  Y  K  Q  L  F  D  M  A  Y  A  E  N  F  I  L  :  L  E  K  L  V  R  R  N  R  C  I  K  K  *  Y  W  E  E  M  F  G  I  F  W  M  N  *  *  F  I  W  E  I  Q  C  N  I  M  R  K  M  S  N  L  C  G :   V  C  F  C  L  A  P  L  E  Q  V  K  H  C  L  L  G  H  L  Q  R  K  V  G  C  L  L  Y  L  L  L  V  Q  S  L  L  I  V  K  R  V  V  L  H  E  S  M  K  C  F  L  L  L  G  E  M :   L  Q  L  L  Y  L  *  M  R  L  M  L  L  L  E  G  M  Q  E  R  I  H  A  G  R  Q  H  L  R  L  *  F  L  S  L  T  G   : R  K  K  K  L  V  L  I  G  F  H  *  D  K  L  S  Y  S  F  V  Q  P  I  G  Q  M  N  W  T  *  N  L  S  A  L  D  V  L  T  D  V  C  I  L  V  Y  Q  M  Q  S  N  E  C  K  F  L  E  F  T  V  L  G  N  S  F  P  R  I  L  P  L  R  N :   L  S  F  V  Q  L  D  I  L  G  Q  T  *  E  I  *  S  M  K  L  E  *  C  L :   *  E  K  D  I  L  R  S  T  S  R  I  S  S  M  F  W  T  S  N  C  L  R  V  W  V  F  Y  *  Q  R  K  S  S  R  S  V  S  K  V :   Y  L  A  K  K  D  N  C  W  Q  Y  M  K  L  V  T  L  C  W  R  T  C  S  L  S  L  I  G  M  L  F  L  S  F  Y  L  G  A  R :   K  L  L  Y  Q  F  S  T  L  E  K  M  W  L  I  K  V  I  Q  P  L  A  T  *  K  C  K  W  *  *  L  M  A  G  A  V  P  N  V  L  Y  L  V  M  T  L  L  M  E  E  *  M  I  *  K  R  L  P  R :   L  L  G  K  W  *  *  V  L  E  T  L  G  W  A  S  L  L  *  Q  K  K  *  D  W  V  I  D  L  T  I  L  M  V  R  L  *  N  I  S :   G  M  I  L  I  *  F  L  L  I  *  Q  L  K  L  L  S  Y  L  L  V  N  *  Q  G :   I  L  M  R  R  K  N  L  Q  *  G  G  Y  W  P  T  D  I  Y  W  T  *  F  P  M  S  F  L  N  T  Q  E  *  L  D  W :   K  *  K  T  K  *  E  G  Y  S  L  P  C  S  K  I  L  *  S  L  S  K  *  T  W  R  R :   K  D  H  C  L  I  M  T  V  *  V  I  N  R  W  T  F  I  L  R  P  S  T  E  V  N  I  N  G  G  C  L  S  F  L  V  R  P  T  S  E  V  A  *  *  *  M  L  R  F  R  D  N  V  L  F  H  I  N  S  D  Q  N  L  C  K  P  T  E  R  L  L  S  R  *  *  G  W  V  A  N  V  P  F  F  I  I  *  A  H  F  C  F  F  F  P  S  F  A  L  F  S  F  P  L  I  Y  F  M  V  *  I  E  Q  L  C  T  R  K  T  N  E  N  R  K  C  K  I  W  L  F  I  *  V  N  V  K :   *  K  E  K  </first_frame>
            <second_frame>  G  R  R  R  W  Q  N  N  *  I  Q  *  M  R  G  M  W  L  N  L  T  *  R  K  L  R  T  A  F  A  K  M  L  L  R  R  Q  E  K  L  K  E  P  G  H  C  G  S  R  K  D  G  G  D  I  A  R  N  F  P  I  P  I  F  F  K  N  L  I  L  L  R :   W  L  L  *  S  S  Q  R  I  *  R  E  C  L  S  Q  *  K  K  D  S  L  L  N  I  L :   L  I  F  H  *  I  L  S  Y  L  R  *  Y  Q  V  L  E  L  K  *  I  Y  F  R  S  G  R  F  I  T  F  S  K  F  F  L  L  Y  C  L  E  Y  *  F  C  G  L  *  E  N  L  *  C  F  *  T  S  R  Q  I  A  S  S  I  R  N  I  N  N  S  S  I  W  L  M  L  K  I  L  F  C :   W  R  S  W  *  D  E  I  D  V  *  R  N  S  I  G  R  R  C  L  G  S  F  G  *  I  D  D  L  Y  G  K  S  N  A  I  L  *  E  R  C  Q  I  C  A   : G  C  A  S  V  W  P  P  W  N  R  *  N  T  V  C  S  D  T  C  K  G  K  W  D  A  F  C  I  C  F  W  C  R  V  Y  *  *  *  K  E  W  C  C  T  N  Q  *  N  V  F  C  C  *  E  K   : C  S  S  F  C  I  Y  R  *  D  *  C  Y  C  W  K  A  C  K  K  G  S  T  Q  E  G  N  I  *  G  S  D  F  S  A  *  R  G  :  E  R  K  N  W  C  *  *  V  F  T  K  T  S  C  H  I  H  L  C  N  Q  S  A  R  *  T  G  L  R  I  C  P  P  W  T  Y  *  Q  T  C  V  Y  W  F  T  R  C  K  A  T  S  A  N  F  W  S  S  Q  C  W  E  T  A  F  R  G  Y  C  L  *  E   : T  C  L  S  Y  S  W  I  F  W  G  R  H  K  K  S  S  Q  *  S  W  N  N  V   : C  K  K  R  T  F  *  D  Q  P  A  G  Y  R  R  C  F  G  Q  A  I  A  *  G  Y  G  C  S  T  D  R  G  R  A  A  E  V  *  A  K   : C  I  S  R  K  K  T  T  V  G  S  T  *  S  W  S  H  C  V  G  A  L  V  P  S  V  *  L  A  C  F  F  S  A  S  T  W  G  Q   : G  N  C  C  I  S  F  L  P  *  R  R  C  G  *  S  R  L  Y  N  L  W  L  H  E  N  A  N  G  S  S  S  W  R  A  L  C  R  T  Y  C  I  W  *  *  H  Y  *  W  R  S  R  *  S  R  K  D  Y  Q   : D  C  S  G  N  G  D  K  S  *  K  L  *  V  G  P  H  F  F  D  K  K  N  R  I  G  *  S  T  *  Q  S  *  W  *  D  Y  K  I  *   : V  G  *  S  S  Y  S  S  C  *  Y  D  S  *  S  C  *  A  I  Y  S  *  I  D  K   : V  Y  *  *  D  G  R  T  C  N  E  G  V  I  G  Q  Q  T  Y  T  G  L  D  F  Q  *  A  S  *  T  L  K  N  N  W  I   : G  S  R  R  Q  N  E  R  V  T  A  C  H  V  R  R  F  C  E  A  F  P  N  K  H  G  G   : G  R  T  I  A  S  *  *  P  F  E  L  S  T  A  G  H  L  S  C  A  P  P  Q  K  L  T  S  M  V  V  V  *  V  F  W  S  D  R  H  R  K  L  P  S  S  E  C  *  G  L  E  T  M  S  F  F  T  S  T  L  T  K  T  F  A  N  Q  Q  K  G  C  L  V  D  S  K  V  G  L  Q  M  F  H  F  L  L  F  R  H  I  F  V  S  S  F  L  L  L  L  S  F  L  F  P  *  F  I  S  W  F  K  *  S  N  F  V  Q  E  R  P  M  R  I  E  N  V  K  F  G  Y  L  Y  K  L  M  L   : S  K  K  K  K </second_frame>
            <third_frame>   E  G  E  D  G  R  T  I  R  F  S  K  C  E  V  C  G  *  I  *  H  E  G  S  *  E  Q  P  S  Q  R  C  C  *  E  D  K  R  N  S  R  N  Q  G  I  V  D  L  E  K  M  V  E  I  S  P  E  T  S  L  Y  L  F  S  S  K  T  *  Y  F  *   : G  G  C  Y  S  L  H  R  G  S  E  E  S  V  C  H  N  E  R  R  I  P  S  *  I  Y   : C  *  Y  S  T  R  S  F  L  I  *  D  D  I  K  F  W  S  *  S  R  S  T  S  E  A  A  D  S  L  L  F  Q  S  S  F  C  F  I  A  W  N  T  D  F  V  V  Y  K  R  I  Y  D  A  S  E  H  H  D  K  S  P  P  L  *  E  I  *  T  T  L  R  Y  G  L  C  *  K  F  Y  F   : V  G  E  V  G  E  T  K  S  M  Y  K  E  I  V  L  G  G  D  V  W  D  L  L  D  E  L  M  I  Y  M  G  N  P  M  Q  Y  Y  E  K  D  V  K  F  V  R  :  G  V  L  L  S  G  P  P  G  T  G  K  T  L  F  A  R  T  L  A  K  E  S  G  M  P  F  V  F  A  S  G  A  E  F  T  D  S  E  K  S  G  A  A  R  I  N  E  M  F  S  V  A  R  R  N  :  A  P  A  F  V  F  I  D  E  I  D  A  I  A  G  R  H  A  R  K  D  P  R  R  K  A  T  F  E  A  L  I  S  Q  L  D  G  E :   K  E  K  T  G  V  D  R  F  S  L  R  Q  A  V  I  F  I  C  A  T  N  R  P  D  E  L  D  L  E  F  V  R  P  G  R  I  D  R  R  V  Y  I  G  L  P  D  A  K  Q  R  V  Q  I  F  G  V  H  S  A  G  K  Q  L  S  E  D  I  A  F  E  K  :  L  V  F  R  T  V  G  Y  S  G  A  D  I  R  N  L  V  N  E  A  G  I  M  S  :  V  R  K  G  H  S  K  I  N  Q  Q  D  I  V  D  V  L  D  K  Q  L  L  E  G  M  G  V  L  L  T  E  E  E  Q  Q  K  C  E  Q  S  :  V  S  R  E  K  R  Q  L  L  A  V  H  E  A  G  H  I  V  L  A  H  L  F  P  Q  F  D  W  H  A  F  S  Q  L  L  P  G  G  K  :  E  T  A  V  S  V  F  Y  P  R  E  D  V  V  D  Q  G  Y  T  T  F  G  Y  M  K  M  Q  M  V  V  A  H  G  G  R  C  A  E  R  I  V  F  G  D  D  I  T  D  G  G  V  D  D  L  E  K  I  T  K  :  I  A  R  E  M  V  I  S  P  R  N  S  R  L  G  L  T  S  L  T  K  K  I  G  L  G  D  R  P  D  N  P  D  G  E  I  I  K  Y  K  :  W  D  D  P  H  I  V  P  A  D  M  T  V  E  V  A  E  L  F  T  R  E  L  T  R  :  Y  I  D  E  T  E  E  L  A  M  R  G  L  L  A  N  R  H  I  L  D  L  I  S  N  E  L  L  E  H  S  R  I  T  G  L  :  E  V  E  D  K  M  R  G  L  Q  P  A  M  F  E  D  F  V  K  P  F  Q  I  N  M  E  E  :  E  G  P  L  P  H  N  D  R  L  S  Y  Q  P  L  D  I  Y  P  A  P  L  H  R  S  *  H  Q  W  W  L  F  E  F  S  G  Q  T  D  I  G  S  C  L  V  V  N  V  E  V  *  R  Q  C  P  F  S  H  Q  L  *  P  K  P  L  Q  T  N  R  K  A  A  *  *  I  V  R  L  G  C  K  C  S  I  F  Y  Y  L  G  T  F  L  F  L  L  S  F  F  C  S  L  F  F  S  L  N  L  F  H  G  L  N  R  A  T  L  Y  K  K  D  Q  *  E  S  K  M  *  N  L  A  I  Y  I  S  *  C  *  :  V  K  R  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24837" stop="24849"/>
                    <exon start="24947" stop="25083"/>
                    <exon start="25168" stop="25335"/>
                    <exon start="26552" stop="26664"/>
                    <exon start="27327" stop="27543"/>
                    <exon start="28898" stop="28969"/>
                    <exon start="29983" stop="30102"/>
                    <exon start="30185" stop="30301"/>
                    <exon start="30396" stop="30572"/>
                    <exon start="31312" stop="31431"/>
                    <exon start="31540" stop="31614"/>
                    <exon start="32292" stop="32399"/>
                    <exon start="35981" stop="36061"/>
                    <exon start="36413" stop="36490"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1593</number_coding_nucleotides>
                  <number_encoded_amino_acids>531</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KFYFVGEVGETKSMYKEIVLGGDVWDLLDELMIYMGNPMQYYEKDVKFVRGVLLSGPPGTGKTLFARTLAKESGMPFVFASGAEFTDSEKSGAARINEMFSVARRNAPAFVFIDEIDAIAGRHARKDPRRKATFEALISQLDGEKEKTGVDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRVYIGLPDAKQRVQIFGVHSAGKQLSEDIAFEKLVFRTVGYSGADIRNLVNEAGIMSVRKGHSKINQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSREKRQLLAVHEAGHIVLAHLFPQFDWHAFSQLLPGGKETAVSVFYPREDVVDQGYTTFGYMKMQMVVAHGGRCAERIVFGDDITDGGVDDLEKITKIAREMVISPRNSRLGLTSLTKKIGLGDRPDNPDGEIIKYKWDDPHIVPADMTVEVAELFTRELTRYIDETEELAMRGLLANRHILDLISNELLEHSRITGLEVEDKMRGLQPAMFEDFVKPFQINMEEEGPLPHNDRLSYQPLDIYPAPLHRS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="23849" e_stop="24064"/>
            <exon e_start="24439" e_stop="24516"/>
            <exon e_start="24607" e_stop="24849"/>
            <exon e_start="24947" e_stop="25083"/>
            <exon e_start="25168" e_stop="25335"/>
            <exon e_start="26552" e_stop="26664"/>
            <exon e_start="27327" e_stop="27543"/>
            <exon e_start="28898" e_stop="28969"/>
            <exon e_start="29983" e_stop="30102"/>
            <exon e_start="30185" e_stop="30301"/>
            <exon e_start="30396" e_stop="30572"/>
            <exon e_start="31312" e_stop="31431"/>
            <exon e_start="31540" e_stop="31614"/>
            <exon e_start="32292" e_stop="32399"/>
            <exon e_start="35981" e_stop="36061"/>
            <exon e_start="36413" e_stop="36833"/>
            <exon e_start="36918" e_stop="36929"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.928" acc_prob="0.000" e_score="0.996"/>
          <exon-intron don_prob="0.963" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.993" e_score="0.962"/>
          <exon-intron don_prob="0.996" acc_prob="0.880" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.946" e_score="0.991"/>
          <exon-intron don_prob="0.984" acc_prob="0.164" e_score="1.000"/>
          <exon-intron don_prob="0.918" acc_prob="0.998" e_score="0.992"/>
          <exon-intron don_prob="0.972" acc_prob="0.965" e_score="0.966"/>
          <exon-intron don_prob="0.966" acc_prob="0.998" e_score="0.994"/>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="0.975"/>
          <exon-intron don_prob="0.981" acc_prob="0.999" e_score="0.987"/>
          <exon-intron don_prob="0.989" acc_prob="0.998" e_score="0.972"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="0.975"/>
          <exon-intron don_prob="0.000" acc_prob="0.970" e_score="0.992"/>
          <exon-only e_score="0.750"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="23849" e_stop="24064" e_length="216"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.995">
            <gDNA_intron_boundary i_start="24065" i_stop="24438" i_length="374"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24439" e_stop="24516" e_length="78"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.982">
            <gDNA_intron_boundary i_start="24517" i_stop="24606" i_length="90"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="24607" e_stop="24849" e_length="243"/>
          </exon>
          <intron i_serial="3" don_prob="0.928" acc_prob="0.000">
            <gDNA_intron_boundary i_start="24850" i_stop="24946" i_length="97"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="24947" e_stop="25083" e_length="137"/>
          </exon>
          <intron i_serial="4" don_prob="0.963" acc_prob="0.999">
            <gDNA_intron_boundary i_start="25084" i_stop="25167" i_length="84"/>
          </intron>
          <exon e_serial="5" e_score="0.962">
            <gDNA_exon_boundary e_start="25168" e_stop="25335" e_length="168"/>
          </exon>
          <intron i_serial="5" don_prob="0.991" acc_prob="0.993">
            <gDNA_intron_boundary i_start="25336" i_stop="26551" i_length="1216"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="26552" e_stop="26664" e_length="113"/>
          </exon>
          <intron i_serial="6" don_prob="0.996" acc_prob="0.880">
            <gDNA_intron_boundary i_start="26665" i_stop="27326" i_length="662"/>
          </intron>
          <exon e_serial="7" e_score="0.991">
            <gDNA_exon_boundary e_start="27327" e_stop="27543" e_length="217"/>
          </exon>
          <intron i_serial="7" don_prob="0.994" acc_prob="0.946">
            <gDNA_intron_boundary i_start="27544" i_stop="28897" i_length="1354"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="28898" e_stop="28969" e_length="72"/>
          </exon>
          <intron i_serial="8" don_prob="0.984" acc_prob="0.164">
            <gDNA_intron_boundary i_start="28970" i_stop="29982" i_length="1013"/>
          </intron>
          <exon e_serial="9" e_score="0.992">
            <gDNA_exon_boundary e_start="29983" e_stop="30102" e_length="120"/>
          </exon>
          <intron i_serial="9" don_prob="0.918" acc_prob="0.998">
            <gDNA_intron_boundary i_start="30103" i_stop="30184" i_length="82"/>
          </intron>
          <exon e_serial="10" e_score="0.966">
            <gDNA_exon_boundary e_start="30185" e_stop="30301" e_length="117"/>
          </exon>
          <intron i_serial="10" don_prob="0.972" acc_prob="0.965">
            <gDNA_intron_boundary i_start="30302" i_stop="30395" i_length="94"/>
          </intron>
          <exon e_serial="11" e_score="0.994">
            <gDNA_exon_boundary e_start="30396" e_stop="30572" e_length="177"/>
          </exon>
          <intron i_serial="11" don_prob="0.966" acc_prob="0.998">
            <gDNA_intron_boundary i_start="30573" i_stop="31311" i_length="739"/>
          </intron>
          <exon e_serial="12" e_score="0.975">
            <gDNA_exon_boundary e_start="31312" e_stop="31431" e_length="120"/>
          </exon>
          <intron i_serial="12" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="31432" i_stop="31539" i_length="108"/>
          </intron>
          <exon e_serial="13" e_score="0.987">
            <gDNA_exon_boundary e_start="31540" e_stop="31614" e_length="75"/>
          </exon>
          <intron i_serial="13" don_prob="0.981" acc_prob="0.999">
            <gDNA_intron_boundary i_start="31615" i_stop="32291" i_length="677"/>
          </intron>
          <exon e_serial="14" e_score="0.972">
            <gDNA_exon_boundary e_start="32292" e_stop="32399" e_length="108"/>
          </exon>
          <intron i_serial="14" don_prob="0.989" acc_prob="0.998">
            <gDNA_intron_boundary i_start="32400" i_stop="35980" i_length="3581"/>
          </intron>
          <exon e_serial="15" e_score="0.975">
            <gDNA_exon_boundary e_start="35981" e_stop="36061" e_length="81"/>
          </exon>
          <intron i_serial="15" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="36062" i_stop="36412" i_length="351"/>
          </intron>
          <exon e_serial="16" e_score="0.992">
            <gDNA_exon_boundary e_start="36413" e_stop="36833" e_length="421"/>
          </exon>
          <intron i_serial="16" don_prob="0.000" acc_prob="0.970">
            <gDNA_intron_boundary i_start="36834" i_stop="36917" i_length="84"/>
          </intron>
          <exon e_serial="17" e_score="0.750">
            <gDNA_exon_boundary e_start="36918" e_stop="36929" e_length="12"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23849" stop="24064"/>
              <exon start="24439" stop="24516"/>
              <exon start="24607" stop="24849"/>
              <exon start="24947" stop="25083"/>
              <exon start="25168" stop="25325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425616" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23849" stop="24064"/>
              <exon start="24439" stop="24516"/>
              <exon start="24607" stop="24849"/>
              <exon start="24947" stop="25083"/>
              <exon start="25168" stop="25255"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455024" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23866" stop="24064"/>
              <exon start="24439" stop="24516"/>
              <exon start="24607" stop="24717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25295" stop="25335"/>
              <exon start="26552" stop="26664"/>
              <exon start="27327" stop="27507"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26595" stop="26664"/>
              <exon start="27327" stop="27543"/>
              <exon start="28898" stop="28969"/>
              <exon start="29983" stop="30047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365904" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27370" stop="27543"/>
              <exon start="28898" stop="28969"/>
              <exon start="29983" stop="30102"/>
              <exon start="30185" stop="30301"/>
              <exon start="30396" stop="30572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464936" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30279" stop="30301"/>
              <exon start="30396" stop="30572"/>
              <exon start="31312" stop="31431"/>
              <exon start="31540" stop="31614"/>
              <exon start="32292" stop="32399"/>
              <exon start="35981" stop="36061"/>
              <exon start="36413" stop="36442"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E598608" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31318" stop="31431"/>
              <exon start="31540" stop="31614"/>
              <exon start="32292" stop="32399"/>
              <exon start="35981" stop="36061"/>
              <exon start="36413" stop="36808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425617" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32349" stop="32399"/>
              <exon start="35981" stop="36061"/>
              <exon start="36413" stop="36812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E607539" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36439" stop="36833"/>
              <exon start="36918" stop="36929"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341394" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGAAGGAGAAGATGGCAGAACAATTAGATTCAGTAAATGCGAGGTATGTGGTTGAATTTGACATGAAGGAAGTTGAGAACAGCCTTCGCAAAGATGTTGTTGAGAAGACAAGAGAAACTCAAGGAACCAGGGCATTGTGGATCTCGAAAAGATGGTGGAGATATCGCCCGAAACTTCCCTATACCTATTTTCTTCAAAAACTTGATACTTCTGAG : GTGGCTGCTATAGTCTTCACAGAGGATCTGAAGAGAGTGTTTGTCACAATGAAAGAAGGATTCCCTCTTGAATATATT : GTTGATATTCCACTAGATCCTTTCTTATTTGAGATGATATCAAGTTCTGGAGCTGAAGTAGATCTACTTCAGAAGCGGCAGATTCATTACTTTTTCAAAGTTCTTTTTGCTTTATTGCCTGGAATACTGATTTTGTGGTTTATAAGAGAATCTATGATGCTTCTGAACATCACGACAAATCGCCTCCTCTATAAGAAATATAAACAACTCTTCGATATGGCTTATGCTGAAAATTTTATTTTG : TTGGAGAAGTTGGTGAGACGAAATCGATGTATAAAGAAATAGTATTGGGAGGAGATGTTTGGGATCTTTTGGATGAATTGATGATTTATATGGGAAATCCAATGCAATATTATGAGAAAGATGTCAAATTTGTGCGG : GGTGTGCTTCTGTCTGGCCCCCCTGGAACAGGTAAAACACTGTTTGCTCGGACACTTGCAAAGGAAAGTGGGATGCCTTTTGTATTTGCTTCTGGTGCAGAGTTTACTGATAGTGAAAAGAGTGGTGCTGCACGAATCAATGAAATGTTTTCTGTTGCTAGGAGAAAT : GCTCCAGCTTTTGTATTTATAGATGAGATTGATGCTATTGCTGGAAGGCATGCAAGAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTGATTTCTCAGCTTGACGGGGA : GAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGTCATATTCATTTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGTCCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGAGTTCACAGTGCTGGGAAACAGCTTTCCGAGGATATTGCCTTTGAGAAA : CTTGTCTTTCGTACAGTTGGATATTCTGGGGCAGACATAAGAAATCTAGTCAATGAAGCTGGAATAATGTCT : GTAAGAAAAGGACATTCTAAGATCAACCAGCAGGATATCGTCGATGTTTTGGACAAGCAATTGCTTGAGGGTATGGGTGTTCTACTGACAGAGGAAGAGCAGCAGAAGTGTGAGCAAAGT : GTATCTCGCGAAAAAAGACAACTGTTGGCAGTACATGAAGCTGGTCACATTGTGTTGGCGCACTTGTTCCCTCAGTTTGATTGGCATGCTTTTTCTCAGCTTCTACCTGGGGGCAAG : GAAACTGCTGTATCAGTTTTCTACCCTAGAGAAGATGTGGTTGATCAAGGTTATACAACCTTTGGCTACATGAAAATGCAAATGGTAGTAGCTCATGGCGGGCGCTGTGCCGAACGTATTGTATTTGGTGATGACATTACTGATGGAGGAGTAGATGATCTAGAAAAGATTACCAAG : ATTGCTCGGGAAATGGTGATAAGTCCTAGAAACTCTAGGTTGGGCCTCACTTCTTTGACAAAAAAAATAGGATTGGGTGATCGACCTGACAATCCTGATGGTGAGATTATAAAATATAAG : TGGGATGATCCTCATATAGTTCCTGCTGATATGACAGTTGAAGTTGCTGAGCTATTTACTCGTGAATTGACAAGG : TATATTGATGAGACGGAAGAACTTGCAATGAGGGGGTTATTGGCCAACAGACATATACTGGACTTGATTTCCAATGAGCTTCTTGAACACTCAAGAATAACTGGATTG : GAAGTAGAAGACAAAATGAGAGGGTTACAGCCTGCCATGTTCGAAGATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAG : GAAGGACCATTGCCTCATAATGACCGTTTGAGTTATCAACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAACATCAATGGTGGTTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTAATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTATATAAGTTAATGTTAAGTATATATTC : GTAAAAAGAAAA</gDNA_template>
            <first_frame> R  K  E  K  M  A  E  Q  L  D  S  V  N  A  R  Y  V  V  E  F  D  M  K  E  V  E  N  S  L  R  K  D  V  V  E  K  T  R  E  T  Q  G  T  R  A  L  W  I  S  K  R  W  W  R  Y  R  P  K  L  P  Y  T  Y  F  L  Q  K  L  D  T  S  E  :  V  A  A  I  V  F  T  E  D  L  K  R  V  F  V  T  M  K  E  G  F  P  L  E  Y  I  :  V  D  I  P  L  D  P  F  L  F  E  M  I  S  S  S  G  A  E  V  D  L  L  Q  K  R  Q  I  H  Y  F  F  K  V  L  F  A  L  L  P  G  I  L  I  L  W  F  I  R  E  S  M  M  L  L  N  I  T  T  N  R  L  L  Y  K  K  Y  K  Q  L  F  D  M  A  Y  A  E  N  F  I  L  :  L  E  K  L  V  R  R  N  R  C  I  K  K  *  Y  W  E  E  M  F  G  I  F  W  M  N  *  *  F  I  W  E  I  Q  C  N  I  M  R  K  M  S  N  L  C  G :   V  C  F  C  L  A  P  L  E  Q  V  K  H  C  L  L  G  H  L  Q  R  K  V  G  C  L  L  Y  L  L  L  V  Q  S  L  L  I  V  K  R  V  V  L  H  E  S  M  K  C  F  L  L  L  G  E  M :   L  Q  L  L  Y  L  *  M  R  L  M  L  L  L  E  G  M  Q  E  R  I  H  A  G  R  Q  H  L  R  L  *  F  L  S  L  T  G   : R  K  K  K  L  V  L  I  G  F  H  *  D  K  L  S  Y  S  F  V  Q  P  I  G  Q  M  N  W  T  *  N  L  S  A  L  D  V  L  T  D  V  C  I  L  V  Y  Q  M  Q  S  N  E  C  K  F  L  E  F  T  V  L  G  N  S  F  P  R  I  L  P  L  R  N :   L  S  F  V  Q  L  D  I  L  G  Q  T  *  E  I  *  S  M  K  L  E  *  C  L :   *  E  K  D  I  L  R  S  T  S  R  I  S  S  M  F  W  T  S  N  C  L  R  V  W  V  F  Y  *  Q  R  K  S  S  R  S  V  S  K  V :   Y  L  A  K  K  D  N  C  W  Q  Y  M  K  L  V  T  L  C  W  R  T  C  S  L  S  L  I  G  M  L  F  L  S  F  Y  L  G  A  R :   K  L  L  Y  Q  F  S  T  L  E  K  M  W  L  I  K  V  I  Q  P  L  A  T  *  K  C  K  W  *  *  L  M  A  G  A  V  P  N  V  L  Y  L  V  M  T  L  L  M  E  E  *  M  I  *  K  R  L  P  R :   L  L  G  K  W  *  *  V  L  E  T  L  G  W  A  S  L  L  *  Q  K  K  *  D  W  V  I  D  L  T  I  L  M  V  R  L  *  N  I  S :   G  M  I  L  I  *  F  L  L  I  *  Q  L  K  L  L  S  Y  L  L  V  N  *  Q  G :   I  L  M  R  R  K  N  L  Q  *  G  G  Y  W  P  T  D  I  Y  W  T  *  F  P  M  S  F  L  N  T  Q  E  *  L  D  W :   K  *  K  T  K  *  E  G  Y  S  L  P  C  S  K  I  L  *  S  L  S  K  *  T  W  R  R :   K  D  H  C  L  I  M  T  V  *  V  I  N  R  W  T  F  I  L  R  P  S  T  E  V  N  I  N  G  G  C  L  S  F  L  V  R  P  T  S  E  V  A  *  *  *  M  L  R  F  R  D  N  V  L  F  H  I  N  S  D  Q  N  L  C  K  P  T  E  R  L  L  S  R  *  *  G  W  V  A  N  V  P  F  F  I  I  *  A  H  F  C  F  F  F  P  S  F  A  L  F  S  F  P  L  I  Y  F  M  V  *  I  E  Q  L  C  T  R  K  T  N  E  N  R  K  C  K  I  W  L  F  I  *  V  N  V  K  Y  I  F  :  V  K  R  K </first_frame>
            <second_frame>  G  R  R  R  W  Q  N  N  *  I  Q  *  M  R  G  M  W  L  N  L  T  *  R  K  L  R  T  A  F  A  K  M  L  L  R  R  Q  E  K  L  K  E  P  G  H  C  G  S  R  K  D  G  G  D  I  A  R  N  F  P  I  P  I  F  F  K  N  L  I  L  L  R :   W  L  L  *  S  S  Q  R  I  *  R  E  C  L  S  Q  *  K  K  D  S  L  L  N  I  L :   L  I  F  H  *  I  L  S  Y  L  R  *  Y  Q  V  L  E  L  K  *  I  Y  F  R  S  G  R  F  I  T  F  S  K  F  F  L  L  Y  C  L  E  Y  *  F  C  G  L  *  E  N  L  *  C  F  *  T  S  R  Q  I  A  S  S  I  R  N  I  N  N  S  S  I  W  L  M  L  K  I  L  F  C :   W  R  S  W  *  D  E  I  D  V  *  R  N  S  I  G  R  R  C  L  G  S  F  G  *  I  D  D  L  Y  G  K  S  N  A  I  L  *  E  R  C  Q  I  C  A   : G  C  A  S  V  W  P  P  W  N  R  *  N  T  V  C  S  D  T  C  K  G  K  W  D  A  F  C  I  C  F  W  C  R  V  Y  *  *  *  K  E  W  C  C  T  N  Q  *  N  V  F  C  C  *  E  K   : C  S  S  F  C  I  Y  R  *  D  *  C  Y  C  W  K  A  C  K  K  G  S  T  Q  E  G  N  I  *  G  S  D  F  S  A  *  R  G  :  E  R  K  N  W  C  *  *  V  F  T  K  T  S  C  H  I  H  L  C  N  Q  S  A  R  *  T  G  L  R  I  C  P  P  W  T  Y  *  Q  T  C  V  Y  W  F  T  R  C  K  A  T  S  A  N  F  W  S  S  Q  C  W  E  T  A  F  R  G  Y  C  L  *  E   : T  C  L  S  Y  S  W  I  F  W  G  R  H  K  K  S  S  Q  *  S  W  N  N  V   : C  K  K  R  T  F  *  D  Q  P  A  G  Y  R  R  C  F  G  Q  A  I  A  *  G  Y  G  C  S  T  D  R  G  R  A  A  E  V  *  A  K   : C  I  S  R  K  K  T  T  V  G  S  T  *  S  W  S  H  C  V  G  A  L  V  P  S  V  *  L  A  C  F  F  S  A  S  T  W  G  Q   : G  N  C  C  I  S  F  L  P  *  R  R  C  G  *  S  R  L  Y  N  L  W  L  H  E  N  A  N  G  S  S  S  W  R  A  L  C  R  T  Y  C  I  W  *  *  H  Y  *  W  R  S  R  *  S  R  K  D  Y  Q   : D  C  S  G  N  G  D  K  S  *  K  L  *  V  G  P  H  F  F  D  K  K  N  R  I  G  *  S  T  *  Q  S  *  W  *  D  Y  K  I  *   : V  G  *  S  S  Y  S  S  C  *  Y  D  S  *  S  C  *  A  I  Y  S  *  I  D  K   : V  Y  *  *  D  G  R  T  C  N  E  G  V  I  G  Q  Q  T  Y  T  G  L  D  F  Q  *  A  S  *  T  L  K  N  N  W  I   : G  S  R  R  Q  N  E  R  V  T  A  C  H  V  R  R  F  C  E  A  F  P  N  K  H  G  G   : G  R  T  I  A  S  *  *  P  F  E  L  S  T  A  G  H  L  S  C  A  P  P  Q  K  L  T  S  M  V  V  V  *  V  F  W  S  D  R  H  R  K  L  P  S  S  E  C  *  G  L  E  T  M  S  F  F  T  S  T  L  T  K  T  F  A  N  Q  Q  K  G  C  L  V  D  S  K  V  G  L  Q  M  F  H  F  L  L  F  R  H  I  F  V  S  S  F  L  L  L  L  S  F  L  F  P  *  F  I  S  W  F  K  *  S  N  F  V  Q  E  R  P  M  R  I  E  N  V  K  F  G  Y  L  Y  K  L  M  L  S  I  Y  S :   *  K  E   </second_frame>
            <third_frame>   E  G  E  D  G  R  T  I  R  F  S  K  C  E  V  C  G  *  I  *  H  E  G  S  *  E  Q  P  S  Q  R  C  C  *  E  D  K  R  N  S  R  N  Q  G  I  V  D  L  E  K  M  V  E  I  S  P  E  T  S  L  Y  L  F  S  S  K  T  *  Y  F  *   : G  G  C  Y  S  L  H  R  G  S  E  E  S  V  C  H  N  E  R  R  I  P  S  *  I  Y   : C  *  Y  S  T  R  S  F  L  I  *  D  D  I  K  F  W  S  *  S  R  S  T  S  E  A  A  D  S  L  L  F  Q  S  S  F  C  F  I  A  W  N  T  D  F  V  V  Y  K  R  I  Y  D  A  S  E  H  H  D  K  S  P  P  L  *  E  I  *  T  T  L  R  Y  G  L  C  *  K  F  Y  F   : V  G  E  V  G  E  T  K  S  M  Y  K  E  I  V  L  G  G  D  V  W  D  L  L  D  E  L  M  I  Y  M  G  N  P  M  Q  Y  Y  E  K  D  V  K  F  V  R  :  G  V  L  L  S  G  P  P  G  T  G  K  T  L  F  A  R  T  L  A  K  E  S  G  M  P  F  V  F  A  S  G  A  E  F  T  D  S  E  K  S  G  A  A  R  I  N  E  M  F  S  V  A  R  R  N  :  A  P  A  F  V  F  I  D  E  I  D  A  I  A  G  R  H  A  R  K  D  P  R  R  K  A  T  F  E  A  L  I  S  Q  L  D  G  E :   K  E  K  T  G  V  D  R  F  S  L  R  Q  A  V  I  F  I  C  A  T  N  R  P  D  E  L  D  L  E  F  V  R  P  G  R  I  D  R  R  V  Y  I  G  L  P  D  A  K  Q  R  V  Q  I  F  G  V  H  S  A  G  K  Q  L  S  E  D  I  A  F  E  K  :  L  V  F  R  T  V  G  Y  S  G  A  D  I  R  N  L  V  N  E  A  G  I  M  S  :  V  R  K  G  H  S  K  I  N  Q  Q  D  I  V  D  V  L  D  K  Q  L  L  E  G  M  G  V  L  L  T  E  E  E  Q  Q  K  C  E  Q  S  :  V  S  R  E  K  R  Q  L  L  A  V  H  E  A  G  H  I  V  L  A  H  L  F  P  Q  F  D  W  H  A  F  S  Q  L  L  P  G  G  K  :  E  T  A  V  S  V  F  Y  P  R  E  D  V  V  D  Q  G  Y  T  T  F  G  Y  M  K  M  Q  M  V  V  A  H  G  G  R  C  A  E  R  I  V  F  G  D  D  I  T  D  G  G  V  D  D  L  E  K  I  T  K  :  I  A  R  E  M  V  I  S  P  R  N  S  R  L  G  L  T  S  L  T  K  K  I  G  L  G  D  R  P  D  N  P  D  G  E  I  I  K  Y  K  :  W  D  D  P  H  I  V  P  A  D  M  T  V  E  V  A  E  L  F  T  R  E  L  T  R  :  Y  I  D  E  T  E  E  L  A  M  R  G  L  L  A  N  R  H  I  L  D  L  I  S  N  E  L  L  E  H  S  R  I  T  G  L  :  E  V  E  D  K  M  R  G  L  Q  P  A  M  F  E  D  F  V  K  P  F  Q  I  N  M  E  E  :  E  G  P  L  P  H  N  D  R  L  S  Y  Q  P  L  D  I  Y  P  A  P  L  H  R  S  *  H  Q  W  W  L  F  E  F  S  G  Q  T  D  I  G  S  C  L  V  V  N  V  E  V  *  R  Q  C  P  F  S  H  Q  L  *  P  K  P  L  Q  T  N  R  K  A  A  *  *  I  V  R  L  G  C  K  C  S  I  F  Y  Y  L  G  T  F  L  F  L  L  S  F  F  C  S  L  F  F  S  L  N  L  F  H  G  L  N  R  A  T  L  Y  K  K  D  Q  *  E  S  K  M  *  N  L  A  I  Y  I  S  *  C  *  V  Y  I   : R  K  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24837" stop="24849"/>
                    <exon start="24947" stop="25083"/>
                    <exon start="25168" stop="25335"/>
                    <exon start="26552" stop="26664"/>
                    <exon start="27327" stop="27543"/>
                    <exon start="28898" stop="28969"/>
                    <exon start="29983" stop="30102"/>
                    <exon start="30185" stop="30301"/>
                    <exon start="30396" stop="30572"/>
                    <exon start="31312" stop="31431"/>
                    <exon start="31540" stop="31614"/>
                    <exon start="32292" stop="32399"/>
                    <exon start="35981" stop="36061"/>
                    <exon start="36413" stop="36490"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1593</number_coding_nucleotides>
                  <number_encoded_amino_acids>531</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KFYFVGEVGETKSMYKEIVLGGDVWDLLDELMIYMGNPMQYYEKDVKFVRGVLLSGPPGTGKTLFARTLAKESGMPFVFASGAEFTDSEKSGAARINEMFSVARRNAPAFVFIDEIDAIAGRHARKDPRRKATFEALISQLDGEKEKTGVDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRVYIGLPDAKQRVQIFGVHSAGKQLSEDIAFEKLVFRTVGYSGADIRNLVNEAGIMSVRKGHSKINQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSREKRQLLAVHEAGHIVLAHLFPQFDWHAFSQLLPGGKETAVSVFYPREDVVDQGYTTFGYMKMQMVVAHGGRCAERIVFGDDITDGGVDDLEKITKIAREMVISPRNSRLGLTSLTKKIGLGDRPDNPDGEIIKYKWDDPHIVPADMTVEVAELFTRELTRYIDETEELAMRGLLANRHILDLISNELLEHSRITGLEVEDKMRGLQPAMFEDFVKPFQINMEEEGPLPHNDRLSYQPLDIYPAPLHRS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="24785" e_stop="24849"/>
            <exon e_start="24943" e_stop="25083"/>
            <exon e_start="25168" e_stop="25335"/>
            <exon e_start="26552" e_stop="26664"/>
            <exon e_start="27327" e_stop="27543"/>
            <exon e_start="28898" e_stop="28969"/>
            <exon e_start="29983" e_stop="30102"/>
            <exon e_start="30185" e_stop="30301"/>
            <exon e_start="30396" e_stop="30572"/>
            <exon e_start="31312" e_stop="31431"/>
            <exon e_start="31540" e_stop="31614"/>
            <exon e_start="32292" e_stop="32399"/>
            <exon e_start="35981" e_stop="36061"/>
            <exon e_start="36413" e_stop="36823"/>
            <exon e_start="36918" e_stop="36931"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.928" acc_prob="0.936" e_score="1.000"/>
          <exon-intron don_prob="0.963" acc_prob="0.999" e_score="0.993"/>
          <exon-intron don_prob="0.991" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.880" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.946" e_score="0.991"/>
          <exon-intron don_prob="0.984" acc_prob="0.164" e_score="1.000"/>
          <exon-intron don_prob="0.918" acc_prob="0.998" e_score="0.992"/>
          <exon-intron don_prob="0.972" acc_prob="0.965" e_score="0.966"/>
          <exon-intron don_prob="0.966" acc_prob="0.998" e_score="0.994"/>
          <exon-intron don_prob="1.000" acc_prob="0.992" e_score="0.975"/>
          <exon-intron don_prob="0.981" acc_prob="0.999" e_score="0.987"/>
          <exon-intron don_prob="0.989" acc_prob="0.998" e_score="0.972"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.970" e_score="1.000"/>
          <exon-only e_score="0.929"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24785" e_stop="24849" e_length="65"/>
          </exon>
          <intron i_serial="1" don_prob="0.928" acc_prob="0.936">
            <gDNA_intron_boundary i_start="24850" i_stop="24942" i_length="93"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="24943" e_stop="25083" e_length="141"/>
          </exon>
          <intron i_serial="2" don_prob="0.963" acc_prob="0.999">
            <gDNA_intron_boundary i_start="25084" i_stop="25167" i_length="84"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="25168" e_stop="25335" e_length="168"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.993">
            <gDNA_intron_boundary i_start="25336" i_stop="26551" i_length="1216"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="26552" e_stop="26664" e_length="113"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.880">
            <gDNA_intron_boundary i_start="26665" i_stop="27326" i_length="662"/>
          </intron>
          <exon e_serial="5" e_score="0.991">
            <gDNA_exon_boundary e_start="27327" e_stop="27543" e_length="217"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.946">
            <gDNA_intron_boundary i_start="27544" i_stop="28897" i_length="1354"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="28898" e_stop="28969" e_length="72"/>
          </exon>
          <intron i_serial="6" don_prob="0.984" acc_prob="0.164">
            <gDNA_intron_boundary i_start="28970" i_stop="29982" i_length="1013"/>
          </intron>
          <exon e_serial="7" e_score="0.992">
            <gDNA_exon_boundary e_start="29983" e_stop="30102" e_length="120"/>
          </exon>
          <intron i_serial="7" don_prob="0.918" acc_prob="0.998">
            <gDNA_intron_boundary i_start="30103" i_stop="30184" i_length="82"/>
          </intron>
          <exon e_serial="8" e_score="0.966">
            <gDNA_exon_boundary e_start="30185" e_stop="30301" e_length="117"/>
          </exon>
          <intron i_serial="8" don_prob="0.972" acc_prob="0.965">
            <gDNA_intron_boundary i_start="30302" i_stop="30395" i_length="94"/>
          </intron>
          <exon e_serial="9" e_score="0.994">
            <gDNA_exon_boundary e_start="30396" e_stop="30572" e_length="177"/>
          </exon>
          <intron i_serial="9" don_prob="0.966" acc_prob="0.998">
            <gDNA_intron_boundary i_start="30573" i_stop="31311" i_length="739"/>
          </intron>
          <exon e_serial="10" e_score="0.975">
            <gDNA_exon_boundary e_start="31312" e_stop="31431" e_length="120"/>
          </exon>
          <intron i_serial="10" don_prob="1.000" acc_prob="0.992">
            <gDNA_intron_boundary i_start="31432" i_stop="31539" i_length="108"/>
          </intron>
          <exon e_serial="11" e_score="0.987">
            <gDNA_exon_boundary e_start="31540" e_stop="31614" e_length="75"/>
          </exon>
          <intron i_serial="11" don_prob="0.981" acc_prob="0.999">
            <gDNA_intron_boundary i_start="31615" i_stop="32291" i_length="677"/>
          </intron>
          <exon e_serial="12" e_score="0.972">
            <gDNA_exon_boundary e_start="32292" e_stop="32399" e_length="108"/>
          </exon>
          <intron i_serial="12" don_prob="0.989" acc_prob="0.998">
            <gDNA_intron_boundary i_start="32400" i_stop="35980" i_length="3581"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="35981" e_stop="36061" e_length="81"/>
          </exon>
          <intron i_serial="13" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="36062" i_stop="36412" i_length="351"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="36413" e_stop="36823" e_length="411"/>
          </exon>
          <intron i_serial="14" don_prob="0.000" acc_prob="0.970">
            <gDNA_intron_boundary i_start="36824" i_stop="36917" i_length="94"/>
          </intron>
          <exon e_serial="15" e_score="0.929">
            <gDNA_exon_boundary e_start="36918" e_stop="36931" e_length="14"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24785" stop="24849"/>
              <exon start="24943" stop="25083"/>
              <exon start="25168" stop="25335"/>
              <exon start="26552" stop="26664"/>
              <exon start="27327" stop="27538"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E452109" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25295" stop="25335"/>
              <exon start="26552" stop="26664"/>
              <exon start="27327" stop="27507"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26595" stop="26664"/>
              <exon start="27327" stop="27543"/>
              <exon start="28898" stop="28969"/>
              <exon start="29983" stop="30047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365904" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27370" stop="27543"/>
              <exon start="28898" stop="28969"/>
              <exon start="29983" stop="30102"/>
              <exon start="30185" stop="30301"/>
              <exon start="30396" stop="30572"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E464936" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30279" stop="30301"/>
              <exon start="30396" stop="30572"/>
              <exon start="31312" stop="31431"/>
              <exon start="31540" stop="31614"/>
              <exon start="32292" stop="32399"/>
              <exon start="35981" stop="36061"/>
              <exon start="36413" stop="36442"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E598608" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="31318" stop="31431"/>
              <exon start="31540" stop="31614"/>
              <exon start="32292" stop="32399"/>
              <exon start="35981" stop="36061"/>
              <exon start="36413" stop="36808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425617" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="32349" stop="32399"/>
              <exon start="35981" stop="36061"/>
              <exon start="36413" stop="36812"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E607539" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36005" stop="36061"/>
              <exon start="36413" stop="36823"/>
              <exon start="36918" stop="36931"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294407" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCGCCTCCTCTATAAGAAATATAAACAACTCTTCGATATGGCTTATGCTGAAAATTTTATTTTG : CCAGTTGGAGAAGTTGGTGAGACGAAATCGATGTATAAAGAAATAGTATTGGGAGGAGATGTTTGGGATCTTTTGGATGAATTGATGATTTATATGGGAAATCCAATGCAATATTATGAGAAAGATGTCAAATTTGTGCGG : GGTGTGCTTCTGTCTGGCCCCCCTGGAACAGGTAAAACACTGTTTGCTCGGACACTTGCAAAGGAAAGTGGGATGCCTTTTGTATTTGCTTCTGGTGCAGAGTTTACTGATAGTGAAAAGAGTGGTGCTGCACGAATCAATGAAATGTTTTCTGTTGCTAGGAGAAAT : GCTCCAGCTTTTGTATTTATAGATGAGATTGATGCTATTGCTGGAAGGCATGCAAGAAAGGATCCACGCAGGAAGGCAACATTTGAGGCTCTGATTTCTCAGCTTGACGGGGA : GAAAGAAAAAACTGGTGTTGATAGGTTTTCACTAAGACAAGCTGTCATATTCATTTGTGCAACCAATCGGCCAGATGAACTGGACTTAGAATTTGTCCGCCCTGGACGTATTGACAGACGTGTGTATATTGGTTTACCAGATGCAAAGCAACGAGTGCAAATTTTTGGAGTTCACAGTGCTGGGAAACAGCTTTCCGAGGATATTGCCTTTGAGAAA : CTTGTCTTTCGTACAGTTGGATATTCTGGGGCAGACATAAGAAATCTAGTCAATGAAGCTGGAATAATGTCT : GTAAGAAAAGGACATTCTAAGATCAACCAGCAGGATATCGTCGATGTTTTGGACAAGCAATTGCTTGAGGGTATGGGTGTTCTACTGACAGAGGAAGAGCAGCAGAAGTGTGAGCAAAGT : GTATCTCGCGAAAAAAGACAACTGTTGGCAGTACATGAAGCTGGTCACATTGTGTTGGCGCACTTGTTCCCTCAGTTTGATTGGCATGCTTTTTCTCAGCTTCTACCTGGGGGCAAG : GAAACTGCTGTATCAGTTTTCTACCCTAGAGAAGATGTGGTTGATCAAGGTTATACAACCTTTGGCTACATGAAAATGCAAATGGTAGTAGCTCATGGCGGGCGCTGTGCCGAACGTATTGTATTTGGTGATGACATTACTGATGGAGGAGTAGATGATCTAGAAAAGATTACCAAG : ATTGCTCGGGAAATGGTGATAAGTCCTAGAAACTCTAGGTTGGGCCTCACTTCTTTGACAAAAAAAATAGGATTGGGTGATCGACCTGACAATCCTGATGGTGAGATTATAAAATATAAG : TGGGATGATCCTCATATAGTTCCTGCTGATATGACAGTTGAAGTTGCTGAGCTATTTACTCGTGAATTGACAAGG : TATATTGATGAGACGGAAGAACTTGCAATGAGGGGGTTATTGGCCAACAGACATATACTGGACTTGATTTCCAATGAGCTTCTTGAACACTCAAGAATAACTGGATTG : GAAGTAGAAGACAAAATGAGAGGGTTACAGCCTGCCATGTTCGAAGATTTTGTGAAGCCTTTCCAAATAAACATGGAGGAG : GAAGGACCATTGCCTCATAATGACCGTTTGAGTTATCAACCGCTGGACATTTATCCTGCGCCCCTCCACAGAAGTTAACATCAATGGTGGTTGTTTGAGTTTTCTGGTCAGACCGACATCGGAAGTTGCCTAGTAGTGAATGTTGAGGTTTAGAGACAATGTCCTTTTTCACATCAACTCTGACCAAAACCTTTGCAAACCAACAGAAAGGCTGCTTAGTAGATAGTAAGGTTGGGTTGCAAATGTTCCATTTTTTATTATTTAGGCACATTTTTGTTTCTTCTTTCCTTCTTTTGCTCTCTTTTCTTTTCCCTTAATTTATTTCATGGTTTAAATAGAGCAACTTTGTACAAGAAAGACCAATGAGAATCGAAAATGTAAAATTTGGCTATTTATATAAGTTAATGTTAA : GTAAAAAGAAAAAA</gDNA_template>
            <first_frame> I  A  S  S  I  R  N  I  N  N  S  S  I  W  L  M  L  K  I  L  F  C :   Q  L  E  K  L  V  R  R  N  R  C  I  K  K  *  Y  W  E  E  M  F  G  I  F  W  M  N  *  *  F  I  W  E  I  Q  C  N  I  M  R  K  M  S  N  L  C  G :   V  C  F  C  L  A  P  L  E  Q  V  K  H  C  L  L  G  H  L  Q  R  K  V  G  C  L  L  Y  L  L  L  V  Q  S  L  L  I  V  K  R  V  V  L  H  E  S  M  K  C  F  L  L  L  G  E  M :   L  Q  L  L  Y  L  *  M  R  L  M  L  L  L  E  G  M  Q  E  R  I  H  A  G  R  Q  H  L  R  L  *  F  L  S  L  T  G   : R  K  K  K  L  V  L  I  G  F  H  *  D  K  L  S  Y  S  F  V  Q  P  I  G  Q  M  N  W  T  *  N  L  S  A  L  D  V  L  T  D  V  C  I  L  V  Y  Q  M  Q  S  N  E  C  K  F  L  E  F  T  V  L  G  N  S  F  P  R  I  L  P  L  R  N :   L  S  F  V  Q  L  D  I  L  G  Q  T  *  E  I  *  S  M  K  L  E  *  C  L :   *  E  K  D  I  L  R  S  T  S  R  I  S  S  M  F  W  T  S  N  C  L  R  V  W  V  F  Y  *  Q  R  K  S  S  R  S  V  S  K  V :   Y  L  A  K  K  D  N  C  W  Q  Y  M  K  L  V  T  L  C  W  R  T  C  S  L  S  L  I  G  M  L  F  L  S  F  Y  L  G  A  R :   K  L  L  Y  Q  F  S  T  L  E  K  M  W  L  I  K  V  I  Q  P  L  A  T  *  K  C  K  W  *  *  L  M  A  G  A  V  P  N  V  L  Y  L  V  M  T  L  L  M  E  E  *  M  I  *  K  R  L  P  R :   L  L  G  K  W  *  *  V  L  E  T  L  G  W  A  S  L  L  *  Q  K  K  *  D  W  V  I  D  L  T  I  L  M  V  R  L  *  N  I  S :   G  M  I  L  I  *  F  L  L  I  *  Q  L  K  L  L  S  Y  L  L  V  N  *  Q  G :   I  L  M  R  R  K  N  L  Q  *  G  G  Y  W  P  T  D  I  Y  W  T  *  F  P  M  S  F  L  N  T  Q  E  *  L  D  W :   K  *  K  T  K  *  E  G  Y  S  L  P  C  S  K  I  L  *  S  L  S  K  *  T  W  R  R :   K  D  H  C  L  I  M  T  V  *  V  I  N  R  W  T  F  I  L  R  P  S  T  E  V  N  I  N  G  G  C  L  S  F  L  V  R  P  T  S  E  V  A  *  *  *  M  L  R  F  R  D  N  V  L  F  H  I  N  S  D  Q  N  L  C  K  P  T  E  R  L  L  S  R  *  *  G  W  V  A  N  V  P  F  F  I  I  *  A  H  F  C  F  F  F  P  S  F  A  L  F  S  F  P  L  I  Y  F  M  V  *  I  E  Q  L  C  T  R  K  T  N  E  N  R  K  C  K  I  W  L  F  I  *  V  N  V  K :   *  K  E  K  </first_frame>
            <second_frame>  S  P  P  L  *  E  I  *  T  T  L  R  Y  G  L  C  *  K  F  Y  F   : A  S  W  R  S  W  *  D  E  I  D  V  *  R  N  S  I  G  R  R  C  L  G  S  F  G  *  I  D  D  L  Y  G  K  S  N  A  I  L  *  E  R  C  Q  I  C  A   : G  C  A  S  V  W  P  P  W  N  R  *  N  T  V  C  S  D  T  C  K  G  K  W  D  A  F  C  I  C  F  W  C  R  V  Y  *  *  *  K  E  W  C  C  T  N  Q  *  N  V  F  C  C  *  E  K   : C  S  S  F  C  I  Y  R  *  D  *  C  Y  C  W  K  A  C  K  K  G  S  T  Q  E  G  N  I  *  G  S  D  F  S  A  *  R  G  :  E  R  K  N  W  C  *  *  V  F  T  K  T  S  C  H  I  H  L  C  N  Q  S  A  R  *  T  G  L  R  I  C  P  P  W  T  Y  *  Q  T  C  V  Y  W  F  T  R  C  K  A  T  S  A  N  F  W  S  S  Q  C  W  E  T  A  F  R  G  Y  C  L  *  E   : T  C  L  S  Y  S  W  I  F  W  G  R  H  K  K  S  S  Q  *  S  W  N  N  V   : C  K  K  R  T  F  *  D  Q  P  A  G  Y  R  R  C  F  G  Q  A  I  A  *  G  Y  G  C  S  T  D  R  G  R  A  A  E  V  *  A  K   : C  I  S  R  K  K  T  T  V  G  S  T  *  S  W  S  H  C  V  G  A  L  V  P  S  V  *  L  A  C  F  F  S  A  S  T  W  G  Q   : G  N  C  C  I  S  F  L  P  *  R  R  C  G  *  S  R  L  Y  N  L  W  L  H  E  N  A  N  G  S  S  S  W  R  A  L  C  R  T  Y  C  I  W  *  *  H  Y  *  W  R  S  R  *  S  R  K  D  Y  Q   : D  C  S  G  N  G  D  K  S  *  K  L  *  V  G  P  H  F  F  D  K  K  N  R  I  G  *  S  T  *  Q  S  *  W  *  D  Y  K  I  *   : V  G  *  S  S  Y  S  S  C  *  Y  D  S  *  S  C  *  A  I  Y  S  *  I  D  K   : V  Y  *  *  D  G  R  T  C  N  E  G  V  I  G  Q  Q  T  Y  T  G  L  D  F  Q  *  A  S  *  T  L  K  N  N  W  I   : G  S  R  R  Q  N  E  R  V  T  A  C  H  V  R  R  F  C  E  A  F  P  N  K  H  G  G   : G  R  T  I  A  S  *  *  P  F  E  L  S  T  A  G  H  L  S  C  A  P  P  Q  K  L  T  S  M  V  V  V  *  V  F  W  S  D  R  H  R  K  L  P  S  S  E  C  *  G  L  E  T  M  S  F  F  T  S  T  L  T  K  T  F  A  N  Q  Q  K  G  C  L  V  D  S  K  V  G  L  Q  M  F  H  F  L  L  F  R  H  I  F  V  S  S  F  L  L  L  L  S  F  L  F  P  *  F  I  S  W  F  K  *  S  N  F  V  Q  E  R  P  M  R  I  E  N  V  K  F  G  Y  L  Y  K  L  M  L   : S  K  K  K  K </second_frame>
            <third_frame>   R  L  L  Y  K  K  Y  K  Q  L  F  D  M  A  Y  A  E  N  F  I  L  :  P  V  G  E  V  G  E  T  K  S  M  Y  K  E  I  V  L  G  G  D  V  W  D  L  L  D  E  L  M  I  Y  M  G  N  P  M  Q  Y  Y  E  K  D  V  K  F  V  R  :  G  V  L  L  S  G  P  P  G  T  G  K  T  L  F  A  R  T  L  A  K  E  S  G  M  P  F  V  F  A  S  G  A  E  F  T  D  S  E  K  S  G  A  A  R  I  N  E  M  F  S  V  A  R  R  N  :  A  P  A  F  V  F  I  D  E  I  D  A  I  A  G  R  H  A  R  K  D  P  R  R  K  A  T  F  E  A  L  I  S  Q  L  D  G  E :   K  E  K  T  G  V  D  R  F  S  L  R  Q  A  V  I  F  I  C  A  T  N  R  P  D  E  L  D  L  E  F  V  R  P  G  R  I  D  R  R  V  Y  I  G  L  P  D  A  K  Q  R  V  Q  I  F  G  V  H  S  A  G  K  Q  L  S  E  D  I  A  F  E  K  :  L  V  F  R  T  V  G  Y  S  G  A  D  I  R  N  L  V  N  E  A  G  I  M  S  :  V  R  K  G  H  S  K  I  N  Q  Q  D  I  V  D  V  L  D  K  Q  L  L  E  G  M  G  V  L  L  T  E  E  E  Q  Q  K  C  E  Q  S  :  V  S  R  E  K  R  Q  L  L  A  V  H  E  A  G  H  I  V  L  A  H  L  F  P  Q  F  D  W  H  A  F  S  Q  L  L  P  G  G  K  :  E  T  A  V  S  V  F  Y  P  R  E  D  V  V  D  Q  G  Y  T  T  F  G  Y  M  K  M  Q  M  V  V  A  H  G  G  R  C  A  E  R  I  V  F  G  D  D  I  T  D  G  G  V  D  D  L  E  K  I  T  K  :  I  A  R  E  M  V  I  S  P  R  N  S  R  L  G  L  T  S  L  T  K  K  I  G  L  G  D  R  P  D  N  P  D  G  E  I  I  K  Y  K  :  W  D  D  P  H  I  V  P  A  D  M  T  V  E  V  A  E  L  F  T  R  E  L  T  R  :  Y  I  D  E  T  E  E  L  A  M  R  G  L  L  A  N  R  H  I  L  D  L  I  S  N  E  L  L  E  H  S  R  I  T  G  L  :  E  V  E  D  K  M  R  G  L  Q  P  A  M  F  E  D  F  V  K  P  F  Q  I  N  M  E  E  :  E  G  P  L  P  H  N  D  R  L  S  Y  Q  P  L  D  I  Y  P  A  P  L  H  R  S  *  H  Q  W  W  L  F  E  F  S  G  Q  T  D  I  G  S  C  L  V  V  N  V  E  V  *  R  Q  C  P  F  S  H  Q  L  *  P  K  P  L  Q  T  N  R  K  A  A  *  *  I  V  R  L  G  C  K  C  S  I  F  Y  Y  L  G  T  F  L  F  L  L  S  F  F  C  S  L  F  F  S  L  N  L  F  H  G  L  N  R  A  T  L  Y  K  K  D  Q  *  E  S  K  M  *  N  L  A  I  Y  I  S  *  C  *  :  V  K  R  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24787" stop="24849"/>
                    <exon start="24943" stop="25083"/>
                    <exon start="25168" stop="25335"/>
                    <exon start="26552" stop="26664"/>
                    <exon start="27327" stop="27543"/>
                    <exon start="28898" stop="28969"/>
                    <exon start="29983" stop="30102"/>
                    <exon start="30185" stop="30301"/>
                    <exon start="30396" stop="30572"/>
                    <exon start="31312" stop="31431"/>
                    <exon start="31540" stop="31614"/>
                    <exon start="32292" stop="32399"/>
                    <exon start="35981" stop="36061"/>
                    <exon start="36413" stop="36490"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1647</number_coding_nucleotides>
                  <number_encoded_amino_acids>549</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RLLYKKYKQLFDMAYAENFILPVGEVGETKSMYKEIVLGGDVWDLLDELMIYMGNPMQYYEKDVKFVRGVLLSGPPGTGKTLFARTLAKESGMPFVFASGAEFTDSEKSGAARINEMFSVARRNAPAFVFIDEIDAIAGRHARKDPRRKATFEALISQLDGEKEKTGVDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRVYIGLPDAKQRVQIFGVHSAGKQLSEDIAFEKLVFRTVGYSGADIRNLVNEAGIMSVRKGHSKINQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSREKRQLLAVHEAGHIVLAHLFPQFDWHAFSQLLPGGKETAVSVFYPREDVVDQGYTTFGYMKMQMVVAHGGRCAERIVFGDDITDGGVDDLEKITKIAREMVISPRNSRLGLTSLTKKIGLGDRPDNPDGEIIKYKWDDPHIVPADMTVEVAELFTRELTRYIDETEELAMRGLLANRHILDLISNELLEHSRITGLEVEDKMRGLQPAMFEDFVKPFQINMEEEGPLPHNDRLSYQPLDIYPAPLHRS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="47868" PGL_stop="48688"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47868" e_stop="48490"/>
            <exon e_start="48644" e_stop="48688"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="0.933"/>
          <exon-only e_score="0.978"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.933">
            <gDNA_exon_boundary e_start="47868" e_stop="48490" e_length="623"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="48491" i_stop="48643" i_length="153"/>
          </intron>
          <exon e_serial="2" e_score="0.978">
            <gDNA_exon_boundary e_start="48644" e_stop="48688" e_length="45"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47868" stop="48490"/>
              <exon start="48644" stop="48688"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E485600" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47868" stop="48358"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E427227" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTATCGGAGAAAATGGCGAACAGTTTAATTCTATCCATTAAGGTTGTGCTAATATCAATTGGTGCAATTTCCTTAGCGATGGTAGCGAAAGCGTCGATTCCATTAATTTATCATGAGCTACCAGCAATTTGGAGTGTACTTATAGCTTGGCTTAAGCCTCCGTATCTCTACTTTGTTATCAATGCTATAATCCTCATAATTTTCGCCACTTCTCGCTCGTCCAACCATAAGGAGTACTCCAGCTCCGACGAACAATTACAACCGCTGATTACCGCTAGAACACCTCCGCAGTCAGATTTGATAGCGATTACTCAATCGGAGCTTCATTCAGTCCAAAGTGAAGTGAAGGTGTTTGAGGTGAAGCCTGTAGTGGTGGATGAACCGCAGGTGTTTGAGGTTAAGCCAGTACTGGTGAACGGCTCCGTCGTGGTTATGAATCATGAAGATGAAGATCACGATGATCCCGATGAAAGCGAAGCGATCGTGATTCCGAAATCAGTTGTTTCTCCGTTGCCGGAAATTGAATCTAAAAATGAGCTGCTTCTAATACCGGCGACGGAGAAACCTCTGGTTTCTTCCAGATTCGGTAACAGAAAACCTGCTGTGAAAATGAGTCCGGAAG : GGGTGAAGTCACTGAAAGTGTCCCGGTCGAAAAAGCCAGAGACAT</gDNA_template>
            <first_frame> V  I  G  E  N  G  E  Q  F  N  S  I  H  *  G  C  A  N  I  N  W  C  N  F  L  S  D  G  S  E  S  V  D  S  I  N  L  S  *  A  T  S  N  L  E  C  T  Y  S  L  A  *  A  S  V  S  L  L  C  Y  Q  C  Y  N  P  H  N  F  R  H  F  S  L  V  Q  P  *  G  V  L  Q  L  R  R  T  I  T  T  A  D  Y  R  *  N  T  S  A  V  R  F  D  S  D  Y  S  I  G  A  S  F  S  P  K  *  S  E  G  V  *  G  E  A  C  S  G  G  *  T  A  G  V  *  G  *  A  S  T  G  E  R  L  R  R  G  Y  E  S  *  R  *  R  S  R  *  S  R  *  K  R  S  D  R  D  S  E  I  S  C  F  S  V  A  G  N  *  I  *  K  *  A  A  S  N  T  G  D  G  E  T  S  G  F  F  Q  I  R  *  Q  K  T  C  C  E  N  E  S  G  R :   G  E  V  T  E  S  V  P  V  E  K  A  R  D   </first_frame>
            <second_frame>  L  S  E  K  M  A  N  S  L  I  L  S  I  K  V  V  L  I  S  I  G  A  I  S  L  A  M  V  A  K  A  S  I  P  L  I  Y  H  E  L  P  A  I  W  S  V  L  I  A  W  L  K  P  P  Y  L  Y  F  V  I  N  A  I  I  L  I  I  F  A  T  S  R  S  S  N  H  K  E  Y  S  S  S  D  E  Q  L  Q  P  L  I  T  A  R  T  P  P  Q  S  D  L  I  A  I  T  Q  S  E  L  H  S  V  Q  S  E  V  K  V  F  E  V  K  P  V  V  V  D  E  P  Q  V  F  E  V  K  P  V  L  V  N  G  S  V  V  V  M  N  H  E  D  E  D  H  D  D  P  D  E  S  E  A  I  V  I  P  K  S  V  V  S  P  L  P  E  I  E  S  K  N  E  L  L  L  I  P  A  T  E  K  P  L  V  S  S  R  F  G  N  R  K  P  A  V  K  M  S  P  E   : G  V  K  S  L  K  V  S  R  S  K  K  P  E  T  </second_frame>
            <third_frame>   Y  R  R  K  W  R  T  V  *  F  Y  P  L  R  L  C  *  Y  Q  L  V  Q  F  P  *  R  W  *  R  K  R  R  F  H  *  F  I  M  S  Y  Q  Q  F  G  V  Y  L  *  L  G  L  S  L  R  I  S  T  L  L  S  M  L  *  S  S  *  F  S  P  L  L  A  R  P  T  I  R  S  T  P  A  P  T  N  N  Y  N  R  *  L  P  L  E  H  L  R  S  Q  I  *  *  R  L  L  N  R  S  F  I  Q  S  K  V  K  *  R  C  L  R  *  S  L  *  W  W  M  N  R  R  C  L  R  L  S  Q  Y  W  *  T  A  P  S  W  L  *  I  M  K  M  K  I  T  M  I  P  M  K  A  K  R  S  *  F  R  N  Q  L  F  L  R  C  R  K  L  N  L  K  M  S  C  F  *  Y  R  R  R  R  N  L  W  F  L  P  D  S  V  T  E  N  L  L  *  K  *  V  R  K  :  G  *  S  H  *  K  C  P  G  R  K  S  Q  R  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47869" stop="48490"/>
                    <exon start="48644" stop="48687"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>666</number_coding_nucleotides>
                  <number_encoded_amino_acids>222</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSEKMANSLILSIKVVLISIGAISLAMVAKASIPLIYHELPAIWSVLIAWLKPPYLYFVINAIILIIFATSRSSNHKEYSSSDEQLQPLITARTPPQSDLIAITQSELHSVQSEVKVFEVKPVVVDEPQVFEVKPVLVNGSVVVMNHEDEDHDDPDESEAIVIPKSVVSPLPEIESKNELLLIPATEKPLVSSRFGNRKPAVKMSPEGVKSLKVSRSKKPET</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="53024" PGL_stop="50632"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="53024" e_stop="52955"/>
            <exon e_start="52086" e_stop="52016"/>
            <exon e_start="51888" e_stop="50632"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.944" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.918" acc_prob="0.942" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="53024" e_stop="52955" e_length="70"/>
          </exon>
          <intron i_serial="1" don_prob="0.944" acc_prob="0.997">
            <gDNA_intron_boundary i_start="52954" i_stop="52087" i_length="868"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="52086" e_stop="52016" e_length="71"/>
          </exon>
          <intron i_serial="2" don_prob="0.918" acc_prob="0.942">
            <gDNA_intron_boundary i_start="52015" i_stop="51889" i_length="127"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="51888" e_stop="50632" e_length="1257"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53024" stop="52955"/>
              <exon start="52086" stop="52016"/>
              <exon start="51888" stop="51397"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314839" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51807" stop="51102"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698551" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51502" stop="50632"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E555621" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51502" stop="50642"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553095" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAAAGTTCCTGACAATGTTGACCTTCCATCGAGATGGACTTGTTCAGACAACTCATGCGACCCCGAGAG : GTCTGTGTGCTCAGCAGTTCAAGAATTAACAGCAGATCATCTGAGGGACCTACTACCTCATATTAATAAAG : CTTCCAAGAAAAGGAAGGCTTCTAAACAGGAAATGGACTTGGTTGAAACTCTGGATGGGCTTGATGCCCTTGCTCATCTAGCTATCCTAGAAGAGGGAGAGACCCTTCCAGCATCACCACAGGCCACAACTAAGCATCCACGTCATAGACCTGGGTGTACATGCATTGTCTGCATCCAGCCCCCTAGTGGAAAAGGTCCTAAGCACAAGCAATCATGTGATTGTAACGTCTGTAAATCAGTAAAGCGTCGTTTCAAAACATTGATGATGAAGCGTGAAAAAAAGTTATCAGAGAAAGAAGCAGAAGCTACTTGTCAAAAGCTGCAGCCGCAATCAGCTGGGCAATTGCTTGATGCTGATGACATTCAAGAACCTATTGATGATGCAGTGCATTCAAGCCCTCAGCATGAAGAGCTGAACATTGAAGGTTCTGTTGATCCCAATTACCTTAATGAGAAGAAATCTTCTGTTGAGGATCCCAATTACCTTGATGAGAAGAAATCTTCAGTTGATGACACAAATTACCTTAGTGAGAAGATATCTTCTGTTGATGACCCCAGCTACCTTAATGAGAAGGAATCTTCTGTTGATGATCCCAACATCCTGAATGAGAAGAAATCTTCTGTTGATGATCCTAACTGCCTGAATGAGAAGAAATCTGCTGTTGATGATCCCAACTACGTGGATGAGAGGAAATCTTCTGTTGATGATCCCAATTGCCTTAAGGAGAAGAAATCTTCTGCTTCACCATTTAAAGGTGAATTTGACCTGAATGCTAAGCCAGATAGGGACGACGAGCTTTCACCAGGCTCTGATTCTGGTAGCATGATGCGCATGATCAAACGTGCTGCTGAGCAATATGTCAGGCACTGTGATAATGGAAGTTCCGTGGGTAACCAAAGAGATGGAGATGGTGCTGGGGAGACAAATCCGGGTAATTGTGTTATTGTTAGTGGTAGTCATCAAGCTGATGTAGATCATAATAGGCCTTTACCCATAAGCGCTGCTGCATCTTTGGCACCTAATGACCAGTAAGTTGCTCCCTACATGAGGCACCTAAATTAGCTGTGCTATATTAAAAACCAGAGGTACTCCGCAGTGTATGGAAATTTGTACATTTTGGCTTTGCTGGCGTCATGCATTGTACATAGATAGACGTAGCAAGTAGCAACTGATGTAATCTTTCTGCAATCCACAGGTTGCATTTTGCAATGGCCGCGAGGTGCCTTACATATTTATTATATAAATGGCTGGAAAG</gDNA_template>
            <first_frame> E  K  F  L  T  M  L  T  F  H  R  D  G  L  V  Q  T  T  H  A  T  P  R   : G  L  C  A  Q  Q  F  K  N  *  Q  Q  I  I  *  G  T  Y  Y  L  I  L  I  K  :  L  P  R  K  G  R  L  L  N  R  K  W  T  W  L  K  L  W  M  G  L  M  P  L  L  I  *  L  S  *  K  R  E  R  P  F  Q  H  H  H  R  P  Q  L  S  I  H  V  I  D  L  G  V  H  A  L  S  A  S  S  P  L  V  E  K  V  L  S  T  S  N  H  V  I  V  T  S  V  N  Q  *  S  V  V  S  K  H  *  *  *  S  V  K  K  S  Y  Q  R  K  K  Q  K  L  L  V  K  S  C  S  R  N  Q  L  G  N  C  L  M  L  M  T  F  K  N  L  L  M  M  Q  C  I  Q  A  L  S  M  K  S  *  T  L  K  V  L  L  I  P  I  T  L  M  R  R  N  L  L  L  R  I  P  I  T  L  M  R  R  N  L  Q  L  M  T  Q  I  T  L  V  R  R  Y  L  L  L  M  T  P  A  T  L  M  R  R  N  L  L  L  M  I  P  T  S  *  M  R  R  N  L  L  L  M  I  L  T  A  *  M  R  R  N  L  L  L  M  I  P  T  T  W  M  R  G  N  L  L  L  M  I  P  I  A  L  R  R  R  N  L  L  L  H  H  L  K  V  N  L  T  *  M  L  S  Q  I  G  T  T  S  F  H  Q  A  L  I  L  V  A  *  C  A  *  S  N  V  L  L  S  N  M  S  G  T  V  I  M  E  V  P  W  V  T  K  E  M  E  M  V  L  G  R  Q  I  R  V  I  V  L  L  L  V  V  V  I  K  L  M  *  I  I  I  G  L  Y  P  *  A  L  L  H  L  W  H  L  M  T  S  K  L  L  P  T  *  G  T  *  I  S  C  A  I  L  K  T  R  G  T  P  Q  C  M  E  I  C  T  F  W  L  C  W  R  H  A  L  Y  I  D  R  R  S  K  *  Q  L  M  *  S  F  C  N  P  Q  V  A  F  C  N  G  R  E  V  P  Y  I  F  I  I  *  M  A  G  K </first_frame>
            <second_frame>  K  S  S  *  Q  C  *  P  S  I  E  M  D  L  F  R  Q  L  M  R  P  R  E  :  V  C  V  L  S  S  S  R  I  N  S  R  S  S  E  G  P  T  T  S  Y  *  *  S :   F  Q  E  K  E  G  F  *  T  G  N  G  L  G  *  N  S  G  W  A  *  C  P  C  S  S  S  Y  P  R  R  G  R  D  P  S  S  I  T  T  G  H  N  *  A  S  T  S  *  T  W  V  Y  M  H  C  L  H  P  A  P  *  W  K  R  S  *  A  Q  A  I  M  *  L  *  R  L  *  I  S  K  A  S  F  Q  N  I  D  D  E  A  *  K  K  V  I  R  E  R  S  R  S  Y  L  S  K  A  A  A  A  I  S  W  A  I  A  *  C  *  *  H  S  R  T  Y  *  *  C  S  A  F  K  P  S  A  *  R  A  E  H  *  R  F  C  *  S  Q  L  P  *  *  E  E  I  F  C  *  G  S  Q  L  P  *  *  E  E  I  F  S  *  *  H  K  L  P  *  *  E  D  I  F  C  *  *  P  Q  L  P  *  *  E  G  I  F  C  *  *  S  Q  H  P  E  *  E  E  I  F  C  *  *  S  *  L  P  E  *  E  E  I  C  C  *  *  S  Q  L  R  G  *  E  E  I  F  C  *  *  S  Q  L  P  *  G  E  E  I  F  C  F  T  I  *  R  *  I  *  P  E  C  *  A  R  *  G  R  R  A  F  T  R  L  *  F  W  *  H  D  A  H  D  Q  T  C  C  *  A  I  C  Q  A  L  *  *  W  K  F  R  G  *  P  K  R  W  R  W  C  W  G  D  K  S  G  *  L  C  Y  C  *  W  *  S  S  S  *  C  R  S  *  *  A  F  T  H  K  R  C  C  I  F  G  T  *  *  P  V  S  C  S  L  H  E  A  P  K  L  A  V  L  Y  *  K  P  E  V  L  R  S  V  W  K  F  V  H  F  G  F  A  G  V  M  H  C  T  *  I  D  V  A  S  S  N  *  C  N  L  S  A  I  H  R  L  H  F  A  M  A  A  R  C  L  T  Y  L  L  Y  K  W  L  E   </second_frame>
            <third_frame>   K  V  P  D  N  V  D  L  P  S  R  W  T  C  S  D  N  S  C  D  P  E  R :   S  V  C  S  A  V  Q  E  L  T  A  D  H  L  R  D  L  L  P  H  I  N  K   : A  S  K  K  R  K  A  S  K  Q  E  M  D  L  V  E  T  L  D  G  L  D  A  L  A  H  L  A  I  L  E  E  G  E  T  L  P  A  S  P  Q  A  T  T  K  H  P  R  H  R  P  G  C  T  C  I  V  C  I  Q  P  P  S  G  K  G  P  K  H  K  Q  S  C  D  C  N  V  C  K  S  V  K  R  R  F  K  T  L  M  M  K  R  E  K  K  L  S  E  K  E  A  E  A  T  C  Q  K  L  Q  P  Q  S  A  G  Q  L  L  D  A  D  D  I  Q  E  P  I  D  D  A  V  H  S  S  P  Q  H  E  E  L  N  I  E  G  S  V  D  P  N  Y  L  N  E  K  K  S  S  V  E  D  P  N  Y  L  D  E  K  K  S  S  V  D  D  T  N  Y  L  S  E  K  I  S  S  V  D  D  P  S  Y  L  N  E  K  E  S  S  V  D  D  P  N  I  L  N  E  K  K  S  S  V  D  D  P  N  C  L  N  E  K  K  S  A  V  D  D  P  N  Y  V  D  E  R  K  S  S  V  D  D  P  N  C  L  K  E  K  K  S  S  A  S  P  F  K  G  E  F  D  L  N  A  K  P  D  R  D  D  E  L  S  P  G  S  D  S  G  S  M  M  R  M  I  K  R  A  A  E  Q  Y  V  R  H  C  D  N  G  S  S  V  G  N  Q  R  D  G  D  G  A  G  E  T  N  P  G  N  C  V  I  V  S  G  S  H  Q  A  D  V  D  H  N  R  P  L  P  I  S  A  A  A  S  L  A  P  N  D  Q  *  V  A  P  Y  M  R  H  L  N  *  L  C  Y  I  K  N  Q  R  Y  S  A  V  Y  G  N  L  Y  I  L  A  L  L  A  S  C  I  V  H  R  *  T  *  Q  V  A  T  D  V  I  F  L  Q  S  T  G  C  I  L  Q  W  P  R  G  A  L  H  I  Y  Y  I  N  G  W  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53022" stop="52955"/>
                    <exon start="52086" stop="52016"/>
                    <exon start="51888" stop="50855"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1170</number_coding_nucleotides>
                  <number_encoded_amino_acids>390</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KVPDNVDLPSRWTCSDNSCDPERSVCSAVQELTADHLRDLLPHINKASKKRKASKQEMDLVETLDGLDALAHLAILEEGETLPASPQATTKHPRHRPGCTCIVCIQPPSGKGPKHKQSCDCNVCKSVKRRFKTLMMKREKKLSEKEAEATCQKLQPQSAGQLLDADDIQEPIDDAVHSSPQHEELNIEGSVDPNYLNEKKSSVEDPNYLDEKKSSVDDTNYLSEKISSVDDPSYLNEKESSVDDPNILNEKKSSVDDPNCLNEKKSAVDDPNYVDERKSSVDDPNCLKEKKSSASPFKGEFDLNAKPDRDDELSPGSDSGSMMRMIKRAAEQYVRHCDNGSSVGNQRDGDGAGETNPGNCVIVSGSHQADVDHNRPLPISAAASLAPNDQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="72065" PGL_stop="67703"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72065" e_stop="71642"/>
            <exon e_start="70617" e_stop="70495"/>
            <exon e_start="70398" e_stop="70298"/>
            <exon e_start="69436" e_stop="69364"/>
            <exon e_start="68937" e_stop="68851"/>
            <exon e_start="68737" e_stop="68660"/>
            <exon e_start="68529" e_stop="68459"/>
            <exon e_start="67934" e_stop="67703"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.958" e_score="0.939"/>
          <exon-intron don_prob="0.985" acc_prob="0.707" e_score="0.959"/>
          <exon-intron don_prob="0.999" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.810" acc_prob="0.849" e_score="1.000"/>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.939">
            <gDNA_exon_boundary e_start="72065" e_stop="71642" e_length="424"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.958">
            <gDNA_intron_boundary i_start="71641" i_stop="70618" i_length="1024"/>
          </intron>
          <exon e_serial="2" e_score="0.959">
            <gDNA_exon_boundary e_start="70617" e_stop="70495" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.985" acc_prob="0.707">
            <gDNA_intron_boundary i_start="70494" i_stop="70399" i_length="96"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="70398" e_stop="70298" e_length="101"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.989">
            <gDNA_intron_boundary i_start="70297" i_stop="69437" i_length="861"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="69436" e_stop="69364" e_length="73"/>
          </exon>
          <intron i_serial="4" don_prob="0.984" acc_prob="1.000">
            <gDNA_intron_boundary i_start="69363" i_stop="68938" i_length="426"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="68937" e_stop="68851" e_length="87"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="68850" i_stop="68738" i_length="113"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="68737" e_stop="68660" e_length="78"/>
          </exon>
          <intron i_serial="6" don_prob="0.972" acc_prob="0.992">
            <gDNA_intron_boundary i_start="68659" i_stop="68530" i_length="130"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="68529" e_stop="68459" e_length="71"/>
          </exon>
          <intron i_serial="7" don_prob="0.810" acc_prob="0.849">
            <gDNA_intron_boundary i_start="68458" i_stop="67935" i_length="524"/>
          </intron>
          <exon e_serial="8" e_score="0.970">
            <gDNA_exon_boundary e_start="67934" e_stop="67703" e_length="232"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72065" stop="71642"/>
              <exon start="70617" stop="70495"/>
              <exon start="70398" stop="70298"/>
              <exon start="69436" stop="69378"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E436302" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72065" stop="71642"/>
              <exon start="70617" stop="70495"/>
              <exon start="70398" stop="70336"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E460589" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70582" stop="70495"/>
              <exon start="70398" stop="70298"/>
              <exon start="69436" stop="69364"/>
              <exon start="68937" stop="68851"/>
              <exon start="68737" stop="68660"/>
              <exon start="68529" stop="68459"/>
              <exon start="67934" stop="67703"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344187" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAATACAAAGATAACGACATTCCTTACTTGTTTCTCGCTACGTTATTGAACCGTTTTTTTCGCCTTATAATAAATCGCTGCGCCTGACGGAAACCGAGGTATAAACAATGGACCCGACGGACGCCGGAGCTCCTCTTCTATCCGACCGGGTTCAAATCAGCGGCAATGTAGTTCCGATGACTCTGACAACTGGAGGAAAACTCCGATGGCTTGACCGGTGTTTGTCAATTGCGAAAGATGTCCTCGGTTTTACCGTCGAAGGTTGTCGGATCAAAATCAATGCCGTCATTGAGAGTGGACCTGGAATTTGCTGCCCCGGTAATGTAGGAGCTTCGATGAGGAAGAATTTCACTTTTGAGCCATTGTCTGAGGATTCTCTTCGGCTTTGGAATCAACGACTCCAATCAGTCATCGATTCGCTCG : GTCGTCCTAAGAGACTTCTTGTACTTCTGAATCCATATGGAGGAAGCCGATCTGCACCCAAAGTATTTAGTGACGATGTAAAGCCCCTGCTAGAGGATGCAAATATTCACTATACACTGCAAG : AAACTAAATATCGGTTACATGCAAAGGAAGTTGCTCATTCGTTGGATCTTTTGCGATATGATGGAGTTCTTTGTGTCAGTGGTGATGGAATTTTGGTTGAG : GTAGTGAATGGACTGCTTGAAAGGGAGGATTGGAGTACTGCAATAAAGATGCCTCTTGGAGTAATACCCGCAG : GAACTTCAAATGGGATGGCCAAGTCTCTTCTAGATTCTGTTGGTGAATCTTGTACTGCATTTAATGCAACTCTTGCTATAATCAGAG : GCCACAAGAGATCACTAGATGTAGCTACAGTTTTACAGGGGCAGAAAAAATATTTCAGTGTGCTGATGCTTGCCTGGG : GTCTTATAGCTGATATAGATATAGAGTCTGAGAAGTATAGGTGGATGGGTAGTGCTCGAATGGATTTTTAT : GCAATACAGCGGATATTTTGTCTTAGAAAGTATCATGGCTGTATCAAATTTGTGGCTGCACCAGGGTTTGAAAATTTTGGAGAACCAAATGAACTTGGAGGTGAAATTGATGAGCTTAACTCGAATTTGGTTATGCAAGATGGCTATTGTGGTCCCACTTTTGACATGAAGGGTTTCAACCGCAAGATTGAGGGGCCTTTTGTCTCAATCTGGCTTCATAATGTACCTTGGG</gDNA_template>
            <first_frame> G  I  Q  R  *  R  H  S  L  L  V  S  R  Y  V  I  E  P  F  F  S  P  Y  N  K  S  L  R  L  T  E  T  E  V  *  T  M  D  P  T  D  A  G  A  P  L  L  S  D  R  V  Q  I  S  G  N  V  V  P  M  T  L  T  T  G  G  K  L  R  W  L  D  R  C  L  S  I  A  K  D  V  L  G  F  T  V  E  G  C  R  I  K  I  N  A  V  I  E  S  G  P  G  I  C  C  P  G  N  V  G  A  S  M  R  K  N  F  T  F  E  P  L  S  E  D  S  L  R  L  W  N  Q  R  L  Q  S  V  I  D  S  L   : G  R  P  K  R  L  L  V  L  L  N  P  Y  G  G  S  R  S  A  P  K  V  F  S  D  D  V  K  P  L  L  E  D  A  N  I  H  Y  T  L  Q   : E  T  K  Y  R  L  H  A  K  E  V  A  H  S  L  D  L  L  R  Y  D  G  V  L  C  V  S  G  D  G  I  L  V  E  :  V  V  N  G  L  L  E  R  E  D  W  S  T  A  I  K  M  P  L  G  V  I  P  A   : G  T  S  N  G  M  A  K  S  L  L  D  S  V  G  E  S  C  T  A  F  N  A  T  L  A  I  I  R   : G  H  K  R  S  L  D  V  A  T  V  L  Q  G  Q  K  K  Y  F  S  V  L  M  L  A  W   : G  L  I  A  D  I  D  I  E  S  E  K  Y  R  W  M  G  S  A  R  M  D  F  Y  :  A  I  Q  R  I  F  C  L  R  K  Y  H  G  C  I  K  F  V  A  A  P  G  F  E  N  F  G  E  P  N  E  L  G  G  E  I  D  E  L  N  S  N  L  V  M  Q  D  G  Y  C  G  P  T  F  D  M  K  G  F  N  R  K  I  E  G  P  F  V  S  I  W  L  H  N  V  P  W  </first_frame>
            <second_frame>  E  Y  K  D  N  D  I  P  Y  L  F  L  A  T  L  L  N  R  F  F  R  L  I  I  N  R  C  A  *  R  K  P  R  Y  K  Q  W  T  R  R  T  P  E  L  L  F  Y  P  T  G  F  K  S  A  A  M  *  F  R  *  L  *  Q  L  E  E  N  S  D  G  L  T  G  V  C  Q  L  R  K  M  S  S  V  L  P  S  K  V  V  G  S  K  S  M  P  S  L  R  V  D  L  E  F  A  A  P  V  M  *  E  L  R  *  G  R  I  S  L  L  S  H  C  L  R  I  L  F  G  F  G  I  N  D  S  N  Q  S  S  I  R  S  :  V  V  L  R  D  F  L  Y  F  *  I  H  M  E  E  A  D  L  H  P  K  Y  L  V  T  M  *  S  P  C  *  R  M  Q  I  F  T  I  H  C  K  :  K  L  N  I  G  Y  M  Q  R  K  L  L  I  R  W  I  F  C  D  M  M  E  F  F  V  S  V  V  M  E  F  W  L  R :   *  *  M  D  C  L  K  G  R  I  G  V  L  Q  *  R  C  L  L  E  *  Y  P  Q  :  E  L  Q  M  G  W  P  S  L  F  *  I  L  L  V  N  L  V  L  H  L  M  Q  L  L  L  *  S  E  :  A  T  R  D  H  *  M  *  L  Q  F  Y  R  G  R  K  N  I  S  V  C  *  C  L  P  G  :  V  L  *  L  I  *  I  *  S  L  R  S  I  G  G  W  V  V  L  E  W  I  F  M :   Q  Y  S  G  Y  F  V  L  E  S  I  M  A  V  S  N  L  W  L  H  Q  G  L  K  I  L  E  N  Q  M  N  L  E  V  K  L  M  S  L  T  R  I  W  L  C  K  M  A  I  V  V  P  L  L  T  *  R  V  S  T  A  R  L  R  G  L  L  S  Q  S  G  F  I  M  Y  L  G </second_frame>
            <third_frame>   N  T  K  I  T  T  F  L  T  C  F  S  L  R  Y  *  T  V  F  F  A  L  *  *  I  A  A  P  D  G  N  R  G  I  N  N  G  P  D  G  R  R  S  S  S  S  I  R  P  G  S  N  Q  R  Q  C  S  S  D  D  S  D  N  W  R  K  T  P  M  A  *  P  V  F  V  N  C  E  R  C  P  R  F  Y  R  R  R  L  S  D  Q  N  Q  C  R  H  *  E  W  T  W  N  L  L  P  R  *  C  R  S  F  D  E  E  E  F  H  F  *  A  I  V  *  G  F  S  S  A  L  E  S  T  T  P  I  S  H  R  F  A  R :   S  S  *  E  T  S  C  T  S  E  S  I  W  R  K  P  I  C  T  Q  S  I  *  *  R  C  K  A  P  A  R  G  C  K  Y  S  L  Y  T  A  R :   N  *  I  S  V  T  C  K  G  S  C  S  F  V  G  S  F  A  I  *  W  S  S  L  C  Q  W  *  W  N  F  G  *   : G  S  E  W  T  A  *  K  G  G  L  E  Y  C  N  K  D  A  S  W  S  N  T  R  R :   N  F  K  W  D  G  Q  V  S  S  R  F  C  W  *  I  L  Y  C  I  *  C  N  S  C  Y  N  Q  R :   P  Q  E  I  T  R  C  S  Y  S  F  T  G  A  E  K  I  F  Q  C  A  D  A  C  L  G :   S  Y  S  *  Y  R  Y  R  V  *  E  V  *  V  D  G  *  C  S  N  G  F  L   : C  N  T  A  D  I  L  S  *  K  V  S  W  L  Y  Q  I  C  G  C  T  R  V  *  K  F  W  R  T  K  *  T  W  R  *  N  *  *  A  *  L  E  F  G  Y  A  R  W  L  L  W  S  H  F  *  H  E  G  F  Q  P  Q  D  *  G  A  F  C  L  N  L  A  S  *  C  T  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71960" stop="71642"/>
                    <exon start="70617" stop="70495"/>
                    <exon start="70398" stop="70298"/>
                    <exon start="69436" stop="69364"/>
                    <exon start="68937" stop="68851"/>
                    <exon start="68737" stop="68660"/>
                    <exon start="68529" stop="68459"/>
                    <exon start="67934" stop="67704"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1083</number_coding_nucleotides>
                  <number_encoded_amino_acids>361</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMDPTDAGAPLLSDRVQISGNVVPMTLTTGGKLRWLDRCLSIAKDVLGFTVEGCRIKINAVIESGPGICCPGNVGASMRKNFTFEPLSEDSLRLWNQRLQSVIDSLGRPKRLLVLLNPYGGSRSAPKVFSDDVKPLLEDANIHYTLQETKYRLHAKEVAHSLDLLRYDGVLCVSGDGILVEVVNGLLEREDWSTAIKMPLGVIPAGTSNGMAKSLLDSVGESCTAFNATLAIIRGHKRSLDVATVLQGQKKYFSVLMLAWGLIADIDIESEKYRWMGSARMDFYAIQRIFCLRKYHGCIKFVAAPGFENFGEPNELGGEIDELNSNLVMQDGYCGPTFDMKGFNRKIEGPFVSIWLHNVPW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="75452" PGL_stop="82574"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="75452" e_stop="75821"/>
            <exon e_start="76945" e_stop="77020"/>
            <exon e_start="77866" e_stop="77924"/>
            <exon e_start="78805" e_stop="79298"/>
            <exon e_start="79385" e_stop="79545"/>
            <exon e_start="79641" e_stop="79844"/>
            <exon e_start="80652" e_stop="80889"/>
            <exon e_start="81488" e_stop="82574"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.931" e_score="0.930"/>
          <exon-intron don_prob="0.710" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.951" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.964" e_score="1.000"/>
          <exon-intron don_prob="0.854" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.928" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.930">
            <gDNA_exon_boundary e_start="75452" e_stop="75821" e_length="370"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.931">
            <gDNA_intron_boundary i_start="75822" i_stop="76944" i_length="1123"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="76945" e_stop="77020" e_length="76"/>
          </exon>
          <intron i_serial="2" don_prob="0.710" acc_prob="1.000">
            <gDNA_intron_boundary i_start="77021" i_stop="77865" i_length="845"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="77866" e_stop="77924" e_length="59"/>
          </exon>
          <intron i_serial="3" don_prob="0.951" acc_prob="0.999">
            <gDNA_intron_boundary i_start="77925" i_stop="78804" i_length="880"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="78805" e_stop="79298" e_length="494"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.964">
            <gDNA_intron_boundary i_start="79299" i_stop="79384" i_length="86"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="79385" e_stop="79545" e_length="161"/>
          </exon>
          <intron i_serial="5" don_prob="0.854" acc_prob="1.000">
            <gDNA_intron_boundary i_start="79546" i_stop="79640" i_length="95"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="79641" e_stop="79844" e_length="204"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.928">
            <gDNA_intron_boundary i_start="79845" i_stop="80651" i_length="807"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="80652" e_stop="80889" e_length="238"/>
          </exon>
          <intron i_serial="7" don_prob="0.968" acc_prob="0.994">
            <gDNA_intron_boundary i_start="80890" i_stop="81487" i_length="598"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="81488" e_stop="82574" e_length="1087"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75452" stop="75821"/>
              <exon start="76945" stop="77020"/>
              <exon start="77866" stop="77924"/>
              <exon start="78805" stop="78981"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E484095" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75487" stop="75821"/>
              <exon start="76945" stop="77020"/>
              <exon start="77866" stop="77924"/>
              <exon start="78805" stop="79070"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E560753" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75524" stop="75821"/>
              <exon start="76945" stop="77020"/>
              <exon start="77866" stop="77924"/>
              <exon start="78805" stop="78889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331683" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75598" stop="75821"/>
              <exon start="76945" stop="77020"/>
              <exon start="77866" stop="77924"/>
              <exon start="78805" stop="79298"/>
              <exon start="79385" stop="79545"/>
              <exon start="79641" stop="79844"/>
              <exon start="80652" stop="80889"/>
              <exon start="81488" stop="82490"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746149" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="75709" stop="75821"/>
              <exon start="76945" stop="77020"/>
              <exon start="77866" stop="77924"/>
              <exon start="78805" stop="79115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E487262" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77881" stop="77924"/>
              <exon start="78805" stop="79128"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279167" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78817" stop="79298"/>
              <exon start="79385" stop="79545"/>
              <exon start="79641" stop="79740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332029" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78840" stop="79298"/>
              <exon start="79385" stop="79438"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441281" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78906" stop="79170"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458331" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79520" stop="79545"/>
              <exon start="79641" stop="79844"/>
              <exon start="80652" stop="80889"/>
              <exon start="81488" stop="81684"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79540" stop="79545"/>
              <exon start="79641" stop="79844"/>
              <exon start="80652" stop="80889"/>
              <exon start="81488" stop="81592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278739" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79690" stop="79844"/>
              <exon start="80652" stop="80889"/>
              <exon start="81488" stop="81680"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250899" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79690" stop="79844"/>
              <exon start="80652" stop="80889"/>
              <exon start="81488" stop="81541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255169" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79724" stop="79844"/>
              <exon start="80652" stop="80889"/>
              <exon start="81488" stop="81897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344977" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80696" stop="80889"/>
              <exon start="81488" stop="81897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80696" stop="80889"/>
              <exon start="81488" stop="81897"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256298" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80705" stop="80889"/>
              <exon start="81488" stop="81914"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264681" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80709" stop="80889"/>
              <exon start="81488" stop="81733"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252060" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80858" stop="80889"/>
              <exon start="81488" stop="82046"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709353" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="80865" stop="80889"/>
              <exon start="81488" stop="81913"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204052" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81515" stop="81915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469158" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81515" stop="81770"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82092" stop="82574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549124" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82092" stop="82574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544935" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82099" stop="82574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309425" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACGAGGAAGCCATCAAAATAGAAACATTCATAGAATGATAGTTCCATGAACTTTCCGAGAAACATCTCTTCATCTTCTTTCTTCTTTCAATTTTTTTCCCGCTTTCCCCTTTTTTCGCTCCTTTTTCTCACTTTCTTCTATCCACTGAGAAAAAAAGAAGAAAATTTTGAGTCTCACTATACGAAACAGACTGTTGAATAATCAAACAAAGAAAAAAGAAAGAAACTTTAGATCAGATCTGAAAATTTGAACAAGAGGAGTGTTTTAATAGTCAAAGAAAATGCAGACAAGGTATATGGAGAAACGTGTTTTGGATCCAAGTAGTAGTGAGGAAGGTCAACCTGATAGGAAAAGACCTGCTCTTGCAAG : TGTCATTGTTGAAGCGCTAAAGGTGGACAGTCTGCAAAAACTCTGCTCATCACTGGAGCCAATTCTTCGAAGAGTT : GTTAGTGAAGAAGTGGAGCGTGCTTTGGCTAAACTTGGACCTGCTAAACTTAATGCAAG : GGTTTCGCCAAAAAGAATTGAAGGACCTGATGGGAGAAATTTGCAGCTTCAGTTTCGGTCCAAACTGTCACTACCTCTCTTCACTGGAGGAAAAGTAGAAGGAGAGCAGGGTTCCGCAATACATATTGTCTTGATTGATGGAAATACAAACCATGTTGTAACATCAGGTCCCGAGTCCTTGGTTAAGTTAGATGTTGTTGTGCTTGAAGGAGATTTTAACAATGAGGATGATGATGGCTGGACTCAAGAAGAATTTGAGTCTCATATCGTCAAGGAGCGTGAAGGCAAGAGGCCTCTCCTTACTGGAGAATTGCAAGTGATATTGAAGGAAGGTGTTGGCACCCTTGGCGAGTTGACATTTACTGACAACTCCAGCTGGATCAGAAGCAGAAAGTTCAGGCTAGGCTTAAAGGTGGCATCAGGTTGCTGTGAGGGAATCCGCATTCGTGAGGCAAAAACAGATGCCTTCACTGTCAAGGATCATAGAGGAGAAT : TGTACAAGAAACATTATCCACCTGCATTAGATGATGAAGTTTGGAGATTGGAAAAGATAGGGAAAGATGGATCCTTCCACAAGAGGCTAAATAAAGCTGGCATACATAAAGTGGAAGACTTTCTGCGTCTTGTTGTGAGAGACTCGCAGAGGCTCCGAAAT : GTCCTGGGAAGTGGAATGTCAAATAAAATGTGGGATGCTCTTCTGGACCATGCAAAAACCTGTGTACTAAGTGGGAAGCTATATGTCTACTATCCTGATGATATGAGAAATGTCGGTGTTGTTTTTAATAATATCTATGAATTATGTGGTTTAATCTCTGGCGGACAGTATCATTCAATGGATTCTCTTTCAGACAATCAGAAG : ATATATGTGGATACTTTAGTTAAGAAGGCGTATGACAACTGGATGCAAGTTGTTGAGTATGATGGAAAATCTCTCCTAAGCCTGGGCCAGAATAAAGCCGCAGTTTCGTCTCAAAATGATCCTACAATTGGCTCTCAGAACCATACAATCTCTTTTGATCAACAAACTAATCTACCAAGTCTTCCAGCTTCAATATCATCAGAGCAGCCTTCTATGAATTCAGGACTGAACATGGGAG : GGTATAATGATAGCCTCAGTGGCAGATACACTATGCAGCCTCAGAACATGAATCTAAATGGCAACATGCAGTTAAATGGTGCTTCGTTTCCTCAGAACCATTTGCTCGGCACGTCACAACAAGCTCAGCCGCATGGGAGTGATAGCATGCTGGCCCTTCGCCCACCACAGCCATCAATGTCTAGCTATTTTGCTGCTAGCACGCCTAATCCTTATAAGGGAGCTGAGGACTTCTTAACAGAGGAAGAGATACGTATGAAAAGTCATGAGATGCTCGAAAATGAAGACATGCAACATTTGCTACGTATGTTCAGCATGGGACAGGGTCATGCGTCTTCTAGTGTTGCAGAAGAGAATTACCAGTATGGATCAGCATACATGCCCAGCATGTCTTCTAATTTTGGTTTTGATGAGGAACGTACACGTTCTTCAGGTAAGGCTGTTGTAGGGTGGCTCAAACTCAAAGCTGCCTTGAGATGGGGCATTTTCATAAGGAAGAAAGCTGCAGAAAGAAGAGCACAAATTACTGAACTGGATGACTCTTAGATTTGATTTTCCCCTTAGCAACCACTTGGATATGATGTGTAAGGGCTTTCCTCTAAGAAGCATATTATCGATCTTGGAATTTGGTTTGACAATCCATATGCATCTGGTGCTGGGTTGGGCTCAATCTGAACCTAGGAGCCTCTTATAATGTACAGTTATGCCTGTCCATGGAGATTGCTCTCTCTCCATTAACAGAATAACATAAGCTTATGATAGTTCTCTCAGCATATTATATGCAGTTCAAAGACTGGAGCAGTTTTCATGGCTCTAGCTGAAGGGAAATTCCCATGGTTTAGACCTGATTTCTTCTACTAGGGACTGAAGGAAGTGACTTCATTTGCCTTGTGCTAACTCAAGATTGTAGCAAGTATGTTTTGATGAGTTATGTTTGACTGATGCTGTAATTTTTAGTGTTTTGTTGTAATGAGTTTATCAAAAGAAAACATAATATTTGTCTCATAGAAACATTTGTTGTGAACATATCATTAAAATGTGATGTGGTAAACCTTCAAAAATTTGTTATATTGAACGAATAATCTTGT</gDNA_template>
            <first_frame> N  E  E  A  I  K  I  E  T  F  I  E  *  *  F  H  E  L  S  E  K  H  L  F  I  F  F  L  L  S  I  F  F  P  L  S  P  F  F  A  P  F  S  H  F  L  L  S  T  E  K  K  R  R  K  F  *  V  S  L  Y  E  T  D  C  *  I  I  K  Q  R  K  K  K  E  T  L  D  Q  I  *  K  F  E  Q  E  E  C  F  N  S  Q  R  K  C  R  Q  G  I  W  R  N  V  F  W  I  Q  V  V  V  R  K  V  N  L  I  G  K  D  L  L  L  Q   : V  S  L  L  K  R  *  R  W  T  V  C  K  N  S  A  H  H  W  S  Q  F  F  E  E  L :   L  V  K  K  W  S  V  L  W  L  N  L  D  L  L  N  L  M  Q   : G  F  R  Q  K  E  L  K  D  L  M  G  E  I  C  S  F  S  F  G  P  N  C  H  Y  L  S  S  L  E  E  K  *  K  E  S  R  V  P  Q  Y  I  L  S  *  L  M  E  I  Q  T  M  L  *  H  Q  V  P  S  P  W  L  S  *  M  L  L  C  L  K  E  I  L  T  M  R  M  M  M  A  G  L  K  K  N  L  S  L  I  S  S  R  S  V  K  A  R  G  L  S  L  L  E  N  C  K  *  Y  *  R  K  V  L  A  P  L  A  S  *  H  L  L  T  T  P  A  G  S  E  A  E  S  S  G  *  A  *  R  W  H  Q  V  A  V  R  E  S  A  F  V  R  Q  K  Q  M  P  S  L  S  R  I  I  E  E  N  :  C  T  R  N  I  I  H  L  H  *  M  M  K  F  G  D  W  K  R  *  G  K  M  D  P  S  T  R  G  *  I  K  L  A  Y  I  K  W  K  T  F  C  V  L  L  *  E  T  R  R  G  S  E  M :   S  W  E  V  E  C  Q  I  K  C  G  M  L  F  W  T  M  Q  K  P  V  Y  *  V  G  S  Y  M  S  T  I  L  M  I  *  E  M  S  V  L  F  L  I  I  S  M  N  Y  V  V  *  S  L  A  D  S  I  I  Q  W  I  L  F  Q  T  I  R  R :   Y  M  W  I  L  *  L  R  R  R  M  T  T  G  C  K  L  L  S  M  M  E  N  L  S  *  A  W  A  R  I  K  P  Q  F  R  L  K  M  I  L  Q  L  A  L  R  T  I  Q  S  L  L  I  N  K  L  I  Y  Q  V  F  Q  L  Q  Y  H  Q  S  S  L  L  *  I  Q  D  *  T  W  E  :  G  I  M  I  A  S  V  A  D  T  L  C  S  L  R  T  *  I  *  M  A  T  C  S  *  M  V  L  R  F  L  R  T  I  C  S  A  R  H  N  K  L  S  R  M  G  V  I  A  C  W  P  F  A  H  H  S  H  Q  C  L  A  I  L  L  L  A  R  L  I  L  I  R  E  L  R  T  S  *  Q  R  K  R  Y  V  *  K  V  M  R  C  S  K  M  K  T  C  N  I  C  Y  V  C  S  A  W  D  R  V  M  R  L  L  V  L  Q  K  R  I  T  S  M  D  Q  H  T  C  P  A  C  L  L  I  L  V  L  M  R  N  V  H  V  L  Q  V  R  L  L  *  G  G  S  N  S  K  L  P  *  D  G  A  F  S  *  G  R  K  L  Q  K  E  E  H  K  L  L  N  W  M  T  L  R  F  D  F  P  L  S  N  H  L  D  M  M  C  K  G  F  P  L  R  S  I  L  S  I  L  E  F  G  L  T  I  H  M  H  L  V  L  G  W  A  Q  S  E  P  R  S  L  L  *  C  T  V  M  P  V  H  G  D  C  S  L  S  I  N  R  I  T  *  A  Y  D  S  S  L  S  I  L  Y  A  V  Q  R  L  E  Q  F  S  W  L  *  L  K  G  N  S  H  G  L  D  L  I  S  S  T  R  D  *  R  K  *  L  H  L  P  C  A  N  S  R  L  *  Q  V  C  F  D  E  L  C  L  T  D  A  V  I  F  S  V  L  L  *  *  V  Y  Q  K  K  T  *  Y  L  S  H  R  N  I  C  C  E  H  I  I  K  M  *  C  G  K  P  S  K  I  C  Y  I  E  R  I  I  L  </first_frame>
            <second_frame>  T  R  K  P  S  K  *  K  H  S  *  N  D  S  S  M  N  F  P  R  N  I  S  S  S  S  F  F  F  Q  F  F  S  R  F  P  L  F  S  L  L  F  L  T  F  F  Y  P  L  R  K  K  E  E  N  F  E  S  H  Y  T  K  Q  T  V  E  *  S  N  K  E  K  R  K  K  L  *  I  R  S  E  N  L  N  K  R  S  V  L  I  V  K  E  N  A  D  K  V  Y  G  E  T  C  F  G  S  K  *  *  *  G  R  S  T  *  *  E  K  T  C  S  C  K  :  C  H  C  *  S  A  K  G  G  Q  S  A  K  T  L  L  I  T  G  A  N  S  S  K  S   : C  *  *  R  S  G  A  C  F  G  *  T  W  T  C  *  T  *  C  K  :  G  F  A  K  K  N  *  R  T  *  W  E  K  F  A  A  S  V  S  V  Q  T  V  T  T  S  L  H  W  R  K  S  R  R  R  A  G  F  R  N  T  Y  C  L  D  *  W  K  Y  K  P  C  C  N  I  R  S  R  V  L  G  *  V  R  C  C  C  A  *  R  R  F  *  Q  *  G  *  *  W  L  D  S  R  R  I  *  V  S  Y  R  Q  G  A  *  R  Q  E  A  S  P  Y  W  R  I  A  S  D  I  E  G  R  C  W  H  P  W  R  V  D  I  Y  *  Q  L  Q  L  D  Q  K  Q  K  V  Q  A  R  L  K  G  G  I  R  L  L  *  G  N  P  H  S  *  G  K  N  R  C  L  H  C  Q  G  S  *  R  R  I :   V  Q  E  T  L  S  T  C  I  R  *  *  S  L  E  I  G  K  D  R  E  R  W  I  L  P  Q  E  A  K  *  S  W  H  T  *  S  G  R  L  S  A  S  C  C  E  R  L  A  E  A  P  K   : C  P  G  K  W  N  V  K  *  N  V  G  C  S  S  G  P  C  K  N  L  C  T  K  W  E  A  I  C  L  L  S  *  *  Y  E  K  C  R  C  C  F  *  *  Y  L  *  I  M  W  F  N  L  W  R  T  V  S  F  N  G  F  S  F  R  Q  S  E   : D  I  C  G  Y  F  S  *  E  G  V  *  Q  L  D  A  S  C  *  V  *  W  K  I  S  P  K  P  G  P  E  *  S  R  S  F  V  S  K  *  S  Y  N  W  L  S  E  P  Y  N  L  F  *  S  T  N  *  S  T  K  S  S  S  F  N  I  I  R  A  A  F  Y  E  F  R  T  E  H  G  R :   V  *  *  *  P  Q  W  Q  I  H  Y  A  A  S  E  H  E  S  K  W  Q  H  A  V  K  W  C  F  V  S  S  E  P  F  A  R  H  V  T  T  S  S  A  A  W  E  *  *  H  A  G  P  S  P  T  T  A  I  N  V  *  L  F  C  C  *  H  A  *  S  L  *  G  S  *  G  L  L  N  R  G  R  D  T  Y  E  K  S  *  D  A  R  K  *  R  H  A  T  F  A  T  Y  V  Q  H  G  T  G  S  C  V  F  *  C  C  R  R  E  L  P  V  W  I  S  I  H  A  Q  H  V  F  *  F  W  F  *  *  G  T  Y  T  F  F  R  *  G  C  C  R  V  A  Q  T  Q  S  C  L  E  M  G  H  F  H  K  E  E  S  C  R  K  K  S  T  N  Y  *  T  G  *  L  L  D  L  I  F  P  L  A  T  T  W  I  *  C  V  R  A  F  L  *  E  A  Y  Y  R  S  W  N  L  V  *  Q  S  I  C  I  W  C  W  V  G  L  N  L  N  L  G  A  S  Y  N  V  Q  L  C  L  S  M  E  I  A  L  S  P  L  T  E  *  H  K  L  M  I  V  L  S  A  Y  Y  M  Q  F  K  D  W  S  S  F  H  G  S  S  *  R  E  I  P  M  V  *  T  *  F  L  L  L  G  T  E  G  S  D  F  I  C  L  V  L  T  Q  D  C  S  K  Y  V  L  M  S  Y  V  *  L  M  L  *  F  L  V  F  C  C  N  E  F  I  K  R  K  H  N  I  C  L  I  E  T  F  V  V  N  I  S  L  K  C  D  V  V  N  L  Q  K  F  V  I  L  N  E  *  S  C </second_frame>
            <third_frame>   R  G  S  H  Q  N  R  N  I  H  R  M  I  V  P  *  T  F  R  E  T  S  L  H  L  L  S  S  F  N  F  F  P  A  F  P  F  F  R  S  F  F  S  L  S  S  I  H  *  E  K  K  K  K  I  L  S  L  T  I  R  N  R  L  L  N  N  Q  T  K  K  K  E  R  N  F  R  S  D  L  K  I  *  T  R  G  V  F  *  *  S  K  K  M  Q  T  R  Y  M  E  K  R  V  L  D  P  S  S  S  E  E  G  Q  P  D  R  K  R  P  A  L  A  S :   V  I  V  E  A  L  K  V  D  S  L  Q  K  L  C  S  S  L  E  P  I  L  R  R  V  :  V  S  E  E  V  E  R  A  L  A  K  L  G  P  A  K  L  N  A  R :   V  S  P  K  R  I  E  G  P  D  G  R  N  L  Q  L  Q  F  R  S  K  L  S  L  P  L  F  T  G  G  K  V  E  G  E  Q  G  S  A  I  H  I  V  L  I  D  G  N  T  N  H  V  V  T  S  G  P  E  S  L  V  K  L  D  V  V  V  L  E  G  D  F  N  N  E  D  D  D  G  W  T  Q  E  E  F  E  S  H  I  V  K  E  R  E  G  K  R  P  L  L  T  G  E  L  Q  V  I  L  K  E  G  V  G  T  L  G  E  L  T  F  T  D  N  S  S  W  I  R  S  R  K  F  R  L  G  L  K  V  A  S  G  C  C  E  G  I  R  I  R  E  A  K  T  D  A  F  T  V  K  D  H  R  G  E   : L  Y  K  K  H  Y  P  P  A  L  D  D  E  V  W  R  L  E  K  I  G  K  D  G  S  F  H  K  R  L  N  K  A  G  I  H  K  V  E  D  F  L  R  L  V  V  R  D  S  Q  R  L  R  N  :  V  L  G  S  G  M  S  N  K  M  W  D  A  L  L  D  H  A  K  T  C  V  L  S  G  K  L  Y  V  Y  Y  P  D  D  M  R  N  V  G  V  V  F  N  N  I  Y  E  L  C  G  L  I  S  G  G  Q  Y  H  S  M  D  S  L  S  D  N  Q  K  :  I  Y  V  D  T  L  V  K  K  A  Y  D  N  W  M  Q  V  V  E  Y  D  G  K  S  L  L  S  L  G  Q  N  K  A  A  V  S  S  Q  N  D  P  T  I  G  S  Q  N  H  T  I  S  F  D  Q  Q  T  N  L  P  S  L  P  A  S  I  S  S  E  Q  P  S  M  N  S  G  L  N  M  G   : G  Y  N  D  S  L  S  G  R  Y  T  M  Q  P  Q  N  M  N  L  N  G  N  M  Q  L  N  G  A  S  F  P  Q  N  H  L  L  G  T  S  Q  Q  A  Q  P  H  G  S  D  S  M  L  A  L  R  P  P  Q  P  S  M  S  S  Y  F  A  A  S  T  P  N  P  Y  K  G  A  E  D  F  L  T  E  E  E  I  R  M  K  S  H  E  M  L  E  N  E  D  M  Q  H  L  L  R  M  F  S  M  G  Q  G  H  A  S  S  S  V  A  E  E  N  Y  Q  Y  G  S  A  Y  M  P  S  M  S  S  N  F  G  F  D  E  E  R  T  R  S  S  G  K  A  V  V  G  W  L  K  L  K  A  A  L  R  W  G  I  F  I  R  K  K  A  A  E  R  R  A  Q  I  T  E  L  D  D  S  *  I  *  F  S  P  *  Q  P  L  G  Y  D  V  *  G  L  S  S  K  K  H  I  I  D  L  G  I  W  F  D  N  P  Y  A  S  G  A  G  L  G  S  I  *  T  *  E  P  L  I  M  Y  S  Y  A  C  P  W  R  L  L  S  L  H  *  Q  N  N  I  S  L  *  *  F  S  Q  H  I  I  C  S  S  K  T  G  A  V  F  M  A  L  A  E  G  K  F  P  W  F  R  P  D  F  F  Y  *  G  L  K  E  V  T  S  F  A  L  C  *  L  K  I  V  A  S  M  F  *  *  V  M  F  D  *  C  C  N  F  *  C  F  V  V  M  S  L  S  K  E  N  I  I  F  V  S  *  K  H  L  L  *  T  Y  H  *  N  V  M  W  *  T  F  K  N  L  L  Y  *  T  N  N  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="75724" stop="75821"/>
                    <exon start="76945" stop="77020"/>
                    <exon start="77866" stop="77924"/>
                    <exon start="78805" stop="79298"/>
                    <exon start="79385" stop="79545"/>
                    <exon start="79641" stop="79844"/>
                    <exon start="80652" stop="80889"/>
                    <exon start="81488" stop="82032"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1872</number_coding_nucleotides>
                  <number_encoded_amino_acids>624</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKKMQTRYMEKRVLDPSSSEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLNARVSPKRIEGPDGRNLQLQFRSKLSLPLFTGGKVEGEQGSAIHIVLIDGNTNHVVTSGPESLVKLDVVVLEGDFNNEDDDGWTQEEFESHIVKEREGKRPLLTGELQVILKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGCCEGIRIREAKTDAFTVKDHRGELYKKHYPPALDDEVWRLEKIGKDGSFHKRLNKAGIHKVEDFLRLVVRDSQRLRNVLGSGMSNKMWDALLDHAKTCVLSGKLYVYYPDDMRNVGVVFNNIYELCGLISGGQYHSMDSLSDNQKIYVDTLVKKAYDNWMQVVEYDGKSLLSLGQNKAAVSSQNDPTIGSQNHTISFDQQTNLPSLPASISSEQPSMNSGLNMGGYNDSLSGRYTMQPQNMNLNGNMQLNGASFPQNHLLGTSQQAQPHGSDSMLALRPPQPSMSSYFAASTPNPYKGAEDFLTEEEIRMKSHEMLENEDMQHLLRMFSMGQGHASSSVAEENYQYGSAYMPSMSSNFGFDEERTRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQITELDDS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="82601" PGL_stop="81894"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="82601" e_stop="81894"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.929"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.929">
            <gDNA_exon_boundary e_start="82601" e_stop="81894" e_length="708"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82601" stop="81894"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573806" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="82555" stop="81918"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E429900" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCCTCAAATATTCAAAGTAATAAGAAACAAGATTATTCGTTCAATATAACAAATTTTTGAAGGTTTACCACATCACATTTTAATGATATGTTCACAACAAATGTTTCTATGAGACAAATATTATGTTTTCTTTTGATAAACTCATTACAACAAAACACTAAAAATTACAGCATCAGTCAAACATAACTCATCAAAACATACTTGCTACAATCTTGAGTTAGCACAAGGCAAATGAAGTCACTTCCTTCAGTCCCTAGTAGAAGAAATCAGGTCTAAACCATGGGAATTTCCCTTCAGCTAGAGCCATGAAAACTGCTCCAGTCTTTGAACTGCATATAATATGCTGAGAGAACTATCATAAGCTTATGTTATTCTGTTAATGGAGAGAGAGCAATCTCCATGGACAGGCATAACTGTACATTATAAGAGGCTCCTAGGTTCAGATTGAGCCCAACCCAGCACCAGATGCATATGGATTGTCAAACCAAATTCCAAGATCGATAATATGCTTCTTAGAGGAAAGCCCTTACACATCATATCCAAGTGGTTGCTAAGGGGAAAATCAAATCTAAGAGTCATCCAGTTCAGTAATTTGTGCTCTTCTTTCTGCAGCTTTCTTCCTTATGAAAATGCCCCATCTCAAGGCAGCTTTGAGTTTGAGCCACCCTACAACAGCCTTACCTGAAGAACGTGTACGTTCCTCATCA</gDNA_template>
            <first_frame> I  L  K  Y  S  K  *  *  E  T  R  L  F  V  Q  Y  N  K  F  L  K  V  Y  H  I  T  F  *  *  Y  V  H  N  K  C  F  Y  E  T  N  I  M  F  S  F  D  K  L  I  T  T  K  H  *  K  L  Q  H  Q  S  N  I  T  H  Q  N  I  L  A  T  I  L  S  *  H  K  A  N  E  V  T  S  F  S  P  *  *  K  K  S  G  L  N  H  G  N  F  P  S  A  R  A  M  K  T  A  P  V  F  E  L  H  I  I  C  *  E  N  Y  H  K  L  M  L  F  C  *  W  R  E  S  N  L  H  G  Q  A  *  L  Y  I  I  R  G  S  *  V  Q  I  E  P  N  P  A  P  D  A  Y  G  L  S  N  Q  I  P  R  S  I  I  C  F  L  E  E  S  P  Y  T  S  Y  P  S  G  C  *  G  E  N  Q  I  *  E  S  S  S  S  V  I  C  A  L  L  S  A  A  F  F  L  M  K  M  P  H  L  K  A  A  L  S  L  S  H  P  T  T  A  L  P  E  E  R  V  R  S  S  S </first_frame>
            <second_frame>  S  S  N  I  Q  S  N  K  K  Q  D  Y  S  F  N  I  T  N  F  *  R  F  T  T  S  H  F  N  D  M  F  T  T  N  V  S  M  R  Q  I  L  C  F  L  L  I  N  S  L  Q  Q  N  T  K  N  Y  S  I  S  Q  T  *  L  I  K  T  Y  L  L  Q  S  *  V  S  T  R  Q  M  K  S  L  P  S  V  P  S  R  R  N  Q  V  *  T  M  G  I  S  L  Q  L  E  P  *  K  L  L  Q  S  L  N  C  I  *  Y  A  E  R  T  I  I  S  L  C  Y  S  V  N  G  E  R  A  I  S  M  D  R  H  N  C  T  L  *  E  A  P  R  F  R  L  S  P  T  Q  H  Q  M  H  M  D  C  Q  T  K  F  Q  D  R  *  Y  A  S  *  R  K  A  L  T  H  H  I  Q  V  V  A  K  G  K  I  K  S  K  S  H  P  V  Q  *  F  V  L  F  F  L  Q  L  S  S  L  *  K  C  P  I  S  R  Q  L  *  V  *  A  T  L  Q  Q  P  Y  L  K  N  V  Y  V  P  H   </second_frame>
            <third_frame>   P  Q  I  F  K  V  I  R  N  K  I  I  R  S  I  *  Q  I  F  E  G  L  P  H  H  I  L  M  I  C  S  Q  Q  M  F  L  *  D  K  Y  Y  V  F  F  *  *  T  H  Y  N  K  T  L  K  I  T  A  S  V  K  H  N  S  S  K  H  T  C  Y  N  L  E  L  A  Q  G  K  *  S  H  F  L  Q  S  L  V  E  E  I  R  S  K  P  W  E  F  P  F  S  *  S  H  E  N  C  S  S  L  *  T  A  Y  N  M  L  R  E  L  S  *  A  Y  V  I  L  L  M  E  R  E  Q  S  P  W  T  G  I  T  V  H  Y  K  R  L  L  G  S  D  *  A  Q  P  S  T  R  C  I  W  I  V  K  P  N  S  K  I  D  N  M  L  L  R  G  K  P  L  H  I  I  S  K  W  L  L  R  G  K  S  N  L  R  V  I  Q  F  S  N  L  C  S  S  F  C  S  F  L  P  Y  E  N  A  P  S  Q  G  S  F  E  F  E  P  P  Y  N  S  L  T  *  R  T  C  T  F  L  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="82152" stop="81916"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AQPSTRCIWIVKPNSKIDNMLLRGKPLHIISKWLLRGKSNLRVIQFSNLCSSFCSFLPYENAPSQGSFEFEPPYNSLT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="84205" PGL_stop="82831"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84205" e_stop="84091"/>
            <exon e_start="83997" e_stop="83845"/>
            <exon e_start="83623" e_stop="83542"/>
            <exon e_start="83092" e_stop="82831"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.980" acc_prob="0.783" e_score="0.964"/>
          <exon-intron don_prob="0.988" acc_prob="0.929" e_score="0.974"/>
          <exon-intron don_prob="0.975" acc_prob="0.683" e_score="1.000"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.964">
            <gDNA_exon_boundary e_start="84205" e_stop="84091" e_length="115"/>
          </exon>
          <intron i_serial="1" don_prob="0.980" acc_prob="0.783">
            <gDNA_intron_boundary i_start="84090" i_stop="83998" i_length="93"/>
          </intron>
          <exon e_serial="2" e_score="0.974">
            <gDNA_exon_boundary e_start="83997" e_stop="83845" e_length="153"/>
          </exon>
          <intron i_serial="2" don_prob="0.988" acc_prob="0.929">
            <gDNA_intron_boundary i_start="83844" i_stop="83624" i_length="221"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="83623" e_stop="83542" e_length="82"/>
          </exon>
          <intron i_serial="3" don_prob="0.975" acc_prob="0.683">
            <gDNA_intron_boundary i_start="83541" i_stop="83093" i_length="449"/>
          </intron>
          <exon e_serial="4" e_score="0.985">
            <gDNA_exon_boundary e_start="83092" e_stop="82831" e_length="262"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84205" stop="84091"/>
              <exon start="83997" stop="83845"/>
              <exon start="83623" stop="83542"/>
              <exon start="83092" stop="82831"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E690702" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84202" stop="84091"/>
              <exon start="83997" stop="83845"/>
              <exon start="83623" stop="83542"/>
              <exon start="83092" stop="82833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E694542" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTCAGGGGCCTTGCACGTGATTTGAGCAAAGTGGACAGTATACGTGATCCCATAGAAGCGGCCCTCTTATGTATTCCTGATGGATATCACTGTATTGATCTCTCGCTTTATAAA : GAGGGTCAAATTGTTTTACTATTAAACGAAACTGCAACCACTTCGGAGAGCTCTGGAAATGCTTTCATGATGATTCTACAAGCTGGTGACCTTTCATTTGTATCTCTTTCAAGATCTACCGCCCCCAATTCTTGGAAGCTTCACGAACTTCAG : GATTCTGCTATATACCTGCAACTGGAGAGTGAAAAGGTTCGAAGCATTCCTCATTCTGTGGTCTCTCCCTTGGCAGTTAGTG : CATCAAGAGGTGTAGCTTGTGTTTTTGCTGCAAGAAAGCGTGCTTTGGTTTACATCTTGGACGAAGATGAAGATGAAGTTTCTGATACAGAGTGACAGTACCTTGCTGTTCGCTGGGTCTTTTGCAGGATCTATCAATTTTGGGCAGATAAGCCAGTGTCTATCCCTTTTTACTAAATTGTAGACTCTTTGTACACTTCTAGTTAATAGTTATTAGTTGGATGATGTTAAAGCTGAAGAATCAACAAAATTCTACTTCACAT</gDNA_template>
            <first_frame> C  Q  G  P  C  T  *  F  E  Q  S  G  Q  Y  T  *  S  H  R  S  G  P  L  M  Y  S  *  W  I  S  L  Y  *  S  L  A  L  *   : R  G  S  N  C  F  T  I  K  R  N  C  N  H  F  G  E  L  W  K  C  F  H  D  D  S  T  S  W  *  P  F  I  C  I  S  F  K  I  Y  R  P  Q  F  L  E  A  S  R  T  S   : G  F  C  Y  I  P  A  T  G  E  *  K  G  S  K  H  S  S  F  C  G  L  S  L  G  S  *  C :   I  K  R  C  S  L  C  F  C  C  K  K  A  C  F  G  L  H  L  G  R  R  *  R  *  S  F  *  Y  R  V  T  V  P  C  C  S  L  G  L  L  Q  D  L  S  I  L  G  R  *  A  S  V  Y  P  F  L  L  N  C  R  L  F  V  H  F  *  L  I  V  I  S  W  M  M  L  K  L  K  N  Q  Q  N  S  T  S  H </first_frame>
            <second_frame>  V  R  G  L  A  R  D  L  S  K  V  D  S  I  R  D  P  I  E  A  A  L  L  C  I  P  D  G  Y  H  C  I  D  L  S  L  Y  K  :  E  G  Q  I  V  L  L  L  N  E  T  A  T  T  S  E  S  S  G  N  A  F  M  M  I  L  Q  A  G  D  L  S  F  V  S  L  S  R  S  T  A  P  N  S  W  K  L  H  E  L  Q  :  D  S  A  I  Y  L  Q  L  E  S  E  K  V  R  S  I  P  H  S  V  V  S  P  L  A  V  S   : A  S  R  G  V  A  C  V  F  A  A  R  K  R  A  L  V  Y  I  L  D  E  D  E  D  E  V  S  D  T  E  *  Q  Y  L  A  V  R  W  V  F  C  R  I  Y  Q  F  W  A  D  K  P  V  S  I  P  F  Y  *  I  V  D  S  L  Y  T  S  S  *  *  L  L  V  G  *  C  *  S  *  R  I  N  K  I  L  L  H   </second_frame>
            <third_frame>   S  G  A  L  H  V  I  *  A  K  W  T  V  Y  V  I  P  *  K  R  P  S  Y  V  F  L  M  D  I  T  V  L  I  S  R  F  I  K :   R  V  K  L  F  Y  Y  *  T  K  L  Q  P  L  R  R  A  L  E  M  L  S  *  *  F  Y  K  L  V  T  F  H  L  Y  L  F  Q  D  L  P  P  P  I  L  G  S  F  T  N  F  R :   I  L  L  Y  T  C  N  W  R  V  K  R  F  E  A  F  L  I  L  W  S  L  P  W  Q  L  V  :  H  Q  E  V  *  L  V  F  L  L  Q  E  S  V  L  W  F  T  S  W  T  K  M  K  M  K  F  L  I  Q  S  D  S  T  L  L  F  A  G  S  F  A  G  S  I  N  F  G  Q  I  S  Q  C  L  S  L  F  T  K  L  *  T  L  C  T  L  L  V  N  S  Y  *  L  D  D  V  K  A  E  E  S  T  K  F  Y  F  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84204" stop="84091"/>
                    <exon start="83997" stop="83845"/>
                    <exon start="83623" stop="83542"/>
                    <exon start="83092" stop="82998"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>441</number_coding_nucleotides>
                  <number_encoded_amino_acids>147</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VRGLARDLSKVDSIRDPIEAALLCIPDGYHCIDLSLYKEGQIVLLLNETATTSESSGNAFMMILQAGDLSFVSLSRSTAPNSWKLHELQDSAIYLQLESEKVRSIPHSVVSPLAVSASRGVACVFAARKRALVYILDEDEDEVSDTE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="95792" PGL_stop="90490"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="95792" e_stop="95700"/>
            <exon e_start="94807" e_stop="94730"/>
            <exon e_start="93985" e_stop="93746"/>
            <exon e_start="93616" e_stop="93536"/>
            <exon e_start="93083" e_stop="92941"/>
            <exon e_start="90769" e_stop="90609"/>
            <exon e_start="90521" e_stop="90490"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.982" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.838" acc_prob="0.144" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.859" e_score="1.000"/>
          <exon-intron don_prob="0.942" acc_prob="0.859" e_score="1.000"/>
          <exon-intron don_prob="0.743" acc_prob="0.904" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="95792" e_stop="95700" e_length="93"/>
          </exon>
          <intron i_serial="1" don_prob="0.982" acc_prob="0.992">
            <gDNA_intron_boundary i_start="95699" i_stop="94808" i_length="892"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="94807" e_stop="94730" e_length="78"/>
          </exon>
          <intron i_serial="2" don_prob="0.974" acc_prob="0.959">
            <gDNA_intron_boundary i_start="94729" i_stop="93986" i_length="744"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="93985" e_stop="93746" e_length="240"/>
          </exon>
          <intron i_serial="3" don_prob="0.838" acc_prob="0.144">
            <gDNA_intron_boundary i_start="93745" i_stop="93617" i_length="129"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="93616" e_stop="93536" e_length="81"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.859">
            <gDNA_intron_boundary i_start="93535" i_stop="93084" i_length="452"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="93083" e_stop="92941" e_length="143"/>
          </exon>
          <intron i_serial="5" don_prob="0.942" acc_prob="0.859">
            <gDNA_intron_boundary i_start="92940" i_stop="90770" i_length="2171"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="90769" e_stop="90609" e_length="161"/>
          </exon>
          <intron i_serial="6" don_prob="0.743" acc_prob="0.904">
            <gDNA_intron_boundary i_start="90608" i_stop="90522" i_length="87"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="90521" e_stop="90490" e_length="32"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95792" stop="95700"/>
              <exon start="94807" stop="94730"/>
              <exon start="93985" stop="93746"/>
              <exon start="93616" stop="93541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315645" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93888" stop="93746"/>
              <exon start="93616" stop="93536"/>
              <exon start="93083" stop="92941"/>
              <exon start="90769" stop="90609"/>
              <exon start="90521" stop="90490"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212514" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAAAGAACATAACTTCCATATGTTGGCGTCCTGATGGGAAAGCAATTGCAGTTGGGCTTGAAGATGGGACCATCTCCTTGCATGATGTAGAA : AATGGAAAGCTGCTGCGAAACATAAAATCCCACTCGGCTGATGTCGTGTGTCTCCATTGGGAGGAGGATGGGAAGAAG : GACATGAACAGTAATACCTCCAGTTATGAAGATCGAACTTCACGGTTCTTTCCTCCTCCCCCTAGAGTTCCTAAGATGCCTGGACTTGTACCTGGGGATAGTGGCTTCATGGATGATGGAGAGGATTCTTTCCAGGAGCTATCAAATTCTTCACATCAAAGATATAACATTTTATGTAGCGGGGACAAGGATGGAAGTATCTGCTTCAATATCTTTGGCATATTTCCAATAGGGACAGTT : AATATACACAACCTTGTTGTCTCCAGTTCACTCTCAAGCAGCAATGTTGCTAGCCGACTTCTGAATGCTTCCATTTGTAAG : GTGGCCTTGTCCAAAGATCTTTGCCATTTAGTAGTTTTGTGCAATGGGGAGCTGATCACAGATGAGGTTGATCAAGGTGAAGGACATCATGGGTTACTTGGCTTTCACTGCTTAGTCCTCAATACTTCAATATTTTCCAAAAG : GAAAACTGAACTTCACCAGGTTGCCCAACAGGCTTCCAACATTGAAGATCTGAGTGAAGTCATCCGGACATCACTATCAGTCATGTCTAAAATATGGTCCGATGCTATGCATACATTTCACGAGAAGTTCAATGCTGTATCCACATTGATCGCTGATCATG : GACTTGACTCTACTCCTCAGGATGAGTTTCTA</gDNA_template>
            <first_frame> G  K  N  I  T  S  I  C  W  R  P  D  G  K  A  I  A  V  G  L  E  D  G  T  I  S  L  H  D  V  E  :  N  G  K  L  L  R  N  I  K  S  H  S  A  D  V  V  C  L  H  W  E  E  D  G  K  K  :  D  M  N  S  N  T  S  S  Y  E  D  R  T  S  R  F  F  P  P  P  P  R  V  P  K  M  P  G  L  V  P  G  D  S  G  F  M  D  D  G  E  D  S  F  Q  E  L  S  N  S  S  H  Q  R  Y  N  I  L  C  S  G  D  K  D  G  S  I  C  F  N  I  F  G  I  F  P  I  G  T  V  :  N  I  H  N  L  V  V  S  S  S  L  S  S  S  N  V  A  S  R  L  L  N  A  S  I  C  K  :  V  A  L  S  K  D  L  C  H  L  V  V  L  C  N  G  E  L  I  T  D  E  V  D  Q  G  E  G  H  H  G  L  L  G  F  H  C  L  V  L  N  T  S  I  F  S  K  R :   K  T  E  L  H  Q  V  A  Q  Q  A  S  N  I  E  D  L  S  E  V  I  R  T  S  L  S  V  M  S  K  I  W  S  D  A  M  H  T  F  H  E  K  F  N  A  V  S  T  L  I  A  D  H   : G  L  D  S  T  P  Q  D  E  F  L </first_frame>
            <second_frame>  E  R  T  *  L  P  Y  V  G  V  L  M  G  K  Q  L  Q  L  G  L  K  M  G  P  S  P  C  M  M  *  K :   M  E  S  C  C  E  T  *  N  P  T  R  L  M  S  C  V  S  I  G  R  R  M  G  R  R :   T  *  T  V  I  P  P  V  M  K  I  E  L  H  G  S  F  L  L  P  L  E  F  L  R  C  L  D  L  Y  L  G  I  V  A  S  W  M  M  E  R  I  L  S  R  S  Y  Q  I  L  H  I  K  D  I  T  F  Y  V  A  G  T  R  M  E  V  S  A  S  I  S  L  A  Y  F  Q  *  G  Q  L :   I  Y  T  T  L  L  S  P  V  H  S  Q  A  A  M  L  L  A  D  F  *  M  L  P  F  V  R :   W  P  C  P  K  I  F  A  I  *  *  F  C  A  M  G  S  *  S  Q  M  R  L  I  K  V  K  D  I  M  G  Y  L  A  F  T  A  *  S  S  I  L  Q  Y  F  P  K   : G  K  L  N  F  T  R  L  P  N  R  L  P  T  L  K  I  *  V  K  S  S  G  H  H  Y  Q  S  C  L  K  Y  G  P  M  L  C  I  H  F  T  R  S  S  M  L  Y  P  H  *  S  L  I  M  :  D  L  T  L  L  L  R  M  S  F   </second_frame>
            <third_frame>   K  E  H  N  F  H  M  L  A  S  *  W  E  S  N  C  S  W  A  *  R  W  D  H  L  L  A  *  C  R   : K  W  K  A  A  A  K  H  K  I  P  L  G  *  C  R  V  S  P  L  G  G  G  W  E  E   : G  H  E  Q  *  Y  L  Q  L  *  R  S  N  F  T  V  L  S  S  S  P  *  S  S  *  D  A  W  T  C  T  W  G  *  W  L  H  G  *  W  R  G  F  F  P  G  A  I  K  F  F  T  S  K  I  *  H  F  M  *  R  G  Q  G  W  K  Y  L  L  Q  Y  L  W  H  I  S  N  R  D  S   : *  Y  T  Q  P  C  C  L  Q  F  T  L  K  Q  Q  C  C  *  P  T  S  E  C  F  H  L  *   : G  G  L  V  Q  R  S  L  P  F  S  S  F  V  Q  W  G  A  D  H  R  *  G  *  S  R  *  R  T  S  W  V  T  W  L  S  L  L  S  P  Q  Y  F  N  I  F  Q  K  :  E  N  *  T  S  P  G  C  P  T  G  F  Q  H  *  R  S  E  *  S  H  P  D  I  T  I  S  H  V  *  N  M  V  R  C  Y  A  Y  I  S  R  E  V  Q  C  C  I  H  I  D  R  *  S  W :   T  *  L  Y  S  S  G  *  V  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="95792" stop="95700"/>
                    <exon start="94807" stop="94730"/>
                    <exon start="93985" stop="93746"/>
                    <exon start="93616" stop="93536"/>
                    <exon start="93083" stop="92941"/>
                    <exon start="90769" stop="90609"/>
                    <exon start="90521" stop="90490"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>828</number_coding_nucleotides>
                  <number_encoded_amino_acids>276</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GKNITSICWRPDGKAIAVGLEDGTISLHDVENGKLLRNIKSHSADVVCLHWEEDGKKDMNSNTSSYEDRTSRFFPPPPRVPKMPGLVPGDSGFMDDGEDSFQELSNSSHQRYNILCSGDKDGSICFNIFGIFPIGTVNIHNLVVSSSLSSSNVASRLLNASICKVALSKDLCHLVVLCNGELITDEVDQGEGHHGLLGFHCLVLNTSIFSKRKTELHQVAQQASNIEDLSEVIRTSLSVMSKIWSDAMHTFHEKFNAVSTLIADHGLDSTPQDEFL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="104212" PGL_stop="97452"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="104212" e_stop="104074"/>
            <exon e_start="102868" e_stop="102808"/>
            <exon e_start="101163" e_stop="101045"/>
            <exon e_start="98824" e_stop="98691"/>
            <exon e_start="98551" e_stop="98401"/>
            <exon e_start="98306" e_stop="98147"/>
            <exon e_start="98071" e_stop="97615"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.844" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.949" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.296" e_score="1.000"/>
          <exon-intron don_prob="0.802" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="104212" e_stop="104074" e_length="139"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.981">
            <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102868" e_stop="102808" e_length="61"/>
          </exon>
          <intron i_serial="2" don_prob="0.844" acc_prob="0.953">
            <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="101163" e_stop="101045" e_length="119"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.984">
            <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="98824" e_stop="98691" e_length="134"/>
          </exon>
          <intron i_serial="4" don_prob="0.973" acc_prob="0.949">
            <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="98551" e_stop="98401" e_length="151"/>
          </exon>
          <intron i_serial="5" don_prob="0.989" acc_prob="0.296">
            <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="98306" e_stop="98147" e_length="160"/>
          </exon>
          <intron i_serial="6" don_prob="0.802" acc_prob="1.000">
            <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="98071" e_stop="97615" e_length="457"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104212" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262485" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104212" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262085" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104194" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97615"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104190" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246132" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104189" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98291"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246339" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104189" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98420"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104187" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98301"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272791" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104178" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97989"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262473" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104178" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98462"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104177" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104177" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98170"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316318" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104177" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104175" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97980"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729548" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104173" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98413"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245532" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104172" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260922" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104169" stop="104074"/>
              <exon start="102868" stop="102808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261316" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104165" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98423"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271454" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104165" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98509"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228171" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104165" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98729"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201767" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104163" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98733"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244849" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104157" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98731"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104152" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97990"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263068" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104152" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275174" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104151" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308097" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104150" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98424"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104149" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98287"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213049" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104123" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214856" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97958"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604069" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97989"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102865" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211081" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237885" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235548" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98797"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102863" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97882"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102861" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98742"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102858" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97939"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377234" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233029" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698728" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101134" stop="101045"/>
              <exon start="98824" stop="98699"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101104" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="98001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235625" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101104" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="98044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233696" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101104" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98291"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101067" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244451" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202081" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98734" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348279" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98536" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97789"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243540" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98536" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98528" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97816"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98528" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236250" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98516" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97643"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E600650" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98444" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377233" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98435" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98421" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397973" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98194" stop="98147"/>
              <exon start="98071" stop="97617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98154" stop="98147"/>
              <exon start="98071" stop="97619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98071" stop="97630"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616839" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97826" stop="97619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E613109" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGACTGCTTGTTTTTCTTTCTCCATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT : ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG : AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG : GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG : GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG : AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG : GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCATAT</gDNA_template>
            <first_frame> *  L  L  V  F  L  S  P  S  W  T  A  *  A  K  G  I  L  V  I  R  N  A  A  S  H  S  A  I  A  *  P  F  F  I  R  F  V  H  L  W  L  S  L  F  P   : Y  T  R  T  *  Q  V  F  V  D  G  R  E  L  T  G  D  G  G  L  G :   G  Y  T  S  S  R  S  T  *  E  G  S  A  N  K  *  M  G  *  *  R  C  R  *  *  *  C  K  R  I  L  G  R  *  R  G  A  C  S   : G  T  *  T  R  T  S  C  *  E  G  P  Q  E  V  C  C  K  G  W  *  K  E  R  Q  G  S  S  Y  *  *  R  A  S  R  S  S  S  R  K  T  S  P  A  K  :  A  C  R  R  S  *  L  *  V  H  G  *  I  V  C  Q  E  R  W  *  *  Q  D  P  R  K  F  Y  P  K  K  *  E  *  L  L  G  I  C  *  A  D  I  S  *  A  A  T  V  *   : E  K  L  P  L  H  W  V  A  Q  G  C  Y  E  I  V  D  D  L  V  E  R  A  R  C  *  R  H  W  F  F  Y  Y  C  I  C  K  *  E  D  *  S  R  K  G  S  H  C  E  *  K  E  D  R :   C  K  E  E  A  A  T  C  *  *  G  R  *  *  C  S  S  K  C  I  *  W  L  *  *  L  *  F  H  V  K  R  G  K  L  S  K  D  R  H  V  R  P  F  F  S  P  F  *  L  H  Q  S  G  D  L  L  N  L  L  V  T  T  T  R  K  I  L  G  P  C  Y  L  P  I  L  E  S  Y  *  V  C  H  I  F  F  F  L  F  R  R  V  K  *  E  S  I  L  C  F  V  Y  I  L  W  S  V  T  G  W  R  S  V  G  K  *  F  V  G  *  S  A  F  S  C  M  I  Q  I  S  D  F  G  P  I  D  F  M  *  L  S  Y  S  K  L  F  D  P  F  F  S  Y </first_frame>
            <second_frame>  D  C  L  F  F  F  L  H  L  G  L  L  E  P  R  A  F  W  S  S  E  T  L  L  H  I  L  L  L  L  N  H  F  S  S  D  L  F  T  S  G  Y  L  S  S  H  :  I  L  E  L  N  K  F  L  W  T  E  E  N  *  L  E  M  E  D  W   : E  D  I  P  V  P  D  L  L  K  K  D  Q  P  T  S  K  W  D  D  E  D  A  D  D  D  D  V  K  E  S  W  E  D  E  E  E  P  A  P  :  A  P  K  P  E  P  P  A  E  K  A  P  K  K  S  A  A  K  A  G  E  K  K  G  K  E  V  H  T  N  E  E  P  L  D  P  V  A  E  K  L  R  Q  Q  R :   L  V  E  E  A  D  Y  K  S  T  A  E  L  F  A  K  K  G  G  D  D  K  T  L  E  N  F  I  P  K  S  E  S  D  F  L  E  Y  A  E  L  I  S  H  K  L  R  P  F  E  :  K  S  Y  H  Y  I  G  L  L  K  A  V  M  R  L  S  M  T  S  L  K  G  Q  D  A  K  D  I  G  S  S  I  T  A  F  A  N  E  K  I  K  A  E  K  E  A  T  A  S  K  K  K  T   : G  A  K  K  K  Q  L  H  V  D  K  A  D  D  D  A  V  V  N  A  Y  D  G  Y  D  D  Y  D  F  M  *  R  G  G  N  L  A  K  T  G  M  L  G  R  F  F  H  L  S  S  Y  I  S  L  E  I  F  *  I  Y  *  *  Q  L  R  G  R  S  W  G  H  V  T  S  L  F  W  S  L  I  E  C  V  I  S  F  S  F  C  S  V  G  S  N  K  K  V  S  F  V  L  F  T  F  C  G  Q  L  L  V  G  D  P  L  V  N  D  L  S  V  D  L  H  S  L  V  *  F  R  S  Q  I  L  D  L  *  I  S  C  N  C  L  I  Q  N  Y  L  I  L  S  F  H   </second_frame>
            <third_frame>   T  A  C  F  S  F  S  I  L  D  C  L  S  Q  G  H  F  G  H  Q  K  R  C  F  T  F  C  Y  C  L  T  I  F  H  Q  I  C  S  P  L  V  I  S  L  P  I :   Y  S  N  L  T  S  F  C  G  R  K  R  I  N  W  R  W  R  I  G  :  R  I  Y  Q  F  Q  I  Y  L  R  R  I  S  Q  Q  V  N  G  M  M  K  M  Q  M  M  M  M  *  K  N  L  G  K  M  K  R  S  L  L  R :   H  L  N  Q  N  L  L  L  R  R  P  P  R  S  L  L  Q  R  L  V  K  R  K  A  R  K  F  I  L  M  K  S  L  *  I  Q  *  Q  K  N  F  A  S  K   : G  L  *  K  K  L  I  I  S  P  R  L  N  C  L  P  R  K  V  V  M  T  R  P  *  K  I  L  S  Q  K  V  R  V  T  S  W  N  M  L  S  *  Y  L  I  S  C  D  R  L  R :   K  A  T  T  T  L  G  C  S  R  L  L  *  D  C  R  *  P  R  *  K  G  K  M  L  K  T  L  V  L  L  L  L  H  L  Q  M  R  R  L  K  Q  K  R  K  P  L  R  V  K  R  R  Q  :  V  Q  R  R  S  S  Y  M  L  I  R  Q  M  M  M  Q  *  *  M  H  M  M  V  M  M  I  M  I  S  C  E  E  G  E  T  *  Q  R  Q  A  C  *  A  V  F  F  T  F  L  A  T  S  V  W  R  S  F  E  S  T  S  D  N  Y  E  E  D  L  G  A  M  L  P  P  Y  S  G  V  L  L  S  V  S  Y  L  F  L  S  V  P  S  G  Q  I  R  K  Y  P  L  F  C  L  H  F  V  V  S  Y  W  L  E  I  R  W  *  M  I  C  R  L  I  C  I  L  L  Y  D  S  D  L  R  F  W  T  Y  R  F  H  V  T  V  L  F  K  T  I  *  S  F  L  F  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102826" stop="102808"/>
                    <exon start="101163" stop="101045"/>
                    <exon start="98824" stop="98691"/>
                    <exon start="98551" stop="98401"/>
                    <exon start="98306" stop="98147"/>
                    <exon start="98071" stop="97980"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>672</number_coding_nucleotides>
                  <number_encoded_amino_acids>224</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LEMEDWEDIPVPDLLKKDQPTSKWDDEDADDDDVKESWEDEEEPAPAPKPEPPAEKAPKKSAAKAGEKKGKEVHTNEEPLDPVAEKLRQQRLVEEADYKSTAELFAKKGGDDKTLENFIPKSESDFLEYAELISHKLRPFEKSYHYIGLLKAVMRLSMTSLKGQDAKDIGSSITAFANEKIKAEKEATASKKKTGAKKKQLHVDKADDDAVVNAYDGYDDYDFM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97945" stop="97727"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AVFFTFLATSVWRSFESTSDNYEEDLGAMLPPYSGVLLSVSYLFLSVPSGQIRKYPLFCLHFVVSYWLEIRW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="104212" e_stop="104074"/>
            <exon e_start="102868" e_stop="102808"/>
            <exon e_start="101163" e_stop="101045"/>
            <exon e_start="98824" e_stop="98691"/>
            <exon e_start="98551" e_stop="98401"/>
            <exon e_start="98306" e_stop="98147"/>
            <exon e_start="98071" e_stop="97617"/>
            <exon e_start="97456" e_stop="97452"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.844" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.949" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.296" e_score="1.000"/>
          <exon-intron don_prob="0.802" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.961" e_score="1.000"/>
          <exon-only e_score="0.800"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="104212" e_stop="104074" e_length="139"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.981">
            <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102868" e_stop="102808" e_length="61"/>
          </exon>
          <intron i_serial="2" don_prob="0.844" acc_prob="0.953">
            <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="101163" e_stop="101045" e_length="119"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.984">
            <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="98824" e_stop="98691" e_length="134"/>
          </exon>
          <intron i_serial="4" don_prob="0.973" acc_prob="0.949">
            <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="98551" e_stop="98401" e_length="151"/>
          </exon>
          <intron i_serial="5" don_prob="0.989" acc_prob="0.296">
            <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="98306" e_stop="98147" e_length="160"/>
          </exon>
          <intron i_serial="6" don_prob="0.802" acc_prob="1.000">
            <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="98071" e_stop="97617" e_length="455"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.961">
            <gDNA_intron_boundary i_start="97616" i_stop="97457" i_length="160"/>
          </intron>
          <exon e_serial="8" e_score="0.800">
            <gDNA_exon_boundary e_start="97456" e_stop="97452" e_length="5"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104212" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262485" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104212" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262085" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104190" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246132" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104189" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98291"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246339" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104189" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98420"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104187" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98301"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272791" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104178" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97989"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262473" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104178" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98462"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104177" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104177" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98170"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316318" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104177" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104175" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97980"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729548" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104173" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98413"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245532" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104172" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260922" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104169" stop="104074"/>
              <exon start="102868" stop="102808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261316" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104165" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98423"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271454" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104165" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98509"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228171" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104165" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98729"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201767" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104163" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98733"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244849" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104157" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98731"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104152" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97990"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263068" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104152" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275174" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104151" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308097" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104150" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98424"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104149" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98287"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213049" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104123" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214856" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97958"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604069" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97989"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102865" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211081" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237885" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235548" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98797"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102863" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97882"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102861" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98742"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102858" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97939"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377234" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233029" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698728" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101134" stop="101045"/>
              <exon start="98824" stop="98699"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101104" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="98001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235625" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101104" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="98044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233696" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101104" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98291"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101067" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244451" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202081" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98734" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348279" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98536" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97789"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243540" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98536" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98528" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97816"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98528" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236250" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98516" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97643"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E600650" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98444" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377233" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98435" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98421" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397973" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98194" stop="98147"/>
              <exon start="98071" stop="97617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98154" stop="98147"/>
              <exon start="98071" stop="97619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98071" stop="97630"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616839" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97995" stop="97617"/>
              <exon start="97456" stop="97452"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616578" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97826" stop="97619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E613109" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGACTGCTTGTTTTTCTTTCTCCATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT : ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG : AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG : GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG : GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG : AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG : GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCAT : CCTTT</gDNA_template>
            <first_frame> *  L  L  V  F  L  S  P  S  W  T  A  *  A  K  G  I  L  V  I  R  N  A  A  S  H  S  A  I  A  *  P  F  F  I  R  F  V  H  L  W  L  S  L  F  P   : Y  T  R  T  *  Q  V  F  V  D  G  R  E  L  T  G  D  G  G  L  G :   G  Y  T  S  S  R  S  T  *  E  G  S  A  N  K  *  M  G  *  *  R  C  R  *  *  *  C  K  R  I  L  G  R  *  R  G  A  C  S   : G  T  *  T  R  T  S  C  *  E  G  P  Q  E  V  C  C  K  G  W  *  K  E  R  Q  G  S  S  Y  *  *  R  A  S  R  S  S  S  R  K  T  S  P  A  K  :  A  C  R  R  S  *  L  *  V  H  G  *  I  V  C  Q  E  R  W  *  *  Q  D  P  R  K  F  Y  P  K  K  *  E  *  L  L  G  I  C  *  A  D  I  S  *  A  A  T  V  *   : E  K  L  P  L  H  W  V  A  Q  G  C  Y  E  I  V  D  D  L  V  E  R  A  R  C  *  R  H  W  F  F  Y  Y  C  I  C  K  *  E  D  *  S  R  K  G  S  H  C  E  *  K  E  D  R :   C  K  E  E  A  A  T  C  *  *  G  R  *  *  C  S  S  K  C  I  *  W  L  *  *  L  *  F  H  V  K  R  G  K  L  S  K  D  R  H  V  R  P  F  F  S  P  F  *  L  H  Q  S  G  D  L  L  N  L  L  V  T  T  T  R  K  I  L  G  P  C  Y  L  P  I  L  E  S  Y  *  V  C  H  I  F  F  F  L  F  R  R  V  K  *  E  S  I  L  C  F  V  Y  I  L  W  S  V  T  G  W  R  S  V  G  K  *  F  V  G  *  S  A  F  S  C  M  I  Q  I  S  D  F  G  P  I  D  F  M  *  L  S  Y  S  K  L  F  D  P  F  F  S   : S  F </first_frame>
            <second_frame>  D  C  L  F  F  F  L  H  L  G  L  L  E  P  R  A  F  W  S  S  E  T  L  L  H  I  L  L  L  L  N  H  F  S  S  D  L  F  T  S  G  Y  L  S  S  H  :  I  L  E  L  N  K  F  L  W  T  E  E  N  *  L  E  M  E  D  W   : E  D  I  P  V  P  D  L  L  K  K  D  Q  P  T  S  K  W  D  D  E  D  A  D  D  D  D  V  K  E  S  W  E  D  E  E  E  P  A  P  :  A  P  K  P  E  P  P  A  E  K  A  P  K  K  S  A  A  K  A  G  E  K  K  G  K  E  V  H  T  N  E  E  P  L  D  P  V  A  E  K  L  R  Q  Q  R :   L  V  E  E  A  D  Y  K  S  T  A  E  L  F  A  K  K  G  G  D  D  K  T  L  E  N  F  I  P  K  S  E  S  D  F  L  E  Y  A  E  L  I  S  H  K  L  R  P  F  E  :  K  S  Y  H  Y  I  G  L  L  K  A  V  M  R  L  S  M  T  S  L  K  G  Q  D  A  K  D  I  G  S  S  I  T  A  F  A  N  E  K  I  K  A  E  K  E  A  T  A  S  K  K  K  T   : G  A  K  K  K  Q  L  H  V  D  K  A  D  D  D  A  V  V  N  A  Y  D  G  Y  D  D  Y  D  F  M  *  R  G  G  N  L  A  K  T  G  M  L  G  R  F  F  H  L  S  S  Y  I  S  L  E  I  F  *  I  Y  *  *  Q  L  R  G  R  S  W  G  H  V  T  S  L  F  W  S  L  I  E  C  V  I  S  F  S  F  C  S  V  G  S  N  K  K  V  S  F  V  L  F  T  F  C  G  Q  L  L  V  G  D  P  L  V  N  D  L  S  V  D  L  H  S  L  V  *  F  R  S  Q  I  L  D  L  *  I  S  C  N  C  L  I  Q  N  Y  L  I  L  S  F  H  :  P   </second_frame>
            <third_frame>   T  A  C  F  S  F  S  I  L  D  C  L  S  Q  G  H  F  G  H  Q  K  R  C  F  T  F  C  Y  C  L  T  I  F  H  Q  I  C  S  P  L  V  I  S  L  P  I :   Y  S  N  L  T  S  F  C  G  R  K  R  I  N  W  R  W  R  I  G  :  R  I  Y  Q  F  Q  I  Y  L  R  R  I  S  Q  Q  V  N  G  M  M  K  M  Q  M  M  M  M  *  K  N  L  G  K  M  K  R  S  L  L  R :   H  L  N  Q  N  L  L  L  R  R  P  P  R  S  L  L  Q  R  L  V  K  R  K  A  R  K  F  I  L  M  K  S  L  *  I  Q  *  Q  K  N  F  A  S  K   : G  L  *  K  K  L  I  I  S  P  R  L  N  C  L  P  R  K  V  V  M  T  R  P  *  K  I  L  S  Q  K  V  R  V  T  S  W  N  M  L  S  *  Y  L  I  S  C  D  R  L  R :   K  A  T  T  T  L  G  C  S  R  L  L  *  D  C  R  *  P  R  *  K  G  K  M  L  K  T  L  V  L  L  L  L  H  L  Q  M  R  R  L  K  Q  K  R  K  P  L  R  V  K  R  R  Q  :  V  Q  R  R  S  S  Y  M  L  I  R  Q  M  M  M  Q  *  *  M  H  M  M  V  M  M  I  M  I  S  C  E  E  G  E  T  *  Q  R  Q  A  C  *  A  V  F  F  T  F  L  A  T  S  V  W  R  S  F  E  S  T  S  D  N  Y  E  E  D  L  G  A  M  L  P  P  Y  S  G  V  L  L  S  V  S  Y  L  F  L  S  V  P  S  G  Q  I  R  K  Y  P  L  F  C  L  H  F  V  V  S  Y  W  L  E  I  R  W  *  M  I  C  R  L  I  C  I  L  L  Y  D  S  D  L  R  F  W  T  Y  R  F  H  V  T  V  L  F  K  T  I  *  S  F  L  F  I :   L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102826" stop="102808"/>
                    <exon start="101163" stop="101045"/>
                    <exon start="98824" stop="98691"/>
                    <exon start="98551" stop="98401"/>
                    <exon start="98306" stop="98147"/>
                    <exon start="98071" stop="97980"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>672</number_coding_nucleotides>
                  <number_encoded_amino_acids>224</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LEMEDWEDIPVPDLLKKDQPTSKWDDEDADDDDVKESWEDEEEPAPAPKPEPPAEKAPKKSAAKAGEKKGKEVHTNEEPLDPVAEKLRQQRLVEEADYKSTAELFAKKGGDDKTLENFIPKSESDFLEYAELISHKLRPFEKSYHYIGLLKAVMRLSMTSLKGQDAKDIGSSITAFANEKIKAEKEATASKKKTGAKKKQLHVDKADDDAVVNAYDGYDDYDFM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97945" stop="97727"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AVFFTFLATSVWRSFESTSDNYEEDLGAMLPPYSGVLLSVSYLFLSVPSGQIRKYPLFCLHFVVSYWLEIRW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="104212" e_stop="104074"/>
            <exon e_start="102868" e_stop="102808"/>
            <exon e_start="101163" e_stop="101045"/>
            <exon e_start="98824" e_stop="98691"/>
            <exon e_start="98551" e_stop="98401"/>
            <exon e_start="98306" e_stop="98147"/>
            <exon e_start="98071" e_stop="97617"/>
            <exon e_start="97564" e_stop="97549"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.844" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.949" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.296" e_score="1.000"/>
          <exon-intron don_prob="0.802" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.678" e_score="1.000"/>
          <exon-only e_score="0.438"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="104212" e_stop="104074" e_length="139"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.981">
            <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102868" e_stop="102808" e_length="61"/>
          </exon>
          <intron i_serial="2" don_prob="0.844" acc_prob="0.953">
            <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="101163" e_stop="101045" e_length="119"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.984">
            <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="98824" e_stop="98691" e_length="134"/>
          </exon>
          <intron i_serial="4" don_prob="0.973" acc_prob="0.949">
            <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="98551" e_stop="98401" e_length="151"/>
          </exon>
          <intron i_serial="5" don_prob="0.989" acc_prob="0.296">
            <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="98306" e_stop="98147" e_length="160"/>
          </exon>
          <intron i_serial="6" don_prob="0.802" acc_prob="1.000">
            <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="98071" e_stop="97617" e_length="455"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.678">
            <gDNA_intron_boundary i_start="97616" i_stop="97565" i_length="52"/>
          </intron>
          <exon e_serial="8" e_score="0.438">
            <gDNA_exon_boundary e_start="97564" e_stop="97549" e_length="16"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104212" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98290"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262485" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104212" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98702"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262085" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104190" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246132" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104189" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98291"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246339" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104189" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98420"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104187" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98301"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272791" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104178" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97989"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262473" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104178" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98462"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104177" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104177" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98170"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316318" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104177" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104175" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97980"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729548" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104173" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98413"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245532" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104172" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98192"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E260922" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104169" stop="104074"/>
              <exon start="102868" stop="102808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261316" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104165" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98423"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E271454" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104165" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98509"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228171" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104165" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98729"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201767" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104163" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98733"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244849" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104157" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98731"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E354699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104152" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97990"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263068" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104152" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E275174" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104151" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308097" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104150" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98424"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104149" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98287"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213049" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104123" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214856" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97958"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604069" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97989"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102865" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211081" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237885" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235548" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98797"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102863" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97882"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102861" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98742"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102858" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97939"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377234" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233029" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698728" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101134" stop="101045"/>
              <exon start="98824" stop="98699"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101104" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="98001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235625" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101104" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="98044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233696" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101104" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98291"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101067" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244451" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202081" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98734" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348279" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98536" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97789"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243540" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98536" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98528" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97816"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98528" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236250" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98516" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97643"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E600650" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98444" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377233" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98435" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98421" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397973" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98257" stop="98147"/>
              <exon start="98071" stop="97617"/>
              <exon start="97564" stop="97549"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E619621" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98194" stop="98147"/>
              <exon start="98071" stop="97617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98154" stop="98147"/>
              <exon start="98071" stop="97619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98071" stop="97630"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616839" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97826" stop="97619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E613109" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGACTGCTTGTTTTTCTTTCTCCATCTTGGACTGCTTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT : ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG : AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG : GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG : GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG : AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG : GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCAT : TTAGTAATTCTTAAAA</gDNA_template>
            <first_frame> *  L  L  V  F  L  S  P  S  W  T  A  *  A  K  G  I  L  V  I  R  N  A  A  S  H  S  A  I  A  *  P  F  F  I  R  F  V  H  L  W  L  S  L  F  P   : Y  T  R  T  *  Q  V  F  V  D  G  R  E  L  T  G  D  G  G  L  G :   G  Y  T  S  S  R  S  T  *  E  G  S  A  N  K  *  M  G  *  *  R  C  R  *  *  *  C  K  R  I  L  G  R  *  R  G  A  C  S   : G  T  *  T  R  T  S  C  *  E  G  P  Q  E  V  C  C  K  G  W  *  K  E  R  Q  G  S  S  Y  *  *  R  A  S  R  S  S  S  R  K  T  S  P  A  K  :  A  C  R  R  S  *  L  *  V  H  G  *  I  V  C  Q  E  R  W  *  *  Q  D  P  R  K  F  Y  P  K  K  *  E  *  L  L  G  I  C  *  A  D  I  S  *  A  A  T  V  *   : E  K  L  P  L  H  W  V  A  Q  G  C  Y  E  I  V  D  D  L  V  E  R  A  R  C  *  R  H  W  F  F  Y  Y  C  I  C  K  *  E  D  *  S  R  K  G  S  H  C  E  *  K  E  D  R :   C  K  E  E  A  A  T  C  *  *  G  R  *  *  C  S  S  K  C  I  *  W  L  *  *  L  *  F  H  V  K  R  G  K  L  S  K  D  R  H  V  R  P  F  F  S  P  F  *  L  H  Q  S  G  D  L  L  N  L  L  V  T  T  T  R  K  I  L  G  P  C  Y  L  P  I  L  E  S  Y  *  V  C  H  I  F  F  F  L  F  R  R  V  K  *  E  S  I  L  C  F  V  Y  I  L  W  S  V  T  G  W  R  S  V  G  K  *  F  V  G  *  S  A  F  S  C  M  I  Q  I  S  D  F  G  P  I  D  F  M  *  L  S  Y  S  K  L  F  D  P  F  F  S   : F  S  N  S  *   </first_frame>
            <second_frame>  D  C  L  F  F  F  L  H  L  G  L  L  E  P  R  A  F  W  S  S  E  T  L  L  H  I  L  L  L  L  N  H  F  S  S  D  L  F  T  S  G  Y  L  S  S  H  :  I  L  E  L  N  K  F  L  W  T  E  E  N  *  L  E  M  E  D  W   : E  D  I  P  V  P  D  L  L  K  K  D  Q  P  T  S  K  W  D  D  E  D  A  D  D  D  D  V  K  E  S  W  E  D  E  E  E  P  A  P  :  A  P  K  P  E  P  P  A  E  K  A  P  K  K  S  A  A  K  A  G  E  K  K  G  K  E  V  H  T  N  E  E  P  L  D  P  V  A  E  K  L  R  Q  Q  R :   L  V  E  E  A  D  Y  K  S  T  A  E  L  F  A  K  K  G  G  D  D  K  T  L  E  N  F  I  P  K  S  E  S  D  F  L  E  Y  A  E  L  I  S  H  K  L  R  P  F  E  :  K  S  Y  H  Y  I  G  L  L  K  A  V  M  R  L  S  M  T  S  L  K  G  Q  D  A  K  D  I  G  S  S  I  T  A  F  A  N  E  K  I  K  A  E  K  E  A  T  A  S  K  K  K  T   : G  A  K  K  K  Q  L  H  V  D  K  A  D  D  D  A  V  V  N  A  Y  D  G  Y  D  D  Y  D  F  M  *  R  G  G  N  L  A  K  T  G  M  L  G  R  F  F  H  L  S  S  Y  I  S  L  E  I  F  *  I  Y  *  *  Q  L  R  G  R  S  W  G  H  V  T  S  L  F  W  S  L  I  E  C  V  I  S  F  S  F  C  S  V  G  S  N  K  K  V  S  F  V  L  F  T  F  C  G  Q  L  L  V  G  D  P  L  V  N  D  L  S  V  D  L  H  S  L  V  *  F  R  S  Q  I  L  D  L  *  I  S  C  N  C  L  I  Q  N  Y  L  I  L  S  F  H  :  L  V  I  L  K  </second_frame>
            <third_frame>   T  A  C  F  S  F  S  I  L  D  C  L  S  Q  G  H  F  G  H  Q  K  R  C  F  T  F  C  Y  C  L  T  I  F  H  Q  I  C  S  P  L  V  I  S  L  P  I :   Y  S  N  L  T  S  F  C  G  R  K  R  I  N  W  R  W  R  I  G  :  R  I  Y  Q  F  Q  I  Y  L  R  R  I  S  Q  Q  V  N  G  M  M  K  M  Q  M  M  M  M  *  K  N  L  G  K  M  K  R  S  L  L  R :   H  L  N  Q  N  L  L  L  R  R  P  P  R  S  L  L  Q  R  L  V  K  R  K  A  R  K  F  I  L  M  K  S  L  *  I  Q  *  Q  K  N  F  A  S  K   : G  L  *  K  K  L  I  I  S  P  R  L  N  C  L  P  R  K  V  V  M  T  R  P  *  K  I  L  S  Q  K  V  R  V  T  S  W  N  M  L  S  *  Y  L  I  S  C  D  R  L  R :   K  A  T  T  T  L  G  C  S  R  L  L  *  D  C  R  *  P  R  *  K  G  K  M  L  K  T  L  V  L  L  L  L  H  L  Q  M  R  R  L  K  Q  K  R  K  P  L  R  V  K  R  R  Q  :  V  Q  R  R  S  S  Y  M  L  I  R  Q  M  M  M  Q  *  *  M  H  M  M  V  M  M  I  M  I  S  C  E  E  G  E  T  *  Q  R  Q  A  C  *  A  V  F  F  T  F  L  A  T  S  V  W  R  S  F  E  S  T  S  D  N  Y  E  E  D  L  G  A  M  L  P  P  Y  S  G  V  L  L  S  V  S  Y  L  F  L  S  V  P  S  G  Q  I  R  K  Y  P  L  F  C  L  H  F  V  V  S  Y  W  L  E  I  R  W  *  M  I  C  R  L  I  C  I  L  L  Y  D  S  D  L  R  F  W  T  Y  R  F  H  V  T  V  L  F  K  T  I  *  S  F  L  F  I :   *  *  F  L  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102826" stop="102808"/>
                    <exon start="101163" stop="101045"/>
                    <exon start="98824" stop="98691"/>
                    <exon start="98551" stop="98401"/>
                    <exon start="98306" stop="98147"/>
                    <exon start="98071" stop="97980"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>672</number_coding_nucleotides>
                  <number_encoded_amino_acids>224</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LEMEDWEDIPVPDLLKKDQPTSKWDDEDADDDDVKESWEDEEEPAPAPKPEPPAEKAPKKSAAKAGEKKGKEVHTNEEPLDPVAEKLRQQRLVEEADYKSTAELFAKKGGDDKTLENFIPKSESDFLEYAELISHKLRPFEKSYHYIGLLKAVMRLSMTSLKGQDAKDIGSSITAFANEKIKAEKEATASKKKTGAKKKQLHVDKADDDAVVNAYDGYDDYDFM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97945" stop="97727"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AVFFTFLATSVWRSFESTSDNYEEDLGAMLPPYSGVLLSVSYLFLSVPSGQIRKYPLFCLHFVVSYWLEIRW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="102888" e_stop="102808"/>
            <exon e_start="101163" e_stop="101045"/>
            <exon e_start="98824" e_stop="98691"/>
            <exon e_start="98551" e_stop="98401"/>
            <exon e_start="98306" e_stop="98147"/>
            <exon e_start="98071" e_stop="97617"/>
            <exon e_start="97564" e_stop="97549"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.844" acc_prob="0.953" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.949" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.296" e_score="1.000"/>
          <exon-intron don_prob="0.802" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.678" e_score="1.000"/>
          <exon-only e_score="0.438"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="102888" e_stop="102808" e_length="81"/>
          </exon>
          <intron i_serial="1" don_prob="0.844" acc_prob="0.953">
            <gDNA_intron_boundary i_start="102807" i_stop="101164" i_length="1644"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="101163" e_stop="101045" e_length="119"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.984">
            <gDNA_intron_boundary i_start="101044" i_stop="98825" i_length="2220"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="98824" e_stop="98691" e_length="134"/>
          </exon>
          <intron i_serial="3" don_prob="0.973" acc_prob="0.949">
            <gDNA_intron_boundary i_start="98690" i_stop="98552" i_length="139"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="98551" e_stop="98401" e_length="151"/>
          </exon>
          <intron i_serial="4" don_prob="0.989" acc_prob="0.296">
            <gDNA_intron_boundary i_start="98400" i_stop="98307" i_length="94"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="98306" e_stop="98147" e_length="160"/>
          </exon>
          <intron i_serial="5" don_prob="0.802" acc_prob="1.000">
            <gDNA_intron_boundary i_start="98146" i_stop="98072" i_length="75"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="98071" e_stop="97617" e_length="455"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.678">
            <gDNA_intron_boundary i_start="97616" i_stop="97565" i_length="52"/>
          </intron>
          <exon e_serial="7" e_score="0.438">
            <gDNA_exon_boundary e_start="97564" e_stop="97549" e_length="16"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102888" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98233"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E447173" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97958"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604069" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97989"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102868" stop="102808"/>
              <exon start="101163" stop="101061"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102865" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97987"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211081" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98193"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237885" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235548" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98279"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266378" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102864" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98797"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102863" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97882"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706795" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102861" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98742"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252481" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102858" stop="102808"/>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264948" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97939"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377234" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98188"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233029" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101163" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98201"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698728" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101134" stop="101045"/>
              <exon start="98824" stop="98699"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101104" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="98001"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235625" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101104" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="98044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E233696" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101104" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98291"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242823" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101067" stop="101045"/>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244451" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98824" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202081" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98734" stop="98691"/>
              <exon start="98551" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348279" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98536" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97789"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243540" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98536" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98528" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97816"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98528" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236250" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98516" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97643"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E600650" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98444" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E377233" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98435" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97884"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98421" stop="98401"/>
              <exon start="98306" stop="98147"/>
              <exon start="98071" stop="97617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397973" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98257" stop="98147"/>
              <exon start="98071" stop="97617"/>
              <exon start="97564" stop="97549"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E619621" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98194" stop="98147"/>
              <exon start="98071" stop="97617"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98154" stop="98147"/>
              <exon start="98071" stop="97619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E229994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98071" stop="97630"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E616839" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97826" stop="97619"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E613109" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGTCTACTGCTTATTCAGATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG : AGGATATACCAGTTCCAGATCTACTTAAGAAGGATCAGCCAACAAGTAAATGGGATGATGAAGATGCAGATGATGATGATGTAAAAGAATCTTGGGAAGATGAAGAGGAGCCTGCTCCG : GCACCTAAACCAGAACCTCCTGCTGAGAAGGCCCCCAAGAAGTCTGCTGCAAAGGCTGGTGAAAAGAAAGGCAAGGAAGTTCATACTAATGAAGAGCCTCTAGATCCAGTAGCAGAAAAACTTCGCCAGCAAAG : GCTTGTAGAAGAAGCTGATTATAAGTCCACGGCTGAATTGTTTGCCAAGAAAGGTGGTGATGACAAGACCCTAGAAAATTTTATCCCAAAAAGTGAGAGTGACTTCTTGGAATATGCTGAGCTGATATCTCATAAGCTGCGACCGTTTGAG : AAAAGCTACCACTACATTGGGTTGCTCAAGGCTGTTATGAGATTGTCGATGACCTCGTTGAAAGGGCAAGATGCTAAAGACATTGGTTCTTCTATTACTGCATTTGCAAATGAGAAGATTAAAGCAGAAAAGGAAGCCACTGCGAGTAAAAAGAAGACAG : GTGCAAAGAAGAAGCAGCTACATGTTGATAAGGCAGATGATGATGCAGTAGTAAATGCATATGATGGTTATGATGATTATGATTTCATGTGAAGAGGGGGAAACTTAGCAAAGACAGGCATGTTAGGCCGTTTTTTTCACCTTTCTAGCTACATCAGTCTGGAGATCTTTTGAATCTACTAGTGACAACTACGAGGAAGATCTTGGGGCCATGTTACCTCCCTATTCTGGAGTCTTATTGAGTGTGTCATATCTTTTTCTTTCTGTTCCGTCGGGTCAAATAAGAAAGTATCCTTTGTTTTGTTTACATTTTGTGGTCAGTTACTGGTTGGAGATCCGTTGGTAAATGATTTGTCGGTTGATCTGCATTCTCTTGTATGATTCAGATCTCAGATTTTGGACCTATAGATTTCATGTAACTGTCTTATTCAAAACTATTTGATCCTTTCTTTTCAT : TTAGTAATTCTTAAAA</gDNA_template>
            <first_frame> F  V  Y  C  L  F  R  Y  S  N  L  T  S  F  C  G  R  K  R  I  N  W  R  W  R  I  G  :  R  I  Y  Q  F  Q  I  Y  L  R  R  I  S  Q  Q  V  N  G  M  M  K  M  Q  M  M  M  M  *  K  N  L  G  K  M  K  R  S  L  L  R :   H  L  N  Q  N  L  L  L  R  R  P  P  R  S  L  L  Q  R  L  V  K  R  K  A  R  K  F  I  L  M  K  S  L  *  I  Q  *  Q  K  N  F  A  S  K   : G  L  *  K  K  L  I  I  S  P  R  L  N  C  L  P  R  K  V  V  M  T  R  P  *  K  I  L  S  Q  K  V  R  V  T  S  W  N  M  L  S  *  Y  L  I  S  C  D  R  L  R :   K  A  T  T  T  L  G  C  S  R  L  L  *  D  C  R  *  P  R  *  K  G  K  M  L  K  T  L  V  L  L  L  L  H  L  Q  M  R  R  L  K  Q  K  R  K  P  L  R  V  K  R  R  Q  :  V  Q  R  R  S  S  Y  M  L  I  R  Q  M  M  M  Q  *  *  M  H  M  M  V  M  M  I  M  I  S  C  E  E  G  E  T  *  Q  R  Q  A  C  *  A  V  F  F  T  F  L  A  T  S  V  W  R  S  F  E  S  T  S  D  N  Y  E  E  D  L  G  A  M  L  P  P  Y  S  G  V  L  L  S  V  S  Y  L  F  L  S  V  P  S  G  Q  I  R  K  Y  P  L  F  C  L  H  F  V  V  S  Y  W  L  E  I  R  W  *  M  I  C  R  L  I  C  I  L  L  Y  D  S  D  L  R  F  W  T  Y  R  F  H  V  T  V  L  F  K  T  I  *  S  F  L  F  I :   *  *  F  L  K </first_frame>
            <second_frame>  L  S  T  A  Y  S  D  T  R  T  *  Q  V  F  V  D  G  R  E  L  T  G  D  G  G  L  G :   G  Y  T  S  S  R  S  T  *  E  G  S  A  N  K  *  M  G  *  *  R  C  R  *  *  *  C  K  R  I  L  G  R  *  R  G  A  C  S   : G  T  *  T  R  T  S  C  *  E  G  P  Q  E  V  C  C  K  G  W  *  K  E  R  Q  G  S  S  Y  *  *  R  A  S  R  S  S  S  R  K  T  S  P  A  K  :  A  C  R  R  S  *  L  *  V  H  G  *  I  V  C  Q  E  R  W  *  *  Q  D  P  R  K  F  Y  P  K  K  *  E  *  L  L  G  I  C  *  A  D  I  S  *  A  A  T  V  *   : E  K  L  P  L  H  W  V  A  Q  G  C  Y  E  I  V  D  D  L  V  E  R  A  R  C  *  R  H  W  F  F  Y  Y  C  I  C  K  *  E  D  *  S  R  K  G  S  H  C  E  *  K  E  D  R :   C  K  E  E  A  A  T  C  *  *  G  R  *  *  C  S  S  K  C  I  *  W  L  *  *  L  *  F  H  V  K  R  G  K  L  S  K  D  R  H  V  R  P  F  F  S  P  F  *  L  H  Q  S  G  D  L  L  N  L  L  V  T  T  T  R  K  I  L  G  P  C  Y  L  P  I  L  E  S  Y  *  V  C  H  I  F  F  F  L  F  R  R  V  K  *  E  S  I  L  C  F  V  Y  I  L  W  S  V  T  G  W  R  S  V  G  K  *  F  V  G  *  S  A  F  S  C  M  I  Q  I  S  D  F  G  P  I  D  F  M  *  L  S  Y  S  K  L  F  D  P  F  F  S   : F  S  N  S  *   </second_frame>
            <third_frame>   C  L  L  L  I  Q  I  L  E  L  N  K  F  L  W  T  E  E  N  *  L  E  M  E  D  W   : E  D  I  P  V  P  D  L  L  K  K  D  Q  P  T  S  K  W  D  D  E  D  A  D  D  D  D  V  K  E  S  W  E  D  E  E  E  P  A  P  :  A  P  K  P  E  P  P  A  E  K  A  P  K  K  S  A  A  K  A  G  E  K  K  G  K  E  V  H  T  N  E  E  P  L  D  P  V  A  E  K  L  R  Q  Q  R :   L  V  E  E  A  D  Y  K  S  T  A  E  L  F  A  K  K  G  G  D  D  K  T  L  E  N  F  I  P  K  S  E  S  D  F  L  E  Y  A  E  L  I  S  H  K  L  R  P  F  E  :  K  S  Y  H  Y  I  G  L  L  K  A  V  M  R  L  S  M  T  S  L  K  G  Q  D  A  K  D  I  G  S  S  I  T  A  F  A  N  E  K  I  K  A  E  K  E  A  T  A  S  K  K  K  T   : G  A  K  K  K  Q  L  H  V  D  K  A  D  D  D  A  V  V  N  A  Y  D  G  Y  D  D  Y  D  F  M  *  R  G  G  N  L  A  K  T  G  M  L  G  R  F  F  H  L  S  S  Y  I  S  L  E  I  F  *  I  Y  *  *  Q  L  R  G  R  S  W  G  H  V  T  S  L  F  W  S  L  I  E  C  V  I  S  F  S  F  C  S  V  G  S  N  K  K  V  S  F  V  L  F  T  F  C  G  Q  L  L  V  G  D  P  L  V  N  D  L  S  V  D  L  H  S  L  V  *  F  R  S  Q  I  L  D  L  *  I  S  C  N  C  L  I  Q  N  Y  L  I  L  S  F  H  :  L  V  I  L  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102826" stop="102808"/>
                    <exon start="101163" stop="101045"/>
                    <exon start="98824" stop="98691"/>
                    <exon start="98551" stop="98401"/>
                    <exon start="98306" stop="98147"/>
                    <exon start="98071" stop="97980"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>672</number_coding_nucleotides>
                  <number_encoded_amino_acids>224</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LEMEDWEDIPVPDLLKKDQPTSKWDDEDADDDDVKESWEDEEEPAPAPKPEPPAEKAPKKSAAKAGEKKGKEVHTNEEPLDPVAEKLRQQRLVEEADYKSTAELFAKKGGDDKTLENFIPKSESDFLEYAELISHKLRPFEKSYHYIGLLKAVMRLSMTSLKGQDAKDIGSSITAFANEKIKAEKEATASKKKTGAKKKQLHVDKADDDAVVNAYDGYDDYDFM*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97945" stop="97727"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AVFFTFLATSVWRSFESTSDNYEEDLGAMLPPYSGVLLSVSYLFLSVPSGQIRKYPLFCLHFVVSYWLEIRW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="104177" e_stop="104074"/>
            <exon e_start="102868" e_stop="102808"/>
            <exon e_start="102078" e_stop="101289"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.981" e_score="1.000"/>
          <exon-intron don_prob="0.844" acc_prob="0.821" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="104177" e_stop="104074" e_length="104"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.981">
            <gDNA_intron_boundary i_start="104073" i_stop="102869" i_length="1205"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="102868" e_stop="102808" e_length="61"/>
          </exon>
          <intron i_serial="2" don_prob="0.844" acc_prob="0.821">
            <gDNA_intron_boundary i_start="102807" i_stop="102079" i_length="729"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="102078" e_stop="101289" e_length="790"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104177" stop="104074"/>
              <exon start="102868" stop="102808"/>
              <exon start="102078" stop="101480"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E334178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104169" stop="104074"/>
              <exon start="102868" stop="102808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261316" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102054" stop="101289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317424" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGAGCCAAGGGCATTTTGGTCATCAGAAACGCTGCTTCACATTCTGCTATTGCTTAACCATTTTTCATCAGATTTGTTCACCTCTGGTTATCTCTCTTCCCAT : ATACTCGAACTTAACAAGTTTTTGTGGACGGAAGAGAATTAACTGGAGATGGAGGATTGGG : GTGTCAAGAAGATGCAAAAGGTACAAAAGAGAGATGCATCCAAAGAAACTATATTAGATTTAGGGAGCTAAAGTCCAAAACAGACCAGTGCAATTTGAGGTGCTCCAACTAATTAACCAGGCATCTAGCTTTTGAAGAGTGGACGGATTTGAGATTCCATCAAAACATATACGGTTCTAACTGTGTAAGTACACCAAAAGATATTCACAGGGATCATAATCCGGATCTCCTCTGACTTTAAAACTTCATCAACTCCAAGATTCATAGACTTCTGTGACTCTCTGTGGTATGACCCTATTGACTTCAAAATAGAGTAGAACGATTCCTCAAGTCAGCAACAATTTTGTTTTAGCCTTATATATGCTTTGTCATCACTCACACCACAACAGGGTTTTGTGTGTGGCAGAAATGAAACGGAATAAACAATAATCTAAGAATTCATCTCACTAATCAATGGTAAGCTGCTTATGCTGTCTCTATTGTGGTAAGCGTTTAATAATACTTGCTTCTGGATTGTCTAAGTGCTCAGCCTATTCACTTGAACTCACTGGTTCATTTTTTAGCATAGCATTTACAAGAAGCAACTACCATTGTAACTGGTTGACTGTTCACAGTAATTGGAATAAAACCATAGATGTTGGTTCCCTATTTCTGGAGATTTTGCTTGTTCAAACCAGTTTATTTTTGGGTTTGATTCATTTGTCTTTCTGAGAAGACTTGGATTCCCTCTCCATGGGACATTGACATGGTTTATTGTGCATGCAGAAAAAGGGATGTACCATAATCTTAT</gDNA_template>
            <first_frame> L  S  Q  G  H  F  G  H  Q  K  R  C  F  T  F  C  Y  C  L  T  I  F  H  Q  I  C  S  P  L  V  I  S  L  P  I :   Y  S  N  L  T  S  F  C  G  R  K  R  I  N  W  R  W  R  I  G  :  V  S  R  R  C  K  R  Y  K  R  E  M  H  P  K  K  L  Y  *  I  *  G  A  K  V  Q  N  R  P  V  Q  F  E  V  L  Q  L  I  N  Q  A  S  S  F  *  R  V  D  G  F  E  I  P  S  K  H  I  R  F  *  L  C  K  Y  T  K  R  Y  S  Q  G  S  *  S  G  S  P  L  T  L  K  L  H  Q  L  Q  D  S  *  T  S  V  T  L  C  G  M  T  L  L  T  S  K  *  S  R  T  I  P  Q  V  S  N  N  F  V  L  A  L  Y  M  L  C  H  H  S  H  H  N  R  V  L  C  V  A  E  M  K  R  N  K  Q  *  S  K  N  S  S  H  *  S  M  V  S  C  L  C  C  L  Y  C  G  K  R  L  I  I  L  A  S  G  L  S  K  C  S  A  Y  S  L  E  L  T  G  S  F  F  S  I  A  F  T  R  S  N  Y  H  C  N  W  L  T  V  H  S  N  W  N  K  T  I  D  V  G  S  L  F  L  E  I  L  L  V  Q  T  S  L  F  L  G  L  I  H  L  S  F  *  E  D  L  D  S  L  S  M  G  H  *  H  G  L  L  C  M  Q  K  K  G  C  T  I  I  L  </first_frame>
            <second_frame>  *  A  K  G  I  L  V  I  R  N  A  A  S  H  S  A  I  A  *  P  F  F  I  R  F  V  H  L  W  L  S  L  F  P   : Y  T  R  T  *  Q  V  F  V  D  G  R  E  L  T  G  D  G  G  L  G :   C  Q  E  D  A  K  G  T  K  E  R  C  I  Q  R  N  Y  I  R  F  R  E  L  K  S  K  T  D  Q  C  N  L  R  C  S  N  *  L  T  R  H  L  A  F  E  E  W  T  D  L  R  F  H  Q  N  I  Y  G  S  N  C  V  S  T  P  K  D  I  H  R  D  H  N  P  D  L  L  *  L  *  N  F  I  N  S  K  I  H  R  L  L  *  L  S  V  V  *  P  Y  *  L  Q  N  R  V  E  R  F  L  K  S  A  T  I  L  F  *  P  Y  I  C  F  V  I  T  H  T  T  T  G  F  C  V  W  Q  K  *  N  G  I  N  N  N  L  R  I  H  L  T  N  Q  W  *  A  A  Y  A  V  S  I  V  V  S  V  *  *  Y  L  L  L  D  C  L  S  A  Q  P  I  H  L  N  S  L  V  H  F  L  A  *  H  L  Q  E  A  T  T  I  V  T  G  *  L  F  T  V  I  G  I  K  P  *  M  L  V  P  Y  F  W  R  F  C  L  F  K  P  V  Y  F  W  V  *  F  I  C  L  S  E  K  T  W  I  P  S  P  W  D  I  D  M  V  Y  C  A  C  R  K  R  D  V  P  *  S  Y </second_frame>
            <third_frame>   E  P  R  A  F  W  S  S  E  T  L  L  H  I  L  L  L  L  N  H  F  S  S  D  L  F  T  S  G  Y  L  S  S  H  :  I  L  E  L  N  K  F  L  W  T  E  E  N  *  L  E  M  E  D  W   : G  V  K  K  M  Q  K  V  Q  K  R  D  A  S  K  E  T  I  L  D  L  G  S  *  S  P  K  Q  T  S  A  I  *  G  A  P  T  N  *  P  G  I  *  L  L  K  S  G  R  I  *  D  S  I  K  T  Y  T  V  L  T  V  *  V  H  Q  K  I  F  T  G  I  I  I  R  I  S  S  D  F  K  T  S  S  T  P  R  F  I  D  F  C  D  S  L  W  Y  D  P  I  D  F  K  I  E  *  N  D  S  S  S  Q  Q  Q  F  C  F  S  L  I  Y  A  L  S  S  L  T  P  Q  Q  G  F  V  C  G  R  N  E  T  E  *  T  I  I  *  E  F  I  S  L  I  N  G  K  L  L  M  L  S  L  L  W  *  A  F  N  N  T  C  F  W  I  V  *  V  L  S  L  F  T  *  T  H  W  F  I  F  *  H  S  I  Y  K  K  Q  L  P  L  *  L  V  D  C  S  Q  *  L  E  *  N  H  R  C  W  F  P  I  S  G  D  F  A  C  S  N  Q  F  I  F  G  F  D  S  F  V  F  L  R  R  L  G  F  P  L  H  G  T  L  T  W  F  I  V  H  A  E  K  G  M  Y  H  N  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="101628" stop="101368"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SMVSCLCCLYCGKRLIILASGLSKCSAYSLELTGSFFSIAFTRSNYHCNWLTVHSNWNKTIDVGSLFLEILLVQTSLFLGLIHLSF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="5" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="104177" stop="104074"/>
                    <exon start="102868" stop="102808"/>
                    <exon start="102078" stop="102022"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSQGHFGHQKRCFTFCYCLTIFHQICSPLVISLPIYSNLTSFCGRKRINWRWRIGVSRRCKRYKREMHPKKLY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="104061" e_stop="103493"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="104061" e_stop="103493" e_length="569"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104061" stop="103493"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297013" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104061" stop="103513"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297011" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104061" stop="103570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297009" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTTCATCTATTGGGTTATTGCTCTGTTTTTGGTTTATTCGTTCAATCTTGTTTCTTGGTTCAATTTATTGTTTTTCTCTGCGATTGGCGTCTTCGGAGGTATATATATGCGTCAGTATTTGAGTCGCACGCATCATATCATATATTCTTGTGTCTATGAACGGAAATTAGGGCTTTCGGATTTGTAACTTTTGAGAACTGATTTAGTGGCGGTTTTAGGGTTCAGCCGCCTTTGCCGACCTTTTATACAATGTCCGACCGACTCGAACACTGATGTTAATTGACACTTTTTTCTTCCACTGTTTTATGGTTTTTGACAAGTCTCTGTGTGTGTAGGTATTGATATAATTTGGGCAGCGAGGTGATGTTCTTGATTAATATTGGCGTTTTATTGACACTGTGTTATGGTTTTTGACAATTTTGTATGTGTGGGTATTGATAGAATCTTGGGAGTGAGGTGAATTTCTTGATTAATATTGGAGTTCCATTGACATTGTGTTATGGTTTTTGACAAGTTTGTATGTGTGGGTATTAATAGAATCTTGGGAGCGAGGTGATTTTCTTGATT</gDNA_template>
            <first_frame> F  F  I  Y  W  V  I  A  L  F  L  V  Y  S  F  N  L  V  S  W  F  N  L  L  F  F  S  A  I  G  V  F  G  G  I  Y  M  R  Q  Y  L  S  R  T  H  H  I  I  Y  S  C  V  Y  E  R  K  L  G  L  S  D  L  *  L  L  R  T  D  L  V  A  V  L  G  F  S  R  L  C  R  P  F  I  Q  C  P  T  D  S  N  T  D  V  N  *  H  F  F  L  P  L  F  Y  G  F  *  Q  V  S  V  C  V  G  I  D  I  I  W  A  A  R  *  C  S  *  L  I  L  A  F  Y  *  H  C  V  M  V  F  D  N  F  V  C  V  G  I  D  R  I  L  G  V  R  *  I  S  *  L  I  L  E  F  H  *  H  C  V  M  V  F  D  K  F  V  C  V  G  I  N  R  I  L  G  A  R  *  F  S  *   </first_frame>
            <second_frame>  S  S  S  I  G  L  L  L  C  F  W  F  I  R  S  I  L  F  L  G  S  I  Y  C  F  S  L  R  L  A  S  S  E  V  Y  I  C  V  S  I  *  V  A  R  I  I  S  Y  I  L  V  S  M  N  G  N  *  G  F  R  I  C  N  F  *  E  L  I  *  W  R  F  *  G  S  A  A  F  A  D  L  L  Y  N  V  R  P  T  R  T  L  M  L  I  D  T  F  F  F  H  C  F  M  V  F  D  K  S  L  C  V  *  V  L  I  *  F  G  Q  R  G  D  V  L  D  *  Y  W  R  F  I  D  T  V  L  W  F  L  T  I  L  Y  V  W  V  L  I  E  S  W  E  *  G  E  F  L  D  *  Y  W  S  S  I  D  I  V  L  W  F  L  T  S  L  Y  V  W  V  L  I  E  S  W  E  R  G  D  F  L  D  </second_frame>
            <third_frame>   L  H  L  L  G  Y  C  S  V  F  G  L  F  V  Q  S  C  F  L  V  Q  F  I  V  F  L  C  D  W  R  L  R  R  Y  I  Y  A  S  V  F  E  S  H  A  S  Y  H  I  F  L  C  L  *  T  E  I  R  A  F  G  F  V  T  F  E  N  *  F  S  G  G  F  R  V  Q  P  P  L  P  T  F  Y  T  M  S  D  R  L  E  H  *  C  *  L  T  L  F  S  S  T  V  L  W  F  L  T  S  L  C  V  C  R  Y  *  Y  N  L  G  S  E  V  M  F  L  I  N  I  G  V  L  L  T  L  C  Y  G  F  *  Q  F  C  M  C  G  Y  *  *  N  L  G  S  E  V  N  F  L  I  N  I  G  V  P  L  T  L  C  Y  G  F  *  Q  V  C  M  C  G  Y  *  *  N  L  G  S  E  V  I  F  L  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0114O11.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="128962" PGL_stop="133959"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="128981" e_stop="129046"/>
            <exon e_start="129685" e_stop="129773"/>
            <exon e_start="130371" e_stop="130557"/>
            <exon e_start="131470" e_stop="131600"/>
            <exon e_start="131728" e_stop="131797"/>
            <exon e_start="131889" e_stop="131954"/>
            <exon e_start="132503" e_stop="132657"/>
            <exon e_start="132743" e_stop="132838"/>
            <exon e_start="133117" e_stop="133265"/>
            <exon e_start="133343" e_stop="133416"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.976" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.764" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.602" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.686" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.903" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.575" acc_prob="0.958" e_score="0.960"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="128981" e_stop="129046" e_length="66"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.976">
            <gDNA_intron_boundary i_start="129047" i_stop="129684" i_length="638"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="129685" e_stop="129773" e_length="89"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.967">
            <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="130371" e_stop="130557" e_length="187"/>
          </exon>
          <intron i_serial="3" don_prob="0.764" acc_prob="0.996">
            <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="131470" e_stop="131600" e_length="131"/>
          </exon>
          <intron i_serial="4" don_prob="0.602" acc_prob="0.991">
            <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="131728" e_stop="131797" e_length="70"/>
          </exon>
          <intron i_serial="5" don_prob="0.968" acc_prob="0.686">
            <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="131889" e_stop="131954" e_length="66"/>
          </exon>
          <intron i_serial="6" don_prob="0.991" acc_prob="0.000">
            <gDNA_intron_boundary i_start="131955" i_stop="132502" i_length="548"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="132503" e_stop="132657" e_length="155"/>
          </exon>
          <intron i_serial="7" don_prob="0.903" acc_prob="0.905">
            <gDNA_intron_boundary i_start="132658" i_stop="132742" i_length="85"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="132743" e_stop="132838" e_length="96"/>
          </exon>
          <intron i_serial="8" don_prob="0.999" acc_prob="0.935">
            <gDNA_intron_boundary i_start="132839" i_stop="133116" i_length="278"/>
          </intron>
          <exon e_serial="9" e_score="0.960">
            <gDNA_exon_boundary e_start="133117" e_stop="133265" e_length="149"/>
          </exon>
          <intron i_serial="9" don_prob="0.575" acc_prob="0.958">
            <gDNA_intron_boundary i_start="133266" i_stop="133342" i_length="77"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="133343" e_stop="133416" e_length="74"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128981" stop="129046"/>
              <exon start="129685" stop="129773"/>
              <exon start="130371" stop="130387"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313806" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128985" stop="129046"/>
              <exon start="129685" stop="129773"/>
              <exon start="130371" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131783"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E324511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128993" stop="129046"/>
              <exon start="129685" stop="129773"/>
              <exon start="130371" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131761"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128997" stop="129046"/>
              <exon start="129685" stop="129773"/>
              <exon start="130371" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131782"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688590" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128998" stop="129046"/>
              <exon start="129685" stop="129773"/>
              <exon start="130371" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132590"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252181" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128998" stop="129046"/>
              <exon start="129685" stop="129773"/>
              <exon start="130371" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131923"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128998" stop="129046"/>
              <exon start="129685" stop="129773"/>
              <exon start="130371" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131751"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129000" stop="129046"/>
              <exon start="129685" stop="129773"/>
              <exon start="130371" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131784"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E550858" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130433" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132838"/>
              <exon start="133117" stop="133265"/>
              <exon start="133343" stop="133416"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130436" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132647"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130462" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132838"/>
              <exon start="133117" stop="133191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130474" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132838"/>
              <exon start="133117" stop="133174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131498" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440226" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132747"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264355" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACAACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT : ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG : ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA : GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG : GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT : ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT : ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA : GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAG : CTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCACATACAGAGAGACGGTT : GAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACAT</gDNA_template>
            <first_frame> N  N  Q  E  K  V  E  V  L  H  L  L  S  S  I  I  N  W  *  S  W  I  :  I  I  A  L  H  V  C  *  T  N  F  Q  E  A  S  F  W  C  H  P  *  F  G  W  Y  T  S  *  Y  R :   W  H  C  E  *  D  F  K  G  F  L  S  *  V  W  K  A  M  G  W  E  R  S  S  P  H  S  R  E  N  P  N  R  S  C  C  C  R  C  *  R  L  W  A  A  T  V  K  R  *  I  S  F  A  I  L  P  N  A  V  *  S  :  V  A  Q  Y  Q  S  S  S  R  G  Q  S  I  D  *  P  F  E  R  S  W  C  T  H  G  I  G  V  K  F  F  *  I  *  H  *  G  Q  N  F  S  S  C  R :   M  E  R  V  L  L  S  Y  C  W  R  R  *  S  E  S  W  K  A  V  S  G  N  :  I  S  *  S  S  *  K  T  Q  H  G  S  I  Q  L  S  C  H  *  R  F  N  :  T  R  C  Y  C  W  *  R  C  W  N  G  S  S  C  C  T  I  S  C  K  A  V  S  S  L  Y  L  C  *  *  S  D  Q  F  S  S  R  F  A  T  R  K  V  G  T  T  C  I  S  R  * :   D  R  R  Y  F  A  F  R  T  L  V  Y  R  W  S  C  H  *  G  I  W  A  R  L  K  G  S  R  D  P  H  S :   *  F  I  P  T  R  L  F  S  H  S  F  R  T  S  S  G  C  I  F  W  M  G  R  T  I  R  S  R  C  L  Q  D  G  H  E  H  W  L  E  S  F  L  H  I  Q  R  D  G   : *  T  M  V  A  S  *  L  Q  *  G  L  L  W  *  G  I  A  S  S  C  C  G  L  H </first_frame>
            <second_frame>  T  T  K  K  K  L  K  C  F  I  F  S  V  Q  *  S  I  G  E  V  G  L :   *  L  L  S  M  S  V  E  R  T  F  K  K  L  V  S  G  V  I  L  D  L  D  G  T  L  L  N  T   : D  G  I  V  S  E  I  L  K  V  F  L  V  K  Y  G  K  Q  W  D  G  R  E  A  P  H  I  V  G  K  T  P  T  E  A  A  A  A  V  V  E  D  Y  G  L  P  L  S  R  D  E  F  L  S  Q  F  Y  P  M  L  S  D  Q :   W  R  N  I  K  A  L  P  G  A  N  R  L  I  N  H  L  S  G  H  G  V  P  M  A  L  A  S  N  S  S  K  S  N  I  E  A  K  I  F  H  H  A   : G  W  K  E  S  F  S  A  I  V  G  G  D  E  V  K  A  G  K  P  S  P  E  I :   F  L  E  A  A  K  R  L  N  M  D  P  S  S  F  L  V  I  E  D  S  I :   P  G  V  T  A  G  K  D  A  G  M  A  V  V  A  V  P  S  L  A  K  Q  S  H  L  Y  T  S  A  D  E  V  I  N  S  L  L  D  L  Q  L  E  K  W  G  L  P  A  F  Q  D   : R  I  E  G  T  L  P  L  E  P  W  Y  I  G  G  P  V  I  K  G  F  G  R  G  S  K  V  L  G  I  P  T   : A  N  L  S  P  Q  G  Y  S  A  I  L  S  E  H  P  A  G  V  Y  F  G  W  A  G  L  S  G  R  G  V  Y  K  M  V  M  S  I  G  W  N  P  F  F  T  Y  R  E  T  V  :  E  P  W  L  L  H  D  F  N  E  D  F  Y  G  E  E  L  H  L  V  V  V  G  Y   </second_frame>
            <third_frame>   Q  P  R  K  S  *  S  A  S  S  S  Q  F  N  N  Q  L  V  K  L  D   : Y  N  C  S  P  C  L  L  N  E  L  S  R  S  *  F  L  V  S  S  L  I  W  M  V  H  F  L  I  Q  :  M  A  L  *  V  R  F  *  R  F  S  *  L  S  M  E  S  N  G  M  G  E  K  L  P  T  *  *  G  K  P  Q  Q  K  L  L  L  P  L  L  K  I  M  G  C  H  C  Q  E  M  N  F  F  R  N  F  T  Q  C  C  L  I   : S  G  A  I  S  K  L  F  Q  G  P  I  D  *  L  T  I  *  A  V  M  V  Y  P  W  H  W  R  Q  I  L  L  N  L  T  L  R  P  K  F  F  I  M  Q  :  D  G  K  S  P  S  Q  L  L  L  E  E  M  K  *  K  L  E  S  R  L  R  K   : Y  F  L  K  Q  L  K  D  S  T  W  I  H  P  A  F  L  S  L  K  I  Q   : Y  Q  V  L  L  L  V  K  M  L  E  W  Q  *  L  L  Y  H  L  L  Q  S  S  L  I  F  I  P  L  L  M  K  *  S  I  L  F  *  I  C  N  *  K  S  G  D  Y  L  H  F  K  I  :  G  *  K  V  L  C  L  *  N  L  G  I  *  V  V  L  S  L  R  D  L  G  A  A  Q  R  F  S  G  S  P  Q  :  L  I  Y  P  H  K  V  I  Q  P  F  F  Q  N  I  Q  R  V  Y  I  L  D  G  Q  D  Y  Q  V  E  V  S  T  R  W  S  *  A  L  V  G  I  L  S  S  H  T  E  R  R  L :   N  H  G  C  F  M  T  S  M  R  T  S  M  V  R  N  C  I  *  L  L  W  A  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129689" stop="129773"/>
                    <exon start="130371" stop="130557"/>
                    <exon start="131470" stop="131600"/>
                    <exon start="131728" stop="131797"/>
                    <exon start="131889" stop="131954"/>
                    <exon start="132503" stop="132657"/>
                    <exon start="132743" stop="132838"/>
                    <exon start="133117" stop="133265"/>
                    <exon start="133343" stop="133414"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1011</number_coding_nucleotides>
                  <number_encoded_amino_acids>337</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLSMSVERTFKKLVSGVILDLDGTLLNTDGIVSEILKVFLVKYGKQWDGREAPHIVGKTPTEAAAAVVEDYGLPLSRDEFLSQFYPMLSDQWRNIKALPGANRLINHLSGHGVPMALASNSSKSNIEAKIFHHAGWKESFSAIVGGDEVKAGKPSPEIFLEAAKRLNMDPSSFLVIEDSIPGVTAGKDAGMAVVAVPSLAKQSHLYTSADEVINSLLDLQLEKWGLPAFQDRIEGTLPLEPWYIGGPVIKGFGRGSKVLGIPTANLSPQGYSAILSEHPAGVYFGWAGLSGRGVYKMVMSIGWNPFFTYRETVEPWLLHDFNEDFYGEELHLVVVGY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="128992" e_stop="129060"/>
            <exon e_start="129664" e_stop="129773"/>
            <exon e_start="130371" e_stop="130557"/>
            <exon e_start="131470" e_stop="131600"/>
            <exon e_start="131728" e_stop="131797"/>
            <exon e_start="131889" e_stop="131954"/>
            <exon e_start="132503" e_stop="132657"/>
            <exon e_start="132743" e_stop="132838"/>
            <exon e_start="133117" e_stop="133265"/>
            <exon e_start="133343" e_stop="133416"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.549" e_score="0.879"/>
          <exon-intron don_prob="0.999" acc_prob="0.967" e_score="0.982"/>
          <exon-intron don_prob="0.764" acc_prob="0.996" e_score="0.979"/>
          <exon-intron don_prob="0.602" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.686" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.903" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.575" acc_prob="0.958" e_score="0.960"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.879">
            <gDNA_exon_boundary e_start="128992" e_stop="129060" e_length="69"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.549">
            <gDNA_intron_boundary i_start="129061" i_stop="129663" i_length="603"/>
          </intron>
          <exon e_serial="2" e_score="0.982">
            <gDNA_exon_boundary e_start="129664" e_stop="129773" e_length="110"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.967">
            <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597"/>
          </intron>
          <exon e_serial="3" e_score="0.979">
            <gDNA_exon_boundary e_start="130371" e_stop="130557" e_length="187"/>
          </exon>
          <intron i_serial="3" don_prob="0.764" acc_prob="0.996">
            <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="131470" e_stop="131600" e_length="131"/>
          </exon>
          <intron i_serial="4" don_prob="0.602" acc_prob="0.991">
            <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="131728" e_stop="131797" e_length="70"/>
          </exon>
          <intron i_serial="5" don_prob="0.968" acc_prob="0.686">
            <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="131889" e_stop="131954" e_length="66"/>
          </exon>
          <intron i_serial="6" don_prob="0.991" acc_prob="0.000">
            <gDNA_intron_boundary i_start="131955" i_stop="132502" i_length="548"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="132503" e_stop="132657" e_length="155"/>
          </exon>
          <intron i_serial="7" don_prob="0.903" acc_prob="0.905">
            <gDNA_intron_boundary i_start="132658" i_stop="132742" i_length="85"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="132743" e_stop="132838" e_length="96"/>
          </exon>
          <intron i_serial="8" don_prob="0.999" acc_prob="0.935">
            <gDNA_intron_boundary i_start="132839" i_stop="133116" i_length="278"/>
          </intron>
          <exon e_serial="9" e_score="0.960">
            <gDNA_exon_boundary e_start="133117" e_stop="133265" e_length="149"/>
          </exon>
          <intron i_serial="9" don_prob="0.575" acc_prob="0.958">
            <gDNA_intron_boundary i_start="133266" i_stop="133342" i_length="77"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="133343" e_stop="133416" e_length="74"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128992" stop="129060"/>
              <exon start="129664" stop="129773"/>
              <exon start="130371" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132622"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589912" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129000" stop="129060"/>
              <exon start="129664" stop="129773"/>
              <exon start="130371" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E614797" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129003" stop="129060"/>
              <exon start="129664" stop="129773"/>
              <exon start="130371" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132776"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576859" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129003" stop="129060"/>
              <exon start="129664" stop="129773"/>
              <exon start="130371" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131793"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562455" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129005" stop="129060"/>
              <exon start="129664" stop="129773"/>
              <exon start="130371" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131751"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469217" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129664" stop="129773"/>
              <exon start="130371" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131903"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E584184" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130433" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132838"/>
              <exon start="133117" stop="133265"/>
              <exon start="133343" stop="133416"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130436" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132647"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130462" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132838"/>
              <exon start="133117" stop="133191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130474" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132838"/>
              <exon start="133117" stop="133174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131498" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440226" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132747"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264355" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACAT : GTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG : ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA : GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG : GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT : ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT : ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA : GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAG : CTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCACATACAGAGAGACGGTT : GAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACAT</gDNA_template>
            <first_frame> K  S  *  S  A  S  S  S  Q  F  N  N  Q  L  V  K  L  D  C  E  Y  L  H  :  V  S  V  S  V  W  Q  I  I  A  L  H  V  C  *  T  N  F  Q  E  A  S  F  W  C  H  P  *  F  G  W  Y  T  S  *  Y  R :   W  H  C  E  *  D  F  K  G  F  L  S  *  V  W  K  A  M  G  W  E  R  S  S  P  H  S  R  E  N  P  N  R  S  C  C  C  R  C  *  R  L  W  A  A  T  V  K  R  *  I  S  F  A  I  L  P  N  A  V  *  S  :  V  A  Q  Y  Q  S  S  S  R  G  Q  S  I  D  *  P  F  E  R  S  W  C  T  H  G  I  G  V  K  F  F  *  I  *  H  *  G  Q  N  F  S  S  C  R :   M  E  R  V  L  L  S  Y  C  W  R  R  *  S  E  S  W  K  A  V  S  G  N  :  I  S  *  S  S  *  K  T  Q  H  G  S  I  Q  L  S  C  H  *  R  F  N  :  T  R  C  Y  C  W  *  R  C  W  N  G  S  S  C  C  T  I  S  C  K  A  V  S  S  L  Y  L  C  *  *  S  D  Q  F  S  S  R  F  A  T  R  K  V  G  T  T  C  I  S  R  * :   D  R  R  Y  F  A  F  R  T  L  V  Y  R  W  S  C  H  *  G  I  W  A  R  L  K  G  S  R  D  P  H  S :   *  F  I  P  T  R  L  F  S  H  S  F  R  T  S  S  G  C  I  F  W  M  G  R  T  I  R  S  R  C  L  Q  D  G  H  E  H  W  L  E  S  F  L  H  I  Q  R  D  G   : *  T  M  V  A  S  *  L  Q  *  G  L  L  W  *  G  I  A  S  S  C  C  G  L  H </first_frame>
            <second_frame>  K  V  E  V  L  H  L  L  S  S  I  I  N  W  *  S  W  I  V  S  I  Y  M :   Y  L  F  L  C  G  R  *  L  L  S  M  S  V  E  R  T  F  K  K  L  V  S  G  V  I  L  D  L  D  G  T  L  L  N  T   : D  G  I  V  S  E  I  L  K  V  F  L  V  K  Y  G  K  Q  W  D  G  R  E  A  P  H  I  V  G  K  T  P  T  E  A  A  A  A  V  V  E  D  Y  G  L  P  L  S  R  D  E  F  L  S  Q  F  Y  P  M  L  S  D  Q :   W  R  N  I  K  A  L  P  G  A  N  R  L  I  N  H  L  S  G  H  G  V  P  M  A  L  A  S  N  S  S  K  S  N  I  E  A  K  I  F  H  H  A   : G  W  K  E  S  F  S  A  I  V  G  G  D  E  V  K  A  G  K  P  S  P  E  I :   F  L  E  A  A  K  R  L  N  M  D  P  S  S  F  L  V  I  E  D  S  I :   P  G  V  T  A  G  K  D  A  G  M  A  V  V  A  V  P  S  L  A  K  Q  S  H  L  Y  T  S  A  D  E  V  I  N  S  L  L  D  L  Q  L  E  K  W  G  L  P  A  F  Q  D   : R  I  E  G  T  L  P  L  E  P  W  Y  I  G  G  P  V  I  K  G  F  G  R  G  S  K  V  L  G  I  P  T   : A  N  L  S  P  Q  G  Y  S  A  I  L  S  E  H  P  A  G  V  Y  F  G  W  A  G  L  S  G  R  G  V  Y  K  M  V  M  S  I  G  W  N  P  F  F  T  Y  R  E  T  V  :  E  P  W  L  L  H  D  F  N  E  D  F  Y  G  E  E  L  H  L  V  V  V  G  Y   </second_frame>
            <third_frame>   K  L  K  C  F  I  F  S  V  Q  *  S  I  G  E  V  G  L  *  V  F  T   : C  I  C  F  C  V  A  D  N  C  S  P  C  L  L  N  E  L  S  R  S  *  F  L  V  S  S  L  I  W  M  V  H  F  L  I  Q  :  M  A  L  *  V  R  F  *  R  F  S  *  L  S  M  E  S  N  G  M  G  E  K  L  P  T  *  *  G  K  P  Q  Q  K  L  L  L  P  L  L  K  I  M  G  C  H  C  Q  E  M  N  F  F  R  N  F  T  Q  C  C  L  I   : S  G  A  I  S  K  L  F  Q  G  P  I  D  *  L  T  I  *  A  V  M  V  Y  P  W  H  W  R  Q  I  L  L  N  L  T  L  R  P  K  F  F  I  M  Q  :  D  G  K  S  P  S  Q  L  L  L  E  E  M  K  *  K  L  E  S  R  L  R  K   : Y  F  L  K  Q  L  K  D  S  T  W  I  H  P  A  F  L  S  L  K  I  Q   : Y  Q  V  L  L  L  V  K  M  L  E  W  Q  *  L  L  Y  H  L  L  Q  S  S  L  I  F  I  P  L  L  M  K  *  S  I  L  F  *  I  C  N  *  K  S  G  D  Y  L  H  F  K  I  :  G  *  K  V  L  C  L  *  N  L  G  I  *  V  V  L  S  L  R  D  L  G  A  A  Q  R  F  S  G  S  P  Q  :  L  I  Y  P  H  K  V  I  Q  P  F  F  Q  N  I  Q  R  V  Y  I  L  D  G  Q  D  Y  Q  V  E  V  S  T  R  W  S  *  A  L  V  G  I  L  S  S  H  T  E  R  R  L :   N  H  G  C  F  M  T  S  M  R  T  S  M  V  R  N  C  I  *  L  L  W  A  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129689" stop="129773"/>
                    <exon start="130371" stop="130557"/>
                    <exon start="131470" stop="131600"/>
                    <exon start="131728" stop="131797"/>
                    <exon start="131889" stop="131954"/>
                    <exon start="132503" stop="132657"/>
                    <exon start="132743" stop="132838"/>
                    <exon start="133117" stop="133265"/>
                    <exon start="133343" stop="133414"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1011</number_coding_nucleotides>
                  <number_encoded_amino_acids>337</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLSMSVERTFKKLVSGVILDLDGTLLNTDGIVSEILKVFLVKYGKQWDGREAPHIVGKTPTEAAAAVVEDYGLPLSRDEFLSQFYPMLSDQWRNIKALPGANRLINHLSGHGVPMALASNSSKSNIEAKIFHHAGWKESFSAIVGGDEVKAGKPSPEIFLEAAKRLNMDPSSFLVIEDSIPGVTAGKDAGMAVVAVPSLAKQSHLYTSADEVINSLLDLQLEKWGLPAFQDRIEGTLPLEPWYIGGPVIKGFGRGSKVLGIPTANLSPQGYSAILSEHPAGVYFGWAGLSGRGVYKMVMSIGWNPFFTYRETVEPWLLHDFNEDFYGEELHLVVVGY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="128962" e_stop="129046"/>
            <exon e_start="129664" e_stop="129773"/>
            <exon e_start="130371" e_stop="130557"/>
            <exon e_start="131470" e_stop="131600"/>
            <exon e_start="131728" e_stop="131797"/>
            <exon e_start="131889" e_stop="131954"/>
            <exon e_start="132503" e_stop="132657"/>
            <exon e_start="132743" e_stop="132838"/>
            <exon e_start="133117" e_stop="133265"/>
            <exon e_start="133343" e_stop="133426"/>
            <exon e_start="133502" e_stop="133959"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.549" e_score="0.976"/>
          <exon-intron don_prob="0.999" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.764" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.602" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.686" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.903" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.575" acc_prob="0.958" e_score="0.960"/>
          <exon-intron don_prob="0.987" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.976">
            <gDNA_exon_boundary e_start="128962" e_stop="129046" e_length="85"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.549">
            <gDNA_intron_boundary i_start="129047" i_stop="129663" i_length="617"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="129664" e_stop="129773" e_length="110"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.967">
            <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="130371" e_stop="130557" e_length="187"/>
          </exon>
          <intron i_serial="3" don_prob="0.764" acc_prob="0.996">
            <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="131470" e_stop="131600" e_length="131"/>
          </exon>
          <intron i_serial="4" don_prob="0.602" acc_prob="0.991">
            <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="131728" e_stop="131797" e_length="70"/>
          </exon>
          <intron i_serial="5" don_prob="0.968" acc_prob="0.686">
            <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="131889" e_stop="131954" e_length="66"/>
          </exon>
          <intron i_serial="6" don_prob="0.991" acc_prob="0.000">
            <gDNA_intron_boundary i_start="131955" i_stop="132502" i_length="548"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="132503" e_stop="132657" e_length="155"/>
          </exon>
          <intron i_serial="7" don_prob="0.903" acc_prob="0.905">
            <gDNA_intron_boundary i_start="132658" i_stop="132742" i_length="85"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="132743" e_stop="132838" e_length="96"/>
          </exon>
          <intron i_serial="8" don_prob="0.999" acc_prob="0.935">
            <gDNA_intron_boundary i_start="132839" i_stop="133116" i_length="278"/>
          </intron>
          <exon e_serial="9" e_score="0.960">
            <gDNA_exon_boundary e_start="133117" e_stop="133265" e_length="149"/>
          </exon>
          <intron i_serial="9" don_prob="0.575" acc_prob="0.958">
            <gDNA_intron_boundary i_start="133266" i_stop="133342" i_length="77"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="133343" e_stop="133426" e_length="84"/>
          </exon>
          <intron i_serial="10" don_prob="0.987" acc_prob="0.999">
            <gDNA_intron_boundary i_start="133427" i_stop="133501" i_length="75"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="133502" e_stop="133959" e_length="458"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128962" stop="129046"/>
              <exon start="129664" stop="129773"/>
              <exon start="130371" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132838"/>
              <exon start="133117" stop="133265"/>
              <exon start="133343" stop="133426"/>
              <exon start="133502" stop="133959"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129664" stop="129773"/>
              <exon start="130371" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131903"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E584184" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130433" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132838"/>
              <exon start="133117" stop="133265"/>
              <exon start="133343" stop="133416"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130436" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132647"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130462" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132838"/>
              <exon start="133117" stop="133191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130474" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132838"/>
              <exon start="133117" stop="133174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131498" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440226" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132747"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264355" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAGTCCCCATTTCCCCATAACAACCAAGAAAAAGTTGAAGTGCTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATT : GTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG : ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA : GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG : GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT : ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT : ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA : GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAG : CTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCACATACAGAGAGACGGTT : GAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACATACGGCCGGAG : GCCAACTTTTCGTCACTTGAAGCCTTGATAGCAAAAATTCACGAGGACAGGAAGATTGCAGAAAGAGCTCTCGAACTTCCTCAATACTTGAAGTACAAGGACGATCCATACCTTAAAAGTTCTCTGCATCAACAAAATTGATCATTGAAGTGTTGAAGTTCATTATTGTTCTGATTGGGATTGTATCTGTTTATTCTGTCCTAATTCCTCAGACTACAATAGTCTCCCCATCAAAATGCTCTATACAATAAAAAGATAAAAAGAATTTGAATGTATAGCTATTCAGAAGTTAAAGAACCTTCCAGGGGGTATTAGTGAATGGCAAAGGGTTCAAGTGCAGGATCTTTGTACTGAGAATTTCAAGTTCCTGTGTAAATGTTGATTAATGTAACTTGTTTTCTATCTGTTTATAATATGGAAACATGCAAGCTGATGCAGATTGTAAATTGCTTCCTTTT</gDNA_template>
            <first_frame> S  V  P  I  S  P  *  Q  P  R  K  S  *  S  A  S  S  S  Q  F  N  N  Q  L  V  K  L  D   : C  I  C  F  C  V  A  D  N  C  S  P  C  L  L  N  E  L  S  R  S  *  F  L  V  S  S  L  I  W  M  V  H  F  L  I  Q  :  M  A  L  *  V  R  F  *  R  F  S  *  L  S  M  E  S  N  G  M  G  E  K  L  P  T  *  *  G  K  P  Q  Q  K  L  L  L  P  L  L  K  I  M  G  C  H  C  Q  E  M  N  F  F  R  N  F  T  Q  C  C  L  I   : S  G  A  I  S  K  L  F  Q  G  P  I  D  *  L  T  I  *  A  V  M  V  Y  P  W  H  W  R  Q  I  L  L  N  L  T  L  R  P  K  F  F  I  M  Q  :  D  G  K  S  P  S  Q  L  L  L  E  E  M  K  *  K  L  E  S  R  L  R  K   : Y  F  L  K  Q  L  K  D  S  T  W  I  H  P  A  F  L  S  L  K  I  Q   : Y  Q  V  L  L  L  V  K  M  L  E  W  Q  *  L  L  Y  H  L  L  Q  S  S  L  I  F  I  P  L  L  M  K  *  S  I  L  F  *  I  C  N  *  K  S  G  D  Y  L  H  F  K  I  :  G  *  K  V  L  C  L  *  N  L  G  I  *  V  V  L  S  L  R  D  L  G  A  A  Q  R  F  S  G  S  P  Q  :  L  I  Y  P  H  K  V  I  Q  P  F  F  Q  N  I  Q  R  V  Y  I  L  D  G  Q  D  Y  Q  V  E  V  S  T  R  W  S  *  A  L  V  G  I  L  S  S  H  T  E  R  R  L :   N  H  G  C  F  M  T  S  M  R  T  S  M  V  R  N  C  I  *  L  L  W  A  T  Y  G  R  R :   P  T  F  R  H  L  K  P  *  *  Q  K  F  T  R  T  G  R  L  Q  K  E  L  S  N  F  L  N  T  *  S  T  R  T  I  H  T  L  K  V  L  C  I  N  K  I  D  H  *  S  V  E  V  H  Y  C  S  D  W  D  C  I  C  L  F  C  P  N  S  S  D  Y  N  S  L  P  I  K  M  L  Y  T  I  K  R  *  K  E  F  E  C  I  A  I  Q  K  L  K  N  L  P  G  G  I  S  E  W  Q  R  V  Q  V  Q  D  L  C  T  E  N  F  K  F  L  C  K  C  *  L  M  *  L  V  F  Y  L  F  I  I  W  K  H  A  S  *  C  R  L  *  I  A  S  F  </first_frame>
            <second_frame>  Q  S  P  F  P  H  N  N  Q  E  K  V  E  V  L  H  L  L  S  S  I  I  N  W  *  S  W  I  :  V  S  V  S  V  W  Q  I  I  A  L  H  V  C  *  T  N  F  Q  E  A  S  F  W  C  H  P  *  F  G  W  Y  T  S  *  Y  R :   W  H  C  E  *  D  F  K  G  F  L  S  *  V  W  K  A  M  G  W  E  R  S  S  P  H  S  R  E  N  P  N  R  S  C  C  C  R  C  *  R  L  W  A  A  T  V  K  R  *  I  S  F  A  I  L  P  N  A  V  *  S  :  V  A  Q  Y  Q  S  S  S  R  G  Q  S  I  D  *  P  F  E  R  S  W  C  T  H  G  I  G  V  K  F  F  *  I  *  H  *  G  Q  N  F  S  S  C  R :   M  E  R  V  L  L  S  Y  C  W  R  R  *  S  E  S  W  K  A  V  S  G  N  :  I  S  *  S  S  *  K  T  Q  H  G  S  I  Q  L  S  C  H  *  R  F  N  :  T  R  C  Y  C  W  *  R  C  W  N  G  S  S  C  C  T  I  S  C  K  A  V  S  S  L  Y  L  C  *  *  S  D  Q  F  S  S  R  F  A  T  R  K  V  G  T  T  C  I  S  R  * :   D  R  R  Y  F  A  F  R  T  L  V  Y  R  W  S  C  H  *  G  I  W  A  R  L  K  G  S  R  D  P  H  S :   *  F  I  P  T  R  L  F  S  H  S  F  R  T  S  S  G  C  I  F  W  M  G  R  T  I  R  S  R  C  L  Q  D  G  H  E  H  W  L  E  S  F  L  H  I  Q  R  D  G   : *  T  M  V  A  S  *  L  Q  *  G  L  L  W  *  G  I  A  S  S  C  C  G  L  H  T  A  G   : G  Q  L  F  V  T  *  S  L  D  S  K  N  S  R  G  Q  E  D  C  R  K  S  S  R  T  S  S  I  L  E  V  Q  G  R  S  I  P  *  K  F  S  A  S  T  K  L  I  I  E  V  L  K  F  I  I  V  L  I  G  I  V  S  V  Y  S  V  L  I  P  Q  T  T  I  V  S  P  S  K  C  S  I  Q  *  K  D  K  K  N  L  N  V  *  L  F  R  S  *  R  T  F  Q  G  V  L  V  N  G  K  G  F  K  C  R  I  F  V  L  R  I  S  S  S  C  V  N  V  D  *  C  N  L  F  S  I  C  L  *  Y  G  N  M  Q  A  D  A  D  C  K  L  L  P  F </second_frame>
            <third_frame>   S  P  H  F  P  I  T  T  K  K  K  L  K  C  F  I  F  S  V  Q  *  S  I  G  E  V  G  L :   Y  L  F  L  C  G  R  *  L  L  S  M  S  V  E  R  T  F  K  K  L  V  S  G  V  I  L  D  L  D  G  T  L  L  N  T   : D  G  I  V  S  E  I  L  K  V  F  L  V  K  Y  G  K  Q  W  D  G  R  E  A  P  H  I  V  G  K  T  P  T  E  A  A  A  A  V  V  E  D  Y  G  L  P  L  S  R  D  E  F  L  S  Q  F  Y  P  M  L  S  D  Q :   W  R  N  I  K  A  L  P  G  A  N  R  L  I  N  H  L  S  G  H  G  V  P  M  A  L  A  S  N  S  S  K  S  N  I  E  A  K  I  F  H  H  A   : G  W  K  E  S  F  S  A  I  V  G  G  D  E  V  K  A  G  K  P  S  P  E  I :   F  L  E  A  A  K  R  L  N  M  D  P  S  S  F  L  V  I  E  D  S  I :   P  G  V  T  A  G  K  D  A  G  M  A  V  V  A  V  P  S  L  A  K  Q  S  H  L  Y  T  S  A  D  E  V  I  N  S  L  L  D  L  Q  L  E  K  W  G  L  P  A  F  Q  D   : R  I  E  G  T  L  P  L  E  P  W  Y  I  G  G  P  V  I  K  G  F  G  R  G  S  K  V  L  G  I  P  T   : A  N  L  S  P  Q  G  Y  S  A  I  L  S  E  H  P  A  G  V  Y  F  G  W  A  G  L  S  G  R  G  V  Y  K  M  V  M  S  I  G  W  N  P  F  F  T  Y  R  E  T  V  :  E  P  W  L  L  H  D  F  N  E  D  F  Y  G  E  E  L  H  L  V  V  V  G  Y  I  R  P  E  :  A  N  F  S  S  L  E  A  L  I  A  K  I  H  E  D  R  K  I  A  E  R  A  L  E  L  P  Q  Y  L  K  Y  K  D  D  P  Y  L  K  S  S  L  H  Q  Q  N  *  S  L  K  C  *  S  S  L  L  F  *  L  G  L  Y  L  F  I  L  S  *  F  L  R  L  Q  *  S  P  H  Q  N  A  L  Y  N  K  K  I  K  R  I  *  M  Y  S  Y  S  E  V  K  E  P  S  R  G  Y  *  *  M  A  K  G  S  S  A  G  S  L  Y  *  E  F  Q  V  P  V  *  M  L  I  N  V  T  C  F  L  S  V  Y  N  M  E  T  C  K  L  M  Q  I  V  N  C  F  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129689" stop="129773"/>
                    <exon start="130371" stop="130557"/>
                    <exon start="131470" stop="131600"/>
                    <exon start="131728" stop="131797"/>
                    <exon start="131889" stop="131954"/>
                    <exon start="132503" stop="132657"/>
                    <exon start="132743" stop="132838"/>
                    <exon start="133117" stop="133265"/>
                    <exon start="133343" stop="133426"/>
                    <exon start="133502" stop="133642"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1161</number_coding_nucleotides>
                  <number_encoded_amino_acids>387</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLSMSVERTFKKLVSGVILDLDGTLLNTDGIVSEILKVFLVKYGKQWDGREAPHIVGKTPTEAAAAVVEDYGLPLSRDEFLSQFYPMLSDQWRNIKALPGANRLINHLSGHGVPMALASNSSKSNIEAKIFHHAGWKESFSAIVGGDEVKAGKPSPEIFLEAAKRLNMDPSSFLVIEDSIPGVTAGKDAGMAVVAVPSLAKQSHLYTSADEVINSLLDLQLEKWGLPAFQDRIEGTLPLEPWYIGGPVIKGFGRGSKVLGIPTANLSPQGYSAILSEHPAGVYFGWAGLSGRGVYKMVMSIGWNPFFTYRETVEPWLLHDFNEDFYGEELHLVVVGYIRPEANFSSLEALIAKIHEDRKIAERALELPQYLKYKDDPYLKSSLHQQN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="130362" e_stop="130557"/>
            <exon e_start="131470" e_stop="131600"/>
            <exon e_start="131728" e_stop="131797"/>
            <exon e_start="131889" e_stop="131954"/>
            <exon e_start="132503" e_stop="132657"/>
            <exon e_start="132743" e_stop="132838"/>
            <exon e_start="133117" e_stop="133265"/>
            <exon e_start="133343" e_stop="133416"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.764" acc_prob="0.996" e_score="0.969"/>
          <exon-intron don_prob="0.602" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.686" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.903" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.575" acc_prob="0.958" e_score="0.960"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="130362" e_stop="130557" e_length="196"/>
          </exon>
          <intron i_serial="1" don_prob="0.764" acc_prob="0.996">
            <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="131470" e_stop="131600" e_length="131"/>
          </exon>
          <intron i_serial="2" don_prob="0.602" acc_prob="0.991">
            <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="131728" e_stop="131797" e_length="70"/>
          </exon>
          <intron i_serial="3" don_prob="0.968" acc_prob="0.686">
            <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="131889" e_stop="131954" e_length="66"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.000">
            <gDNA_intron_boundary i_start="131955" i_stop="132502" i_length="548"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="132503" e_stop="132657" e_length="155"/>
          </exon>
          <intron i_serial="5" don_prob="0.903" acc_prob="0.905">
            <gDNA_intron_boundary i_start="132658" i_stop="132742" i_length="85"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="132743" e_stop="132838" e_length="96"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.935">
            <gDNA_intron_boundary i_start="132839" i_stop="133116" i_length="278"/>
          </intron>
          <exon e_serial="7" e_score="0.960">
            <gDNA_exon_boundary e_start="133117" e_stop="133265" e_length="149"/>
          </exon>
          <intron i_serial="7" don_prob="0.575" acc_prob="0.958">
            <gDNA_intron_boundary i_start="133266" i_stop="133342" i_length="77"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="133343" e_stop="133416" e_length="74"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130362" stop="130557"/>
              <exon start="131470" stop="131577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273774" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130433" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132838"/>
              <exon start="133117" stop="133265"/>
              <exon start="133343" stop="133416"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130436" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132647"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130462" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132838"/>
              <exon start="133117" stop="133191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130474" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132838"/>
              <exon start="133117" stop="133174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131498" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440226" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132747"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264355" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA : GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG : GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT : ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT : ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA : GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAG : CTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCACATACAGAGAGACGGTT : GAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACAT</gDNA_template>
            <first_frame> F  *  Q  M  A  L  *  V  R  F  *  R  F  S  *  L  S  M  E  S  N  G  M  G  E  K  L  P  T  *  *  G  K  P  Q  Q  K  L  L  L  P  L  L  K  I  M  G  C  H  C  Q  E  M  N  F  F  R  N  F  T  Q  C  C  L  I   : S  G  A  I  S  K  L  F  Q  G  P  I  D  *  L  T  I  *  A  V  M  V  Y  P  W  H  W  R  Q  I  L  L  N  L  T  L  R  P  K  F  F  I  M  Q  :  D  G  K  S  P  S  Q  L  L  L  E  E  M  K  *  K  L  E  S  R  L  R  K   : Y  F  L  K  Q  L  K  D  S  T  W  I  H  P  A  F  L  S  L  K  I  Q   : Y  Q  V  L  L  L  V  K  M  L  E  W  Q  *  L  L  Y  H  L  L  Q  S  S  L  I  F  I  P  L  L  M  K  *  S  I  L  F  *  I  C  N  *  K  S  G  D  Y  L  H  F  K  I  :  G  *  K  V  L  C  L  *  N  L  G  I  *  V  V  L  S  L  R  D  L  G  A  A  Q  R  F  S  G  S  P  Q  :  L  I  Y  P  H  K  V  I  Q  P  F  F  Q  N  I  Q  R  V  Y  I  L  D  G  Q  D  Y  Q  V  E  V  S  T  R  W  S  *  A  L  V  G  I  L  S  S  H  T  E  R  R  L :   N  H  G  C  F  M  T  S  M  R  T  S  M  V  R  N  C  I  *  L  L  W  A  T  </first_frame>
            <second_frame>  S  D  R  W  H  C  E  *  D  F  K  G  F  L  S  *  V  W  K  A  M  G  W  E  R  S  S  P  H  S  R  E  N  P  N  R  S  C  C  C  R  C  *  R  L  W  A  A  T  V  K  R  *  I  S  F  A  I  L  P  N  A  V  *  S  :  V  A  Q  Y  Q  S  S  S  R  G  Q  S  I  D  *  P  F  E  R  S  W  C  T  H  G  I  G  V  K  F  F  *  I  *  H  *  G  Q  N  F  S  S  C  R :   M  E  R  V  L  L  S  Y  C  W  R  R  *  S  E  S  W  K  A  V  S  G  N  :  I  S  *  S  S  *  K  T  Q  H  G  S  I  Q  L  S  C  H  *  R  F  N  :  T  R  C  Y  C  W  *  R  C  W  N  G  S  S  C  C  T  I  S  C  K  A  V  S  S  L  Y  L  C  *  *  S  D  Q  F  S  S  R  F  A  T  R  K  V  G  T  T  C  I  S  R  * :   D  R  R  Y  F  A  F  R  T  L  V  Y  R  W  S  C  H  *  G  I  W  A  R  L  K  G  S  R  D  P  H  S :   *  F  I  P  T  R  L  F  S  H  S  F  R  T  S  S  G  C  I  F  W  M  G  R  T  I  R  S  R  C  L  Q  D  G  H  E  H  W  L  E  S  F  L  H  I  Q  R  D  G   : *  T  M  V  A  S  *  L  Q  *  G  L  L  W  *  G  I  A  S  S  C  C  G  L  H </second_frame>
            <third_frame>   L  T  D  G  I  V  S  E  I  L  K  V  F  L  V  K  Y  G  K  Q  W  D  G  R  E  A  P  H  I  V  G  K  T  P  T  E  A  A  A  A  V  V  E  D  Y  G  L  P  L  S  R  D  E  F  L  S  Q  F  Y  P  M  L  S  D  Q :   W  R  N  I  K  A  L  P  G  A  N  R  L  I  N  H  L  S  G  H  G  V  P  M  A  L  A  S  N  S  S  K  S  N  I  E  A  K  I  F  H  H  A   : G  W  K  E  S  F  S  A  I  V  G  G  D  E  V  K  A  G  K  P  S  P  E  I :   F  L  E  A  A  K  R  L  N  M  D  P  S  S  F  L  V  I  E  D  S  I :   P  G  V  T  A  G  K  D  A  G  M  A  V  V  A  V  P  S  L  A  K  Q  S  H  L  Y  T  S  A  D  E  V  I  N  S  L  L  D  L  Q  L  E  K  W  G  L  P  A  F  Q  D   : R  I  E  G  T  L  P  L  E  P  W  Y  I  G  G  P  V  I  K  G  F  G  R  G  S  K  V  L  G  I  P  T   : A  N  L  S  P  Q  G  Y  S  A  I  L  S  E  H  P  A  G  V  Y  F  G  W  A  G  L  S  G  R  G  V  Y  K  M  V  M  S  I  G  W  N  P  F  F  T  Y  R  E  T  V  :  E  P  W  L  L  H  D  F  N  E  D  F  Y  G  E  E  L  H  L  V  V  V  G  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="130364" stop="130557"/>
                    <exon start="131470" stop="131600"/>
                    <exon start="131728" stop="131797"/>
                    <exon start="131889" stop="131954"/>
                    <exon start="132503" stop="132657"/>
                    <exon start="132743" stop="132838"/>
                    <exon start="133117" stop="133265"/>
                    <exon start="133343" stop="133414"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>933</number_coding_nucleotides>
                  <number_encoded_amino_acids>311</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTDGIVSEILKVFLVKYGKQWDGREAPHIVGKTPTEAAAAVVEDYGLPLSRDEFLSQFYPMLSDQWRNIKALPGANRLINHLSGHGVPMALASNSSKSNIEAKIFHHAGWKESFSAIVGGDEVKAGKPSPEIFLEAAKRLNMDPSSFLVIEDSIPGVTAGKDAGMAVVAVPSLAKQSHLYTSADEVINSLLDLQLEKWGLPAFQDRIEGTLPLEPWYIGGPVIKGFGRGSKVLGIPTANLSPQGYSAILSEHPAGVYFGWAGLSGRGVYKMVMSIGWNPFFTYRETVEPWLLHDFNEDFYGEELHLVVVGY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="129005" e_stop="129060"/>
            <exon e_start="129685" e_stop="129773"/>
            <exon e_start="130371" e_stop="130557"/>
            <exon e_start="131470" e_stop="131600"/>
            <exon e_start="131728" e_stop="131797"/>
            <exon e_start="131889" e_stop="131954"/>
            <exon e_start="132503" e_stop="132657"/>
            <exon e_start="132743" e_stop="132838"/>
            <exon e_start="133117" e_stop="133265"/>
            <exon e_start="133343" e_stop="133416"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.976" e_score="0.875"/>
          <exon-intron don_prob="0.999" acc_prob="0.967" e_score="0.944"/>
          <exon-intron don_prob="0.764" acc_prob="0.996" e_score="0.963"/>
          <exon-intron don_prob="0.602" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.686" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.903" acc_prob="0.905" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.575" acc_prob="0.958" e_score="0.960"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.875">
            <gDNA_exon_boundary e_start="129005" e_stop="129060" e_length="56"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.976">
            <gDNA_intron_boundary i_start="129061" i_stop="129684" i_length="624"/>
          </intron>
          <exon e_serial="2" e_score="0.944">
            <gDNA_exon_boundary e_start="129685" e_stop="129773" e_length="89"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.967">
            <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597"/>
          </intron>
          <exon e_serial="3" e_score="0.963">
            <gDNA_exon_boundary e_start="130371" e_stop="130557" e_length="187"/>
          </exon>
          <intron i_serial="3" don_prob="0.764" acc_prob="0.996">
            <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="131470" e_stop="131600" e_length="131"/>
          </exon>
          <intron i_serial="4" don_prob="0.602" acc_prob="0.991">
            <gDNA_intron_boundary i_start="131601" i_stop="131727" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="131728" e_stop="131797" e_length="70"/>
          </exon>
          <intron i_serial="5" don_prob="0.968" acc_prob="0.686">
            <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="131889" e_stop="131954" e_length="66"/>
          </exon>
          <intron i_serial="6" don_prob="0.991" acc_prob="0.000">
            <gDNA_intron_boundary i_start="131955" i_stop="132502" i_length="548"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="132503" e_stop="132657" e_length="155"/>
          </exon>
          <intron i_serial="7" don_prob="0.903" acc_prob="0.905">
            <gDNA_intron_boundary i_start="132658" i_stop="132742" i_length="85"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="132743" e_stop="132838" e_length="96"/>
          </exon>
          <intron i_serial="8" don_prob="0.999" acc_prob="0.935">
            <gDNA_intron_boundary i_start="132839" i_stop="133116" i_length="278"/>
          </intron>
          <exon e_serial="9" e_score="0.960">
            <gDNA_exon_boundary e_start="133117" e_stop="133265" e_length="149"/>
          </exon>
          <intron i_serial="9" don_prob="0.575" acc_prob="0.958">
            <gDNA_intron_boundary i_start="133266" i_stop="133342" i_length="77"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="133343" e_stop="133416" e_length="74"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129005" stop="129060"/>
              <exon start="129685" stop="129773"/>
              <exon start="130371" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132581"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567464" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130433" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132838"/>
              <exon start="133117" stop="133265"/>
              <exon start="133343" stop="133416"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E703408" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130436" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132647"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130462" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132838"/>
              <exon start="133117" stop="133191"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130474" stop="130557"/>
              <exon start="131470" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132838"/>
              <exon start="133117" stop="133174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602832" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131498" stop="131600"/>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132641"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440226" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131728" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132503" stop="132657"/>
              <exon start="132743" stop="132747"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264355" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTCATCTTCTCAGTTCAATAATCAATTGGTGAAGTTGGATTGTGAGTATTTACAT : ATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG : ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA : GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAG : GATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT : ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT : ACCAGGTGTTACTGCTGGTAAAGATGCTGGAATGGCAGTAGTTGCTGTACCATCTCTTGCAAAGCAGTCTCATCTTTATACCTCTGCTGATGAAGTGATCAATTCTCTTCTAGATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA : GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATATAGGTGGTCCTGTCATTAAGGGATTTGGGCGCGGCTCAAAGGTTCTCGGGATCCCCACAG : CTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCACATACAGAGAGACGGTT : GAACCATGGTTGCTTCATGACTTCAATGAGGACTTCTATGGTGAGGAATTGCATCTAGTTGTTGTGGGCTACAT</gDNA_template>
            <first_frame> L  H  L  L  S  S  I  I  N  W  *  S  W  I  V  S  I  Y  I :   *  L  L  S  M  S  V  E  R  T  F  K  K  L  V  S  G  V  I  L  D  L  D  G  T  L  L  N  T   : D  G  I  V  S  E  I  L  K  V  F  L  V  K  Y  G  K  Q  W  D  G  R  E  A  P  H  I  V  G  K  T  P  T  E  A  A  A  A  V  V  E  D  Y  G  L  P  L  S  R  D  E  F  L  S  Q  F  Y  P  M  L  S  D  Q :   W  R  N  I  K  A  L  P  G  A  N  R  L  I  N  H  L  S  G  H  G  V  P  M  A  L  A  S  N  S  S  K  S  N  I  E  A  K  I  F  H  H  A   : G  W  K  E  S  F  S  A  I  V  G  G  D  E  V  K  A  G  K  P  S  P  E  I :   F  L  E  A  A  K  R  L  N  M  D  P  S  S  F  L  V  I  E  D  S  I :   P  G  V  T  A  G  K  D  A  G  M  A  V  V  A  V  P  S  L  A  K  Q  S  H  L  Y  T  S  A  D  E  V  I  N  S  L  L  D  L  Q  L  E  K  W  G  L  P  A  F  Q  D   : R  I  E  G  T  L  P  L  E  P  W  Y  I  G  G  P  V  I  K  G  F  G  R  G  S  K  V  L  G  I  P  T   : A  N  L  S  P  Q  G  Y  S  A  I  L  S  E  H  P  A  G  V  Y  F  G  W  A  G  L  S  G  R  G  V  Y  K  M  V  M  S  I  G  W  N  P  F  F  T  Y  R  E  T  V  :  E  P  W  L  L  H  D  F  N  E  D  F  Y  G  E  E  L  H  L  V  V  V  G  Y   </first_frame>
            <second_frame>  F  I  F  S  V  Q  *  S  I  G  E  V  G  L  *  V  F  T   : Y  N  C  S  P  C  L  L  N  E  L  S  R  S  *  F  L  V  S  S  L  I  W  M  V  H  F  L  I  Q  :  M  A  L  *  V  R  F  *  R  F  S  *  L  S  M  E  S  N  G  M  G  E  K  L  P  T  *  *  G  K  P  Q  Q  K  L  L  L  P  L  L  K  I  M  G  C  H  C  Q  E  M  N  F  F  R  N  F  T  Q  C  C  L  I   : S  G  A  I  S  K  L  F  Q  G  P  I  D  *  L  T  I  *  A  V  M  V  Y  P  W  H  W  R  Q  I  L  L  N  L  T  L  R  P  K  F  F  I  M  Q  :  D  G  K  S  P  S  Q  L  L  L  E  E  M  K  *  K  L  E  S  R  L  R  K   : Y  F  L  K  Q  L  K  D  S  T  W  I  H  P  A  F  L  S  L  K  I  Q   : Y  Q  V  L  L  L  V  K  M  L  E  W  Q  *  L  L  Y  H  L  L  Q  S  S  L  I  F  I  P  L  L  M  K  *  S  I  L  F  *  I  C  N  *  K  S  G  D  Y  L  H  F  K  I  :  G  *  K  V  L  C  L  *  N  L  G  I  *  V  V  L  S  L  R  D  L  G  A  A  Q  R  F  S  G  S  P  Q  :  L  I  Y  P  H  K  V  I  Q  P  F  F  Q  N  I  Q  R  V  Y  I  L  D  G  Q  D  Y  Q  V  E  V  S  T  R  W  S  *  A  L  V  G  I  L  S  S  H  T  E  R  R  L :   N  H  G  C  F  M  T  S  M  R  T  S  M  V  R  N  C  I  *  L  L  W  A  T  </second_frame>
            <third_frame>   S  S  S  Q  F  N  N  Q  L  V  K  L  D  C  E  Y  L  H  :  I  I  A  L  H  V  C  *  T  N  F  Q  E  A  S  F  W  C  H  P  *  F  G  W  Y  T  S  *  Y  R :   W  H  C  E  *  D  F  K  G  F  L  S  *  V  W  K  A  M  G  W  E  R  S  S  P  H  S  R  E  N  P  N  R  S  C  C  C  R  C  *  R  L  W  A  A  T  V  K  R  *  I  S  F  A  I  L  P  N  A  V  *  S  :  V  A  Q  Y  Q  S  S  S  R  G  Q  S  I  D  *  P  F  E  R  S  W  C  T  H  G  I  G  V  K  F  F  *  I  *  H  *  G  Q  N  F  S  S  C  R :   M  E  R  V  L  L  S  Y  C  W  R  R  *  S  E  S  W  K  A  V  S  G  N  :  I  S  *  S  S  *  K  T  Q  H  G  S  I  Q  L  S  C  H  *  R  F  N  :  T  R  C  Y  C  W  *  R  C  W  N  G  S  S  C  C  T  I  S  C  K  A  V  S  S  L  Y  L  C  *  *  S  D  Q  F  S  S  R  F  A  T  R  K  V  G  T  T  C  I  S  R  * :   D  R  R  Y  F  A  F  R  T  L  V  Y  R  W  S  C  H  *  G  I  W  A  R  L  K  G  S  R  D  P  H  S :   *  F  I  P  T  R  L  F  S  H  S  F  R  T  S  S  G  C  I  F  W  M  G  R  T  I  R  S  R  C  L  Q  D  G  H  E  H  W  L  E  S  F  L  H  I  Q  R  D  G   : *  T  M  V  A  S  *  L  Q  *  G  L  L  W  *  G  I  A  S  S  C  C  G  L  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129689" stop="129773"/>
                    <exon start="130371" stop="130557"/>
                    <exon start="131470" stop="131600"/>
                    <exon start="131728" stop="131797"/>
                    <exon start="131889" stop="131954"/>
                    <exon start="132503" stop="132657"/>
                    <exon start="132743" stop="132838"/>
                    <exon start="133117" stop="133265"/>
                    <exon start="133343" stop="133414"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1011</number_coding_nucleotides>
                  <number_encoded_amino_acids>337</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLSMSVERTFKKLVSGVILDLDGTLLNTDGIVSEILKVFLVKYGKQWDGREAPHIVGKTPTEAAAAVVEDYGLPLSRDEFLSQFYPMLSDQWRNIKALPGANRLINHLSGHGVPMALASNSSKSNIEAKIFHHAGWKESFSAIVGGDEVKAGKPSPEIFLEAAKRLNMDPSSFLVIEDSIPGVTAGKDAGMAVVAVPSLAKQSHLYTSADEVINSLLDLQLEKWGLPAFQDRIEGTLPLEPWYIGGPVIKGFGRGSKVLGIPTANLSPQGYSAILSEHPAGVYFGWAGLSGRGVYKMVMSIGWNPFFTYRETVEPWLLHDFNEDFYGEELHLVVVGY</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="132825" e_stop="133339"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="132825" e_stop="133339" e_length="515"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132825" stop="133339"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236449" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132825" stop="133305"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E235635" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132825" stop="133301"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E231386" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="6" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGGGATCCCCACAGGTATGCGGTCTTCTTTATTCCTTCTGCTGAATGGCTAAAATAAATGCTTGACTCGTTATCTGTGTATACTTGAAATGACTTGAGAATTTCTCAGAAGTTTGTTATTGGAATTTCAGTTTCTTGTGAGCCTGTCATATCAGAGATATTGATTTTTATGTCAAATTATTATCTGGATTCGAACTCCAATTGTTGGAGGGGCATGGAAGATTAGTATCTTGCCTCGTATGACTTAACAGTGATGTGTTTTTCTATTCTTATGGGGTCAATATTCTTTTCAGCTAATTTATCCCCACAAGGTTATTCAGCCATTCTTTCAGAACATCCAGCGGGTGTATATTTTGGATGGGCAGGACTATCAGGTCGAGGTGTCTACAAGATGGTCATGAGCATTGGTTGGAATCCTTTCTTCACATACAGAGAGACGGTTGTAAGTGTGTCGTGACATATGTTTCTTCTGTATTCTTGACTTCTTTGGTGTTTGTTGAAAGACAACTTTACTTT</gDNA_template>
            <first_frame> R  D  P  H  R  Y  A  V  F  F  I  P  S  A  E  W  L  K  *  M  L  D  S  L  S  V  Y  T  *  N  D  L  R  I  S  Q  K  F  V  I  G  I  S  V  S  C  E  P  V  I  S  E  I  L  I  F  M  S  N  Y  Y  L  D  S  N  S  N  C  W  R  G  M  E  D  *  Y  L  A  S  Y  D  L  T  V  M  C  F  S  I  L  M  G  S  I  F  F  S  A  N  L  S  P  Q  G  Y  S  A  I  L  S  E  H  P  A  G  V  Y  F  G  W  A  G  L  S  G  R  G  V  Y  K  M  V  M  S  I  G  W  N  P  F  F  T  Y  R  E  T  V  V  S  V  S  *  H  M  F  L  L  Y  S  *  L  L  W  C  L  L  K  D  N  F  T   </first_frame>
            <second_frame>  G  I  P  T  G  M  R  S  S  L  F  L  L  L  N  G  *  N  K  C  L  T  R  Y  L  C  I  L  E  M  T  *  E  F  L  R  S  L  L  L  E  F  Q  F  L  V  S  L  S  Y  Q  R  Y  *  F  L  C  Q  I  I  I  W  I  R  T  P  I  V  G  G  A  W  K  I  S  I  L  P  R  M  T  *  Q  *  C  V  F  L  F  L  W  G  Q  Y  S  F  Q  L  I  Y  P  H  K  V  I  Q  P  F  F  Q  N  I  Q  R  V  Y  I  L  D  G  Q  D  Y  Q  V  E  V  S  T  R  W  S  *  A  L  V  G  I  L  S  S  H  T  E  R  R  L  *  V  C  R  D  I  C  F  F  C  I  L  D  F  F  G  V  C  *  K  T  T  L  L  </second_frame>
            <third_frame>   G  S  P  Q  V  C  G  L  L  Y  S  F  C  *  M  A  K  I  N  A  *  L  V  I  C  V  Y  L  K  *  L  E  N  F  S  E  V  C  Y  W  N  F  S  F  L  *  A  C  H  I  R  D  I  D  F  Y  V  K  L  L  S  G  F  E  L  Q  L  L  E  G  H  G  R  L  V  S  C  L  V  *  L  N  S  D  V  F  F  Y  S  Y  G  V  N  I  L  F  S  *  F  I  P  T  R  L  F  S  H  S  F  R  T  S  S  G  C  I  F  W  M  G  R  T  I  R  S  R  C  L  Q  D  G  H  E  H  W  L  E  S  F  L  H  I  Q  R  D  G  C  K  C  V  V  T  Y  V  S  S  V  F  L  T  S  L  V  F  V  E  R  Q  L  Y  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="133050" stop="133280"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YLASYDLTVMCFSILMGSIFFSANLSPQGYSAILSEHPAGVYFGWAGLSGRGVYKMVMSIGWNPFFTYRETVVSVS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="6" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="133121" stop="133339"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FIPTRLFSHSFRTSSGCIFWMGRTIRSRCLQDGHEHWLESFLHIQRDGCKCVVTYVSSVFLTSLVFVERQLYF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="130362" e_stop="130557"/>
            <exon e_start="131470" e_stop="131797"/>
            <exon e_start="131889" e_stop="131954"/>
            <exon e_start="132616" e_stop="132657"/>
            <exon e_start="132743" e_stop="132778"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.764" acc_prob="0.996" e_score="0.969"/>
          <exon-intron don_prob="0.968" acc_prob="0.686" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.903" acc_prob="0.905" e_score="0.976"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="130362" e_stop="130557" e_length="196"/>
          </exon>
          <intron i_serial="1" don_prob="0.764" acc_prob="0.996">
            <gDNA_intron_boundary i_start="130558" i_stop="131469" i_length="912"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="131470" e_stop="131797" e_length="328"/>
          </exon>
          <intron i_serial="2" don_prob="0.968" acc_prob="0.686">
            <gDNA_intron_boundary i_start="131798" i_stop="131888" i_length="91"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="131889" e_stop="131954" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.000">
            <gDNA_intron_boundary i_start="131955" i_stop="132615" i_length="661"/>
          </intron>
          <exon e_serial="4" e_score="0.976">
            <gDNA_exon_boundary e_start="132616" e_stop="132657" e_length="42"/>
          </exon>
          <intron i_serial="4" don_prob="0.903" acc_prob="0.905">
            <gDNA_intron_boundary i_start="132658" i_stop="132742" i_length="85"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="132743" e_stop="132778" e_length="36"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130362" stop="130557"/>
              <exon start="131470" stop="131577"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273774" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131541" stop="131797"/>
              <exon start="131889" stop="131954"/>
              <exon start="132616" stop="132657"/>
              <exon start="132743" stop="132778"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243460" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="7" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCTGACAGATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCA : GTGGCGCAATATCAAAGCTCTTCCAGGGGCCAATCGATTGATTAACCATTTGAGCGGTCATGGTGTACCCATGGCATTGGCGTCAAATTCTTCTAAATCTAACATTGAGGCCAAAATTTTTCATCATGCAGGTAGAGTTCTAACATGTATTGCTAGAGAGGTATTTCTTTCCTTAGGAAGGTATTTTGTGCCAGTCCAGCATGTAAGATGGCATTTATGCTTGGTGCTTTGATTGGGATAGTCTTTATTTTTTTTCAGGATGGAAAGAGTCCTTCTCAGCTATTGTTGGAGGAGATGAAGTGAAAGCTGGAAAGCCGTCTCCGGAAAT : ATTTCTTGAAGCAGCTAAAAGACTCAACATGGATCCATCCAGCTTTCTTGTCATTGAAGATTCAAT : ATTTGCAACTAGAAAAGTGGGGACTACCTGCATTTCAAGATA : GGATAGAAGGTACTTTGCCTTTAGAACCTTGGTATA</gDNA_template>
            <first_frame> F  *  Q  M  A  L  *  V  R  F  *  R  F  S  *  L  S  M  E  S  N  G  M  G  E  K  L  P  T  *  *  G  K  P  Q  Q  K  L  L  L  P  L  L  K  I  M  G  C  H  C  Q  E  M  N  F  F  R  N  F  T  Q  C  C  L  I   : S  G  A  I  S  K  L  F  Q  G  P  I  D  *  L  T  I  *  A  V  M  V  Y  P  W  H  W  R  Q  I  L  L  N  L  T  L  R  P  K  F  F  I  M  Q  V  E  F  *  H  V  L  L  E  R  Y  F  F  P  *  E  G  I  L  C  Q  S  S  M  *  D  G  I  Y  A  W  C  F  D  W  D  S  L  Y  F  F  S  G  W  K  E  S  F  S  A  I  V  G  G  D  E  V  K  A  G  K  P  S  P  E  I :   F  L  E  A  A  K  R  L  N  M  D  P  S  S  F  L  V  I  E  D  S  I :   F  A  T  R  K  V  G  T  T  C  I  S  R  * :   D  R  R  Y  F  A  F  R  T  L  V   </first_frame>
            <second_frame>  S  D  R  W  H  C  E  *  D  F  K  G  F  L  S  *  V  W  K  A  M  G  W  E  R  S  S  P  H  S  R  E  N  P  N  R  S  C  C  C  R  C  *  R  L  W  A  A  T  V  K  R  *  I  S  F  A  I  L  P  N  A  V  *  S  :  V  A  Q  Y  Q  S  S  S  R  G  Q  S  I  D  *  P  F  E  R  S  W  C  T  H  G  I  G  V  K  F  F  *  I  *  H  *  G  Q  N  F  S  S  C  R  *  S  S  N  M  Y  C  *  R  G  I  S  F  L  R  K  V  F  C  A  S  P  A  C  K  M  A  F  M  L  G  A  L  I  G  I  V  F  I  F  F  Q  D  G  K  S  P  S  Q  L  L  L  E  E  M  K  *  K  L  E  S  R  L  R  K   : Y  F  L  K  Q  L  K  D  S  T  W  I  H  P  A  F  L  S  L  K  I  Q   : Y  L  Q  L  E  K  W  G  L  P  A  F  Q  D   : R  I  E  G  T  L  P  L  E  P  W  Y  </second_frame>
            <third_frame>   L  T  D  G  I  V  S  E  I  L  K  V  F  L  V  K  Y  G  K  Q  W  D  G  R  E  A  P  H  I  V  G  K  T  P  T  E  A  A  A  A  V  V  E  D  Y  G  L  P  L  S  R  D  E  F  L  S  Q  F  Y  P  M  L  S  D  Q :   W  R  N  I  K  A  L  P  G  A  N  R  L  I  N  H  L  S  G  H  G  V  P  M  A  L  A  S  N  S  S  K  S  N  I  E  A  K  I  F  H  H  A  G  R  V  L  T  C  I  A  R  E  V  F  L  S  L  G  R  Y  F  V  P  V  Q  H  V  R  W  H  L  C  L  V  L  *  L  G  *  S  L  F  F  F  R  M  E  R  V  L  L  S  Y  C  W  R  R  *  S  E  S  W  K  A  V  S  G  N  :  I  S  *  S  S  *  K  T  Q  H  G  S  I  Q  L  S  C  H  *  R  F  N  :  I  C  N  *  K  S  G  D  Y  L  H  F  K  I  :  G  *  K  V  L  C  L  *  N  L  G  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="130364" stop="130557"/>
                    <exon start="131470" stop="131701"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>423</number_coding_nucleotides>
                  <number_encoded_amino_acids>141</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTDGIVSEILKVFLVKYGKQWDGREAPHIVGKTPTEAAAAVVEDYGLPLSRDEFLSQFYPMLSDQWRNIKALPGANRLINHLSGHGVPMALASNSSKSNIEAKIFHHAGRVLTCIAREVFLSLGRYFVPVQHVRWHLCLVL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="7" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="131676" stop="131797"/>
                    <exon start="131889" stop="131954"/>
                    <exon start="132616" stop="132743"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DGIYAWCFDWDSLYFFSGWKESFSAIVGGDEVKAGKPSPEIFLEAAKRLNMDPSSFLVIEDSIFATRKVGTTCISR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="8">
          <exon_coordinates>
            <exon e_start="129664" e_stop="129773"/>
            <exon e_start="130371" e_stop="130807"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.967" e_score="0.936"/>
          <exon-only e_score="0.924"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.936">
            <gDNA_exon_boundary e_start="129664" e_stop="129773" e_length="110"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.967">
            <gDNA_intron_boundary i_start="129774" i_stop="130370" i_length="597"/>
          </intron>
          <exon e_serial="2" e_score="0.924">
            <gDNA_exon_boundary e_start="130371" e_stop="130807" e_length="437"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129664" stop="129773"/>
              <exon start="130371" stop="130807"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E569374" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="8" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTATCTGTTTCTGTGTGGCAGATAATTGCTCTCCATGTCTGTTGAACGAACTTTCAAGAAGCTAGTTTCTGGTGTCATCCTTGATTTGGATGGTACACTTCTTAATACAG : ATGGCATTGTGAGTGAGATTTTAAAGGTTTTCTTAGTTAAGTATGGAAAGCAATGGGATGGGAGAGAAGCTCCCCACATAGTAGGGAAAACCCCAACAGAAGCTGCTGCTGCCGTTGTTGAAGATTATGGGCTGCCACTGTCAAGAGATGAATTTCTTTCGCAATTTTACCCAATGCTGTCTGATCAGTAATAAACCAGCAAACATAGTTTCATTTCCTTTCTGTTTATTGATAAGGCTTATACAAACTGAAATTGAATAACCCATGGGAAGATTATTCGACTTAAAATATTAGTAGGCGGATTCTTTTCGTCATATCCTATTTATGGATGTTAAAGGATAAAGTTACAAATTAAAAACCTTCTGCTCTTTTATAGCTGGAGCATGGATGATAAATTGCAAGCGAGTTAGTAGATAAAAGAGTTGTGGACAACATAG</gDNA_template>
            <first_frame> V  S  V  S  V  W  Q  I  I  A  L  H  V  C  *  T  N  F  Q  E  A  S  F  W  C  H  P  *  F  G  W  Y  T  S  *  Y  R :   W  H  C  E  *  D  F  K  G  F  L  S  *  V  W  K  A  M  G  W  E  R  S  S  P  H  S  R  E  N  P  N  R  S  C  C  C  R  C  *  R  L  W  A  A  T  V  K  R  *  I  S  F  A  I  L  P  N  A  V  *  S  V  I  N  Q  Q  T  *  F  H  F  L  S  V  Y  *  *  G  L  Y  K  L  K  L  N  N  P  W  E  D  Y  S  T  *  N  I  S  R  R  I  L  F  V  I  S  Y  L  W  M  L  K  D  K  V  T  N  *  K  P  S  A  L  L  *  L  E  H  G  *  *  I  A  S  E  L  V  D  K  R  V  V  D  N  I  </first_frame>
            <second_frame>  Y  L  F  L  C  G  R  *  L  L  S  M  S  V  E  R  T  F  K  K  L  V  S  G  V  I  L  D  L  D  G  T  L  L  N  T   : D  G  I  V  S  E  I  L  K  V  F  L  V  K  Y  G  K  Q  W  D  G  R  E  A  P  H  I  V  G  K  T  P  T  E  A  A  A  A  V  V  E  D  Y  G  L  P  L  S  R  D  E  F  L  S  Q  F  Y  P  M  L  S  D  Q  *  *  T  S  K  H  S  F  I  S  F  L  F  I  D  K  A  Y  T  N  *  N  *  I  T  H  G  K  I  I  R  L  K  I  L  V  G  G  F  F  S  S  Y  P  I  Y  G  C  *  R  I  K  L  Q  I  K  N  L  L  L  F  Y  S  W  S  M  D  D  K  L  Q  A  S  *  *  I  K  E  L  W  T  T  * </second_frame>
            <third_frame>   I  C  F  C  V  A  D  N  C  S  P  C  L  L  N  E  L  S  R  S  *  F  L  V  S  S  L  I  W  M  V  H  F  L  I  Q  :  M  A  L  *  V  R  F  *  R  F  S  *  L  S  M  E  S  N  G  M  G  E  K  L  P  T  *  *  G  K  P  Q  Q  K  L  L  L  P  L  L  K  I  M  G  C  H  C  Q  E  M  N  F  F  R  N  F  T  Q  C  C  L  I  S  N  K  P  A  N  I  V  S  F  P  F  C  L  L  I  R  L  I  Q  T  E  I  E  *  P  M  G  R  L  F  D  L  K  Y  *  *  A  D  S  F  R  H  I  L  F  M  D  V  K  G  *  S  Y  K  L  K  T  F  C  S  F  I  A  G  A  W  M  I  N  C  K  R  V  S  R  *  K  S  C  G  Q  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="8" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129689" stop="129773"/>
                    <exon start="130371" stop="130561"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLSMSVERTFKKLVSGVILDLDGTLLNTDGIVSEILKVFLVKYGKQWDGREAPHIVGKTPTEAAAAVVEDYGLPLSRDEFLSQFYPMLSDQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="134461" PGL_stop="140717"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="134461" e_stop="134617"/>
            <exon e_start="134720" e_stop="134782"/>
            <exon e_start="135270" e_stop="135325"/>
            <exon e_start="135506" e_stop="135586"/>
            <exon e_start="135668" e_stop="135741"/>
            <exon e_start="135895" e_stop="135977"/>
            <exon e_start="136445" e_stop="136551"/>
            <exon e_start="136825" e_stop="136967"/>
            <exon e_start="137062" e_stop="137109"/>
            <exon e_start="139411" e_stop="139463"/>
            <exon e_start="139877" e_stop="139961"/>
            <exon e_start="140046" e_stop="140112"/>
            <exon e_start="140198" e_stop="140308"/>
            <exon e_start="140629" e_stop="140717"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.672" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.911" acc_prob="0.686" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.634" e_score="0.976"/>
          <exon-intron don_prob="1.000" acc_prob="0.447" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.771" e_score="0.972"/>
          <exon-intron don_prob="0.997" acc_prob="0.844" e_score="1.000"/>
          <exon-intron don_prob="0.873" acc_prob="0.352" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.890" e_score="0.976"/>
          <exon-intron don_prob="0.321" acc_prob="0.608" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.993" e_score="0.982"/>
          <exon-only e_score="0.921"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="134461" e_stop="134617" e_length="157"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.971">
            <gDNA_intron_boundary i_start="134618" i_stop="134719" i_length="102"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="134720" e_stop="134782" e_length="63"/>
          </exon>
          <intron i_serial="2" don_prob="0.672" acc_prob="0.994">
            <gDNA_intron_boundary i_start="134783" i_stop="135269" i_length="487"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="135270" e_stop="135325" e_length="56"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="135326" i_stop="135505" i_length="180"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="135506" e_stop="135586" e_length="81"/>
          </exon>
          <intron i_serial="4" don_prob="0.911" acc_prob="0.686">
            <gDNA_intron_boundary i_start="135587" i_stop="135667" i_length="81"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="135668" e_stop="135741" e_length="74"/>
          </exon>
          <intron i_serial="5" don_prob="0.985" acc_prob="0.996">
            <gDNA_intron_boundary i_start="135742" i_stop="135894" i_length="153"/>
          </intron>
          <exon e_serial="6" e_score="0.976">
            <gDNA_exon_boundary e_start="135895" e_stop="135977" e_length="83"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.634">
            <gDNA_intron_boundary i_start="135978" i_stop="136444" i_length="467"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="136445" e_stop="136551" e_length="107"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.447">
            <gDNA_intron_boundary i_start="136552" i_stop="136824" i_length="273"/>
          </intron>
          <exon e_serial="8" e_score="0.972">
            <gDNA_exon_boundary e_start="136825" e_stop="136967" e_length="143"/>
          </exon>
          <intron i_serial="8" don_prob="0.996" acc_prob="0.771">
            <gDNA_intron_boundary i_start="136968" i_stop="137061" i_length="94"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="137062" e_stop="137109" e_length="48"/>
          </exon>
          <intron i_serial="9" don_prob="0.997" acc_prob="0.844">
            <gDNA_intron_boundary i_start="137110" i_stop="139410" i_length="2301"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="139411" e_stop="139463" e_length="53"/>
          </exon>
          <intron i_serial="10" don_prob="0.873" acc_prob="0.352">
            <gDNA_intron_boundary i_start="139464" i_stop="139876" i_length="413"/>
          </intron>
          <exon e_serial="11" e_score="0.976">
            <gDNA_exon_boundary e_start="139877" e_stop="139961" e_length="85"/>
          </exon>
          <intron i_serial="11" don_prob="0.998" acc_prob="0.890">
            <gDNA_intron_boundary i_start="139962" i_stop="140045" i_length="84"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="140046" e_stop="140112" e_length="67"/>
          </exon>
          <intron i_serial="12" don_prob="0.321" acc_prob="0.608">
            <gDNA_intron_boundary i_start="140113" i_stop="140197" i_length="85"/>
          </intron>
          <exon e_serial="13" e_score="0.982">
            <gDNA_exon_boundary e_start="140198" e_stop="140308" e_length="111"/>
          </exon>
          <intron i_serial="13" don_prob="0.995" acc_prob="0.993">
            <gDNA_intron_boundary i_start="140309" i_stop="140628" i_length="320"/>
          </intron>
          <exon e_serial="14" e_score="0.921">
            <gDNA_exon_boundary e_start="140629" e_stop="140717" e_length="89"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="134461" stop="134617"/>
              <exon start="134720" stop="134782"/>
              <exon start="135270" stop="135325"/>
              <exon start="135506" stop="135586"/>
              <exon start="135668" stop="135741"/>
              <exon start="135895" stop="135921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238443" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="134519" stop="134617"/>
              <exon start="134720" stop="134782"/>
              <exon start="135270" stop="135325"/>
              <exon start="135506" stop="135586"/>
              <exon start="135668" stop="135741"/>
              <exon start="135895" stop="135977"/>
              <exon start="136445" stop="136551"/>
              <exon start="136825" stop="136881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E367164" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136453" stop="136551"/>
              <exon start="136825" stop="136967"/>
              <exon start="137062" stop="137109"/>
              <exon start="139411" stop="139463"/>
              <exon start="139877" stop="139961"/>
              <exon start="140046" stop="140112"/>
              <exon start="140198" stop="140308"/>
              <exon start="140629" stop="140717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572087" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGGAAACCCCTATTGAAGCTGTAGAAGAGAAACCATCGGAAGAACCTTACCCTTGGCCGGTTATTCAGTATGATGTTCCGCCGTATCTAACCTATCATTTCTTCAATCAGTTCAGGACGCCTTCAAACCCTAATAATTTCTTAAAGGGTGTCAAATG : GTCTCCTGATGGTTCTGGTTTCCTCACTTGCTCTGATGATAATACCTTTTGTTTATATAACTT : GCCATATGATGAAAGTGGACAGCTTGCTGATTTTTCCTCATCAGCTGCTGATACAG : ATTCGTATGCTGCAAGTCTTGTCATGAGTGACGGGGAGTCTGTATATGACTATTGCTGGTATCCCTATATGTCTTCTTCAA : GTCCAGAGACATGTGTTTTTGCAAGTACTACCCGTGATCACCCTATTCATCTCTGGGATGCTACTACTGGACAG : TTACGTTGTACATACCGTGCTTATGATGCCATGGACGAGATCACTGCTGCCTTTTCAATTGCCTTCAATCCCGCAGGGACTAA : GATATTTGCTGGTTACAACAAATCCATAAGAATATTTGATATTCATCGGCCTGGCAGAGATTTTACCCAGCACTCCACCCTTCAAGGAAATAAAGAAGGGCAATCAG : GAATTATATCCTCAATGGCTTTCTGTCCAAGCCATTCAGGGTTATTGGCAACTGGCTCATATAGCCAAACTACTGCCATACATAGGGAAGATAACATGGAACTTCTCTATGTCTTGCATGGTCAAGAAGGTGGGGTTACACAT : GTCCAATTCTCAAAAGACGGAAACTACTTGTACACTGGTGGCCGGAAG : GACCCTTACATACTGTGCTGGGACATTCGGAAGACTGCTGAAATTGTTTACAA : GATGTACAGATCATCAGAAACTACCAATCAGCGGATATATTTTGATATTGAACCTCGAGGTCAGCATCTCGGCTCCGGAGGACAG : GATGGCTCAGTTCACATTTATAATCTTCAAACCGGACAGTGGGTATCCAGCTTCCGAGCTGCATCAG : ACACGGTTAATGGCTTTTCATTTCATCCTTTCCTGCCGATGGCTGCCTCTTCATCAGGCCAACGGAGATTTGGAGTTATAGATGACTCCCACGAGGATATGCTCCTTACAG : GTGATGAAAATTGTGTTTCTGTGTGGAGCTTCGCCTATTCAGCATCTGTAGAAAATGATGTTAGTCCCATTTCCGGGGTCTCAAATGGT</gDNA_template>
            <first_frame> R  K  P  L  L  K  L  *  K  R  N  H  R  K  N  L  T  L  G  R  L  F  S  M  M  F  R  R  I  *  P  I  I  S  S  I  S  S  G  R  L  Q  T  L  I  I  S  *  R  V  S  N   : G  L  L  M  V  L  V  S  S  L  A  L  M  I  I  P  F  V  Y  I  T   : C  H  M  M  K  V  D  S  L  L  I  F  P  H  Q  L  L  I  Q  :  I  R  M  L  Q  V  L  S  *  V  T  G  S  L  Y  M  T  I  A  G  I  P  I  C  L  L  Q  :  V  Q  R  H  V  F  L  Q  V  L  P  V  I  T  L  F  I  S  G  M  L  L  L  D  S :   Y  V  V  H  T  V  L  M  M  P  W  T  R  S  L  L  P  F  Q  L  P  S  I  P  Q  G  L   : R  Y  L  L  V  T  T  N  P  *  E  Y  L  I  F  I  G  L  A  E  I  L  P  S  T  P  P  F  K  E  I  K  K  G  N  Q  :  E  L  Y  P  Q  W  L  S  V  Q  A  I  Q  G  Y  W  Q  L  A  H  I  A  K  L  L  P  Y  I  G  K  I  T  W  N  F  S  M  S  C  M  V  K  K  V  G  L  H  M :   S  N  S  Q  K  T  E  T  T  C  T  L  V  A  G  R :   T  L  T  Y  C  A  G  T  F  G  R  L  L  K  L  F  T   : R  C  T  D  H  Q  K  L  P  I  S  G  Y  I  L  I  L  N  L  E  V  S  I  S  A  P  E  D  R :   M  A  Q  F  T  F  I  I  F  K  P  D  S  G  Y  P  A  S  E  L  H  Q  :  T  R  L  M  A  F  H  F  I  L  S  C  R  W  L  P  L  H  Q  A  N  G  D  L  E  L  *  M  T  P  T  R  I  C  S  L  Q  :  V  M  K  I  V  F  L  C  G  A  S  P  I  Q  H  L  *  K  M  M  L  V  P  F  P  G  S  Q  M   </first_frame>
            <second_frame>  G  N  P  Y  *  S  C  R  R  E  T  I  G  R  T  L  P  L  A  G  Y  S  V  *  C  S  A  V  S  N  L  S  F  L  Q  S  V  Q  D  A  F  K  P  *  *  F  L  K  G  C  Q  M  :  V  S  *  W  F  W  F  P  H  L  L  *  *  *  Y  L  L  F  I  *  L  :  A  I  *  *  K  W  T  A  C  *  F  F  L  I  S  C  *  Y  R :   F  V  C  C  K  S  C  H  E  *  R  G  V  C  I  *  L  L  L  V  S  L  Y  V  F  F  K :   S  R  D  M  C  F  C  K  Y  Y  P  *  S  P  Y  S  S  L  G  C  Y  Y  W  T   : V  T  L  Y  I  P  C  L  *  C  H  G  R  D  H  C  C  L  F  N  C  L  Q  S  R  R  D  *  :  D  I  C  W  L  Q  Q  I  H  K  N  I  *  Y  S  S  A  W  Q  R  F  Y  P  A  L  H  P  S  R  K  *  R  R  A  I  R :   N  Y  I  L  N  G  F  L  S  K  P  F  R  V  I  G  N  W  L  I  *  P  N  Y  C  H  T  *  G  R  *  H  G  T  S  L  C  L  A  W  S  R  R  W  G  Y  T   : C  P  I  L  K  R  R  K  L  L  V  H  W  W  P  E   : G  P  L  H  T  V  L  G  H  S  E  D  C  *  N  C  L  Q  :  D  V  Q  I  I  R  N  Y  Q  S  A  D  I  F  *  Y  *  T  S  R  S  A  S  R  L  R  R  T   : G  W  L  S  S  H  L  *  S  S  N  R  T  V  G  I  Q  L  P  S  C  I  R :   H  G  *  W  L  F  I  S  S  F  P  A  D  G  C  L  F  I  R  P  T  E  I  W  S  Y  R  *  L  P  R  G  Y  A  P  Y  R :   *  *  K  L  C  F  C  V  E  L  R  L  F  S  I  C  R  K  *  C  *  S  H  F  R  G  L  K  W  </second_frame>
            <third_frame>   E  T  P  I  E  A  V  E  E  K  P  S  E  E  P  Y  P  W  P  V  I  Q  Y  D  V  P  P  Y  L  T  Y  H  F  F  N  Q  F  R  T  P  S  N  P  N  N  F  L  K  G  V  K  W :   S  P  D  G  S  G  F  L  T  C  S  D  D  N  T  F  C  L  Y  N  L :   P  Y  D  E  S  G  Q  L  A  D  F  S  S  S  A  A  D  T   : D  S  Y  A  A  S  L  V  M  S  D  G  E  S  V  Y  D  Y  C  W  Y  P  Y  M  S  S  S   : S  P  E  T  C  V  F  A  S  T  T  R  D  H  P  I  H  L  W  D  A  T  T  G  Q  :  L  R  C  T  Y  R  A  Y  D  A  M  D  E  I  T  A  A  F  S  I  A  F  N  P  A  G  T  K :   I  F  A  G  Y  N  K  S  I  R  I  F  D  I  H  R  P  G  R  D  F  T  Q  H  S  T  L  Q  G  N  K  E  G  Q  S   : G  I  I  S  S  M  A  F  C  P  S  H  S  G  L  L  A  T  G  S  Y  S  Q  T  T  A  I  H  R  E  D  N  M  E  L  L  Y  V  L  H  G  Q  E  G  G  V  T  H  :  V  Q  F  S  K  D  G  N  Y  L  Y  T  G  G  R  K  :  D  P  Y  I  L  C  W  D  I  R  K  T  A  E  I  V  Y  K :   M  Y  R  S  S  E  T  T  N  Q  R  I  Y  F  D  I  E  P  R  G  Q  H  L  G  S  G  G  Q  :  D  G  S  V  H  I  Y  N  L  Q  T  G  Q  W  V  S  S  F  R  A  A  S   : D  T  V  N  G  F  S  F  H  P  F  L  P  M  A  A  S  S  S  G  Q  R  R  F  G  V  I  D  D  S  H  E  D  M  L  L  T   : G  D  E  N  C  V  S  V  W  S  F  A  Y  S  A  S  V  E  N  D  V  S  P  I  S  G  V  S  N  G </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C02SLm0114O11.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="134463" stop="134617"/>
                    <exon start="134720" stop="134782"/>
                    <exon start="135270" stop="135325"/>
                    <exon start="135506" stop="135586"/>
                    <exon start="135668" stop="135741"/>
                    <exon start="135895" stop="135977"/>
                    <exon start="136445" stop="136551"/>
                    <exon start="136825" stop="136967"/>
                    <exon start="137062" stop="137109"/>
                    <exon start="139411" stop="139463"/>
                    <exon start="139877" stop="139961"/>
                    <exon start="140046" stop="140112"/>
                    <exon start="140198" stop="140308"/>
                    <exon start="140629" stop="140717"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1215</number_coding_nucleotides>
                  <number_encoded_amino_acids>405</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ETPIEAVEEKPSEEPYPWPVIQYDVPPYLTYHFFNQFRTPSNPNNFLKGVKWSPDGSGFLTCSDDNTFCLYNLPYDESGQLADFSSSAADTDSYAASLVMSDGESVYDYCWYPYMSSSSPETCVFASTTRDHPIHLWDATTGQLRCTYRAYDAMDEITAAFSIAFNPAGTKIFAGYNKSIRIFDIHRPGRDFTQHSTLQGNKEGQSGIISSMAFCPSHSGLLATGSYSQTTAIHREDNMELLYVLHGQEGGVTHVQFSKDGNYLYTGGRKDPYILCWDIRKTAEIVYKMYRSSETTNQRIYFDIEPRGQHLGSGGQDGSVHIYNLQTGQWVSSFRAASDTVNGFSFHPFLPMAASSSGQRRFGVIDDSHEDMLLTGDENCVSVWSFAYSASVENDVSPISGVSNG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="146663" PGL_stop="147079"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="146663" e_stop="147079"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.902"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.902">
            <gDNA_exon_boundary e_start="146663" e_stop="147079" e_length="417"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="146663" stop="147079"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443600" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTTGTAATAAATTACAATTTCAATTTACAACTATTAGTAGAGTACATAGCTTACGCAGCCACCTTCTAGGAAGGGTTCTGTTTCAACTATGTCTCGAATGTAATATTAATAGTTGTATAGTCCCGTAAATCCTCTTTCTAACTCAGCTATGGATTGATTGTGATCAACTTCTGGTCTTGGTAAAGCTCGTTGACGATCTTGAATTTCGATGCCATCATCACTACCATATCCAATAGCTGAATCTATGAAAAGTTCAAATTGACTATCTAACTTTGGAAGTCCTTGATTTCTACGCTCAGCATTTATCCAGTCTCTAAATAACACTGATATCTCCAGGGTGTGTTCTGCTAACGAATATCTGTGGTCTCCAATTTGAAATCTTGTCGCGCTGAAAGCTGCCTCCGAAGCTACTGAT</gDNA_template>
            <first_frame> N  L  *  *  I  T  I  S  I  Y  N  Y  *  *  S  T  *  L  T  Q  P  P  S  R  K  G  S  V  S  T  M  S  R  M  *  Y  *  *  L  Y  S  P  V  N  P  L  S  N  S  A  M  D  *  L  *  S  T  S  G  L  G  K  A  R  *  R  S  *  I  S  M  P  S  S  L  P  Y  P  I  A  E  S  M  K  S  S  N  *  L  S  N  F  G  S  P  *  F  L  R  S  A  F  I  Q  S  L  N  N  T  D  I  S  R  V  C  S  A  N  E  Y  L  W  S  P  I  *  N  L  V  A  L  K  A  A  S  E  A  T  D </first_frame>
            <second_frame>  I  C  N  K  L  Q  F  Q  F  T  T  I  S  R  V  H  S  L  R  S  H  L  L  G  R  V  L  F  Q  L  C  L  E  C  N  I  N  S  C  I  V  P  *  I  L  F  L  T  Q  L  W  I  D  C  D  Q  L  L  V  L  V  K  L  V  D  D  L  E  F  R  C  H  H  H  Y  H  I  Q  *  L  N  L  *  K  V  Q  I  D  Y  L  T  L  E  V  L  D  F  Y  A  Q  H  L  S  S  L  *  I  T  L  I  S  P  G  C  V  L  L  T  N  I  C  G  L  Q  F  E  I  L  S  R  *  K  L  P  P  K  L  L   </second_frame>
            <third_frame>   F  V  I  N  Y  N  F  N  L  Q  L  L  V  E  Y  I  A  Y  A  A  T  F  *  E  G  F  C  F  N  Y  V  S  N  V  I  L  I  V  V  *  S  R  K  S  S  F  *  L  S  Y  G  L  I  V  I  N  F  W  S  W  *  S  S  L  T  I  L  N  F  D  A  I  I  T  T  I  S  N  S  *  I  Y  E  K  F  K  L  T  I  *  L  W  K  S  L  I  S  T  L  S  I  Y  P  V  S  K  *  H  *  Y  L  Q  G  V  F  C  *  R  I  S  V  V  S  N  L  K  S  C  R  A  E  S  C  L  R  S  Y  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C02SLm0114O11.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 285 chains have been computed
$ 
$ memory statistics:
$ 531024 bytes spliced alignments in total
$ 170 spliced alignments have been stored
$ 3123 bytes was the average size of a spliced alignment
$ 31832 bytes predicted gene locations in total
$ 15 predicted gene locations have been stored
$ 2122 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 333 backtrace matrices have been allocated
$ 
$ date finished: 2009-12-01 11:51:39
-->
